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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [389 aa] | ATP-dependent RNA helicase DBP5 :DBP5_YEAST | |
2 | b | D 1 (A) | non-polymer(IHP) | INOSITOL HEXAKISPHOSPHATE | 38G(H) 39G(N) (identity: 0.0 %/35.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3rrn_A_1 identity=35.0% |
queryA 3:AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS: 100 : * * * ** * * ** ** * * *** *** : 3rrn_A_1 6:SFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTML---------------------------------------: 66 SecStr :STTTTT HHHHHHHHHTT S HHHHHHHHHHS SS EEE TTSSHHHHHHHHHH---------------------------------------: ExpBur :ebeebebeeebbebbeebeeeebbebbbebbbebbeeeeeebbbbbebeebbbbbbbbbbb---------------------------------------: Contact : bb queryA 101:AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK: 200 : : 3rrn_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 201:GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--------APKALIV: 292 : * * : 3rrn_A_1 67:-------------------------------------------------------------------------------------TRVNPEDASPQAICL: 81 SecStr :-------------------------------------------------------------------------------------HT SSS S EEEE: ExpBur :-------------------------------------------------------------------------------------ebbeeeeebbbbbbb: queryA 293:EPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQI: 391 : ****** *** * * ** ***** ** * ****** * ** * * : 3rrn_A_1 82:APSRELARQTLEVVQEMGKFT---KITSQLIVPDSFEKNK----QINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFL: 174 SecStr : SSHHHHHHHHHHHHHHTTSS--- EEEESTTSS SS ---- SEEEE HHHHHHHHHTTSS SS EEEES HHHHHHSTTHHHHHHHHHHTS: ExpBur :bbeeebbeebbebbeebbeeb---ebeeebbbeeebeeee----ebebbbbbbbbebbbebbeeebbebeebebbbbbbbbbbeeeebbbeebbebeeeb: queryA 392:PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI: 491 :* * * *** * ** * * * : 3rrn_A_1 175:PKDT------QLVLFSATFAD-AVRQYAKKIVPNANTLELQXXXXXXDAIKQLYMDCKNEADKF----------------------------------DV: 233 SecStr : TTS------EEEEE S H-HHHHHHHHHSTT EEE ------ EEEEEEE SSTTHHH----------------------------------HH: ExpBur :beeb------bbbbbbbebee-ebeebbeebbeebeebeee------eebbbbbbebeeeeebb----------------------------------eb: queryA 492:LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT: 591 :* * * * *** ** * * ** * **** ** * * ** * * ****** * * * : 3rrn_A_1 234:LTELYGVMTIGS-----SIIFVATKKTANVLY-------GKLKSEGHEVSI--LHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYD: 319 SecStr :HHHHTTSS SE-----EEEE S HHHHHHHH-------HHHHTTT EEE--E SSS HHHHHHHHHHHHTTS SEEEE S SS S EEEEEESS: ExpBur :bbebbebbeeeb-----bbbbbeeeebbeebe-------eebeeeeeebbb--bbeeeeeeebeebbebbeeeebebbbbbeebeebbebeebebbbbbb: queryA 592:LPD------EKQNYVHRIGRVGRAERMGLAISLV: 619 :** * ***** ** * * *** *: 3rrn_A_1 320:LPTLANGQADPATYIHRIGRTGRFGRKGVAISFV: 353 SecStr : B TTS B HHHHHHHHTTSS TT EEEEEEE: ExpBur :bbeeeeeebbbeebeebbebbbbeeeebbbbbbb: |