Protein Model on 2zu6_D_1_F_1 (TEMPLATE: 2zu6 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) D 1 (D) polymer(polypeptide(L)) [345 aa] Eukaryotic initiation factor 4A-I :IF4A1_HUMAN
2 b F 1 (F) polymer(polypeptide(L)) [271 aa] Eukaryotic initiation factor 4A-I :IF4A1_HUMAN 640N (identity: 100.0 %/32.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2zu6_D_1 identity=32.7%
queryA       249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347
                : *   *      *  *   *          *      *  **   * **** *          *           ***   *     *      * ****:
2zu6_D_1      46:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 141
SecStr          :     S  EEEE  TT- SSSHHHHHHHHTT  TT  S  EEEE SSHHHHHHHHHHHHHTTTTTT  EEE---   STTHHHHHHHHHHH  SEEEE H:    
ExpBur          :eeeeeeebbbbebeee-bbeeeebbbebbebbeeeeebbbbbbbbbeeebbeebbeebbeebeeeebebbb---bebeeeeeebbeebeeeebbbbbbbb:    

queryA       348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447
                :**  *      *        ******  ** *  * *          *      **   ***  * **     * *  *     * *             :
2zu6_D_1     142:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 234
SecStr          :HHHHHHHHTTSS  TT  EEEEESHHHHHHTTTHHHHHHHHHTS TT ------EEEEEESS  H-HHHHHHHHH SS EEEEE    EE TTEEEEEE :    
ExpBur          :eebeebbeeeebeeeebebbbbbbbbebbeeebeeebbebeeebeeeb------bbbbbbbeeee-ebeebbeebbeeeeebeeeeeeeebeebebbebe:    

queryA       448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547
                :*        **                        * *      *   *    *      ** **  *    * *                 *     **:
2zu6_D_1     235:V--------ER------------------------EEWK--LDTLCDLYETLTIX-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG: 286
SecStr          : -------- S------------------------HHHH--HHHHHHHHHHTT ------  EEE S HHHHHHHHHHH---------HTTT S EE   :    
ExpBur          :b--------ee------------------------eeeb--bebbbebbeeeee------ebbbbbeeeeebeebbeeb---------eeeebebeebee:    

queryA       548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645
                :      *      *  *    ** **  *****   *  ***  **    ** ***** **    * **  *  *                ***   *:
2zu6_D_1     287:XXXXXXRDVIMREFRSGSSXVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRXXXKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 379
SecStr          :------ TTTTTTSTTS  - EEE HHHHHTS  TT SEEEESS  SSTTHHHHHH EE  --- EEEEEE  TTTHHHHHHH-----HHHTT   EE:    
ExpBur          :------eeeeeeeeeeeee-bebbbbebbeeeebeeeebbbbbbbbeeeebbbebbbbbee---ebebbbbbbeeeeeebeeb-----beebeeebee:    
Contact         :                                                                                            b       


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