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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
10705 | 740 | 427 | Q92499(DDX1_HUMAN) | RecName: Full=ATP-dependent RNA helicase DDX1; EC=3.6.4.13 ;AltName: Full=DEAD box protein 1;AltName: Full=DEAD box protein retinoblastoma; Short=DBP-RB; |
QUERYSEQ |
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWS TMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF |
740 | region | name | description |
1-740 | CHAIN | /note="ATP-dependent RNA helicase DDX1" /id="PRO_0000054986" | |
2-428 | DOMAIN | /note="Helicase ATP-binding" | |
70-247 | DOMAIN | /note="B30.2/SPRY" | |
493-681 | DOMAIN | /note="Helicase C-terminal" | |
1-525 | REGION | /note="Necessary for interaction with RELA" | |
1-448 | REGION | /note="Interaction with dsRNA" | |
1-295 | REGION | /note="Necessary for interaction with HNRNPK" | |
525-740 | REGION | /note="Necessary for interaction with HNRNPK" | |
536-631 | REGION | /note="Necessary for interaction with replicase polyprotein 1ab nsp14 of IBV" | |
46-53 | BINDING | /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616" | |
1-718 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
740 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
8tbx | A | 100.0 | DDX1_HUMAN DDX1_HUMAN ATP-dependent RNA helicase DDX1 | ||||
4xw3 | B | 100.0 | A3RJH1_HUMAN ATP-dependent RNA helicase DDX1 | ||||
4kbf | A | 37.1 | Q72GF3_THET2 Heat resistant RNA dependent ATPase | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
740 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6elz[2] | FA | CIC1_YEAST Proteasome-interacting protein CIC1[257 aa] | HA | 0.0 /44.3 |
1 /15 |
HAS1_YEAST ATP-dependent RNA helicase HAS1 | |
5nt7[2] | B | OSKA_DROME Maternal effect protein oskar[92 aa] | A | 34.8 /40.2 |
23 /23 |
VASA1_DROME ATP-dependent RNA helicase vasa, isoform A | |
6f9s[2] | B | Q9XW17_CAEEL Cytokinesis, Apoptosis, RNA-associated[43 aa] | A | 25.0 /39.6 |
8 /28 |
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 | |
6f9s[2] | B | Q9XW17_CAEEL Cytokinesis, Apoptosis, RNA-associated[43 aa] | A | 33.3 /39.6 |
3 /3 |
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 | |
8esq[4] | AB | NOP16_SCHPO Nucleolar protein 16[161 aa] | J | 0.0 /38.9 |
2 /8 |
HAS1_SCHPO ATP-dependent RNA helicase has1 | |
8esq[7] | NA | RL36B_SCHPO 60S ribosomal protein L36-B[85 aa] | J | 14.3 /38.9 |
7 /8 |
HAS1_SCHPO ATP-dependent RNA helicase has1 | |
8euy[1] | Q | RL13_SCHPO 60S ribosomal protein L13[116 aa] | J | 0.0 /39.4 |
1 /1 |
HAS1_SCHPO ATP-dependent RNA helicase has1 | |
8c6j[1] | IA | DHX8_HUMAN ATP-dependent RNA helicase DHX8[934 aa] | L | 33.3 /38.9 |
3 /3 |
DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 | |
8fkp[10] | LA | RL1D1_HUMAN Ribosomal L1 domain-containing protein 1[243 aa] | TA | 0.0 /38.7 |
1 /14 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fkp[10] | T | RL36_HUMAN 60S ribosomal protein L36[102 aa] | TA | 25.0 /38.7 |
8 /9 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
2wax[5] | B | EDC3_HUMAN ENHANCER OF MRNA-DECAPPING PROTEIN 3[30 aa] | A | 0.0 /39.6 |
1 /20 |
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6 | |
2yjt[1] | A | D8AM26_ECOLX REGULATOR OF RIBONUCLEASE ACTIVITY A[158 aa] | D | 50.0 /38.1 |
14 /17 |
SRMB_ECOLI ATP-DEPENDENT RNA HELICASE SRMB | |
8i9x[4] | E | ERB1_CHATD Ribosome biogenesis protein ERB1[658 aa] | G | 0.0 /33.9 |
3 /33 |
G0RYU9_CHATD RNA helicase | |
8ia0[1] | E | ERB1_CHATD Ribosome biogenesis protein ERB1[658 aa] | Y | 0.0 /37.7 |
1 /2 |
G0RYG4_CHATD ATP-dependent RNA helicase | |
8i9z[2] | PA | G0S9T3_CHATD Ribosomal protein L19[148 aa] | Y | 12.5 /36.9 |
8 /9 |
G0RYG4_CHATD ATP-dependent RNA helicase | |
8i9z[2] | U | G0SGD8_CHATD AdoMet-dependent rRNA methyltransferase SPB1[625 a.. | Y | 0.0 /36.9 |
1 /11 |
G0RYG4_CHATD ATP-dependent RNA helicase | |
8i9z[2] | XA | G0SEI0_CHATD 60S ribosomal protein l30-like protein[98 aa] | Y | 18.2 /36.9 |
11 /11 |
G0RYG4_CHATD ATP-dependent RNA helicase | |
8ia0[1] | CA | G0S7E9_CHATD Nucleolar protein 12[117 aa] | Y | 28.6 /37.7 |
14 /14 |
G0RYG4_CHATD ATP-dependent RNA helicase | |
8v83[2] | IA | RL36A_YEAST 60S ribosomal protein L36-A[84 aa] | I | 0.0 /37.4 |
3 /4 |
HAS1_YEAST ATP-dependent RNA helicase HAS1 | |
8v84[2] | AA | RL23A_YEAST 60S ribosomal protein L23-A[122 aa] | C | 25.0 /46.1 |
4 /8 |
DBP10_YEAST ATP-dependent RNA helicase DBP10 | |
7am2[1] | KB | Q4Q9G4_LEIMA GTPase Der[463 aa] | LB | 0.0 /36.6 |
2 /16 |
Q4QHU1_LEIMA DEAD/DEAH box helicase-like protein | |
7am2[1] | R | Q4QCK6_LEIMA bL35m[141 aa] | LB | 100.0 /36.6 |
1 /3 |
Q4QHU1_LEIMA DEAD/DEAH box helicase-like protein | |
2vso[4] | C | IF4F1_YEAST EUKARYOTIC INITIATION FACTOR 4F SUBUNIT P150[239 a.. | A | 35.0 /36.5 |
20 /30 |
IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A | |
2vsx[2] | D | IF4F1_YEAST EUKARYOTIC INITIATION FACTOR 4F SUBUNIT P150[237 a.. | A | 0.0 /36.5 |
3 /3 |
IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A | |
7ymf[1] | B | DDX3X_HUMAN ATP-dependent RNA helicase DDX3X[154 aa] | A | 0.0 /36.1 |
3 /9 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
3peu[2] | B | GLE1_YEAST Nucleoporin GLE1[295 aa] | A | 36.4 /46.0 |
11 /24 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
3peu[2] | B | GLE1_YEAST Nucleoporin GLE1[295 aa] | A | 40.0 /46.0 |
10 /14 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
3rrm[2] | B | GLE1_YEAST Nucleoporin GLE1[295 aa] | A | 33.3 /34.5 |
21 /27 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
4crw[1] | A | CNOT1_HUMAN CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1[226 aa] | B | 30.0 /39.6 |
10 /14 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
4ct4[2] | A | CNOT1_HUMAN CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1[236 aa] | B | 29.2 /36.0 |
24 /25 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
5anr[2] | A | CNOT1_HUMAN CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1[245 aa] | B | 50.0 /35.7 |
14 /17 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
5anr[2] | C | 4ET_HUMAN EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TRANSP.. | B | 23.8 /35.7 |
21 /24 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
6yxx[2] | K | D0A1K1_TRYB9 bL35m[133 aa] | Q | 66.7 /34.4 |
3 /7 |
D0A9G9_TRYB9 DEAD-box helicase, putative | |
7aoi[1] | E | A0A3L6L070_9TRYP bL33m[142 aa] | NB | 50.0 /35.6 |
2 /5 |
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2 | |
6yxx[2] | N | Q57TZ4_TRYB2 mt-EngA[532 aa] | Q | 0.0 /34.4 |
3 /21 |
D0A9G9_TRYB9 DEAD-box helicase, putative | |
7aoi[1] | WB | C9ZS56_TRYB9 GTP-binding protein, putative,mt-EngA[521 aa] | NB | 0.0 /35.6 |
2 /21 |
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2 | |
6yxx[2] | XA | Q586A6_TRYB2 mL84[196 aa] | Q | 0.0 /34.4 |
4 /6 |
D0A9G9_TRYB9 DEAD-box helicase, putative | |
7aoi[1] | OA | A0A3L6L538_9TRYP mL84[195 aa] | NB | 20.0 /35.6 |
5 /8 |
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2 | |
7aoi[1] | LB | UNK11[47 aa] | NB | 0.0 /35.6 |
1 /1 |
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2 | |
7aoi[1] | TB | mt-LAF8[402 aa] | NB | 0.0 /35.6 |
4 /9 |
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2 | |
4brw[1] | B | PAT1_YEAST DNA TOPOISOMERASE 2-ASSOCIATED PROTEIN PAT1[30 aa].. | A | 12.5 /35.5 |
24 /24 |
DHH1_YEAST ATP-DEPENDENT RNA HELICASE DHH1 | |
8i9t[4] | J | NOG1_CHATD Nucleolar GTP-binding protein 1[476 aa] | Y | 16.7 /35.4 |
6 /29 |
G0S5S8_CHATD ATP-dependent RNA helicase DBP10 | |
8i9t[4] | PA | G0SI44_CHATD 60S ribosomal protein l23-like protein[135 aa] | Y | 0.0 /35.4 |
6 /7 |
G0S5S8_CHATD ATP-dependent RNA helicase DBP10 | |
8i9v[1] | R | G0SHQ0_CHATD RNA methyltransferase nop2-like protein[324 aa] | AA | 0.0 /35.4 |
1 /13 |
G0S5S8_CHATD ATP-dependent RNA helicase DBP10 | |
8i9v[1] | V | G0S5L0_CHATD Nucleolar complex-associated protein 3[458 aa] | AA | 0.0 /35.4 |
3 /3 |
G0S5S8_CHATD ATP-dependent RNA helicase DBP10 | |
4bru[1] | B | EDC3_YEAST ENHANCER OF MRNA-DECAPPING PROTEIN 3[29 aa] | A | 23.5 /35.4 |
17 /20 |
DHH1_YEAST ATP-DEPENDENT RNA HELICASE DHH1 | |
6qdv[1] | G | PRP8_HUMAN Pre-mRNA-processing-splicing factor 8[2250 aa] | D | 0.0 /34.4 |
1 /1 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6qw6[5] | R | PRP8_HUMAN Pre-mRNA-processing-splicing factor 8[2212 aa] | X | 0.0 /35.3 |
1 /59 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
8c6j[1] | H | PRP8_HUMAN Pre-mRNA-processing-splicing factor 8[2261 aa] | E | 0.0 /34.4 |
