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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [207 aa] | Probable ATP-dependent RNA helicase :UAP56_HUMAN | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [207 aa] | Probable ATP-dependent RNA helicase :UAP56_HUMAN | 296R 300E(F) 303L(S) 304N(K) 307K(E) 308Q(R) 310K(S) 311K 313I(M) 314D(P) 315N 331D(K) 334S(E) 335V 338N (identity: 33.3 %/35.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1t6n_A_1 identity=35.1% |
queryA 2:AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA: 101 : * ** * * * * ** * *** * * *** * * : 1t6n_A_1 14:SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQ---------------------------------------: 74 SecStr : STTS HHHHHHHHHTT HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHH---------------------------------------: ExpBur :ebbeebebeeebeebbeeeeeeebbebbeebbeebbeeebbbbbbeeeeebbbbbbbbbbb---------------------------------------: queryA 102:FAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKG: 201 : : 1t6n_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 202:HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK----------ALI: 291 : * : 1t6n_A_1 75:---------------------------------------------------------------------------------------QLEPVTGQVSVLV: 87 SecStr :---------------------------------------------------------------------------------------H TT EEE: ExpBur :---------------------------------------------------------------------------------------ebeeeeeebbbbb: queryA 292:VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ: 390 : **** * * ** * * ** ** * ******** * *** *** * * * * : 1t6n_A_1 88:MCHTRELAFQISKEYERFSKYMPNVKVA--VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQE: 182 SecStr :E S HHHHHHHHHHHHHHTTTSTT EE--EES S HHHHHHHHHHS SEEEE HHHHHHHHHTTSS TT EEEEESHHHHHSSHH---HHHHHHH: ExpBur :bbeeeeebeebbeebeebbeebeebeeb--bbbeeeeeeebbeebeeebbbbbbbbbebbbebbeeeebebeebebbbbbbbbebbeeee---beeebee: Contact : b b bb bb bb bbb b bb bb queryA 391:IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV: 429 :* * * ** **** * * * * : 1t6n_A_1 183:IFRMTPHEK--QVMMFSATL-SKEIRPVCRKFMQDPMEI: 218 SecStr :HHHTS SSS--EEEEEES - TTTHHHHHTT SS EEE: ExpBur :beeebeeeb--bbbbbbeeb-eeebbebbeebbeebbeb: |