Protein Model on 6l5n_B_1_J_1 (TEMPLATE: 6l5n )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) B 1 (B) polymer(polypeptide(L)) [377 aa] Nucleolar RNA helicase 2 :DDX21_HUMAN
2 b J 1 (B) non-polymer(MG) MAGNESIUM ION 595E(D) (identity: 0.0 %/34.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6l5n_B_1 identity=34.5%
queryA        20:MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW: 119
                :   * *  ***        * *    * ** ***  * ** *      * *   *                                             :
6l5n_B_1      20:VTFLFP--IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGR--------------------------------------------:  73
SecStr          : SS  H--HHHHHHHHHHHT  EEEE  TTS HHHHHHHHHHHHHHTS     TT --------------------------------------------:    
ExpBur          :beeeee--bbeebbebbeeeebbbbbbbbbeebbbbbbbbbbbebbeeeeeeeeeb--------------------------------------------:    

queryA       120:HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIP: 219
                :                                                                                                    :
6l5n_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       220:PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR: 319
                :                                                                  **  *   * **** *         *     ** :
6l5n_B_1      73:-----------------------------------------------------------------RAPQVLVLAPTRELANQVSKDFSDITK-----KLS: 102
SecStr          :-----------------------------------------------------------------   SEEEE SSHHHHHHHHHHHHHT S-----SS :    
ExpBur          :-----------------------------------------------------------------bbbebbbbbbbebbbebbbebbeebbe-----ebb:    

queryA       320:ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS: 419
                :     **     *     ** ** ******  *    *** *      **** *  *  *  *             *     *    ***          :
6l5n_B_1     103:VACFYGGTPYGGQFERURNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQULDUGFADQVEEILSVAYKKDSEDNP-QTLLFSATC---------: 192
SecStr          :EEEE SSS HHHHHHHHHH  SEEEE HHHHHHHHHTTS   TT  EEEEETHHHHTSHHHHHHHHHHHTTT  TT SSS -EEEEEES  ---------:    
ExpBur          :bbbbbbebeeeebeeeeeebbbbbbbbbebbeebeeeeebebeebebbbbbbbbebbeeebbeebeebbeebbeeeeeebb-bbbbbbbbe---------:    

queryA       420:EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC: 519
                :      * **          *   *        *       *  *       *            *             *    *     **** **   :
6l5n_B_1     193:------PHWVFNVAKKYUKSTYEQV--------DLIGKKTQKTAITVEHLAIKCH----------WTQRAAVIGD--VIRVYSGHQ-GRTIIFCETKKEA: 265
SecStr          :------ THHHHHHGGGS TT EEE--------ESS SSS  S TTEEEEEEE  ----------TTTHHHHHHH--HHHHHS SS- EEEEE SSHHHH:    
ExpBur          :------eeebeeebeebbeeeeeeb--------eebeeeeebbbeebebbbbebe----------eeebbeebbe--bbeeebeee-bbbbbbbeeeeeb:    

queryA       520:DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV: 619
                :  * *          *   *     ****     *   *  *  *    *  * ***** **  *  **    *     * ** ** *** * *  *   :
6l5n_B_1     266:QELSQ------NSAIKQDAQ----SLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFY: 355
SecStr          :HHHHH------STTTGGGEE----EESTTS HHHHHHHHHHHHHTS SEEEE GGGSSS   TTEEEEEESS  SSHHHHHHHHTTSSGGG  EEEEEEE:    
ExpBur          :eebbe------eebbeeebe----bbbeebebeebeebbebbeeeebbbbbbbebbbbbbebeebebbbbbbbbeebbbbbbbbbbbbbeeeebbbbbbb:    
Contact         :                                                                           b                        

queryA       620:ATEKE: 624
                :    *:
6l5n_B_1     356:QHKEE: 360
SecStr          : GGGH:    
ExpBur          :beebe:    


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