1 /1 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6qx9[3] | QA | RUXG_HUMAN Small nuclear ribonucleoprotein G[73 aa] | AA | 0.0 /35.3 |
2 /2 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
8r08[1] | AA | RUXE_HUMAN Small nuclear ribonucleoprotein E[77 aa] | GA | 0.0 /34.5 |
2 /2 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
8y6o[1] | OA | RUXE_HUMAN Small nuclear ribonucleoprotein E[81 aa] | I | 12.5 /35.2 |
8 /10 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
8y6o[1] | IA | SNR48_HUMAN U11/U12 small nuclear ribonucleoprotein 48 kDa pro.. | I | 20.0 /35.2 |
5 /5 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
7oi6[1] | QA | MRM3_HUMAN rRNA methyltransferase 3, mitochondrial[253 aa] | OA | 33.3 /35.1 |
3 /3 |
DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28 | |
7oi6[1] | UA | RM38_HUMAN 39S ribosomal protein L38, mitochondrial[325 aa] | OA | 60.0 /35.1 |
5 /5 |
DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28 | |
7evn[1] | B | SF3B1_HUMAN Splicing factor 3B subunit 1[815 aa] | E | 0.0 /35.0 |
6 /33 |
DDX42_HUMAN ATP-dependent RNA helicase DDX42 | |
8fkt[6] | N | RL23_HUMAN 60S ribosomal protein L23[134 aa] | AA | 0.0 /34.9 |
7 /9 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8fkt[6] | UA | GTPB4_HUMAN GTP-binding protein 4[449 aa] | AA | 33.3 /34.9 |
6 /35 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8fkv[2] | CB | NOP2_HUMAN Probable 28S rRNA (cytosine(4447)-C(5))-methyltran.. | CA | 0.0 /34.9 |
1 /13 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8fkv[2] | ZA | NOC3L_HUMAN Nucleolar complex protein 3 homolog[561 aa] | CA | 37.5 /34.9 |
8 /19 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
6s8r[1] | B | GGYF1_DROME GIGYF family protein CG11148[27 aa] | A | 11.1 /34.9 |
9 /21 |
DDX6_DROME ATP-dependent RNA helicase me31b | |
6b4i[4] | C | GLE1_HUMAN Nucleoporin GLE1[314 aa] | E | 27.3 /34.7 |
22 /24 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
3rrm[1] | C | NU159_YEAST Nucleoporin NUP159[370 aa] | A | 47.6 /34.5 |
21 /21 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
7znk[2] | BA | THOC4_HUMAN THO complex subunit 4[16 aa] | FA | 0.0 /34.4 |
2 /2 |
DX39B_HUMAN Spliceosome RNA helicase DDX39B | |
2hyi[19] | C | MGN_HUMAN Protein mago nashi homolog[144 aa] | E | 9.7 /34.4 |
31 /33 |
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48 | |
6qdv[7] | F | MGN2_HUMAN Protein mago nashi homolog 2[144 aa] | D | 9.7 /34.4 |
31 /33 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
2hyi[10] | D | RBM8A_HUMAN RNA-binding protein 8A[91 aa] | E | 0.0 /34.4 |
1 /1 |
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48 | |
2j0q[3] | D | RBM8A_HUMAN RNA-BINDING PROTEIN 8A[89 aa] | A | 0.0 /34.4 |
3 /3 |
DDX48_HUMAN ATP-DEPENDENT RNA HELICASE DDX48 | |
6qdv[1] | E | RBM8A_HUMAN RNA-binding protein 8A[91 aa] | D | 0.0 /34.4 |
1 /1 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
7znj[6] | C | RBM8A_HUMAN RNA-binding protein 8A[91 aa] | A | 0.0 /33.7 |
2 /2 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally .. | |
7znj[6] | H | RBM8A_HUMAN RNA-binding protein 8A[91 aa] | A | 12.5 /33.7 |
8 /8 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally .. | |
2hyi[9] | F | CASC3_HUMAN Protein CASC3[56 aa] | E | 20.5 /34.4 |
39 /41 |
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48 | |
2xb2[1] | F | REN3B_HUMAN REGULATOR OF NONSENSE TRANSCRIPTS 3B[15 aa] | A | 57.1 /34.4 |
7 /11 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
2xb2[1] | J | REN3B_HUMAN REGULATOR OF NONSENSE TRANSCRIPTS 3B[17 aa] | K | 50.0 /34.4 |
6 /9 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
4c9b[1] | B | CWC22_HUMAN PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOG[277 aa] | A | 44.1 /34.0 |
34 /39 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
6yvh[4] | A | CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[274 aa] | F | 42.9 /40.6 |
7 /23 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6yvh[1] | E | CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[272 aa] | F | 50.0 /40.6 |
12 /12 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
7a5p[1] | S | CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[253 aa] | UA | 50.0 /34.4 |
2 /2 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
5xjc[7] | C | U5S1_HUMAN 116 kDa U5 small nuclear ribonucleoprotein compone.. | UA | 0.0 /34.4 |
6 /9 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
5xjc[4] | V | CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[452 aa] | UA | 30.0 /34.4 |
10 /11 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6icz[5] | V | CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[452 aa] | C | 100.0 /34.4 |
1 /1 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6qdv[1] | N | CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[459 aa] | D | 30.0 /34.4 |
10 /11 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
5xjc[7] | XA | CASC3_HUMAN Protein CASC3[25 aa] | UA | 22.2 /34.4 |
18 /18 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6yxx[2] | CA | A0A1G4IEQ9_TRYEQ mt-LAF8[443 aa] | Q | 0.0 /34.4 |
4 /10 |
D0A9G9_TRYB9 DEAD-box helicase, putative | |
6yxx[2] | CC | mL52[184 aa] | Q | 0.0 /34.4 |
2 /2 |
D0A9G9_TRYB9 DEAD-box helicase, putative | |
6yxx[1] | R | Q38FJ3_TRYB2 Pseudouridylate synthase, putative[373 aa] | Q | 0.0 /34.4 |
1 /13 |
D0A9G9_TRYB9 DEAD-box helicase, putative | |
5jiu[2] | C | DDX4_MOUSE Probable ATP-dependent RNA helicase DDX4[6 aa] | A | 0.0 /34.2 |
8 /11 |
RANB9_HUMAN Ran-binding protein 9 | |
6zmw[1] | EB | IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1.. | DB | 33.3 /33.9 |
15 /22 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
6zmw[1] | F | EIF3E_HUMAN Eukaryotic translation initiation factor 3 subunit.. | DB | 0.0 /33.9 |
1 /1 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
6zmw[1] | U | EIF3L_HUMAN Eukaryotic translation initiation factor 3 subunit.. | DB | 40.0 /33.9 |
5 /5 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
7ppz[2] | A | Q63UP7_BURPS Burkholderia Lethal Factor 1 (BLF1)[209 aa] | B | 47.1 /33.3 |
34 /34 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
8huj[1] | B | IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1.. | A | 43.8 /33.9 |
16 /22 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
8oz0[1] | EB | IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1.. | DB | 0.0 /33.9 |
3 /3 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
8oz0[1] | Q | RS7_HUMAN 40S ribosomal protein S7[178 aa] | DB | 0.0 /33.9 |
1 /2 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
8i9p[9] | CA | G0SBN1_CHATD 60S ribosomal protein L36[88 aa] | F | 0.0 /33.9 |
2 /2 |
G0RYU9_CHATD RNA helicase | |
8i9p[9] | D | G0S7X0_CHATD Ribosome biogenesis protein C8F11.04[269 aa] | F | 0.0 /33.9 |
4 /12 |
G0RYU9_CHATD RNA helicase | |
8i9p[2] | E | ERB1_CHATD Ribosome biogenesis protein ERB1[258 aa] | F | 0.0 /33.9 |
3 /32 |
G0RYU9_CHATD RNA helicase | |
8i9p[9] | J | G0S832_CHATD Nucleolar protein 16[167 aa] | F | 33.3 /33.9 |
9 /14 |
G0RYU9_CHATD RNA helicase | |
8i9p[1] | P | G0S992_CHATD 60S ribosomal protein L13[117 aa] | F | 0.0 /33.9 |
1 /1 |
G0RYU9_CHATD RNA helicase | |
8i9t[3] | F | ERB1_CHATD Ribosome biogenesis protein ERB1[289 aa] | G | 0.0 /33.9 |
3 /28 |
G0RYU9_CHATD RNA helicase | |
7nsc[1] | B | ARMC8_HUMAN Isoform 2 of Armadillo repeat-containing protein 8.. | A | 62.5 /33.9 |
8 /12 |
RANB9_HUMAN Ran-binding protein 9 | |
7nsc[1] | D | GID4_HUMAN Glucose-induced degradation protein 4 homolog[181 .. | A | 50.0 /33.9 |
10 /10 |
RANB9_HUMAN Ran-binding protein 9 | |
2zu6[5] | B | PDCD4_HUMAN Programmed cell death protein 4[284 aa] | A | 42.1 /33.5 |
38 /38 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
3eiq[2] | B | PDCD4_MOUSE Programmed cell death protein 4[278 aa] | A | 40.6 /32.7 |
32 /32 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
8xxn[1] | LA | PDCD4_HUMAN Programmed cell death protein 4[347 aa] | KA | 36.4 /33.5 |
11 /11 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
9bln[1] | SA | EIF3G_HUMAN Eukaryotic translation initiation factor 3 subunit.. | PA | 0.0 /33.9 |
5 /5 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
7znj[6] | D | MALE_ECO57 THOC4_HUMAN Maltose/maltodextrin-binding periplasmic protein,T.. | A | 20.0 /33.7 |
10 /10 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally .. | |
7znj[6] | X | MALE_ECO57 THOC4_HUMAN Maltose/maltodextrin-binding periplasmic protein,T.. | A | 0.0 /33.7 |
4 /4 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally .. | |
