CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [345 aa] | Eukaryotic initiation factor 4A-I :IF4A1_HUMAN | |
2 | b | F 1 (F) | polymer(polypeptide(L)) [271 aa] | Eukaryotic initiation factor 4A-I :IF4A1_HUMAN | 640N (identity: 100.0 %/32.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2zu6_D_1 identity=32.7% |
queryA 249:FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP: 347 : * * * * * * * ** * **** * * *** * * * ****: 2zu6_D_1 46:LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTP: 141 SecStr : S EEEE TT- SSSHHHHHHHHTT TT S EEEE SSHHHHHHHHHHHHHTTTTTT EEE--- STTHHHHHHHHHHH SEEEE H: ExpBur :eeeeeeebbbbebeee-bbeeeebbbebbebbeeeeebbbbbbbbbeeebbeebbeebbeebeeeebebbb---bebeeeeeebbeebeeeebbbbbbbb: queryA 348:GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP: 447 :** * * ****** ** * * * * ** *** * ** * * * * * : 2zu6_D_1 142:GRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN: 234 SecStr :HHHHHHHHTTSS TT EEEEESHHHHHHTTTHHHHHHHHHTS TT ------EEEEEESS H-HHHHHHHHH SS EEEEE EE TTEEEEEE : ExpBur :eebeebbeeeebeeeebebbbbbbbbebbeeebeeebbebeeebeeeb------bbbbbbbeeee-ebeebbeebbeeeeebeeeeeeeebeebebbebe: queryA 448:VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG: 547 :* ** * * * * * ** ** * * * * **: 2zu6_D_1 235:V--------ER------------------------EEWK--LDTLCDLYETLTIX-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG: 286 SecStr : -------- S------------------------HHHH--HHHHHHHHHHTT ------ EEE S HHHHHHHHHHH---------HTTT S EE : ExpBur :b--------ee------------------------eeeb--bebbbebbeeeee------ebbbbbeeeeebeebbeeb---------eeeebebeebee: queryA 548:DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE: 645 : * * * ** ** ***** * *** ** ** ***** ** * ** * * *** *: 2zu6_D_1 287:XXXXXXRDVIMREFRSGSSXVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRXXXKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE: 379 SecStr :------ TTTTTTSTTS - EEE HHHHHTS TT SEEEESS SSTTHHHHHH EE --- EEEEEE TTTHHHHHHH-----HHHTT EE: ExpBur :------eeeeeeeeeeeee-bebbbbebbeeeebeeeebbbbbbbbeeeebbbebbbbbee---ebebbbbbbeeeeeebeeb-----beebeeebee: Contact : b |