Protein Model on 1t6n_A_1_B_1 (TEMPLATE: 1t6n )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [207 aa] Probable ATP-dependent RNA helicase :UAP56_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [207 aa] Probable ATP-dependent RNA helicase :UAP56_HUMAN 296R 300E(F) 303L(S) 304N(K) 307K(E) 308Q(R) 310K(S) 311K 313I(M) 314D(P) 315N 331D(K) 334S(E) 335V 338N (identity: 33.3 %/35.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1t6n_A_1 identity=35.1%
queryA         2:AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA: 101
                :  *      **   *        *   * * **    * ***  *  * ***  *     *                                       :
1t6n_A_1      14:SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQ---------------------------------------:  74
SecStr          :  STTS   HHHHHHHHHTT     HHHHHHHHHHHTT  EEEE  TTS HHHHHHHHHHH---------------------------------------:    
ExpBur          :ebbeebebeeebeebbeeeeeeebbebbeebbeebbeeebbbbbbeeeeebbbbbbbbbbb---------------------------------------:    

queryA       102:FAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKG: 201
                :                                                                                                    :
1t6n_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       202:HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK----------ALI: 291
                :                                                                                                  * :
1t6n_A_1      75:---------------------------------------------------------------------------------------QLEPVTGQVSVLV:  87
SecStr          :---------------------------------------------------------------------------------------H    TT   EEE:    
ExpBur          :---------------------------------------------------------------------------------------ebeeeeeebbbbb:    

queryA       292:VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ: 390
                :    **** *       * **  * *       **        **  *   ********   *     ***       *** *  * *       *    :
1t6n_A_1      88:MCHTRELAFQISKEYERFSKYMPNVKVA--VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQE: 182
SecStr          :E S HHHHHHHHHHHHHHTTTSTT  EE--EES  S HHHHHHHHHHS  SEEEE HHHHHHHHHTTSS  TT  EEEEESHHHHHSSHH---HHHHHHH:    
ExpBur          :bbeeeeebeebbeebeebbeebeebeeb--bbbeeeeeeebbeebeeebbbbbbbbbebbbebbeeeebebeebebbbbbbbbebbeeee---beeebee:    
Contact         :    b   b  bb  bb bb bbb               b  bb  bb                                                    

queryA       391:IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV: 429
                :*   *   *  **   **** *        * *  *   :
1t6n_A_1     183:IFRMTPHEK--QVMMFSATL-SKEIRPVCRKFMQDPMEI: 218
SecStr          :HHHTS SSS--EEEEEES  - TTTHHHHHTT SS EEE:    
ExpBur          :beeebeeeb--bbbbbbeeb-eeebbebbeebbeebbeb:    


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