8enk[2] | C | THO1_YEAST Protein THO1[53 aa] | A | 45.5 /33.8 |
11 /11 |
DX39B_HUMAN Spliceosome RNA helicase DDX39B | |
2j0u[1] | C | CASC3_HUMAN PROTEIN CASC3[9 aa] | A | 27.3 /33.5 |
11 /11 |
DDX48_HUMAN ATP-DEPENDENT RNA HELICASE DDX48 | |
7ddx[1] | A | E9Q238_MOUSE KN motif and ankyrin repeat domains 1[246 aa] | B | 22.2 /32.8 |
9 /10 |
IF4A1_MOUSE Eukaryotic initiation factor 4A-I | |
7nac[2] | DA | ERB1_YEAST Ribosome biogenesis protein ERB1[666 aa] | FB | 100.0 /32.1 |
2 /2 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
7nac[2] | EB | A0A6A5Q2X9_YEASX RRP17 isoform 1[141 aa] | FB | 9.1 /32.1 |
11 /13 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
7nac[4] | PA | RL19A_YEAST 60S ribosomal protein L19-A[134 aa] | FB | 0.0 /32.1 |
4 /9 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
7nac[3] | RA | RL27A_YEAST 60S ribosomal protein L27-A[135 aa] | FB | 100.0 /32.1 |
1 /1 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
7nac[4] | TA | RL30_YEAST 60S ribosomal protein L30[97 aa] | FB | 0.0 /32.1 |
5 /5 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
7nad[2] | S | Ribosome biogenesis protein ERB1[412 aa] | Z | 100.0 /32.1 |
2 /2 |
A0A8H8UL81_YEASX SPB4 isoform 1 | |
7r72[1] | W | SPB1_YEAST 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransfer.. | X | 0.0 /32.1 |
1 /3 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
7r7a[1] | CB | SPB1_YEAST 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransfer.. | EB | 0.0 /32.1 |
1 /2 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
5suq[1] | E | Tho2, Hpr1, Mft1, and Thp2[2231 aa] | A | 15.4 /32.0 |
13 /13 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
5suq[1] | E | Tho2, Hpr1, Mft1, and Thp2[2231 aa] | C | 0.0 /32.0 |
1 /1 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
5suq[1] | F | Tho2, Hpr1, Mft1, and Thp2[2230 aa] | A | 0.0 /32.0 |
1 /1 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
5suq[1] | F | Tho2, Hpr1, Mft1, and Thp2[2230 aa] | C | 25.0 /32.0 |
16 /16 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
7apx[3] | A | THO2_YEAST THO complex subunit 2,Tho2[1165 aa] | F | 10.0 /34.6 |
10 /17 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
7v2y[1] | B | THO2_YEAST THO complex subunit 2[1226 aa] | F | 20.0 /32.0 |
40 /42 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
7luv[1] | C | THO2_YEAST THO complex subunit 2[911 aa] | F | 27.8 /32.0 |
18 /20 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
5sup[2] | E | YRA1_YEAST RNA annealing protein YRA1[17 aa] | A | 23.1 /31.8 |
13 /13 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
5sup[1] | F | YRA1_YEAST RNA annealing protein YRA1[15 aa] | C | 23.1 /31.8 |
13 /13 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
7apk[4] | X | THOC2_HUMAN THO complex subunit 2[707 aa] | CA | 23.1 /31.5 |
13 /20 |
DX39B_HUMAN Spliceosome RNA helicase DDX39B | |
7znk[8] | Z | THOC2_HUMAN THO complex subunit 2[914 aa] | FA | 29.4 /34.4 |
17 /19 |
DX39B_HUMAN Spliceosome RNA helicase DDX39B | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
NUCLEOTIDE | |||||||
740 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6elz[1] | A | 25S ribosomal RNA | HA | 0.0 /44.3 |
1 /5 |
HAS1_YEAST ATP-dependent RNA helicase HAS1 | |
4db2[3] | E | 5'-R(*GP*GP*GP*CP*GP*GP*GP*CP*CP*CP*GP*CP*CP*C)-3'.. | A | 0.0 /38.7 |
1 /4 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
4db2[4] | F | 5'-R(*GP*GP*GP*CP*GP*GP*GP*CP*CP*CP*GP*CP*CP*C)-3'.. | A | 85.7 /38.7 |
7 /13 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
8eti[1] | A | RNA (1564-MER) | J | 20.0 /41.9 |
5 /6 |
HAS1_SCHPO ATP-dependent RNA helicase has1 | |
8eup[1] | A | RNA (1422-MER) | J | 28.6 /41.8 |
7 /10 |
S6CCW7_SCHPM RNA helicase | |
8esr[1] | A | RNA (2142-MER) | I | 16.7 /39.5 |
6 /10 |
HAS1_SCHPO ATP-dependent RNA helicase has1 | |
8ev3[1] | A | RNA (1452-MER) | J | 18.2 /39.5 |
11 /16 |
S6CCW7_SCHPM RNA helicase | |
8euy[1] | A | RNA (1095-MER) | J | 16.7 /39.4 |
6 /11 |
HAS1_SCHPO ATP-dependent RNA helicase has1 | |
8esq[1] | B | RNA (2231-MER) | J | 14.3 /38.9 |
7 /12 |
HAS1_SCHPO ATP-dependent RNA helicase has1 | |
8eth[1] | A | RNA (1263-MER) | J | 12.5 /38.9 |
8 /12 |
HAS1_SCHPO ATP-dependent RNA helicase has1 | |
8fkp[1] | C | 28S rRNA | TA | 0.0 /38.7 |
1 /4 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fkq[1] | C | 28S rRNA | PA | 0.0 /38.7 |
1 /5 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fkr[1] | D | 28S rRNA | XA | 0.0 /38.7 |
1 /4 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fks[1] | D | 28S rRNA | TA | 0.0 /38.7 |
1 /4 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fkt[1] | E | 28S rRNA | AA | 25.0 /34.9 |
4 /22 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8fkt[1] | E | 28S rRNA | YA | 0.0 /38.7 |
1 /4 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fku[1] | E | 28S rRNA | BA | 16.7 /34.9 |
6 /26 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8fku[1] | E | 28S rRNA | VA | 0.0 /38.7 |
2 /5 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fkw[1] | E | 28S rRNA | DA | 28.6 /34.9 |
7 /47 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8fkw[1] | E | 28S rRNA | YA | 0.0 /38.7 |
1 /4 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fkx[1] | E | 28S rRNA | DA | 42.9 /34.9 |
7 /35 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8fkx[1] | E | 28S rRNA | YA | 0.0 /38.7 |
1 /4 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
2db3[3] | A | 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3' | E | 76.2 /33.8 |
21 /21 |
VASA_DROME ATP-dependent RNA helicase vasa | |
6uv1[2] | C | RNA rU10 | A | 73.9 /38.0 |
23 /23 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
6uv2[1] | B | RNA 125a_oligo1 | A | 72.0 /38.0 |
25 /25 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
6uv3[1] | B | 125a-oligo2 | A | 72.0 /38.0 |
25 /25 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
6uv4[1] | B | 18a_oligo1 | A | 68.0 /38.0 |
25 /25 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
8ia0[1] | A | RNA (3341-MER) | G | 25.0 /33.9 |
8 /18 |
G0RYU9_CHATD RNA helicase | |
8ia0[1] | A | RNA (3341-MER) | Y | 53.3 /37.7 |
30 /58 |
G0RYG4_CHATD ATP-dependent RNA helicase | |
8v83[1] | A | Saccharomyces cerevisiae S288C 25S ribosomal RNA | I | 20.0 /37.4 |
5 /8 |
HAS1_YEAST ATP-dependent RNA helicase HAS1 | |
8v84[1] | A | Saccharomyces cerevisiae 25S ribosomal RNA | J | 20.0 /37.4 |
5 /8 |
HAS1_YEAST ATP-dependent RNA helicase HAS1 | |
8i9z[1] | A | RNA (3341-MER) | G | 22.2 /33.9 |
9 /19 |
G0RYU9_CHATD RNA helicase | |
8i9z[1] | A | RNA (3341-MER) | Y | 48.5 /36.9 |
33 /56 |
G0RYG4_CHATD ATP-dependent RNA helicase | |
8v87[1] | A | 25S ribosomal RNA | C | 33.3 /36.9 |
9 /47 |
DBP10_YEAST ATP-dependent RNA helicase DBP10 | |
7am2[1] | VB | Ribosomal RNA | LB | 62.5 /36.6 |
8 /64 |
Q4QHU1_LEIMA DEAD/DEAH box helicase-like protein | |
7am2[1] | XB | R2 | LB | 0.0 /36.6 |
2 /5 |
Q4QHU1_LEIMA DEAD/DEAH box helicase-like protein | |
4d25[2] | B | 5'-R(*UP*GP*AP*CP*AP*UP)-3' | A | 70.8 /36.5 |
24 /24 |
O01378_BOMMO BMVLG PROTEIN | |
7pmm[1] | C | RNA (45mer) containing HP92 of the 23S rRNA | A | 63.0 /36.5 |
27 /27 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
7pmm[1] | C | RNA (45mer) containing HP92 of the 23S rRNA | B | 25.0 /36.5 |
8 /21 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
7pmm[1] | D | RNA (45mer) containing HP92 of the 23S rRNA | A | 25.0 /36.5 |
8 /28 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
7pmm[1] | D | RNA (45mer) containing HP92 of the 23S rRNA | B | 57.1 /36.5 |
28 /28 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
7pmq[4] | E | RNA (42-MER) | A | 60.7 /36.5 |
28 /28 |
W8TF60_ECOLX ATP-dependent RNA helicase DbpA | |
7pmq[4] | H | RNA (42-MER) | A | 30.0 /36.5 |
10 /31 |
W8TF60_ECOLX ATP-dependent RNA helicase DbpA | |
7pli[5] | B | RNA (5'-D(*(POP))-R(P*GP*GP*AP*CP*AP*UP*AP*UP*GP*G.. | A | 20.0 /36.5 |
10 /30 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
7pli[5] | D | RNA (5'-D(*(POP))-R(P*GP*GP*AP*CP*AP*UP*AP*UP*GP*G.. | A | 75.0 /36.5 |
20 /20 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
7pli[1] | F | RNA (5'-D(*(POP))-R(P*GP*GP*AP*CP*AP*UP*AP*UP*GP*G.. | E | 22.2 /36.5 |
9 /29 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
7pli[1] | F | RNA (5'-D(*(POP))-R(P*GP*GP*AP*CP*AP*UP*AP*UP*GP*G.. | K | 72.7 /36.2 |
22 /22 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
3i5x[3] | B | 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3' | A | 77.3 /36.0 |
