Protein Model on 1vec_B_2_A_1 (TEMPLATE: 1vec )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:3]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) B 2 (B) polymer(polypeptide(L)) [206 aa] ATP-dependent RNA helicase p54 :DDX6_HUMAN
2 b A 1 (A) polymer(polypeptide(L)) [206 aa] ATP-dependent RNA helicase p54 :DDX6_HUMAN 329A(L) 330R 333L(I) 334S(M) 337E(D) 356T(K) 357G 360N(K) (identity: 25.0 %/39.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1vec_B_2 identity=39.3%
queryA         4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103
                :*       *      ** *  *  ** ****  * * * *  *  * ** **  **                                            :
1vec_B_2       5:FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE-----------------------------------------:  63
SecStr          :GGGS   HHHHHHHHHHT  S  HHHHTTHHHHHHT  EEEE  SSSTTHHHHHHHHHH-----------------------------------------:    
ExpBur          :beebebeeebbebbeeeeeeebeebbeebbeebbeeebbbbebeeeeebbbbbbbbbbb-----------------------------------------:    

queryA       104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203
                :                                                                                                    :
1vec_B_2      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVEP: 294
                :                                                                                              *    *:
1vec_B_2      64:------------------------------------------------------------------------------------RLDLKKDNIQAMVIVP:  79
SecStr          :------------------------------------------------------------------------------------H  TTS S  EEEE S:    
ExpBur          :------------------------------------------------------------------------------------ebeeeeeebbbbbbbb:    

queryA       295:SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV: 394
                : **** *      *  *     *       **   **    *   *  *  ****  **   *      *   ****** ****   **   *   *   :
1vec_B_2      80:TRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTL: 174
SecStr          :SHHHHHHHHHHHHHHTGGGS   E--EEE TTS HHHHHHHHTS   EEEE HHHHHHHHHTTSS  TT  EEEEESHHHHTST---TTHHHHHHHHHTS:    
ExpBur          :eeebbeebbebbeebbeebeebeb--bebbeeeeeeebeeebeeebbbbbbbbebbbebbeeebbebeebebbbbbbbbebbee---eeeeebeebbeeb:    
Contact         :                                  bb  bb  b                  bb  b                                  

queryA       395:TSDGKRLQVIVCSAT: 409
                :    *  *    ***:
1vec_B_2     175:P---KNRQILLYSAT: 186
SecStr          : ---TT EEEEEES :    
ExpBur          :e---eebbbbbbbee:    


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