[pdbjlvh2]Protein Model on 2zu6_A_1_H

Protein Model on 2zu6_A_1_H_1 (TEMPLATE: 2zu6 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [343 aa]	Eukaryotic initiation factor 4A-I :IF4A1_HUMAN
2	b		H 1 (A)	non-polymer(EDO)	1,2-ETHANEDIOL	261A 262P(Q) 263D(S) 266I(T) 370D 371E 373D 406C(L) 407S 408A (identity: 60.0 %/32.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2zu6_A_1 identity=32.7%

queryA       249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347
                : *   *      *  *   *          *      *  **   * **** *          *           ***   *     *      * ****:
2zu6_A_1      46:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 141
SecStr          :S    S  EEEE  TT-STTSHHHHHHHHTT  TT  S  EEEE SSHHHHHHHHHHHHHHHHHHT  EEE---   STTHHHHHHHHHHH  SEEEE H:    
ExpBur          :eeeeeeebbbbebeeb-bbebeebbbebbebbeeeeebbbbbbbbbeeebbeebbeebbeebeeeebebbb---bebeeeeeebbeebeeeebbbbbbbb:    
Contact         :            bbb  b                                                                                  

queryA       348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447
                :**  *      *        ******  ** *  * *          *      **   ***  * **     * *  *     * *             :
2zu6_A_1     142:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 234
SecStr          :HHHHHHHTTTSS STT  EEEEETHHHHHHTT HHHHHHHHHTS TT ------EEEEEESS  H-HHHHHHHHH SS EEEEE    EESTTEEEEEE :    
ExpBur          :eebeebbeeeebeeeebebbbbbbbbebbeeebeeebeebeeebeeeb------bbbbbbeeeee-ebeebbeebbeeeeebbeeeeeeebeebebbebe:    
Contact         :                      bb b                                bbb                                       

queryA       448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547
                :*        **                        * *      *   *    *      ** **  *    * *                 *     * :
2zu6_A_1     235:V--------ER------------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHX: 286
SecStr          : --------SS------------------------HHHH--HHHHHHHHHHTT S-----SEEEE S HHHHHHHHHTT---------TTTT   EE  -:    
ExpBur          :b--------ee------------------------eeeb--bebbbebbeeeebe-----ebbbbbeeeeebeebbeeb---------eeeebebeebe-:    

queryA       548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
                :      *      *  *  * ** **  *****   *  ***  **    ** ***** **    * **  *  *                ***   *:
2zu6_A_1     287:XXXXXXRDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGXKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 379
SecStr          :------ HHHHHTGGGSSS EEEE HHHHTTS TTS SEEEESS  SSTHHHHHHH EETTT - EEEEEE  HHHHHHHHHH-----HHHHT   EE:    
ExpBur          :------eeeeeeeeeeeeeebebbbbebbeebebbebebbbbbbbbeeeebbbebbbbbeeee-ebebbbbbbeeeeeebeeb-----beebebebee:

Protein Model on 2zu6_A_1_H_1 (TEMPLATE: 2zu6 )

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