22 /35 |
MS116_YEAST ATP-dependent RNA helicase MSS116 | |
3i5y[1] | B | 5'-R(*UP*UP*UP*(5BU)P*UP*UP*UP*UP*UP*U)-3' | A | 73.9 /36.0 |
23 /35 |
MS116_YEAST ATP-dependent RNA helicase MSS116 | |
3sqw[2] | B | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | A | 80.0 /36.0 |
20 /26 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
4tyn[1] | A | DNA (5'-D(P*AP*AP*AP*AP*AP*AP*A)-3') | B | 73.9 /36.0 |
23 /29 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
4tyw[3] | B | RNA (5'-R(P*AP*AP*AP*AP*AP*AP*A)-3') | A | 81.0 /36.0 |
21 /27 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
4tyy[1] | A | RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') | B | 78.9 /36.0 |
19 /26 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
3fht[2] | C | RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') | A | 41.7 /35.0 |
24 /25 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
7aoi[1] | F | mt-LSU rRNA | NB | 34.6 /35.6 |
26 /152 |
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2 | |
8i9t[1] | A | RNA (3341-MER) | G | 22.2 /33.9 |
9 /19 |
G0RYU9_CHATD RNA helicase | |
8i9t[1] | A | RNA (3341-MER) | Y | 63.6 /35.4 |
11 /29 |
G0S5S8_CHATD ATP-dependent RNA helicase DBP10 | |
8i9w[1] | A | RNA (3341-MER) | F | 20.0 /33.9 |
10 /21 |
G0RYU9_CHATD RNA helicase | |
8i9w[1] | A | RNA (3341-MER) | Z | 38.5 /35.4 |
13 /53 |
G0S5S8_CHATD ATP-dependent RNA helicase DBP10 | |
6qx9[1] | A | U1 snRNA | AA | 64.7 /35.3 |
17 /17 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
6qx9[1] | H | AdML pre-mRNA | AA | 0.0 /35.3 |
2 /2 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
8y6o[1] | A | pre-mRNA | I | 0.0 /35.2 |
2 /2 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
8y6o[1] | EA | U11 snRNA | I | 50.0 /35.2 |
2 /2 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
7oi6[1] | NA | 16S rRNA | OA | 33.3 /35.1 |
21 /28 |
DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28 | |
3g0h[1] | B | 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3' | A | 44.0 /35.0 |
25 /26 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
6o5f[2] | C | RNA (5'-R(P*CP*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*GP*CP.. | A | 61.5 /34.4 |
13 /15 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
6o5f[2] | C | RNA (5'-R(P*CP*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*GP*CP.. | B | 0.0 /34.4 |
4 /5 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
8ssw[1] | D | RNA (28-MER) | A | 0.0 /34.6 |
2 /5 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
8ssw[1] | D | RNA (28-MER) | B | 77.8 /35.0 |
9 /15 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
8fkv[1] | E | 28S rRNA | BB | 0.0 /38.7 |
1 /4 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fkv[1] | E | 28S rRNA | CA | 33.3 /34.9 |
9 /47 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8fky[1] | F | 28S rRNA | EB | 0.0 /38.6 |
1 /4 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
8fky[1] | F | 28S rRNA | IA | 42.9 /34.9 |
7 /36 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
2xb2[1] | G | RNA POLY-U-RIBONUCLEOTIDE | K | 78.3 /34.4 |
23 /23 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
6l5n[2] | C | poly(U)-15mer | A | 69.6 /34.5 |
23 /23 |
DDX21_HUMAN Nucleolar RNA helicase 2 | |
8r08[1] | A | U1 snRNA | GA | 0.0 /34.5 |
4 /4 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
8r08[1] | U | oligo 1 | GA | 72.2 /34.5 |
18 /18 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
6o5f[1] | D | RNA (5'-R(P*CP*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*GP*CP.. | A | 0.0 /34.4 |
4 /5 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
6o5f[1] | D | RNA (5'-R(P*CP*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*GP*CP.. | B | 61.5 /34.4 |
13 /16 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
7znk[2] | B | RNA | FA | 63.6 /34.4 |
11 /11 |
DX39B_HUMAN Spliceosome RNA helicase DDX39B | |
2xb2[1] | D | RNA POLY-U-RIBONUCLEOTIDE | A | 66.7 /34.4 |
27 /27 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
5xjc[1] | G | pre-mRNA | UA | 66.7 /34.4 |
27 /27 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
5yzg[1] | G | Pre-mRNA | FA | 66.7 /34.4 |
27 /27 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
8c6j[1] | S | PM5 5' Exon | E | 58.6 /34.4 |
29 /29 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
8i0w[1] | G | pre-mRNA | FA | 66.7 /34.4 |
27 /27 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6yxx[1] | L | 12S ribosomal RNA | Q | 36.0 /34.4 |
25 /148 |
D0A9G9_TRYB9 DEAD-box helicase, putative | |
6yxy[1] | F | 12S ribosomal RNA | J | 37.5 /34.4 |
24 /181 |
D0A9G9_TRYB9 mt-LAF2 | |
5zc9[1] | B | RNA (5'-R(*AP*GP*AP*GP*AP*GP*AP*GP*AP*G)-3') | A | 61.5 /33.9 |
26 /26 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
6xki[1] | B | RNA (5'-R(*AP*GP*AP*GP*AP*GP*AP*GP*AP*G)-3') | A | 61.5 /33.9 |
26 /26 |
IF4A1_MOUSE Eukaryotic initiation factor 4A-I | |
8i9p[1] | A | RNA (3341-MER) | F | 22.2 /33.9 |
9 /20 |
G0RYU9_CHATD RNA helicase | |
8i9r[1] | A | RNA (3341-MER) | F | 36.4 /33.9 |
11 /22 |
G0RYU9_CHATD RNA helicase | |
8i9v[1] | A | RNA (3341-MER) | AA | 33.3 /35.4 |
12 /48 |
G0S5S8_CHATD ATP-dependent RNA helicase DBP10 | |
8i9v[1] | A | RNA (3341-MER) | G | 30.0 /33.9 |
10 /21 |
G0RYU9_CHATD RNA helicase | |
8i9x[1] | A | RNA (3341-MER) | AA | 50.0 /35.4 |
14 /57 |
G0S5S8_CHATD ATP-dependent RNA helicase DBP10 | |
8i9x[1] | A | RNA (3341-MER) | G | 30.0 /33.9 |
10 /20 |
G0RYU9_CHATD RNA helicase | |
8i9y[1] | A | RNA (3341-MER) | G | 12.5 /33.9 |
8 /17 |
G0RYU9_CHATD RNA helicase | |
2j0q[3] | E | 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U).. | A | 73.9 /34.4 |
23 /23 |
DDX48_HUMAN ATP-DEPENDENT RNA HELICASE DDX48 | |
5sup[4] | G | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | A | 59.1 /31.8 |
22 /22 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
2db3[1] | D | 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3' | H | 76.2 /33.8 |
21 /21 |
VASA_DROME ATP-dependent RNA helicase vasa | |
2hyi[4] | A | 5'-R(*UP*UP*UP*UP*UP*U)-3' | E | 68.0 /34.4 |
25 /25 |
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48 | |
3pew[2] | B | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | A | 69.6 /35.0 |
23 /23 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
5elx[1] | B | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | A | 69.6 /34.7 |
23 /23 |
DBP5_YEAS7 ATP-dependent RNA helicase DBP5 | |
7znj[6] | E | RNA | A | 69.6 /33.7 |
23 /23 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally .. | |
8enk[1] | E | RNA | B | 50.0 /33.6 |
22 /22 |
DX39B_HUMAN Spliceosome RNA helicase DDX39B | |
6y5q[1] | V | U2snRNA | F | 0.0 /32.7 |
2 /2 |
DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 | |
7evo[1] | A | U2 snRNA | L | 0.0 /32.7 |
2 /2 |
A0A0C4DG89_HUMAN RNA helicase | |
7oqb[2] | U | U2 snRNA | T | 12.5 /32.2 |
8 /9 |
PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP.. | |
6y53[1] | S | U2 snRNA | D | 0.0 /32.1 |
2 /2 |
DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 | |
7nac[1] | A | 25S rRNA | FB | 50.0 /32.1 |
32 /66 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
7nad[1] | A | 25S rRNA | Z | 46.9 /32.1 |
32 /68 |
A0A8H8UL81_YEASX SPB4 isoform 1 | |
7r72[1] | A | 25S rRNA | X | 51.6 /32.1 |
31 /65 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
7r7a[1] | A | 25S rRNA | EB | 51.5 /32.1 |
33 /67 |
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
740 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1xtj[35] | C |
ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms] |
A | 50.0 /33.5 |
14 /14 |
UAP56_HUMAN Probable ATP-dependent RNA helicase p47 | |
3dkp[7] | D |
ADP
ADENOSINE-5'-DIPHOSPHATE[9 atoms] |
A | 66.7 /36.0 |
3 /4 |
DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 | |
3ews[10] | C |
ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms] |
A | 66.7 /34.8 |
3 /18 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
3i61[2] | C |
ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms] |
A | 56.2 /36.0 |
16 /16 |
MS116_YEAST ATP-dependent RNA helicase MSS116 | |
5dtu[1] | B |
ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms] |
A | 66.7 /32.6 |
12 /12 |
G0SBQ7_CHATD Prp28 | |
6b4i[2] | I |
ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms] |
E | 66.7 /34.7 |
3 /17 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
8fkt[6] | LD |
ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms] |
AA | 77.8 /34.9 |
