Protein Model on 6s8r_A_1_B_1
(TEMPLATE: 
6s8r
)Protein Model on 6s8r_A_1_B_1
(TEMPLATE: 6s8r
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DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [167 aa] | ATP-dependent RNA helicase me31b :DDX6_DROME | |
| 2 | b | B 1 (B) | polymer(polypeptide(L)) [27 aa] | GIGYF family protein CG11148 :GGYF1_DROME | 516K(T) 517I(Q) 518D(R) 521N(L) 522L 525Y(K) 528Q(E) 529Q(L) 590V(F) (identity: 11.1 %/34.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6s8r_A_1 identity=34.9% |
queryA 505:KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG: 604
: * **** * * * * * * * * * * * **** * *** * * ****:
6s8r_A_1 35:QINQSIIFCNSTQRVELLAKKITELG---------YCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIG: 125
SecStr : SEEEEE SSHHHHHHHHHHHHHHT--------- EEE TTS HHHHHHHHHHHHHTSSSEEEE TT TTEEEEEESS SSHHHHHHHH :
ExpBur :ebebbbbbbeeeeebeebbeebeeee---------eebeebbeebeeeebeebeeebeeeebebbbbbebeeeeeebeebbbbbbbbbbeebebbeebbb:
Contact : bbb bb b bb b
queryA 605:RVGRAERMGLAISLVATE: 622
:* ** * ** * *:
6s8r_A_1 126:RSGRFGHLGIAINLITYE: 143
SecStr :BSSSSS EEEEEEE GG:
ExpBur :beeeeeeebbbbbbbbee:
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[assembly_id:1]
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