Protein Model on 4nho_A_1_F_1 (TEMPLATE: 4nho )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [443 aa] Probable ATP-dependent RNA helicase DDX23 :DDX23_HUMAN
2 b F 1 (A) non-polymer(SO4) SULFATE ION 457E 469V (identity: 100.0 %/33.2 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4nho_A_1 identity=33.2%
queryA         1:MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100
                :          * *           ** **   **  *   *    ******** ** **                                         :
4nho_A_1      58:IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLL---------------------------------------: 118
SecStr          : S TTTS   HHHHHHHHHHT  S  HHHHHHHHHHTTT  EEEE  TTSSHHHHHHHHHH---------------------------------------:    
ExpBur          :bbebeebebeeebeebbeeeebeebeebbbbbbbbbebbbbbbbbbeeeeebbbbbbbbbb---------------------------------------:    

queryA       101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200
                :                                                                                                    :
4nho_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------------: 286
                :                                                                                                    :
4nho_A_1     119:--------------------------------------------------------------------------------------VWITTLPKIDRIEE: 132
SecStr          :--------------------------------------------------------------------------------------HHHHHS HHHH  S:    
ExpBur          :--------------------------------------------------------------------------------------bbbbebeeeeeeee:    

queryA       287:----PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD: 382
                :    * * *  * **** *       * *       *    ***    **   *  *  **  ***** *      * **     ******     *   :
4nho_A_1     133:SDQGPYAIILAPTRELAQQIEEETIKFGKPLG---IRTVAVIGGISREDQGFRLRMGUEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEP: 229
SecStr          :S    SEEEE SSHHHHHHHHHHHHHHHGGGT---  EEEE SSS HHHHHHHHHT  SEEEE HHHHHHHHHTTSS  TT  EEEESSHHHHHHTT HH:    
ExpBur          :eeebbbbbbbbbeeebbeebeeebeebbeebe---bebbbbbeeeeeeebeeebeebbbbbbbbbebbbebbeeeebebebbbbbbbbbbbebbeeeebe:    

queryA       383:FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV--KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN: 480
                :         *                 *  *     *     *   *          *  *               ***  *  *   *         * :
4nho_A_1     230:DVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTAT---------MPPAV---------------ERLARSYLRRPAVVYIGS----AG: 301
SecStr          :HHHHHHTTS GGGS  SSGGGG HHHHHHHHHTGGG   EEEEEES ---------  HHH---------------HHHHHHH SS EEEEE  ----TT:    
ExpBur          :ebeebbeebeeeebbeeeeebbebeebeebbeebeebebbbbbbbee---------beebb---------------eebbeebbeeebbbbeeb----ee:    
Contact         :                                                                            b           b           

queryA       481:SPEMWSEAIKILKGEYAVR----AIKEHKMDQA-IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA: 575
                : *    *    *  *   *    ** *   *   ***   *  ** *       *              *        *   *   * *    *  *** :
4nho_A_1     302:KPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMG---------YNACTLXXXXXXXXREFALSNLKAGAKDILVATDVX: 392
SecStr          : HHHHSEEEEEE  GGGHHHHHHHHHHT   S EEEE SSHHHHHHHHHHHHHTT---------  EEE -------- HHHHHHHHHTS  EEEE   -:    
ExpBur          :ebbebbbbebeebeeeebeeebeebbeeeeeebbbbbbeeeeebeebbeebeeee---------bebbee--------eeebbeebeeeeeebbbbbee-:    

queryA       576:ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV: 630
                :   ***  *  * *         * ***** ***   * **     *   * *  :
4nho_A_1     393:XXXIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYEL: 447
SecStr          :---      SEEEESS  SSHHHHHHHHGGG SSEE  EEEEEE GGGGGGHHHH:    
ExpBur          :---eeeeebebbbbbbbbeebeebbebbeebbebbebbebbbbbbeebeebbeeb:    


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