9 /9 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8i9z[2] | KB |
ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms] |
Y | 78.6 /36.9 |
14 /14 |
G0RYG4_CHATD ATP-dependent RNA helicase | |
5gvr[1] | B |
LMR
(2S)-2-hydroxybutanedioic acid[9 atoms] |
A | 100.0 /38.9 |
1 /8 |
DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 | |
2wax[2] | F |
CXS
3-CYCLOHEXYL-1-PROPYLSULFONIC ACID[14 atoms] |
A | 33.3 /39.6 |
3 /5 |
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6 | |
2wax[4] | G |
CXS
3-CYCLOHEXYL-1-PROPYLSULFONIC ACID[14 atoms] |
A | 33.3 /39.6 |
3 /7 |
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6 | |
3mwl[1] | F |
8OX
6-azanyl-9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxy.. |
B | 57.1 /36.7 |
14 /14 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
3mwk[3] | F |
8OP
[(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,.. |
B | 53.8 /36.7 |
13 /13 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
3nbf[1] | I |
8OP
[(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,.. |
C | 0.0 /36.7 |
5 /5 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
3nbf[2] | E |
8OD
[(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,.. |
A | 57.1 /36.7 |
14 /14 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
3nbf[4] | F |
8OD
[(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,.. |
A | 70.0 /36.7 |
10 /10 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
4tyy[1] | D |
CDP
CYTIDINE-5'-DIPHOSPHATE[25 atoms] |
B | 60.0 /36.0 |
15 /15 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
4tz0[1] | C |
GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] |
A | 50.0 /36.0 |
16 /16 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
4tz6[1] | D |
UDP
URIDINE-5'-DIPHOSPHATE[25 atoms] |
A | 57.1 /36.0 |
14 /14 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
3rrn[1] | D |
IHP
INOSITOL HEXAKISPHOSPHATE[36 atoms] |
A | 0.0 /35.7 |
2 /4 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
2gxq[12] | B |
AMP
ADENOSINE MONOPHOSPHATE[23 atoms] |
A | 69.2 /37.1 |
13 /13 |
O07897_THETH heat resistant RNA dependent ATPase | |
2i4i[1] | B |
AMP
ADENOSINE MONOPHOSPHATE[23 atoms] |
A | 0.0 /35.1 |
1 /14 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
2vso[7] | E |
AMP
ADENOSINE MONOPHOSPHATE[23 atoms] |
A | 75.0 /36.5 |
8 /11 |
IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A | |
3ber[1] | C |
AMP
ADENOSINE MONOPHOSPHATE[23 atoms] |
A | 85.7 /39.2 |
14 /14 |
DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 | |
5elx[1] | C |
M2A
[(2~{R},3~{R},4~{R},5~{S})-2-(6-aminopurin-9-yl)-4.. |
A | 55.6 /34.7 |
18 /18 |
DBP5_YEAS7 ATP-dependent RNA helicase DBP5 | |
7liu[2] | F |
08T
[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxi.. |
A | 85.7 /34.7 |
7 /19 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
6qdv[1] | JB |
ATP
ADENOSINE-5'-TRIPHOSPHATE[31 atoms] |
D | 55.0 /34.4 |
20 /20 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6yxx[2] | ID |
ATP
ADENOSINE-5'-TRIPHOSPHATE[31 atoms] |
Q | 58.8 /34.4 |
17 /23 |
D0A9G9_TRYB9 DEAD-box helicase, putative | |
8c6j[2] | TB |
ATP
ADENOSINE-5'-TRIPHOSPHATE[31 atoms] |
E | 50.0 /34.4 |
18 /18 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6cz5[1] | B |
FPJ
5'-O-[(R)-hydroxy(propanoylamino)phosphoryl]adenos.. |
A | 50.0 /34.2 |
8 /8 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
5zc9[1] | E |
RCG
(1R,2R,3S,3aR,8bS)-6,8-dimethoxy-3a-(4-methoxyphen.. |
A | 40.0 /33.9 |
5 /5 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
6xki[1] | E |
V6D
(3S,6Z,8E,11S,15R)-15-amino-3-[(1E,3E,5E)-7-(dimet.. |
A | 44.4 /33.9 |
9 /9 |
IF4A1_MOUSE Eukaryotic initiation factor 4A-I | |
5zbz[1] | B |
SAU
13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-.. |
A | 50.0 /33.9 |
6 /6 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
2db3[4] | J |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
E | 85.7 /33.8 |
7 /23 |
VASA_DROME ATP-dependent RNA helicase vasa | |
2hyi[7] | L |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
E | 55.0 /34.4 |
20 /20 |
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48 | |
3b7g[6] | C |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
A | 50.0 /35.9 |
10 /13 |
DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 | |
3g0h[1] | C |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
A | 81.8 /35.0 |
11 /17 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
3i5x[2] | C |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
A | 63.2 /36.0 |
19 /19 |
MS116_YEAST ATP-dependent RNA helicase MSS116 | |
4d25[6] | C |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
A | 81.2 /36.5 |
16 /22 |
O01378_BOMMO BMVLG PROTEIN | |
4w7s[1] | I |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
B | 58.3 /31.9 |
12 /12 |
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | |
5zc9[1] | C |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
A | 53.3 /33.9 |
15 /20 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
6l5n[2] | E |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
A | 68.4 /34.5 |
19 /21 |
DDX21_HUMAN Nucleolar RNA helicase 2 | |
6l5n[1] | H |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
B | 25.0 /34.5 |
4 /5 |
DDX21_HUMAN Nucleolar RNA helicase 2 | |
6xki[7] | C |
ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato.. |
A | 50.0 /33.9 |
16 /23 |
IF4A1_MOUSE Eukaryotic initiation factor 4A-I | |
5suq[2] | G |
KEG
12-TUNGSTOPHOSPHATE[53 atoms] |
A | 50.0 /32.0 |
8 /8 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
5suq[1] | H |
KEG
12-TUNGSTOPHOSPHATE[53 atoms] |
A | 33.3 /32.0 |
3 /3 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
5suq[1] | I |
KEG
12-TUNGSTOPHOSPHATE[53 atoms] |
A | 100.0 /32.0 |
4 /4 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
5suq[1] | H |
KEG
12-TUNGSTOPHOSPHATE[53 atoms] |
C | 25.0 /32.0 |
4 /7 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
5suq[1] | I |
KEG
12-TUNGSTOPHOSPHATE[53 atoms] |
C | 50.0 /32.0 |
6 /6 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
METAL | |||||||
740 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1fuk[1] | B |
ZN
ZINC ION[1 atoms] |
A | 33.3 /42.6 |
3 /3 |
IF4A_YEAST EUKARYOTIC INITIATION FACTOR 4A | |
1vec[1] | C |
ZN
ZINC ION[1 atoms] |
A | 50.0 /39.3 |
2 /2 |
DDX6_HUMAN ATP-dependent RNA helicase p54 | |
1vec[1] | C |
ZN
ZINC ION[1 atoms] |
B | 0.0 /39.3 |
1 /1 |
DDX6_HUMAN ATP-dependent RNA helicase p54 | |
2rb4[1] | F |
ZN
ZINC ION[1 atoms] |
A | 50.0 /41.7 |
2 /2 |
DDX25_HUMAN ATP-dependent RNA helicase DDX25 | |
8tbx[1] | D |
ZN
ZINC ION[1 atoms] |
A | 100.0 /100.0 |
4 /4 |
DDX1_HUMAN DDX1_HUMAN ATP-dependent RNA helicase DDX1 | |
2gxs[2] | C |
CA
CALCIUM ION[1 atoms] |
A | 33.3 /37.1 |
3 /3 |
O07897_THETH heat resistant RNA dependent ATPase | |
2gxs[2] | E |
CA
CALCIUM ION[1 atoms] |
A | 100.0 /37.1 |
3 /3 |
O07897_THETH heat resistant RNA dependent ATPase | |
4kbf[1] | D |
NA
SODIUM ION[1 atoms] |
A | 0.0 /37.1 |
3 /3 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
4kbf[1] | E |
NA
SODIUM ION[1 atoms] |
A | 33.3 /37.1 |
3 /3 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
2rb4[2] | C |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /41.7 |
1 /1 |
DDX25_HUMAN ATP-dependent RNA helicase DDX25 | |
2rb4[1] | D |
CL
CHLORIDE ION[1 atoms] |
A | 50.0 /41.7 |
2 /2 |
DDX25_HUMAN ATP-dependent RNA helicase DDX25 | |
3eaq[1] | C |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /42.5 |
3 /3 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
3eaq[1] | D |
CL
CHLORIDE ION[1 atoms] |
B | 0.0 /41.9 |
1 /3 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
3fe2[1] | E |
CL
CHLORIDE ION[1 atoms] |
B | 0.0 /37.1 |
2 /3 |
DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 | |
3iuy[1] | F |
CL
CHLORIDE ION[1 atoms] |
B | 0.0 /38.8 |
1 /1 |
DDX53_HUMAN Probable ATP-dependent RNA helicase DDX53 | |
4ct4[1] | I |
CL
CHLORIDE ION[1 atoms] |
D | 60.0 /35.9 |
5 /5 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
6o5f[2] | E |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /34.4 |
4 /4 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
6o5f[2] | F |
CL
CHLORIDE ION[1 atoms] |
A | 0.0 /34.4 |
3 /3 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
6o5f[2] | G |
CL
CHLORIDE ION[1 atoms] |
A | 33.3 /34.4 |
6 /7 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
4nho[1] | J |
HG
MERCURY (II) ION[1 atoms] |
A | 16.7 /34.4 |
6 /6 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
1xtj[11] | B |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /33.5 |
