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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [207 aa] | Heat resistant RNA dependent ATPase :Q72GF3_THET2 | |
2 | b | I 1 (C) | non-polymer(8OP) | [(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate | 328A(G) 329A(Y) 330R(G) 333L(K) 356T(Q) (identity: 0.0 %/36.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3nbf_C_1 identity=36.7% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* *** * ** * * ** * * * * ** *** ** * * * * * : 3nbf_C_1 3:FKDFPLKPEILEALHGRGLTTPTPIEAAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPS---QERGRKPRALVLT--------------------: 79 SecStr :GGGS HHHHHHHHTTT S HHHHHHHHHHHTT EEEE TTS THHHHHHHHHH --- TT SEEEE --------------------: ExpBur :beebebeeebbeebeeeeeeebeebbeebbeebeeeebbbbbbeeeeebebbbbbbbbeebeee---eeeebebbbbbbb--------------------: queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 3nbf_C_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303 : * ** * **** * : 3nbf_C_1 73:-----------------------------------------------------------------------------------PRALVLTPTRELALQVA: 89 SecStr :----------------------------------------------------------------------------------- SEEEE SSHHHHHHHH: ExpBur :-----------------------------------------------------------------------------------bbbbbbbbeeebbeebb: queryA 304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403 : * * ** * * * * ** **** * * * ** * ****** ** * * * : 3nbf_C_1 90:SELTAVA-----PHLKVVAVYGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEEVEALLSATP------PSRQT: 178 SecStr :HHHHHH -----TTS EEEE SSS SHHHHHHHHH SEEEE HHHHHHHHHHT S TT SEEEEESHHHHHHTT HHHHHHHHHTS ------TTSEE: ExpBur :eebeebb-----eebebbbbebeeeeeebeebbeebbbbbbbbbebbbebeeeebbebeebebbbbbbbbebeeeebeeebeebbeebe------eebbb: Contact : bbb b b queryA 404:IVCSATLHSFDVKKLSEKIMHFPTWVDL: 431 : **** * * * * * * : 3nbf_C_1 179:LLFSATLPSW-AKRLAERYMKNPVLINV: 205 SecStr :EEE SS HH-HHHHHHHS SS EEEE : ExpBur :bbbbeeeeeb-beebbeebbeeeeebee: |