4 /4 |
UAP56_HUMAN Probable ATP-dependent RNA helicase p47 | |
2db3[18] | I |
MG
MAGNESIUM ION[1 atoms] |
E | 100.0 /33.8 |
2 /2 |
VASA_DROME ATP-dependent RNA helicase vasa | |
2hyi[13] | K |
MG
MAGNESIUM ION[1 atoms] |
E | 100.0 /34.4 |
3 /3 |
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48 | |
2pl3[1] | B |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /38.9 |
1 /1 |
DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 | |
3dkp[7] | B |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /36.0 |
1 /1 |
DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 | |
3fht[2] | E |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /35.0 |
2 /3 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
3i5x[4] | D |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /36.0 |
3 /3 |
MS116_YEAST ATP-dependent RNA helicase MSS116 | |
3ly5[1] | E |
MG
MAGNESIUM ION[1 atoms] |
A | 83.3 /38.5 |
6 /6 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
3pew[2] | G |
MG
MAGNESIUM ION[1 atoms] |
A | 0.0 /35.0 |
1 /1 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
3pey[1] | G |
MG
MAGNESIUM ION[1 atoms] |
A | 0.0 /34.7 |
1 /1 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
4ct4[3] | E |
MG
MAGNESIUM ION[1 atoms] |
B | 100.0 /36.0 |
3 /3 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
4ct4[1] | H |
MG
MAGNESIUM ION[1 atoms] |
D | 25.0 /35.9 |
4 /4 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
4tyn[1] | C |
MG
MAGNESIUM ION[1 atoms] |
B | 100.0 /36.0 |
5 /5 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
4tyw[1] | D |
MG
MAGNESIUM ION[1 atoms] |
A | 42.9 /36.0 |
7 /7 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
5dtu[1] | C |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /32.6 |
4 /4 |
G0SBQ7_CHATD Prp28 | |
5elx[3] | D |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /34.7 |
3 /3 |
DBP5_YEAS7 ATP-dependent RNA helicase DBP5 | |
5elx[1] | H |
MG
MAGNESIUM ION[1 atoms] |
A | 0.0 /34.7 |
1 /1 |
DBP5_YEAS7 ATP-dependent RNA helicase DBP5 | |
5zc9[1] | D |
MG
MAGNESIUM ION[1 atoms] |
A | 66.7 /33.9 |
3 /3 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
6b4j[4] | K |
MG
MAGNESIUM ION[1 atoms] |
E | 100.0 /34.7 |
2 /4 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
6l5l[1] | B |
MG
MAGNESIUM ION[1 atoms] |
A | 0.0 /34.9 |
1 /1 |
DDX21_HUMAN Nucleolar RNA helicase 2 | |
6l5n[1] | J |
MG
MAGNESIUM ION[1 atoms] |
B | 0.0 /34.5 |
1 /1 |
DDX21_HUMAN Nucleolar RNA helicase 2 | |
6qdv[2] | IB |
MG
MAGNESIUM ION[1 atoms] |
D | 100.0 /34.4 |
3 /3 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
6uv0[1] | C |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /37.2 |
1 /1 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
6uv1[13] | H |
MG
MAGNESIUM ION[1 atoms] |
A | 0.0 /38.0 |
2 /2 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
6uv1[1] | J |
MG
MAGNESIUM ION[1 atoms] |
A | 50.0 /38.0 |
2 /3 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
6uv1[1] | P |
MG
MAGNESIUM ION[1 atoms] |
B | 25.0 /38.0 |
4 /4 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
6uv2[2] | F |
MG
MAGNESIUM ION[1 atoms] |
A | 25.0 /38.0 |
4 /4 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
6uv2[1] | H |
MG
MAGNESIUM ION[1 atoms] |
A | 0.0 /38.0 |
3 /3 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
6xki[7] | D |
MG
MAGNESIUM ION[1 atoms] |
A | 50.0 /33.9 |
2 /2 |
IF4A1_MOUSE Eukaryotic initiation factor 4A-I | |
7aoi[1] | LC |
MG
MAGNESIUM ION[1 atoms] |
NB | 100.0 /35.6 |
1 /2 |
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2 | |
8arp[3] | I |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /38.5 |
3 /3 |
DBP2_YEAST ATP-dependent RNA helicase DBP2 | |
8c6j[1] | SB |
MG
MAGNESIUM ION[1 atoms] |
E | 83.3 /34.4 |
6 /6 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
8fkv[4] | OD |
MG
MAGNESIUM ION[1 atoms] |
CA | 100.0 /34.9 |
1 /1 |
DDX54_HUMAN ATP-dependent RNA helicase DDX54 | |
8i9z[2] | LB |
MG
MAGNESIUM ION[1 atoms] |
Y | 100.0 /36.9 |
1 /1 |
G0RYG4_CHATD ATP-dependent RNA helicase | |
4lk2[1] | C |
NI
NICKEL (II) ION[1 atoms] |
A | 0.0 /32.2 |
1 /3 |
PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP.. | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
OTHERPOLY | |||||||
740 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4db4[2] | C | 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C.. | A | 100.0 /38.7 |
6 /11 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
4db4[2] | E | 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C.. | A | 50.0 /38.7 |
4 /4 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
7liu[2] | C | 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C.. | A | 65.4 /34.7 |
26 /26 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
7liu[1] | D | 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C.. | A | 0.0 /34.7 |
1 /1 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
740 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6f9s[2] | A | DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6[167 aa] | A | 17.6 /39.6 |
17 /17 |
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 | |
1vec[1] | B | DDX6_HUMAN ATP-dependent RNA helicase p54[206 aa] | A | 14.3 /39.3 |
7 /8 |
DDX6_HUMAN ATP-dependent RNA helicase p54 | |
1vec[1] | A | DDX6_HUMAN ATP-dependent RNA helicase p54[206 aa] | B | 25.0 /39.3 |
8 /8 |
DDX6_HUMAN ATP-dependent RNA helicase p54 | |
2zu6[1] | D | IF4A1_HUMAN Eukaryotic initiation factor 4A-I[345 aa] | F | 0.0 /39.0 |
1 /1 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
8arp[6] | B | DBP2_YEAST ATP-dependent RNA helicase DBP2[444 aa] | A | 20.0 /38.5 |
5 /12 |
DBP2_YEAST ATP-dependent RNA helicase DBP2 | |
8arp[6] | C | DBP2_YEAST ATP-dependent RNA helicase DBP2[445 aa] | A | 33.3 /38.5 |
3 /4 |
DBP2_YEAST ATP-dependent RNA helicase DBP2 | |
8arp[6] | D | DBP2_YEAST ATP-dependent RNA helicase DBP2[444 aa] | A | 13.3 /38.5 |
15 /20 |
DBP2_YEAST ATP-dependent RNA helicase DBP2 | |
8arp[6] | F | DBP2_YEAST ATP-dependent RNA helicase DBP2[443 aa] | A | 9.1 /38.5 |
11 /11 |
DBP2_YEAST ATP-dependent RNA helicase DBP2 | |
7dtk[2] | B | CGH1_CAEEL ATP-dependent RNA helicase cgh-1[203 aa] | A | 0.0 /37.7 |
9 /9 |
CGH1_CAEEL ATP-dependent RNA helicase cgh-1 | |
1wrb[2] | B | O97032_DUGJA DjVLGB[232 aa] | A | 37.5 /37.2 |
24 /33 |
O97032_DUGJA DjVLGB | |
4kbf[3] | B | Q72GF3_THET2 Heat resistant RNA dependent ATPase[365 aa] | A | 26.7 /37.1 |
15 /16 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
2gxq[17] | A | O07897_THETH heat resistant RNA dependent ATPase[207 aa] | A | 23.1 /37.1 |
13 /14 |
O07897_THETH heat resistant RNA dependent ATPase | |
2vsx[2] | B | IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A[366 aa] | A | 36.4 /36.5 |
22 /22 |
IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A | |
1hv8[2] | B | H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669[363 aa].. | A | 0.0 /36.2 |
10 /10 |
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669 | |
7pli[6] | C | DBPA_ECOLI ATP-dependent RNA helicase DbpA[456 aa] | A | 0.0 /36.5 |
9 /18 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
1fuu[1] | A | IF4A_YEAST YEAST INITIATION FACTOR 4A[215 aa] | B | 60.0 /36.0 |
5 /5 |
IF4A_YEAST YEAST INITIATION FACTOR 4A | |
1t6n[2] | B | UAP56_HUMAN Probable ATP-dependent RNA helicase[207 aa] | A | 33.3 /35.1 |
15 /16 |
UAP56_HUMAN Probable ATP-dependent RNA helicase | |
6o5f[2] | B | DDX3X_HUMAN ATP-dependent RNA helicase DDX3X[417 aa] | A | 0.0 /34.4 |
4 /7 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
7liu[2] | B | DDX3X_HUMAN ATP-dependent RNA helicase DDX3X[442 aa] | A | 25.0 /34.7 |
12 /12 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
5jiu[2] | B | RANB9_HUMAN Ran-binding protein 9[209 aa] | A | 66.7 /34.2 |
3 /9 |
RANB9_HUMAN Ran-binding protein 9 | |
2zu6[1] | F | IF4A1_HUMAN Eukaryotic initiation factor 4A-I[271 aa] | D | 100.0 /33.9 |
1 /1 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
3fho[2] | B | DBP5_SCHPO ATP-dependent RNA helicase dbp5[306 aa] | A | 33.3 /35.6 |
3 /16 |
DBP5_SCHPO ATP-dependent RNA helicase dbp5 | |
5suq[2] | C | SUB2_YEAST ATP-dependent RNA helicase SUB2[374 aa] | A | 36.4 /32.0 |
11 /12 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
4w7s[2] | B | PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | A | 40.0 /32.0 |
15 /20 |
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
740 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1vec[2] | D |
TLA
L(+)-TARTARIC ACID[10 atoms] |
B | 83.3 /39.3 |
6 /6 |
DDX6_HUMAN ATP-dependent RNA helicase p54 | |
2pl3[1] | D |
EOH
ETHANOL[3 atoms] |
A | 66.7 /38.9 |
3 /3 |
DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 | |
2pl3[1] | E |
EOH
ETHANOL[3 atoms] |
A | 0.0 /38.9 |
1 /1 |
DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 | |
2pl3[1] | G |
EOH
ETHANOL[3 atoms] |
A | 50.0 /38.9 |
6 /6 |
DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 | |
3ly5[2] | F |
SCN
THIOCYANATE ION[3 atoms] |
A | 75.0 /38.5 |
4 /4 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
1hv8[2] | C |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /36.2 |
5 /5 |
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669 | |
1hv8[1] | D |
SO4
SULFATE ION[5 atoms] |
A | 0.0 /36.2 |
3 /3 |
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669 | |
1hv8[2] | E |
SO4
SULFATE ION[5 atoms] |
A | 50.0 /36.2 |
4 /5 |
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669 | |
1hv8[2] | F |
SO4
SULFATE ION[5 atoms] |
A | 33.3 /36.2 |
3 /3 |
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669 | |
1hv8[2] | G |
SO4
SULFATE ION[5 atoms] |
A | 0.0 /36.2 |
1 /1 |
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669 | |
1qde[1] | B |
SO4
SULFATE ION[5 atoms] |
A | 66.7 /37.8 |
6 /6 |
IF4A_YEAST TRANSLATION INITIATION FACTOR 4A | |
1wrb[3] | C |
SO4
SULFATE ION[5 atoms] |
A | 85.7 /37.2 |
7 /7 |
O97032_DUGJA DjVLGB | |
1wrb[14] | D |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /37.2 |
1 /1 |
O97032_DUGJA DjVLGB | |
2rb4[2] | E |
SO4
SULFATE ION[5 atoms] |
A | 0.0 /41.7 |
2 /2 |
DDX25_HUMAN ATP-dependent RNA helicase DDX25 | |
3fe2[2] | C |
SO4
SULFATE ION[5 atoms] |
A | 83.3 /37.1 |
6 /6 |
DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 | |
3fe2[1] | G |
SO4
SULFATE ION[5 atoms] |
B | 0.0 /37.1 |
3 /3 |
DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 | |
3mwj[11] | C |
SO4
SULFATE ION[5 atoms] |
A | 85.7 /36.7 |
7 /7 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
3mwj[3] | D |
SO4
SULFATE ION[5 atoms] |
A | 0.0 /36.7 |
2 /2 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
4kbg[2] | D |
SO4
SULFATE ION[5 atoms] |
A | 0.0 /37.1 |
7 /7 |
Q72GF3_THET2 Heat resistant RNA dependent ATPase | |
4nho[1] | F |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /34.4 |
2 /3 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
6f9s[2] | D |
SO4
SULFATE ION[5 atoms] |
A | 25.0 /39.6 |
4 /4 |
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 | |
7ddx[1] | F |
SO4
SULFATE ION[5 atoms] |
B | 0.0 /32.8 |
2 /2 |
IF4A1_MOUSE Eukaryotic initiation factor 4A-I | |
7ddx[1] | G |
SO4
SULFATE ION[5 atoms] |
B | 80.0 /32.8 |
5 /5 |
IF4A1_MOUSE Eukaryotic initiation factor 4A-I | |
7ddx[1] | H |
SO4
SULFATE ION[5 atoms] |
B | 80.0 /32.8 |
5 /5 |
IF4A1_MOUSE Eukaryotic initiation factor 4A-I | |
8arp[6] | H |
SO4
SULFATE ION[5 atoms] |
A | 0.0 /38.5 |
1 /1 |
DBP2_YEAST ATP-dependent RNA helicase DBP2 | |
8arp[5] | W |
SO4
SULFATE ION[5 atoms] |
A | 0.0 /38.5 |
1 /1 |
DBP2_YEAST ATP-dependent RNA helicase DBP2 | |
8arp[1] | S |
SO4
SULFATE ION[5 atoms] |
E | 100.0 /38.5 |
4 /4 |
DBP2_YEAST ATP-dependent RNA helicase DBP2 | |
8arp[1] | T |
SO4
SULFATE ION[5 atoms] |
E | 0.0 /38.5 |
2 /2 |
DBP2_YEAST ATP-dependent RNA helicase DBP2 | |
2gxs[1] | J |
GOL
GLYCEROL[6 atoms] |
B | 80.0 /37.1 |
5 /5 |
O07897_THETH heat resistant RNA dependent ATPase | |
2way[3] | E |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /38.3 |
5 /5 |
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6 | |
2way[1] | F |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /38.3 |
3 /6 |
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6 | |
2way[2] | G |
GOL
GLYCEROL[6 atoms] |
A | 25.0 /38.3 |
4 /5 |
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6 | |
3dkp[1] | E |
GOL
GLYCEROL[6 atoms] |
A | 75.0 /36.0 |
4 /4 |
DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 | |
3fht[2] | F |
GOL
GLYCEROL[6 atoms] |
A | 14.3 /35.0 |
7 /9 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
3fht[1] | J |
GOL
GLYCEROL[6 atoms] |
B | 50.0 /35.7 |
6 /6 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
3fht[1] | K |
GOL
GLYCEROL[6 atoms] |
B | 50.0 /35.7 |
2 /2 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
3g0h[1] | E |
GOL
GLYCEROL[6 atoms] |
A | 20.0 /35.0 |
5 /7 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
3peu[4] | D |
GOL
GLYCEROL[6 atoms] |
A | 57.1 /46.0 |
7 /7 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
3pey[1] | K |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /34.7 |
4 /4 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
4c9b[1] | E |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /34.0 |
1 /1 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
4c9b[1] | F |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /34.0 |
4 /4 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
4c9b[1] | G |
GOL
GLYCEROL[6 atoms] |
A | 71.4 /34.0 |
7 /7 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
4c9b[1] | H |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /34.0 |
3 /3 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
4c9b[1] | I |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /34.0 |
4 /4 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
4c9b[1] | J |
GOL
GLYCEROL[6 atoms] |
A | 66.7 /34.0 |
6 /6 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
4c9b[1] | K |
GOL
GLYCEROL[6 atoms] |
A | 40.0 /34.0 |
5 /5 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
4crw[1] | C |
GOL
GLYCEROL[6 atoms] |
B | 50.0 /39.6 |
2 /2 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
4crw[1] | G |
GOL
GLYCEROL[6 atoms] |
B | 0.0 /39.6 |
5 /5 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
4crw[1] | H |
GOL
GLYCEROL[6 atoms] |
B | 20.0 /39.6 |
5 /6 |
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6 | |
4d25[1] | E |
GOL
GLYCEROL[6 atoms] |
A | 33.3 /36.5 |
3 /3 |
O01378_BOMMO BMVLG PROTEIN | |
4nho[1] | G |
GOL
GLYCEROL[6 atoms] |
A | 33.3 /34.4 |
6 /6 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
4nho[1] | H |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /34.4 |
1 /4 |
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 | |
4w7s[1] | H |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /32.0 |
2 /2 |
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | |
6kim[1] | E |
GOL
GLYCEROL[6 atoms] |
A | 25.0 /30.8 |
4 /6 |
I3VR32_PLUXY Ryanodine receptor | |
6l5o[1] | D |
GOL
GLYCEROL[6 atoms] |
A | 50.0 /35.0 |
2 /5 |
DDX21_HUMAN Nucleolar RNA helicase 2 | |
7dtk[1] | D |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /37.7 |
3 /3 |
CGH1_CAEEL ATP-dependent RNA helicase cgh-1 | |
7dtk[1] | D |
GOL
GLYCEROL[6 atoms] |
B | 33.3 /37.7 |
3 /3 |
CGH1_CAEEL ATP-dependent RNA helicase cgh-1 | |
7dtk[1] | E |
GOL
GLYCEROL[6 atoms] |
B | 0.0 /37.7 |
5 /5 |
CGH1_CAEEL ATP-dependent RNA helicase cgh-1 | |
2gxq[4] | C |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
A | 0.0 /37.1 |
4 /4 |
O07897_THETH heat resistant RNA dependent ATPase | |
3i62[1] | D |
ALF
TETRAFLUOROALUMINATE ION[5 atoms] |
A | 100.0 /36.0 |
8 /8 |
MS116_YEAST ATP-dependent RNA helicase MSS116 | |
4brw[1] | C |
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] |
A | 0.0 /35.5 |
5 /5 |
DHH1_YEAST ATP-DEPENDENT RNA HELICASE DHH1 | |
4brw[1] | D |
1PE
PENTAETHYLENE GLYCOL[16 atoms] |
A | 50.0 /35.5 |
8 /9 |
DHH1_YEAST ATP-DEPENDENT RNA HELICASE DHH1 | |
1t6n[2] | C |
FLC
CITRATE ANION[13 atoms] |
A | 57.1 /35.1 |
7 /7 |
UAP56_HUMAN Probable ATP-dependent RNA helicase | |
4ct5[2] | C |
ACT
ACETATE ION[4 atoms] |
A | 25.0 /36.0 |
4 /4 |
DDX6_HUMAN DDX6 | |
6s8r[1] | C |
ACT
ACETATE ION[4 atoms] |
A | 50.0 /34.9 |
2 /2 |
DDX6_DROME ATP-dependent RNA helicase me31b | |
6s8r[1] | E |
ACT
ACETATE ION[4 atoms] |
A | 0.0 /34.9 |
1 /3 |
DDX6_DROME ATP-dependent RNA helicase me31b | |
6s8r[1] | F |
ACT
ACETATE ION[4 atoms] |
A | 50.0 /34.9 |
2 /3 |
DDX6_DROME ATP-dependent RNA helicase me31b | |
3pew[3] | H |
NO3
NITRATE ION[4 atoms] |
A | 25.0 /35.0 |
4 /4 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
3pew[1] | I |
NO3
NITRATE ION[4 atoms] |
A | 20.0 /35.0 |
5 /5 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
3pew[2] | K |
NO3
NITRATE ION[4 atoms] |
A | 33.3 /35.0 |
3 /3 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
3pew[2] | L |
NO3
NITRATE ION[4 atoms] |
A | 0.0 /35.0 |
1 /1 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
3pey[1] | I |
NO3
NITRATE ION[4 atoms] |
A | 0.0 /34.7 |
2 /2 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
5elx[1] | G |
NO3
NITRATE ION[4 atoms] |
A | 25.0 /34.7 |
4 /4 |
DBP5_YEAS7 ATP-dependent RNA helicase DBP5 | |
3ex7[2] | L |
AF3
ALUMINUM FLUORIDE[4 atoms] |
C | 87.5 /34.4 |
8 /8 |
IF4A3_HUMAN Eukaryotic initiation factor 4A-III | |
5zbz[1] | C |
MLI
MALONATE ION[7 atoms] |
A | 57.1 /33.9 |
7 /7 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
6b4k[2] | E |
MLI
MALONATE ION[7 atoms] |
A | 42.9 /35.1 |
7 /7 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
6b4k[1] | F |
MLI
MALONATE ION[7 atoms] |
A | 75.0 /35.1 |
4 /4 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
1xtk[1] | B |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
A | 50.0 /34.1 |
2 /2 |
UAP56_HUMAN Probable ATP-dependent RNA helicase p47 | |
1xtj[1] | D |
ACY
ACETIC ACID[4 atoms] |
A | 33.3 /33.5 |
3 /4 |
UAP56_HUMAN Probable ATP-dependent RNA helicase p47 | |
2zu6[1] | I |
ACY
ACETIC ACID[4 atoms] |
A | 0.0 /33.5 |
1 /1 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
2zu6[1] | K |
ACY
ACETIC ACID[4 atoms] |
D | 50.0 /33.9 |
2 /2 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
1xti[1] | B |
IPA
ISOPROPYL ALCOHOL[4 atoms] |
A | 37.5 /33.8 |
8 /8 |
UAP56_HUMAN Probable ATP-dependent RNA helicase p47 | |
1xti[1] | C |
IPA
ISOPROPYL ALCOHOL[4 atoms] |
A | 33.3 /33.8 |
3 /6 |
UAP56_HUMAN Probable ATP-dependent RNA helicase p47 | |
1xti[1] | D |
IPA
ISOPROPYL ALCOHOL[4 atoms] |
A | 66.7 /33.8 |
3 /3 |
UAP56_HUMAN Probable ATP-dependent RNA helicase p47 | |
1xti[1] | E |
IPA
ISOPROPYL ALCOHOL[4 atoms] |
A | 75.0 /33.8 |
4 /4 |
UAP56_HUMAN Probable ATP-dependent RNA helicase p47 | |
3i61[1] | D |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
A | 100.0 /36.0 |
7 /7 |
MS116_YEAST ATP-dependent RNA helicase MSS116 | |
3pew[4] | E |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
A | 87.5 /35.0 |
8 /8 |
DBP5_YEAST ATP-dependent RNA helicase DBP5 | |
4tyn[4] | D |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
B | 100.0 /36.0 |
5 /5 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
4tyw[1] | E |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
A | 100.0 /36.0 |
8 /8 |
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial | |
5elx[1] | E |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
A | 87.5 /34.7 |
8 /8 |
DBP5_YEAS7 ATP-dependent RNA helicase DBP5 | |
5sup[3] | K |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
A | 77.8 /31.8 |
9 /9 |
SUB2_YEAST ATP-dependent RNA helicase SUB2 | |
6uv1[5] | F |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
A | 100.0 /38.0 |
8 /8 |
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 | |
7pli[12] | N |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
A | 100.0 /36.5 |
7 /7 |
DBPA_ECOLI ATP-dependent RNA helicase DbpA | |
5jia[8] | Q |
IMD
IMIDAZOLE[5 atoms] |
A | 0.0 /33.6 |
3 /4 |
RBP10_MOUSE Ran-binding protein 10 | |
2gxu[2] | B |
PO4
PHOSPHATE ION[5 atoms] |
A | 83.3 /37.1 |
6 /6 |
O07897_THETH heat resistant RNA dependent ATPase | |
2wax[2] | H |
PO4
PHOSPHATE ION[5 atoms] |
A | 50.0 /39.6 |
4 /4 |
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6 | |
2wax[4] | I |
PO4
PHOSPHATE ION[5 atoms] |
A | 0.0 /39.6 |
4 /4 |
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6 | |
3ber[5] | B |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /39.2 |
4 /4 |
DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 | |
3ly5[1] | C |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /38.5 |
6 /6 |
DDX18_HUMAN ATP-dependent RNA helicase DDX18 | |
4c9b[1] | C |
PO4
PHOSPHATE ION[5 atoms] |
A | 66.7 /34.0 |
6 /6 |
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III | |
4d26[1] | D |
PO4
PHOSPHATE ION[5 atoms] |
A | 88.9 /36.5 |
9 /9 |
O01378_BOMMO BMVLG PROTEIN | |
4pxa[3] | C |
PO4
PHOSPHATE ION[5 atoms] |
A | 71.4 /34.7 |
7 /7 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
4pxa[1] | G |
PO4
PHOSPHATE ION[5 atoms] |
A | 0.0 /34.7 |
3 /4 |
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X | |
6b4i[4] | J |
PO4
PHOSPHATE ION[5 atoms] |
E | 75.0 /34.7 |
4 /5 |
DD19B_HUMAN ATP-dependent RNA helicase DDX19B | |
6s8s[2] | G |
PO4
PHOSPHATE ION[5 atoms] |
A | 0.0 /39.6 |
4 /4 |
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 | |
6s8s[1] | H |
PO4
PHOSPHATE ION[5 atoms] |
A | 0.0 /39.6 |
1 /3 |
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 | |
6s8s[1] | I |
PO4
PHOSPHATE ION[5 atoms] |
A | 33.3 /39.6 |
6 /6 |
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 | |
7pmq[3] | U |
PO4
PHOSPHATE ION[5 atoms] |
A | 0.0 /36.5 |
1 /1 |
W8TF60_ECOLX ATP-dependent RNA helicase DbpA | |
8iju[1] | C |
PO4
PHOSPHATE ION[5 atoms] |
A | 62.5 /32.8 |
8 /8 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | D |
PO4
PHOSPHATE ION[5 atoms] |
A | 33.3 /32.8 |
6 /6 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
2zu6[1] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 33.3 /33.5 |
3 /3 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
2zu6[1] | H |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 60.0 /33.5 |
10 /10 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
2zu6[1] | J |
EDO
1,2-ETHANEDIOL[4 atoms] |
D | 50.0 /33.9 |
4 /4 |
IF4A1_HUMAN Eukaryotic initiation factor 4A-I | |
8iju[2] | E |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 20.0 /32.8 |
5 /5 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /32.8 |
3 /3 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 50.0 /32.8 |
4 /4 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | H |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 25.0 /32.8 |
4 /7 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[2] | I |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 37.5 /32.8 |
8 /8 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | K |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /32.8 |
4 /4 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | L |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 66.7 /32.8 |
3 /3 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | M |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 33.3 /32.8 |
6 /6 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | N |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 33.3 /32.8 |
3 /4 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | O |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 33.3 /32.8 |
3 /5 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | P |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /32.8 |
2 /2 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | Q |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 20.0 /32.8 |
5 /5 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | R |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /32.8 |
1 /1 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | S |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /32.8 |
2 /3 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
8iju[1] | T |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /32.8 |
1 /2 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
3ber[1] | D |
PGE
TRIETHYLENE GLYCOL[10 atoms] |
A | 42.9 /39.2 |
7 /7 |
DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 | |
3ber[1] | E |
PGE
TRIETHYLENE GLYCOL[10 atoms] |
A | 33.3 /39.2 |
3 /8 |
DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 | |
8iju[1] | B |
PGE
TRIETHYLENE GLYCOL[10 atoms] |
A | 44.4 /32.8 |
9 /9 |
DX39A_HUMAN ATP-dependent RNA helicase DDX39A | |
4ljy[1] | D |
MRD
(4R)-2-METHYLPENTANE-2,4-DIOL[8 atoms] |
A | 0.0 /32.3 |
2 /5 |
PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP.. | |
4ljy[1] | E |
MRD
(4R)-2-METHYLPENTANE-2,4-DIOL[8 atoms] |
A | 0.0 /32.3 |
2 /3 |
PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP.. | |
4w7s[2] | C |
P6G
HEXAETHYLENE GLYCOL[13 atoms] |
A | 0.0 /32.0 |
5 /7 |
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | |
4w7s[1] | D |
P6G
HEXAETHYLENE GLYCOL[7 atoms] |
A | 0.0 /32.0 |
3 /4 |
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | |
4w7s[1] | E |
P6G
HEXAETHYLENE GLYCOL[7 atoms] |
A | 40.0 /32.0 |
5 /5 |
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | |
4w7s[2] | F |
P6G
HEXAETHYLENE GLYCOL[12 atoms] |
A | 0.0 /32.0 |
2 /7 |
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | |
4w7s[1] | G |
P6G
HEXAETHYLENE GLYCOL[10 atoms] |
A | 33.3 /32.0 |
3 /3 |
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | |
4w7s[1] | G |
P6G
HEXAETHYLENE GLYCOL[10 atoms] |
B | 20.0 /31.9 |
5 /5 |
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |