PSIBLAST 2.11.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Stephen F. Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: uniprot_sprot.fasta 571,282 sequences; 206,678,396 total letters Results from round 1 Query= sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sapiens OX=9606 GN=DDX1 PE=1 SV=2 Length=740 Score E Sequences producing significant alignments: (Bits) Value sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sapi... 1542 0.0 sp|Q4R7L5|DDX1_MACFA ATP-dependent RNA helicase DDX1 OS=Macaca fa... 1538 0.0 sp|Q5NVJ8|DDX1_PONAB ATP-dependent RNA helicase DDX1 OS=Pongo abe... 1537 0.0 sp|Q641Y8|DDX1_RAT ATP-dependent RNA helicase DDX1 OS=Rattus norv... 1518 0.0 sp|Q91VR5|DDX1_MOUSE ATP-dependent RNA helicase DDX1 OS=Mus muscu... 1516 0.0 sp|Q0IIK5|DDX1_BOVIN ATP-dependent RNA helicase DDX1 OS=Bos tauru... 1513 0.0 sp|Q90WU3|DDX1_CHICK ATP-dependent RNA helicase DDX1 OS=Gallus ga... 1417 0.0 sp|Q5XH91|DDX1_XENTR ATP-dependent RNA helicase DDX1 OS=Xenopus t... 1359 0.0 sp|A2VD92|DDX1_XENLA ATP-dependent RNA helicase DDX1 OS=Xenopus l... 1352 0.0 sp|Q9VNV3|DDX1_DROME ATP-dependent RNA helicase Ddx1 OS=Drosophil... 876 0.0 sp|Q55CP6|DDX1_DICDI Probable ATP-dependent RNA helicase ddx1 OS=... 610 0.0 sp|Q24731|DDX1_DROVI ATP-dependent RNA helicase Ddx1 (Fragment) O... 447 2e-150 sp|P25888|RHLE_ECOLI ATP-dependent RNA helicase RhlE OS=Escherich... 180 3e-48 sp|Q0ILZ4|RH9_ORYSJ DEAD-box ATP-dependent RNA helicase 9 OS=Oryz... 168 8e-43 sp|Q19614|SLFL2_CAEEL Schlafen-like protein 2 OS=Caenorhabditis e... 163 1e-42 sp|A0A1D6LAB7|RH3B_MAIZE DEAD-box ATP-dependent RNA helicase 3B, ... 168 2e-42 sp|P27639|IF4A_CAEEL Eukaryotic initiation factor 4A OS=Caenorhab... 161 3e-42 sp|A0A1D6GDY8|RH3A_MAIZE DEAD-box ATP-dependent RNA helicase 3A, ... 166 7e-42 sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3, chloro... 162 3e-40 sp|P9WH05|DEAD_MYCTU ATP-dependent RNA helicase DeaD OS=Mycobacte... 159 4e-40 sp|P9WH04|DEAD_MYCTO ATP-dependent RNA helicase DeaD OS=Mycobacte... 159 4e-40 sp|Q81DF9|CSHE_BACCR DEAD-box ATP-dependent RNA helicase CshE OS=... 155 1e-39 sp|A6SCT6|DBP3_BOTFB ATP-dependent RNA helicase dbp3 OS=Botryotin... 157 2e-39 sp|Q55D61|IF4A_DICDI Eukaryotic initiation factor 4A OS=Dictyoste... 153 3e-39 sp|Q7S5R1|DBP3_NEUCR ATP-dependent RNA helicase dbp-3 OS=Neurospo... 157 4e-39 sp|Q755N4|DBP2_EREGS ATP-dependent RNA helicase DBP2 OS=Eremothec... 155 5e-39 sp|A7EYW0|DBP3_SCLS1 ATP-dependent RNA helicase dbp3 OS=Sclerotin... 155 8e-39 sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyverom... 155 1e-38 sp|Q814I2|DBPA_BACCR ATP-dependent RNA helicase DbpA OS=Bacillus ... 153 1e-38 sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=... 154 2e-38 sp|Q55804|CRHR_SYNY3 RNA helicase CrhR OS=Synechocystis sp. (stra... 152 3e-38 sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Ar... 154 3e-38 sp|A2QFL3|DBP3_ASPNC ATP-dependent RNA helicase dbp3 OS=Aspergill... 152 4e-38 sp|P44586|DEAD_HAEIN ATP-dependent RNA helicase DeaD OS=Haemophil... 154 5e-38 sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase... 152 6e-38 sp|Q12099|FAL1_YEAST ATP-dependent RNA helicase FAL1 OS=Saccharom... 149 9e-38 sp|A6ZXY5|FAL1_YEAS7 ATP-dependent RNA helicase FAL1 OS=Saccharom... 149 9e-38 sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=Or... 152 1e-37 sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozym... 152 1e-37 sp|Q6BT27|FAL1_DEBHA ATP-dependent RNA helicase FAL1 OS=Debaryomy... 148 1e-37 sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=... 152 2e-37 sp|Q9LUW5|RH53_ARATH DEAD-box ATP-dependent RNA helicase 53, mito... 151 3e-37 sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharom... 150 3e-37 sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharom... 150 3e-37 sp|Q8L7S8|RH3_ARATH DEAD-box ATP-dependent RNA helicase 3, chloro... 152 3e-37 sp|Q9M2F9|RH52_ARATH DEAD-box ATP-dependent RNA helicase 52 OS=Ar... 151 4e-37 sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomy... 150 4e-37 sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=Or... 152 4e-37 sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida a... 150 5e-37 sp|A1C5V3|DBP3_ASPCL ATP-dependent RNA helicase dbp3 OS=Aspergill... 149 5e-37 sp|A6RGE3|DBP2_AJECN ATP-dependent RNA helicase DBP2 OS=Ajellomyc... 149 6e-37 sp|Q94A52|RH2_ARATH Eukaryotic initiation factor 4A-III homolog O... 146 7e-37 sp|Q8LA13|RH11_ARATH DEAD-box ATP-dependent RNA helicase 11 OS=Ar... 150 8e-37 sp|O02494|IF4A_CRYPV Eukaryotic initiation factor 4A OS=Cryptospo... 146 8e-37 sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35 OS=Ar... 149 8e-37 sp|A1DG51|DBP3_NEOFI ATP-dependent RNA helicase dbp3 OS=Neosartor... 148 8e-37 sp|Q9VHP0|DDX3_DROME ATP-dependent RNA helicase bel OS=Drosophila... 151 9e-37 sp|Q5Z6G5|RH35B_ORYSJ DEAD-box ATP-dependent RNA helicase 35B OS=... 150 9e-37 sp|B4F1V3|RHLB_PROMH ATP-dependent RNA helicase RhlB OS=Proteus m... 146 1e-36 sp|Q9LUW6|RH9_ARATH DEAD-box ATP-dependent RNA helicase 9, mitoch... 149 1e-36 sp|Q4WH83|DBP3_ASPFU ATP-dependent RNA helicase dbp3 OS=Aspergill... 147 1e-36 sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida g... 148 2e-36 sp|Q1DTB3|FAL1_COCIM ATP-dependent RNA helicase FAL1 OS=Coccidioi... 145 2e-36 sp|P42305|DBPA_BACSU ATP-dependent RNA helicase DbpA OS=Bacillus ... 146 2e-36 sp|Q75HJ0|RH37_ORYSJ DEAD-box ATP-dependent RNA helicase 37 OS=Or... 149 2e-36 sp|Q6CX73|FAL1_KLULA ATP-dependent RNA helicase FAL1 OS=Kluyverom... 144 2e-36 sp|P33906|DEAD_KLEPN ATP-dependent RNA helicase DeaD OS=Klebsiell... 149 3e-36 sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=... 149 3e-36 sp|Q4P184|FAL1_USTMA ATP-dependent RNA helicase FAL1 OS=Ustilago ... 144 3e-36 sp|Q5VQL1|RH14_ORYSJ DEAD-box ATP-dependent RNA helicase 14 OS=Or... 149 3e-36 sp|Q2GWJ5|FAL1_CHAGB ATP-dependent RNA helicase FAL1 OS=Chaetomiu... 144 3e-36 sp|Q0CL13|DBP3_ASPTN ATP-dependent RNA helicase dbp3 OS=Aspergill... 146 3e-36 sp|Q8Y7M8|DBPA_LISMO ATP-dependent RNA helicase DbpA OS=Listeria ... 145 3e-36 sp|Q9P735|FAL1_NEUCR ATP-dependent RNA helicase fal-1 OS=Neurospo... 144 3e-36 sp|A5DWJ1|FAL1_LODEL ATP-dependent RNA helicase FAL1 OS=Lodderomy... 144 4e-36 sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Arab... 146 5e-36 sp|Q9LYJ9|RH46_ARATH DEAD-box ATP-dependent RNA helicase 46 OS=Ar... 148 5e-36 sp|Q5A4E2|DED1_CANAL ATP-dependent RNA helicase DED1 OS=Candida a... 148 5e-36 sp|Q4IF76|DBP2_GIBZE ATP-dependent RNA helicase DBP2 OS=Gibberell... 147 6e-36 sp|A4QU31|FAL1_PYRO7 ATP-dependent RNA helicase FAL1 OS=Pyricular... 143 7e-36 sp|A5DE68|FAL1_PICGU ATP-dependent RNA helicase FAL1 OS=Meyerozym... 143 7e-36 sp|A6ZWD3|DBP1_YEAS7 ATP-dependent RNA helicase DBP1 OS=Saccharom... 147 7e-36 sp|P24784|DBP1_YEAST ATP-dependent RNA helicase DBP1 OS=Saccharom... 147 8e-36 sp|A5E1W4|DBP3_LODEL ATP-dependent RNA helicase DBP3 OS=Lodderomy... 145 9e-36 sp|A6QXC1|DBP3_AJECN ATP-dependent RNA helicase DBP3 OS=Ajellomyc... 145 1e-35 sp|Q4IAA0|FAL1_GIBZE ATP-dependent RNA helicase FAL1 OS=Gibberell... 143 1e-35 sp|Q755A5|DBP3_EREGS ATP-dependent RNA helicase DBP3 OS=Eremothec... 145 1e-35 sp|P57453|DEAD_BUCAI ATP-dependent RNA helicase DeaD OS=Buchnera ... 146 1e-35 sp|A3GFV3|FAL1_PICST ATP-dependent RNA helicase FAL1 OS=Scheffers... 142 1e-35 sp|A5DQS0|DED1_PICGU ATP-dependent RNA helicase DED1 OS=Meyerozym... 147 1e-35 sp|Q7SBC6|DBP2_NEUCR ATP-dependent RNA helicase dbp2 OS=Neurospor... 145 1e-35 sp|Q8XA87|DEAD_ECO57 ATP-dependent RNA helicase DeaD OS=Escherich... 146 1e-35 sp|Q9SQV1|RH40_ARATH DEAD-box ATP-dependent RNA helicase 40 OS=Ar... 148 1e-35 sp|G0SFM2|DBP2_CHATD ATP-dependent RNA helicase DBP2 OS=Chaetomiu... 145 1e-35 sp|Q8K9H6|DEAD_BUCAP ATP-dependent RNA helicase DeaD OS=Buchnera ... 146 1e-35 sp|Q8Y8N0|CSHA_LISMO ATP-dependent RNA helicase CshA OS=Listeria ... 145 2e-35 sp|P41380|IF4A3_NICPL Eukaryotic initiation factor 4A-3 OS=Nicoti... 142 2e-35 sp|Q4IJH1|DBP3_GIBZE ATP-dependent RNA helicase DBP3 OS=Gibberell... 145 2e-35 sp|P0A9P8|DEAD_SHIFL ATP-dependent RNA helicase DeaD OS=Shigella ... 146 2e-35 sp|P0A9P6|DEAD_ECOLI ATP-dependent RNA helicase DeaD OS=Escherich... 146 2e-35 sp|P0A9P7|DEAD_ECOL6 ATP-dependent RNA helicase DeaD OS=Escherich... 146 2e-35 sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Or... 148 2e-35 sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharom... 145 2e-35 sp|A7E449|DBP2_SCLS1 ATP-dependent RNA helicase dbp2 OS=Sclerotin... 145 2e-35 sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharom... 145 2e-35 sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helica... 148 2e-35 sp|Q2HBE7|DED1_CHAGB ATP-dependent RNA helicase DED1 OS=Chaetomiu... 146 2e-35 sp|Q87KH5|RHLB_VIBPA ATP-dependent RNA helicase RhlB OS=Vibrio pa... 142 2e-35 sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioi... 144 2e-35 sp|A4QSS5|DBP2_PYRO7 ATP-dependent RNA helicase DBP2 OS=Pyricular... 144 3e-35 sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=... 145 3e-35 sp|Q75B50|DED1_EREGS ATP-dependent RNA helicase DED1 OS=Eremothec... 145 3e-35 sp|Q8Y755|CSHB_LISMO DEAD-box ATP-dependent RNA helicase CshB OS=... 142 3e-35 sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartor... 144 4e-35 sp|A6SFW7|DBP2_BOTFB ATP-dependent RNA helicase dbp2 OS=Botryotin... 144 4e-35 sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia ... 144 6e-35 sp|Q2UMH8|DBP3_ASPOR ATP-dependent RNA helicase dbp3 OS=Aspergill... 142 6e-35 sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida g... 144 6e-35 sp|Q5B0J9|DBP2_EMENI ATP-dependent RNA helicase dbp2 OS=Emericell... 144 6e-35 sp|Q6BU54|DED1_DEBHA ATP-dependent RNA helicase DED1 OS=Debaryomy... 144 7e-35 sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Aspergill... 143 7e-35 sp|Q5AWA6|DBP3_EMENI ATP-dependent RNA helicase dbp3 OS=Emericell... 142 7e-35 sp|Q6C9P3|DBP3_YARLI ATP-dependent RNA helicase DBP3 OS=Yarrowia ... 143 8e-35 sp|Q4I7K4|DED1_GIBZE ATP-dependent RNA helicase DED1 OS=Gibberell... 144 9e-35 sp|Q8H136|RH14_ARATH DEAD-box ATP-dependent RNA helicase 14 OS=Ar... 144 1e-34 sp|Q0UWA6|DED1_PHANO ATP-dependent RNA helicase DED1 OS=Phaeospha... 144 1e-34 sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helica... 145 1e-34 sp|Q10055|FAL1_SCHPO ATP-dependent RNA helicase fal1 OS=Schizosac... 140 1e-34 sp|B2VG58|RHLB_ERWT9 ATP-dependent RNA helicase RhlB OS=Erwinia t... 140 1e-34 sp|Q10202|DBP3_SCHPO ATP-dependent RNA helicase dbp3 OS=Schizosac... 143 1e-34 sp|Q6CZD9|RHLB_PECAS ATP-dependent RNA helicase RhlB OS=Pectobact... 140 1e-34 sp|Q9C8J1|RH34_ARATH DEAD-box ATP-dependent RNA helicase 34 OS=Ar... 139 1e-34 sp|A6QSQ0|FAL1_AJECN ATP-dependent RNA helicase FAL1 OS=Ajellomyc... 140 1e-34 sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffers... 143 1e-34 sp|A2QC74|DBP2_ASPNC ATP-dependent RNA helicase dbp2 OS=Aspergill... 142 1e-34 sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Ar... 145 2e-34 sp|Q9P6U9|DED1_NEUCR ATP-dependent RNA helicase ded1 OS=Neurospor... 144 2e-34 sp|Q0UY62|DBP3_PHANO ATP-dependent RNA helicase DBP3 OS=Phaeospha... 142 2e-34 sp|Q4WEB4|FAL1_ASPFU ATP-dependent RNA helicase fal1 OS=Aspergill... 139 2e-34 sp|Q2UAK1|FAL1_ASPOR ATP-dependent RNA helicase fal1 OS=Aspergill... 139 2e-34 sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizos... 144 2e-34 sp|Q6C347|FAL1_YARLI ATP-dependent RNA helicase FAL1 OS=Yarrowia ... 139 2e-34 sp|A7EM88|FAL1_SCLS1 ATP-dependent RNA helicase fal1 OS=Sclerotin... 139 2e-34 sp|Q6BZ77|DBP3_DEBHA ATP-dependent RNA helicase DBP3 OS=Debaryomy... 141 2e-34 sp|Q9HXE5|RHLB_PSEAE ATP-dependent RNA helicase RhlB OS=Pseudomon... 139 2e-34 sp|Q02S21|RHLB_PSEAB ATP-dependent RNA helicase RhlB OS=Pseudomon... 139 2e-34 sp|B7UUT0|RHLB_PSEA8 ATP-dependent RNA helicase RhlB OS=Pseudomon... 139 2e-34 sp|A7MQI2|RHLB_CROS8 ATP-dependent RNA helicase RhlB OS=Cronobact... 139 2e-34 sp|A6TGG9|RHLB_KLEP7 ATP-dependent RNA helicase RhlB OS=Klebsiell... 139 3e-34 sp|A6VKC3|RHLB_ACTSZ ATP-dependent RNA helicase RhlB OS=Actinobac... 139 3e-34 sp|A1D071|FAL1_NEOFI ATP-dependent RNA helicase fal1 OS=Neosartor... 139 3e-34 sp|Q5AUL4|FAL1_EMENI ATP-dependent RNA helicase fal1 OS=Emericell... 139 3e-34 sp|C6DHF5|RHLB_PECCP ATP-dependent RNA helicase RhlB OS=Pectobact... 139 3e-34 sp|Q2U070|DBP2_ASPOR ATP-dependent RNA helicase dbp2 OS=Aspergill... 141 3e-34 sp|A1C6C4|DBP2_ASPCL ATP-dependent RNA helicase dbp2 OS=Aspergill... 141 3e-34 sp|Q10I26|IF43B_ORYSJ Eukaryotic initiation factor 4A-III homolog... 139 3e-34 sp|A6S4N4|FAL1_BOTFB ATP-dependent RNA helicase fal1 OS=Botryotin... 138 3e-34 sp|Q0CAS8|FAL1_ASPTN ATP-dependent RNA helicase fal1 OS=Aspergill... 138 3e-34 sp|A1C595|FAL1_ASPCL ATP-dependent RNA helicase fal1 OS=Aspergill... 138 3e-34 sp|A5AAE5|FAL1_ASPNC ATP-dependent RNA helicase fal1 OS=Aspergill... 138 3e-34 sp|P96614|CSHA_BACSU DEAD-box ATP-dependent RNA helicase CshA OS=... 140 4e-34 sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwal... 142 4e-34 sp|A4RHF1|DED1_PYRO7 ATP-dependent RNA helicase DED1 OS=Pyricular... 142 4e-34 sp|Q1DJF0|DED1_COCIM ATP-dependent RNA helicase DED1 OS=Coccidioi... 142 4e-34 sp|Q5L3G9|CSHA_GEOKA DEAD-box ATP-dependent RNA helicase CshA OS=... 139 4e-34 sp|Q62167|DDX3X_MOUSE ATP-dependent RNA helicase DDX3X OS=Mus mus... 142 5e-34 sp|Q88NB7|RHLB_PSEPK ATP-dependent RNA helicase RhlB OS=Pseudomon... 138 5e-34 sp|Q9CAI7|IF4A3_ARATH Eukaryotic initiation factor 4A-3 OS=Arabid... 138 6e-34 sp|B7VME9|RHLB_VIBA3 ATP-dependent RNA helicase RhlB OS=Vibrio at... 139 6e-34 sp|B5XYY9|RHLB_KLEP3 ATP-dependent RNA helicase RhlB OS=Klebsiell... 138 6e-34 sp|B1KQF6|RHLB_SHEWM ATP-dependent RNA helicase RhlB OS=Shewanell... 139 6e-34 sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomy... 142 7e-34 sp|A7EJY3|DED1_SCLS1 ATP-dependent RNA helicase ded1 OS=Sclerotin... 142 7e-34 sp|A6R3L3|DED1_AJECN ATP-dependent RNA helicase DED1 OS=Ajellomyc... 142 7e-34 sp|A7MXT4|RHLB_VIBC1 ATP-dependent RNA helicase RhlB OS=Vibrio ca... 138 7e-34 sp|A4WG30|RHLB_ENT38 ATP-dependent RNA helicase RhlB OS=Enterobac... 138 7e-34 sp|C4K8M8|RHLB_HAMD5 ATP-dependent RNA helicase RhlB OS=Hamiltone... 138 7e-34 sp|Q9NXZ2|DDX43_HUMAN Probable ATP-dependent RNA helicase DDX43 O... 141 8e-34 sp|Q6CLR3|DED1_KLULA ATP-dependent RNA helicase DED1 OS=Kluyverom... 141 8e-34 sp|B5BIS9|RHLB_SALPK ATP-dependent RNA helicase RhlB OS=Salmonell... 137 9e-34 sp|Q91372|DDX4_XENLA Probable ATP-dependent RNA helicase DDX4 OS=... 141 9e-34 sp|Q40467|IF414_TOBAC Eukaryotic initiation factor 4A-14 OS=Nicot... 137 1e-33 sp|C8V8H4|DED1_EMENI ATP-dependent RNA helicase ded1 OS=Emericell... 141 1e-33 sp|Q5VNM3|IF43A_ORYSJ Eukaryotic initiation factor 4A-III homolog... 137 1e-33 sp|A9MJ29|RHLB_SALAR ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|P0A2P0|RHLB_SALTY ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|P0A2P1|RHLB_SALTI ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|B4TNT3|RHLB_SALSV ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|C0Q2V9|RHLB_SALPC ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|A9MXF3|RHLB_SALPB ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|B4SZ26|RHLB_SALNS ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|B4TB13|RHLB_SALHS ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|B5RFS3|RHLB_SALG2 ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|B5QVH2|RHLB_SALEP ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|Q57HT6|RHLB_SALCH ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|B5EZ40|RHLB_SALA4 ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|A6SEH9|DED1_BOTFB ATP-dependent RNA helicase ded1 OS=Botryotin... 141 1e-33 sp|Q088J2|RHLB_SHEFN ATP-dependent RNA helicase RhlB OS=Shewanell... 137 1e-33 sp|Q6FS54|DBP3_CANGA ATP-dependent RNA helicase DBP3 OS=Candida g... 139 1e-33 sp|Q62095|DDX3Y_MOUSE ATP-dependent RNA helicase DDX3Y OS=Mus mus... 140 1e-33 sp|B1JQ11|RHLB_YERPY ATP-dependent RNA helicase RhlB OS=Yersinia ... 137 1e-33 sp|Q66G19|RHLB_YERPS ATP-dependent RNA helicase RhlB OS=Yersinia ... 137 1e-33 sp|A4TRC8|RHLB_YERPP ATP-dependent RNA helicase RhlB OS=Yersinia ... 137 1e-33 sp|Q1CNK3|RHLB_YERPN ATP-dependent RNA helicase RhlB OS=Yersinia ... 137 1e-33 sp|Q8ZAD8|RHLB_YERPE ATP-dependent RNA helicase RhlB OS=Yersinia ... 137 1e-33 sp|B2K046|RHLB_YERPB ATP-dependent RNA helicase RhlB OS=Yersinia ... 137 1e-33 sp|Q1CBQ4|RHLB_YERPA ATP-dependent RNA helicase RhlB OS=Yersinia ... 137 1e-33 sp|A7FD47|RHLB_YERP3 ATP-dependent RNA helicase RhlB OS=Yersinia ... 137 1e-33 sp|P0A4D8|CSHA_STRR6 DEAD-box ATP-dependent RNA helicase CshA OS=... 139 1e-33 sp|P0A4D7|CSHA_STRPN DEAD-box ATP-dependent RNA helicase CshA OS=... 139 1e-33 sp|B5FN74|RHLB_SALDC ATP-dependent RNA helicase RhlB OS=Salmonell... 137 1e-33 sp|P21693|DBPA_ECOLI ATP-dependent RNA helicase DbpA OS=Escherich... 138 2e-33 sp|P41378|IF4A_WHEAT Eukaryotic initiation factor 4A OS=Triticum ... 137 2e-33 sp|A8ACT3|RHLB_CITK8 ATP-dependent RNA helicase RhlB OS=Citrobact... 137 2e-33 sp|Q2H720|DBP2_CHAGB ATP-dependent RNA helicase DBP2 OS=Chaetomiu... 139 2e-33 sp|P24346|DDX3_XENLA Putative ATP-dependent RNA helicase an3 OS=X... 140 2e-33 sp|Q8DDN6|RHLB_VIBVU ATP-dependent RNA helicase RhlB OS=Vibrio vu... 137 2e-33 sp|Q7MGP7|RHLB_VIBVY ATP-dependent RNA helicase RhlB OS=Vibrio vu... 137 2e-33 sp|Q9ZRZ8|RH28_ARATH DEAD-box ATP-dependent RNA helicase 28 OS=Ar... 140 3e-33 sp|P16381|DDX3L_MOUSE Putative ATP-dependent RNA helicase Pl10 OS... 140 3e-33 sp|Q887N8|RHLB_PSESM ATP-dependent RNA helicase RhlB OS=Pseudomon... 135 3e-33 sp|O25029|RHPA_HELPY DEAD-box ATP-dependent RNA helicase RhpA OS=... 137 3e-33 sp|B7NTG2|RHLB_ECO7I ATP-dependent RNA helicase RhlB OS=Escherich... 136 3e-33 sp|A7TEF4|FAL1_VANPO ATP-dependent RNA helicase FAL1 OS=Vanderwal... 135 3e-33 sp|Q65N62|CSHA_BACLD DEAD-box ATP-dependent RNA helicase CshA OS=... 137 3e-33 sp|Q329V8|RHLB_SHIDS ATP-dependent RNA helicase RhlB OS=Shigella ... 136 3e-33 sp|B7LU75|RHLB_ESCF3 ATP-dependent RNA helicase RhlB OS=Escherich... 136 3e-33 sp|Q12S35|RHLB_SHEDO ATP-dependent RNA helicase RhlB OS=Shewanell... 136 3e-33 sp|Q8CRP6|CSHA_STAES DEAD-box ATP-dependent RNA helicase CshA OS=... 137 3e-33 sp|P20447|DBP3_YEAST ATP-dependent RNA helicase DBP3 OS=Saccharom... 138 4e-33 sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10 OS=Nicot... 135 4e-33 sp|B1LLV3|RHLB_ECOSM ATP-dependent RNA helicase RhlB OS=Escherich... 136 4e-33 sp|B7NF85|RHLB_ECOLU ATP-dependent RNA helicase RhlB OS=Escherich... 136 4e-33 sp|Q1DZK8|DBP3_COCIM ATP-dependent RNA helicase DBP3 OS=Coccidioi... 137 4e-33 sp|Q0SYX0|RHLB_SHIF8 ATP-dependent RNA helicase RhlB OS=Shigella ... 136 4e-33 sp|B5YY28|RHLB_ECO5E ATP-dependent RNA helicase RhlB OS=Escherich... 136 4e-33 sp|Q7MYL2|RHLB_PHOLL ATP-dependent RNA helicase RhlB OS=Photorhab... 136 4e-33 sp|P35683|IF4A1_ORYSJ Eukaryotic initiation factor 4A-1 OS=Oryza ... 135 4e-33 sp|Q41741|IF4A_MAIZE Eukaryotic initiation factor 4A OS=Zea mays ... 135 4e-33 sp|P41381|IF4A8_TOBAC Eukaryotic initiation factor 4A-8 OS=Nicoti... 135 4e-33 sp|Q3YVI4|RHLB_SHISS ATP-dependent RNA helicase RhlB OS=Shigella ... 135 4e-33 sp|P0A8K0|RHLB_SHIFL ATP-dependent RNA helicase RhlB OS=Shigella ... 135 4e-33 sp|Q31UK5|RHLB_SHIBS ATP-dependent RNA helicase RhlB OS=Shigella ... 135 4e-33 sp|B2TU12|RHLB_SHIB3 ATP-dependent RNA helicase RhlB OS=Shigella ... 135 4e-33 sp|Q1R4F9|RHLB_ECOUT ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|B6I4B6|RHLB_ECOSE ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|P0A8J8|RHLB_ECOLI ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|B1IWC0|RHLB_ECOLC ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|P0A8J9|RHLB_ECOL6 ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|Q0TAU3|RHLB_ECOL5 ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|A1AHV0|RHLB_ECOK1 ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|A8A6N4|RHLB_ECOHS ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|B1X9Z4|RHLB_ECODH ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|C4ZZ48|RHLB_ECOBW ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|B7M5C7|RHLB_ECO8A ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|B7MR01|RHLB_ECO81 ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|B7L8B6|RHLB_ECO55 ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|B7MGJ1|RHLB_ECO45 ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|B7UMN5|RHLB_ECO27 ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|A7ZTY2|RHLB_ECO24 ATP-dependent RNA helicase RhlB OS=Escherich... 135 4e-33 sp|Q5RF43|DDX3Y_PONAB ATP-dependent RNA helicase DDX3Y OS=Pongo a... 139 4e-33 sp|A6ZUA1|DBP3_YEAS7 ATP-dependent RNA helicase DBP3 OS=Saccharom... 137 4e-33 sp|O00571|DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sa... 139 4e-33 sp|Q8XAT4|RHLB_ECO57 ATP-dependent RNA helicase RhlB OS=Escherich... 135 5e-33 sp|P0CQ79|DBP3_CRYNB ATP-dependent RNA helicase DBP3 OS=Cryptococ... 138 5e-33 sp|O15523|DDX3Y_HUMAN ATP-dependent RNA helicase DDX3Y OS=Homo sa... 139 5e-33 sp|P0CQ78|DBP3_CRYNJ ATP-dependent RNA helicase DBP3 OS=Cryptococ... 138 5e-33 sp|B9XXL6|RHPA_HELP8 DEAD-box ATP-dependent RNA helicase RhpA OS=... 137 5e-33 sp|Q0CXD0|IF4A_ASPTN ATP-dependent RNA helicase eIF4A OS=Aspergil... 135 5e-33 sp|Q6GVM6|DDX3Y_PANTR ATP-dependent RNA helicase DDX3Y OS=Pan tro... 139 5e-33 sp|Q54QS3|DDX3_DICDI Probable ATP-dependent RNA helicase ddx3 OS=... 139 6e-33 sp|A3Q9R3|RHLB_SHELP ATP-dependent RNA helicase RhlB OS=Shewanell... 135 6e-33 sp|Q5B948|IF4A_EMENI ATP-dependent RNA helicase eIF4A OS=Emericel... 135 6e-33 sp|P46942|DB10_NICSY ATP-dependent RNA helicase-like protein DB10... 138 6e-33 sp|P0CQ72|FAL1_CRYNJ ATP-dependent RNA helicase FAL1 OS=Cryptococ... 134 6e-33 sp|P0CQ73|FAL1_CRYNB ATP-dependent RNA helicase FAL1 OS=Cryptococ... 134 6e-33 sp|Q54CE0|DDX17_DICDI Probable ATP-dependent RNA helicase ddx17 O... 139 7e-33 sp|A1SAL1|RHLB_SHEAM ATP-dependent RNA helicase RhlB OS=Shewanell... 135 7e-33 sp|B6EPA4|RHLB_ALISL ATP-dependent RNA helicase RhlB OS=Aliivibri... 135 7e-33 sp|Q49Z29|CSHA_STAS1 DEAD-box ATP-dependent RNA helicase CshA OS=... 137 7e-33 sp|P41376|IF4A1_ARATH Eukaryotic initiation factor 4A-1 OS=Arabid... 135 8e-33 sp|P41379|IF4A2_NICPL Eukaryotic initiation factor 4A-2 OS=Nicoti... 135 8e-33 sp|A1CH78|DED1_ASPCL ATP-dependent RNA helicase ded1 OS=Aspergill... 138 8e-33 sp|Q40470|IF4A7_TOBAC Eukaryotic initiation factor 4A-7 OS=Nicoti... 134 9e-33 sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosartor... 138 9e-33 sp|Q501J6|DDX17_MOUSE Probable ATP-dependent RNA helicase DDX17 O... 138 9e-33 sp|Q40465|IF411_TOBAC Eukaryotic initiation factor 4A-11 OS=Nicot... 134 9e-33 sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 O... 139 9e-33 sp|A7TJ36|DBP3_VANPO ATP-dependent RNA helicase DBP3 OS=Vanderwal... 136 1e-32 sp|Q9Z6C9|CSHA_LIMRT ATP-dependent RNA helicase CshA OS=Limosilac... 136 1e-32 sp|Q5HME0|CSHA_STAEQ DEAD-box ATP-dependent RNA helicase CshA OS=... 136 1e-32 sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergill... 138 1e-32 sp|Q2NQB2|RHLB_SODGM ATP-dependent RNA helicase RhlB OS=Sodalis g... 134 1e-32 sp|Q2UGK3|DED1_ASPOR ATP-dependent RNA helicase ded1 OS=Aspergill... 138 1e-32 sp|O13370|DED1_SCHPO ATP-dependent RNA helicase ded1 OS=Schizosac... 137 1e-32 sp|A3LRW2|DBP3_PICST ATP-dependent RNA helicase DBP3 OS=Scheffers... 136 1e-32 sp|Q5APT8|DBP3_CANAL ATP-dependent RNA helicase DBP3 OS=Candida a... 137 1e-32 sp|Q95YF3|CGH1_CAEEL ATP-dependent RNA helicase cgh-1 OS=Caenorha... 134 1e-32 sp|Q40468|IF415_TOBAC Eukaryotic initiation factor 4A-15 OS=Nicot... 134 1e-32 sp|A8G828|RHLB_SERP5 ATP-dependent RNA helicase RhlB OS=Serratia ... 134 1e-32 sp|Q54KG1|DDX41_DICDI Probable ATP-dependent RNA helicase ddx41 O... 137 1e-32 sp|Q4WP13|DED1_ASPFU ATP-dependent RNA helicase ded1 OS=Aspergill... 137 1e-32 sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 O... 138 2e-32 sp|Q8EJQ5|RHLB_SHEON ATP-dependent RNA helicase RhlB OS=Shewanell... 134 2e-32 sp|A5UI36|RHLB_HAEIG ATP-dependent RNA helicase RhlB OS=Haemophil... 134 2e-32 sp|Q6LLL5|RHLB_PHOPR ATP-dependent RNA helicase RhlB OS=Photobact... 134 2e-32 sp|A8GZJ0|RHLB_SHEPA ATP-dependent RNA helicase RhlB OS=Shewanell... 134 2e-32 sp|A1RFB3|RHLB_SHESW ATP-dependent RNA helicase RhlB OS=Shewanell... 134 2e-32 sp|A4YB09|RHLB_SHEPC ATP-dependent RNA helicase RhlB OS=Shewanell... 134 2e-32 sp|A8G0U0|RHLB_SHESH ATP-dependent RNA helicase RhlB OS=Shewanell... 134 2e-32 sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosac... 135 3e-32 sp|Q4PHU9|DBP2_USTMA ATP-dependent RNA helicase DBP2 OS=Ustilago ... 135 3e-32 sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptoc... 135 3e-32 sp|P0CQ77|DBP2_CRYNB ATP-dependent RNA helicase DBP2-A OS=Cryptoc... 135 3e-32 sp|Q02748|IF4A_DROME Eukaryotic initiation factor 4A OS=Drosophil... 132 3e-32 sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helica... 138 3e-32 sp|Q9BQ39|DDX50_HUMAN ATP-dependent RNA helicase DDX50 OS=Homo sa... 137 4e-32 sp|C3LQR1|RHLB_VIBCM ATP-dependent RNA helicase RhlB OS=Vibrio ch... 133 4e-32 sp|Q9KV52|RHLB_VIBCH ATP-dependent RNA helicase RhlB OS=Vibrio ch... 133 4e-32 sp|A5F3R4|RHLB_VIBC3 ATP-dependent RNA helicase RhlB OS=Vibrio ch... 133 4e-32 sp|Q4L7W0|CSHA_STAHJ DEAD-box ATP-dependent RNA helicase CshA OS=... 134 4e-32 sp|P0CQ70|IF4A_CRYNJ ATP-dependent RNA helicase eIF4A OS=Cryptoco... 132 5e-32 sp|P0CQ71|IF4A_CRYNB ATP-dependent RNA helicase eIF4A OS=Cryptoco... 132 5e-32 sp|Q58083|H669_METJA Probable ATP-dependent RNA helicase MJ0669 O... 131 5e-32 sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5 OS=Oryz... 134 5e-32 sp|Q6Z2Z4|IF4A3_ORYSJ Eukaryotic initiation factor 4A-3 OS=Oryza ... 132 5e-32 sp|P17844|DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 OS=... 135 5e-32 sp|Q7A0D2|CSHA_STAAW DEAD-box ATP-dependent RNA helicase CshA OS=... 134 5e-32 sp|Q6G7M9|CSHA_STAAS DEAD-box ATP-dependent RNA helicase CshA OS=... 134 5e-32 sp|Q7A4G0|CSHA_STAAN DEAD-box ATP-dependent RNA helicase CshA OS=... 134 5e-32 sp|Q99SH6|CSHA_STAAM DEAD-box ATP-dependent RNA helicase CshA OS=... 134 5e-32 sp|Q5HEB9|CSHA_STAAC DEAD-box ATP-dependent RNA helicase CshA OS=... 134 5e-32 sp|Q2FWH5|CSHA_STAA8 DEAD-box ATP-dependent RNA helicase CshA OS=... 134 5e-32 sp|Q2FF45|CSHA_STAA3 DEAD-box ATP-dependent RNA helicase CshA OS=... 134 5e-32 sp|Q6GEZ3|CSHA_STAAR DEAD-box ATP-dependent RNA helicase CshA OS=... 134 5e-32 sp|Q40471|IF4A9_TOBAC Eukaryotic initiation factor 4A-9 OS=Nicoti... 132 5e-32 sp|Q25225|IF4A_LEIBR Probable eukaryotic initiation factor 4A OS=... 132 5e-32 sp|Q61656|DDX5_MOUSE Probable ATP-dependent RNA helicase DDX5 OS=... 135 6e-32 sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5 OS=... 135 6e-32 sp|Q6CT46|DBP3_KLULA ATP-dependent RNA helicase DBP3 OS=Kluyverom... 134 7e-32 sp|Q2YUH3|CSHA_STAAB DEAD-box ATP-dependent RNA helicase CshA OS=... 134 7e-32 sp|Q4R6M5|DDX5_MACFA Probable ATP-dependent RNA helicase DDX5 OS=... 135 7e-32 sp|Q99MJ9|DDX50_MOUSE ATP-dependent RNA helicase DDX50 OS=Mus mus... 136 7e-32 sp|B0TJ29|RHLB_SHEHH ATP-dependent RNA helicase RhlB OS=Shewanell... 132 8e-32 sp|Q81IT9|CSHA_BACCR DEAD-box ATP-dependent RNA helicase CshA OS=... 134 9e-32 sp|Q0CLJ6|DED1_ASPTN ATP-dependent RNA helicase ded1 OS=Aspergill... 135 9e-32 sp|Q73EU1|CSHA_BACC1 DEAD-box ATP-dependent RNA helicase CshA OS=... 134 9e-32 sp|Q6FP38|DBP1_CANGA ATP-dependent RNA helicase DBP1 OS=Candida g... 134 1e-31 sp|Q2GUI4|DBP3_CHAGB ATP-dependent RNA helicase DBP3 OS=Chaetomiu... 134 1e-31 sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 O... 135 1e-31 sp|Q9V3C0|DDX41_DROME ATP-dependent RNA helicase abstrakt OS=Dros... 134 1e-31 sp|Q755W0|FAL1_EREGS ATP-dependent RNA helicase FAL1 OS=Eremothec... 131 1e-31 sp|Q63GX5|CSHA_BACCZ DEAD-box ATP-dependent RNA helicase CshA OS=... 133 1e-31 sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 O... 134 1e-31 sp|B8CHZ1|RHLB_SHEPW ATP-dependent RNA helicase RhlB OS=Shewanell... 132 1e-31 sp|Q6FJG1|FAL1_CANGA ATP-dependent RNA helicase FAL1 OS=Candida g... 131 1e-31 sp|Q6HPE6|CSHA_BACHK DEAD-box ATP-dependent RNA helicase CshA OS=... 133 1e-31 sp|Q81VG0|CSHA_BACAN DEAD-box ATP-dependent RNA helicase CshA OS=... 133 1e-31 sp|A0R8U6|CSHA_BACAH DEAD-box ATP-dependent RNA helicase CshA OS=... 133 1e-31 sp|A3D9I5|RHLB_SHEB5 ATP-dependent RNA helicase RhlB OS=Shewanell... 132 1e-31 sp|B8E670|RHLB_SHEB2 ATP-dependent RNA helicase RhlB OS=Shewanell... 132 1e-31 sp|A9L5D5|RHLB_SHEB9 ATP-dependent RNA helicase RhlB OS=Shewanell... 132 1e-31 sp|A6WTD3|RHLB_SHEB8 ATP-dependent RNA helicase RhlB OS=Shewanell... 132 1e-31 sp|A1CJT5|IF4A_ASPCL ATP-dependent RNA helicase eIF4A OS=Aspergil... 130 2e-31 sp|O62591|IF4A_LEIMA Probable eukaryotic initiation factor 4A OS=... 130 2e-31 sp|A4HRK0|IF4A_LEIIN Probable eukaryotic initiation factor 4A OS=... 130 2e-31 sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Or... 135 2e-31 sp|A0KS84|RHLB_SHESA ATP-dependent RNA helicase RhlB OS=Shewanell... 131 2e-31 sp|P19109|DDX17_DROME ATP-dependent RNA helicase p62 OS=Drosophil... 134 2e-31 sp|A1CX72|PRP28_NEOFI Pre-mRNA-splicing ATP-dependent RNA helicas... 135 2e-31 sp|P09052|VASA1_DROME ATP-dependent RNA helicase vasa OS=Drosophi... 134 2e-31 sp|B5FF87|RHLB_ALIFM ATP-dependent RNA helicase RhlB OS=Aliivibri... 131 2e-31 sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Ar... 132 2e-31 sp|Q0UAT0|FAL1_PHANO ATP-dependent RNA helicase FAL1 OS=Phaeospha... 129 2e-31 sp|Q3MSQ8|DDX4_PELLE Probable ATP-dependent RNA helicase DDX4 OS=... 134 2e-31 sp|Q5E8U5|RHLB_ALIF1 ATP-dependent RNA helicase RhlB OS=Aliivibri... 130 3e-31 sp|Q0HQL1|RHLB_SHESR ATP-dependent RNA helicase RhlB OS=Shewanell... 131 3e-31 sp|Q0HN76|RHLB_SHESM ATP-dependent RNA helicase RhlB OS=Shewanell... 131 3e-31 sp|Q4WPE9|PRP28_ASPFU Pre-mRNA-splicing ATP-dependent RNA helicas... 134 3e-31 sp|Q9CJS1|RHLB_PASMU ATP-dependent RNA helicase RhlB OS=Pasteurel... 130 3e-31 sp|Q5QYF8|RHLB_IDILO ATP-dependent RNA helicase RhlB OS=Idiomarin... 130 3e-31 sp|Q1DMX8|PRP28_COCIM Pre-mRNA-splicing ATP-dependent RNA helicas... 134 3e-31 sp|Q2HFP1|IF4A_CHAGB ATP-dependent RNA helicase eIF4A OS=Chaetomi... 129 3e-31 sp|Q0UU86|IF4A_PHANO ATP-dependent RNA helicase eIF4A OS=Phaeosph... 129 4e-31 sp|Q5BCU6|PRP28_EMENI Pre-mRNA-splicing ATP-dependent RNA helicas... 134 4e-31 sp|A5A6J2|DDX5_PANTR Probable ATP-dependent RNA helicase DDX5 OS=... 132 5e-31 sp|P41377|IF4A2_ARATH Eukaryotic initiation factor 4A-2 OS=Arabid... 129 5e-31 sp|Q1DHB2|PRP5_COCIM Pre-mRNA-processing ATP-dependent RNA helica... 134 5e-31 sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago ... 132 6e-31 sp|Q2UH00|PRP28_ASPOR Pre-mRNA-splicing ATP-dependent RNA helicas... 133 6e-31 sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Or... 130 6e-31 sp|A5DAC8|DBP3_PICGU ATP-dependent RNA helicase DBP3 OS=Meyerozym... 131 6e-31 sp|P38919|IF4A3_HUMAN Eukaryotic initiation factor 4A-III OS=Homo... 129 7e-31 sp|P0CQ80|DHH1_CRYNJ ATP-dependent RNA helicase DHH1 OS=Cryptococ... 132 7e-31 sp|P0CQ81|DHH1_CRYNB ATP-dependent RNA helicase DHH1 OS=Cryptococ... 132 7e-31 sp|Q4R3Q1|IF4A3_MACFA Eukaryotic initiation factor 4A-III OS=Maca... 129 7e-31 sp|Q58Z64|DHH1_CRYNH ATP-dependent RNA helicase VAD1 OS=Cryptococ... 132 7e-31 sp|Q3B8Q2|IF4A3_RAT Eukaryotic initiation factor 4A-III OS=Rattus... 129 7e-31 sp|A6M931|IF4A3_PIG Eukaryotic initiation factor 4A-III OS=Sus sc... 129 7e-31 sp|Q2NL22|IF4A3_BOVIN Eukaryotic initiation factor 4A-III OS=Bos ... 129 7e-31 sp|Q91VC3|IF4A3_MOUSE Eukaryotic initiation factor 4A-III OS=Mus ... 129 8e-31 sp|Q89AF9|DEAD_BUCBP ATP-dependent RNA helicase DeaD OS=Buchnera ... 132 8e-31 sp|Q7RV88|IF4A_NEUCR ATP-dependent RNA helicase eIF4A OS=Neurospo... 128 8e-31 sp|A7EGL7|IF4A_SCLS1 ATP-dependent RNA helicase eIF4A OS=Scleroti... 128 9e-31 sp|A2QEN5|IF4A_ASPNC ATP-dependent RNA helicase eIF4A OS=Aspergil... 128 1e-30 sp|Q6CDV4|IF4A_YARLI ATP-dependent RNA helicase eIF4A OS=Yarrowia... 128 1e-30 sp|A5UDI1|RHLB_HAEIE ATP-dependent RNA helicase RhlB OS=Haemophil... 129 1e-30 sp|A1SZG4|RHLB_PSYIN ATP-dependent RNA helicase RhlB OS=Psychromo... 128 1e-30 sp|B5FZY7|IF4A3_TAEGU Eukaryotic initiation factor 4A-III OS=Taen... 128 1e-30 sp|A4RK80|PRP28_PYRO7 Pre-mRNA-splicing ATP-dependent RNA helicas... 131 1e-30 sp|Q5ZM36|IF4A3_CHICK Eukaryotic initiation factor 4A-III OS=Gall... 128 1e-30 sp|A1D373|PRP5_NEOFI Pre-mRNA-processing ATP-dependent RNA helica... 132 1e-30 sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54 OS=Dictyos... 132 2e-30 sp|Q4WT99|PRP5_ASPFU Pre-mRNA-processing ATP-dependent RNA helica... 132 2e-30 sp|A3LQW7|DBP2_PICST ATP-dependent RNA helicase DBP2 OS=Scheffers... 130 2e-30 sp|A6RJ45|IF4A_BOTFB ATP-dependent RNA helicase eIF4A OS=Botryoti... 127 2e-30 sp|Q6CCZ1|PRP5_YARLI Pre-mRNA-processing ATP-dependent RNA helica... 132 3e-30 sp|Q0D1K3|PRP5_ASPTN Pre-mRNA-processing ATP-dependent RNA helica... 132 3e-30 sp|A1CHL3|PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helicas... 131 3e-30 sp|Q2U2J6|PRP5_ASPOR Pre-mRNA-processing ATP-dependent RNA helica... 131 3e-30 sp|A4QVP2|IF4A_PYRO7 ATP-dependent RNA helicase eIF4A OS=Pyricula... 127 3e-30 sp|P34580|DDX47_CAEEL Putative ATP-dependent RNA helicase T26G10.... 128 4e-30 sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helic... 131 4e-30 sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helica... 131 4e-30 sp|A4RN46|PRP5_PYRO7 Pre-mRNA-processing ATP-dependent RNA helica... 131 4e-30 sp|Q0E2Z7|RH41_ORYSJ DEAD-box ATP-dependent RNA helicase 41 OS=Or... 129 4e-30 sp|Q6C024|PRP28_YARLI Pre-mRNA-splicing ATP-dependent RNA helicas... 129 4e-30 sp|A7TGU7|DHH1_VANPO ATP-dependent RNA helicase DHH1 OS=Vanderwal... 128 4e-30 sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helica... 131 4e-30 sp|A6R3R5|IF4A_AJECN ATP-dependent RNA helicase eIF4A OS=Ajellomy... 126 4e-30 sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helica... 131 5e-30 sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helica... 131 5e-30 sp|Q0CLX0|PRP28_ASPTN Pre-mRNA-splicing ATP-dependent RNA helicas... 130 5e-30 sp|P0CQ88|PRP28_CRYNJ Pre-mRNA-splicing ATP-dependent RNA helicas... 130 5e-30 sp|P0CQ89|PRP28_CRYNB Pre-mRNA-splicing ATP-dependent RNA helicas... 130 5e-30 sp|A1D7N3|IF4A_NEOFI ATP-dependent RNA helicase eIF4A OS=Neosarto... 126 5e-30 sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 OS=Spin... 130 5e-30 sp|Q1DQ20|IF4A_COCIM ATP-dependent RNA helicase eIF4A OS=Coccidio... 126 6e-30 sp|A5DS77|DBP2_LODEL ATP-dependent RNA helicase DBP2 OS=Lodderomy... 128 6e-30 sp|Q6CB69|DED1_YARLI ATP-dependent RNA helicase DED1 OS=Yarrowia ... 129 6e-30 sp|Q4WX43|IF4A_ASPFU ATP-dependent RNA helicase eIF4A OS=Aspergil... 126 6e-30 sp|Q6CT85|RRP3_KLULA ATP-dependent rRNA helicase RRP3 OS=Kluyvero... 127 6e-30 sp|Q7ZVA6|IF4A3_DANRE Eukaryotic initiation factor 4A-III OS=Dani... 126 7e-30 sp|Q9VHS8|IF4A3_DROME Eukaryotic initiation factor 4A-III OS=Dros... 125 7e-30 sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Oryz... 129 9e-30 sp|Q75BS4|DHH1_EREGS ATP-dependent RNA helicase DHH1 OS=Eremothec... 127 9e-30 sp|C4LB49|RHLB_TOLAT ATP-dependent RNA helicase RhlB OS=Tolumonas... 126 9e-30 sp|B7ZTW1|IF4A3_XENTR Eukaryotic initiation factor 4A-III OS=Xeno... 125 9e-30 sp|Q54Y81|DDX23_DICDI ATP-dependent RNA helicase ddx23 OS=Dictyos... 129 1e-29 sp|P39517|DHH1_YEAST ATP-dependent RNA helicase DHH1 OS=Saccharom... 127 1e-29 sp|A6ZXG9|DHH1_YEAS7 ATP-dependent RNA helicase DHH1 OS=Saccharom... 127 1e-29 sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Ar... 128 1e-29 sp|Q2UPY3|IF4A_ASPOR ATP-dependent RNA helicase eIF4A OS=Aspergil... 125 1e-29 sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Or... 129 1e-29 sp|Q7SEL0|PRP28_NEUCR Pre-mRNA-splicing ATP-dependent RNA helicas... 129 1e-29 sp|Q54IV3|DDX42_DICDI Probable ATP-dependent RNA helicase ddx42 O... 129 1e-29 sp|A7ENE0|PRP5_SCLS1 Pre-mRNA-processing ATP-dependent RNA helica... 130 1e-29 sp|Q6BRN4|IF4A_DEBHA ATP-dependent RNA helicase eIF4A OS=Debaryom... 125 1e-29 sp|B5DG42|IF4A3_SALSA Eukaryotic initiation factor 4A-III OS=Salm... 125 1e-29 sp|O42226|I4A3B_XENLA Eukaryotic initiation factor 4A-III-B OS=Xe... 125 1e-29 sp|A6RW79|PRP5_BOTFB Pre-mRNA-processing ATP-dependent RNA helica... 129 1e-29 sp|A5DB98|IF4A_PICGU ATP-dependent RNA helicase eIF4A OS=Meyerozy... 125 2e-29 sp|Q8SRB2|DBP2_ENCCU ATP-dependent RNA helicase DBP2 OS=Encephali... 126 2e-29 sp|Q26696|DDX17_TRYBB Putative DEAD-box RNA helicase HEL64 OS=Try... 127 2e-29 sp|Q2HEB0|PRP28_CHAGB Pre-mRNA-splicing ATP-dependent RNA helicas... 128 2e-29 sp|Q9WTM2|DDX6_CAVPO Probable ATP-dependent RNA helicase DDX6 (Fr... 126 2e-29 sp|A5DVM3|IF4A_LODEL ATP-dependent RNA helicase eIF4A OS=Lodderom... 124 2e-29 sp|O49289|RH29_ARATH Putative DEAD-box ATP-dependent RNA helicase... 128 2e-29 sp|A4R5B8|DBP10_PYRO7 ATP-dependent RNA helicase DBP10 OS=Pyricul... 128 2e-29 sp|Q64060|DDX4_RAT Probable ATP-dependent RNA helicase DDX4 OS=Ra... 128 2e-29 sp|Q0I1X0|RHLB_HISS1 ATP-dependent RNA helicase RhlB OS=Histophil... 124 3e-29 sp|P54475|CSHB_BACSU DEAD-box ATP-dependent RNA helicase CshB OS=... 125 3e-29 sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helica... 129 3e-29 sp|A4R715|DHH1_PYRO7 ATP-dependent RNA helicase DHH1 OS=Pyricular... 126 3e-29 sp|Q7Y183|RH10_ORYSJ DEAD-box ATP-dependent RNA helicase 10 OS=Or... 125 3e-29 sp|A2XKG2|RH10_ORYSI DEAD-box ATP-dependent RNA helicase 10 OS=Or... 125 3e-29 sp|A5DU73|PRP28_LODEL Pre-mRNA-splicing ATP-dependent RNA helicas... 127 3e-29 sp|P87206|IF4A_CANAL ATP-dependent RNA helicase eIF4A OS=Candida ... 124 4e-29 sp|A3GFI4|IF4A_PICST ATP-dependent RNA helicase eIF4A OS=Scheffer... 124 4e-29 sp|Q1E5R1|DHH1_COCIM ATP-dependent RNA helicase DHH1 OS=Coccidioi... 125 4e-29 sp|Q6FQU5|DHH1_CANGA ATP-dependent RNA helicase DHH1 OS=Candida g... 125 4e-29 sp|B0UUZ9|RHLB_HISS2 ATP-dependent RNA helicase RhlB OS=Histophil... 124 4e-29 sp|Q4JG17|VASAL_PENVA Probable ATP-dependent RNA helicase vasa-li... 127 4e-29 sp|A7TS37|RRP3_VANPO ATP-dependent rRNA helicase RRP3 OS=Vanderwa... 125 4e-29 sp|Q6GWX0|DDX4_PIG Probable ATP-dependent RNA helicase DDX4 OS=Su... 127 4e-29 sp|A2QIL2|PRP28_ASPNC Pre-mRNA-splicing ATP-dependent RNA helicas... 127 4e-29 sp|Q9M2E0|RH12_ARATH DEAD-box ATP-dependent RNA helicase 12 OS=Ar... 125 4e-29 sp|P54823|DDX6_MOUSE Probable ATP-dependent RNA helicase DDX6 OS=... 125 5e-29 sp|Q4HW67|DHH1_GIBZE ATP-dependent RNA helicase DHH1 OS=Gibberell... 125 5e-29 sp|A5DF03|PRP28_PICGU Pre-mRNA-splicing ATP-dependent RNA helicas... 126 5e-29 sp|Q38F76|IF4A_TRYB2 Probable eukaryotic initiation factor 4A OS=... 123 5e-29 sp|A7TGW7|DBP10_VANPO ATP-dependent RNA helicase DBP10 OS=Vanderw... 127 5e-29 sp|Q4R5S7|DDX4_MACFA Probable ATP-dependent RNA helicase DDX4 OS=... 127 5e-29 sp|A4QYM6|DRS1_PYRO7 ATP-dependent RNA helicase DRS1 OS=Pyricular... 127 5e-29 sp|Q5ZKB9|DDX6_CHICK Probable ATP-dependent RNA helicase DDX6 OS=... 125 5e-29 sp|Q2UQI6|DRS1_ASPOR ATP-dependent RNA helicase drs1 OS=Aspergill... 127 5e-29 sp|Q7S5D9|DHH1_NEUCR ATP-dependent RNA helicase dhh1 OS=Neurospor... 125 5e-29 sp|Q9NQI0|DDX4_HUMAN Probable ATP-dependent RNA helicase DDX4 OS=... 127 5e-29 sp|P26196|DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 OS=... 124 6e-29 sp|Q0UWC8|PRP28_PHANO Pre-mRNA-splicing ATP-dependent RNA helicas... 127 6e-29 sp|Q94BV4|RH6_ARATH DEAD-box ATP-dependent RNA helicase 6 OS=Arab... 125 6e-29 sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharo... 125 6e-29 sp|P47943|IF4A_SCHPO ATP-dependent RNA helicase eIF4A OS=Schizosa... 123 7e-29 sp|Q9DF35|DD21A_XENLA Nucleolar RNA helicase 2-A OS=Xenopus laevi... 127 7e-29 sp|Q5B3H7|DBP8_EMENI ATP-dependent RNA helicase dbp8 OS=Emericell... 125 8e-29 sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 O... 127 8e-29 sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Or... 126 9e-29 sp|Q6C7X8|DBP10_YARLI ATP-dependent RNA helicase DBP10 OS=Yarrowi... 127 9e-29 sp|Q4I7F9|PRP28_GIBZE Pre-mRNA-splicing ATP-dependent RNA helicas... 126 9e-29 sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens OX... 126 1e-28 sp|Q4E162|IF4A_TRYCC Probable eukaryotic initiation factor 4A OS=... 122 1e-28 sp|A5AA68|DBP8_ASPNC ATP-dependent RNA helicase dbp8 OS=Aspergill... 124 1e-28 sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8 OS=Arab... 124 1e-28 sp|Q553B1|DDX46_DICDI ATP-dependent RNA helicase ddx46 OS=Dictyos... 127 1e-28 sp|Q0U7S9|DHH1_PHANO ATP-dependent RNA helicase DHH1 OS=Phaeospha... 124 1e-28 sp|Q2H0R2|DBP10_CHAGB ATP-dependent RNA helicase DBP10 OS=Chaetom... 126 1e-28 sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicas... 125 1e-28 sp|Q8NJM2|DBP10_ASPFU ATP-dependent RNA helicase dbp10 OS=Aspergi... 126 1e-28 sp|Q39189|RH7_ARATH DEAD-box ATP-dependent RNA helicase 7 OS=Arab... 125 1e-28 sp|Q5U526|I4A3A_XENLA Eukaryotic initiation factor 4A-III-A OS=Xe... 122 1e-28 sp|Q0IHV9|DDX6_XENTR Probable ATP-dependent RNA helicase ddx6 OS=... 123 1e-28 sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergi... 126 1e-28 sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharo... 124 1e-28 sp|Q5BFU7|DBP10_EMENI ATP-dependent RNA helicase dbp10 OS=Emerice... 126 1e-28 sp|P44922|RHLB_HAEIN ATP-dependent RNA helicase RhlB OS=Haemophil... 122 1e-28 sp|P21507|SRMB_ECOLI ATP-dependent RNA helicase SrmB OS=Escherich... 122 1e-28 sp|Q61496|DDX4_MOUSE ATP-dependent RNA helicase DDX4 OS=Mus muscu... 125 1e-28 sp|Q4P331|IF4A_USTMA ATP-dependent RNA helicase eIF4A OS=Ustilago... 122 2e-28 sp|Q5W5U4|DDX4_BOVIN Probable ATP-dependent RNA helicase DDX4 OS=... 125 2e-28 sp|A3LWX3|DHH1_PICST ATP-dependent RNA helicase DHH1 OS=Scheffers... 123 2e-28 sp|A2QY39|DHH1_ASPNC ATP-dependent RNA helicase dhh1 OS=Aspergill... 123 2e-28 sp|Q7XMK8|RH6_ORYSJ DEAD-box ATP-dependent RNA helicase 6 OS=Oryz... 123 2e-28 sp|Q9JIK5|DDX21_MOUSE Nucleolar RNA helicase 2 OS=Mus musculus OX... 125 2e-28 sp|P54824|DDX6_XENLA ATP-dependent RNA helicase ddx6 OS=Xenopus l... 122 2e-28 sp|Q5ADL0|PRP5_CANAL Pre-mRNA-processing ATP-dependent RNA helica... 125 2e-28 sp|A6ZXU0|DBP10_YEAS7 ATP-dependent RNA helicase DBP10 OS=Sacchar... 125 3e-28 sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida ... 122 3e-28 sp|Q54E49|DDX6_DICDI Probable ATP-dependent RNA helicase ddx6 OS=... 121 3e-28 sp|Q3B8Q1|DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus norvegicus... 125 3e-28 sp|Q12389|DBP10_YEAST ATP-dependent RNA helicase DBP10 OS=Sacchar... 125 3e-28 sp|Q9DF36|DD21B_XENLA Nucleolar RNA helicase 2-B OS=Xenopus laevi... 125 3e-28 sp|Q4HZ42|DBP10_GIBZE ATP-dependent RNA helicase DBP10 OS=Gibbere... 125 3e-28 sp|Q75EW9|RRP3_EREGS ATP-dependent rRNA helicase RRP3 OS=Eremothe... 122 3e-28 sp|A1CJ18|DHH1_ASPCL ATP-dependent RNA helicase dhh1 OS=Aspergill... 122 3e-28 sp|A1DNG2|DBP10_NEOFI ATP-dependent RNA helicase dbp10 OS=Neosart... 125 3e-28 sp|Q0CMM8|DBP10_ASPTN ATP-dependent RNA helicase dbp10 OS=Aspergi... 125 4e-28 sp|Q109G2|RH12_ORYSJ DEAD-box ATP-dependent RNA helicase 12 OS=Or... 122 4e-28 sp|D0PV95|DDX3_CAEEL ATP-dependent RNA helicase laf-1 OS=Caenorha... 124 4e-28 sp|Q2U5A2|DHH1_ASPOR ATP-dependent RNA helicase dhh1 OS=Aspergill... 122 4e-28 sp|Q5RC67|DDX23_PONAB Probable ATP-dependent RNA helicase DDX23 O... 124 5e-28 sp|Q2UKX3|DBP8_ASPOR ATP-dependent RNA helicase dbp8 OS=Aspergill... 121 5e-28 sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosa... 121 5e-28 sp|A5DDF4|PRP5_PICGU Pre-mRNA-processing ATP-dependent RNA helica... 124 5e-28 sp|Q0CBE1|DHH1_ASPTN ATP-dependent RNA helicase dhh1 OS=Aspergill... 122 6e-28 sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helica... 124 6e-28 sp|Q4WWD3|DHH1_ASPFU ATP-dependent RNA helicase dhh1 OS=Aspergill... 122 7e-28 sp|Q09181|DHH1_SCHPO Putative ATP-dependent RNA helicase ste13 OS... 121 8e-28 sp|A4RIF1|DBP5_PYRO7 ATP-dependent RNA helicase DBP5 OS=Pyricular... 121 8e-28 sp|P0C2N8|DRS1_NEUCR ATP-dependent RNA helicase drs1 OS=Neurospor... 123 8e-28 sp|Q6BL34|DBP10_DEBHA ATP-dependent RNA helicase DBP10 OS=Debaryo... 124 9e-28 sp|Q2H1Q8|RRP3_CHAGB ATP-dependent rRNA helicase RRP3 OS=Chaetomi... 121 1e-27 sp|Q6H7S2|RH8_ORYSJ DEAD-box ATP-dependent RNA helicase 8 OS=Oryz... 121 1e-27 sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellom... 123 1e-27 sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Ar... 120 1e-27 sp|Q4R4Y9|IF4A2_MACFA Eukaryotic initiation factor 4A-II OS=Macac... 119 1e-27 sp|A1CTZ6|DBP10_ASPCL ATP-dependent RNA helicase dbp10 OS=Aspergi... 123 1e-27 sp|Q4HY71|DBP5_GIBZE ATP-dependent RNA helicase DBP5 OS=Gibberell... 120 1e-27 sp|Q5T1V6|DDX59_HUMAN Probable ATP-dependent RNA helicase DDX59 O... 122 1e-27 sp|Q4I830|DRS1_GIBZE ATP-dependent RNA helicase DRS1 OS=Gibberell... 122 1e-27 sp|Q75BL8|IF4A_EREGS ATP-dependent RNA helicase eIF4A OS=Eremothe... 119 1e-27 sp|Q0CZN5|DRS1_ASPTN ATP-dependent RNA helicase drs1 OS=Aspergill... 122 2e-27 sp|Q2GQ93|DHH1_CHAGB ATP-dependent RNA helicase DHH1 OS=Chaetomiu... 120 2e-27 sp|Q1E2B2|DRS1_COCIM ATP-dependent RNA helicase DRS1 OS=Coccidioi... 122 2e-27 sp|Q59W52|PRP28_CANAL Pre-mRNA-splicing ATP-dependent RNA helicas... 121 2e-27 sp|A6RC50|DBP5_AJECN ATP-dependent RNA helicase DBP5 OS=Ajellomyc... 120 2e-27 sp|P23128|DDX6_DROME ATP-dependent RNA helicase me31b OS=Drosophi... 120 2e-27 sp|Q6CT49|PRP28_KLULA Pre-mRNA-splicing ATP-dependent RNA helicas... 121 2e-27 sp|P44701|SRMB_HAEIN ATP-dependent RNA helicase SrmB OS=Haemophil... 119 2e-27 sp|Q818H2|CSHB_BACCR DEAD-box ATP-dependent RNA helicase CshB OS=... 119 2e-27 sp|Q0CIQ3|RRP3_ASPTN ATP-dependent rRNA helicase rrp3 OS=Aspergil... 119 2e-27 sp|A3LZT3|DBP10_PICST ATP-dependent RNA helicase DBP10 OS=Scheffe... 122 2e-27 sp|A6RJA2|PRP28_BOTFB Pre-mRNA-splicing ATP-dependent RNA helicas... 122 3e-27 sp|Q8TDD1|DDX54_HUMAN ATP-dependent RNA helicase DDX54 OS=Homo sa... 122 3e-27 sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Ar... 121 3e-27 sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergi... 122 3e-27 sp|A6RY31|DHH1_BOTFB ATP-dependent RNA helicase dhh1 OS=Botryotin... 120 3e-27 sp|Q6CH58|RRP3_YARLI ATP-dependent rRNA helicase RRP3 OS=Yarrowia... 119 3e-27 sp|Q4P9P3|DRS1_USTMA ATP-dependent RNA helicase DRS1 OS=Ustilago ... 121 4e-27 sp|Q65RG7|RHLB_MANSM ATP-dependent RNA helicase RhlB OS=Mannheimi... 118 4e-27 sp|A2RB17|RRP3_ASPNC ATP-dependent rRNA helicase rrp3 OS=Aspergil... 119 5e-27 sp|Q6FM43|PRP28_CANGA Pre-mRNA-splicing ATP-dependent RNA helicas... 120 5e-27 sp|Q1EB38|DBP10_COCIM ATP-dependent RNA helicase DBP10 OS=Coccidi... 121 6e-27 sp|Q6BRE4|DBP5_DEBHA ATP-dependent RNA helicase DBP5 OS=Debaryomy... 119 6e-27 sp|A3LQ55|PRP5_PICST Pre-mRNA-processing ATP-dependent RNA helica... 120 6e-27 sp|Q5RFQ5|DDX6_PONAB Probable ATP-dependent RNA helicase DDX6 OS=... 118 6e-27 sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Ar... 119 7e-27 sp|Q6CXT4|IF4A_KLULA ATP-dependent RNA helicase eIF4A OS=Kluyvero... 117 7e-27 sp|Q15N18|RHLB_PSEA6 ATP-dependent RNA helicase RhlB OS=Pseudoalt... 117 8e-27 sp|A1D6X9|DBP8_NEOFI ATP-dependent RNA helicase dbp8 OS=Neosartor... 119 8e-27 sp|Q4PDT1|DBP3_USTMA ATP-dependent RNA helicase DBP3 OS=Ustilago ... 119 9e-27 sp|P23394|PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicas... 119 1e-26 sp|A3LNL1|PRP28_PICST Pre-mRNA-splicing ATP-dependent RNA helicas... 118 1e-26 sp|Q4FZF3|DDX49_MOUSE Probable ATP-dependent RNA helicase DDX49 O... 118 1e-26 sp|A1CKJ0|DBP8_ASPCL ATP-dependent RNA helicase dbp8 OS=Aspergill... 118 1e-26 sp|Q8K4L0|DDX54_MOUSE ATP-dependent RNA helicase DDX54 OS=Mus mus... 120 1e-26 sp|Q7S9J4|DBP10_NEUCR ATP-dependent RNA helicase dbp-10 OS=Neuros... 120 1e-26 sp|Q4WCW2|SUB2_ASPFU ATP-dependent RNA helicase sub2 OS=Aspergill... 117 1e-26 sp|A3LS22|RRP3_PICST ATP-dependent rRNA helicase RRP3 OS=Scheffer... 117 1e-26 sp|A2QAX7|DRS1_ASPNC ATP-dependent RNA helicase drs1 OS=Aspergill... 120 1e-26 sp|Q5RKI1|IF4A2_RAT Eukaryotic initiation factor 4A-II OS=Rattus ... 116 1e-26 sp|Q5R4X1|IF4A2_PONAB Eukaryotic initiation factor 4A-II OS=Pongo... 116 1e-26 sp|P10630|IF4A2_MOUSE Eukaryotic initiation factor 4A-II OS=Mus m... 116 1e-26 sp|Q14240|IF4A2_HUMAN Eukaryotic initiation factor 4A-II OS=Homo ... 116 1e-26 sp|Q3SZ65|IF4A2_BOVIN Eukaryotic initiation factor 4A-II OS=Bos t... 116 1e-26 sp|Q8JFP1|IF4A2_CHICK Eukaryotic initiation factor 4A-II OS=Gallu... 116 1e-26 sp|A5E058|PRP5_LODEL Pre-mRNA-processing ATP-dependent RNA helica... 120 1e-26 sp|P0CQ74|DED1_CRYNJ ATP-dependent RNA helicase ded1 OS=Cryptococ... 119 1e-26 sp|P0CQ75|DED1_CRYNB ATP-dependent RNA helicase ded1 OS=Cryptococ... 119 1e-26 sp|Q9Y7T7|PRP28_SCHPO Pre-mRNA-splicing ATP-dependent RNA helicas... 119 2e-26 sp|Q0V1Z7|DRS1_PHANO ATP-dependent RNA helicase DRS1 OS=Phaeospha... 119 2e-26 sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 O... 119 2e-26 sp|A1D8G1|DHH1_NEOFI ATP-dependent RNA helicase dhh1 OS=Neosartor... 117 2e-26 sp|A7EGG4|PRP28_SCLS1 Pre-mRNA-splicing ATP-dependent RNA helicas... 119 2e-26 sp|A1CYG5|DBP5_NEOFI ATP-dependent RNA helicase dbp5 OS=Neosartor... 117 2e-26 sp|A1D405|RRP3_NEOFI ATP-dependent rRNA helicase rrp3 OS=Neosarto... 117 2e-26 sp|Q4R8K5|IF4A1_MACFA Eukaryotic initiation factor 4A-I OS=Macaca... 115 2e-26 sp|P60843|IF4A1_MOUSE Eukaryotic initiation factor 4A-I OS=Mus mu... 115 2e-26 sp|P60842|IF4A1_HUMAN Eukaryotic initiation factor 4A-I OS=Homo s... 115 2e-26 sp|Q3SZ54|IF4A1_BOVIN Eukaryotic initiation factor 4A-I OS=Bos ta... 115 2e-26 sp|O34750|YFML_BACSU Probable ATP-dependent RNA helicase YfmL OS=... 115 2e-26 sp|Q2HGF7|DBP5_CHAGB ATP-dependent RNA helicase DBP5 OS=Chaetomiu... 116 3e-26 sp|A7ESL7|DBP10_SCLS1 ATP-dependent RNA helicase dbp10 OS=Sclerot... 119 3e-26 sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Or... 118 3e-26 sp|Q6BML1|PRP5_DEBHA Pre-mRNA-processing ATP-dependent RNA helica... 119 3e-26 sp|A1DL85|SUB2_NEOFI ATP-dependent RNA helicase sub2 OS=Neosartor... 116 3e-26 sp|Q879Y6|RHLB_XYLFT ATP-dependent RNA helicase RhlB OS=Xylella f... 117 3e-26 sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptoco... 116 3e-26 sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptoco... 116 3e-26 sp|P29562|IF4A1_RABIT Eukaryotic initiation factor 4A-I (Fragment... 115 3e-26 sp|Q5R5F5|IF4A1_PONAB Eukaryotic initiation factor 4A-I OS=Pongo ... 115 3e-26 sp|Q6CJU1|DBP5_KLULA ATP-dependent RNA helicase DBP5 OS=Kluyverom... 116 3e-26 sp|Q9DBN9|DDX59_MOUSE Probable ATP-dependent RNA helicase DDX59 O... 117 4e-26 sp|Q4IFI0|RRP3_GIBZE ATP-dependent rRNA helicase RRP3 OS=Gibberel... 116 4e-26 sp|Q9Y6V7|DDX49_HUMAN Probable ATP-dependent RNA helicase DDX49 O... 116 4e-26 sp|Q757U8|DBP10_EREGS ATP-dependent RNA helicase DBP10 OS=Eremoth... 118 5e-26 sp|A6R9U4|MAK5_AJECN ATP-dependent RNA helicase MAK5 OS=Ajellomyc... 118 5e-26 sp|Q4WIN6|DBP5_ASPFU ATP-dependent RNA helicase dbp5 OS=Aspergill... 116 5e-26 sp|Q4WXW1|DBP8_ASPFU ATP-dependent RNA helicase dbp8 OS=Aspergill... 116 5e-26 sp|Q59PR3|DBP8_CANAL ATP-dependent RNA helicase DBP8 OS=Candida a... 115 5e-26 sp|Q6FQQ6|IF4A_CANGA ATP-dependent RNA helicase eIF4A OS=Candida ... 114 5e-26 sp|Q61655|DD19A_MOUSE ATP-dependent RNA helicase DDX19A OS=Mus mu... 115 5e-26 sp|Q2U6P7|SUB2_ASPOR ATP-dependent RNA helicase sub2 OS=Aspergill... 115 6e-26 sp|Q1E0Z3|DBP8_COCIM ATP-dependent RNA helicase DBP8 OS=Coccidioi... 116 6e-26 sp|A2R0B5|SUB2_ASPNC ATP-dependent RNA helicase sub2 OS=Aspergill... 115 6e-26 sp|Q8GUG7|RH50_ARATH DEAD-box ATP-dependent RNA helicase 50 OS=Ar... 117 7e-26 sp|A1D1R8|DRS1_NEOFI ATP-dependent RNA helicase drs1 OS=Neosartor... 117 7e-26 sp|Q6CIR0|DBP10_KLULA ATP-dependent RNA helicase DBP10 OS=Kluyver... 117 8e-26 sp|Q1EB85|DBP5_COCIM ATP-dependent RNA helicase DBP5 OS=Coccidioi... 115 8e-26 sp|A7TK55|IF4A_VANPO ATP-dependent RNA helicase eIF4A OS=Vanderwa... 114 8e-26 sp|Q6BQ61|RRP3_DEBHA ATP-dependent rRNA helicase RRP3 OS=Debaryom... 115 8e-26 sp|A5E6W6|RRP3_LODEL ATP-dependent rRNA helicase RRP3 OS=Lodderom... 115 8e-26 sp|Q8X0X2|DBP5_NEUCR ATP-dependent RNA helicase dbp-5 OS=Neurospo... 115 8e-26 sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Aspergil... 115 8e-26 sp|Q6FKN8|DBP5_CANGA ATP-dependent RNA helicase DBP5 OS=Candida g... 115 8e-26 sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Ar... 117 9e-26 sp|A5A6N4|IF4A1_PANTR Eukaryotic initiation factor 4A-I OS=Pan tr... 114 9e-26 sp|Q2FY15|CSHB_STAA8 DEAD-box ATP-dependent RNA helicase CshB OS=... 114 9e-26 sp|Q5GUR8|RHLB_XANOR ATP-dependent RNA helicase RhlB OS=Xanthomon... 116 9e-26 sp|A6SBT4|DBP5_BOTFB ATP-dependent RNA helicase dbp5 OS=Botryotin... 114 1e-25 sp|A1CMQ7|SUB2_ASPCL ATP-dependent RNA helicase sub2 OS=Aspergill... 114 1e-25 sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomy... 116 1e-25 sp|Q40469|IF4A6_TOBAC Eukaryotic initiation factor 4A-6 (Fragment... 110 1e-25 sp|A1CNV8|DRS1_ASPCL ATP-dependent RNA helicase drs1 OS=Aspergill... 117 1e-25 sp|A5DZX2|DBP5_LODEL ATP-dependent RNA helicase DBP5 OS=Lodderomy... 115 1e-25 sp|Q810A7|DDX42_MOUSE ATP-dependent RNA helicase DDX42 OS=Mus mus... 117 1e-25 sp|Q9LFN6|RH56_ARATH DEAD-box ATP-dependent RNA helicase 56 OS=Ar... 113 1e-25 sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15 OS=Ar... 113 1e-25 sp|Q9UMR2|DD19B_HUMAN ATP-dependent RNA helicase DDX19B OS=Homo s... 114 1e-25 sp|Q86XP3|DDX42_HUMAN ATP-dependent RNA helicase DDX42 OS=Homo sa... 116 1e-25 sp|Q7ZY47|DDX42_XENLA ATP-dependent RNA helicase DDX42 OS=Xenopus... 116 1e-25 sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergil... 114 2e-25 sp|Q4P3U9|RRP3_USTMA ATP-dependent rRNA helicase RRP3 OS=Ustilago... 115 2e-25 sp|Q750Q4|MS116_EREGS ATP-dependent RNA helicase MSS116, mitochon... 115 2e-25 sp|Q3ZBV2|DD19A_BOVIN ATP-dependent RNA helicase DDX19A OS=Bos ta... 114 2e-25 sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Or... 115 2e-25 sp|Q4WRV2|DRS1_ASPFU ATP-dependent RNA helicase drs1 OS=Aspergill... 116 2e-25 sp|P10081|IF4A_YEAST ATP-dependent RNA helicase eIF4A OS=Saccharo... 112 2e-25 sp|A6ZQJ1|IF4A_YEAS7 ATP-dependent RNA helicase eIF4A OS=Saccharo... 112 2e-25 sp|A7EML8|RRP3_SCLS1 ATP-dependent rRNA helicase rrp3 OS=Scleroti... 114 2e-25 sp|Q5ACK7|DRS1_CANAL ATP-dependent RNA helicase DRS1 OS=Candida a... 115 2e-25 sp|Q5R7D1|DDX42_PONAB ATP-dependent RNA helicase DDX42 OS=Pongo a... 115 3e-25 sp|Q3BNH8|RHLB_XANC5 ATP-dependent RNA helicase RhlB OS=Xanthomon... 114 3e-25 sp|Q86TM3|DDX53_HUMAN Probable ATP-dependent RNA helicase DDX53 O... 115 3e-25 sp|Q8PFZ3|RHLB_XANAC ATP-dependent RNA helicase RhlB OS=Xanthomon... 114 3e-25 sp|A6R603|SUB2_AJECN ATP-dependent RNA helicase SUB2 OS=Ajellomyc... 113 3e-25 sp|A1CR32|RRP3_ASPCL ATP-dependent rRNA helicase rrp3 OS=Aspergil... 113 3e-25 sp|A5DQF1|RRP3_PICGU ATP-dependent rRNA helicase RRP3 OS=Meyerozy... 113 3e-25 sp|Q8P4D4|RHLB_XANCP ATP-dependent RNA helicase RhlB OS=Xanthomon... 114 3e-25 sp|B0RWT6|RHLB_XANCB ATP-dependent RNA helicase RhlB OS=Xanthomon... 114 3e-25 sp|Q4UPY5|RHLB_XANC8 ATP-dependent RNA helicase RhlB OS=Xanthomon... 114 3e-25 sp|Q7RY59|RRP3_NEUCR ATP-dependent rRNA helicase rrp-3 OS=Neurosp... 114 3e-25 sp|Q921N6|DDX27_MOUSE Probable ATP-dependent RNA helicase DDX27 O... 115 4e-25 sp|Q0CGJ9|SUB2_ASPTN ATP-dependent RNA helicase sub2 OS=Aspergill... 112 4e-25 sp|A1A4H6|DDX27_BOVIN Probable ATP-dependent RNA helicase DDX27 O... 115 4e-25 sp|P0CQ86|DBP5_CRYNJ ATP-dependent RNA helicase DBP5 OS=Cryptococ... 114 4e-25 sp|Q5ASK8|SUB2_EMENI ATP-dependent RNA helicase sub2 OS=Emericell... 112 4e-25 sp|P0CQ82|DBP4_CRYNJ ATP-dependent RNA helicase DBP4 OS=Cryptococ... 115 4e-25 sp|P0CQ83|DBP4_CRYNB ATP-dependent RNA helicase DBP4 OS=Cryptococ... 115 4e-25 sp|Q9FLB0|RH18_ARATH DEAD-box ATP-dependent RNA helicase 18 OS=Ar... 114 5e-25 sp|Q9NUU7|DD19A_HUMAN ATP-dependent RNA helicase DDX19A OS=Homo s... 112 6e-25 sp|P0CQ87|DBP5_CRYNB ATP-dependent RNA helicase DBP5 OS=Cryptococ... 113 6e-25 sp|P20449|DBP5_YEAST ATP-dependent RNA helicase DBP5 OS=Saccharom... 112 7e-25 sp|A6ZNQ1|DBP5_YEAS7 ATP-dependent RNA helicase DBP5 OS=Saccharom... 112 7e-25 sp|Q9HGM5|DBP8_SCHPO ATP-dependent RNA helicase dbp8 OS=Schizosac... 112 7e-25 sp|Q2H4D0|SUB2_CHAGB ATP-dependent RNA helicase SUB2 OS=Chaetomiu... 111 8e-25 sp|Q5F485|DDX42_CHICK ATP-dependent RNA helicase DDX42 OS=Gallus ... 114 9e-25 sp|Q6FNA2|DBP10_CANGA ATP-dependent RNA helicase DBP10 OS=Candida... 114 1e-24 sp|Q6CH90|SUB2_YARLI ATP-dependent RNA helicase SUB2 OS=Yarrowia ... 111 1e-24 sp|Q4P3W3|DBP10_USTMA ATP-dependent RNA helicase DBP10 OS=Ustilag... 114 1e-24 sp|Q96GQ7|DDX27_HUMAN Probable ATP-dependent RNA helicase DDX27 O... 113 1e-24 sp|A4RBS3|SUB2_PYRO7 ATP-dependent RNA helicase SUB2 OS=Pyricular... 110 1e-24 sp|Q6FW42|DRS1_CANGA ATP-dependent RNA helicase DRS1 OS=Candida g... 113 1e-24 sp|Q6BGU8|DBP8_DEBHA ATP-dependent RNA helicase DBP8 OS=Debaryomy... 110 2e-24 sp|P0CQ92|DRS1_CRYNJ ATP-dependent RNA helicase DRS1 OS=Cryptococ... 113 2e-24 sp|P0CQ93|DRS1_CRYNB ATP-dependent RNA helicase DRS1 OS=Cryptococ... 113 2e-24 sp|Q759L6|SUB2_EREGS ATP-dependent RNA helicase SUB2 OS=Eremothec... 110 2e-24 sp|Q1DI07|SUB2_COCIM ATP-dependent RNA helicase SUB2 OS=Coccidioi... 110 2e-24 sp|A7F4L5|DRS1_SCLS1 ATP-dependent RNA helicase drs1 OS=Sclerotin... 112 2e-24 sp|Q0U8V9|DBP8_PHANO ATP-dependent RNA helicase DBP8 OS=Phaeospha... 111 2e-24 sp|Q0CNX1|DBP8_ASPTN ATP-dependent RNA helicase dbp8 OS=Aspergill... 111 3e-24 sp|Q0JM17|RH56_ORYSJ DEAD-box ATP-dependent RNA helicase 56 OS=Or... 110 3e-24 sp|A6RUH2|DRS1_BOTFB ATP-dependent RNA helicase drs1 OS=Botryotin... 112 3e-24 sp|Q5ACU6|RRP3_CANAL ATP-dependent rRNA helicase RRP3 OS=Candida ... 110 3e-24 sp|Q5JK84|RH15_ORYSJ DEAD-box ATP-dependent RNA helicase 15 OS=Or... 109 3e-24 sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein U-l... 112 3e-24 sp|Q9CWX9|DDX47_MOUSE Probable ATP-dependent RNA helicase DDX47 O... 109 4e-24 sp|A5E0U9|DBP8_LODEL ATP-dependent RNA helicase DBP8 OS=Lodderomy... 109 4e-24 sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 O... 109 4e-24 sp|A3GH91|DBP5_PICST ATP-dependent RNA helicase DBP5 OS=Scheffers... 110 4e-24 sp|Q9BUJ2|HNRL1_HUMAN Heterogeneous nuclear ribonucleoprotein U-l... 112 5e-24 sp|Q6P9R1|DDX51_MOUSE ATP-dependent RNA helicase DDX51 OS=Mus mus... 111 5e-24 sp|Q8SQM5|IF4A_ENCCU ATP-dependent RNA helicase eIF4A OS=Encephal... 108 5e-24 sp|Q18212|DX39B_CAEEL Spliceosome RNA helicase DDX39B homolog OS=... 108 6e-24 sp|A7TJM9|DRS1_VANPO ATP-dependent RNA helicase DRS1 OS=Vanderwal... 111 6e-24 sp|Q8L4E9|RH36_ORYSJ DEAD-box ATP-dependent RNA helicase 36 OS=Or... 109 7e-24 sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1 OS=Caenorha... 111 7e-24 sp|Q5AJD0|DBP5_CANAL ATP-dependent RNA helicase DBP5 OS=Candida a... 109 8e-24 sp|O13792|SUB2_SCHPO ATP-dependent RNA helicase uap56 OS=Schizosa... 108 8e-24 sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2 OS=Caenorha... 111 8e-24 sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomy... 108 9e-24 sp|Q0UN57|PRP5_PHANO Pre-mRNA-processing ATP-dependent RNA helica... 111 1e-23 sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidio... 108 1e-23 sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 O... 110 1e-23 sp|A7TJK8|PRP5_VANPO Pre-mRNA-processing ATP-dependent RNA helica... 110 1e-23 sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=... 110 1e-23 sp|A6SFV4|DBP8_BOTFB ATP-dependent RNA helicase dbp8 OS=Botryotin... 109 1e-23 sp|Q0UK12|RRP3_PHANO ATP-dependent rRNA helicase RRP3 OS=Phaeosph... 109 1e-23 sp|A3AVH5|RH13_ORYSJ DEAD-box ATP-dependent RNA helicase 13 OS=Or... 110 1e-23 sp|A2XVF7|RH13_ORYSI DEAD-box ATP-dependent RNA helicase 13 OS=Or... 110 1e-23 sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 O... 110 1e-23 sp|A5DBI5|DBP5_PICGU ATP-dependent RNA helicase DBP5 OS=Meyerozym... 108 1e-23 sp|Q75C39|DBP5_EREGS ATP-dependent RNA helicase DBP5 OS=Eremothec... 108 1e-23 sp|Q9QY16|DDX25_RAT ATP-dependent RNA helicase DDX25 OS=Rattus no... 108 1e-23 sp|A7TTT5|DBP2_VANPO ATP-dependent RNA helicase DBP2 OS=Vanderwal... 107 1e-23 sp|Q6C3X7|DBP5_YARLI ATP-dependent RNA helicase DBP5 OS=Yarrowia ... 108 1e-23 sp|P32892|DRS1_YEAST ATP-dependent RNA helicase DRS1 OS=Saccharom... 110 2e-23 sp|A7A0P8|DRS1_YEAS7 ATP-dependent RNA helicase DRS1 OS=Saccharom... 110 2e-23 sp|A6RW56|RRP3_BOTFB ATP-dependent rRNA helicase rrp3 OS=Botryoti... 108 2e-23 sp|Q29S22|DDX47_BOVIN Probable ATP-dependent RNA helicase DDX47 O... 107 2e-23 sp|Q8SQK9|DHH1_ENCCU ATP-dependent RNA helicase DHH1 OS=Encephali... 108 2e-23 sp|Q8W4E1|RH47_ARATH DEAD-box ATP-dependent RNA helicase 47, mito... 108 2e-23 sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 O... 109 2e-23 sp|Q6CM95|SUB2_KLULA ATP-dependent RNA helicase SUB2 OS=Kluyverom... 107 3e-23 sp|Q10PV9|RH47B_ORYSJ DEAD-box ATP-dependent RNA helicase 47B OS=... 108 3e-23 sp|Q93Y39|RH13_ARATH DEAD-box ATP-dependent RNA helicase 13 OS=Ar... 109 3e-23 sp|Q6C799|DBP8_YARLI ATP-dependent RNA helicase DBP8 OS=Yarrowia ... 107 3e-23 sp|Q2U8K6|DBP5_ASPOR ATP-dependent RNA helicase dbp5 OS=Aspergill... 107 3e-23 sp|Q0CI35|MAK5_ASPTN ATP-dependent RNA helicase mak5 OS=Aspergill... 108 4e-23 sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosac... 108 4e-23 sp|A7EY76|DBP5_SCLS1 ATP-dependent RNA helicase dbp5 OS=Sclerotin... 107 4e-23 sp|Q6CJV1|DRS1_KLULA ATP-dependent RNA helicase DRS1 OS=Kluyverom... 108 4e-23 sp|Q756G5|DBP8_EREGS ATP-dependent RNA helicase DBP8 OS=Eremothec... 106 4e-23 sp|Q8SR63|RRP3_ENCCU ATP-dependent rRNA helicase RRP3 OS=Encephal... 105 4e-23 sp|A4REU9|MAK5_PYRO7 ATP-dependent RNA helicase MAK5 OS=Pyricular... 108 5e-23 sp|Q9UHL0|DDX25_HUMAN ATP-dependent RNA helicase DDX25 OS=Homo sa... 107 5e-23 sp|Q6BME5|SUB2_DEBHA ATP-dependent RNA helicase SUB2 OS=Debaryomy... 106 5e-23 sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 O... 108 5e-23 sp|A4RGU2|DBP4_PYRO7 ATP-dependent RNA helicase DBP4 OS=Pyricular... 108 5e-23 sp|Q9SA27|RH36_ARATH DEAD-box ATP-dependent RNA helicase 36 OS=Ar... 106 6e-23 sp|A7EIX7|SUB2_SCLS1 ATP-dependent RNA helicase sub2 OS=Sclerotin... 105 6e-23 sp|Q4WMS3|MAK5_ASPFU ATP-dependent RNA helicase mak5 OS=Aspergill... 108 6e-23 sp|Q0CDT1|DBP5_ASPTN ATP-dependent RNA helicase dbp5 OS=Aspergill... 106 7e-23 sp|P21372|PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helica... 108 7e-23 sp|Q2TBP1|DDX25_BOVIN ATP-dependent RNA helicase DDX25 OS=Bos tau... 106 8e-23 sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=Or... 107 8e-23 sp|A6ZLH6|PRP5_YEAS7 Pre-mRNA-processing ATP-dependent RNA helica... 107 8e-23 sp|A3LP87|DBP8_PICST ATP-dependent RNA helicase DBP8 OS=Scheffers... 105 8e-23 sp|A4RGD1|RRP3_PYRO7 ATP-dependent rRNA helicase RRP3 OS=Pyricula... 106 1e-22 sp|A5DZT7|DBP10_LODEL ATP-dependent RNA helicase DBP10 OS=Loddero... 107 1e-22 sp|Q9VIF6|DDX47_DROME ATP-dependent RNA helicase DDX47 OS=Drosoph... 106 1e-22 sp|Q4I662|DBP8_GIBZE ATP-dependent RNA helicase DBP8 OS=Gibberell... 106 1e-22 sp|Q0TXZ2|SUB2_PHANO ATP-dependent RNA helicase SUB2 OS=Phaeospha... 105 1e-22 sp|Q81E85|CSHC_BACCR DEAD-box ATP-dependent RNA helicase CshC OS=... 104 1e-22 sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia ... 105 1e-22 sp|Q9QY15|DDX25_MOUSE ATP-dependent RNA helicase DDX25 OS=Mus mus... 105 1e-22 sp|Q6H874|RH47A_ORYSJ DEAD-box ATP-dependent RNA helicase 47A OS=... 106 2e-22 sp|A1CFV3|DBP5_ASPCL ATP-dependent RNA helicase dbp5 OS=Aspergill... 105 2e-22 sp|Q5ZHZ0|DX39B_CHICK Spliceosome RNA helicase DDX39B OS=Gallus g... 104 2e-22 sp|A2QWW0|MAK5_ASPNC ATP-dependent RNA helicase mak5 OS=Aspergill... 106 2e-22 sp|Q4PEX7|DBP8_USTMA ATP-dependent RNA helicase DBP8 OS=Ustilago ... 105 2e-22 sp|Q54VT4|DDX47_DICDI Probable ATP-dependent RNA helicase ddx47 O... 105 2e-22 sp|A5DDN0|SUB2_PICGU ATP-dependent RNA helicase SUB2 OS=Meyerozym... 103 2e-22 sp|Q4P7Z8|DBP5_USTMA ATP-dependent RNA helicase DBP5 OS=Ustilago ... 104 3e-22 sp|P0CQ96|SUB2_CRYNJ ATP-dependent RNA helicase SUB2 OS=Cryptococ... 103 3e-22 sp|P0CQ97|SUB2_CRYNB ATP-dependent RNA helicase SUB2 OS=Cryptococ... 103 3e-22 sp|Q754U8|PRP5_EREGS Pre-mRNA-processing ATP-dependent RNA helica... 106 3e-22 sp|Q9FZ92|RH44_ARATH Putative DEAD-box ATP-dependent RNA helicase... 105 3e-22 sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericel... 104 3e-22 sp|Q6FML5|PRP5_CANGA Pre-mRNA-processing ATP-dependent RNA helica... 105 3e-22 sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozym... 105 3e-22 sp|O60173|DBP7_SCHPO ATP-dependent RNA helicase dbp7 OS=Schizosac... 105 4e-22 sp|Q8VDW0|DX39A_MOUSE ATP-dependent RNA helicase DDX39A OS=Mus mu... 103 4e-22 sp|A7TK63|DBP8_VANPO ATP-dependent RNA helicase DBP8 OS=Vanderwal... 103 4e-22 sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4 OS=Caenorha... 105 5e-22 sp|Q3T147|DX39B_BOVIN Spliceosome RNA helicase DDX39B OS=Bos taur... 103 5e-22 sp|Q0J7Y8|RH45_ORYSJ DEAD-box ATP-dependent RNA helicase 45 OS=Or... 105 5e-22 sp|A5E3W5|SUB2_LODEL ATP-dependent RNA helicase SUB2 OS=Lodderomy... 103 5e-22 sp|Q63413|DX39B_RAT Spliceosome RNA helicase Ddx39b OS=Rattus nor... 103 5e-22 sp|Q9Z1N5|DX39B_MOUSE Spliceosome RNA helicase Ddx39b OS=Mus musc... 103 5e-22 sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Scheffers... 105 5e-22 sp|Q9GZR7|DDX24_HUMAN ATP-dependent RNA helicase DDX24 OS=Homo sa... 105 5e-22 sp|A2QUY7|DBP5_ASPNC ATP-dependent RNA helicase dbp5 OS=Aspergill... 103 6e-22 sp|Q5U216|DX39A_RAT ATP-dependent RNA helicase DDX39A OS=Rattus n... 102 6e-22 sp|Q5RE47|DX39B_PONAB Spliceosome RNA helicase DDX39B OS=Pongo ab... 102 6e-22 sp|Q29024|DX39B_PIG Spliceosome RNA helicase DDX39B OS=Sus scrofa... 102 6e-22 sp|P60024|DX39B_PANTR Spliceosome RNA helicase DDX39B OS=Pan trog... 102 6e-22 sp|Q5TM17|DX39B_MACMU Spliceosome RNA helicase DDX39B OS=Macaca m... 102 6e-22 sp|Q13838|DX39B_HUMAN Spliceosome RNA helicase DDX39B OS=Homo sap... 102 6e-22 sp|Q5WR10|DX39B_CANLF Spliceosome RNA helicase DDX39B OS=Canis lu... 102 6e-22 sp|A3LST5|SUB2_PICST ATP-dependent RNA helicase SUB2 OS=Scheffers... 102 6e-22 sp|Q5AVM1|DBP5_EMENI ATP-dependent RNA helicase dbp5 OS=Emericell... 103 6e-22 sp|Q5RDL2|DDX24_PONAB ATP-dependent RNA helicase DDX24 OS=Pongo a... 105 6e-22 sp|Q27268|DX39B_DROME ATP-dependent RNA helicase WM6 OS=Drosophil... 102 8e-22 sp|A1DMT9|MAK5_NEOFI ATP-dependent RNA helicase mak5 OS=Neosartor... 104 9e-22 sp|Q40466|IF413_TOBAC Eukaryotic initiation factor 4A-13 (Fragmen... 100 1e-21 sp|A6ZXP4|SUB2_YEAS7 ATP-dependent RNA helicase SUB2 OS=Saccharom... 102 1e-21 sp|Q9H8H2|DDX31_HUMAN Probable ATP-dependent RNA helicase DDX31 O... 104 1e-21 sp|Q07478|SUB2_YEAST ATP-dependent RNA helicase SUB2 OS=Saccharom... 102 1e-21 sp|O00148|DX39A_HUMAN ATP-dependent RNA helicase DDX39A OS=Homo s... 102 1e-21 sp|Q5A9Z6|FAL1_CANAL ATP-dependent RNA helicase FAL1 OS=Candida a... 101 1e-21 sp|Q6FL17|SUB2_CANGA ATP-dependent RNA helicase SUB2 OS=Candida g... 102 1e-21 sp|Q84T03|RH27_ORYSJ DEAD-box ATP-dependent RNA helicase 27 OS=Or... 103 1e-21 sp|Q6CKI1|PRP5_KLULA Pre-mRNA-processing ATP-dependent RNA helica... 103 2e-21 sp|O01836|GLH3_CAEEL ATP-dependent RNA helicase glh-3 OS=Caenorha... 103 2e-21 sp|A7TEG8|MAK5_VANPO ATP-dependent RNA helicase MAK5 OS=Vanderwal... 103 2e-21 sp|Q6DRI7|DDX51_DANRE ATP-dependent RNA helicase DDX51 OS=Danio r... 103 2e-21 sp|Q6FQZ0|DBP8_CANGA ATP-dependent RNA helicase DBP8 OS=Candida g... 101 2e-21 sp|Q6BTL5|DRS1_DEBHA ATP-dependent RNA helicase DRS1 OS=Debaryomy... 103 2e-21 sp|Q4P5U4|DBP4_USTMA ATP-dependent RNA helicase DBP4 OS=Ustilago ... 103 3e-21 sp|Q54ZI9|DDX20_DICDI Probable ATP-dependent RNA helicase ddx20 O... 102 3e-21 sp|Q6BPT8|DBP6_DEBHA ATP-dependent RNA helicase DBP6 OS=Debaryomy... 101 4e-21 sp|Q0UCB9|DBP5_PHANO ATP-dependent RNA helicase DBP5 OS=Phaeospha... 100 4e-21 sp|Q5ZLN8|DDX55_CHICK ATP-dependent RNA helicase DDX55 OS=Gallus ... 101 4e-21 sp|P38719|DBP8_YEAST ATP-dependent RNA helicase DBP8 OS=Saccharom... 100 4e-21 sp|A6ZT77|DBP8_YEAS7 ATP-dependent RNA helicase DBP8 OS=Saccharom... 100 4e-21 sp|Q5BCI0|MAK5_EMENI ATP-dependent RNA helicase mak5 OS=Emericell... 102 5e-21 sp|A5DLE0|DBP8_PICGU ATP-dependent RNA helicase DBP8 OS=Meyerozym... 100 5e-21 sp|A7TJT7|SUB22_VANPO ATP-dependent RNA helicase SUB2-2 OS=Vander... 100 5e-21 sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=Ar... 101 5e-21 sp|Q54TF8|DDX19_DICDI ATP-dependent RNA helicase ddx19 OS=Dictyos... 100 5e-21 sp|Q6CSZ7|DHH1_KLULA ATP-dependent RNA helicase DHH1 OS=Kluyverom... 100 6e-21 sp|A2QS00|DBP4_ASPNC ATP-dependent RNA helicase dbp4 OS=Aspergill... 101 7e-21 sp|Q1EB31|DBP4_COCIM ATP-dependent RNA helicase DBP4 OS=Coccidioi... 101 8e-21 sp|Q00PI9|HNRL2_MOUSE Heterogeneous nuclear ribonucleoprotein U-l... 101 8e-21 sp|Q0UMB9|DBP4_PHANO ATP-dependent RNA helicase DBP4 OS=Phaeospha... 101 9e-21 sp|Q2UHB7|DBP4_ASPOR ATP-dependent RNA helicase dbp4 OS=Aspergill... 101 9e-21 sp|Q09747|DBP5_SCHPO ATP-dependent RNA helicase dbp5 OS=Schizosac... 100 9e-21 sp|Q0DBS1|RH51_ORYSJ Putative DEAD-box ATP-dependent RNA helicase... 100 1e-20 sp|Q55BR9|DDX49_DICDI Probable ATP-dependent RNA helicase ddx49 O... 99.8 1e-20 sp|Q7RYZ7|DBP8_NEUCR ATP-dependent RNA helicase dbp-8 OS=Neurospo... 100 1e-20 sp|Q07886|DDX49_DROME Probable ATP-dependent RNA helicase Dbp45A ... 99.8 1e-20 sp|Q9ESV0|DDX24_MOUSE ATP-dependent RNA helicase DDX24 OS=Mus mus... 100 1e-20 sp|Q6AZV7|DDX55_XENLA ATP-dependent RNA helicase DDX55 OS=Xenopus... 100 2e-20 sp|A7TLA0|SUB21_VANPO ATP-dependent RNA helicase SUB2-1 OS=Vander... 98.6 2e-20 sp|Q6CQA1|MS116_KLULA ATP-dependent RNA helicase MSS116, mitochon... 100 2e-20 sp|Q7RZ35|DBP4_NEUCR ATP-dependent RNA helicase dbp-4 OS=Neurospo... 100 2e-20 sp|P90897|RDE12_CAEEL DEAD-box ATP-dependent RNA helicase rde-12 ... 100 2e-20 sp|Q3EBD3|RH41_ARATH DEAD-box ATP-dependent RNA helicase 41 OS=Ar... 99.0 2e-20 sp|Q5BFU1|DBP4_EMENI ATP-dependent RNA helicase dbp4 OS=Emericell... 100 2e-20 sp|Q9UHI6|DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 O... 100 2e-20 sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-l... 99.8 2e-20 sp|Q59MW2|DBP6_CANAL ATP-dependent RNA helicase DBP6 OS=Candida a... 99.4 3e-20 sp|Q9SB89|RH27_ARATH DEAD-box ATP-dependent RNA helicase 27 OS=Ar... 99.0 3e-20 sp|Q09775|ROK1_SCHPO ATP-dependent RNA helicase rok1 OS=Schizosac... 98.2 3e-20 sp|A1DNF9|DBP4_NEOFI ATP-dependent RNA helicase dbp4 OS=Neosartor... 99.0 5e-20 sp|Q13206|DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 O... 99.0 5e-20 sp|Q4WM60|DBP4_ASPFU ATP-dependent RNA helicase dbp4 OS=Aspergill... 98.6 6e-20 sp|Q86B47|Y8611_DROME Probable ATP-dependent RNA helicase CG8611 ... 98.6 7e-20 sp|Q76PD3|DBP6_SCHPO ATP-dependent RNA helicase dbp6 OS=Schizosac... 97.8 8e-20 sp|Q1E9T9|DBP7_COCIM ATP-dependent RNA helicase DBP7 OS=Coccidioi... 98.2 8e-20 sp|P0CR06|DBP10_CRYNJ ATP-dependent RNA helicase DBP10 OS=Cryptoc... 98.2 9e-20 sp|P0CR07|DBP10_CRYNB ATP-dependent RNA helicase DBP10 OS=Cryptoc... 98.2 9e-20 sp|Q0CMM5|DBP4_ASPTN ATP-dependent RNA helicase dbp4 OS=Aspergill... 98.2 9e-20 sp|Q5ZJF6|DDX10_CHICK Probable ATP-dependent RNA helicase DDX10 O... 98.2 9e-20 sp|Q9JJY4|DDX20_MOUSE Probable ATP-dependent RNA helicase DDX20 O... 98.2 1e-19 sp|Q6BSM3|SPB4_DEBHA ATP-dependent rRNA helicase SPB4 OS=Debaryom... 97.4 1e-19 sp|A3LWH3|DBP7_PICST ATP-dependent RNA helicase DBP7 OS=Scheffers... 97.8 1e-19 sp|A5E3K3|DBP4_LODEL ATP-dependent RNA helicase DBP4 OS=Lodderomy... 97.8 1e-19 sp|P0C218|DDX20_DANRE Probable ATP-dependent RNA helicase DDX20 O... 97.4 1e-19 sp|Q5APM7|MS116_CANAL ATP-dependent RNA helicase MSS116, mitochon... 97.4 1e-19 sp|Q54S03|DDX18_DICDI Probable ATP-dependent RNA helicase ddx18 O... 97.1 1e-19 sp|A7TFZ9|DBP6_VANPO ATP-dependent RNA helicase DBP6 OS=Vanderwal... 96.7 2e-19 sp|A5DGM4|SPB4_PICGU ATP-dependent rRNA helicase SPB4 OS=Meyerozy... 96.7 2e-19 sp|Q2UUN6|HAS1_ASPOR ATP-dependent RNA helicase has1 OS=Aspergill... 96.3 2e-19 sp|Q761Z9|RH18_ORYSJ DEAD-box ATP-dependent RNA helicase 18 OS=Or... 96.7 2e-19 sp|Q6FY67|MAK5_CANGA ATP-dependent RNA helicase MAK5 OS=Candida g... 96.7 2e-19 sp|A7F8V8|DBP7_SCLS1 ATP-dependent RNA helicase dbp7 OS=Sclerotin... 97.1 2e-19 sp|Q80Y44|DDX10_MOUSE Probable ATP-dependent RNA helicase DDX10 O... 96.7 3e-19 sp|Q6CXW0|DBP8_KLULA ATP-dependent RNA helicase DBP8 OS=Kluyverom... 94.7 3e-19 sp|Q9VVK8|DDX52_DROME Probable ATP-dependent RNA helicase DDX52 O... 95.9 3e-19 sp|Q0D622|RH32_ORYSJ DEAD-box ATP-dependent RNA helicase 32 OS=Or... 96.3 3e-19 sp|A3LSJ2|DBP6_PICST ATP-dependent RNA helicase DBP6 OS=Scheffers... 95.5 4e-19 sp|Q93ZG7|RH38_ARATH DEAD-box ATP-dependent RNA helicase 38 OS=Ar... 94.7 5e-19 sp|A3LX02|SPB4_PICST ATP-dependent rRNA helicase SPB4 OS=Scheffer... 95.1 6e-19 sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 O... 94.7 6e-19 sp|Q6FU81|MS116_CANGA ATP-dependent RNA helicase MSS116, mitochon... 95.1 7e-19 sp|Q8JHJ2|DDX55_DANRE ATP-dependent RNA helicase DDX55 OS=Danio r... 94.7 7e-19 sp|O61305|DDX19_DROME DEAD-box helicase Dbp80 OS=Drosophila melan... 93.6 8e-19 sp|A5DTK7|MS116_LODEL ATP-dependent RNA helicase MSS116, mitochon... 94.7 1e-18 sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 O... 94.4 1e-18 sp|A7TJ71|DBP4_VANPO ATP-dependent RNA helicase DBP4 OS=Vanderwal... 94.7 1e-18 sp|Q9VHU1|DDX55_DROME Probable ATP-dependent RNA helicase DDX55 h... 94.0 1e-18 sp|A5DLF4|DBP4_PICGU ATP-dependent RNA helicase DBP4 OS=Meyerozym... 94.4 1e-18 sp|Q9CWT6|DDX28_MOUSE Probable ATP-dependent RNA helicase DDX28 O... 93.6 1e-18 sp|Q6CDN5|DBP6_YARLI ATP-dependent RNA helicase DBP6 OS=Yarrowia ... 93.6 1e-18 sp|P75172|Y623_MYCPN Probable ATP-dependent RNA helicase MG425 ho... 92.4 2e-18 sp|A5DID7|HAS1_PICGU ATP-dependent RNA helicase HAS1 OS=Meyerozym... 93.2 2e-18 sp|Q6BZR4|DBP9_YARLI ATP-dependent RNA helicase DBP9 OS=Yarrowia ... 93.2 2e-18 sp|A4R8B5|HAS1_PYRO7 ATP-dependent RNA helicase HAS1 OS=Pyricular... 93.2 2e-18 sp|Q0C9E8|MRH4_ASPTN ATP-dependent RNA helicase mrh4, mitochondri... 93.6 2e-18 sp|Q54Q94|DDX10_DICDI Probable ATP-dependent RNA helicase ddx10 O... 94.0 2e-18 sp|Q2H2J1|DBP4_CHAGB ATP-dependent RNA helicase DBP4 OS=Chaetomiu... 93.6 2e-18 sp|Q2NL08|DDX55_BOVIN ATP-dependent RNA helicase DDX55 OS=Bos tau... 92.8 3e-18 sp|A7EAY2|MAK5_SCLS1 ATP-dependent RNA helicase mak5 OS=Sclerotin... 93.6 3e-18 sp|Q4WRP2|MS116_ASPFU ATP-dependent RNA helicase mss116, mitochon... 93.2 3e-18 sp|Q59S50|DBP7_CANAL ATP-dependent RNA helicase DBP7 OS=Candida a... 93.2 3e-18 sp|A1CTZ2|DBP4_ASPCL ATP-dependent RNA helicase dbp4 OS=Aspergill... 93.2 3e-18 sp|Q59N29|SPB4_CANAL ATP-dependent rRNA helicase SPB4 OS=Candida ... 92.8 3e-18 sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS=... 92.8 3e-18 sp|A3GGE9|DBP4_PICST ATP-dependent RNA helicase DBP4 OS=Scheffers... 93.2 3e-18 sp|Q4HZ68|DBP7_GIBZE ATP-dependent RNA helicase DBP7 OS=Gibberell... 92.8 4e-18 sp|Q6C835|DBP7_YARLI ATP-dependent RNA helicase DBP7 OS=Yarrowia ... 92.8 4e-18 sp|Q5ZBH5|RH25_ORYSJ DEAD-box ATP-dependent RNA helicase 25 OS=Or... 92.4 4e-18 sp|Q6FPT7|DBP4_CANGA ATP-dependent RNA helicase DBP4 OS=Candida g... 92.8 4e-18 sp|Q7S2N9|HAS1_NEUCR ATP-dependent RNA helicase has-1 OS=Neurospo... 92.0 5e-18 sp|Q6FIL3|HAS1_CANGA ATP-dependent RNA helicase HAS1 OS=Candida g... 91.3 5e-18 sp|Q6CXB7|HAS1_KLULA ATP-dependent RNA helicase HAS1 OS=Kluyverom... 91.3 6e-18 sp|A6ZPU3|DBP4_YEAS7 ATP-dependent RNA helicase DBP4 OS=Saccharom... 92.4 6e-18 sp|Q74Z73|HAS1_EREGS ATP-dependent RNA helicase HAS1 OS=Eremothec... 91.3 6e-18 sp|A5E2I8|SPB4_LODEL ATP-dependent rRNA helicase SPB4 OS=Lodderom... 91.7 6e-18 sp|P20448|DBP4_YEAST ATP-dependent RNA helicase HCA4 OS=Saccharom... 92.0 6e-18 sp|Q6CKZ4|DBP6_KLULA ATP-dependent RNA helicase DBP6 OS=Kluyverom... 91.7 7e-18 sp|Q9UTP9|DBP4_SCHPO ATP-dependent RNA helicase dbp4 OS=Schizosac... 91.7 8e-18 sp|Q2GV49|SPB4_CHAGB ATP-dependent rRNA helicase SPB4 OS=Chaetomi... 91.3 9e-18 sp|Q9DGP9|DDX25_XENLA ATP-dependent RNA helicase DDX25 OS=Xenopus... 90.5 1e-17 sp|Q4IAS1|DBP4_GIBZE ATP-dependent RNA helicase DBP4 OS=Gibberell... 91.3 1e-17 sp|Q75C76|DBP4_EREGS ATP-dependent RNA helicase DBP4 OS=Eremothec... 91.3 1e-17 sp|Q0JL73|RH26_ORYSJ DEAD-box ATP-dependent RNA helicase 26 OS=Or... 90.5 1e-17 sp|A7TJS7|SPB4_VANPO ATP-dependent rRNA helicase SPB4 OS=Vanderwa... 90.9 1e-17 sp|Q8NHQ9|DDX55_HUMAN ATP-dependent RNA helicase DDX55 OS=Homo sa... 90.5 1e-17 sp|Q4WV71|DBP7_ASPFU ATP-dependent RNA helicase dbp7 OS=Aspergill... 90.9 2e-17 sp|Q757I6|MAK5_EREGS ATP-dependent RNA helicase MAK5 OS=Eremothec... 90.9 2e-17 sp|P25808|SPB4_YEAST ATP-dependent rRNA helicase SPB4 OS=Saccharo... 90.5 2e-17 sp|A7A237|SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 OS=Saccharo... 90.5 2e-17 sp|P15424|MS116_YEAST ATP-dependent RNA helicase MSS116, mitochon... 90.5 2e-17 sp|Q6FKS8|SPB4_CANGA ATP-dependent rRNA helicase SPB4 OS=Candida ... 90.1 2e-17 sp|Q5AF95|DBP4_CANAL ATP-dependent RNA helicase DBP4 OS=Candida a... 90.5 2e-17 sp|Q750F8|SPB4_EREGS ATP-dependent rRNA helicase SPB4 OS=Eremothe... 90.1 2e-17 sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 O... 89.7 2e-17 sp|Q0UG00|MS116_PHANO ATP-dependent RNA helicase MSS116, mitochon... 89.4 3e-17 sp|Q2GZU7|DBP7_CHAGB ATP-dependent RNA helicase DBP7 OS=Chaetomiu... 90.1 3e-17 sp|Q8SR01|DBP4_ENCCU ATP-dependent RNA helicase DBP4 OS=Encephali... 88.6 3e-17 sp|Q03532|HAS1_YEAST ATP-dependent RNA helicase HAS1 OS=Saccharom... 89.0 3e-17 sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryomy... 89.4 3e-17 sp|Q6CK32|DBP7_KLULA ATP-dependent RNA helicase DBP7 OS=Kluyverom... 89.7 3e-17 sp|Q3SZ40|DDX56_BOVIN Probable ATP-dependent RNA helicase DDX56 O... 89.0 4e-17 sp|A5E2Z9|HAS1_LODEL ATP-dependent RNA helicase HAS1 OS=Lodderomy... 89.0 4e-17 sp|Q8SR49|SPB4_ENCCU ATP-dependent rRNA helicase SPB4 OS=Encephal... 88.2 4e-17 sp|A3LT90|MRH4_PICST ATP-dependent RNA helicase MRH4, mitochondri... 89.0 5e-17 sp|A2Q9T6|HAS1_ASPNC ATP-dependent RNA helicase has1 OS=Aspergill... 88.6 6e-17 sp|Q7S873|DBP7_NEUCR ATP-dependent RNA helicase dbp-7 OS=Neurospo... 89.0 6e-17 sp|Q9NUL7|DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28 O... 88.2 6e-17 sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida a... 88.2 7e-17 sp|Q6K7R9|RH48_ORYSJ DEAD-box ATP-dependent RNA helicase 48 OS=Or... 89.0 7e-17 sp|Q6BXG0|DBP4_DEBHA ATP-dependent RNA helicase DBP4 OS=Debaryomy... 88.6 8e-17 sp|Q9FNM7|RH26_ARATH DEAD-box ATP-dependent RNA helicase 26 OS=Ar... 88.6 8e-17 sp|Q6ZPL9|DDX55_MOUSE ATP-dependent RNA helicase DDX55 OS=Mus mus... 88.2 9e-17 sp|Q9FFQ1|RH31_ARATH DEAD-box ATP-dependent RNA helicase 31 OS=Ar... 88.2 1e-16 sp|A1DE84|DBP7_NEOFI ATP-dependent RNA helicase dbp7 OS=Neosartor... 88.2 1e-16 sp|Q6CRF4|DBP4_KLULA ATP-dependent RNA helicase DBP4 OS=Kluyverom... 88.2 1e-16 sp|Q2GMX1|HAS1_CHAGB ATP-dependent RNA helicase HAS1 OS=Chaetomiu... 87.8 1e-16 sp|Q0UR48|HAS1_PHANO ATP-dependent RNA helicase HAS1 OS=Phaeospha... 87.4 1e-16 sp|Q9FFT9|RH32_ARATH DEAD-box ATP-dependent RNA helicase 32 OS=Ar... 87.8 2e-16 sp|A5DIP0|DHH1_PICGU ATP-dependent RNA helicase DHH1 OS=Meyerozym... 87.0 2e-16 sp|Q0DBU5|RH31_ORYSJ DEAD-box ATP-dependent RNA helicase 31 OS=Or... 87.0 2e-16 sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida g... 87.0 2e-16 sp|Q1K8F7|CYT19_NEUCR ATP-dependent RNA helicase cyt-19, mitochon... 87.0 2e-16 sp|Q2UST1|MS116_ASPOR ATP-dependent RNA helicase mss116, mitochon... 87.0 2e-16 sp|Q6BJX6|DHH1_DEBHA ATP-dependent RNA helicase DHH1 OS=Debaryomy... 86.7 2e-16 sp|P34668|YO12_CAEEL Putative ATP-dependent RNA helicase ZK686.2 ... 86.7 2e-16 sp|Q0UMB6|DBP10_PHANO ATP-dependent RNA helicase DBP10 OS=Phaeosp... 87.0 2e-16 sp|A5E726|DBP6_LODEL ATP-dependent RNA helicase DBP6 OS=Lodderomy... 86.7 3e-16 sp|Q7FGZ2|RH1_ARATH DEAD-box ATP-dependent RNA helicase 1 OS=Arab... 86.3 3e-16 sp|A3LNR6|HAS1_PICST ATP-dependent RNA helicase HAS1 OS=Scheffers... 86.3 3e-16 sp|Q4R4T6|DDX28_MACFA Probable ATP-dependent RNA helicase DDX28 O... 85.9 4e-16 sp|Q9NY93|DDX56_HUMAN Probable ATP-dependent RNA helicase DDX56 O... 85.9 4e-16 sp|Q6CGD1|DBP4_YARLI ATP-dependent RNA helicase DBP4 OS=Yarrowia ... 86.3 5e-16 sp|A3GHW9|ROK1_PICST ATP-dependent RNA helicase ROK1 OS=Scheffers... 85.5 5e-16 sp|Q6IMY8|HNRPU_RAT Heterogeneous nuclear ribonucleoprotein U OS=... 85.5 7e-16 sp|Q5XPI3|RN123_MOUSE E3 ubiquitin-protein ligase RNF123 OS=Mus m... 85.9 7e-16 sp|Q5XPI4|RN123_HUMAN E3 ubiquitin-protein ligase RNF123 OS=Homo ... 85.9 7e-16 sp|Q9D0R4|DDX56_MOUSE Probable ATP-dependent RNA helicase DDX56 O... 84.7 8e-16 sp|Q8VEK3|HNRPU_MOUSE Heterogeneous nuclear ribonucleoprotein U O... 85.5 8e-16 sp|Q0DLB9|RH17_ORYSJ DEAD-box ATP-dependent RNA helicase 17 OS=Or... 84.7 1e-15 sp|A7ESL8|DBP4_SCLS1 ATP-dependent RNA helicase dbp4 OS=Sclerotin... 85.1 1e-15 sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Meyerozym... 84.3 1e-15 sp|A5DAR2|DBP7_PICGU ATP-dependent RNA helicase DBP7 OS=Meyerozym... 85.1 1e-15 sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U O... 84.7 1e-15 sp|Q6C193|SPB4_YARLI ATP-dependent rRNA helicase SPB4 OS=Yarrowia... 84.3 1e-15 sp|A0KEG9|RHLB_AERHH ATP-dependent RNA helicase RhlB OS=Aeromonas... 83.2 1e-15 sp|Q54EC2|DDX55_DICDI Probable ATP-dependent RNA helicase ddx55 O... 84.0 2e-15 sp|D3ZXK7|RN123_RAT E3 ubiquitin-protein ligase RNF123 OS=Rattus ... 84.3 2e-15 sp|Q873H9|SPB4_NEUCR ATP-dependent rRNA helicase spb-4 OS=Neurosp... 83.6 2e-15 sp|A4STJ7|RHLB_AERS4 ATP-dependent RNA helicase RhlB OS=Aeromonas... 82.0 3e-15 sp|A1CIQ5|HAS1_ASPCL ATP-dependent RNA helicase has1 OS=Aspergill... 82.8 4e-15 sp|Q5AZY1|MRH4_EMENI ATP-dependent RNA helicase mrh4, mitochondri... 82.8 4e-15 sp|Q0CF43|DBP7_ASPTN ATP-dependent RNA helicase dbp7 OS=Aspergill... 83.2 4e-15 sp|O74764|SPB4_SCHPO ATP-dependent rRNA helicase spb4 OS=Schizosa... 82.4 5e-15 sp|Q94C75|RH25_ARATH DEAD-box ATP-dependent RNA helicase 25 OS=Ar... 82.4 5e-15 sp|A0A5F9C6I2|RN123_RABIT E3 ubiquitin-protein ligase RNF123 OS=O... 83.2 6e-15 sp|A1CB55|DBP7_ASPCL ATP-dependent RNA helicase dbp7 OS=Aspergill... 82.4 6e-15 sp|Q5BBY1|HAS1_EMENI ATP-dependent RNA helicase has1 OS=Emericell... 82.4 6e-15 sp|Q5AAW3|DHH1_CANAL ATP-dependent RNA helicase DHH1 OS=Candida a... 82.0 6e-15 sp|A7TNT1|DBP7_VANPO ATP-dependent RNA helicase DBP7 OS=Vanderwal... 82.4 7e-15 sp|Q9SW44|RH16_ARATH DEAD-box ATP-dependent RNA helicase 16 OS=Ar... 81.3 1e-14 sp|Q6C3J3|MRH4_YARLI ATP-dependent RNA helicase MRH4, mitochondri... 80.5 2e-14 sp|Q2TZH2|MRH4_ASPOR ATP-dependent RNA helicase mrh4, mitochondri... 80.9 2e-14 sp|Q5UQD1|YR458_MIMIV Putative ATP-dependent RNA helicase R458 OS... 80.1 2e-14 sp|Q9SF41|RH45_ARATH DEAD-box ATP-dependent RNA helicase 45 OS=Ar... 80.5 3e-14 sp|P38112|MAK5_YEAST ATP-dependent RNA helicase MAK5 OS=Saccharom... 80.1 3e-14 sp|Q6C0X2|DHH1_YARLI ATP-dependent RNA helicase DHH1 OS=Yarrowia ... 79.3 4e-14 sp|Q6ATJ8|RH16_ORYSJ DEAD-box ATP-dependent RNA helicase 16 OS=Or... 79.7 4e-14 sp|Q7XJN0|RH17_ARATH DEAD-box ATP-dependent RNA helicase 17 OS=Ar... 79.3 5e-14 sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwal... 79.0 6e-14 sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharom... 78.6 7e-14 sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharom... 78.6 9e-14 sp|A6ZL85|MAK5_YEAS7 ATP-dependent RNA helicase MAK5 OS=Saccharom... 79.0 9e-14 sp|Q6CTN7|MAK5_KLULA ATP-dependent RNA helicase MAK5 OS=Kluyverom... 79.0 1e-13 sp|Q10RI7|RH38_ORYSJ DEAD-box ATP-dependent RNA helicase 38 OS=Or... 77.4 1e-13 sp|Q0E2Q3|IF4A2_ORYSJ Putative eukaryotic initiation factor 4A-2 ... 77.0 1e-13 sp|Q7SBR1|MRH4_NEUCR ATP-dependent RNA helicase mrh4, mitochondri... 77.8 2e-13 sp|Q66HG7|DDX59_RAT Probable ATP-dependent RNA helicase DDX59 OS=... 77.4 2e-13 sp|Q9SIZ8|RKP_ARATH E3 ubiquitin-protein ligase RKP OS=Arabidopsi... 78.2 2e-13 sp|Q9C8S9|RH48_ARATH Probable DEAD-box ATP-dependent RNA helicase... 77.4 3e-13 sp|A1DGF2|MRH4_NEOFI ATP-dependent RNA helicase mrh4, mitochondri... 76.6 3e-13 sp|Q6FST5|DBP6_CANGA ATP-dependent RNA helicase DBP6 OS=Candida g... 75.9 6e-13 sp|A6R918|SPB4_AJECN ATP-dependent rRNA helicase SPB4 OS=Ajellomy... 75.9 8e-13 sp|A5DC85|DBP9_PICGU ATP-dependent RNA helicase DBP9 OS=Meyerozym... 75.1 1e-12 sp|Q4IJ56|DBP9_GIBZE ATP-dependent RNA helicase DBP9 OS=Gibberell... 75.1 1e-12 sp|Q06218|DBP9_YEAST ATP-dependent RNA helicase DBP9 OS=Saccharom... 74.7 2e-12 sp|A7A1G0|DBP9_YEAS7 ATP-dependent RNA helicase DBP9 OS=Saccharom... 74.7 2e-12 sp|A2YV85|RH29_ORYSI DEAD-box ATP-dependent RNA helicase 29 OS=Or... 74.3 3e-12 sp|Q4X1X0|MRH4_ASPFU ATP-dependent RNA helicase mrh4, mitochondri... 73.9 3e-12 sp|A7E436|DBP8_SCLS1 ATP-dependent RNA helicase dbp8 OS=Sclerotin... 73.6 3e-12 sp|A5DR68|MRH4_PICGU ATP-dependent RNA helicase MRH4, mitochondri... 73.6 3e-12 sp|A3BT52|RH29_ORYSJ DEAD-box ATP-dependent RNA helicase 29 OS=Or... 73.9 3e-12 sp|Q9PA24|RHLB_XYLFA ATP-dependent RNA helicase RhlB OS=Xylella f... 73.2 3e-12 sp|Q8N8A6|DDX51_HUMAN ATP-dependent RNA helicase DDX51 OS=Homo sa... 73.6 4e-12 sp|A5DEZ5|MS116_PICGU ATP-dependent RNA helicase MSS116, mitochon... 73.6 4e-12 sp|A1CSR1|MRH4_ASPCL ATP-dependent RNA helicase mrh4, mitochondri... 73.2 5e-12 sp|Q2UBZ5|SPB4_ASPOR ATP-dependent rRNA helicase spb4 OS=Aspergil... 72.8 6e-12 sp|Q1E7Y4|MAK5_COCIM ATP-dependent RNA helicase MAK5 OS=Coccidioi... 72.8 6e-12 sp|A4R8G3|DBP8_PYRO7 ATP-dependent RNA helicase DBP8 OS=Pyricular... 72.4 6e-12 sp|Q2UQW3|ROK1_ASPOR ATP-dependent RNA helicase rok1 OS=Aspergill... 72.4 9e-12 sp|Q6CEB8|DRS1_YARLI ATP-dependent RNA helicase DRS1 OS=Yarrowia ... 72.4 9e-12 sp|Q75F95|DRS1_EREGS ATP-dependent RNA helicase DRS1 OS=Eremothec... 72.0 1e-11 sp|A1CNK1|ROK1_ASPCL ATP-dependent RNA helicase rok1 OS=Aspergill... 72.0 1e-11 sp|P0CQ91|MAK5_CRYNB ATP-dependent RNA helicase MAK5 OS=Cryptococ... 72.0 1e-11 sp|P0CQ90|MAK5_CRYNJ ATP-dependent RNA helicase MAK5 OS=Cryptococ... 72.0 1e-11 sp|O80792|RH33_ARATH Putative DEAD-box ATP-dependent RNA helicase... 72.0 1e-11 sp|A1D1E3|ROK1_NEOFI ATP-dependent RNA helicase rok1 OS=Neosartor... 72.0 1e-11 sp|Q4WRH5|ROK1_ASPFU ATP-dependent RNA helicase rok1 OS=Aspergill... 71.6 2e-11 sp|Q54TD7|DDX24_DICDI ATP-dependent RNA helicase ddx24 OS=Dictyos... 71.6 2e-11 sp|A2QAB5|ROK1_ASPNC ATP-dependent RNA helicase rok1 OS=Aspergill... 71.2 2e-11 sp|P53166|MRH4_YEAST ATP-dependent RNA helicase MRH4, mitochondri... 70.9 2e-11 sp|A6ZUB2|MRH4_YEAS7 ATP-dependent RNA helicase MRH4, mitochondri... 70.9 2e-11 sp|Q0CQF3|SPB4_ASPTN ATP-dependent rRNA helicase spb4 OS=Aspergil... 71.2 2e-11 sp|P0C2N7|DRS1_CHAGB ATP-dependent RNA helicase DRS1 OS=Chaetomiu... 71.2 2e-11 sp|P52271|Y308_MYCGE Probable ATP-dependent RNA helicase MG308 OS... 70.1 3e-11 sp|Q2UMY7|MAK5_ASPOR ATP-dependent RNA helicase mak5 OS=Aspergill... 70.5 3e-11 sp|Q5BET6|ROK1_EMENI ATP-dependent RNA helicase rok1 OS=Emericell... 70.5 3e-11 sp|Q7S6F3|DBP9_NEUCR ATP-dependent RNA helicase dbp-9 OS=Neurospo... 70.5 3e-11 sp|A2QE29|SPB4_ASPNC ATP-dependent rRNA helicase spb4 OS=Aspergil... 70.1 4e-11 sp|Q5ANB2|DBP10_CANAL ATP-dependent RNA helicase DBP10 OS=Candida... 70.5 4e-11 sp|Q54CD6|DDX5_DICDI Probable ATP-dependent RNA helicase ddx5 OS=... 70.1 5e-11 sp|Q6NZQ2|DDX31_MOUSE Probable ATP-dependent RNA helicase DDX31 O... 70.1 5e-11 sp|Q0CMB0|ROK1_ASPTN ATP-dependent RNA helicase rok1 OS=Aspergill... 70.1 5e-11 sp|Q54BD6|DDX51_DICDI Probable ATP-dependent RNA helicase ddx51 O... 69.3 6e-11 sp|Q0U6X2|MAK5_PHANO ATP-dependent RNA helicase MAK5 OS=Phaeospha... 69.7 6e-11 sp|Q0U397|MRH4_PHANO ATP-dependent RNA helicase MRH4, mitochondri... 69.7 6e-11 sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Meyeroz... 69.7 7e-11 sp|Q1E306|ROK1_COCIM ATP-dependent RNA helicase ROK1 OS=Coccidioi... 69.3 7e-11 sp|Q4IPI1|ROK1_GIBZE ATP-dependent RNA helicase ROK1 OS=Gibberell... 69.3 8e-11 sp|P0CR04|ROK1_CRYNJ ATP-dependent RNA helicase ROK1 OS=Cryptococ... 68.6 1e-10 sp|P0CR05|ROK1_CRYNB ATP-dependent RNA helicase ROK1 OS=Cryptococ... 68.6 1e-10 sp|A7F2S3|SPB4_SCLS1 ATP-dependent rRNA helicase spb4 OS=Scleroti... 68.6 1e-10 sp|Q1E9B7|MRH4_COCIM ATP-dependent RNA helicase MRH4, mitochondri... 68.2 2e-10 sp|Q0CZS8|HAS1_ASPTN ATP-dependent RNA helicase has1 OS=Aspergill... 68.2 2e-10 sp|A6RMZ2|SPB4_BOTFB ATP-dependent rRNA helicase spb4 OS=Botryoti... 67.8 2e-10 sp|Q6BKH3|DBP7_DEBHA ATP-dependent RNA helicase DBP7 OS=Debaryomy... 67.8 2e-10 sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderomy... 67.4 2e-10 sp|A4QX49|DBP7_PYRO7 ATP-dependent RNA helicase DBP7 OS=Pyricular... 67.4 3e-10 sp|P0CR03|DBP8_CRYNB ATP-dependent RNA helicase DBP8 OS=Cryptococ... 67.4 3e-10 sp|P0CR02|DBP8_CRYNJ ATP-dependent RNA helicase DBP8 OS=Cryptococ... 67.0 3e-10 sp|O74393|MAK5_SCHPO ATP-dependent RNA helicase mak5 OS=Schizosac... 67.0 3e-10 sp|Q0UP45|SPB4_PHANO ATP-dependent rRNA helicase SPB4 OS=Phaeosph... 67.0 4e-10 sp|Q5AZA6|DBP9_EMENI ATP-dependent RNA helicase dbp9 OS=Emericell... 66.6 5e-10 sp|Q59S59|MRH4_CANAL ATP-dependent RNA helicase MRH4, mitochondri... 66.2 6e-10 sp|A6RSH5|DBP7_BOTFB ATP-dependent RNA helicase dbp7 OS=Botryotin... 66.6 6e-10 sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Or... 65.9 7e-10 sp|P47664|Y425_MYCGE Probable ATP-dependent RNA helicase MG425 OS... 65.9 7e-10 sp|Q0CY48|DBP9_ASPTN ATP-dependent RNA helicase dbp9 OS=Aspergill... 66.2 7e-10 sp|Q2HCV7|ROK1_CHAGB ATP-dependent RNA helicase ROK1 OS=Chaetomiu... 66.2 7e-10 sp|A4RMV8|ROK1_PYRO7 ATP-dependent RNA helicase ROK1 OS=Pyricular... 66.2 7e-10 sp|A2QA23|DBP6_ASPNC ATP-dependent RNA helicase dbp6 OS=Aspergill... 65.9 9e-10 sp|P0CQ84|HAS1_CRYNJ ATP-dependent RNA helicase HAS1 OS=Cryptococ... 65.9 9e-10 sp|P0CQ85|HAS1_CRYNB ATP-dependent RNA helicase HAS1 OS=Cryptococ... 65.9 9e-10 sp|O13622|MS116_SCHPO ATP-dependent RNA helicase mss116, mitochon... 65.5 1e-09 sp|Q8GXD6|RH49_ARATH DEAD-box ATP-dependent RNA helicase 49 OS=Ar... 65.5 1e-09 sp|Q6CUI6|DBP9_KLULA ATP-dependent RNA helicase DBP9 OS=Kluyverom... 65.5 1e-09 sp|Q2UFL0|DBP9_ASPOR ATP-dependent RNA helicase dbp9 OS=Aspergill... 65.1 1e-09 sp|Q6H601|RH22_ORYSJ DEAD-box ATP-dependent RNA helicase 22 OS=Or... 65.1 1e-09 sp|A6SNX1|DBP9_BOTFB ATP-dependent RNA helicase dbp9 OS=Botryotin... 65.1 1e-09 sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia ... 65.1 2e-09 sp|P26802|DDX51_DROME Probable ATP-dependent RNA helicase Dbp73D ... 65.1 2e-09 sp|Q4X0C2|DBP9_ASPFU ATP-dependent RNA helicase dbp9 OS=Aspergill... 64.7 2e-09 sp|P0CR08|SPB4_CRYNJ ATP-dependent rRNA helicase SPB4 OS=Cryptoco... 64.7 2e-09 sp|P0CR09|SPB4_CRYNB ATP-dependent rRNA helicase SPB4 OS=Cryptoco... 64.7 2e-09 sp|Q4HVW2|SPB4_GIBZE ATP-dependent rRNA helicase SPB4 OS=Gibberel... 64.3 2e-09 sp|Q7SFC8|ROK1_NEUCR ATP-dependent RNA helicase rok1 OS=Neurospor... 64.7 2e-09 sp|A1DHV3|DBP9_NEOFI ATP-dependent RNA helicase dbp9 OS=Neosartor... 64.3 2e-09 sp|Q75AE1|ROK1_EREGS ATP-dependent RNA helicase ROK1 OS=Eremothec... 64.3 3e-09 sp|A6R2L6|DBP9_AJECN ATP-dependent RNA helicase DBP9 OS=Ajellomyc... 64.3 3e-09 sp|Q8TFL3|DBP7_CANGA ATP-dependent RNA helicase DBP7 OS=Candida g... 63.9 3e-09 sp|Q54VF1|DDX56_DICDI Probable ATP-dependent RNA helicase ddx56 O... 63.9 3e-09 sp|O60080|DBP9_SCHPO ATP-dependent RNA helicase dbp9 OS=Schizosac... 63.9 3e-09 sp|Q6BLM5|DBP9_DEBHA ATP-dependent RNA helicase DBP9 OS=Debaryomy... 63.5 4e-09 sp|Q09916|HAS1_SCHPO ATP-dependent RNA helicase has1 OS=Schizosac... 63.5 4e-09 sp|A7EM78|DBP9_SCLS1 ATP-dependent RNA helicase dbp9 OS=Sclerotin... 63.5 4e-09 sp|A2QCW6|DBP9_ASPNC ATP-dependent RNA helicase dbp9 OS=Aspergill... 63.5 4e-09 sp|Q5BGX6|DBP7_EMENI ATP-dependent RNA helicase dbp7 OS=Emericell... 63.9 4e-09 sp|Q754J2|DBP7_EREGS ATP-dependent RNA helicase DBP7 OS=Eremothec... 63.5 4e-09 sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyverom... 63.5 5e-09 sp|A1C7F7|DBP9_ASPCL ATP-dependent RNA helicase dbp9 OS=Aspergill... 63.2 5e-09 sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Meyerozym... 63.2 5e-09 sp|Q6BH93|HAS1_DEBHA ATP-dependent RNA helicase HAS1 OS=Debaryomy... 63.2 5e-09 sp|A5E5F7|MRH4_LODEL ATP-dependent RNA helicase MRH4, mitochondri... 63.2 5e-09 sp|Q8K363|DDX18_MOUSE ATP-dependent RNA helicase DDX18 OS=Mus mus... 63.2 6e-09 sp|Q4IBS2|MAK5_GIBZE ATP-dependent RNA helicase MAK5 OS=Gibberell... 63.2 7e-09 sp|A7TPC9|DBP9_VANPO ATP-dependent RNA helicase DBP9 OS=Vanderwal... 62.8 8e-09 sp|Q1DWF4|DBP9_COCIM ATP-dependent RNA helicase DBP9 OS=Coccidioi... 62.4 9e-09 sp|Q9NVP1|DDX18_HUMAN ATP-dependent RNA helicase DDX18 OS=Homo sa... 62.8 9e-09 sp|Q59ZH9|MAK5_CANAL ATP-dependent RNA helicase MAK5 OS=Candida a... 62.8 9e-09 sp|Q5AK59|HAS1_CANAL ATP-dependent RNA helicase HAS1 OS=Candida a... 62.4 1e-08 sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidioi... 62.0 1e-08 sp|Q4P6N0|HAS1_USTMA ATP-dependent RNA helicase HAS1 OS=Ustilago ... 62.0 1e-08 sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberell... 62.0 1e-08 sp|Q4WQM4|HAS1_ASPFU ATP-dependent RNA helicase has1 OS=Aspergill... 62.0 1e-08 sp|Q0UHM7|DBP7_PHANO ATP-dependent RNA helicase DBP7 OS=Phaeospha... 62.0 1e-08 sp|A1CW14|HAS1_NEOFI ATP-dependent RNA helicase has1 OS=Neosartor... 62.0 1e-08 sp|Q6BV58|MAK5_DEBHA ATP-dependent RNA helicase MAK5 OS=Debaryomy... 62.0 1e-08 sp|Q6BV94|MRH4_DEBHA ATP-dependent RNA helicase MRH4, mitochondri... 61.2 2e-08 sp|Q2UE66|DBP7_ASPOR ATP-dependent RNA helicase dbp7 OS=Aspergill... 61.6 2e-08 sp|Q0UZ59|DBP9_PHANO ATP-dependent RNA helicase DBP9 OS=Phaeospha... 61.2 2e-08 sp|Q751D1|DBP6_EREGS ATP-dependent RNA helicase DBP6 OS=Eremothec... 60.8 3e-08 sp|A5DPU0|MAK5_PICGU ATP-dependent RNA helicase MAK5 OS=Meyerozym... 61.2 3e-08 sp|A4QTR1|DBP9_PYRO7 ATP-dependent RNA helicase DBP9 OS=Pyricular... 60.8 3e-08 sp|Q9LIH9|RH51_ARATH DEAD-box ATP-dependent RNA helicase 51 OS=Ar... 60.8 3e-08 sp|A6ZSB3|DBP6_YEAS7 ATP-dependent RNA helicase DBP6 OS=Saccharom... 60.8 3e-08 sp|P53734|DBP6_YEAST ATP-dependent RNA helicase DBP6 OS=Saccharom... 60.8 3e-08 sp|A3LV40|DBP9_PICST ATP-dependent RNA helicase DBP9 OS=Scheffers... 60.5 4e-08 sp|P75335|Y443_MYCPN Probable ATP-dependent RNA helicase MG308 ho... 59.7 5e-08 sp|Q4P9E5|SPB4_USTMA ATP-dependent rRNA helicase SPB4 OS=Ustilago... 60.5 5e-08 sp|A2RA55|DBP7_ASPNC ATP-dependent RNA helicase dbp7 OS=Aspergill... 60.1 5e-08 sp|Q0DWT8|RH1_ORYSJ DEAD-box ATP-dependent RNA helicase 1 OS=Oryz... 59.7 6e-08 sp|A6RCJ9|MRH4_AJECN ATP-dependent RNA helicase MRH4, mitochondri... 60.1 6e-08 sp|Q944S1|RH22_ARATH DEAD-box ATP-dependent RNA helicase 22 OS=Ar... 59.7 6e-08 sp|Q9VD51|DDX18_DROME Probable ATP-dependent RNA helicase pitchou... 59.7 7e-08 sp|A3GG51|MAK5_PICST ATP-dependent RNA helicase MAK5 OS=Scheffers... 59.7 7e-08 sp|Q6CN92|SPB4_KLULA ATP-dependent rRNA helicase SPB4 OS=Kluyvero... 58.9 1e-07 sp|Q0JFN7|RH58_ORYSJ DEAD-box ATP-dependent RNA helicase 58, chlo... 58.5 1e-07 sp|Q7RZH4|MAK5_NEUCR ATP-dependent RNA helicase mak-5 OS=Neurospo... 58.9 1e-07 sp|B0LPN4|RYR2_RAT Ryanodine receptor 2 OS=Rattus norvegicus OX=1... 58.5 2e-07 sp|Q61R02|DDX55_CAEBR Probable ATP-dependent RNA helicase DDX55 h... 58.2 2e-07 sp|P73421|RECQ_SYNY3 ATP-dependent DNA helicase RecQ OS=Synechocy... 57.8 2e-07 sp|Q3E9C3|RH58_ARATH DEAD-box ATP-dependent RNA helicase 58, chlo... 57.4 3e-07 sp|A5DUB2|MAK5_LODEL ATP-dependent RNA helicase MAK5 OS=Lodderomy... 57.8 3e-07 sp|E9Q401|RYR2_MOUSE Ryanodine receptor 2 OS=Mus musculus OX=1009... 57.8 4e-07 sp|P30957|RYR2_RABIT Ryanodine receptor 2 OS=Oryctolagus cuniculu... 57.4 5e-07 sp|Q6FUA6|DBP9_CANGA ATP-dependent RNA helicase DBP9 OS=Candida g... 57.0 5e-07 sp|Q5A4P9|DBP9_CANAL ATP-dependent RNA helicase DBP9 OS=Candida a... 56.6 7e-07 sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens OX=9606... 57.0 7e-07 sp|A7EWH6|MRH4_SCLS1 ATP-dependent RNA helicase mrh4, mitochondri... 56.2 7e-07 sp|Q4Z8K6|RBP9X_DROME Ran-binding proteins 9/10 homolog OS=Drosop... 56.6 8e-07 sp|Q9FVV4|RH55_ARATH DEAD-box ATP-dependent RNA helicase 55 OS=Ar... 55.8 8e-07 sp|Q4P7M1|DBP9_USTMA ATP-dependent RNA helicase DBP9 OS=Ustilago ... 56.2 9e-07 sp|P0CT33|TLH1_SCHPO ATP-dependent DNA helicase tlh1 (Fragment) O... 56.2 1e-06 sp|Q1RKN3|TLH2_SCHPO ATP-dependent DNA helicase tlh2 OS=Schizosac... 56.2 1e-06 sp|P36120|DBP7_YEAST ATP-dependent RNA helicase DBP7 OS=Saccharom... 55.8 1e-06 sp|Q54CH6|IF4AX_DICDI Putative eukaryotic initiation factor 4A-li... 53.9 1e-06 sp|A6ZZY8|DBP7_YEAS7 ATP-dependent RNA helicase DBP7 OS=Saccharom... 55.8 1e-06 sp|A5E572|DBP9_LODEL ATP-dependent RNA helicase DBP9 OS=Lodderomy... 55.5 1e-06 sp|P34640|DDX55_CAEEL Probable ATP-dependent RNA helicase DDX55 h... 55.5 1e-06 sp|A4QTC6|MRH4_PYRO7 ATP-dependent RNA helicase MRH4, mitochondri... 55.5 2e-06 sp|Q869P0|DDX31_DICDI Probable ATP-dependent RNA helicase ddx31 O... 55.1 2e-06 sp|Q4WYJ7|SPB4_ASPFU ATP-dependent rRNA helicase spb4 OS=Aspergil... 54.7 3e-06 sp|A1D699|SPB4_NEOFI ATP-dependent rRNA helicase spb4 OS=Neosarto... 54.7 3e-06 sp|A2QZ71|MRH4_ASPNC ATP-dependent RNA helicase mrh4, mitochondri... 53.9 4e-06 sp|A7TE77|MRH4_VANPO ATP-dependent RNA helicase MRH4, mitochondri... 53.5 5e-06 sp|P0CQ94|DBP7_CRYNJ ATP-dependent RNA helicase DBP7 OS=Cryptococ... 53.5 6e-06 sp|P0CQ95|DBP7_CRYNB ATP-dependent RNA helicase DBP7 OS=Cryptococ... 53.5 6e-06 sp|Q5B8F4|SPB4_EMENI ATP-dependent rRNA helicase spb4 OS=Emericel... 53.5 6e-06 sp|Q8IBN8|DDX31_PLAF7 ATP-dependent DNA helicase DDX31 OS=Plasmod... 53.5 7e-06 sp|P0CR10|DBP9_CRYNJ ATP-dependent RNA helicase DBP9 OS=Cryptococ... 53.1 8e-06 sp|P0CR11|DBP9_CRYNB ATP-dependent RNA helicase DBP9 OS=Cryptococ... 53.1 8e-06 sp|Q74ZC1|DBP9_EREGS ATP-dependent RNA helicase DBP9 OS=Eremothec... 53.1 8e-06 sp|A1CTL8|MAK5_ASPCL ATP-dependent RNA helicase mak5 OS=Aspergill... 53.1 9e-06 sp|Q6CWQ5|MRH4_KLULA ATP-dependent RNA helicase MRH4, mitochondri... 52.8 1e-05 sp|Q1E1R7|SPB4_COCIM ATP-dependent rRNA helicase SPB4 OS=Coccidio... 52.8 1e-05 sp|Q755C5|MRH4_EREGS ATP-dependent RNA helicase MRH4, mitochondri... 51.6 2e-05 sp|Q5R881|RSPRY_PONAB RING finger and SPRY domain-containing prot... 51.6 2e-05 sp|Q95LP3|RSPRY_MACFA RING finger and SPRY domain-containing prot... 51.2 2e-05 sp|Q96DX4|RSPRY_HUMAN RING finger and SPRY domain-containing prot... 51.2 2e-05 sp|Q8BVR6|RSPRY_MOUSE RING finger and SPRY domain-containing prot... 51.2 3e-05 sp|Q4P0Y5|DBP7_USTMA ATP-dependent RNA helicase DBP7 OS=Ustilago ... 51.6 3e-05 sp|A1CL59|SPB4_ASPCL ATP-dependent rRNA helicase spb4 OS=Aspergil... 50.4 5e-05 sp|Q9W3Y5|Y4443_DROME Putative ATP-dependent RNA helicase CG14443... 50.1 7e-05 sp|Q9C8J7|TRO_ARATH Protein TRAUCO OS=Arabidopsis thaliana OX=370... 49.7 8e-05 sp|O13983|HRQ1_SCHPO ATP-dependent helicase hrq1 OS=Schizosacchar... 49.7 1e-04 sp|Q8L840|RQL4A_ARATH ATP-dependent DNA helicase Q-like 4A OS=Ara... 49.3 1e-04 sp|Q24498|RYR_DROME Ryanodine receptor OS=Drosophila melanogaster... 49.7 1e-04 sp|Q9PTY5|RANB9_XENLA Ran-binding protein 9 OS=Xenopus laevis OX=... 48.9 2e-04 sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio OX=79... 48.1 2e-04 sp|Q28FM1|RANB9_XENTR Ran-binding protein 9 OS=Xenopus tropicalis... 48.1 3e-04 sp|A1L252|RANB9_DANRE Ran-binding protein 9 OS=Danio rerio OX=795... 48.1 3e-04 sp|Q6VN19|RBP10_MOUSE Ran-binding protein 10 OS=Mus musculus OX=1... 47.8 3e-04 sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens OX=96... 47.8 3e-04 sp|P69566|RANB9_MOUSE Ran-binding protein 9 OS=Mus musculus OX=10... 47.8 3e-04 sp|Q6VN20|RBP10_HUMAN Ran-binding protein 10 OS=Homo sapiens OX=9... 47.8 3e-04 sp|A3KMV8|RBP10_BOVIN Ran-binding protein 10 OS=Bos taurus OX=991... 47.8 3e-04 sp|O34748|RECQ_BACSU ATP-dependent DNA helicase RecQ OS=Bacillus ... 47.4 5e-04 sp|O94712|YC5C_SCHPO Uncharacterized protein C1259.12c OS=Schizos... 46.6 8e-04 sp|A8WK63|RECQ1_CAEBR Putative ATP-dependent DNA helicase Q1 OS=C... 46.6 8e-04 sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cuniculu... 46.6 0.001 sp|P16960|RYR1_PIG Ryanodine receptor 1 OS=Sus scrofa OX=9823 GN=... 46.6 0.001 sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens OX=9606... 46.2 0.001 sp|A7EQ00|SSH4_SCLS1 Protein ssh4 OS=Sclerotinia sclerotiorum (st... 45.8 0.001 sp|E9PZQ0|RYR1_MOUSE Ryanodine receptor 1 OS=Mus musculus OX=1009... 46.2 0.001 sp|Q75NR7|RECQ4_MOUSE ATP-dependent DNA helicase Q4 OS=Mus muscul... 46.2 0.001 sp|O88700|BLM_MOUSE RecQ-like DNA helicase BLM OS=Mus musculus OX... 45.8 0.002 sp|A6S3E0|SSH4_BOTFB Protein ssh4 OS=Botryotinia fuckeliana (stra... 45.4 0.002 sp|A2AGL3|RYR3_MOUSE Ryanodine receptor 3 OS=Mus musculus OX=1009... 45.8 0.002 sp|Q1E2D2|SSH4_COCIM Protein SSH4 OS=Coccidioides immitis (strain... 45.1 0.002 sp|O88838|SPSB2_MOUSE SPRY domain-containing SOCS box protein 2 O... 43.9 0.003 sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens OX=9606... 45.1 0.003 sp|Q5M877|SPSB2_RAT SPRY domain-containing SOCS box protein 2 OS=... 43.5 0.004 sp|Q5M9B1|SPSB3_XENLA SPRY domain-containing SOCS box protein 3 O... 43.9 0.004 sp|Q9TXJ8|RECQ1_CAEEL Putative ATP-dependent DNA helicase Q1 OS=C... 44.3 0.005 sp|A1CNW8|SSH4_ASPCL Protein ssh4 OS=Aspergillus clavatus (strain... 43.9 0.005 sp|P54132|BLM_HUMAN RecQ-like DNA helicase BLM OS=Homo sapiens OX... 44.3 0.005 sp|F4JFJ3|Y3206_ARATH ATP-dependent DNA helicase At3g02060, chlor... 43.5 0.007 sp|Q9DEY9|BLM_XENLA RecQ-like DNA helicase BLM OS=Xenopus laevis ... 43.9 0.007 sp|Q28DT9|SPSB3_XENTR SPRY domain-containing SOCS box protein 3 O... 42.7 0.008 sp|Q05549|HRQ1_YEAST ATP-dependent helicase HRQ1 OS=Saccharomyces... 43.5 0.009 sp|G5EFZ3|ASH2_CAEEL Set1/Ash2 histone methyltransferase complex ... 43.1 0.009 sp|Q9FT70|RQL4B_ARATH ATP-dependent DNA helicase Q-like 4B OS=Ara... 43.5 0.009 sp|Q0WVW7|RQL5_ARATH ATP-dependent DNA helicase Q-like 5 OS=Arabi... 42.7 0.012 sp|Q99619|SPSB2_HUMAN SPRY domain-containing SOCS box protein 2 O... 41.6 0.014 sp|F4INA9|RECG_ARATH ATP-dependent DNA helicase homolog RECG, chl... 42.7 0.015 sp|Q6FJJ8|MRH4_CANGA ATP-dependent RNA helicase MRH4, mitochondri... 42.4 0.015 sp|O94761|RECQ4_HUMAN ATP-dependent DNA helicase Q4 OS=Homo sapie... 42.7 0.016 sp|P15043|RECQ_ECOLI ATP-dependent DNA helicase RecQ OS=Escherich... 42.0 0.021 sp|Q9I920|BLM_CHICK RecQ-like DNA helicase BLM OS=Gallus gallus O... 42.0 0.021 sp|Q5N870|DCL3A_ORYSJ Endoribonuclease Dicer homolog 3a OS=Oryza ... 42.0 0.028 sp|Q96A44|SPSB4_HUMAN SPRY domain-containing SOCS box protein 4 O... 40.8 0.031 sp|Q9TS33|RYR3_RABIT Ryanodine receptor 3 OS=Oryctolagus cuniculu... 41.6 0.037 sp|Q2VPA6|HELQ_MOUSE Helicase POLQ-like OS=Mus musculus OX=10090 ... 41.2 0.038 sp|Q9BQ75|CMS1_HUMAN Protein CMSS1 OS=Homo sapiens OX=9606 GN=CMS... 40.4 0.042 sp|Q9CL21|RECQ_PASMU ATP-dependent DNA helicase RecQ OS=Pasteurel... 41.2 0.042 sp|Q8R5F7|IFIH1_MOUSE Interferon-induced helicase C domain-contai... 40.8 0.047 sp|Q9BYX4|IFIH1_HUMAN Interferon-induced helicase C domain-contai... 40.8 0.055 sp|Q8R5B6|SPSB4_MOUSE SPRY domain-containing SOCS box protein 4 O... 40.0 0.056 sp|O09053|WRN_MOUSE Bifunctional 3'-5' exonuclease/ATP-dependent ... 40.8 0.057 sp|P85199|RH3_HELAN DEAD-box ATP-dependent RNA helicase 3 (Fragme... 39.7 0.064 sp|Q75AA7|MPH1_EREGS ATP-dependent DNA helicase MPH1 OS=Eremothec... 40.4 0.074 sp|P58174|UVRB_MYCPU UvrABC system protein B OS=Mycoplasmopsis pu... 40.0 0.075 sp|Q58969|Y1574_METJA Uncharacterized ATP-dependent helicase MJ15... 40.0 0.076 sp|Q9ZJ57|MFD_HELPJ Transcription-repair-coupling factor OS=Helic... 40.4 0.077 sp|O26066|MFD_HELPY Transcription-repair-coupling factor OS=Helic... 40.4 0.080 sp|Q58900|Y1505_METJA Putative ATP-dependent RNA helicase MJ1505 ... 40.0 0.081 sp|Q9VGI8|BLM_DROME RecQ-like DNA helicase Blm OS=Drosophila mela... 40.4 0.082 sp|A7LFZ6|DCL4_ORYSJ Endoribonuclease Dicer homolog 4 OS=Oryza sa... 40.4 0.084 sp|P35187|SGS1_YEAST ATP-dependent helicase SGS1 OS=Saccharomyces... 40.0 0.085 sp|P54509|YQHH_BACSU Uncharacterized ATP-dependent helicase YqhH ... 40.0 0.089 sp|P40724|RECQ_SALTY ATP-dependent DNA helicase RecQ OS=Salmonell... 40.0 0.094 sp|Q5XJK9|CMS1_DANRE Protein CMSS1 OS=Danio rerio OX=7955 GN=cmss... 39.3 0.10 sp|Q652L2|HIRA_ORYSJ Protein HIRA OS=Oryza sativa subsp. japonica... 40.0 0.10 sp|Q9UT23|MPH1_SCHPO ATP-dependent DNA helicase fml1 OS=Schizosac... 39.7 0.10 sp|Q68EV5|CMS1_XENLA Protein CMSS1 OS=Xenopus laevis OX=8355 GN=c... 38.9 0.11 sp|A4RHU9|DCL2_PYRO7 Dicer-like protein 2 OS=Pyricularia oryzae (... 39.7 0.12 sp|A7TSV4|MPH1_VANPO ATP-dependent DNA helicase MPH1 OS=Vanderwal... 39.7 0.13 sp|Q96UB6|SSH4_NEUCR Protein ssh4 OS=Neurospora crassa (strain AT... 39.3 0.14 sp|Q8BGE5|FANCM_MOUSE Fanconi anemia group M protein homolog OS=M... 39.7 0.15 sp|Q3MHZ2|SPSB3_BOVIN SPRY domain-containing SOCS box protein 3 O... 38.5 0.18 sp|O93530|WRN_XENLA Bifunctional 3'-5' exonuclease/ATP-dependent ... 39.3 0.18 sp|Q5FVR6|CMS1_RAT Protein CMSS1 OS=Rattus norvegicus OX=10116 GN... 38.1 0.20 sp|Q7XD96|DCL3B_ORYSJ Endoribonuclease Dicer homolog 3b OS=Oryza ... 38.9 0.21 sp|F1LMY4|RYR1_RAT Ryanodine receptor 1 OS=Rattus norvegicus OX=1... 38.9 0.21 sp|A0A1D5PRR9|FANCM_CHICK Fanconi anemia group M protein OS=Gallu... 38.9 0.22 sp|B4KNC5|FBSP1_DROMO F-box/SPRY domain-containing protein 1 OS=D... 38.1 0.22 sp|P53076|VID30_YEAST Vacuolar import and degradation protein 30 ... 38.9 0.22 sp|P50729|RECS_BACSU Probable ATP-dependent DNA helicase RecS OS=... 38.5 0.23 sp|A6ZVS0|MPH1_YEAS7 ATP-dependent DNA helicase MPH1 OS=Saccharom... 38.9 0.23 sp|Q57742|HELX_METJA Uncharacterized ATP-dependent helicase MJ029... 38.5 0.23 sp|P40562|MPH1_YEAST ATP-dependent DNA helicase MPH1 OS=Saccharom... 38.5 0.24 sp|Q6PJ21|SPSB3_HUMAN SPRY domain-containing SOCS box protein 3 O... 38.1 0.27 sp|Q0CEI2|DCL2_ASPTN Dicer-like protein 2 OS=Aspergillus terreus ... 38.5 0.29 sp|Q571F5|SPSB3_MOUSE SPRY domain-containing SOCS box protein 3 O... 38.1 0.29 sp|Q0UL22|DCL2_PHANO Dicer-like protein 2 OS=Phaeosphaeria nodoru... 38.5 0.30 sp|Q0U6G5|AMPP3_PHANO Probable Xaa-Pro aminopeptidase PEPP OS=Pha... 38.1 0.30 sp|A2QX45|DCL22_ASPNC Dicer-like protein 2-2 OS=Aspergillus niger... 38.1 0.34 sp|Q2T9Y1|CC026_BOVIN Uncharacterized protein C3orf26 homolog OS=... 37.4 0.36 sp|Q581T1|REH2_TRYB2 RNA editing associated helicase 2 OS=Trypano... 38.1 0.45 sp|P30015|LHR_ECOLI Probable ATP-dependent helicase Lhr OS=Escher... 37.7 0.48 sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 ... 37.7 0.52 sp|P43809|RECG_HAEIN ATP-dependent DNA helicase RecG OS=Haemophil... 37.4 0.53 sp|Q9FT74|RQL1_ARATH ATP-dependent DNA helicase Q-like 1 OS=Arabi... 37.4 0.54 sp|Q6TV19|DICER_DANRE Endoribonuclease Dicer OS=Danio rerio OX=79... 37.7 0.56 sp|Q8R418|DICER_MOUSE Endoribonuclease Dicer OS=Mus musculus OX=1... 37.4 0.59 sp|Q914K8|Y022_SIFVH Putative helicase 22 OS=Sulfolobus islandicu... 37.4 0.59 sp|P34529|DCR1_CAEEL Endoribonuclease dcr-1 OS=Caenorhabditis ele... 37.4 0.63 sp|A0MQH0|DICER_CRIGR Endoribonuclease Dicer OS=Cricetulus griseu... 37.4 0.64 sp|Q14191|WRN_HUMAN Bifunctional 3'-5' exonuclease/ATP-dependent ... 37.4 0.72 sp|A1CS00|MPH1_ASPCL ATP-dependent DNA helicase mph1 OS=Aspergill... 37.0 0.73 sp|P71359|RECQ_HAEIN ATP-dependent DNA helicase RecQ OS=Haemophil... 37.0 0.76 sp|Q39YM4|MURE_GEOMG UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2... 37.0 0.76 sp|P46063|RECQ1_HUMAN ATP-dependent DNA helicase Q1 OS=Homo sapie... 37.0 0.76 sp|Q25BN1|DICER_CHICK Endoribonuclease Dicer OS=Gallus gallus OX=... 37.0 0.80 sp|P24230|RECG_ECOLI ATP-dependent DNA helicase RecG OS=Escherich... 37.0 0.82 sp|Q8XD86|RECG_ECO57 ATP-dependent DNA helicase RecG OS=Escherich... 37.0 0.82 sp|B7UM74|RECG_ECO27 ATP-dependent DNA helicase RecG OS=Escherich... 36.6 0.88 sp|A1D9Z6|DCL2_NEOFI Dicer-like protein 2 OS=Neosartorya fischeri... 37.0 0.89 sp|B3DLA6|DICER_XENTR Endoribonuclease Dicer OS=Xenopus tropicali... 37.0 0.91 sp|Q9UPY3|DICER_HUMAN Endoribonuclease Dicer OS=Homo sapiens OX=9... 37.0 0.93 sp|Q6TUI4|DICER_BOVIN Endoribonuclease Dicer OS=Bos taurus OX=991... 37.0 0.98 sp|A4RN08|MPH1_PYRO7 ATP-dependent DNA helicase MPH1 OS=Pyricular... 36.6 1.0 sp|B2WMQ2|AMPP3_PYRTR Probable Xaa-Pro aminopeptidase pepP OS=Pyr... 36.6 1.0 sp|Q6FPQ3|MPH1_CANGA ATP-dependent DNA helicase MPH1 OS=Candida g... 36.6 1.1 sp|Q5A1A0|MPH1_CANAL ATP-dependent DNA helicase MPH1 OS=Candida a... 36.6 1.1 sp|A2R345|DCL21_ASPNC Dicer-like protein 2-1 OS=Aspergillus niger... 36.6 1.2 sp|E3S6N7|AMPP3_PYRTT Probable Xaa-Pro aminopeptidase pepP OS=Pyr... 36.2 1.2 sp|Q6CQX2|MPH1_KLULA ATP-dependent DNA helicase MPH1 OS=Kluyverom... 36.6 1.2 sp|P18160|SPLA_DICDI Dual specificity protein kinase splA OS=Dict... 36.6 1.2 sp|Q9CZT6|CMS1_MOUSE Protein CMSS1 OS=Mus musculus OX=10090 GN=Cm... 35.8 1.3 sp|Q5RF63|RECQ1_PONAB ATP-dependent DNA helicase Q1 OS=Pongo abel... 36.2 1.3 sp|I3XHK1|FANCM_ARATH DEAD-box ATP-dependent RNA helicase FANCM O... 36.2 1.3 sp|P0CR12|MRH4_CRYNJ ATP-dependent RNA helicase MRH4, mitochondri... 36.2 1.3 sp|P0CR13|MRH4_CRYNB ATP-dependent RNA helicase MRH4, mitochondri... 36.2 1.3 sp|Q09811|HUS2_SCHPO ATP-dependent DNA helicase hus2/rqh1 OS=Schi... 36.2 1.4 sp|Q9CMB4|RECG_PASMU ATP-dependent DNA helicase RecG OS=Pasteurel... 36.2 1.4 sp|A4RKC3|DCL1_PYRO7 Dicer-like protein 1 OS=Pyricularia oryzae (... 36.2 1.5 sp|A6M229|IOLC_CLOB8 5-dehydro-2-deoxygluconokinase OS=Clostridiu... 35.8 1.5 sp|Q54900|RECG_STRPN ATP-dependent DNA helicase RecG OS=Streptoco... 35.8 1.5 sp|Q16XV7|FBSP1_AEDAE F-box/SPRY domain-containing protein 1 OS=A... 35.4 1.6 sp|B0X9V1|FBSP1_CULQU F-box/SPRY domain-containing protein 1 OS=C... 35.0 1.7 sp|P0C5H7|DCL2_EMENI Dicer-like protein 2 OS=Emericella nidulans ... 35.8 1.8 sp|Q8IYD8|FANCM_HUMAN Fanconi anemia group M protein OS=Homo sapi... 35.8 2.0 sp|Q6BRF0|MPH1_DEBHA ATP-dependent DNA helicase MPH1 OS=Debaryomy... 35.8 2.1 sp|P25055|PGKA_CRIFA Phosphoglycerate kinase, glycosomal OS=Crith... 35.4 2.1 sp|F4HYD7|RANBM_ARATH Ran-binding protein M homolog OS=Arabidopsi... 35.4 2.2 sp|Q7SCC1|DCL2_NEUCR Dicer-like protein 2 OS=Neurospora crassa (s... 35.4 2.2 sp|Q9Z129|RECQ1_MOUSE ATP-dependent DNA helicase Q1 OS=Mus muscul... 35.4 2.4 sp|Q6AYJ1|RECQ1_RAT ATP-dependent DNA helicase Q1 OS=Rattus norve... 35.4 2.4 sp|Q2HG76|MPH1_CHAGB ATP-dependent DNA helicase MPH1 OS=Chaetomiu... 35.4 2.4 sp|A1C9M6|DCL2_ASPCL Dicer-like protein 2 OS=Aspergillus clavatus... 35.4 2.4 sp|Q4WA22|DCL2_ASPFU Dicer-like protein 2 OS=Aspergillus fumigatu... 35.4 2.5 sp|O53873|XPB_MYCTU DNA helicase XPB OS=Mycobacterium tuberculosi... 35.0 2.6 sp|Q8CSV3|RECG_STAES ATP-dependent DNA helicase RecG OS=Staphyloc... 35.4 2.6 sp|Q9FT73|RECQ2_ARATH ATP-dependent DNA helicase Q-like 2 OS=Arab... 35.4 2.6 sp|Q09884|DCR1_SCHPO Protein Dicer OS=Schizosaccharomyces pombe (... 35.4 2.6 sp|Q9D5L7|SPSB1_MOUSE SPRY domain-containing SOCS box protein 1 O... 34.7 2.7 sp|Q8K9I7|SYN_BUCAP Asparagine--tRNA ligase OS=Buchnera aphidicol... 35.0 2.7 sp|Q2H0G2|DCL1_CHAGB Dicer-like protein 1 OS=Chaetomium globosum ... 35.4 2.8 sp|P84634|DCL4_ARATH Dicer-like protein 4 OS=Arabidopsis thaliana... 35.4 2.8 sp|B7IEY7|UVRB_THEAB UvrABC system protein B OS=Thermosipho afric... 35.0 2.8 sp|Q0HLI3|MIAB_SHESM tRNA-2-methylthio-N(6)-dimethylallyladenosin... 35.0 2.8 sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3 OS=Arabi... 35.0 2.9 sp|Q3ATT8|UVRB_CHLCH UvrABC system protein B OS=Chlorobium chloro... 35.0 3.1 sp|Q96BD6|SPSB1_HUMAN SPRY domain-containing SOCS box protein 1 O... 34.3 3.1 sp|Q5E9X6|SPSB1_BOVIN SPRY domain-containing SOCS box protein 1 O... 34.3 3.1 sp|Q0HXT7|MIAB_SHESR tRNA-2-methylthio-N(6)-dimethylallyladenosin... 34.7 3.2 sp|Q2H679|MRH4_CHAGB ATP-dependent RNA helicase MRH4, mitochondri... 34.7 3.4 sp|A6RIS1|MPH1_BOTFB ATP-dependent DNA helicase MPH1 OS=Botryotin... 35.0 3.5 sp|A8F8W9|UVRB_PSELT UvrABC system protein B OS=Pseudothermotoga ... 34.7 3.6 sp|A7EFH4|MPH1_SCLS1 ATP-dependent DNA helicase mph1 OS=Sclerotin... 34.7 3.8 sp|A3GH78|MPH1_PICST ATP-dependent DNA helicase MPH1 OS=Scheffers... 34.7 4.1 sp|A0KTX4|MIAB_SHESA tRNA-2-methylthio-N(6)-dimethylallyladenosin... 34.3 4.4 sp|Q7SDF3|MPH1_NEUCR ATP-dependent DNA helicase mph1 OS=Neurospor... 34.7 4.5 sp|Q9KTE0|MIAB_VIBCH tRNA-2-methylthio-N(6)-dimethylallyladenosin... 34.3 4.6 sp|A5F2X6|MIAB_VIBC3 tRNA-2-methylthio-N(6)-dimethylallyladenosin... 34.3 4.6 sp|Q5AQN1|CCLA_EMENI COMPASS component cclA OS=Emericella nidulan... 34.3 4.6 sp|Q3Z5V2|RAPA_SHISS RNA polymerase-associated protein RapA OS=Sh... 34.7 4.7 sp|A8ALP3|RAPA_CITK8 RNA polymerase-associated protein RapA OS=Ci... 34.7 4.8 sp|O59025|HELS_PYRHO ATP-dependent DNA helicase Hel308 OS=Pyrococ... 34.3 4.8 sp|Q7UDT5|RAPA_SHIFL RNA polymerase-associated protein RapA OS=Sh... 34.3 4.8 sp|Q0T8D8|RAPA_SHIF8 RNA polymerase-associated protein RapA OS=Sh... 34.3 4.8 sp|B7LVT0|RAPA_ESCF3 RNA polymerase-associated protein RapA OS=Es... 34.3 4.8 sp|B1LFZ3|RAPA_ECOSM RNA polymerase-associated protein RapA OS=Es... 34.3 4.8 sp|Q8FL92|RAPA_ECOL6 RNA polymerase-associated protein RapA OS=Es... 34.3 4.8 sp|Q0TLT1|RAPA_ECOL5 RNA polymerase-associated protein RapA OS=Es... 34.3 4.8 sp|B7M0F4|RAPA_ECO8A RNA polymerase-associated protein RapA OS=Es... 34.3 4.8 sp|B7NHG5|RAPA_ECO7I RNA polymerase-associated protein RapA OS=Es... 34.3 4.8 sp|B7UIA5|RAPA_ECO27 RNA polymerase-associated protein RapA OS=Es... 34.3 4.8 sp|A7ZHF0|RAPA_ECO24 RNA polymerase-associated protein RapA OS=Es... 34.3 4.8 sp|Q1RGE0|RAPA_ECOUT RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|B6HZ39|RAPA_ECOSE RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|B7N7T3|RAPA_ECOLU RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|P60240|RAPA_ECOLI RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|B1IRB9|RAPA_ECOLC RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|C4ZPY3|RAPA_ECOBW RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|P60241|RAPA_ECO57 RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|B7L4I0|RAPA_ECO55 RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|B7MAI2|RAPA_ECO45 RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|A1A7A6|RAPA_ECOK1 RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|A7ZW09|RAPA_ECOHS RNA polymerase-associated protein RapA OS=Es... 34.3 4.9 sp|B2U265|RAPA_SHIB3 RNA polymerase-associated protein RapA OS=Sh... 34.3 5.0 sp|A6QPH9|ZMYM5_BOVIN Zinc finger MYM-type protein 5 OS=Bos tauru... 34.3 5.1 sp|Q32K36|RAPA_SHIDS RNA polymerase-associated protein RapA OS=Sh... 34.3 5.1 sp|B7MNR6|RAPA_ECO81 RNA polymerase-associated protein RapA OS=Es... 34.3 5.1 sp|Q326H6|RAPA_SHIBS RNA polymerase-associated protein RapA OS=Sh... 34.3 5.2 sp|Q8CX45|MIAB_SHEON tRNA-2-methylthio-N(6)-dimethylallyladenosin... 34.3 5.3 sp|Q2URJ5|MPH1_ASPOR ATP-dependent DNA helicase mph1 OS=Aspergill... 34.3 5.3 sp|B6DMK2|MER3_ORYSJ ATP-dependent DNA helicase MER3 homolog OS=O... 34.3 5.8 sp|Q2VF18|DCL2_CRYPA Dicer-like protein 2 OS=Cryphonectria parasi... 34.3 6.0 sp|Q4WKB5|MPH1_ASPFU ATP-dependent DNA helicase mph1 OS=Aspergill... 34.3 6.1 sp|B0XMV6|MPH1_ASPFC ATP-dependent DNA helicase mph1 OS=Aspergill... 34.3 6.1 sp|A0LJZ1|PGK_SYNFM Phosphoglycerate kinase OS=Syntrophobacter fu... 33.9 6.1 sp|A1BI09|UVRB_CHLPD UvrABC system protein B OS=Chlorobium phaeob... 33.9 6.2 sp|B4LMQ3|FBSP1_DROVI F-box/SPRY domain-containing protein 1 OS=D... 33.5 6.4 sp|Q290L5|FBSP1_DROPS F-box/SPRY domain-containing protein 1 OS=D... 33.5 6.4 sp|B4GBN7|FBSP1_DROPE F-box/SPRY domain-containing protein 1 OS=D... 33.5 6.4 sp|Q07XC8|RAPA_SHEFN RNA polymerase-associated protein RapA OS=Sh... 33.9 7.0 sp|A1D4V5|MPH1_NEOFI ATP-dependent DNA helicase mph1 OS=Neosartor... 33.9 7.2 sp|Q19546|WRN_CAEEL ATP-dependent helicase wrn-1 OS=Caenorhabditi... 33.9 7.2 sp|Q9CK01|RAPA_PASMU RNA polymerase-associated protein RapA OS=Pa... 33.9 7.4 sp|Q4WRW0|SSH4_ASPFU Protein ssh4 OS=Aspergillus fumigatus (strai... 33.5 7.6 sp|A8XT88|FBSP1_CAEBR F-box/SPRY domain-containing protein 1 OS=C... 33.5 7.7 sp|Q2T9X3|SPRY7_BOVIN SPRY domain-containing protein 7 OS=Bos tau... 32.7 8.0 sp|F4IDQ6|NIH_ARATH DExH-box ATP-dependent RNA helicase DExH2 OS=... 33.9 8.1 sp|Q9HE09|MFH2_SCHPO Putative ATP-dependent DNA helicase fml2 OS=... 33.5 8.7 sp|Q1DY43|MPH1_COCIM ATP-dependent DNA helicase MPH1 OS=Coccidioi... 33.5 8.9 sp|P57381|MFD_BUCAI Transcription-repair-coupling factor OS=Buchn... 33.5 9.6 sp|C0Q5F4|RAPA_SALPC RNA polymerase-associated protein RapA OS=Sa... 33.5 9.9 >sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sapiens OX=9606 GN=DDX1 PE=1 SV=2 Length=740 Score = 1542 bits (3993), Expect = 0.0, Method: Compositional matrix adjust. Identities = 740/740 (100%), Positives = 740/740 (100%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q4R7L5|DDX1_MACFA ATP-dependent RNA helicase DDX1 OS=Macaca fascicularis OX=9541 GN=DDX1 PE=2 SV=1 Length=740 Score = 1538 bits (3981), Expect = 0.0, Method: Compositional matrix adjust. Identities = 737/740 (99%), Positives = 740/740 (100%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLL+QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLTQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK+HIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF+QQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q5NVJ8|DDX1_PONAB ATP-dependent RNA helicase DDX1 OS=Pongo abelii OX=9601 GN=DDX1 PE=2 SV=1 Length=740 Score = 1537 bits (3979), Expect = 0.0, Method: Compositional matrix adjust. Identities = 738/739 (99%), Positives = 738/739 (99%), Gaps = 0/739 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQ LAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQGLAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRT 739 EAQTSFLHLGYLPNQLFRT Sbjct 721 EAQTSFLHLGYLPNQLFRT 739 >sp|Q641Y8|DDX1_RAT ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1 Length=740 Score = 1518 bits (3931), Expect = 0.0, Method: Compositional matrix adjust. Identities = 723/740 (98%), Positives = 737/740 (99%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGK TIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRAT+GL++GKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATRGLLRGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIP H+KNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPD Y+VKSQH+GNAQV+QTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDSYVVKSQHTGNAQVSQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKYIDNPKLRELLIIGGVAARDQLSVL+NGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ+TSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK+HIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF+QQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCS+RGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGG+YKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q91VR5|DDX1_MOUSE ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=1 SV=1 Length=740 Score = 1516 bits (3925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 722/740 (98%), Positives = 736/740 (99%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCR T+GL+KGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRGTRGLLKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIP H+KNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPD YIVKSQH+GNAQV+QTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDNYIVKSQHTGNAQVSQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKYIDNPKLRELLIIGGVAARDQLSVL+NGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ+T DGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQITCDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD+LWERLGK+HIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDKLWERLGKNHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF+QQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCS+RGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGG+YKGHVD+LAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDVLAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q0IIK5|DDX1_BOVIN ATP-dependent RNA helicase DDX1 OS=Bos taurus OX=9913 GN=DDX1 PE=2 SV=1 Length=740 Score = 1513 bits (3918), Expect = 0.0, Method: Compositional matrix adjust. Identities = 720/740 (97%), Positives = 734/740 (99%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGK TIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRATKGL KGKHYYEVSCHDQGLCRVGWS+MQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAP+ ++VKSQH+G+AQV QTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPESFVVKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKYIDNPKLRELLIIGGVAARDQLSVL+NGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINR+HNQIPQ+TSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD+VHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDEVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF+QQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR GGG+YKGHVD+LAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTLGGGNYKGHVDVLAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q90WU3|DDX1_CHICK ATP-dependent RNA helicase DDX1 OS=Gallus gallus OX=9031 GN=DDX1 PE=1 SV=1 Length=740 Score = 1417 bits (3669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 690/740 (93%), Positives = 718/740 (97%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQ EGKKGK TIKTG +VLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRAT+G+ KGK+YYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 +YGEEFTMHDTIGCYLDIDKG +KFSKNGKDLGLAFE PPH++NQALF ACVLKNAELKF Sbjct 181 SYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEFPPHIRNQALFAACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEE+FKFPPKDG++ L KAPDG +VKSQH+GNAQV QT+ LPNAPKALIVEPSRELAE Sbjct 241 NFGEEDFKFPPKDGYIGLCKAPDGNVVKSQHTGNAQVVQTQNLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKYIDNPKLRELLIIGGVAARDQLSVLE GVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLL QGYSDFINR+H+QIPQ+TSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVP+TVHHVVV VNPKTD+LWERLGK+HIRTD+VHAKDNT PGAN Sbjct 421 KIMHFPTWVDLKGEDSVPETVHHVVVIVNPKTDKLWERLGKNHIRTDEVHAKDNTLPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 +PEMWSEAIKILKGEY VRAIKEHKMDQAIIFCRTKIDCDN+EQYFIQQGGGPD+KGHQF Sbjct 481 TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKP ERKQNLERFK+GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVA EKEKVWYHVCSSRGKGCYNTRLKE+GGCTIWYNEMQLL Sbjct 601 HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVD+FDGKVTYGQKRA GGG YKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q5XH91|DDX1_XENTR ATP-dependent RNA helicase DDX1 OS=Xenopus tropicalis OX=8364 GN=ddx1 PE=2 SV=1 Length=740 Score = 1359 bits (3517), Expect = 0.0, Method: Compositional matrix adjust. Identities = 668/740 (90%), Positives = 713/740 (96%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVM EIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMAEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKT++KTG++VLNKWQMNPYDRGS+FAIGSDGLCCQSRE+KEWH Sbjct 61 IQIVYETLKDQQEGKKGKTSVKTGSTVLNKWQMNPYDRGSSFAIGSDGLCCQSREIKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCR+T+G+ KGK+YYEVSCHDQGLCRVGWST+QASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRSTRGVNKGKYYYEVSCHDQGLCRVGWSTLQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCY+DID G VK+SKNGKDLGLAF+IP H+KNQA+F +CVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYIDIDNGTVKYSKNGKDLGLAFQIPAHLKNQAVFASCVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEE+FKFPPKDGFVALSKAPDG++VKSQ++G+AQV+Q K LPNAPKALI+EPSRELAE Sbjct 241 NFGEEDFKFPPKDGFVALSKAPDGHVVKSQNTGSAQVSQAKNLPNAPKALIIEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKY+D+PKLRELLIIGGVAA++QL++LENGVDIVVGTPGR+DDL+STGKLN Sbjct 301 QTLNNVKQFKKYVDSPKLRELLIIGGVAAKEQLTLLENGVDIVVGTPGRIDDLISTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINR+H QIPQVTSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRIHGQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVP+TVHHVVVPVNPK D+ WERLGK+HIRTD VH KDNTRPG N Sbjct 421 KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKKDKQWERLGKNHIRTDGVHDKDNTRPGGN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 S EMWSEAIK+LKGEY VRAIKEHKMDQAIIFCRTK+DCDN+EQYFIQQGGGPDKKGHQF Sbjct 481 SAEMWSEAIKVLKGEYTVRAIKEHKMDQAIIFCRTKLDCDNMEQYFIQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLH DRKP ERK NLERFKK +VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHSDRKPQERKHNLERFKKCEVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVA EKEKVWYHVCSSRGKGC+NTRLKEDGGCTIWYNE QLLS Sbjct 601 HRIGRVGRAERMGLAISLVAAEKEKVWYHVCSSRGKGCHNTRLKEDGGCTIWYNETQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHL CTISQVEPDIKVP+DEFDGKV YGQ+RA GGG YKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLTCTISQVEPDIKVPLDEFDGKVVYGQRRATGGGLYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYL NQLFRTF Sbjct 721 EAQTSFLHLGYLSNQLFRTF 740 >sp|A2VD92|DDX1_XENLA ATP-dependent RNA helicase DDX1 OS=Xenopus laevis OX=8355 GN=ddx1 PE=2 SV=1 Length=740 Score = 1352 bits (3499), Expect = 0.0, Method: Compositional matrix adjust. Identities = 664/740 (90%), Positives = 711/740 (96%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGK ++KTG++VLNKWQMNPYDRGSAFAIGSDGLCCQSRE+KEWH Sbjct 61 IQIVYETLKDQQEGKKGKASVKTGSTVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCR+T+G+ KGK+YYEVSCHDQGLCRVGWST+ ASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRSTRGVNKGKYYYEVSCHDQGLCRVGWSTLSASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDID VKFSKNGKDLGLAF+IP HMKNQA F +CVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDNSIVKFSKNGKDLGLAFQIPSHMKNQAFFTSCVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEE+FKFPPKDGFVALSKAPDG++VKSQ++G+AQV+QTK LPNAPKALI+EPSRELAE Sbjct 241 NFGEEDFKFPPKDGFVALSKAPDGHVVKSQNTGSAQVSQTKSLPNAPKALIIEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKY+DNPKLRELLIIGGVAA++QL++LENGVDIVVGTPGR+DDL+STGKL+ Sbjct 301 QTLNNVKQFKKYVDNPKLRELLIIGGVAAKEQLTILENGVDIVVGTPGRIDDLISTGKLS 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINR++ QIPQ+TSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRIYGQIPQITSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVP+TVHHVVVPVNPK D+ WE+L K+HIRTD VH KDNTRPG N Sbjct 421 KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKKDKQWEKLAKNHIRTDGVHDKDNTRPGGN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 S E+WSEAIK+LKGEY VRAIKEHKMDQAIIFCRTK+DCDN+EQYFIQQGGGPDKKGHQF Sbjct 481 SAEVWSEAIKVLKGEYIVRAIKEHKMDQAIIFCRTKLDCDNMEQYFIQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLH DRKP ERK NLERFKK +VRFLICTDVAARGIDI GVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHSDRKPPERKHNLERFKKCEVRFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVA+EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVASEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHL CTISQVEPDIKVP+D+FDGKV YGQ+RA GGG YKGHVDILAPTVQELA+LEK Sbjct 661 EIEEHLTCTISQVEPDIKVPLDDFDGKVVYGQRRATGGGLYKGHVDILAPTVQELASLEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYL NQLFR+F Sbjct 721 EAQTSFLHLGYLSNQLFRSF 740 >sp|Q9VNV3|DDX1_DROME ATP-dependent RNA helicase Ddx1 OS=Drosophila melanogaster OX=7227 GN=Ddx1 PE=2 SV=1 Length=727 Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/731 (59%), Positives = 552/731 (76%), Gaps = 13/731 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M AF E GV+PE+ A +E+DW LPTD+QAE+IPLILGGGDVLMAAETGSGKTGAF +P+ Sbjct 1 MTAFEEFGVLPELGMATDELDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 +QIV+ETL+D +EGK + W M+ +DRG+A A+ DGL CQSRE KEWH Sbjct 61 LQIVWETLRDLEEGKA--GKGGAIGGAVTPWTMSFFDRGNALAVTPDGLRCQSREFKEWH 118 Query 121 GCRATKGLM-KGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQF 179 GCRAT G+ KGK Y+E + D+GLCRVGWST QA+LDLGT + GFGFGGTGKKS+N+QF Sbjct 119 GCRATTGVRGKGKFYFEATVTDEGLCRVGWSTQQANLDLGTCRMGFGFGGTGKKSNNRQF 178 Query 180 DNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELK 239 D+YGE F D IGC LD+ V F+KNG++LG+AF +P ++ + +PA VLKNAE++ Sbjct 179 DDYGEAFGKADVIGCLLDLKNQEVSFTKNGQNLGVAFRLPDNLAKETFYPAVVLKNAEMQ 238 Query 240 FNFGEEEFKFPPKDGFVALSKA-PDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 FNFG+ +FK+ P +GFV +A P+ A K PNAP+A+I+EPSREL Sbjct 239 FNFGKTDFKYAPGNGFVGACQAGPEHSKANPITGPAAGAPSAKPAPNAPQAIIMEPSREL 298 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK 358 AEQT N I++FK ++ NP++R LL+IGGV +Q + L G IVVGTPGRL++++++G Sbjct 299 AEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEEMINSGL 358 Query 359 LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKL 418 + L+ RF VLDEAD LL QGY++ I+R+H QIP++TSDG+RLQ++VCSATLH+F+VKK+ Sbjct 359 VLLTHCRFFVLDEADALLKQGYTELIDRLHKQIPKITSDGRRLQMVVCSATLHAFEVKKM 418 Query 419 SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 +E++MHFPTWVDLKGED+VP+TVHHVV V+P+ D W+ L + I TD VH +DN PG Sbjct 419 AERLMHFPTWVDLKGEDAVPETVHHVVCLVDPQMDTTWQSL-RQPIGTDGVHDRDNVHPG 477 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 +S E S+A+K+LKGEY V AI +H MD+AIIFCRTK DCDNLE++ Q+G G Sbjct 478 NHSKETLSQAVKLLKGEYCVHAIDKHNMDRAIIFCRTKQDCDNLERFLRQRG------GK 531 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 +SCVCLHGDRKP ERK+NLE FK+ V+FLICTDVAARG+DI G+P++INVTLPD+K N Sbjct 532 HYSCVCLHGDRKPQERKENLEMFKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTN 591 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYH--VCSSRGKGCYNTRLKEDGGCTIWYNEM 656 YVHRIGRVGRAERMGLAISLVAT EKVWYH C SRG+ C NT L E GC IWYNE Sbjct 592 YVHRIGRVGRAERMGLAISLVATVPEKVWYHGEWCKSRGRSCNNTNLTEVRGCCIWYNEP 651 Query 657 QLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELA 716 LL+E+E+HLN TI QV+ + VPV++FDGKV YGQK G Y+ HV+ L PTV++L Sbjct 652 NLLAEVEDHLNITIQQVDKTMDVPVNDFDGKVVYGQKNLRTGSGYEDHVEQLVPTVRKLT 711 Query 717 ALEKEAQTSFL 727 LE ++Q+ FL Sbjct 712 ELELQSQSLFL 722 >sp|Q55CP6|DDX1_DICDI Probable ATP-dependent RNA helicase ddx1 OS=Dictyostelium discoideum OX=44689 GN=ddx1 PE=3 SV=1 Length=765 Score = 610 bits (1572), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/776 (45%), Positives = 480/776 (62%), Gaps = 66/776 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M+AF ++GV+PEI +A+EE+DWLLPT IQ E+IPLILGGGDVL AAETGSGKTGAF++P+ Sbjct 1 MSAFEDLGVLPEIIKAIEELDWLLPTPIQTEAIPLILGGGDVLAAAETGSGKTGAFALPI 60 Query 61 IQIVYETLKDQQE----------GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 +QI YETL + E G+ G + G + +++ DR A+ DGL Sbjct 61 LQITYETLNKKAEIPIIAPTNTSGEDGTSGGGGGGGGGDTIELDQIDRDKNMAV--DGLI 118 Query 111 CQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGT 170 CQSR +W G +ATKG+ GK YYE D+GLCR+G++ ++S ++GTDKF +G+GGT Sbjct 119 CQSRS-SDWCGIKATKGISSGKFYYESIVRDEGLCRIGFALKKSSRNIGTDKFSWGYGGT 177 Query 171 GKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPA 230 GKKSH +F +YG+ F +D IGCY++ D+ + F+KNG+D G AF + K +PA Sbjct 178 GKKSHESKFIDYGKPFGNNDVIGCYINFDEEIIGFTKNGQDFGEAFTF--NSKAGIFYPA 235 Query 231 CVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG----------------- 273 VLKNAE++FNFG + K K G+ +++A ++ Q S Sbjct 236 LVLKNAEMEFNFGSKPMKHDLK-GYKPINQAE--LLIDQQTSTQIDNSKNNNNNNNKKGS 292 Query 274 --------------NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 N + K P +LI+EP+RELA+Q + I F KY+D+PK++ Sbjct 293 GNNKKNKGKDDDKMNDEDNNNK-QPRKTLSLIIEPTRELADQAYSAILNFSKYLDSPKIQ 351 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG 379 L IGG + + +E DI++GTPGRL+ LV G ++LS ++F VLDEAD L+ Sbjct 352 VSLCIGGEKSNGGRNKIEG--DIIIGTPGRLESLVKEGSIDLSSIKFFVLDEADQLIDDN 409 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + +N ++N++P G+ LQV+ SATLHS V K E+I PTWVDLKG D +PD Sbjct 410 LA-IVNFIYNKLPI----GQNLQVLFFSATLHSTKVIKFCEQITKNPTWVDLKGRDFIPD 464 Query 440 TVHHVVVPVNP-KTDRLWERLGKS-HIRTDDVHAKDNTRPGA-NSPEMWSEAIKILKGEY 496 + H V +P K + LW IRTD VHA D + G PE SEAIK+LK + Sbjct 465 LITHAYVKADPIKFESLWRNSENPLRIRTDGVHASDVQQFGKLKEPEQKSEAIKLLKAQL 524 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG--HQFSCVCLHG-DRKPHE 553 ++ I+ KMDQAIIF RT++DCD++ Q F++ GG + G +FS LHG D Sbjct 525 LLKCIQSFKMDQAIIFARTRLDCDHIHQ-FLKDAGGGNTSGLEGEFSSTVLHGGDNISRA 583 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 RK NLE+F+ GDVRFLICTDVAARGIDI G+PY+IN TLP+ ++Y+HR+GRVGR++R+G Sbjct 584 RKDNLEKFRNGDVRFLICTDVAARGIDIRGLPYMINYTLPESFEDYIHRVGRVGRSDRIG 643 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 LAISLVA E+EKVWYH C +GKGC+NT+L E+GGC IWY+E QL + I+E++ ++ Sbjct 644 LAISLVAYEQEKVWYHTCRDKGKGCHNTKLTENGGCCIWYDEPQLFTAIQENIGPI--EL 701 Query 674 EPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHL 729 + D ++P D K YK H + L V +L+ LE+ Q +L L Sbjct 702 DSDFQLPKDMKQLNFGGSTKLTGASADYKPHTEELRSRVLQLSQLEETIQIDYLTL 757 >sp|Q24731|DDX1_DROVI ATP-dependent RNA helicase Ddx1 (Fragment) OS=Drosophila virilis OX=7244 GN=Ddx1 PE=3 SV=1 Length=400 Score = 447 bits (1149), Expect = 2e-150, Method: Compositional matrix adjust. Identities = 224/378 (59%), Positives = 275/378 (73%), Gaps = 37/378 (10%) Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD LL QGY+D I R+H QIP++TSDG RLQ+IVCSATLH+F+VKK++E++MHFPTW Sbjct 2 DEADRLLKQGYTDLIERLHKQIPKITSDGCRLQMIVCSATLHAFEVKKMAERLMHFPTWG 61 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 DLKGED+VP+TVHHVV V+P TD W++L + I TD VH DN P SPE +S+A+ Sbjct 62 DLKGEDAVPETVHHVVCMVDPHTDSSWQQL-RQPIHTDGVHDHDNVHPTNQSPETFSQAV 120 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K+LKGEY +RAI +HKMD+AIIFCRTK DCDNLEQ+ Q+G G +FSCVCLHGDR Sbjct 121 KLLKGEYCIRAIDQHKMDRAIIFCRTKQDCDNLEQHLSQRG------GQRFSCVCLHGDR 174 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY------------------VINVT 591 KP ERKQNLE FK+ +V+FLICTDVAARG+DI G+P+ VIN+T Sbjct 175 KPQERKQNLEMFKRQEVKFLICTDVAARGLDITGLPFSKDLKYLSENTLNFPNLAVINIT 234 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH--VCSSRGKGCYNTRLKEDGGC 649 LPD+K NYVHRIGRVGR E MGLAISLV+T EKVWYH C +RG+ G C Sbjct 235 LPDDKSNYVHRIGRVGRPESMGLAISLVSTVPEKVWYHGEWCKTRGRS---------GSC 285 Query 650 TIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILA 709 IWYNE LL+E+E+HLN TI QV + VPV++FDGKV YGQK G Y+ HV+ L Sbjct 286 -IWYNEPNLLAEVEDHLNITIQQVVKSLDVPVNDFDGKVVYGQKNLNMGTGYEDHVEQLG 344 Query 710 PTVQELAALEKEAQTSFL 727 PTV++ LE ++Q+ FL Sbjct 345 PTVRKQTDLELQSQSLFL 362 >sp|P25888|RHLE_ECOLI ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12) OX=83333 GN=rhlE PE=1 SV=3 Length=454 Score = 180 bits (456), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 117/343 (34%), Positives = 176/343 (51%), Gaps = 59/343 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q N++ + KY++ +R L++ GGV+ Q+ L GVD++V TP Sbjct 77 RALILTPTRELAAQIGENVRDYSKYLN---IRSLVVFGGVSINPQMMKLRGGVDVLVATP 133 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL + L QV LVLDEAD +L G+ I R+ ++P KR Q ++ S Sbjct 134 GRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLP-----AKR-QNLLFS 187 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT S D+K L+EK++H P +++ ++ D V T Sbjct 188 ATF-SDDIKALAEKLLHNPLEIEVARRNTASDQV------------------------TQ 222 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 VH D R E+ S I KG + Q ++F RTK ++L + Sbjct 223 HVHFVDKKR----KRELLSHMIG--KGNW----------QQVLVFTRTKHGANHLAEQLN 266 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G +HG++ R + L FK GD+R L+ TD+AARG+DI +P+V Sbjct 267 KDG---------IRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHV 317 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 +N LP+ ++YVHRIGR GRA G A+SLV ++ K+ + Sbjct 318 VNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/81 (36%), Positives = 51/81 (63%), Gaps = 4/81 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +G+ P+I +AV E + PT IQ ++IP +L G D++ +A+TG+GKT F++P++Q Sbjct 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 Query 63 IVYETLKDQQEGKKGKTTIKT 83 L +Q KG+ ++ Sbjct 62 ----HLITRQPHAKGRRPVRA 78 >sp|Q0ILZ4|RH9_ORYSJ DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0611200 PE=2 SV=1 Length=628 Score = 168 bits (425), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 117/358 (33%), Positives = 182/358 (51%), Gaps = 64/358 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA+Q +++ D+ + + + GG Q+ L GVD+V+GT Sbjct 173 PLAIVLAPTRELAKQVE------REFSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGT 226 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL+ G LNLS+VRF+VLDEAD +LS G+ + + + +++P + Q ++ Sbjct 227 PGRVIDLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVP------PKRQTLMF 280 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ ++ +++L++K + P +DL GED +L E + I + Sbjct 281 SATMPTW-IQRLTQKYLKNPVTIDLVGEDD----------------QKLAEGISLYSIAS 323 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH-KMDQAIIFCRTKIDCDNLEQY 525 + HAK P + E IKEH K + I+F +TK D D L Sbjct 324 EG-HAK---------PAVLGE------------LIKEHAKGGKCIVFTQTKRDADRLSYT 361 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 G F C LHGD +R++ L+ F++G LI TDVAARG+DI V Sbjct 362 M----------GRSFQCQALHGDITQAQRERTLKGFREGHFNILIATDVAARGLDIPNVD 411 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRL 643 VI+ LP+ + +VHR GR GRA + G AI + + ++ + V GC T L Sbjct 412 LVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIRMV--ENDVGCKFTEL 467 >sp|Q19614|SLFL2_CAEEL Schlafen-like protein 2 OS=Caenorhabditis elegans OX=6239 GN=tofu-2 PE=1 SV=3 Length=433 Score = 163 bits (413), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 82/175 (47%), Positives = 110/175 (63%), Gaps = 3/175 (2%) Query 92 QMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLM-KGKHYYEVSCHDQGLCRVGWS 150 ++N D+ I GL C+S K W G R T GL GK+YYEV+ +GLCRVGW+ Sbjct 10 KLNKQDQDLHLEIDETGLACKSEVKKRWLGARGTAGLYGNGKYYYEVTITSKGLCRVGWA 69 Query 151 TMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK 210 T+ SL++G FG+GGTG KS +K+FD+YG FT++D IGCYLD+D + +SKNG+ Sbjct 70 TLGGSLNIGKGLDSFGYGGTGMKSTHKKFDDYGLPFTLNDVIGCYLDLDSRTIWWSKNGE 129 Query 211 DLGLAFEIPPHMKNQ--ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPD 263 AF I KN LFPA + +N+ L NFG + FKFPP + F A+S AP+ Sbjct 130 QFPAAFSIDVKYKNSNTCLFPAVLCQNSSLSVNFGSQPFKFPPGNQFTAVSDAPN 184 >sp|A0A1D6LAB7|RH3B_MAIZE DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3B PE=2 SV=1 Length=743 Score = 168 bits (425), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 118/396 (30%), Positives = 193/396 (49%), Gaps = 80/396 (20%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ L++ P+RELA+Q IK+ PKL + + GGV+ Q + L GVD+VVGT Sbjct 165 PRVLVLAPTRELAKQVEKEIKE-----SAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGT 219 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL++ G L L +V++LVLDEAD +L+ G+ + + + Q+P G+ Q ++ Sbjct 220 PGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPA----GR--QSMLF 273 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKG--EDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT+ S+ VKKLS + ++ P +DL G ++ + + + +P+ + R Sbjct 274 SATMPSW-VKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTTTSKR---------- 322 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + S+ I + YA K + I+F RTK D D + Sbjct 323 ------------------TVLSDLITV----YA-------KGGKTIVFTRTKKDADEVSL 353 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + LHGD H+R++ L F++G L+ TDVAARG+DI V Sbjct 354 ALT----------NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNV 403 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 +I+ LP++ + +VHR GR GRA + G AI + + +++ L+ Sbjct 404 DLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVKS-------------LE 450 Query 645 EDGGCTIWYNEMQLLSEI----EEHLNCTISQVEPD 676 D GC + + E+ EH+ T+ V P+ Sbjct 451 RDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHPE 486 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 26/79 (33%), Positives = 45/79 (57%), Gaps = 5/79 (6%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 A + +G+ E+ +E+ + L P IQ + L G D++ A+TG+GKT AF IP+ Sbjct 89 AIARLGLPDELVATLEKRGITHLFP--IQRAVLIPALEGRDLIARAKTGTGKTLAFGIPM 146 Query 61 IQIVYETLKDQQEGKKGKT 79 I+ + E D + ++G+T Sbjct 147 IKQLIEQ-DDGRITRRGRT 164 >sp|P27639|IF4A_CAEEL Eukaryotic initiation factor 4A OS=Caenorhabditis elegans OX=6239 GN=inf-1 PE=2 SV=1 Length=402 Score = 161 bits (408), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 110/358 (31%), Positives = 173/358 (48%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q + +Y++ + L IGG + RD LE G+ +VVGTP Sbjct 99 QALVMAPTRELAQQIQKVMSALGEYLN---VNILPCIGGTSVRDDQRKLEAGIHVVVGTP 155 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D+++ L+ S+++ VLDEAD +LS+G+ D I + +PQ +QV++ S Sbjct 156 GRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQ------DVQVVLLS 209 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ S +V ++ + M P + +K ++ + + + V Sbjct 210 ATMPS-EVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQ------------------ 250 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 KD W L Y V + QA+IFC T+ D L + Sbjct 251 ----KDE----------WK--FDCLCDLYNVVNVT-----QAVIFCNTRRKVDTLTEKMT 289 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + +QF+ CLHGD ER + F+ G R LI TD+ ARGID+ V V Sbjct 290 E---------NQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLV 340 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP ++NY+HRIGR GR R G+AI+ V + + + Y T+++E Sbjct 341 INYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEI-----ESYYTTQIEE 393 Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 34/60 (57%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + E+ + + + P+ IQ +I G DV+ A++G+GKT FS+ ++Q Sbjct 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89 >sp|A0A1D6GDY8|RH3A_MAIZE DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3A PE=3 SV=1 Length=745 Score = 166 bits (421), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 117/396 (30%), Positives = 190/396 (48%), Gaps = 80/396 (20%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ L++ P+RELA+Q IK+ PKL + + GGV+ Q + L GVD+VVGT Sbjct 165 PRVLVLAPTRELAKQVEKEIKE-----SAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGT 219 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL++ G L L +V++LVLDEAD +L+ G+ + + + Q+P Q ++ Sbjct 220 PGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLP------ADRQSMLF 273 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKG--EDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT+ S+ VKKLS + ++ P +DL G ++ + + + +P+ + R Sbjct 274 SATMPSW-VKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLHAIPLTATSKR---------- 322 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + S+ I + YA K + I+F RTK D D + Sbjct 323 ------------------TILSDLITV----YA-------KGGKTIVFTRTKKDADEVSL 353 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + LHGD H+R++ L F++G L+ TDVAARG+DI V Sbjct 354 ALTT----------SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNV 403 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 +I+ LP++ + +VHR GR GRA + G AI + + +++ L+ Sbjct 404 DLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVMS-------------LE 450 Query 645 EDGGCTIWYNEMQLLSEI----EEHLNCTISQVEPD 676 D GC + + E+ EH+ T+ V P+ Sbjct 451 RDVGCKFEFISPPSIEEVLESSAEHVIATLRGVHPE 486 Score = 40.4 bits (93), Expect = 0.070, Method: Compositional matrix adjust. Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 5/79 (6%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 A + +G+ E+ +E+ + L P IQ + LGG D++ A+TG+GKT AF IP+ Sbjct 89 AIARLGLPDELVATLEKRGITHLFP--IQRAVLIPALGGRDLIARAKTGTGKTLAFGIPM 146 Query 61 IQIVYETLKDQQEGKKGKT 79 I+ + E D + ++G+T Sbjct 147 IKQLMEQ-DDGRSTRRGRT 164 >sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0827700 PE=2 SV=2 Length=758 Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 108/354 (31%), Positives = 175/354 (49%), Gaps = 65/354 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ L++ P+RELA+Q IK+ PKL + + GGV+ Q + L GVD+VVGT Sbjct 181 PRVLVLAPTRELAKQVEKEIKE-----SAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGT 235 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL++ G L L +V++LVLDEAD +L+ G+ + + + Q+P Q ++ Sbjct 236 PGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLP------AERQSMLF 289 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKG--EDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT+ + VKKLS + ++ P +DL G ++ + + + +P+ + R Sbjct 290 SATMPGW-VKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTSKR---------- 338 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + S+ I + YA K + I+F +TK D D + Sbjct 339 ------------------TVLSDLITV----YA-------KGGKTIVFTKTKRDADEVSL 369 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + LHGD H+R++ L F++G L+ TDVAARG+DI V Sbjct 370 ALT----------NSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNV 419 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 +I+ LP++ + +VHR GR GRA + G AI + + + + R GC Sbjct 420 DLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSL--ERDVGC 471 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/78 (31%), Positives = 44/78 (56%), Gaps = 5/78 (6%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 A + +G+ ++ +E+ + L P IQ + L G D++ A+TG+GKT AF IP+ Sbjct 105 AIARLGLPEQLVSTLEKRGITHLFP--IQRAVLIPALDGRDLIARAKTGTGKTLAFGIPM 162 Query 61 IQIVYETLKDQQEGKKGK 78 I+ + E D + ++G+ Sbjct 163 IKQLMEE-DDGRSVRRGR 179 >sp|P9WH05|DEAD_MYCTU ATP-dependent RNA helicase DeaD OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=deaD PE=1 SV=1 Length=563 Score = 159 bits (402), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/334 (31%), Positives = 163/334 (49%), Gaps = 60/334 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+AL++ P+RELA Q ++ Y+ +L L I GG + QL+ L G +VVGT Sbjct 82 PQALVLVPTRELALQVAEAFGRYGAYLS--QLNVLPIYGGSSYAVQLAGLRRGAQVVVGT 139 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D + L+LS+V FLVLDEAD +L+ G++D + R+ ++ P+ QV + Sbjct 140 PGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYK------QVALF 193 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ ++KLS K +H P V K + +V + + + V K D L Sbjct 194 SATMPP-AIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVARKMDAL----------- 241 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 R ++ + I+F RTK + + + Sbjct 242 -------------------------------TRVLEVEPFEAMIVFVRTKQATEEIAEKL 270 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +G FS + GD +R++ + + GD+ L+ TDVAARG+D+ + + Sbjct 271 RARG---------FSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARGLDVERISH 321 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 V+N +P + ++YVHRIGR GRA R G A+ V+ Sbjct 322 VLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVS 355 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 0/71 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F+++ + P + +A+ ++ + PT IQA +IP ++ G DV+ A+TG+GKT AF+IP++ Sbjct 13 ATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPML 72 Query 62 QIVYETLKDQQ 72 + T K Q Sbjct 73 SKIDITSKVPQ 83 >sp|P9WH04|DEAD_MYCTO ATP-dependent RNA helicase DeaD OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=deaD PE=3 SV=1 Length=563 Score = 159 bits (402), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 102/334 (31%), Positives = 163/334 (49%), Gaps = 60/334 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+AL++ P+RELA Q ++ Y+ +L L I GG + QL+ L G +VVGT Sbjct 82 PQALVLVPTRELALQVAEAFGRYGAYLS--QLNVLPIYGGSSYAVQLAGLRRGAQVVVGT 139 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D + L+LS+V FLVLDEAD +L+ G++D + R+ ++ P+ QV + Sbjct 140 PGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYK------QVALF 193 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ ++KLS K +H P V K + +V + + + V K D L Sbjct 194 SATMPP-AIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVARKMDAL----------- 241 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 R ++ + I+F RTK + + + Sbjct 242 -------------------------------TRVLEVEPFEAMIVFVRTKQATEEIAEKL 270 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +G FS + GD +R++ + + GD+ L+ TDVAARG+D+ + + Sbjct 271 RARG---------FSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARGLDVERISH 321 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 V+N +P + ++YVHRIGR GRA R G A+ V+ Sbjct 322 VLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVS 355 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 47/71 (66%), Gaps = 0/71 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F+++ + P + +A+ ++ + PT IQA +IP ++ G DV+ A+TG+GKT AF+IP++ Sbjct 13 ATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPML 72 Query 62 QIVYETLKDQQ 72 + T K Q Sbjct 73 SKIDITSKVPQ 83 >sp|Q81DF9|CSHE_BACCR DEAD-box ATP-dependent RNA helicase CshE OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=cshE PE=2 SV=1 Length=458 Score = 155 bits (393), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 112/351 (32%), Positives = 172/351 (49%), Gaps = 64/351 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALIV P+RELA Q IK K + + L I GG QL L+ IVV TP Sbjct 75 QALIVAPTRELALQITTEIK--KMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVATP 132 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL D + ++LS + +VLDEAD +L G+ I + ++ P G + Q ++ S Sbjct 133 GRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETP-----GSK-QTMLFS 186 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ D+KKL+++ M P + ++ E+ DT+ V+ Sbjct 187 ATMPK-DIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVI--------------------- 224 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ---AIIFCRTKIDCDNLEQ 524 D +P A +R + + DQ A+IFCRTK+ L Sbjct 225 --ETTDRAKPDA------------------LRFVMDR--DQPFLAVIFCRTKVRASKLYD 262 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 KG ++C LHGD +R++ ++ F++ +++LI TDVAARG+D+ GV Sbjct 263 NL---------KGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATDVAARGLDVDGV 313 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 +V N +P++ ++Y+HRIGR GRA GLAI+ VA + EK + + G Sbjct 314 THVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEKTLG 364 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E+G+ + E T IQ ++IP+IL G D++ A+TG+GKT AF +P+++ Sbjct 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILE 65 >sp|A6SCT6|DBP3_BOTFB ATP-dependent RNA helicase dbp3 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp3 PE=3 SV=1 Length=592 Score = 157 bits (397), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 115/340 (34%), Positives = 178/340 (52%), Gaps = 52/340 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A++V P+RELA Q+ I + K L + + GGV +Q+ L+ DIVV T Sbjct 249 PRAVVVSPTRELAMQSYEQIVKLAKA---SGLECVCVYGGVPKDEQIRALKTA-DIVVAT 304 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL++ G +LS+ R++VLDEAD +L +G+ + I ++ N P + GKR Q ++ Sbjct 305 PGRLNDLINQGCADLSKARYVVLDEADRMLDKGFEEEIRKIINTTPSL---GKR-QTLMF 360 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD-RLWERLGKSHIR 465 +AT V++L+ M P + + NP D R R+ + + Sbjct 361 TATWPE-SVRELAATFMTSPV---------------KIAIGDNPTGDLRANSRIVQ---K 401 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + V +D +++LK +Y + K+ D+ ++FC K + +E + Sbjct 402 VEVVEPRDKEY----------RLMQLLK-QYQSGSQKD---DRILVFCLYKKEATRVESF 447 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 Q+G F +HGD +R ++LE FK G+ L+ TDVAARG+DI V Sbjct 448 IRQKG---------FRVAGIHGDLSQEQRTRSLEAFKSGNTPVLVATDVAARGLDIPAVK 498 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 VIN T P ++YVHRIGR GRA + GLAI+L TE +K Sbjct 499 LVINCTFPLTVEDYVHRIGRTGRAGKDGLAITLF-TEHDK 537 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/48 (52%), Positives = 31/48 (65%), Gaps = 0/48 (0%) Query 14 AQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 AQ D+ PT IQA + P +L G DV+ AETGSGKT AF++P I Sbjct 198 AQRAPFKDFKAPTPIQAAAWPFLLAGRDVIGVAETGSGKTMAFAVPCI 245 >sp|Q55D61|IF4A_DICDI Eukaryotic initiation factor 4A OS=Dictyostelium discoideum OX=44689 GN=tifA PE=3 SV=1 Length=405 Score = 153 bits (387), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 107/360 (30%), Positives = 171/360 (48%), Gaps = 63/360 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 +P+ LI+ P+RELA+Q ++++ ++ +GG D + LE GV IV G Sbjct 100 SPQVLILSPTRELAQQIQKVALALSEFMN---IQVHACVGGKNLSDDVKKLETGVHIVSG 156 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D+++ L ++ ++LDEAD +LS G+ IN ++ +P T Q+++ Sbjct 157 TPGRVLDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGT------QIVL 210 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL DV ++EK M P + LK ++ D + V V Sbjct 211 VSATLTQ-DVVSMTEKFMTKPVRILLKRDELTLDGIKQFFVSVE---------------- 253 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 K++ + G S I QA+IFC TK D L + Sbjct 254 ------KEDWKFGTLCDIYDSLTIT-----------------QAVIFCNTKKKVDQLTEQ 290 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + F+ +HGD ER++ ++ F+ G+ R LI TD+ ARGID+ V Sbjct 291 M---------RDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVS 341 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP +++NY+HRIGR GR R G+AI+ V ++ + + Y+T++ E Sbjct 342 LVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDI-----EQFYSTQIDE 396 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 37/70 (53%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ E+ + + + P+ IQ +I I+ G D + A++G+GKT FSI +Q Sbjct 33 TFESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKTATFSIGALQ 92 Query 63 IVYETLKDQQ 72 V ++ Q Sbjct 93 CVEVNVRSPQ 102 >sp|Q7S5R1|DBP3_NEUCR ATP-dependent RNA helicase dbp-3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-3 PE=3 SV=1 Length=614 Score = 157 bits (396), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 116/348 (33%), Positives = 174/348 (50%), Gaps = 53/348 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVV 344 P+A+IV P+RELA QT + + L + I GG +Q ++L NGVDI+ Sbjct 258 PRAVIVSPTRELAMQTHAALSGLASLVG---LSAVCIFGGSDKNEQRNLLYKNNGVDIIT 314 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D +S G ++L+ V F VLDEAD +L +G+S+ I + + P ++ Q + Sbjct 315 ATPGRLKDFLSEGSISLANVSFAVLDEADRMLDRGFSEDIKLILSGCPP----KEQRQTL 370 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT D++KL+E M P V T+ H R G Sbjct 371 MFTATW-PLDIQKLAESYMINPAQV----------TIGHRT------------RAGGDGE 407 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV-RAIKE-----HKMDQAIIFCRTKID 518 ++ + N+R E E + E+ + +KE K D+ ++FC K + Sbjct 408 GNGNIELQANSRI-----EQKVEVVDPRGKEFRLYELLKEAQKGSQKDDRILVFCLYKKE 462 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 +EQ+ ++G +HGD + +R ++LE FK G L+ TDVAARG Sbjct 463 AVRVEQFLSRKG---------IKVASIHGDLRQDQRTRSLEAFKSGTTTVLVATDVAARG 513 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +DI V VINVT P ++YVHRIGR GRA ++G AI+L TE +K Sbjct 514 LDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKLGKAITLF-TEHDKA 560 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/38 (58%), Positives = 27/38 (71%), Gaps = 0/38 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 PT IQ+ S P L G DV+ AETGSGKT AFS+P ++ Sbjct 202 PTPIQSASWPFSLSGRDVIGIAETGSGKTMAFSLPCVE 239 >sp|Q755N4|DBP2_EREGS ATP-dependent RNA helicase DBP2 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP2 PE=3 SV=2 Length=557 Score = 155 bits (393), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 111/345 (32%), Positives = 168/345 (49%), Gaps = 62/345 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F + + ++R + GGV Q+ L+ GV+I++ Sbjct 186 DGPVVLVLAPTRELAVQIQKECSKFGR---SSRIRNTCVYGGVPKSQQIRDLQRGVEILI 242 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 243 ATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 296 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNP--KTDRLWERLGK 461 + SAT +V++L+ +H P V++ E + T+ +V V+ K DRL + L Sbjct 297 MWSATWPK-EVQQLARDYLHDPIQVNIGSLELAASHTITQLVEVVSDFDKRDRLVKHL-- 353 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 ++ +KD K + IIF TK CD Sbjct 354 ------EIASKD-------------------------------KDSKIIIFASTKRTCDE 376 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + Y Q G + + +HGD++ ER L F+ G ++ TDVAARGID+ Sbjct 377 ITSYLRQDG---------WPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDVAARGIDV 427 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 G+ +VIN +P ++YVHRIGR GRA G AIS TE K Sbjct 428 KGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFF-TEANKT 471 Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + + V+E + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 113 IRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPG 172 Query 61 I 61 I Sbjct 173 I 173 >sp|A7EYW0|DBP3_SCLS1 ATP-dependent RNA helicase dbp3 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp3 PE=3 SV=2 Length=596 Score = 155 bits (393), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 115/340 (34%), Positives = 178/340 (52%), Gaps = 52/340 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A++V P+RELA Q+ I + K L + + GGV +Q+ L+ DIVV T Sbjct 253 PRAVVVSPTRELAMQSYEQIVKLAKA---SGLECVCVYGGVPKDEQIRALKTA-DIVVAT 308 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL++ G +LS+ R++VLDEAD +L +G+ + I ++ N P + GKR Q ++ Sbjct 309 PGRLNDLINQGCADLSKARYVVLDEADRMLDKGFEEEIRKIINTTPSL---GKR-QTLMF 364 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD-RLWERLGKSHIR 465 +AT V++L+ M P + + NP D R R+ + + Sbjct 365 TATWPE-SVRELASTFMTSPV---------------KIAIGDNPTGDLRANSRIVQ---K 405 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + V +D +++LK +Y + K+ D+ ++FC K + +E + Sbjct 406 VEVVEPRDKE----------YRLMQLLK-QYQSGSQKD---DRILVFCLYKKEATRVEGF 451 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 Q+G F +HGD +R ++LE FK G+ L+ TDVAARG+DI V Sbjct 452 IRQKG---------FRVAGIHGDLSQEQRTRSLEAFKSGNTPVLVATDVAARGLDIPAVK 502 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 VIN T P ++YVHRIGR GRA + GLAI+L TE +K Sbjct 503 LVINCTFPLTVEDYVHRIGRTGRAGKDGLAITLF-TEHDK 541 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/98 (37%), Positives = 49/98 (50%), Gaps = 5/98 (5%) Query 14 AQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQE 73 AQ D+ PT IQA + P +L G DV+ AETGSGKT AF++P ++ + K+Q Sbjct 191 AQRAPFKDFKAPTPIQAAAWPFLLAGRDVIGVAETGSGKTMAFAVPCVRYMSSLPKNQ-- 248 Query 74 GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 K K S + M Y++ A S GL C Sbjct 249 --KNKGPRAVVVSPTRELAMQSYEQIVKLAKAS-GLEC 283 >sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP2 PE=3 SV=1 Length=554 Score = 155 bits (391), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 108/335 (32%), Positives = 162/335 (48%), Gaps = 57/335 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q K+ K+ + ++R + GGV Q+ L+ GV+I++ Sbjct 185 DGPIVLVLAPTRELAVQIQ---KECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILI 241 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 242 ATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 295 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SAT +VK+L+ +H P V + E S T+ +V + R +RL K H Sbjct 296 MWSATWPK-EVKQLASDYLHDPIQVQIGSLELSASHTITQIVEVLTDFEKR--DRLAK-H 351 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + T + + + IIF TK CD + Sbjct 352 LET----------------------------------ASQDQDSKIIIFASTKRTCDEIT 377 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 Y +G + + +HGD+ +ER L F+ G ++ TDVAARGID+ G Sbjct 378 SYLRTEG---------WPALAIHGDKAQNERDWVLAEFRSGRSPIMVATDVAARGIDVKG 428 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + YVIN +P ++YVHRIGR GRA G AIS Sbjct 429 INYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISF 463 Score = 41.2 bits (95), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G + V++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 112 IRSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPG 171 Query 61 I 61 I Sbjct 172 I 172 >sp|Q814I2|DBPA_BACCR ATP-dependent RNA helicase DbpA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=dbpA PE=2 SV=1 Length=481 Score = 153 bits (387), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 106/339 (31%), Positives = 167/339 (49%), Gaps = 65/339 (19%) Query 285 NAPKALIVEPSRELAEQT---LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD 341 N P+AL++ P+RELA Q + NI +FK+ ++ + G Q L+ Sbjct 71 NKPQALVLTPTRELAVQVKEDITNIGRFKR------IKAAAVYGKSPFARQKLELKQKTH 124 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 IVVGTPGR+ D + G L+L +++LV+DEAD +L+ G+ D + + +++P KR+ Sbjct 125 IVVGTPGRVLDHIEKGTLSLECLKYLVIDEADEMLNMGFIDQVEAIIDELPT-----KRM 179 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 ++ SATL DV+KLS M+ PT +++K D + H + V Sbjct 180 TMLF-SATLPE-DVEKLSRTYMNSPTHIEIKAAGITTDKIEHTLFEV------------- 224 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + E + +LK + D IIFCRT+ + D+ Sbjct 225 ----------------------IEDEKLSLLKDVTTI-----ENPDSCIIFCRTQENVDH 257 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + K + C +HG +R + ++ F+KG R+L+ TDVAARGIDI Sbjct 258 VYRQL---------KRANYPCDKIHGGMVQEDRFEVMDDFRKGKFRYLVATDVAARGIDI 308 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 + +VIN +P EK++YVHR GR GRA G AI+ + Sbjct 309 DNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFIT 347 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS+ + EI +A+ + + PT++Q E IP+ L D+++ ++TGSGKT +F IP+ + Sbjct 5 SFSDYKLSKEIVRALTGLGYDHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64 Query 63 IV 64 +V Sbjct 65 MV 66 >sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0599500 PE=3 SV=1 Length=623 Score = 154 bits (390), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 110/340 (32%), Positives = 160/340 (47%), Gaps = 64/340 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+REL+ Q ++F +R ++ GG QL LE GVDI+V T Sbjct 236 PLALILSPTRELSMQIHEEARKFSYQT---GVRVVVAYGGAPINQQLRDLERGVDILVAT 292 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ +++L +R+L LDEAD +L G+ + R+ Q+ + G R Q ++ Sbjct 293 PGRLVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVEQM-DMPPPGAR-QTMLF 350 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL------- 459 SAT FP + D + + + V V TD + +R+ Sbjct 351 SAT---------------FPKEIQRMASDFLENYIFLAVGRVGSSTDLIVQRVEFVQEAD 395 Query 460 GKSHIRTDDVHA-KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 +SH+ D +HA +D+ PG K ++F TK Sbjct 396 KRSHL-MDLLHAQRDSATPG--------------------------KPTLTLVFVETKRG 428 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D+LE + G F +HGDR ER+ L FK G L+ TDVAARG Sbjct 429 ADSLEHWLCMNG---------FPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARG 479 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +DI V +V+N LP++ +YVHRIGR GRA + GLA + Sbjct 480 LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAF 519 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 0/86 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + + + ++ PT +Q +IP+ L G D++ A+TGSGKT AF P+I Sbjct 157 FAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISG 216 Query 64 VYETLKDQQEGKKGKTTIKTGASVLN 89 + Q+ + G T A +L+ Sbjct 217 IMRGPPAQRPQRGGMRTACPLALILS 242 >sp|Q55804|CRHR_SYNY3 RNA helicase CrhR OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=crhR PE=1 SV=1 Length=492 Score = 152 bits (385), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 105/333 (32%), Positives = 164/333 (49%), Gaps = 60/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA+Q +K F +L L + GG + Q+ LE GV IVVGTP Sbjct 76 QALILTPTRELAQQVAEAMKDFSH---ERRLFILNVYGGQSIERQIRSLERGVQIVVGTP 132 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ KL L ++++VLDEAD +LS G+ D + + + P Q S Sbjct 133 GRVIDLIDRKKLKLETIQWVVLDEADEMLSMGFIDDVKTILRKTPPTR------QTACFS 186 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ ++K+L + ++ P V +K S P + + V Sbjct 187 ATMPR-EIKELVNQFLNDPALVTVKQTQSTPTRIEQQLYHV------------------- 226 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK-MDQAIIFCRTKIDCDNLEQYF 526 P WS+A A++ I E + + AIIF RTK +L Sbjct 227 --------------PRGWSKA-------KALQPILEMEDPESAIIFVRTKQTAADLTSRL 265 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G D+ HG+ +R++ + RF+ G ++ ++ TD+AARG+D++ + + Sbjct 266 QEAGHSVDE---------YHGNLSQSQRERLVHRFRDGKIKLVVATDIAARGLDVNNLSH 316 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V+N LPD + Y+HRIGR GRA + G AI+LV Sbjct 317 VVNFDLPDNAETYIHRIGRTGRAGKTGKAIALV 349 Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 43/60 (72%), Gaps = 0/60 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+++G+ + Q + ++ + PT IQ E+IPL+L G D+L ++TG+GKT AF++P++ Sbjct 7 STFADLGLSEKRCQLLADIGFEAPTQIQTEAIPLLLSGRDMLAQSQTGTGKTAAFALPLM 66 >sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana OX=3702 GN=RH37 PE=2 SV=2 Length=633 Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 113/360 (31%), Positives = 174/360 (48%), Gaps = 66/360 (18%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 I+K QH + ++T + P A+I+ P+RELA Q + K+F ++ ++ G Sbjct 221 IMKDQHVQRPRGSRTVY----PLAVILSPTRELASQIHDEAKKFSYQT---GVKVVVAYG 273 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G QL LE GVDI+V TPGRL+DL+ ++++ +RFL LDEAD +L G+ I Sbjct 274 GTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIR 333 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ Q+ + G R Q ++ SAT FP + D + + + V Sbjct 334 KIVEQM-DMPPRGVR-QTLLFSAT---------------FPREIQRLAADFLANYIFLAV 376 Query 446 VPVNPKTDRLWERL-------GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 V TD + +R+ +SH+ D +HA+ ++G+ A+ Sbjct 377 GRVGSSTDLIVQRVEFVLDSDKRSHL-MDLLHAQRENG---------------IQGKQAL 420 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 ++F TK D+LE + G F +HGDR ER+ L Sbjct 421 ----------TLVFVETKRGADSLENWLCING---------FPATSIHGDRTQQEREVAL 461 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + FK G L+ TDVAARG+DI V +V+N LP++ +YVHRIGR GRA + GLA + Sbjct 462 KAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAF 521 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 4/87 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + + + ++ PT +Q +IP++L G D++ A+TGSGKT AF P+I Sbjct 161 FAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISG 220 Query 64 VYETLKDQQ-EGKKGKTTIKTGASVLN 89 + +KDQ + +G T+ A +L+ Sbjct 221 I---MKDQHVQRPRGSRTVYPLAVILS 244 >sp|A2QFL3|DBP3_ASPNC ATP-dependent RNA helicase dbp3 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp3 PE=3 SV=1 Length=495 Score = 152 bits (383), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 116/351 (33%), Positives = 165/351 (47%), Gaps = 62/351 (18%) Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 N Q + K P P A+++ P+RELA Q + I +F + +D ++ I GGV +Q Sbjct 139 NLQDSAKKGKPYKPTAVMISPTRELAMQIHDQISKFAELVD---IKVACIFGGVKKEEQR 195 Query 334 SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 L+ IVV TPGRL DL + G ++L +V++LVLDEAD +L +G+ I + +P Sbjct 196 EALKTAA-IVVATPGRLKDLQNDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIIRPMPV 254 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP----DTVHHVVVPVN 449 + Q ++ +AT V+ L+ M P V + GE S + VV V Sbjct 255 -----SKRQTVMFTATWPPV-VRDLAATFMTSPVTVTIGGEPSADPRANTRIKQVVEVVK 308 Query 450 P--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 P K RL + L K KG + D Sbjct 309 PHEKEQRLVQLLNKYQ-----------------------------KGPSS--------SD 331 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 + ++FC K + +E+ +G F +HGD ER ++LE FKKG Sbjct 332 KILVFCLYKKEAVRVERLLWNKG---------FKVAGIHGDLGQQERFKSLESFKKGVST 382 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 L+ TDVAARG+DI V VINVT P ++YVHRIGR GRA G AI+L Sbjct 383 VLVATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITL 433 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 41/81 (51%), Gaps = 8/81 (10%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTG 84 PT IQ+ + P + G DV+ AETGSGKT F +P ++ + Q KKGK T Sbjct 101 PTAIQSATWPFLFSGRDVIGIAETGSGKTLGFGLPCLKNL------QDSAKKGKPYKPTA 154 Query 85 A--SVLNKWQMNPYDRGSAFA 103 S + M +D+ S FA Sbjct 155 VMISPTRELAMQIHDQISKFA 175 >sp|P44586|DEAD_HAEIN ATP-dependent RNA helicase DeaD OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=deaD PE=3 SV=1 Length=613 Score = 154 bits (388), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 106/358 (30%), Positives = 170/358 (47%), Gaps = 60/358 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ L++ P+RELA Q + + F KY ++ + + GG QL L+ G +VVGT Sbjct 74 PQMLVMAPTRELAIQVADACELFVKYAQGTRI--VTLYGGQRYDIQLRALKQGAQVVVGT 131 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D + G LNLS++RF+VLDEAD +L G+ D + + ++P+ Q + Sbjct 132 PGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVMAELPE------NHQTALF 185 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLK-GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ +++++++ M+ P V +K ++ PD W Sbjct 186 SATMPE-PIRRITKRFMNDPQEVKIKVNNENAPDIDQSC-----------WY-------- 225 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 VH + K E +R ++ D AIIF RTK ++ + Sbjct 226 ---VHG-------------------VRKNEALLRFLEVEDFDAAIIFARTKTGTLDITEL 263 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G F L+GD R+Q L+R + G + ++ TDVAARGIDI + Sbjct 264 LEKNG---------FRSAALNGDMTQQLREQTLDRLRNGSLDIVVATDVAARGIDIERIS 314 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRL 643 V+N +P + ++YVHRIGR GRA R G A+ V + ++ ++ KG L Sbjct 315 LVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLRNIEHLMKKGINEVEL 372 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 40/59 (68%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ I +AV ++ + P+ IQ IP +L G DVL A+TGSGKT AF++P++ Sbjct 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLL 64 >sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana OX=3702 GN=RH43 PE=3 SV=1 Length=542 Score = 152 bits (384), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 108/343 (31%), Positives = 168/343 (49%), Gaps = 60/343 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDN---PKLRELLIIGGVAARDQLSVLENGVDIV 343 P AL++ PSRELA+QT + ++QF + P+LR LL IGGV R QL V++ GV IV Sbjct 174 PIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIV 233 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGRL D+++ K++L R L LDEAD L+ G+ D I + + + Q Sbjct 234 VATPGRLKDILAKKKMSLDACRLLTLDEADRLVDLGFEDDIRHVFDHF------KSQRQT 287 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT+ + KI F T +K P TV+ +G++ Sbjct 288 LLFSATMPA--------KIQIFATSALVK-----PVTVN----------------VGRAG 318 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 DV E + KI+ Y + +++ +IFC K D D++ Sbjct 319 AANLDV---------IQEVEYVKQEAKIV---YLLECLQK-TTPPVLIFCENKADVDDIH 365 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 +Y + +G V +HG + +R + FK G L+ TDVA++G+D Sbjct 366 EYLLLKG---------VEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPD 416 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 + +VIN +P E +NYVHRIGR GR + G+A + + + ++ Sbjct 417 IQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTFINKNQSEI 459 Score = 41.6 bits (96), Expect = 0.025, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F +M + + +++ + PT IQ + +P++L G D++ A TGSGKT F +P+I Sbjct 99 FMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMI 156 >sp|Q12099|FAL1_YEAST ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FAL1 PE=1 SV=1 Length=399 Score = 149 bits (375), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 127/425 (30%), Positives = 193/425 (45%), Gaps = 75/425 (18%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDG--Y 265 +D L F+ +K + F + LK+ L+ +++G F+ P A+++ G Sbjct 7 EDQKLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYG---FEAPSSIQSRAITQIISGKDV 63 Query 266 IVKSQHSGNAQVTQTKFLPNAP-------KALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 I ++Q T T L A +ALI+ P+RELA Q +K Y++ + Sbjct 64 IAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMN---V 120 Query 319 RELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 I GG +D L ++ +G V GTPGR+ D++ L V+ LVLDEAD LLS Sbjct 121 NAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLS 180 Query 378 Q--GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 + G+ I + ++P K QV+V SAT++ D+ +++ K M+ P + +K ++ Sbjct 181 ETLGFKQQIYDIFAKLP------KNCQVVVVSATMNK-DILEVTRKFMNDPVKILVKRDE 233 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + VV V+ E W K + Sbjct 234 ISLEGIKQYVVNVDK--------------------------------EEW-------KFD 254 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + Q +IFC TK D L Q IQ F+ V +HGD K ER Sbjct 255 TLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSN---------FAVVSMHGDMKQEERD 305 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + + F+ G R LI TDV ARGID+ V VIN LP+ +NY+HRIGR GR R G+A Sbjct 306 KVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVA 365 Query 616 ISLVA 620 I+ + Sbjct 366 INFIT 370 Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 60/129 (47%), Gaps = 6/129 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F M + ++ + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++ Sbjct 23 STFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL 82 Query 62 QIVYETLKDQQEGKKGKT---TIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 Q + KD Q T + G V N + Y +AFAI + + Sbjct 83 QAIDLRKKDLQALILSPTRELASQIGQVVKN---LGDYMNVNAFAITGGKTLKDDLKKMQ 139 Query 119 WHGCRATKG 127 HGC+A G Sbjct 140 KHGCQAVSG 148 >sp|A6ZXY5|FAL1_YEAS7 ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=FAL1 PE=3 SV=1 Length=399 Score = 149 bits (375), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 127/425 (30%), Positives = 193/425 (45%), Gaps = 75/425 (18%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDG--Y 265 +D L F+ +K + F + LK+ L+ +++G F+ P A+++ G Sbjct 7 EDQKLKFKTSKKLKVSSTFESMNLKDDLLRGIYSYG---FEAPSSIQSRAITQIISGKDV 63 Query 266 IVKSQHSGNAQVTQTKFLPNAP-------KALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 I ++Q T T L A +ALI+ P+RELA Q +K Y++ + Sbjct 64 IAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMN---V 120 Query 319 RELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 I GG +D L ++ +G V GTPGR+ D++ L V+ LVLDEAD LLS Sbjct 121 NAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLS 180 Query 378 Q--GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 + G+ I + ++P K QV+V SAT++ D+ +++ K M+ P + +K ++ Sbjct 181 ETLGFKQQIYDIFAKLP------KNCQVVVVSATMNK-DILEVTRKFMNDPVKILVKRDE 233 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + VV V+ E W K + Sbjct 234 ISLEGIKQYVVNVDK--------------------------------EEW-------KFD 254 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + Q +IFC TK D L Q IQ F+ V +HGD K ER Sbjct 255 TLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSN---------FAVVSMHGDMKQEERD 305 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + + F+ G R LI TDV ARGID+ V VIN LP+ +NY+HRIGR GR R G+A Sbjct 306 KVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVA 365 Query 616 ISLVA 620 I+ + Sbjct 366 INFIT 370 Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 60/129 (47%), Gaps = 6/129 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F M + ++ + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++ Sbjct 23 STFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL 82 Query 62 QIVYETLKDQQEGKKGKT---TIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 Q + KD Q T + G V N + Y +AFAI + + Sbjct 83 QAIDLRKKDLQALILSPTRELASQIGQVVKN---LGDYMNVNAFAITGGKTLKDDLKKMQ 139 Query 119 WHGCRATKG 127 HGC+A G Sbjct 140 KHGCQAVSG 148 >sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0143700 PE=2 SV=2 Length=602 Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 108/343 (31%), Positives = 168/343 (49%), Gaps = 66/343 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q K+FK ++ L L + GGV Q+ L GVD+VVGT Sbjct 159 PLAIILAPTRELARQVE---KEFK---ESAPLDSLCVYGGVPISHQMRALNYGVDVVVGT 212 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL+ G LNLS+++F+VLDEAD +L+ G+ + + + +PQ Q ++ Sbjct 213 PGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQ------NRQSMLF 266 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDS--VPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT+ S+ ++K++ K + P +DL G++ +P+ + + E GK I Sbjct 267 SATMPSW-IRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSI--------ASEHYGKPSI 317 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM-DQAIIFCRTKIDCDNLE 523 IKEH + I+F +TK + D L Sbjct 318 LGP--------------------------------LIKEHANGGKCIVFTQTKREADRLA 345 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G ++C LHGD ++R++ L F+ G L+ TDVAARG+DI Sbjct 346 YAM----------GRSYACQALHGDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPN 395 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 V VI+ LP+ + +VHR GR RA + G AI + ++ + Sbjct 396 VDLVIHYELPNTSELFVHRSGRTARAGKKGSAILIYTNDQARA 438 >sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP2 PE=3 SV=3 Length=554 Score = 152 bits (383), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 108/347 (31%), Positives = 161/347 (46%), Gaps = 55/347 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F + ++R I GG Q+ L GV+I + Sbjct 197 DGPIVLVLAPTRELAVQIQQECSKFGA---SSRIRNTCIYGGAPKGQQIRDLARGVEICI 253 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ TGK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 254 ATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 307 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V+ L+ ++ P V + + L SH Sbjct 308 MWSATWPK-EVQTLTRDYLNDPIQVTIGSLE-----------------------LAASHT 343 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T V + + +++K A KE K+ +IF TK CD + Sbjct 344 ITQIVEVLSE----------FEKRDRLVKHLETATADKEAKV---LIFSSTKRACDEITS 390 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Y G + + +HGD++ +ER L FK G ++ TDVAARGID+ G+ Sbjct 391 YLRADG---------WPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVAARGIDVKGI 441 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 YVIN +P ++YVHRIGR GRA G A+SL K+ +C Sbjct 442 SYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTEANSKLGGDLC 488 Score = 42.0 bits (97), Expect = 0.019, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G + V++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 124 ITSFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPS 183 Query 61 I 61 I Sbjct 184 I 184 >sp|Q6BT27|FAL1_DEBHA ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=FAL1 PE=3 SV=1 Length=399 Score = 148 bits (374), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 107/335 (32%), Positives = 162/335 (48%), Gaps = 58/335 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA+Q + +K Y++ + IGG + + L+ G IV GTP Sbjct 96 QALILSPTRELAQQIQSVVKHLGDYMN---VHTHACIGGTHVGEDIKKLQQGQQIVSGTP 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ ++LDEAD L+++G+ + I ++ +P +QV+V S Sbjct 153 GRVVDMIKRRNLATRNIKMMILDEADELMTKGFKEQIYEIYRYLP------PGVQVVVVS 206 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL S +V +++ K P + +K +D E + + HI+ + Sbjct 207 ATL-SREVLEVTGKFTTDPVKILVKRDDIT------------------LEGIKQYHIQCE 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W K + + QA+IFC TK+ + L Sbjct 248 --------------KEDW-------KFDTLCDLYDSLTITQAVIFCNTKVKVNWLTDQM- 285 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 K F+ V +HGD K ER + F+ G+ R LI TDV ARGID+ V V Sbjct 286 --------KKANFTVVAMHGDMKQDERDSIMNDFRTGNSRVLISTDVWARGIDVQQVSLV 337 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 IN LP +K+NYVHRIGR GR R G+AI+LV E Sbjct 338 INYDLPTDKENYVHRIGRSGRFGRKGVAINLVTKE 372 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/71 (30%), Positives = 40/71 (56%), Gaps = 0/71 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F M + ++ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI ++ Sbjct 26 ATFESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGML 85 Query 62 QIVYETLKDQQ 72 +++ KD Q Sbjct 86 EVIDTKSKDCQ 96 >sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0150100 PE=2 SV=2 Length=627 Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 111/336 (33%), Positives = 166/336 (49%), Gaps = 60/336 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFK---KYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P +I+ PSRELA+QT + I+QF K P++R LL IGGV R QL V++ GV IV Sbjct 259 PFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHIV 318 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGRL DL++ K+NL R+L LDEAD L+ G+ D I + + + Q Sbjct 319 VATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF------KAQRQT 372 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT + +KI +F V V+V V R G ++ Sbjct 373 LLFSAT--------MPKKIQNFAKSA----------LVKPVIVNVG--------RAGAAN 406 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + DV E E +I+ Y + +++ ++FC K D D + Sbjct 407 L---DV---------IQEVEYVKEDARII---YLLECLQKTP-PPVLVFCENKADVDYIH 450 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 +Y + +G V +HG + ER+ +E FK G L+ TDVA++G+D Sbjct 451 EYLLLKG---------VEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFPD 501 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + +VIN +P E +NYVHRIGR GR + G+A + + Sbjct 502 IQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFI 537 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + + E + PT IQ + +P++L G D++ A TGSGKT F +P+I + Sbjct 184 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 243 Query 64 VYE 66 + Sbjct 244 ALQ 246 >sp|Q9LUW5|RH53_ARATH DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH53 PE=1 SV=1 Length=616 Score = 151 bits (382), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 105/340 (31%), Positives = 167/340 (49%), Gaps = 61/340 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+RELA Q K+F++ P L + + GG Q+ L+ GVD+ VGT Sbjct 179 PLCLVLAPTRELARQVE---KEFRE--SAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGT 233 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL+ G LNLS+V+F+VLDEAD +L G+++ + + ++P+ + Q ++ Sbjct 234 PGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPE------KRQSMMF 287 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ S+ ++ L++K ++ P VDL G+ ++L I T Sbjct 288 SATMPSW-IRSLTKKYLNNPLTVDLVGDSD--------------------QKLADG-ITT 325 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH-KMDQAIIFCRTKIDCDNLEQY 525 + A R P + EH K + I+F +TK D D L Sbjct 326 YSIIADSYGRASIIGP-----------------LVTEHAKGGKCIVFTQTKRDADRLSYA 368 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F C LHGD +R++ L F+ G L+ TDVAARG+D+ V Sbjct 369 L----------ARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVD 418 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +I+ LP+ + +VHR GR GRA + G AI + + ++ + Sbjct 419 LIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSR 458 Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 37/61 (61%), Gaps = 4/61 (7%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 A SE+G+ PEI +A+ ++ L P IQ + + G D++ A TG+GKT AF IP+ Sbjct 105 AISELGISPEIVKALSSKGIEKLFP--IQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPI 162 Query 61 I 61 I Sbjct 163 I 163 >sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP2 PE=1 SV=1 Length=546 Score = 150 bits (379), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 111/344 (32%), Positives = 167/344 (49%), Gaps = 62/344 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F + ++R + GGV Q+ L G +IV+ Sbjct 185 DGPIVLVLAPTRELAVQIQTECSKFGH---SSRIRNTCVYGGVPKSQQIRDLSRGSEIVI 241 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 242 ATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 295 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVN--PKTDRLWERLGK 461 + SAT +VK+L+ ++ P V + E S + +V V+ K DRL + L Sbjct 296 MWSATWPK-EVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYL-- 352 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + ++DN EY + +IF TK CD+ Sbjct 353 ------ETASQDN--------------------EY-----------KTLIFASTKRMCDD 375 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + +Y + G + + +HGD+ ER L+ F+ G ++ TDVAARGID+ Sbjct 376 ITKYLREDG---------WPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDV 426 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 G+ YVIN +P ++YVHRIGR GRA G AIS TE+ K Sbjct 427 KGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFF-TEQNK 469 Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 112 ITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 171 Query 61 I 61 I Sbjct 172 I 172 >sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP2 PE=3 SV=1 Length=546 Score = 150 bits (379), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 111/344 (32%), Positives = 167/344 (49%), Gaps = 62/344 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F + ++R + GGV Q+ L G +IV+ Sbjct 185 DGPIVLVLAPTRELAVQIQTECSKFGH---SSRIRNTCVYGGVPKSQQIRDLSRGSEIVI 241 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 242 ATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 295 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVN--PKTDRLWERLGK 461 + SAT +VK+L+ ++ P V + E S + +V V+ K DRL + L Sbjct 296 MWSATWPK-EVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYL-- 352 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + ++DN EY + +IF TK CD+ Sbjct 353 ------ETASQDN--------------------EY-----------KTLIFASTKRMCDD 375 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + +Y + G + + +HGD+ ER L+ F+ G ++ TDVAARGID+ Sbjct 376 ITKYLREDG---------WPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDV 426 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 G+ YVIN +P ++YVHRIGR GRA G AIS TE+ K Sbjct 427 KGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFF-TEQNK 469 Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 112 ITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 171 Query 61 I 61 I Sbjct 172 I 172 >sp|Q8L7S8|RH3_ARATH DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH3 PE=1 SV=2 Length=748 Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 109/353 (31%), Positives = 174/353 (49%), Gaps = 61/353 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 PK L++ P+RELA+Q IK+ P L + + GGV+ Q S L GVD+VVGT Sbjct 181 PKFLVLAPTRELAKQVEKEIKE-----SAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGT 235 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL+ L L +V +LVLDEAD +L+ G+ + + + +P + Q ++ Sbjct 236 PGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPT------KRQSMLF 289 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ ++ VKKL+ K + P +DL G+ + ++L E + I T Sbjct 290 SATMPTW-VKKLARKYLDNPLNIDLVGD----------------QDEKLAEGIKLYAIAT 332 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + + S+ I + YA K + I+F +TK D D + Sbjct 333 TSTSKR----------TILSDLITV----YA-------KGGKTIVFTQTKRDADEVSLAL 371 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + + LHGD H+R++ L F++G L+ TDVA+RG+DI V Sbjct 372 ----------SNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDL 421 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 VI+ LP++ + +VHR GR GRA + G AI + + +++ + R GC+ Sbjct 422 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSL--ERDVGCH 472 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 23/70 (33%), Positives = 40/70 (57%), Gaps = 4/70 (6%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 A S++ + + +++E+ + L P IQ + L G D++ A+TG+GKT AF IP+ Sbjct 103 AISKLSLPQRLEESLEKRGITHLFP--IQRAVLVPALQGRDIIARAKTGTGKTLAFGIPI 160 Query 61 IQIVYETLKD 70 I+ + E D Sbjct 161 IKRLTEEAGD 170 >sp|Q9M2F9|RH52_ARATH DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana OX=3702 GN=RH52 PE=1 SV=1 Length=646 Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 108/332 (33%), Positives = 159/332 (48%), Gaps = 48/332 (14%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q + ++F ++ ++ GG Q+ LE GVDI+V T Sbjct 225 PLAVILSPTRELACQIHDEARKFSYQT---GVKVVVAYGGTPVNQQIRELERGVDILVAT 281 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ G+++L VRFL LDEAD +L G+ I ++ Q+ + G R Q ++ Sbjct 282 PGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQM-DMPPPGVR-QTMLF 339 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + D + + + V V TD + +R+ Sbjct 340 SAT---------------FPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRV------- 377 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + VH D S + +L + + K ++F TK D+LE + Sbjct 378 EFVHDSDKR----------SHLMDLLHAQR--ENGNQGKQALTLVFVETKKGADSLENWL 425 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G F +HGDR ER+ L FK G L+ TDVAARG+DI V + Sbjct 426 CING---------FPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAH 476 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V+N LP++ +YVHRIGR GRA GLA + Sbjct 477 VVNFDLPNDIDDYVHRIGRTGRAGNSGLATAF 508 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/68 (34%), Positives = 41/68 (60%), Gaps = 3/68 (4%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + + ++ ++ PT +Q +IP++ G D++ A+TGSGKT AF P+I Sbjct 148 FAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISG 207 Query 64 VYETLKDQ 71 + +KDQ Sbjct 208 I---MKDQ 212 >sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP2 PE=3 SV=1 Length=536 Score = 150 bits (378), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 109/350 (31%), Positives = 164/350 (47%), Gaps = 61/350 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q ++ K+ + ++R + GG Q+ L GV+I + Sbjct 177 DGPIVLVLAPTRELAVQIQ---QECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICI 233 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ TGK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 234 ATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 287 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNP--KTDRLWERLGK 461 + SAT +V+ L+ ++ P V + E + T+ +V V K DRL + L Sbjct 288 MWSATWPK-EVQALTRDYLNDPIQVTVGSLELAASHTITQLVEVVTEFEKRDRLIKHLET 346 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + T D AK +IF TK CD Sbjct 347 A---TADPEAK------------------------------------CLIFASTKRTCDE 367 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + Y G + + +HGD++ ER L+ FK G ++ TDVAARGID+ Sbjct 368 ITNYLRADG---------WPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGIDV 418 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 G+ YVIN+ +P ++YVHRIGR GRA G A+S K+ +C Sbjct 419 KGISYVINLDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLGGDLC 468 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G + + V++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 104 ITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPMALSGRDMVGIASTGSGKTLSYCLPS 163 Query 61 I 61 I Sbjct 164 I 164 >sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0549400 PE=2 SV=2 Length=792 Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 104/341 (30%), Positives = 166/341 (49%), Gaps = 57/341 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q L +F + + ++ + GG QL L+ GVD+VV Sbjct 221 SGPTVLVLAPTRELATQILEEAVKFGR---SSRISSTCLYGGAPKGPQLRDLDRGVDVVV 277 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL+D++ +++L QV +LVLDEAD +L G+ I ++ +IP R Q + Sbjct 278 ATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIP------PRRQTL 331 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT +V++++E ++ P V + D E + S I Sbjct 332 MYTATWPK-EVRRIAEDLLVHPVQVTIGSVD---------------------ELVANSAI 369 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T +V E+ + + K+ + E +R+ + + +IFC TK CD L + Sbjct 370 -TQNV-------------ELITPSEKLRRLEQILRS--QDSGSKVLIFCTTKRMCDQLAR 413 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + QF +HGD+ ER++ L F+ G L+ TDVAARG+DI + Sbjct 414 TLTR----------QFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAARGLDIKDI 463 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 VIN P ++YVHRIGR GRA G+A + + K Sbjct 464 RVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSK 504 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +F G PEI + ++ + PT IQA+S P+ L DV+ A+TGSGKT + +P Sbjct 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLP 207 >sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP2 PE=3 SV=2 Length=562 Score = 150 bits (378), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 108/350 (31%), Positives = 167/350 (48%), Gaps = 61/350 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F K + ++R + GG Q+ L GV+I + Sbjct 199 DGPIVLVLAPTRELAVQIQTECSKFGK---SSRIRNTCVYGGAPKGPQIRDLARGVEICI 255 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 256 ATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 309 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVN--PKTDRLWERLGK 461 + SAT +V++L+ ++ P V + E + T+ +V ++ K DRL + L Sbjct 310 MWSATWPK-EVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLES 368 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + ++ KDN KIL +F TK CD Sbjct 369 A------LNEKDN---------------KIL------------------VFASTKRTCDE 389 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + Y G + + +HGD++ +ER L+ F+KG ++ TDVAARGID+ Sbjct 390 ITTYLRSDG---------WPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDV 440 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 G+ +VIN +P ++YVHRIGR GR G AIS K+ +C Sbjct 441 KGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLC 490 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + Q V++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 126 ITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPS 185 Query 61 I 61 I Sbjct 186 I 186 >sp|A1C5V3|DBP3_ASPCL ATP-dependent RNA helicase dbp3 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp3 PE=3 SV=1 Length=503 Score = 149 bits (375), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 117/355 (33%), Positives = 168/355 (47%), Gaps = 67/355 (19%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + KF P A+I+ P+RELA Q + Q KY + ++ I GGV +Q L++ Sbjct 152 KIKFKNARPAAVIISPTRELAMQIYD---QISKYAGSIGIKATCIFGGVKKDEQREALKS 208 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 IVV TPGRL DL + G ++L +V++LVLDEAD +L +G+ I + + P D Sbjct 209 AA-IVVATPGRLKDLQNDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIISSTP----DS 263 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS--------VPDTVHHVVVPVNP 450 KR Q ++ +AT V+ L+ M V + G+ S + TV VV + Sbjct 264 KR-QTVMFTATWPP-SVRDLAATFMTSAVTVTIGGDPSADPRANTRIKQTVE--VVQSHD 319 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K RL + L +N R A +D+ + Sbjct 320 KEYRLVQLLS------------ENQRGAA-------------------------ALDKVL 342 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 +FC K + +E+ + F +HGD HER ++L+ FK G L+ Sbjct 343 VFCLYKKEAMRVERLL---------RNKNFKVAGIHGDLNQHERFKSLDAFKSGAATVLV 393 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 TDVAARG+DI V VINVT P ++YVHRIGR GRA G AI+L TE +K Sbjct 394 ATDVAARGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGAEGRAITLF-TETDK 447 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (6%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTG 84 PT IQ+ + PL+ G DV+ AETGSGKT AF +P ++ + ++ K + + + I Sbjct 108 PTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKILDSGKIKFKNARPAAVI--- 164 Query 85 ASVLNKWQMNPYDRGSAFA--IGSDGLC 110 S + M YD+ S +A IG C Sbjct 165 ISPTRELAMQIYDQISKYAGSIGIKATC 192 >sp|A6RGE3|DBP2_AJECN ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP2 PE=3 SV=1 Length=542 Score = 149 bits (377), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 106/344 (31%), Positives = 169/344 (49%), Gaps = 60/344 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 197 DGPIVLVLAPTRELAVQIQTEITKFGK---SSRIRNTCVYGGVPKGPQIRDLTRGVEVCI 253 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ + Q+ D Q Sbjct 254 ATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI---VSQIRPD---RQTC 307 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNP--KTDRLWERLGK 461 + SAT DV++L++ +H V++ D S + +V V+ K DR+ + L Sbjct 308 MWSATWPK-DVRQLAQDFLHDYIQVNIGSMDLSANHRITQIVEIVSEFEKRDRMAKHLD- 365 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 R ++ +K + +IF TK D+ Sbjct 366 -------------------------------------RIMEANKHSKVLIFTGTKRVADD 388 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + F++Q G P + +HGD++ +ER L FK G ++ TDVA+RGID+ Sbjct 389 ITR-FLRQDGWP--------ALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDV 439 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +V+N P+ ++YVHRIGR GRA G AI+L T+ K Sbjct 440 RDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAK 483 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQA+ P+ L G DV+ AETGSGKT + +P I Sbjct 127 FDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 184 >sp|Q94A52|RH2_ARATH Eukaryotic initiation factor 4A-III homolog OS=Arabidopsis thaliana OX=3702 GN=EIF4A3 PE=1 SV=2 Length=408 Score = 146 bits (369), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 108/358 (30%), Positives = 167/358 (47%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA QT I+ + ++ IGG + + + LE+GV +V GTP Sbjct 105 QALILSPTRELATQTEKTIQAIGLH---ANIQAHACIGGNSVGEDIRKLEHGVHVVSGTP 161 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ L+LDE+D +LS+G+ D I ++ +P LQV + S Sbjct 162 GRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLP------PDLQVCLVS 215 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V Sbjct 216 ATL-PHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEK----------------- 257 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 258 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDYLSEKM- 294 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + H F+ +HGD ER + F+ GD R LI TDV ARGID+ V V Sbjct 295 --------RSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLV 346 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V ++ K+ + + Y+T++ E Sbjct 347 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDI-----EQYYSTQIDE 399 Score = 46.2 bits (108), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 22/72 (31%), Positives = 44/72 (61%), Gaps = 0/72 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F++MG+ ++ + V E + P+ IQ ++ IL G DV+ A++G+GKT ++ V Sbjct 34 ITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSV 93 Query 61 IQIVYETLKDQQ 72 Q+V + ++ Q Sbjct 94 CQVVDTSSREVQ 105 >sp|Q8LA13|RH11_ARATH DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana OX=3702 GN=RH11 PE=1 SV=1 Length=612 Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 109/360 (30%), Positives = 169/360 (47%), Gaps = 68/360 (19%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 I+K QH + ++ + P A+I+ P+RELA Q + K+F ++ ++ G Sbjct 213 IMKDQHVERPRGSRAVY----PFAVILSPTRELACQIHDEAKKFSYQT---GVKVVVAYG 265 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G QL LE G DI+V TPGRL+DL+ ++++ +RFL LDEAD +L G+ I Sbjct 266 GTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIR 325 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ Q+ + G R Q ++ SAT FP+ + D + + + V Sbjct 326 KIVEQM-DMPPRGVR-QTMLFSAT---------------FPSQIQRLAADFMSNYIFLAV 368 Query 446 VPVNPKTDRLWERL-------GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 V TD + +R+ +SH+ D +HA+ T Sbjct 369 GRVGSSTDLITQRVEFVQESDKRSHL-MDLLHAQRET----------------------- 404 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + K ++F TK D LE + ++F +HGDR ER+ L Sbjct 405 ----QDKQSLTLVFVETKRGADTLENWLCM---------NEFPATSIHGDRTQQEREVAL 451 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 FK G L+ TDVAARG+DI V +V+N LP++ +YVHRIGR GRA + G+A + Sbjct 452 RSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAF 511 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 4/69 (6%) Query 22 WLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ-EGKKGKTT 80 ++ PT +Q +IP++L D++ A+TGSGKT AF P+I + +KDQ E +G Sbjct 171 YVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGI---MKDQHVERPRGSRA 227 Query 81 IKTGASVLN 89 + A +L+ Sbjct 228 VYPFAVILS 236 >sp|O02494|IF4A_CRYPV Eukaryotic initiation factor 4A OS=Cryptosporidium parvum OX=5807 GN=EIF4-A PE=2 SV=1 Length=405 Score = 146 bits (368), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 112/396 (28%), Positives = 187/396 (47%), Gaps = 64/396 (16%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 P DG+ + +A G K+ A + + + NA + L++ P+RELA+Q Sbjct 64 PILDGYDTIGQAQSG-TGKTATFVIAALQKIDYSLNACQVLLLAPTRELAQQIQKVALAL 122 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 Y + LR +GG + RD ++ L++GV +VVGTPGR+ D++ G L + ++ +L Sbjct 123 GDYCE---LRCHACVGGTSVRDDMNKLKSGVHMVVGTPGRVFDMLDKGYLRVDNLKLFIL 179 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD +LS+G+ I+ + ++PQ +QV + SAT+ + ++ L+ + M P + Sbjct 180 DEADEMLSRGFKVQIHDIFKKLPQ------DVQVALFSATMPN-EILHLTTQFMRDPKRI 232 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 +K E+ + + V V KD W Sbjct 233 LVKQEELTLEGIRQFYVGVE----------------------KDE----------W---- 256 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K + + + + QAII+C T+ D L + + F+C +HGD Sbjct 257 ---KMDTLIDLYETLTIVQAIIYCNTRRRVDQLTKQM---------RERDFTCSSMHGDM 304 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 +R+ + +F+ G R LI TD+ ARGID+ V VIN LP + Y+HRIGR GR Sbjct 305 DQKDREVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPVSPETYIHRIGRSGRF 364 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 + G++I+ V + VC + YNT+++E Sbjct 365 GKKGVSINFVTDDD-----IVCLRDIERHYNTQIEE 395 >sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana OX=3702 GN=RH35 PE=2 SV=1 Length=591 Score = 149 bits (377), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 106/339 (31%), Positives = 161/339 (47%), Gaps = 66/339 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDN---PKLRELLIIGGVAARDQLSVLENGVDIV 343 P LIV PSRELA QT ++QF + P LR LL IGG+ R QL V++ GV IV Sbjct 223 PIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIV 282 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGRL D+++ K++L R+L LDEAD L+ G+ D I + + + Q Sbjct 283 VATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDHF------KSQRQT 336 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT+ PT + + ++ V V V V Sbjct 337 LLFSATM---------------PTKIQIFARSAL---VKPVTVNVG-------------- 364 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE---HKMDQAIIFCRTKIDCD 520 R GA + ++ E ++ +K E + + E +IFC K D D Sbjct 365 ------------RAGAANLDVIQE-VEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVD 411 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 ++ +Y + +G V +HG + +R+ + FK G L+ TDVA++G+D Sbjct 412 DIHEYLLLKG---------VEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLD 462 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + +VIN +P E +NYVHRIGR GR + G+A + + Sbjct 463 FPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFI 501 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/63 (37%), Positives = 36/63 (57%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + ++E + PT IQ + +P+IL G D++ A TGSGKT F +P+I I Sbjct 148 FKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMI 207 Query 64 VYE 66 + Sbjct 208 ALQ 210 >sp|A1DG51|DBP3_NEOFI ATP-dependent RNA helicase dbp3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp3 PE=3 SV=1 Length=503 Score = 148 bits (374), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 115/345 (33%), Positives = 163/345 (47%), Gaps = 63/345 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q + + +F +D +R I GGV +Q L+ IVV T Sbjct 160 PAAVIISPTRELAMQIYDQLSKFGASVD---IRVTCIYGGVKKDEQREALKTAA-IVVAT 215 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL + G ++L +V++LVLDEAD +L +G+ I + +P D KR Q ++ Sbjct 216 PGRLKDLQNDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIIRSMP----DSKR-QTVMF 270 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP----DTVHHVVVPVNP--KTDRLWERLG 460 +AT V+ L+ M V + G+ S + VV V P K RL + L Sbjct 271 TATWPP-SVRDLAATFMTSAVTVTIGGDPSADPRANTRIKQVVEVVKPQEKEARLVQLLN 329 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 +S +G D+ ++FC K + Sbjct 330 RSQ-----------------------------RGAAVC--------DKVLVFCLYKKEAV 352 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +E+ + F +HGD HER ++LE FK G L+ TDVAARG+D Sbjct 353 RVERLL---------RTKNFKVAGIHGDLNQHERFKSLEAFKTGAATVLVATDVAARGLD 403 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 I V VINVT P ++YVHRIGR GRA G AI+L TE +K Sbjct 404 IPSVKLVINVTFPLTVEDYVHRIGRTGRAGADGHAITLF-TETDK 447 Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (4%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTG 84 PT IQ+ + PL+ G DV+ AETGSGKT AF +P I+ + ++ K +++ + I Sbjct 108 PTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCIKKILDSGKVKRKHARPAAVI--- 164 Query 85 ASVLNKWQMNPYDRGSAFAIGSD 107 S + M YD+ S F D Sbjct 165 ISPTRELAMQIYDQLSKFGASVD 187 >sp|Q9VHP0|DDX3_DROME ATP-dependent RNA helicase bel OS=Drosophila melanogaster OX=7227 GN=bel PE=1 SV=1 Length=798 Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 105/347 (30%), Positives = 169/347 (49%), Gaps = 54/347 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+RELA Q ++ KK+ ++R ++ GG +Q+ L+ G ++V T Sbjct 379 PLGLVLAPTRELATQIF---EEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVAT 435 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+D+++ GK+ L +RFLVLDEAD +L G+ I R+ Q+ + G+R Q ++ Sbjct 436 PGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQL-NMPPTGQR-QTLMF 493 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT +++L+ + ++ + S + + + LW Sbjct 494 SATFPK-QIQELASDFLSNYIFLAVGRVGSTSENITQTI---------LW---------- 533 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQY 525 P+ S + +L ++R E+ D +IF TK D+LE++ Sbjct 534 ------------VYEPDKRSYLLDLLS---SIRDGPEYTKDSLTLIFVETKKGADSLEEF 578 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 Q +HGDR ER++ L F+ GD L+ T VAARG+DI V Sbjct 579 LYQ---------CNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVK 629 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 +VIN LP + + YVHRIGR GR +G+A S EK + ++CS Sbjct 630 HVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFF-NEKNR---NICS 672 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/66 (35%), Positives = 40/66 (61%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++ + I V + PT +Q +IP+I+ G D++ A+TGSGKT AF +P+ Sbjct 294 ITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPI 353 Query 61 IQIVYE 66 + +YE Sbjct 354 LNQMYE 359 >sp|Q5Z6G5|RH35B_ORYSJ DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0697200 PE=3 SV=1 Length=619 Score = 150 bits (378), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 110/336 (33%), Positives = 164/336 (49%), Gaps = 60/336 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDN---PKLRELLIIGGVAARDQLSVLENGVDIV 343 P LIV PSRELA QT I+ F + P++R LL IGGV R Q+ V++ GV IV Sbjct 250 PFGLIVCPSRELARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVHIV 309 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGRL DL+S K+NL R+L LDEAD L+ G+ D I + + + Q Sbjct 310 VATPGRLKDLLSKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF------KAQRQT 363 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT + EKI +F V ++V V R G ++ Sbjct 364 LLFSAT--------MPEKIQNFAKSA----------LVKPIIVNVG--------RAGAAN 397 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + DV E E +I+ Y + +++ ++FC K D D ++ Sbjct 398 L---DV---------IQEVEYVKEEARII---YLLECLQKTP-PPVLVFCEHKADVDYIQ 441 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 ++ + +G V +HG + ERK + FK + L+ TDVA++G+DI Sbjct 442 EFLLLKG---------VEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPD 492 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + +VIN +P E +NYVHRIGR GR + G+A + + Sbjct 493 IQHVINYDMPAEIENYVHRIGRTGRRGKTGVATTFI 528 Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust. Identities = 18/37 (49%), Positives = 25/37 (68%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQ + +P+ L G D++ A TGSGKT F +P+I Sbjct 196 PTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLI 232 >sp|B4F1V3|RHLB_PROMH ATP-dependent RNA helicase RhlB OS=Proteus mirabilis (strain HI4320) OX=529507 GN=rhlB PE=3 SV=1 Length=432 Score = 146 bits (369), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 109/339 (32%), Positives = 169/339 (50%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + + ++ L GG +QL VL NGVDIV+ Sbjct 83 NQPRALIMAPTRELAVQIYTDAQPLAQ---STGVKMGLAYGGDGYDEQLKVLNNGVDIVI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D V G +NL+ ++ +VLDEAD + G+ I + ++P +R+ ++ Sbjct 140 GTTGRLIDYVKQGHINLNAIQVVVLDEADRMYDLGFIKDIRWLFRRMPNA---AERMNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ P +V+++ E ++ + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNPEYVEVEPEQKTGFSIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E ++ IIF TK CD++ Sbjct 251 -------------------------------------IEEEWPERCIIFANTKHRCDDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + GH+ L GD +R + LE F +G++ L+ TDVAARG+ I Sbjct 274 AHLAAD-------GHRVG--LLTGDVPQKKRLRILEDFTQGNIDILVATDVAARGLHIPS 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA + G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGKSGNSISLACEE 363 Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++P+ + G D+ A+TG+GKT AF Sbjct 11 FSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGHDIAGQAQTGTGKTLAF 63 >sp|Q9LUW6|RH9_ARATH DEAD-box ATP-dependent RNA helicase 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH9 PE=1 SV=1 Length=610 Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 104/331 (31%), Positives = 163/331 (49%), Gaps = 61/331 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ L++ P+RELA Q K+F++ P L + + GG Q+ L G+D+ VGT Sbjct 191 PQCLVLAPTRELARQVE---KEFRE--SAPSLDTICLYGGTPIGQQMRELNYGIDVAVGT 245 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL+ G LNLS+V+F+VLDEAD +L G+++ + + ++P KR Q ++ Sbjct 246 PGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLP-----AKR-QSMMF 299 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ S+ ++ L++K ++ P +DL G+ +L + + I Sbjct 300 SATMPSW-IRSLTKKYLNNPLTIDLVGDSD----------------QKLADGITMYSIAA 342 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH-KMDQAIIFCRTKIDCDNLEQY 525 D P +KEH K + I+F +TK D D L Sbjct 343 DSYGRASIIGP----------------------LVKEHGKGGKCIVFTQTKRDADRLAFG 380 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + + C LHGD +R++ L F+ G+ L+ TDVAARG+D+ V Sbjct 381 LAK----------SYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVD 430 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 VI+ LP+ + +VHR GR GRA + G AI Sbjct 431 LVIHYELPNNTETFVHRTGRTGRAGKKGSAI 461 Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 38/61 (62%), Gaps = 4/61 (7%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 A +++G+ PEI +A++ ++ L P IQ + + G D++ A TG+GKT AF IP+ Sbjct 117 AIADLGISPEIVKALKGRGIEKLFP--IQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPI 174 Query 61 I 61 I Sbjct 175 I 175 >sp|Q4WH83|DBP3_ASPFU ATP-dependent RNA helicase dbp3 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp3 PE=3 SV=1 Length=503 Score = 147 bits (372), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 114/345 (33%), Positives = 159/345 (46%), Gaps = 63/345 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q + + +F +D +R I GGV +Q L+ IVV T Sbjct 160 PAAVIISPTRELAMQIYDQLSKFGASVD---IRVTCIYGGVKKDEQREALKTAA-IVVAT 215 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL G ++L +V++LVLDEAD +L +G+ I + P T Q ++ Sbjct 216 PGRLKDLKDDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIIRSTPDSTR-----QTVMF 270 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP----DTVHHVVVPVNP--KTDRLWERLG 460 +AT V+ L+ M V + G+ S + VV V P K RL + L Sbjct 271 TATWPP-SVRDLAASFMTSAVTVTIGGDPSADPRANTRIKQVVEVVKPQEKEARLVQLLS 329 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 +S R A D+ ++FC K + Sbjct 330 RSQ------------RGAAVG-------------------------DKVLVFCLYKKEAV 352 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +E+ + F +HGD HER ++LE FK G L+ TDVAARG+D Sbjct 353 RVERLL---------RSKNFKVAGIHGDLNQHERFKSLEAFKTGSATVLVATDVAARGLD 403 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 I V VINVT P ++YVHRIGR GRA G AI+L TE +K Sbjct 404 IPSVKLVINVTFPLTVEDYVHRIGRTGRAGADGHAITLF-TEADK 447 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (4%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTG 84 PT IQ+ + PL+ G DV+ AETGSGKT AF +P I+ + ++ K +++ + I Sbjct 108 PTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCIKKILDSGKVKRKHARPAAVI--- 164 Query 85 ASVLNKWQMNPYDRGSAFAIGSD 107 S + M YD+ S F D Sbjct 165 ISPTRELAMQIYDQLSKFGASVD 187 >sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP2 PE=3 SV=1 Length=544 Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 108/351 (31%), Positives = 167/351 (48%), Gaps = 61/351 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F K + ++R + GGV Q+ L G +IV+ Sbjct 182 DGPIVLVLAPTRELAVQIQKECSKFGK---SSRIRNTCVYGGVPRGQQIRELIRGAEIVI 238 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 239 ATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 292 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNP--KTDRLWERLGK 461 + SAT +V++L+ ++ P V + E + + +V V+ K DRL + L Sbjct 293 MWSATWPK-EVQQLARDYLNDPIQVQIGSLELAASHNITQLVEVVSEFEKRDRLVKHL-- 349 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 D ++D KE K+ +IF TK CD Sbjct 350 ------DTASQD----------------------------KESKI---LIFASTKRTCDE 372 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + Y Q G + + +HGD+ ER L F+ G+ ++ TDVAARGID+ Sbjct 373 ITSYLRQDG---------WPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDV 423 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 G+ +V+N +P ++YVHRIGR GRA G AIS + + + + S Sbjct 424 KGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLIS 474 Score = 39.7 bits (91), Expect = 0.10, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 109 ITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 168 Query 61 I 61 I Sbjct 169 I 169 >sp|Q1DTB3|FAL1_COCIM ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis (strain RS) OX=246410 GN=FAL1 PE=3 SV=2 Length=399 Score = 145 bits (365), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 106/340 (31%), Positives = 161/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q N I Y++ ++ IGG D + L++G +V GTP Sbjct 95 QALVLSPTRELATQIQNVIMAVGDYMN---VQCHACIGGTNVGDDIRKLDHGQHVVSGTP 151 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 152 GRVADMIRRRHLRTRHIKMLVLDEADDLLARGFREQIYDVYRYLPPAT------QVVVLS 205 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P + +K ++ + + + V Sbjct 206 ATL-PYDVLSMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------------- 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 248 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 280 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 281 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V +E ++ Sbjct 336 VINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRI 375 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ IQ+ +I I G D + A++G+GKT F+I ++Q Sbjct 26 TFDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQ 85 Query 63 IVYETLKDQQ 72 ++ L++ Q Sbjct 86 VIDTALRETQ 95 >sp|P42305|DBPA_BACSU ATP-dependent RNA helicase DbpA OS=Bacillus subtilis (strain 168) OX=224308 GN=dbpA PE=1 SV=2 Length=479 Score = 146 bits (369), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 156/339 (46%), Gaps = 65/339 (19%) Query 285 NAPKALIVEPSRELAEQT---LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD 341 N P+ALI+ P+RELA Q + NI +FK+ ++ + G + Q + L+ Sbjct 69 NKPQALILTPTRELAVQVKEDITNIGRFKR------IKATAVFGKSSFDKQKAELKQKSH 122 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 IVVGTPGR+ D + G L L ++ +LV+DEAD +L+ G+ + + + +P + Sbjct 123 IVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERT----- 177 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 ++ SATL D++KLS + M P +++K + H V+ V R Sbjct 178 -TMLFSATLPQ-DIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQV---------REEN 226 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 DV +N D IIFCRTK + Sbjct 227 KFSLLKDVLMTENP-------------------------------DSCIIFCRTKEHVNQ 255 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L G + C +HG +R + FK+G+ R+L+ TDVAARGIDI Sbjct 256 LTDELDDLG---------YPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDI 306 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 + VIN LP EK++YVHR GR GRA G AIS V Sbjct 307 ENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVT 345 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 0/63 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M+ F + +I +A+E + + PT +Q IP L D+++ ++TGSGKT +F IP+ Sbjct 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPL 60 Query 61 IQI 63 ++ Sbjct 61 CEL 63 >sp|Q75HJ0|RH37_ORYSJ DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica OX=39947 GN=PL10A PE=2 SV=1 Length=637 Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 110/336 (33%), Positives = 159/336 (47%), Gaps = 56/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+REL+ Q ++ +K+ +R ++ GG QL LE GV+I+V T Sbjct 253 PLALILSPTRELSVQIH---EEARKFAYQTGVRVVVAYGGAPIHQQLRELERGVEILVAT 309 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ +++L V++L LDEAD +L G+ I ++ Q+ + G R Q ++ Sbjct 310 PGRLMDLLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIVEQM-DMPPRGVR-QTMLF 367 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + D + D + V V TD + +R+ Sbjct 368 SAT---------------FPKEIQRMASDFLADYIFLAVGRVGSSTDLIAQRV------- 405 Query 467 DDVHAKDNTRPGANSPEMWSEAIK---ILKGEYAVRAIKEH-KMDQAIIFCRTKIDCDNL 522 E EA K ++ +A +A H K ++F TK D L Sbjct 406 ----------------EFVLEADKRSYLMDLLHAQKANGTHGKQALTLVFVETKRGADAL 449 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 E + G F +HGDR ER+ L FK G L+ TDVAARG+DI Sbjct 450 ENWLYTNG---------FPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIP 500 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V +VIN LP++ +YVHRIGR GRA + GLA + Sbjct 501 HVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAF 536 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 47/86 (55%), Gaps = 2/86 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + + + + ++ PT +Q +IP+ + G D++ A+TGSGKT AF P+I Sbjct 176 FAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISG 235 Query 64 VYETLKDQQEGKKGKTTIKTGASVLN 89 + + Q+ +G T A +L+ Sbjct 236 IMSSRPPQR--PRGSRTAYPLALILS 259 >sp|Q6CX73|FAL1_KLULA ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=FAL1 PE=3 SV=1 Length=398 Score = 144 bits (364), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 122/426 (29%), Positives = 187/426 (44%), Gaps = 74/426 (17%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDG--YI 266 D L F+ +K A F + LK L+ + +G F++P A+S+ G I Sbjct 8 DSKLKFKTSKKLKVSATFESMNLKPDLLRGIYFYG---FEYPSSIQSRAISQIISGKDVI 64 Query 267 VKSQHSGNAQVTQTKFLPNAP-------KALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 ++Q T T L A +AL++ P+RELA Q+ + I Y++ + Sbjct 65 AQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYLN---VT 121 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ- 378 GG A + + + +V GTPGR+ D++ LN+ + LVLDEAD LL + Sbjct 122 AHACTGGKALQQDIKKVSKNCQVVSGTPGRVLDMIKRQVLNVRNCKILVLDEADELLGET 181 Query 379 -GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 G+ I + ++P +QV+V SAT+ S D+ ++++K M P + +K ++ Sbjct 182 LGFKQQIYDIFTKLPPT------IQVVVVSATM-SKDILEITKKFMSDPVKILVKRDEIS 234 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 D + V V E W K + Sbjct 235 LDVIKQYYVDVEK--------------------------------EEW-------KFDTL 255 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 + Q +IFC T+ D L + Q FS +HGD K ER Q Sbjct 256 CDLYDSLTITQCVIFCNTRKKVDWLSRKLTQTN---------FSVSSMHGDMKQEERDQV 306 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 + F+ G R LI TDV ARGID+ + VIN +PD +NY+HRIGR GR R G+AI+ Sbjct 307 MNDFRSGKARVLISTDVWARGIDVQQISLVINYDIPDNLENYIHRIGRSGRFGRKGVAIN 366 Query 618 LVATEK 623 + E+ Sbjct 367 FITKEE 372 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/71 (31%), Positives = 41/71 (58%), Gaps = 0/71 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F M + P++ + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++ Sbjct 23 ATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGLL 82 Query 62 QIVYETLKDQQ 72 Q + K+ Q Sbjct 83 QAIDSKSKELQ 93 >sp|P33906|DEAD_KLEPN ATP-dependent RNA helicase DeaD OS=Klebsiella pneumoniae OX=573 GN=deaD PE=3 SV=3 Length=643 Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 106/346 (31%), Positives = 163/346 (47%), Gaps = 58/346 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 AP+ L++ P+RELA Q + +F K++ + + + GG QL L G IVV Sbjct 73 RAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNV--VALYGGQRYDVQLRALRQGPQIVV 130 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGRL D + G L+LS++ LVLDEAD +L G+ + + + QIP+ Q Sbjct 131 GTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH------QTA 184 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ +++++ + M P V Sbjct 185 LFSATMPEA-IRRITRRFMKEPQEVR---------------------------------- 209 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + + TRP S W+ A + K E VR ++ D AIIF RTK + + Sbjct 210 ----IQSSVTTRPDI-SQSYWT-AYGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAE 263 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G ++ L+GD R+Q LER K G + LI TDVAARG+D+ + Sbjct 264 ALERNG---------YNSAALNGDMNQALREQALERLKDGRLDILIATDVAARGLDVERI 314 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V+N +P + ++YVHRIGR GRA R G A+ V + ++ ++ Sbjct 315 SLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/69 (42%), Positives = 46/69 (67%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++ Sbjct 8 FADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSLPLLNN 67 Query 64 VYETLKDQQ 72 + L+ Q Sbjct 68 IDPELRAPQ 76 >sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica OX=39947 GN=PL10B PE=2 SV=1 Length=638 Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 111/360 (31%), Positives = 169/360 (47%), Gaps = 66/360 (18%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 I++S+ ++ ++T + P ALI+ P+REL+ Q ++ +K+ ++ ++ G Sbjct 231 IMRSRPPPRSRGSRTAY----PLALILSPTRELSVQIH---EEARKFAYQTGVKVVVAYG 283 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G QL LE GV+I+V TPGRL DL+ +++L +++L LDEAD +L G+ I Sbjct 284 GAPITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIR 343 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ Q+ + G+R Q ++ SAT FP + D + D + V Sbjct 344 KIVEQM-DMPPRGER-QTMLFSAT---------------FPKEIQRMASDFLADYIFLAV 386 Query 446 VPVNPKTDRLWERL------GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 V TD + +R+ K D +HA+ R Sbjct 387 GRVGSSTDLIVQRVEFVLDADKRSYLMDLLHAQ--------------------------R 420 Query 500 AIKEH-KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 A H K ++F TK D LE + G F +HGDR ER+ L Sbjct 421 ANGTHGKQALTLVFVETKRGADALENWLYNNG---------FPATSIHGDRTQQEREYAL 471 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 FK G L+ TDVAARG+DI V +VIN LP++ +YVHRIGR GRA + GLA + Sbjct 472 RSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAF 531 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+E+ + + + + ++ PT +Q +IP+ + G D++ A+TGSGKT AF P+I Sbjct 171 FAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPII 228 >sp|Q4P184|FAL1_USTMA ATP-dependent RNA helicase FAL1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=FAL1 PE=3 SV=1 Length=397 Score = 144 bits (364), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 122/430 (28%), Positives = 189/430 (44%), Gaps = 80/430 (19%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELK----FNFG-----EEEFKFPPKDGFVAL 258 N D LAFE H+K F A LK L+ +NF ++ P G + Sbjct 6 NAGDSKLAFESSEHVKVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVI 65 Query 259 SKAPDG------YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++A G + + S + + +T+ AL++ P+RELA Q + + Y Sbjct 66 AQAQSGTGKTATFSISMLQSIDTTLRETQ-------ALVLSPTRELAIQIQSVVLALGDY 118 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 ++ ++ IGG + + + L+ G IV GTPGR+ D++ L ++ L+LDE+ Sbjct 119 LN---VQCHACIGGTSVGEDIRKLDYGQHIVSGTPGRVYDMIRRRHLRTKNIKMLILDES 175 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D LL+ G+ D I ++ +P T QV++ SATL DV +++ K M P + +K Sbjct 176 DELLNMGFKDQIYDVYRYLPPST------QVVLLSATLPQ-DVLEMTSKFMTDPVRILVK 228 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 ++ + + V V E W L Sbjct 229 RDELTLEGIKQFFVAVEK--------------------------------EEWK--FDTL 254 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 Y I QA+IFC T+ D L K + F +HG+ + Sbjct 255 CDLYDTLTIT-----QAVIFCNTRRKVDWL---------SAKMKENNFQVSSMHGEMQQK 300 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER + + F++G R LI TDV ARGIDI + VIN LP ++NY+HRIGR GR R Sbjct 301 ERDEVMAEFRQGSSRVLITTDVWARGIDIANISLVINYDLPTNRENYIHRIGRSGRFGRK 360 Query 613 GLAISLVATE 622 G+AI+ V + Sbjct 361 GVAINFVTVD 370 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 0/71 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F MG+ ++ + + ++ P+ IQ +I I+ G DV+ A++G+GKT FSI ++ Sbjct 24 TTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISML 83 Query 62 QIVYETLKDQQ 72 Q + TL++ Q Sbjct 84 QSIDTTLRETQ 94 >sp|Q5VQL1|RH14_ORYSJ DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1 Length=708 Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/344 (29%), Positives = 159/344 (46%), Gaps = 63/344 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q + K+F + + ++ + + GG QL LE G DIVV Sbjct 251 DGPTVLVLSPTRELATQIQDEAKKFGR---SSRISSVCLYGGAPKGPQLRDLERGADIVV 307 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL+D++ +++L QV +LVLDEAD +L G+ I ++ Q+ + Q + Sbjct 308 ATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQV------QPKRQTL 361 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV---PDTVHHVVVPVNPKTDRLWERLGK 461 + +AT +V+K++ ++ P V++ D + +V V P+ R +++ + Sbjct 362 MFTATWPK-EVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILR 420 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 S PG+ + IIFC TK CD Sbjct 421 SQ------------EPGS----------------------------KIIIFCSTKRMCDQ 440 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + Q+ +HGD+ ER L F+ G L+ TDVAARG+DI Sbjct 441 LARNL----------ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDI 490 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + V+N P ++YVHRIGR GRA G+A + + K Sbjct 491 KDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSK 534 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/56 (43%), Positives = 34/56 (61%), Gaps = 0/56 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 F G PEI + V++ + PT IQA+S P+ L D++ A+TGSGKT + IP Sbjct 182 FQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIP 237 >sp|Q2GWJ5|FAL1_CHAGB ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=FAL1 PE=3 SV=1 Length=394 Score = 144 bits (363), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 117/424 (28%), Positives = 180/424 (42%), Gaps = 66/424 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D + F + F + LK + L+ + +G E V + K D Sbjct 12 DEKIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQA 71 Query 269 SQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G L +AL++ P+RELA Q + + Y++ ++ Sbjct 72 QSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMN---VQCHA 128 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + L+ G IV GTPGR+ D++ L ++ LVLDEAD LL+QG+ + Sbjct 129 CIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFRE 188 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 189 QIYDVYRYLPPAT------QVVVVSATL-PYDVLDMTTKFMTDPVRILVKRDELTLEGLK 241 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V E W L Y I Sbjct 242 QYFIAVEK--------------------------------EDWK--FDTLCDLYDTLTIT 267 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC T+ D L + F+ +HGD ER ++ F+ Sbjct 268 -----QAVIFCNTRRKVDWLTDKM---------REANFTVSSMHGDMPQKERDSIMQDFR 313 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V +E Sbjct 314 QGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSE 373 Query 623 KEKV 626 ++ Sbjct 374 DVRI 377 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 28 TFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQ 87 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 88 VIDTAVRETQ 97 >sp|Q0CL13|DBP3_ASPTN ATP-dependent RNA helicase dbp3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp3 PE=3 SV=1 Length=493 Score = 146 bits (369), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 112/345 (32%), Positives = 170/345 (49%), Gaps = 60/345 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P A+I+ P+RELA Q + +++F + + I GGV +Q VL+ +IV Sbjct 150 PYQPMAVIISPTRELAMQIHDQLQKFAGPVGA---KVACIFGGVRKDEQREVLKTA-NIV 205 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGRL DL + G ++L +VR+LVLDEAD +L +G+ I + +P + Q Sbjct 206 VATPGRLKDLQNDGSVDLGKVRYLVLDEADRMLDKGFEQDIKDIIQPMPV-----SKRQT 260 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ +AT V++L+ M P V + G+ S +P+ Sbjct 261 VMFTATWPPV-VRELASTFMSSPVTVTIGGDPSA-----------DPRA----------- 297 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGE-YAVRAIKEHK--MDQAIIFCRTKIDCD 520 NTR + E +K + E V+ +K+H+ ++ + FC K + Sbjct 298 ----------NTRI-----KQVVEVVKPHEKEGRLVQLLKQHQRGAEKVLAFCLYKKEAT 342 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +E++ +G F +HGD ER ++L+ FK G L+ TDVAARG+D Sbjct 343 RIERFLQSRG---------FKVAGIHGDLSQQERFRSLDAFKTGAATVLVATDVAARGLD 393 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 I V VINVT P ++YVHRIGR GRA G AI+L TE +K Sbjct 394 IPAVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLF-TETDK 437 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/37 (57%), Positives = 27/37 (73%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQ+ + PL+ GG DV+ AETGSGKT AF +P + Sbjct 101 PTSIQSATWPLLFGGRDVIGIAETGSGKTLAFGLPCL 137 >sp|Q8Y7M8|DBPA_LISMO ATP-dependent RNA helicase DbpA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=dbpA PE=2 SV=1 Length=470 Score = 145 bits (367), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 131/416 (31%), Positives = 181/416 (44%), Gaps = 108/416 (26%) Query 279 QTKFLPNAPKALIVEPSRELAEQT---LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 Q ++ N P+ALI+ P+RELA Q NI +FK+ ++ I G Q Sbjct 60 QVEWEENKPQALIIVPTRELAMQVKTECTNIGRFKR------VKAAAIYGQSPFAKQKLE 113 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L IVVGTPGRL D + G LN+ +V LVLDE D +LS G+ D + + +++P Sbjct 114 LSQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILSRLP--- 170 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K+ Q + SAT+ +++ L ++ P +++ E + P + HV + + K L Sbjct 171 ---KQRQNLFFSATMPE-EMQDLIKRYQDNPMVIEMASEKTNP--IFHVEMQTDNKEKTL 224 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 DV +N D AIIFC T Sbjct 225 -----------KDVLITENP-------------------------------DSAIIFCNT 242 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K D L D K + +HG + +R + ++ FK G RFLI TDVA Sbjct 243 KNQVDELTDLL-------DVKASK-----IHGGLRQEDRFRAMDDFKSGKSRFLIATDVA 290 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 RGID+ V VIN LP EK+NYVHRIGR GRA + G AIS V T Sbjct 291 GRGIDVDNVSLVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKT-------------- 336 Query 636 KGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP----DIKVPVDEFDGK 687 NE LL +IEE L+ TI + ++KV D F K Sbjct 337 ------------------NENPLLRDIEEMLDVTIEKKRKPTVIEVKVNEDAFRKK 374 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 39/61 (64%), Gaps = 1/61 (2%) Query 12 EIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI-QIVYETLKD 70 EI +A+ E+ + T +Q IP+ L G D++ ++TGSGKT AF+IP+ Q+ +E K Sbjct 9 EIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQVEWEENKP 68 Query 71 Q 71 Q Sbjct 69 Q 69 >sp|Q9P735|FAL1_NEUCR ATP-dependent RNA helicase fal-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=fal-1 PE=3 SV=2 Length=400 Score = 144 bits (363), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 120/426 (28%), Positives = 189/426 (44%), Gaps = 70/426 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D + F + F + LK + L+ + +G E V + K D I + Sbjct 11 DEKIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDT-IAQ 69 Query 269 SQH----SGNAQVTQTKFLPNAPK---ALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 +Q + ++ + + A + AL++ P+RELA Q + + Y++ ++ Sbjct 70 AQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMN---VQCH 126 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 IGG + + L+ G IV GTPGR+ D++ L ++ LVLDEAD LL+QG+ Sbjct 127 ACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFR 186 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + I ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 187 EQIYDVYRYLPPAT------QVVVVSATL-PYDVLDMTTKFMTDPVRILVKRDELTLEGL 239 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V E W L Y I Sbjct 240 KQYFIAVEK--------------------------------EDWK--FDTLCDLYDTLTI 265 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLER 560 QA+IFC T+ D L DK + F+ +HGD ER ++ Sbjct 266 T-----QAVIFCNTRRKVDWL----------TDKMREANFTVSSMHGDMPQKERDSIMQD 310 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F++G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V Sbjct 311 FRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVT 370 Query 621 TEKEKV 626 +E ++ Sbjct 371 SEDVRI 376 Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 27 TFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQ 86 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 87 VIDTAVRETQ 96 >sp|A5DWJ1|FAL1_LODEL ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=FAL1 PE=3 SV=1 Length=399 Score = 144 bits (363), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 104/333 (31%), Positives = 159/333 (48%), Gaps = 58/333 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q N IK Y++ ++ IGG + L+ G IV GTP Sbjct 96 QALVLSPTRELATQIQNVIKHLGDYMN---IQTYACIGGKNVGTDIKRLQQGQQIVSGTP 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L+ ++ L+LDEAD L ++G+ + I ++ +P +QV+V S Sbjct 153 GRVLDVIKRRNLSTRHIKMLILDEADELFTKGFKEQIYEIYKHLP------PGVQVVVVS 206 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL + +V +++ K P + +K E+ + + K D ++ L + Sbjct 207 ATL-THEVLEMTGKFTTDPVKILVKREEVSLSGIKQYYIQCE-KEDWKFDTLCDLY---- 260 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 DN + QA+IFC TKI + L Sbjct 261 -----DNL-----------------------------TITQAVIFCNTKIKVNWLTDQMR 286 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +Q F+ V +HGD K ER + F+ G+ R LI TDV ARGID+ + V Sbjct 287 KQN---------FTVVAMHGDMKQEERDAIMNDFRSGNSRVLISTDVWARGIDVQQISLV 337 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN LP +K+NY+HRIGR GR R G AI+L+ Sbjct 338 INYDLPLDKENYIHRIGRSGRFGRKGTAINLLT 370 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/62 (31%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + PE+ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI +++ Sbjct 27 TFESMRLKPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLE 86 Query 63 IV 64 ++ Sbjct 87 VL 88 >sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana OX=3702 GN=RH5 PE=1 SV=1 Length=537 Score = 146 bits (369), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 105/336 (31%), Positives = 170/336 (51%), Gaps = 68/336 (20%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+RELA Q + +++ + L+ + + GG + Q+S + +GVDIV+GT Sbjct 192 PTCLVLSPTRELAVQISDVLREAGEPCG---LKSICVYGGSSKGPQISAIRSGVDIVIGT 248 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ + L LS V F+VLDEAD +L G+ + + + +++ K Q+++ Sbjct 249 PGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFI------LSNTNKVRQMVMF 302 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH--- 463 SAT DV KL+++ M P+ + ++ V+ L +H Sbjct 303 SATW-PLDVHKLAQEFMD-------------PNPIKVIIGSVD---------LAANHDVM 339 Query 464 --IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM--DQAIIFCRTKIDC 519 I D A+D I +L+ K HK ++ ++F K++ Sbjct 340 QIIEVLDERARDQ------------RLIALLE--------KYHKSQKNRVLVFALYKVEA 379 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + LE++ Q+G + V +HG++ ER ++L FK+G L+ TDVAARG+ Sbjct 380 ERLERFLQQRG---------WKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGL 430 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 DI V VIN T P ++YVHRIGR GRA + G+A Sbjct 431 DIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVA 466 Score = 41.2 bits (95), Expect = 0.038, Method: Compositional matrix adjust. Identities = 23/52 (44%), Positives = 31/52 (60%), Gaps = 0/52 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKK 76 P+ IQ+ + P +L G D++ A+TGSGKT AF IP I V + K G K Sbjct 137 PSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSK 188 >sp|Q9LYJ9|RH46_ARATH DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 PE=2 SV=2 Length=645 Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 105/339 (31%), Positives = 160/339 (47%), Gaps = 57/339 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+RELA Q +F K + K+ + GG QL +E GVDIVV T Sbjct 234 PTILVLSPTRELATQIQVEALKFGK---SSKISCACLYGGAPKGPQLKEIERGVDIVVAT 290 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+D++ +++L QV +LVLDEAD +L G+ I ++ N++P + Q ++ Sbjct 291 PGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVP------TKRQTLMY 344 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 +AT +V+K++ ++ P V++ D + KS +T Sbjct 345 TATWPK-EVRKIAADLLVNPAQVNIGNVDEL--------------------VANKSITQT 383 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +V A E S +IL+ + I IIFC TK CD L + Sbjct 384 IEVLAPM---------EKHSRLEQILRSQEPGSKI--------IIFCSTKRMCDQLARNL 426 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + F +HGD+ ER L +F+ G L+ TDVAARG+D+ + Sbjct 427 TR----------TFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRV 476 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V+N P+ ++YVHRIGR GRA GLA + + K Sbjct 477 VVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAK 515 Score = 40.0 bits (92), Expect = 0.091, Method: Compositional matrix adjust. Identities = 20/59 (34%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +F G+ E+ + V + P+ IQA+S P+ + D++ A+TGSGKT + IP Sbjct 160 LMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP 218 >sp|Q5A4E2|DED1_CANAL ATP-dependent RNA helicase DED1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DED1 PE=3 SV=1 Length=672 Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 105/342 (31%), Positives = 164/342 (48%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+REL Q ++ KK+ +R ++ GG Q+ ++ G D++V T Sbjct 270 PTILVMAPTRELVSQIY---EESKKFSYRSWVRACVVYGGADIGQQMRNMDRGCDLLVAT 326 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL DL+ GK++L+ +R+LVLDEAD +L G+ I + + +P V K Q + Sbjct 327 PGRLKDLLDRGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAV----KDRQTL 382 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + D + D V V V ++ + +++ Sbjct 383 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKI----- 422 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 ++ +D+ E S + +L + E+ + I+F TK DNL Sbjct 423 ----LYVEDD--------EKKSVILDLL-------SANENGL--TIVFTETKRMADNLAD 461 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Y QG F +HGDR +ER++ L FK G L+ T VAARG+DI V Sbjct 462 YLYDQG---------FPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNV 512 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +VIN LP + +YVHRIGR GRA +G+A + + V Sbjct 513 SHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNV 554 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 27/41 (66%), Gaps = 0/41 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 PT +Q S+P++ G D++ A+TGSGKTG F PV+ Y Sbjct 209 PTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESY 249 >sp|Q4IF76|DBP2_GIBZE ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP2 PE=3 SV=2 Length=554 Score = 147 bits (370), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 104/341 (30%), Positives = 170/341 (50%), Gaps = 55/341 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +K+F + + ++R + GGV Q+ L GV++ + Sbjct 208 DGPIVLVLAPTRELAVQIQEEMKKFGR---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 264 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ I Q+ D Q + Sbjct 265 ATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI---IGQIRPD---RQTL 318 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +P V D + D + + + L +H Sbjct 319 MWSAT---------------WPKEVRALASDFLQDFIQVNIGSME---------LAANHR 354 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T V E+ +E K + + + E+K ++ +IF TK D + + Sbjct 355 ITQIV-------------EVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITR 401 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD++ +ER L++FK G ++ TDVA+RGID+ + Sbjct 402 -FLRQDGWP--------ALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNI 452 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +V+N P+ ++Y+HRIGR GRA MG AI+L T+ +K Sbjct 453 THVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQK 493 Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 32/59 (54%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 137 TFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSI 195 >sp|A4QU31|FAL1_PYRO7 ATP-dependent RNA helicase FAL1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=FAL1 PE=3 SV=1 Length=401 Score = 143 bits (361), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 118/423 (28%), Positives = 188/423 (44%), Gaps = 70/423 (17%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 + F + F + LK + L+ + +G E V + K D I ++Q Sbjct 15 MEFTTSKEVTVHPTFESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDT-IAQAQS 73 Query 272 ----SGNAQVTQTKFLPNAPK---ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + ++ + + A + AL++ P+RELA Q + + Y++ ++ I Sbjct 74 GTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMN---VQCHACI 130 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G IV GTPGR+ D++ L ++ LVLDEAD LL+QG+ + I Sbjct 131 GGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQI 190 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 191 YDVYRYLPPAT------QVVVVSATL-PYDVLDMTTKFMTDPVRILVKRDELTLEGLKQY 243 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + E W L Y I Sbjct 244 FIAIEK--------------------------------EDWK--FDTLCDLYDTLTIT-- 267 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKK 563 QA+IFC T+ D L DK + F+ +HGD ER ++ F++ Sbjct 268 ---QAVIFCNTRRKVDWL----------TDKMREANFTVSSMHGDMPQKERDSIMQDFRQ 314 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V +E Sbjct 315 GNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSED 374 Query 624 EKV 626 ++ Sbjct 375 VRI 377 Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust. Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I + G D + A++G+GKT FSI ++Q Sbjct 28 TFESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQ 87 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 88 VIDTAVRETQ 97 >sp|A5DE68|FAL1_PICGU ATP-dependent RNA helicase FAL1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=FAL1 PE=3 SV=2 Length=397 Score = 143 bits (361), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 105/335 (31%), Positives = 162/335 (48%), Gaps = 58/335 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q N I+ Y++ +R IGG + + L+ G I+ GTP Sbjct 94 QALVLSPTRELAQQIENVIEHLGDYMN---VRSHACIGGTQVGEDVKKLQQGQHIISGTP 150 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ + V+ LVLDEAD LL++G+ + I ++ +P QV+V S Sbjct 151 GRVLDMIKRRNIMPRHVKMLVLDEADELLTKGFKEQIYEIYKTLPAGA------QVVVVS 204 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL + +V +++ K P + +K +D + + K D ++ L + Sbjct 205 ATL-TPEVLEMTNKFTSDPVKILVKRDDVTLKGIKQYYIQCE-KEDWKFDTLCDLY---- 258 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 DN + QA+IFC TK + L Sbjct 259 -----DNL-----------------------------TITQAVIFCNTKAKVNWL----- 279 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 G +K + F+ +HGD K +R ++ F+ G R LI TDV ARGID+ V V Sbjct 280 ---AGQMRKSN-FTVAAMHGDMKQEDRDSIMKEFRSGSTRVLISTDVWARGIDVQQVSLV 335 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 IN LP +K+NYVHRIGR GR R G AI+L+ ++ Sbjct 336 INYDLPLDKENYVHRIGRSGRFGRKGTAINLLTSQ 370 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + PE+ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI ++ Sbjct 25 TFESMNLKPELLKGIYNYGFEAPSAIQSRAIMQIIRGRDTIAQAQSGTGKTATFSIGILS 84 Query 63 IVYETLKDQQ 72 + KD Q Sbjct 85 SIDTKSKDCQ 94 >sp|A6ZWD3|DBP1_YEAS7 ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP1 PE=3 SV=1 Length=617 Score = 147 bits (371), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 103/342 (30%), Positives = 162/342 (47%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+RELA Q ++ +K+ +R ++ GG +Q+ ++ G D++V T Sbjct 238 PSALVLAPTRELATQIF---EEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVAT 294 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL+DL+ GK++L+ +++LVLDEAD +L G+ I + + +P V + Q + Sbjct 295 PGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSV----ENRQTL 350 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + D + + + V V ++ + +R+ + Sbjct 351 MFSAT---------------FPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRI----L 391 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 DD+ K S + +L EHK +IF TK D L Sbjct 392 YVDDMDKK-------------SALLDLLSA--------EHK-GLTLIFVETKRMADQLTD 429 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ L FK L+ T VAARG+DI V Sbjct 430 FLIMQ---------NFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNV 480 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +VIN LP + +YVHRIGR GRA G+A S + + + Sbjct 481 THVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNI 522 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/55 (33%), Positives = 33/55 (60%), Gaps = 0/55 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 + + ++ + PT +Q SIP++ G D++ A+TGSGKTG F P+ ++ + Sbjct 165 LMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRS 219 >sp|P24784|DBP1_YEAST ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP1 PE=1 SV=2 Length=617 Score = 147 bits (370), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 103/342 (30%), Positives = 162/342 (47%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+RELA Q ++ +K+ +R ++ GG +Q+ ++ G D++V T Sbjct 238 PSALVLAPTRELATQIF---EEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVAT 294 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL+DL+ GK++L+ +++LVLDEAD +L G+ I + + +P V + Q + Sbjct 295 PGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSV----ENRQTL 350 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + D + + + V V ++ + +R+ + Sbjct 351 MFSAT---------------FPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRI----L 391 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 DD+ K S + +L EHK +IF TK D L Sbjct 392 YVDDMDKK-------------SALLDLLSA--------EHK-GLTLIFVETKRMADQLTD 429 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ L FK L+ T VAARG+DI V Sbjct 430 FLIMQ---------NFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNV 480 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +VIN LP + +YVHRIGR GRA G+A S + + + Sbjct 481 THVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNI 522 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/55 (33%), Positives = 33/55 (60%), Gaps = 0/55 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 + + ++ + PT +Q SIP++ G D++ A+TGSGKTG F P+ ++ + Sbjct 165 LMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRS 219 >sp|A5E1W4|DBP3_LODEL ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP3 PE=3 SV=2 Length=535 Score = 145 bits (367), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 102/344 (30%), Positives = 175/344 (51%), Gaps = 50/344 (15%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 L + P+RELA Q +N++ + D + + I GGV+ DQ+ + NG ++VV TPG Sbjct 198 VLCISPTRELALQIYDNLEDLTRGTD---VSCVAIYGGVSKDDQIKKIRNGANVVVATPG 254 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 RL DL++ G ++LS + +LVLDEAD +L +G+ + I + P + G+ Q ++ +A Sbjct 255 RLVDLINDGAVDLSSINYLVLDEADRMLEKGFEEDIKLIIGSTP---AQGR--QTLMFTA 309 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 T +V++L+ M+ P V + D + N + ++ E L DD Sbjct 310 TWPK-EVRELANNFMNQPVKVTIGDRDELS---------ANKRITQIVEVL-------DD 352 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 K+ + I +L+ +Y ++K+ ++F K + +E + Sbjct 353 KFQKE------------KKLINLLQ-KYQNTGNGDNKI---LVFALYKKEASRIESLLHR 396 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 ++F +HGD +R Q L+ FK G+ L+ TDVAARG+DI V YVI Sbjct 397 ---------NKFKVAAIHGDLSQQQRTQALQSFKSGECNLLLATDVAARGLDIPNVKYVI 447 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 N+T P ++YVHR+GR GRA + G+A + +++ + +C+ Sbjct 448 NLTFPLTIEDYVHRLGRTGRAGQTGIAHTFFTEDEKHLSGALCN 491 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQ+ S P +L G DV+ AETGSGKT AF +P I Sbjct 149 PTPIQSVSWPFLLDGKDVVGVAETGSGKTFAFGVPAI 185 >sp|A6QXC1|DBP3_AJECN ATP-dependent RNA helicase DBP3 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP3 PE=3 SV=1 Length=487 Score = 145 bits (365), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 108/338 (32%), Positives = 164/338 (49%), Gaps = 53/338 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL-IIGGVAARDQLSVLENGVDIVVGTP 347 A+I+ P+RELA Q + + +F P L I GG + DQ L+ ++V TP Sbjct 146 AVIITPTRELAMQIHDQLVKF-----TPNGVGLACIYGGASKDDQRRALKKA-SVIVATP 199 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL D S LNL +V++LVLDEAD +L +G+ I + + +P ++ Q ++ + Sbjct 200 GRLKDFHSDESLNLKKVKYLVLDEADRMLDKGFEQDIKDIVSAMPS----SRKRQTVMFT 255 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+KL+ M P V + G+ S + N + ++ E + Sbjct 256 ATW-PISVRKLATTFMKEPVTVTIGGDLSSD-------IRANTRIKQIVEVV-------- 299 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 +P + S + +G A MD+ ++FC K + +E++ Sbjct 300 --------KPENKESRLLSLLNQYQRGRNA--------MDKVLVFCLYKKEATRIERFIR 343 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G F +HGD ER +L+ FK G V L+ TDVAARG+DI V V Sbjct 344 SKG---------FKVAGIHGDMNQTERFNSLDAFKSGSVPVLVATDVAARGLDIPAVKLV 394 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +NVT P ++YVHRIGR GRA GLAI++ TE +K Sbjct 395 LNVTFPLTVEDYVHRIGRTGRAGSDGLAITMF-TENDK 431 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 38/124 (31%), Positives = 55/124 (44%), Gaps = 19/124 (15%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTG 84 PT IQ+ + P + G DV+ AETGSGKT AF +P I+ V E ++ + Sbjct 93 PTPIQSVTWPYLFAGRDVIGVAETGSGKTLAFGVPCIRKVLEI-------NASHSSFRIS 145 Query 85 ASVLN---KWQMNPYDRGSAFAIGSDGLCC---------QSREVKEWHGCRATKGLMKGK 132 A ++ + M +D+ F GL C Q R +K+ AT G +K Sbjct 146 AVIITPTRELAMQIHDQLVKFTPNGVGLACIYGGASKDDQRRALKKASVIVATPGRLKDF 205 Query 133 HYYE 136 H E Sbjct 206 HSDE 209 >sp|Q4IAA0|FAL1_GIBZE ATP-dependent RNA helicase FAL1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=FAL1 PE=3 SV=1 Length=401 Score = 143 bits (360), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 106/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + + Y++ ++ IGG + + L+ G IV GTP Sbjct 97 QALVLSPTRELATQIQSVVMALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHIVSGTP 153 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 154 GRVADMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRYLPPAT------QVVVVS 207 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P + +K ++ + + + V Sbjct 208 ATL-PYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------------- 249 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 250 ---------------EDWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 282 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HGD ER ++ F++G+ R LI TDV ARGID+ V Sbjct 283 -----TDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 337 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V TE ++ Sbjct 338 VINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDVRI 377 Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust. Identities = 17/70 (24%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I + G D + A++G+GKT FSI ++Q Sbjct 28 TFESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQ 87 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 88 VIDTAVRETQ 97 >sp|Q755A5|DBP3_EREGS ATP-dependent RNA helicase DBP3 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP3 PE=3 SV=1 Length=535 Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 114/349 (33%), Positives = 163/349 (47%), Gaps = 61/349 (17%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 K P K L++ P+RELA Q +N+ Q D L + GGV Q L+ Sbjct 189 KSTPRGVKCLVISPTRELASQIYDNLVQL---TDKVGLNCCCVYGGVQKDSQREQLKKA- 244 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 +VV TPGRL DL+ G L+ V++LVLDEAD +L +G+ + I R+ I + SD + Sbjct 245 QVVVATPGRLLDLIEEGSAKLAGVQYLVLDEADRMLEKGFEEDIKRI---IKETKSDVR- 300 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNP--KTDRLW 456 Q ++ +AT +V++L+ M P V + D S + VV ++P K RL Sbjct 301 -QTLMFTATWPK-EVRELASTFMRAPVKVSIGNRDELSANKRITQVVEVIDPFKKEKRLL 358 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 E L + + GA K D+ +IF K Sbjct 359 ELLKQY-------------QSGAK------------------------KNDKVLIFALYK 381 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + +E+ G ++ +HGD +R Q L FK G L+ TDVAA Sbjct 382 KEASRVERNLKYNG---------YNVAAIHGDLSQQQRTQALSEFKAGTANLLLATDVAA 432 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 RG+DI V VIN+T P ++YVHRIGR GRA G+A +L TE+EK Sbjct 433 RGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGATGVAHTLF-TEQEK 480 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS + + I + + + PT IQA S P +L G DV+ AETGSGKT AF +P Sbjct 124 LLSFSHLNLHSAIQKEISKFPK--PTPIQAVSWPYLLAGKDVIGVAETGSGKTFAFGVPA 181 Query 61 I 61 I Sbjct 182 I 182 >sp|P57453|DEAD_BUCAI ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=deaD PE=3 SV=1 Length=601 Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 106/346 (31%), Positives = 158/346 (46%), Gaps = 61/346 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ L++ P+RELA Q F KY+ + L + GG QL L G IVVG Sbjct 74 APQILVLAPTRELAVQVAEAFSDFSKYMIG--IHVLPLYGGQRYELQLRALRQGPQIVVG 131 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D + G LNLS + LVLDEAD +L G+ + + + QIP K Q + Sbjct 132 TPGRLLDHLKRGTLNLSNLHGLVLDEADEMLRMGFIEDVETIMAQIP------KEHQTAL 185 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT+ ++++S++ M P + ++ + PD + KTD L Sbjct 186 FSATMPE-AIRRISKRFMRNPKEIKIQSNITTRPDIKQSYWMVYGRKTDAL--------- 235 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +R ++ IIF RTK + + Sbjct 236 ---------------------------------IRFLEAEDFSATIIFVRTKNATLEVSE 262 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G ++ L+GD R+Q LER K G + LI TDVAARG+D+ + Sbjct 263 ALERNG---------YNSAALNGDMNQALREQTLERLKNGRLDILIATDVAARGLDVDRI 313 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 +VIN +P + ++YVHRIGR GRA R G A+ V + ++ ++ Sbjct 314 SFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 359 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/71 (48%), Positives = 48/71 (68%), Gaps = 0/71 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + FS +G+ P I Q++ EM ++ P+ IQA IPL+L G DVL A+TGSGKT AFS+P++ Sbjct 6 STFSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLL 65 Query 62 QIVYETLKDQQ 72 + LK Q Sbjct 66 HNLNINLKAPQ 76 >sp|A3GFV3|FAL1_PICST ATP-dependent RNA helicase FAL1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=FAL1 PE=3 SV=1 Length=399 Score = 142 bits (359), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 114/360 (32%), Positives = 175/360 (49%), Gaps = 67/360 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q N +K Y++ + IGG D + L+ G IV GTP Sbjct 96 QALILSPTRELAVQIQNVVKHLGDYMN---IHTHACIGGTHVGDDIKKLKQGQQIVSGTP 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D+V +L+ ++ L+LDEAD L ++G+ + I ++ +P +QV+V S Sbjct 153 GRVVDMVKRQQLSTRNIKMLILDEADELFTKGFKEQIYEVYKYLP------PSVQVVVVS 206 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL-WERLGKSHIRT 466 ATL S +V +++ K P V + K D++ E + + H++ Sbjct 207 ATL-SREVLEMTNKFTTDP-------------------VKILVKRDQITLEGIKQYHVQC 246 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + E W K + + QA+IFC TK+ + L Sbjct 247 E--------------KEDW-------KFDTLCDLYDNLTITQAVIFCNTKLKVNWLTDQM 285 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +Q F+ V +HGD K ER + F+ G+ R LI TDV ARGID+ V Sbjct 286 RKQN---------FTVVSMHGDMKQDERDSIMNDFRTGNSRVLISTDVWARGIDVQQVSL 336 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG-KGCYNTRLKE 645 VIN LP +K+NY+HRIGR GR R G+AI+L+ E V + R + Y+T+++E Sbjct 337 VINYDLPTDKENYIHRIGRSGRFGRKGVAINLITKED------VATLRDFEKYYSTKIRE 390 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 0/71 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F M + P++ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI ++ Sbjct 26 ATFESMNLKPDLLKGIYGYGFEAPSAIQSRAIMQIINGRDTIAQAQSGTGKTATFSIGML 85 Query 62 QIVYETLKDQQ 72 Q + KD Q Sbjct 86 QAIDTNAKDCQ 96 >sp|A5DQS0|DED1_PICGU ATP-dependent RNA helicase DED1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DED1 PE=3 SV=3 Length=637 Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/342 (30%), Positives = 159/342 (46%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q K+F +R ++ GG Q+ L+ G D++V T Sbjct 253 PTALVMAPTRELVSQIFEEAKKFSY---RSWVRPCVVYGGADIGTQIRNLDRGCDLLVAT 309 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL DL+ G+++LS +++LVLDEAD +L G+ I + + +P V S Q + Sbjct 310 PGRLKDLLERGRVSLSNIKYLVLDEADRMLDMGFEPQIRHIVQECDMPGVES----RQTL 365 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + D + D + V V ++ + +++ Sbjct 366 MFSAT---------------FPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKV----- 405 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 ++ +D+ E S + +L + IIF TK DNL Sbjct 406 ----LYVEDD--------EKKSVLLDLLSA---------NDNGLTIIFTETKRMADNLAD 444 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + QG F +HGDR +ER++ L FK G L+ T VAARG+DI V Sbjct 445 FLYDQG---------FPATAIHGDRSQYEREKALAAFKSGTAPILVATAVAARGLDIPNV 495 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +V+N LP + +YVHRIGR GRA +G+A + V Sbjct 496 SHVVNYDLPGDIDDYVHRIGRTGRAGNVGIATAFFNRNNRNV 537 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 0/65 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++AF+ + P I + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 168 ISAFTAPPLDPLIVENIKLSRFTKPTPVQKYSVPIVASGRDLMACAQTGSGKTGGFLFPV 227 Query 61 IQIVY 65 + Y Sbjct 228 LSESY 232 >sp|Q7SBC6|DBP2_NEUCR ATP-dependent RNA helicase dbp2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-1 PE=3 SV=2 Length=562 Score = 145 bits (367), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 102/341 (30%), Positives = 169/341 (50%), Gaps = 53/341 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 204 DGPIVLILAPTRELAVQIQQEISKFGK---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 260 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ I Q+ D Q + Sbjct 261 ATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI---IGQIRPD---RQTL 314 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V+ L+ + D + + + + N + ++ E + +S Sbjct 315 MWSATWPK-EVRNLAADFL----------TDFIQVNIGSMDLAANHRITQIVEVVSESEK 363 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R M KI++G ++ +IF TK D++ + Sbjct 364 RD----------------RMIKHLEKIMEGR--------ENQNKILIFTGTKRVADDITR 399 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD++ +ER L++FK G ++ TDVA+RGID+ + Sbjct 400 -FLRQDGWP--------ALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNI 450 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +V+N P+ ++Y+HRIGR GRA G AI+ T+ K Sbjct 451 THVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSK 491 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 134 FDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 191 >sp|Q8XA87|DEAD_ECO57 ATP-dependent RNA helicase DeaD OS=Escherichia coli O157:H7 OX=83334 GN=deaD PE=3 SV=3 Length=629 Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 105/345 (30%), Positives = 161/345 (47%), Gaps = 58/345 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ L++ P+RELA Q + F K++ + + + GG QL L G IVVG Sbjct 74 APQILVLAPTRELAVQVAEAMTDFSKHMRGVNV--VALYGGQRYDVQLRALRQGPQIVVG 131 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D + G L+LS++ LVLDEAD +L G+ + + + QIP+ Q + Sbjct 132 TPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH------QTAL 185 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ +++++ + M P V Sbjct 186 FSATMPEA-IRRITRRFMKEPQEVR----------------------------------- 209 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + + TRP S W+ + K E VR ++ D AIIF RTK + + Sbjct 210 ---IQSSVTTRPDI-SQSYWT-VWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEA 264 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G ++ L+GD R+Q LER K G + LI TDVAARG+D+ + Sbjct 265 LERNG---------YNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERIS 315 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V+N +P + ++YVHRIGR GRA R G A+ V + ++ ++ Sbjct 316 LVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 47/69 (68%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++Q Sbjct 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67 Query 64 VYETLKDQQ 72 + LK Q Sbjct 68 LDPELKAPQ 76 >sp|Q9SQV1|RH40_ARATH DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana OX=3702 GN=RH40 PE=2 SV=1 Length=1088 Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 104/336 (31%), Positives = 156/336 (46%), Gaps = 61/336 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P LI+ P+RELA Q + +F + + ++ + GG QL LE G DIVV Sbjct 506 NGPTVLILAPTRELATQIQDEALRFGR---SSRISCTCLYGGAPKGPQLKELERGADIVV 562 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL+D++ ++ QV LVLDEAD +L G+ I ++ N+IP R Q + Sbjct 563 ATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIP------PRRQTL 616 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT +V+K++ ++ P V++ Sbjct 617 MYTATWPK-EVRKIASDLLVNPVQVNIG-------------------------------- 643 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI--KEHKMDQAIIFCRTKIDCDNL 522 R D++ A + E + ++ E + I + + + IIFC TK CD+L Sbjct 644 RVDELAANKAI-------TQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHL 696 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + G F V +HGD+ ER L +F+ G LI TDVAARG+DI Sbjct 697 ARSV----------GRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIK 746 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + VIN P ++YVHRIGR GRA G+A + Sbjct 747 DIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTF 782 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/71 (34%), Positives = 38/71 (54%), Gaps = 0/71 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F G+ PEI + + + PT IQA++ P+ L D++ A+TGSGKT + IP + Sbjct 437 FESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFIL 496 Query 64 VYETLKDQQEG 74 + D + G Sbjct 497 LRHCRNDSRNG 507 >sp|G0SFM2|DBP2_CHATD ATP-dependent RNA helicase DBP2 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) OX=759272 GN=DBP2 PE=3 SV=2 Length=556 Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 106/345 (31%), Positives = 169/345 (49%), Gaps = 61/345 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q I +F K + ++R I GGV Q+ L+ GV++ + Sbjct 201 DGPIVLVLAPTRELAVQIQQEINKFGK---SSRIRNTCIYGGVPKGPQIRDLQRGVEVCI 257 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ I Q+ D Q + Sbjct 258 ATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI---ISQIRPD---RQTL 311 Query 405 VCSAT----LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 + SAT + + L++ I +DL + V V+ + K DRL + L Sbjct 312 MWSATWPKEVRNLAADFLTDFIQVNIGSLDLAANHRITQIVE--VISESEKRDRLIKHLE 369 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K + ++D ++ +IF TK D Sbjct 370 KI------MDSRDT-------------------------------QNKCLIFVGTKRVAD 392 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 ++ + F++Q G P + +HGD++ +ER L++FK G ++ TDVA+RGID Sbjct 393 DITR-FLRQDGWP--------ALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGID 443 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + + +VIN P+ ++Y+HRIGR GRA G AI+ TE K Sbjct 444 VRNITHVINYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENAK 488 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQA+ P+ L G DV+ AETGSGKT + +P I Sbjct 131 FDEAGFPRYVMDEVKAQGFPAPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 188 >sp|Q8K9H6|DEAD_BUCAP ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=deaD PE=3 SV=1 Length=601 Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 106/346 (31%), Positives = 159/346 (46%), Gaps = 61/346 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ L++ P+RELA Q F KYI + L + GG QL L G IVVG Sbjct 74 APQILVLAPTRELAVQVAEAFSDFSKYIMG--IHVLPLYGGQRYEVQLRALRQGPQIVVG 131 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D + G LNLS + LVLDEAD +L G+ + + + +QIP K Q + Sbjct 132 TPGRLLDHLKRGTLNLSNLYALVLDEADEMLRMGFIEDVETIMSQIP------KEHQTAL 185 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT+ ++++S++ M P + ++ + PD + KTD L Sbjct 186 FSATMPE-AIRRISKRFMKNPQEIKIQSNITTRPDIKQSYWMVYGRKTDAL--------- 235 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +R ++ IIF +TK + + Sbjct 236 ---------------------------------IRFLEVEDFSATIIFVKTKNATLEVSE 262 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G ++ L+GD R+Q LER K G + LI TDVAARG+D+ + Sbjct 263 ALERNG---------YNSAALNGDMNQALREQTLERLKSGRLDILIATDVAARGLDVDRI 313 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 +VIN +P + ++YVHRIGR GRA R G A+ V + ++ ++ Sbjct 314 SFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 359 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 48/71 (68%), Gaps = 0/71 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + FS +G+ P I +++ +M ++ P+ IQA IPL+L G DVL A+TGSGKT AFS+P++ Sbjct 6 STFSFLGLNPFIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLL 65 Query 62 QIVYETLKDQQ 72 + LK Q Sbjct 66 HNLNINLKAPQ 76 >sp|Q8Y8N0|CSHA_LISMO ATP-dependent RNA helicase CshA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=cshA PE=2 SV=1 Length=520 Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/335 (32%), Positives = 161/335 (48%), Gaps = 59/335 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA Q + +K D +R L + GG Q+ L+ IVV Sbjct 69 NNVQALIIAPTRELAIQVSEEL--YKLSYDK-HVRVLAVYGGSDISRQIRSLKKNPQIVV 125 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ D ++ L L V LVLDEAD +L+ G+ D I + ++P Q + Sbjct 126 GTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEVP------AERQTL 179 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ ++++ E+ MH P + +K ++ + V V+ K ++ L Sbjct 180 LFSATMPD-PIRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEKEK--FDVLS---- 232 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R DV A PE+ AI+F RTK D L + Sbjct 233 RLLDVQA----------PEL------------------------AIVFGRTKRRVDELSR 258 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 +G + +HGD +R L +FK+G + L+ TDVAARG+DI GV Sbjct 259 ALDMRG---------YVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVATDVAARGLDISGV 309 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++YVHRIGR GRA + G+AI+ V Sbjct 310 THVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFV 344 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 40/61 (66%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M FSE G+ +I ++V M + T IQ ++IPL L G D++ A+TG+GKT AF +P+ Sbjct 1 MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLEGKDLIGQAQTGTGKTAAFGLPM 60 Query 61 I 61 I Sbjct 61 I 61 >sp|P41380|IF4A3_NICPL Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1 Length=391 Score = 142 bits (358), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 108/370 (29%), Positives = 173/370 (47%), Gaps = 65/370 (18%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 Q+ TK + +ALI+ P+RELA QT I YI+ ++ IGG + + + Sbjct 78 QIVDTK--SSEVQALILSPTRELAAQTEKVILAIGDYIN---VQAHACIGGKSVGEDIRK 132 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 LE+GV +V GTPGR+ D++ L ++ L+LDE+D +LS+G+ D I ++ +P Sbjct 133 LEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDEMLSRGFKDQIYDVYRYLP--- 189 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 LQV++ SATL + ++ +++ K M P + +K ++ + + V V Sbjct 190 ---PELQVVLISATLPN-EILEITSKFMTDPVRILVKRDELTLEGIKQFFVAVEK----- 240 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 E W K + + QA+IFC T Sbjct 241 ---------------------------EEW-------KFDTLCDLYDTLTITQAVIFCNT 266 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K D L + + F+ +HGD ER + F+ G R LI TDV Sbjct 267 KRKVDWLTSKM---------RENNFTVSSMHGDMPQKERDAIMAEFRGGTTRVLITTDVW 317 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 ARG+D+ V VIN LP+ ++ Y+HRIGR GR R G+AI+ V ++ K+ + Sbjct 318 ARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDI----- 372 Query 636 KGCYNTRLKE 645 + Y+T++ E Sbjct 373 EQYYSTQIDE 382 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +A+F+EMG+ ++ + V + + P+ IQ ++ I+ G DV+ A++G+GKT ++ V Sbjct 17 IASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIALTV 76 Query 61 IQIV 64 QIV Sbjct 77 CQIV 80 >sp|Q4IJH1|DBP3_GIBZE ATP-dependent RNA helicase DBP3 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP3 PE=3 SV=1 Length=581 Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/347 (30%), Positives = 162/347 (47%), Gaps = 66/347 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 KA++V P+RELA QT +Q +++ + + GG + DQ ++L G DI+V TP Sbjct 232 KAVVVSPTRELAMQTY---EQMASVAALNRMKCVCLYGGASKDDQRNLLNRGADIIVATP 288 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL D +S G ++LS F VLDEAD +L +G+ + I + + P Sbjct 289 GRLKDFMSDGTVDLSHSAFAVLDEADRMLDKGFEEDIKMILSSCPP-------------- 334 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ++ + +M TW P +V + ++ G Sbjct 335 --------REKRQTLMFTATW---------PQSVQTLAATFMVSPVKIAIGSGGKETAGG 377 Query 468 DVHAKDNTRPGANSPEMWSEAIKIL----KGEYAVRAIKEH-----KMDQAIIFCRTKID 518 V + N R S+++++L K + +KEH K D+ ++FC K + Sbjct 378 AVELQANAR--------ISQSVEVLEPRGKEFRLLEVLKEHQQGSKKNDRILVFCLYKKE 429 Query 519 CDNLEQYFIQQG---GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 +E + ++G GG +HGD + +R ++LE FK G L+ TDVA Sbjct 430 ATRIENFLSRKGIRVGG------------IHGDLRQEQRTRSLEAFKSGQTPVLVATDVA 477 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 ARG+DI V VINVT P ++YVHRIGR GRA + G AI+ E Sbjct 478 ARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGKTGQAITFFTVE 524 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/44 (48%), Positives = 30/44 (68%), Gaps = 0/44 (0%) Query 21 DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 ++ PT IQ+ S P L G DV+ AETGSGKT AF++P ++ + Sbjct 180 NYKAPTPIQSASWPFTLSGRDVIGVAETGSGKTMAFALPCVEAI 223 >sp|P0A9P8|DEAD_SHIFL ATP-dependent RNA helicase DeaD OS=Shigella flexneri OX=623 GN=deaD PE=3 SV=2 Length=629 Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/345 (30%), Positives = 161/345 (47%), Gaps = 58/345 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ L++ P+RELA Q + F K++ + + + GG QL L G IVVG Sbjct 74 APQILVLAPTRELAVQVAEAMTDFSKHMRGVNV--VALYGGQRYDVQLRALRQGPQIVVG 131 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D + G L+LS++ LVLDEAD +L G+ + + + QIP+ Q + Sbjct 132 TPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH------QTAL 185 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ +++++ + M P V Sbjct 186 FSATMPEA-IRRITRRFMKEPQEVR----------------------------------- 209 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + + TRP S W+ + K E VR ++ D AIIF RTK + + Sbjct 210 ---IQSSVTTRPDI-SQSYWT-VWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEA 264 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G ++ L+GD R+Q LER K G + LI TDVAARG+D+ + Sbjct 265 LERNG---------YNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERIS 315 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V+N +P + ++YVHRIGR GRA R G A+ V + ++ ++ Sbjct 316 LVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 47/69 (68%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++Q Sbjct 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67 Query 64 VYETLKDQQ 72 + LK Q Sbjct 68 LDPELKAPQ 76 >sp|P0A9P6|DEAD_ECOLI ATP-dependent RNA helicase DeaD OS=Escherichia coli (strain K12) OX=83333 GN=deaD PE=1 SV=2 Length=629 Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/345 (30%), Positives = 161/345 (47%), Gaps = 58/345 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ L++ P+RELA Q + F K++ + + + GG QL L G IVVG Sbjct 74 APQILVLAPTRELAVQVAEAMTDFSKHMRGVNV--VALYGGQRYDVQLRALRQGPQIVVG 131 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D + G L+LS++ LVLDEAD +L G+ + + + QIP+ Q + Sbjct 132 TPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH------QTAL 185 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ +++++ + M P V Sbjct 186 FSATMPEA-IRRITRRFMKEPQEVR----------------------------------- 209 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + + TRP S W+ + K E VR ++ D AIIF RTK + + Sbjct 210 ---IQSSVTTRPDI-SQSYWT-VWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEA 264 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G ++ L+GD R+Q LER K G + LI TDVAARG+D+ + Sbjct 265 LERNG---------YNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERIS 315 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V+N +P + ++YVHRIGR GRA R G A+ V + ++ ++ Sbjct 316 LVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 47/69 (68%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++Q Sbjct 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67 Query 64 VYETLKDQQ 72 + LK Q Sbjct 68 LDPELKAPQ 76 >sp|P0A9P7|DEAD_ECOL6 ATP-dependent RNA helicase DeaD OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=deaD PE=3 SV=2 Length=629 Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/345 (30%), Positives = 161/345 (47%), Gaps = 58/345 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ L++ P+RELA Q + F K++ + + + GG QL L G IVVG Sbjct 74 APQILVLAPTRELAVQVAEAMTDFSKHMRGVNV--VALYGGQRYDVQLRALRQGPQIVVG 131 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D + G L+LS++ LVLDEAD +L G+ + + + QIP+ Q + Sbjct 132 TPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH------QTAL 185 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ +++++ + M P V Sbjct 186 FSATMPEA-IRRITRRFMKEPQEVR----------------------------------- 209 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + + TRP S W+ + K E VR ++ D AIIF RTK + + Sbjct 210 ---IQSSVTTRPDI-SQSYWT-VWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEA 264 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G ++ L+GD R+Q LER K G + LI TDVAARG+D+ + Sbjct 265 LERNG---------YNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERIS 315 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V+N +P + ++YVHRIGR GRA R G A+ V + ++ ++ Sbjct 316 LVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI 360 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 47/69 (68%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++Q Sbjct 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQN 67 Query 64 VYETLKDQQ 72 + LK Q Sbjct 68 LDPELKAPQ 76 >sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159900 PE=2 SV=1 Length=1049 Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/347 (31%), Positives = 167/347 (48%), Gaps = 67/347 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+REL Q ++IK+F K + + + I GG Q+S L+ G +IVV Sbjct 496 DGPIGLIMAPTRELVVQIHSDIKKFSKALG---INCVAIYGGSGVAQQISELKRGAEIVV 552 Query 345 GTPGRLDDLV--STGKL-NLSQVRFLVLDEADGLLSQGYSDFINRM-HNQIPQVTSDGKR 400 TPGR+ D++ S+GK+ NL +V FLV+DEAD + G+ I R+ N P Sbjct 553 CTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPD------- 605 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV--VPVNPKTDRLWER 458 Q ++ SAT V+ L+ K++ P + + G V + +V P N + RL E Sbjct 606 RQTVLFSATFPR-QVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPENERFFRLLEL 664 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 LG+ W + KIL +F ++ Sbjct 665 LGE-----------------------WFDKGKIL------------------VFVHSQDK 683 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 CD+L + Q H + C+ LHG + +R+ L FK LI T VAARG Sbjct 684 CDSLLKDLFQ---------HGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSVAARG 734 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +D+ + V+N +P+ ++YVHR+GR GRA R G A++ ++ E+E+ Sbjct 735 LDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEER 781 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/66 (35%), Positives = 43/66 (65%), Gaps = 4/66 (6%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 + G+ ++ ++++ + P IQA+++P+I+ G D + A+TGSGKT AF +P+++ V Sbjct 428 QSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHV- 486 Query 66 ETLKDQ 71 KDQ Sbjct 487 ---KDQ 489 >sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DED1 PE=3 SV=1 Length=604 Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/342 (31%), Positives = 160/342 (47%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q + + KK+ ++ ++ GG +QL +E G D++V T Sbjct 226 PTAVIMAPTRELATQIFD---EAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVAT 282 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ GK++L+ V++LVLDEAD +L G+ I + +T G+R Q ++ Sbjct 283 PGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDC-DMTPVGER-QTLMF 340 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV--NPKTDRLWERLGKSHI 464 SAT + D++ L+ + ++ + S + + V+ V K L + L S Sbjct 341 SATFPA-DIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSAS-- 397 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 TD + +IF TK D L Sbjct 398 -TDGL---------------------------------------TLIFVETKRMADQLTD 417 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ L F+ G L+ T VAARG+DI V Sbjct 418 FLIMQ---------NFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNV 468 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +VIN LP + +YVHRIGR GRA GLA + +E + Sbjct 469 THVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNI 510 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/53 (40%), Positives = 32/53 (60%), Gaps = 0/53 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 PT +Q S+P++ G D++ A+TGSGKTG F PV+ ++T Q +G Sbjct 165 PTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQG 217 >sp|A7E449|DBP2_SCLS1 ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp2 PE=3 SV=1 Length=572 Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 106/341 (31%), Positives = 164/341 (48%), Gaps = 55/341 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 221 DGPIVLVLAPTRELAVQIQQEITKFGK---SSRIRNTCVYGGVPKGGQIRDLAKGVEVCI 277 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ QI Q Sbjct 278 ATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQI------RPDRQTC 331 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +P V D + D + + + L +H Sbjct 332 MWSAT---------------WPKEVRALASDYLNDFIQVNIGSLE---------LSANHR 367 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T V E+ SE K K + I E K ++ +IF TK D++ + Sbjct 368 ITQIV-------------EVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITR 414 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD++ +ER L FK G ++ TDVA+RGID+ + Sbjct 415 -FLRQDGWP--------ALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNI 465 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +V N P+ ++Y+HRIGR GRA + G AI+L T+ +K Sbjct 466 THVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQK 506 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 32/59 (54%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 150 TFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 208 >sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DED1 PE=1 SV=2 Length=604 Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/342 (31%), Positives = 160/342 (47%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q + + KK+ ++ ++ GG +QL +E G D++V T Sbjct 226 PTAVIMAPTRELATQIFD---EAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVAT 282 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ GK++L+ V++LVLDEAD +L G+ I + +T G+R Q ++ Sbjct 283 PGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDC-DMTPVGER-QTLMF 340 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV--NPKTDRLWERLGKSHI 464 SAT + D++ L+ + ++ + S + + V+ V K L + L S Sbjct 341 SATFPA-DIQHLARDFLSDYIFLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSAS-- 397 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 TD + +IF TK D L Sbjct 398 -TDGL---------------------------------------TLIFVETKRMADQLTD 417 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ L F+ G L+ T VAARG+DI V Sbjct 418 FLIMQ---------NFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNV 468 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +VIN LP + +YVHRIGR GRA GLA + +E + Sbjct 469 THVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNI 510 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/53 (40%), Positives = 32/53 (60%), Gaps = 0/53 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 PT +Q S+P++ G D++ A+TGSGKTG F PV+ ++T Q +G Sbjct 165 PTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQG 217 >sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=prp-5 PE=3 SV=1 Length=1194 Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/342 (29%), Positives = 168/342 (49%), Gaps = 64/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+REL Q ++++ F K + KLR + GG A +DQ++ L+ G +I+V TPG Sbjct 637 ALIMTPTRELCTQIYSDLQPFAKAL---KLRVVAAYGGNAIKDQIAELKRGAEIIVATPG 693 Query 349 RLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQI-PQVTSDGKRLQVI 404 RL DL++ G++ NL + +LVLDEAD + G+ + ++ N + P Q I Sbjct 694 RLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNVRPD-------RQTI 746 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN--PKTDRLWERLGKS 462 + SAT+ + L++K++ P + + G V + +V ++ K +RL E LG+ Sbjct 747 LFSATMPRI-IDALTKKVLRDPVEITVGGRSVVAPEITQIVEVMDEGKKFNRLLELLGEL 805 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + DDV +++IF + D+L Sbjct 806 YADDDDV--------------------------------------RSLIFVERQEKADDL 827 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + +++G + C+ +HG + +R + FKKG LI T +AARG+D+ Sbjct 828 LRELLRRG---------YGCMSIHGGKDQEDRNSTISDFKKGVCPILIATSIAARGLDVK 878 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + VIN P+ ++YVHR GR GRA G A++ + E+E Sbjct 879 QLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQE 920 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/68 (40%), Positives = 45/68 (66%), Gaps = 4/68 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +S+ G+ I +E + + PT IQ +++P+I+ G DV+ A+TGSGKT AF++P+++ Sbjct 563 WSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLRH 622 Query 64 VYETLKDQ 71 V KDQ Sbjct 623 V----KDQ 626 >sp|Q2HBE7|DED1_CHAGB ATP-dependent RNA helicase DED1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DED1 PE=3 SV=1 Length=688 Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/332 (32%), Positives = 159/332 (48%), Gaps = 55/332 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+REL Q ++ +K+ +R ++ GG QL +E G D++V T Sbjct 283 PTALILAPTRELVSQIY---EEARKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVAT 339 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++L +++LVLDEAD +L G+ I R+ Q + + G+R Q ++ Sbjct 340 PGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIV-QGEDMPTTGQR-QTLMF 397 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + +D + D V V V ++ + +++ Sbjct 398 SAT---------------FPRDIQMLAQDFLNDYVFLSVGRVGSTSENITQKVEY----V 438 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +DV + S + IL H +IF TK D+L + Sbjct 439 EDVDKR-------------SVLLDILH---------THAGGLTLIFVETKRMADSLSDFL 476 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q F +HGDR ER++ LE F+ G L+ T VAARG+DI V + Sbjct 477 INQ---------NFPATSIHGDRTQRERERALELFRNGKCPILVATAVAARGLDIPNVTH 527 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 VIN LP + +YVHRIGR GRA G+A + Sbjct 528 VINYDLPTDVDDYVHRIGRTGRAGNTGIATAF 559 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS + + +E + +PT +Q SIP+++ G D++ A+TGSGKTG F P++ Sbjct 200 FSNPPLDAHLLSNIELARYQIPTPVQKYSIPIVINGRDLMACAQTGSGKTGGFLFPIM 257 >sp|Q87KH5|RHLB_VIBPA ATP-dependent RNA helicase RhlB OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=rhlB PE=3 SV=1 Length=437 Score = 142 bits (359), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 113/339 (33%), Positives = 167/339 (49%), Gaps = 57/339 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+A+I+ P+RELA Q N+ + I + L+ L GG + QL+ L++GVDI+ Sbjct 82 PTQPRAIIMAPTRELAIQIFNDAEPL---IASTGLKAALAYGGESYDKQLAKLQDGVDIL 138 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +GT GR+ D NL+ ++ +VLDEAD + G+ I + ++P+ +RL + Sbjct 139 IGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMPE---PKERLNM 195 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SATL S+ V++L+ + MH P H VV P R+ E L + Sbjct 196 LF-SATL-SYRVQELAFEHMHNPE--------------HVVVEPAQKTGHRIQEEL--FY 237 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +D A T I+E D+AI+F TK C+++ Sbjct 238 PSNEDKMALLQT------------------------LIEEEWPDRAIVFANTKHKCESV- 272 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G GH+ L GD +R++ LE+F KGDV L+ TDVAARG+ I Sbjct 273 ------WGHLAADGHRVG--LLTGDVPQKKREKILEQFTKGDVDILVATDVAARGLHIPQ 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEE 363 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 37/53 (70%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++G+ P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLQPQVTEGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAF 63 >sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP2 PE=3 SV=2 Length=545 Score = 144 bits (364), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 106/344 (31%), Positives = 166/344 (48%), Gaps = 61/344 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 200 DGPIVLVLAPTRELAVQIQAEITKFGK---SSRIRNTCVYGGVPRGPQIRDLSRGVEVCI 256 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ I Q+ D Q Sbjct 257 ATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI---IGQIRPD---RQTC 310 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVN--PKTDRLWERLGK 461 + SAT +V++L+ +H V + +D S + +V V+ K DR+ L + Sbjct 311 MWSATWPK-EVRQLAHDFLHDYIQVYIGSQDLSANHRITQIVEIVSDFEKRDRMINHLER 369 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 I + K + +IF TK D+ Sbjct 370 ---------------------------------------IMDDKKSKILIFTGTKRVADD 390 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + F++Q G P + +HGD++ +ER L FK G ++ TDVA+RGID+ Sbjct 391 ITR-FLRQDGWP--------ALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDV 441 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +V+N P+ ++YVHRIGR GRA G AI+L T+ K Sbjct 442 RDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAK 485 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 32/59 (54%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 129 TFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 187 >sp|A4QSS5|DBP2_PYRO7 ATP-dependent RNA helicase DBP2 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP2 PE=3 SV=1 Length=548 Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/341 (30%), Positives = 171/341 (50%), Gaps = 53/341 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 197 DGPIVLILAPTRELAVQIQAEISKFGK---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 253 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ I Q+ D Q + Sbjct 254 ATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI---IGQIRPD---RQTL 307 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V+ ++ + +D + + + + N + ++ E + +S Sbjct 308 MWSATWPK-EVRNMAADFL----------QDFIQVNIGSLDLSANHRITQIVEVVSESEK 356 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R M K++ G K+ K ++ +IF TK D + + Sbjct 357 RD----------------RMIRHMEKVMDG-------KDSK-NKILIFVGTKRVADEITR 392 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD++ +ER L++FK G ++ TDVA+RGID+ + Sbjct 393 -FLRQDGWP--------ALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNI 443 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +V+N P+ ++Y+HRIGR GRA G AI+ TE K Sbjct 444 THVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSK 484 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 127 FDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 184 >sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0602400 PE=2 SV=2 Length=602 Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 100/332 (30%), Positives = 160/332 (48%), Gaps = 46/332 (14%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+AL++ P+RELA Q +N ++ KK+ LR ++ GG +QL LE G DI+V T Sbjct 169 PRALVLAPTRELAAQ-IN--EEAKKFSFQTGLRVVVAYGGTPMYNQLRDLERGADILVAT 225 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D+V K++L +++LV+DEAD +L G+ I ++ ++ + Q ++ Sbjct 226 PGRLVDMVERSKVSLEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVR--QTMLF 283 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + D + + + V V TD + + K + + Sbjct 284 SAT---------------FPPEIQRLASDFLSNYIFITVGRVGSSTDLIMQ---KVELLS 325 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D E + +L+ + A + + ++F TK + D+L + Sbjct 326 DG--------------EKRGYLLDLLQRQSVGVANSKLQQPLTLVFVETKREADSLRYWL 371 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +G F +HGDR ER+ L FK G ++ TDVA+RG+D+ V + Sbjct 372 YSKG---------FPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVAH 422 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 VIN LP ++YVHRIGR GRA + G A + Sbjct 423 VINYDLPKSIEDYVHRIGRTGRAGKAGSATAF 454 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/58 (38%), Positives = 35/58 (60%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F G++ + + V + PT +Q S+P+ L G D++ A+TGSGKT AF +PV+ Sbjct 86 FEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSGKTAAFCLPVV 143 >sp|Q75B50|DED1_EREGS ATP-dependent RNA helicase DED1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DED1 PE=3 SV=2 Length=623 Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 154/332 (46%), Gaps = 55/332 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA Q + + KK+ ++ ++ GG R Q+ LE G D++V T Sbjct 229 PTAVVLAPTRELATQIFD---EAKKFTYRSWVKPCVVYGGADIRQQIRELERGCDLIVAT 285 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ GK++L V++LVLDEAD +L G+ I + T + + Q ++ Sbjct 286 PGRLNDLLERGKISLCSVKYLVLDEADRMLDMGFEPQIRHIVEGCDMPTVENR--QTLMF 343 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FPT + D + D + V V ++ + +++ Sbjct 344 SAT---------------FPTDIQHLAADFLKDYIFLSVGRVGSTSENITQKV------- 381 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +H +D I K + + ++F TK D L + Sbjct 382 --LHVED-----------------IDKRSVLLDLLAASDGGLTLVFVETKRMADALTDFL 422 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q S +HGDR ER++ L F+ G L+ T VAARG+DI V + Sbjct 423 IMQ---------NLSATAIHGDRTQAERERALAFFRTGRANVLVATAVAARGLDIPNVTH 473 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 VIN LP + +YVHRIGR GRA GLA + Sbjct 474 VINYDLPSDIDDYVHRIGRTGRAGNTGLATAF 505 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 18/37 (49%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT +Q S+P++ G D++ A+TGSGKTG F PV+ Sbjct 169 PTPVQKYSVPIVAKGRDLMACAQTGSGKTGGFLFPVL 205 >sp|Q8Y755|CSHB_LISMO DEAD-box ATP-dependent RNA helicase CshB OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=cshB PE=2 SV=1 Length=435 Score = 142 bits (358), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 160/336 (48%), Gaps = 61/336 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 +A +A+I PSRELA Q N I++ KY + ++ L+IGG + + L+ I+V Sbjct 72 DAVQAVITAPSRELATQIYNEIRKVTKYSEK-EIAVQLVIGGTDKQRAIDKLKKQPQIIV 130 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR++DL+ L + + LV+DEAD L G+ + ++ + ++P LQ++ Sbjct 131 GTPGRINDLIREQALFVHTAKTLVIDEADMTLDMGFLNDVDHIAGKMPA------NLQML 184 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP--KTDRLWERLGKS 462 V SAT+ +K K M P + ++ + + TV H ++ K D L L S Sbjct 185 VFSATIPQ-KLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRSRNKLDLLKNVLVGS 243 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 P + AI+F TK D + Sbjct 244 Q------------------PYL------------------------AIVFTNTKTTADEV 261 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 I++G +HGD P ERK+ +++ + D ++++ TD+AARGIDI Sbjct 262 ANGLIERG---------LKVAKIHGDVNPRERKRTMKQIENLDYQYVVATDLAARGIDIQ 312 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 G+ +V+N LPD+ Y+HR GR GRA G+A++L Sbjct 313 GISHVVNYELPDDLDFYIHRTGRTGRAGHSGIALTL 348 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/63 (35%), Positives = 39/63 (62%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + G P I A++++ + PT++Q + IP IL G ++ ++TG+GKT F +P+I Sbjct 5 SRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFILPII 64 Query 62 QIV 64 V Sbjct 65 NNV 67 >sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp2 PE=3 SV=1 Length=545 Score = 144 bits (363), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 104/342 (30%), Positives = 167/342 (49%), Gaps = 57/342 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 191 DGPIVLILAPTRELAVQIQTEISKFGK---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 247 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ I Q+ D Q Sbjct 248 ATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI---ISQIRPD---RQTC 301 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SAT +V++L+ ++ V++ D S + +V V+ Sbjct 302 MWSATWPK-EVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVS-------------- 346 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 D +D K++K + I E++ ++ +IF TK D + Sbjct 347 ----DFEKRD----------------KMIK---HLEKIMENRGNKCLIFTGTKRIADEIT 383 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + F++Q G P + +HGD++ ER L FK G ++ TDVA+RGID+ Sbjct 384 R-FLRQDGWP--------ALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRD 434 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +V+N P+ ++Y+HRIGR GRA G AI+ TE K Sbjct 435 ITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSK 476 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 121 FDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 178 >sp|A6SFW7|DBP2_BOTFB ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp2 PE=3 SV=2 Length=514 Score = 144 bits (362), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 109/363 (30%), Positives = 174/363 (48%), Gaps = 57/363 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 174 DGPIVLVLAPTRELAVQIQQEITKFGK---SSRIRNTCVYGGVPKGGQIRDLAKGVEVCI 230 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ QI Q Sbjct 231 ATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQI------RPDRQTC 284 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V+ L+ ++ V++ + L +H Sbjct 285 MWSATWPK-EVRALASDYLNEFIQVNIGSLE-----------------------LSANHR 320 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T V E+ SE K K + I E K ++ +IF TK D++ + Sbjct 321 ITQIV-------------EVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITR 367 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD++ +ER L FK G ++ TDVA+RGID+ + Sbjct 368 -FLRQDGWP--------ALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNI 418 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS--SRGKGCYNTR 642 +V N P+ ++Y+HRIGR GRA + G AI+L T+ +K + + + K + R Sbjct 419 THVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQKQARDLVNVLTEAKQVIDPR 478 Query 643 LKE 645 L E Sbjct 479 LAE 481 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 32/59 (54%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 103 TFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 161 >sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP2 PE=3 SV=1 Length=552 Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 105/341 (31%), Positives = 162/341 (48%), Gaps = 55/341 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F K + K+R + GGV Q+ L GV+IV+ Sbjct 188 DGPIVLVLAPTRELAVQIQQECSKFGK---SSKIRNTCVYGGVPRGQQIRDLARGVEIVI 244 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 245 ATPGRLLDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 298 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +P V D + D + + + L SH Sbjct 299 MWSAT---------------WPKEVQRLAHDYLKDQIQVNIGSLE---------LSASHN 334 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T V E+ +E K + + + E+K + +IF TK D++ + Sbjct 335 ITQVV-------------EVCTEYEKRDRLVKHLETVMENKESKCLIFTGTKRVADDITK 381 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD++ ER L F++G ++ TDVA+RGID+ G+ Sbjct 382 -FLRQDGWP--------ALAIHGDKQQQERDWVLNEFRQGKSPIMVATDVASRGIDVKGI 432 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +VIN P ++YVHRIGR GRA G A + + K Sbjct 433 NFVINYDYPSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNRK 473 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 34/58 (59%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G P + + V++ + PT IQ + P+ L G DV+ A TGSGKT ++ +P I Sbjct 118 FDEAGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSYCLPAI 175 >sp|Q2UMH8|DBP3_ASPOR ATP-dependent RNA helicase dbp3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp3 PE=3 SV=1 Length=498 Score = 142 bits (359), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 113/352 (32%), Positives = 163/352 (46%), Gaps = 63/352 (18%) Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 TK P P A+I+ P+RELA Q + + +F + +R + GGV +Q L+ Sbjct 148 TKQKPYRPLAVIISPTRELAMQIYDQLLKFSGSVG---VRVACVFGGVRKEEQREALKTA 204 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VV TPGRL DL + G ++L +V++LVLDEAD +L +G+ I + +P Sbjct 205 -GVVVATPGRLKDLQNDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIIRPMPV-----S 258 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP----DTVHHVVVPVNP--KTD 453 + Q I+ +AT V+ L+ M P V + G+ S + VV V P K Sbjct 259 KRQTIMFTATWPP-SVRDLASTFMSSPVTVTIGGDPSADPRANTRIKQVVEVVKPHEKES 317 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 RL + L +S G PE + + FC Sbjct 318 RLVQLLNRSQ-------------RGVPEPE------------------------KVLAFC 340 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 K + +E+ +G F +HGD ER ++L+ FK G L+ TD Sbjct 341 LYKKEAMRIERLLRTKG---------FKVAGIHGDLSQQERFRSLDAFKTGAATVLVATD 391 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 VAARG+DI V VINVT P ++YVHRIGR GRA G A++L TE +K Sbjct 392 VAARGLDIPSVKQVINVTFPLTVEDYVHRIGRTGRAGAEGHAVTLF-TETDK 442 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (5%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTG 84 PT IQ+ + PL+ G DV+ AETGSGKT AF +P ++ + ++ +Q+ + I Sbjct 103 PTSIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKIQDSAMTKQKPYRPLAVI--- 159 Query 85 ASVLNKWQMNPYDRGSAFAIGSDGL 109 S + M YD+ F+ GS G+ Sbjct 160 ISPTRELAMQIYDQLLKFS-GSVGV 183 >sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DED1 PE=3 SV=1 Length=617 Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 99/340 (29%), Positives = 161/340 (47%), Gaps = 55/340 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA Q + + KK+ ++ ++ GG +Q+ +++G D++V T Sbjct 229 PTAVVMAPTRELATQIFD---EAKKFCYRSWVKPCVVYGGAPIGNQMREMDHGCDLLVAT 285 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ GK++LS V++LVLDEAD +L G+ I + + G+R Q ++ Sbjct 286 PGRLNDLLERGKVSLSNVKYLVLDEADRMLDMGFEPQIRHIVEDC-DMPPTGER-QTLMF 343 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L+ +H ++ + S + + ++ V E K+ Sbjct 344 SATF-PHDIQHLARDFLHDYIFLSVGRVGSTSENITQRILYV--------ENRDKNSALL 394 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D + A ++ + +IF TK D L + Sbjct 395 DLLAASND--------------------------------NLTLIFVETKRMADQLTDFL 422 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q FS +HGDR ER++ L F+ G L+ T VAARG+DI V + Sbjct 423 IMQ---------NFSATAIHGDRSQAERERALAAFRSGRANILVATAVAARGLDIPNVTH 473 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP + +YVHRIGR GRA G+A + + + Sbjct 474 VINYDLPSDVDDYVHRIGRTGRAGNTGVATAFFNRDNNNI 513 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 31/53 (58%), Gaps = 0/53 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 PT +Q S+P++ G D++ A+TGSGKTG F PV+ + T ++ G Sbjct 168 PTPVQKYSVPIVSKGRDLMACAQTGSGKTGGFLFPVLSESFLTGPAEKAANDG 220 >sp|Q5B0J9|DBP2_EMENI ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp2 PE=3 SV=1 Length=563 Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 104/344 (30%), Positives = 166/344 (48%), Gaps = 61/344 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 212 DGPIVLILAPTRELAVQIQAEISKFGK---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 268 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ I Q+ D Q Sbjct 269 ATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI---ISQIRPD---RQTC 322 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNP--KTDRLWERLGK 461 + SAT +V++L+ ++ V++ D S + +V ++ K DR+ + L K Sbjct 323 MWSATWPK-EVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEK 381 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 I E++ ++ ++F TK D Sbjct 382 ---------------------------------------IMENRGNKCLVFTGTKRIADE 402 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + F++Q G P + +HGD++ ER L FK G ++ TDVA+RGID+ Sbjct 403 ITR-FLRQDGWP--------ALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDV 453 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +VIN P+ ++YVHRIGR GRA G AI+ T+ K Sbjct 454 RDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAK 497 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 33/59 (56%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT ++ +P I Sbjct 141 TFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 199 >sp|Q6BU54|DED1_DEBHA ATP-dependent RNA helicase DED1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DED1 PE=3 SV=1 Length=630 Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 100/340 (29%), Positives = 154/340 (45%), Gaps = 71/340 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q + K+F +R ++ GG Q+ LE G D++V T Sbjct 240 PTALVMAPTRELVSQIFDEAKKFAY---RSWVRPSVVYGGADIGGQIRNLERGCDLLVAT 296 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL DL+ G+++L+ +++LVLDEAD +L G+ I + + +P V + Q + Sbjct 297 PGRLKDLLERGRVSLASIKYLVLDEADRMLDMGFEPQIRHIVQECDMPGV----EDRQTL 352 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL----- 459 + SAT FP + D + + + V V ++ + +++ Sbjct 353 MFSAT---------------FPKEIQFLARDFLKEYIFLSVGRVGSTSENITQKILYVED 397 Query 460 -GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K + D + A DN IIF TK Sbjct 398 EEKKSVLLDLLSANDN--------------------------------GLTIIFTETKRM 425 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 DNL + QG F +HGDR +ER++ L FK G L+ T VAARG Sbjct 426 ADNLADFLYDQG---------FPATAIHGDRSQYEREKALAAFKTGTAPILVATAVAARG 476 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +DI V +++N LP + +YVHRIGR GRA +G+A + Sbjct 477 LDIPNVSHIVNYDLPSDIDDYVHRIGRTGRAGNIGIATAF 516 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 0/65 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + P + + V+ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 155 ITAFTAPPLDPLLVENVKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 214 Query 61 IQIVY 65 + Y Sbjct 215 LSESY 219 >sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp2 PE=3 SV=2 Length=547 Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 103/342 (30%), Positives = 167/342 (49%), Gaps = 57/342 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 193 DGPIVLILAPTRELAVQIQAEISKFGK---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 249 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ + Q+ D Q Sbjct 250 ATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI---VSQIRPD---RQTC 303 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SAT +V++L+ ++ V++ D S + +V V+ Sbjct 304 MWSATWPK-EVRQLATDFLNDYIQVNIGSMDLSANHRITQIVEVVS-------------- 348 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 D +D K++K + I E++ ++ +IF TK D + Sbjct 349 ----DFEKRD----------------KMIK---HLEKIMENRSNKCLIFTGTKRIADEIT 385 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + F++Q G P + +HGD++ ER L FK G ++ TDVA+RGID+ Sbjct 386 R-FLRQDGWP--------ALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRD 436 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +V+N P+ ++Y+HRIGR GRA G AI+ TE K Sbjct 437 ITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSK 478 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 123 FDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 180 >sp|Q5AWA6|DBP3_EMENI ATP-dependent RNA helicase dbp3 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp3 PE=3 SV=2 Length=488 Score = 142 bits (358), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 110/346 (32%), Positives = 168/346 (49%), Gaps = 67/346 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA Q + + +F + +D ++ I GGV +Q L++ +VV T Sbjct 147 PLAVVISPTRELAMQIYDQLVKFAEKVD---IQVACIFGGVKKDEQREALKSAA-VVVAT 202 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL + G L+L +V++LVLDEAD +L +G+ I + + +P KR Q ++ Sbjct 203 PGRLKDLQNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPMPV----SKR-QTVMF 257 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 +AT V+ L+ M P V + G +P D Sbjct 258 TATWPPI-VRNLASTFMTSPVTVTIGG---------------DPSAD------------- 288 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKG----EYAVRAIKEHKM---DQAIIFCRTKIDC 519 P ANS + ++++K + V+ + H+ D+ + FC K + Sbjct 289 ----------PRANS--RIKQVVEVVKPHEKEQRLVQILNRHQRGTPDKVLAFCLYKKEA 336 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 +E+ +G F +HGD ER ++LE FK G L+ TDVAARG+ Sbjct 337 MRVERLLRTKG---------FKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGL 387 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 DI V V+NVT P ++YVHRIGR GRA G AI+L TE +K Sbjct 388 DIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLF-TETDK 432 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 30/79 (38%), Positives = 44/79 (56%), Gaps = 4/79 (5%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTG 84 PT IQ+ + PL+ G DV+ AETGSGKT AF +P ++ V + LK +Q+ + + Sbjct 96 PTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLD-LKTKQKSCRPLAVV--- 151 Query 85 ASVLNKWQMNPYDRGSAFA 103 S + M YD+ FA Sbjct 152 ISPTRELAMQIYDQLVKFA 170 >sp|Q6C9P3|DBP3_YARLI ATP-dependent RNA helicase DBP3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP3 PE=3 SV=1 Length=532 Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 113/338 (33%), Positives = 162/338 (48%), Gaps = 56/338 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L+V P+RELA Q +NIK+ D L + + GGV Q S L+ V+ TP Sbjct 196 RVLVVSPTRELAMQIYDNIKEL---CDVVGLHAVCVYGGVPKEQQRSDLKRA-SFVIATP 251 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL+ G +LS+V +LVLDEAD +L +G+ + I ++ I G+ Q ++ S Sbjct 252 GRLCDLIDEGSCDLSKVSYLVLDEADRMLEKGFEEDIKKI---IGSTRPTGR--QTVMFS 306 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT +V+KL+E M PT V + D + R+ + + R Sbjct 307 ATWPP-EVRKLAEGFMKTPTKVMIGERDELA------------ANKRITQSVEVLDPRAK 353 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 + D R AN + KIL IF K + +E Sbjct 354 EGRLLDLLRQYAN------DDFKIL------------------IFALYKKEATRVENTLT 389 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 ++G + +HGD +R + L+ FKKG+ L+ TDVAARG+DI V V Sbjct 390 RRG---------YGVAAIHGDLSQQQRTKALDEFKKGEKNILLATDVAARGLDIPNVKLV 440 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 IN+T P ++YVHRIGR GRA + G AI+L TE EK Sbjct 441 INLTFPLTVEDYVHRIGRTGRAGKTGQAITLF-TEHEK 477 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/64 (41%), Positives = 39/64 (61%), Gaps = 2/64 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P I + + + + PT IQA S P +L G D++ AETGSGKT F++P ++ Sbjct 128 FSHVTLDPRITKVLTK--FPRPTPIQAVSWPYLLAGKDMVGVAETGSGKTFTFAVPALEH 185 Query 64 VYET 67 V T Sbjct 186 VLST 189 >sp|Q4I7K4|DED1_GIBZE ATP-dependent RNA helicase DED1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DED1 PE=3 SV=1 Length=675 Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 103/334 (31%), Positives = 157/334 (47%), Gaps = 59/334 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + + +K+ +R ++ GG QL +E G D++V T Sbjct 272 PTSLILAPTRELVSQIFD---ESRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 328 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++LVLDEAD +L G+ I R+ +PQV + Q + Sbjct 329 PGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPQV----QDRQTL 384 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + D + D + V V ++ + +++ Sbjct 385 MFSAT---------------FPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEY--- 426 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +DV + S + IL H +IF TK D+L Sbjct 427 -VEDVDKR-------------SVLLDILH---------SHANGLTLIFVETKRMADSLSD 463 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ LE F+ G L+ T VAARG+DI V Sbjct 464 FLINQ---------NFPATSIHGDRTQRERERALEFFRNGRCPILVATAVAARGLDIPHV 514 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + +YVHRIGR GRA G+A + Sbjct 515 THVINYDLPTDVDDYVHRIGRTGRAGNTGIATAF 548 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 + + +E + +PT +Q SIP++ GG D++ A+TGSGKTG F P++ + Sbjct 197 LCRNIELAHYKVPTPVQKYSIPIVSGGRDLMACAQTGSGKTGGFLFPILSQAF 249 >sp|Q8H136|RH14_ARATH DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2 Length=619 Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/342 (29%), Positives = 156/342 (46%), Gaps = 63/342 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+RELA Q +F + + ++ + GG QL LE G DIVV T Sbjct 231 PTILVLSPTRELATQIQEEAVKFGR---SSRISCTCLYGGAPKGPQLRDLERGADIVVAT 287 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+D++ +++L Q+ +LVLDEAD +L G+ I ++ +IP + Q ++ Sbjct 288 PGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIP------TKRQTLMY 341 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSV---PDTVHHVVVPVNPKTDRLWERLGKSH 463 +AT V+K++ ++ P V++ D + H+ V + R E++ +S Sbjct 342 TATWPK-GVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQ 400 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 PG+ + IIFC TK CD L Sbjct 401 ------------EPGS----------------------------KVIIFCSTKRMCDQLT 420 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + +Q F +HGD+ ER L +F+ G L+ TDVAARG+D+ Sbjct 421 RNLTRQ----------FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGLDVKD 470 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + V+N P+ ++YVHRIGR GRA G A + + K Sbjct 471 IRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSK 512 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +F G PE+ + V + PT IQA+S P+ + G D++ A+TGSGKT + IP Sbjct 157 LMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIP 215 >sp|Q0UWA6|DED1_PHANO ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DED1 PE=3 SV=1 Length=696 Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 97/332 (29%), Positives = 155/332 (47%), Gaps = 55/332 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + ++F +R ++ GG QL +E G D++V T Sbjct 287 PTSLILAPTRELVSQIFDEARKFAY---RSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 343 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++L+ +++LVLDEAD +L G+ I R+ + G+ Q ++ Sbjct 344 PGRLVDLIERGRISLASIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPPTAGR--QTLMF 401 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + D + + + V V ++ + +++ ++ Sbjct 402 SAT---------------FPRDIQMLARDFLKEYIFLSVGRVGSTSENITQKI--EYVED 444 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D K + + H ++IF TK D+L + Sbjct 445 AD------------------------KRSVLLDILHTHGAGLSLIFVETKRMADSLSDFL 480 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I QG F +HGDR ER++ LE F+ G L+ T VAARG+DI V + Sbjct 481 INQG---------FPATSIHGDRTQREREKALEMFRSGRCPILVATAVAARGLDIPNVTH 531 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V+N LP + +YVHRIGR GRA G+A + Sbjct 532 VVNYDLPTDIDDYVHRIGRTGRAGNTGIATAF 563 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 34/51 (67%), Gaps = 0/51 (0%) Query 17 VEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 +E + +PT +Q SIP+++GG D++ A+TGSGKTG F P++ ++ Sbjct 216 IELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILAQAFQN 266 >sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=PRP5 PE=3 SV=1 Length=1064 Score = 145 bits (367), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 98/341 (29%), Positives = 166/341 (49%), Gaps = 62/341 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+REL Q +++ F K + KLR + GG A +DQ++ L+ G +I+V TPG Sbjct 505 ALIMTPTRELCTQIYSDLLPFAKAL---KLRAIAAYGGNAIKDQIAELKRGAEIIVATPG 561 Query 349 RLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 R+ DL++ +G++ NL + +LVLDEAD + G+ + ++ N + Q I+ Sbjct 562 RMIDLLAANSGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNV------RPDRQTIL 615 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN--PKTDRLWERLGKSH 463 SAT+ + L++K++ P + + G V + +V ++ K RL E LG+ + Sbjct 616 FSATMPRI-IDALTKKVLREPVEIQVGGRSVVAPEITQIVEILDEGKKFVRLLELLGELY 674 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 DDV +A+IF + D+L Sbjct 675 ADDDDV--------------------------------------RALIFVERQEKADDLL 696 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + +++G + C+ +HG + +R + FKKG +I T VAARG+D+ Sbjct 697 REVLRRG---------YGCMSIHGGKDQEDRNSTISDFKKGVCPIMIATSVAARGLDVKQ 747 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + V+N P+ ++YVHR GR GRA G A++ + E+E Sbjct 748 LKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQE 788 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 40/59 (68%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +S+ G+ I VE + + PT IQ +++P+I+ G DV+ A+TGSGKT AF +P+++ Sbjct 431 WSQCGLTRPILDVVEGLGYEKPTSIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLR 489 >sp|Q10055|FAL1_SCHPO ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tif412 PE=1 SV=1 Length=394 Score = 140 bits (352), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 102/339 (30%), Positives = 158/339 (47%), Gaps = 58/339 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q N + D+ ++ IGG + + + L+ G +V GTP Sbjct 91 QALILSPTRELAVQIQNVVLALG---DHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTP 147 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L V+ L+LDEAD LL+QG+ + I ++ +P T QV+V S Sbjct 148 GRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGT------QVVVVS 201 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL DV +++ K P + +K ++ + + + V Sbjct 202 ATLPQ-DVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAV------------------- 241 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC ++ D L + Sbjct 242 -------------EKEEWK--FDTLCDLYDTLTIT-----QAVIFCNSRRKVDWLTEKM- 280 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HG+ ER ++ F++G+ R LICTD+ ARGID+ V V Sbjct 281 --------REANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLV 332 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 IN LP ++NY+HRIGR GR R G+AI+ V E ++ Sbjct 333 INYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRI 371 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 44/72 (61%), Gaps = 0/72 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F EM + ++ + + + P+ +Q+ +I I G DV+ A++G+GKT FSI + Sbjct 20 VSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGI 79 Query 61 IQIVYETLKDQQ 72 +Q + +++D Q Sbjct 80 LQSIDLSVRDTQ 91 >sp|B2VG58|RHLB_ERWT9 ATP-dependent RNA helicase RhlB OS=Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99) OX=465817 GN=rhlB PE=3 SV=1 Length=430 Score = 140 bits (354), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 109/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLENGVD+++ Sbjct 83 NQPRALILAPTRELAVQIHADAEPLAQITG---LKLGLAYGGDGYDKQLKVLENGVDVLI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHVNLGAIQVVVLDEADRMFDLGFIKDIRWLFRRMPAAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL SF V++L+ + M+ +V+++ + + + P N + RL + L Sbjct 197 F-SATL-SFRVRELAFENMNNAEYVEVEPDQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+ IIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRTIIFANTKHRCEDVW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F KGDV L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDDFTKGDVDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD++++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDREDYVHRIGRTGRAGANGHSISLACEE 363 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E + T IQA ++P L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVIEALETKGFHNCTPIQALALPFTLSGRDVAGQAQTGTGKTMAF 63 >sp|Q10202|DBP3_SCHPO ATP-dependent RNA helicase dbp3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp3 PE=3 SV=1 Length=578 Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/337 (30%), Positives = 159/337 (47%), Gaps = 55/337 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P+ L+V P+RELA QT N+ I L+ +++ GG +Q +N +++ Sbjct 235 SVPRVLVVSPTRELAIQTYENLNSL---IQGTNLKAVVVYGGAPKSEQARAAKNA-SVII 290 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGRL DL++ G ++ SQV +LVLDEAD +L G+ I + + P T +G R Q + Sbjct 291 GTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSR-QTV 349 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVV-VPVNPKT-DRLWERLGK 461 SAT V+ L+ + P + + ++ + + +V + +P++ +R+ + L + Sbjct 350 FFSATWPE-SVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNLLR 408 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 H+ + K D+ +IF K + Sbjct 409 KHLSSGG------------------------------------KDDKILIFVLYKKEAAR 432 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 +E +++ V +HGD R Q L FK G L+ TDVAARG+DI Sbjct 433 VEGTL----------ARKYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDI 482 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V VINVT P ++YVHRIGR GRA G AI+ Sbjct 483 PKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITF 519 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E+ V ++ + ++ ++ PT IQA + P +L G DV+ AETGSGKT AF IP +Q Sbjct 169 FDELDVSAKLREGLK--NYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQ 225 >sp|Q6CZD9|RHLB_PECAS ATP-dependent RNA helicase RhlB OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=rhlB PE=3 SV=3 Length=430 Score = 140 bits (353), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 114/353 (32%), Positives = 169/353 (48%), Gaps = 64/353 (18%) Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 H NA+ QT N P+ALI+ P+RELA Q ++ + L+ L GG Sbjct 74 HPANAE-RQT----NQPRALIMAPTRELAVQIHSDAEALSHLTG---LKLGLAYGGDGYD 125 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 QL VLENGVDI+VGT GRL D +NL ++ +VLDEAD + G+ I + + Sbjct 126 KQLKVLENGVDILVGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVN 449 +P + +RL ++ SATL S+ V++L+ + M+ +V+++ E + + P N Sbjct 186 MPATS---QRLNMLF-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRITEELFYPSN 240 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + RL + L ++E D+ Sbjct 241 EEKMRLLQTL-----------------------------------------LEEEWPDRC 259 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIF TK C+++ G GH+ L GD +R + LE F +G + L Sbjct 260 IIFANTKHRCEDV-------WGHLAADGHRVGL--LTGDVAQKKRLRILEEFTQGSIDIL 310 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G +ISL E Sbjct 311 VATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGQSGFSISLACEE 363 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVIEALESKGFHYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|Q9C8J1|RH34_ARATH DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana OX=3702 GN=RH34 PE=2 SV=2 Length=392 Score = 139 bits (351), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 102/341 (30%), Positives = 159/341 (47%), Gaps = 64/341 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L++ PSRELA QT I+ + + ++ IGG + + + LE GV V GTP Sbjct 92 QVLVLSPSRELASQTEKTIQAIGAHTN---IQAHACIGGKSIGEDIKKLERGVHAVSGTP 148 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ G L V+ LVLDE+D +LS+G D I ++ +P +QV + S Sbjct 149 GRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPH------DIQVCLIS 202 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP---KTDRLWERLGKSHI 464 ATL ++ +++EK M P + +K ++ + + V V+ K D L + G+ I Sbjct 203 ATLPQ-EILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTI 261 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +QAIIFC T+ D L + Sbjct 262 ------------------------------------------NQAIIFCNTRQKVDWLTE 279 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + F +HGD++ ER + +F+ R LI +DV ARGID+ V Sbjct 280 KM---------RSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTV 330 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +VIN +P+ + Y+HRIGR GR R G+AI+ V + K Sbjct 331 SHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMK 371 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 40/64 (63%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +MG+ ++ + V + + P++IQ ++ IL G DV+ A++G+GKT +I V Sbjct 21 IKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISV 80 Query 61 IQIV 64 QIV Sbjct 81 CQIV 84 >sp|A6QSQ0|FAL1_AJECN ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=FAL1 PE=3 SV=1 Length=450 Score = 140 bits (354), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/340 (30%), Positives = 161/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + + Y++ ++ IGG + + L++G +V GTP Sbjct 95 QALVLSPTRELATQIQSVVMALGDYMN---VQCHACIGGTNVGEDIRKLDHGQHVVSGTP 151 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 152 GRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 205 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P + +K ++ + + + V Sbjct 206 ATL-PYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------------- 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 248 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 280 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 281 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V +E ++ Sbjct 336 VINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRI 375 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IVYETLKDQQ 72 ++ L++ Q Sbjct 86 VIDTVLRETQ 95 >sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DED1 PE=3 SV=3 Length=647 Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 102/342 (30%), Positives = 160/342 (47%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+REL Q + K+F ++ ++ GG Q+ L+ G D++V T Sbjct 252 PTILVMAPTRELVSQIYDEAKKFAY---RSWVKPAVVYGGADIGQQIRNLDKGCDLLVAT 308 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL DL+ G+++L+ +++LVLDEAD +L G+ I + + +P V + Q + Sbjct 309 PGRLKDLLERGRVSLANIKYLVLDEADRMLDMGFEPQIRHIVQECDMPDV----QDRQTL 364 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FPT + + D + D + V V ++ + +++ Sbjct 365 MFSAT---------------FPTDIQMLARDFLKDYIFLSVGRVGSTSENITQKI----- 404 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 ++ +D E S + +L A IIF TK DNL Sbjct 405 ----LYVEDE--------EKKSVLLDLLSAGDA---------GLTIIFTETKRMADNLAD 443 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + QG F +HGDR +ER++ L FK G L+ T VAARG+DI V Sbjct 444 FLYDQG---------FPATAIHGDRSQYEREKALAAFKSGAAPILVATAVAARGLDIPNV 494 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +VIN LP + +YVHRIGR GRA +G+A + + V Sbjct 495 AHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNV 536 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 20/41 (49%), Positives = 28/41 (68%), Gaps = 0/41 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 PT +Q S+P++ GG D++ A+TGSGKTG F PV+ Y Sbjct 191 PTPVQKYSVPIVAGGRDLMACAQTGSGKTGGFLFPVLSESY 231 >sp|A2QC74|DBP2_ASPNC ATP-dependent RNA helicase dbp2 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp2 PE=3 SV=1 Length=565 Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 104/344 (30%), Positives = 166/344 (48%), Gaps = 61/344 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 209 DGPIVLILAPTRELAVQIQAEISKFGK---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 265 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ I Q+ D Q Sbjct 266 ATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI---ISQIRPD---RQTC 319 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVN--PKTDRLWERLGK 461 + SAT +V++L+ ++ V++ D S + +V V+ K D++ + L K Sbjct 320 MWSATWPK-EVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVSDFEKRDKMIKHLEK 378 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 I E++ ++ +IF TK D Sbjct 379 ---------------------------------------IMENRANKCLIFTGTKRIADE 399 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + F++Q G P + +HGD++ ER L FK G ++ TDVA+RGID+ Sbjct 400 ITR-FLRQDGWP--------ALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDV 450 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +V+N P+ ++YVHRIGR GRA G AI+ T+ K Sbjct 451 RDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSK 494 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 32/59 (54%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 138 TFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 196 >sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana OX=3702 GN=RH42 PE=1 SV=2 Length=1166 Score = 145 bits (366), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 105/348 (30%), Positives = 171/348 (49%), Gaps = 69/348 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+REL +Q ++I++F K + +R + + GG Q+S L+ G +IVV Sbjct 601 DGPIGLVMAPTRELVQQIHSDIRKFSKPLG---IRCVPVYGGSGVAQQISELKRGTEIVV 657 Query 345 GTPGRLDDLV--STGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQI-PQVTSDGKR 400 TPGR+ D++ S+GK+ NL +V FLV+DEAD + G+ I R+ I P+ Sbjct 658 CTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPE------- 710 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR---LWE 457 Q ++ SAT V+ L+ K+++ P + + G V + +V V P++DR L E Sbjct 711 RQTVLFSATFPR-QVETLARKVLNKPVEIQVGGRSVVNKDITQLV-EVRPESDRFLRLLE 768 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 LG+ WSE KIL +F +++ Sbjct 769 LLGE-----------------------WSEKGKIL------------------VFVQSQE 787 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 CD L + I+ + C+ LHG + +R+ + FK LI T VAAR Sbjct 788 KCDALYRDMIKSS---------YPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAAR 838 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 G+D+ + V+N P+ ++YVHR+GR GRA R G A++ ++ + K Sbjct 839 GLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAK 886 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/66 (32%), Positives = 42/66 (64%), Gaps = 4/66 (6%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 + G+ +I ++++++ P IQ +++P+I+ G D + A+TGSGKT F +P+++ Sbjct 533 QTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLR--- 589 Query 66 ETLKDQ 71 +KDQ Sbjct 590 -HIKDQ 594 >sp|Q9P6U9|DED1_NEUCR ATP-dependent RNA helicase ded1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-9 PE=3 SV=1 Length=688 Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 154/334 (46%), Gaps = 59/334 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+REL Q + ++F +R ++ GG QL +E G D++V T Sbjct 280 PTALILAPTRELVSQIYDEARKFAY---RSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 336 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++LVLDEAD +L G+ I R+ +P+V Q + Sbjct 337 PGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPKVNDR----QTL 392 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + D + D + V V ++ + +++ Sbjct 393 MFSAT---------------FPRDIQILARDFLKDYIFLSVGRVGSTSENITQKV----- 432 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + +D I K + + H +IF TK D+L Sbjct 433 ----EYVED-----------------IDKRSVLLDILHTHAGGLTLIFVETKRMADSLSD 471 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ LE F+ G L+ T VAARG+DI V Sbjct 472 FLINQ---------NFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNV 522 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + +YVHRIGR GRA G+A + Sbjct 523 THVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF 556 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 0/44 (0%) Query 24 LPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 +PT +Q SIP+++GG D++ A+TGSGKTG F P++ + T Sbjct 216 VPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQSFHT 259 >sp|Q0UY62|DBP3_PHANO ATP-dependent RNA helicase DBP3 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP3 PE=3 SV=1 Length=592 Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 110/338 (33%), Positives = 165/338 (49%), Gaps = 52/338 (15%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 KA+IV P+RELA Q + Q L + + GGV Q++ IVV TP Sbjct 252 KAVIVSPTRELAVQIYD---QLVALAHPAGLSVVCVYGGVPKDPQVAACRKA-HIVVATP 307 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL+DL+ G +LS ++VLDEAD +L +G+ + I ++ +Q P K+ Q ++ + Sbjct 308 GRLNDLIGDGSADLSNADYVVLDEADRMLDKGFEEPIRQIISQTP------KKRQTLMFT 361 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+ L+ M P + + S + N + +L E L Sbjct 362 ATWPP-SVRDLASTFMVSPVRITIGDNQSGE-------LRANVRIKQLVEVL-------- 405 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 D HAK+ +++LK + ++K D+ ++FC K + +E + Sbjct 406 DPHAKEQ------------RLLQLLKQYQS----GKNKDDRILVFCLYKKEAMRIENFIR 449 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G F +HGD +R +L FK+G V L+ TDVAARG+DI V V Sbjct 450 MKG---------FRVGGIHGDLSQEKRSASLAAFKEGQVPLLVATDVAARGLDIPAVKLV 500 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 INVT P ++YVHRIGR GRA + GLAI+ TE +K Sbjct 501 INVTFPLTAEDYVHRIGRTGRAGKEGLAITFF-TEHDK 537 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/56 (43%), Positives = 36/56 (64%), Gaps = 0/56 (0%) Query 22 WLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 + PT IQA + P +L G D++ AETGSGKT AF +P ++ + KD+++G K Sbjct 198 FTAPTPIQAATWPFLLSGRDMVGVAETGSGKTLAFGVPCVRAILSLPKDKRKGIKA 253 >sp|Q4WEB4|FAL1_ASPFU ATP-dependent RNA helicase fal1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=fal1 PE=3 SV=2 Length=398 Score = 139 bits (350), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + I Y++ ++ IGG + + L+ G +V GTP Sbjct 94 QALVLSPTRELATQIQSVIMALGDYMN---VQCHACIGGTNIGEDIRKLDYGQHVVSGTP 150 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 151 GRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 204 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P V +K ++ + + + V Sbjct 205 ATL-PYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------------- 246 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 247 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 279 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 280 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 334 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V ++ ++ Sbjct 335 VINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRI 374 Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 25 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGILQ 84 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 85 VIDTVVRETQ 94 >sp|Q2UAK1|FAL1_ASPOR ATP-dependent RNA helicase fal1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=fal1 PE=3 SV=1 Length=398 Score = 139 bits (350), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + I Y++ ++ IGG + + L+ G +V GTP Sbjct 94 QALVLSPTRELATQIQSVIMALGDYMN---VQCHACIGGTNIGEDIRKLDYGQHVVSGTP 150 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 151 GRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 204 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P V +K ++ + + + V Sbjct 205 ATL-PYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------------- 246 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 247 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 279 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 280 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 334 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V ++ ++ Sbjct 335 VINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRI 374 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 25 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 84 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 85 VIDTVVRESQ 94 >sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp10 PE=1 SV=1 Length=848 Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 108/342 (32%), Positives = 159/342 (46%), Gaps = 36/342 (11%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA QT+ +K F K D LR + I+GGV+ +Q S+L DIVV TP Sbjct 141 RALILSPNRELALQTVKVVKDFSKGTD---LRSVAIVGGVSLEEQFSLLSGKPDIVVATP 197 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L KL LS + ++V DEAD L G++ + + + +P Q ++ S Sbjct 198 GRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLTEILHALPTSR------QTLLFS 251 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL V ++ + P V L E V + V + ER Sbjct 252 ATLPRTLVD-FAKAGLQDPVLVRLDVESKVSADLQSAFFSV-----KTAEREAALLCILQ 305 Query 468 DV---HAKDNTRP----GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 D+ KDN RP N+P+ A+ E A++ + D ++F TK + Sbjct 306 DIIKLPLKDNVRPREIGNVNNPKKRKRAL-----ELALKGSESGSPDSTLVFVPTKHHVE 360 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + + +Q G +S ++G R + F+ G L+ TDVA+RGID Sbjct 361 YVSELLVQAG---------YSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRGID 411 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I + VIN P + + +VHR+GR RA R G A SLV E Sbjct 412 IPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAE 453 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 43/67 (64%), Gaps = 0/67 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + + PT IQ ++IPL+L G DV+ A TGSGKT AF IP+I+ Sbjct 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130 Query 64 VYETLKD 70 + TL + Sbjct 131 LKSTLAN 137 >sp|Q6C347|FAL1_YARLI ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=FAL1 PE=3 SV=1 Length=397 Score = 139 bits (349), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/336 (31%), Positives = 154/336 (46%), Gaps = 60/336 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+++ P+RELA Q + I Y++ ++ IGG + + LE G +V GTP Sbjct 94 QAMVLSPTRELATQIQSVILALGDYMN---VQCHACIGGTSLSVDMKKLEAGQQVVSGTP 150 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR D++ G L ++ L+LDEAD LL++G+ + I ++ +P T QV+V S Sbjct 151 GRCLDMIKKGCLRTKNLKMLILDEADELLNKGFQEQIYDIYRYLPAAT------QVVVVS 204 Query 408 ATL-HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 ATL HS V +++ K M P + +K ++ + + + V Sbjct 205 ATLPHS--VLEMTSKFMTDPVRILVKRDELTLEGLKQYFIAVEQ---------------- 246 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E W L Y I QA+IFC TK D L Q Sbjct 247 ----------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKKKVDWLTQQM 283 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 K + F+ +HGD +R + F+ G R LI TDV ARGID+ V Sbjct 284 ---------KDNNFTVCSMHGDMAQKDRDSIMNEFRSGRSRVLISTDVWARGIDVQQVSL 334 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 VIN LP ++NY+HRIGR GR R G+AI+ + Sbjct 335 VINYDLPPNRENYIHRIGRSGRFGRKGVAINFATND 370 Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + ++ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI +++ Sbjct 25 TFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLE 84 Query 63 IV 64 ++ Sbjct 85 VI 86 >sp|A7EM88|FAL1_SCLS1 ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=fal1 PE=3 SV=1 Length=399 Score = 139 bits (350), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + + Y++ ++ IGG + + L+ G IV GTP Sbjct 95 QALVLSPTRELATQIQSVVMALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHIVSGTP 151 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 152 GRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 205 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P + +K ++ + + + V Sbjct 206 ATL-PYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------------- 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 248 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 280 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 281 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V +E ++ Sbjct 336 VINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTSEDVRI 375 Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQ 85 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 86 VIDTAVRETQ 95 >sp|Q6BZ77|DBP3_DEBHA ATP-dependent RNA helicase DBP3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP3 PE=3 SV=1 Length=527 Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 109/342 (32%), Positives = 163/342 (48%), Gaps = 61/342 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K L + P+RELA Q +N+ N L+ + + GGV+ +Q+S L N +VV TP Sbjct 188 KVLCISPTRELALQIYDNLVDLTA---NTPLKCVAVYGGVSKHEQVSSLRNA-SVVVATP 243 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL++ G L+L + +LVLDEAD +L +G+ I + Q T+ R Q ++ + Sbjct 244 GRLIDLLNDGALSLDSIEYLVLDEADRMLEKGFEQDIKSVMQQ----TNHANR-QTLMFT 298 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTVHHVVVPVNP--KTDRLWERLGKSH 463 AT +V++L+ M+ P V + + E S + +V + P K +L L K Sbjct 299 ATWPK-EVRELASTFMNSPVKVSIGDRNELSANKRITQIVEVIEPYDKEKKLLSLLRKY- 356 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + G+N K D+ +IF K + +E Sbjct 357 ------------QSGSN------------------------KDDKVLIFALYKKEATRIE 380 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 ++ + F +HGD +R L FK G L+ TDVAARG+DI Sbjct 381 NLLVR---------NSFKVSAVHGDLSQQQRTSALGAFKAGKTTLLLATDVAARGLDIPN 431 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V VIN+T P ++YVHRIGR GRA + G+A +L TE EK Sbjct 432 VKVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLF-TEHEK 472 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F ++ + IA + + + PT IQA S P +L G DV+ AETGSGKT AF +P Sbjct 118 LLGFDQIDLDSRIASVISK--FPTPTPIQAVSWPYLLSGKDVIGVAETGSGKTFAFGVPA 175 Query 61 I 61 I Sbjct 176 I 176 >sp|Q9HXE5|RHLB_PSEAE ATP-dependent RNA helicase RhlB OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rhlB PE=3 SV=1 Length=397 Score = 139 bits (349), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 105/333 (32%), Positives = 156/333 (47%), Gaps = 58/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DIVVG 345 P+ALI+ P+REL Q + KY L + +GG+ QL LE DI+V Sbjct 85 PRALIIAPTRELVVQIAKDAAALTKYTG---LNVMTFVGGMDFDKQLKQLEARFCDILVA 141 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D G+++L V +VLDEAD +L G FI ++ I Q G+R Q ++ Sbjct 142 TPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMG---FIPQVRQIIRQTPHKGER-QTLL 197 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT DV L+++ P V+++ E+ DTV V V Sbjct 198 FSATFTD-DVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVA---------------- 240 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 S+ K+L + ++ ++ ++F K + +E+ Sbjct 241 -------------------GSDKYKLLYN-----LVAQNNWERVMVFANRKDEVRRIEER 276 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G S + GD H+R + LE F++G +R L+ TDVA RGI I G+ Sbjct 277 LTKDG---------ISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGIS 327 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN TLP++ +YVHRIGR GRA G +IS Sbjct 328 HVINFTLPEDPDDYVHRIGRTGRAGASGTSISF 360 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/64 (33%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + A+ ++ + T IQA+ + L G D + A+TG+GKT AF I +I Sbjct 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70 Query 64 VYET 67 + +T Sbjct 71 LLQT 74 >sp|Q02S21|RHLB_PSEAB ATP-dependent RNA helicase RhlB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=rhlB PE=3 SV=1 Length=397 Score = 139 bits (349), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 105/333 (32%), Positives = 156/333 (47%), Gaps = 58/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DIVVG 345 P+ALI+ P+REL Q + KY L + +GG+ QL LE DI+V Sbjct 85 PRALIIAPTRELVVQIAKDAAALTKYTG---LNVMTFVGGMDFDKQLKQLEARFCDILVA 141 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D G+++L V +VLDEAD +L G FI ++ I Q G+R Q ++ Sbjct 142 TPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMG---FIPQVRQIIRQTPHKGER-QTLL 197 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT DV L+++ P V+++ E+ DTV V V Sbjct 198 FSATFTD-DVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVA---------------- 240 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 S+ K+L + ++ ++ ++F K + +E+ Sbjct 241 -------------------GSDKYKLLYN-----LVAQNNWERVMVFANRKDEVRRIEER 276 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G S + GD H+R + LE F++G +R L+ TDVA RGI I G+ Sbjct 277 LTKDG---------ISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGIS 327 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN TLP++ +YVHRIGR GRA G +IS Sbjct 328 HVINFTLPEDPDDYVHRIGRTGRAGASGTSISF 360 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/64 (33%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + A+ ++ + T IQA+ + L G D + A+TG+GKT AF I +I Sbjct 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70 Query 64 VYET 67 + +T Sbjct 71 LLQT 74 >sp|B7UUT0|RHLB_PSEA8 ATP-dependent RNA helicase RhlB OS=Pseudomonas aeruginosa (strain LESB58) OX=557722 GN=rhlB PE=3 SV=1 Length=397 Score = 139 bits (349), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 105/333 (32%), Positives = 156/333 (47%), Gaps = 58/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DIVVG 345 P+ALI+ P+REL Q + KY L + +GG+ QL LE DI+V Sbjct 85 PRALIIAPTRELVVQIAKDAAALTKYTG---LNVMTFVGGMDFDKQLKQLEARFCDILVA 141 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D G+++L V +VLDEAD +L G FI ++ I Q G+R Q ++ Sbjct 142 TPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMG---FIPQVRQIIRQTPHKGER-QTLL 197 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT DV L+++ P V+++ E+ DTV V V Sbjct 198 FSATFTD-DVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVA---------------- 240 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 S+ K+L + ++ ++ ++F K + +E+ Sbjct 241 -------------------GSDKYKLLYN-----LVAQNNWERVMVFANRKDEVRRIEER 276 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G S + GD H+R + LE F++G +R L+ TDVA RGI I G+ Sbjct 277 LTKDG---------ISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGIS 327 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN TLP++ +YVHRIGR GRA G +IS Sbjct 328 HVINFTLPEDPDDYVHRIGRTGRAGASGTSISF 360 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/64 (33%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + A+ ++ + T IQA+ + L G D + A+TG+GKT AF I +I Sbjct 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70 Query 64 VYET 67 + +T Sbjct 71 LLQT 74 >sp|A7MQI2|RHLB_CROS8 ATP-dependent RNA helicase RhlB OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=rhlB PE=3 SV=1 Length=421 Score = 139 bits (351), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 113/359 (31%), Positives = 172/359 (48%), Gaps = 66/359 (18%) Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 Y++ + N QV Q P+ALI+ P+RELA Q ++ + + ++ L Sbjct 70 YLLSHPAAENRQVNQ-------PRALIMAPTRELAVQIHSDAEPLAEATG---IKLGLAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 120 GGDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMYDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HH 443 + ++P T +RL ++ SATL S+ V++L+ + M+ +V+++ E + Sbjct 180 RWLFRRMPAAT---ERLNMLF-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N + RL + L I+E Sbjct 235 LFYPSNEEKMRLLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AIIF TK C+++ G GH+ L GD +R + L+ F + Sbjct 254 EWPDRAIIFANTKHRCEDI-------WGHLAADGHRVGL--LTGDVAQKKRLRILDEFTR 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 GD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 305 GDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + QA+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPVVVQALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|A6TGG9|RHLB_KLEP7 ATP-dependent RNA helicase RhlB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) OX=272620 GN=rhlB PE=3 SV=1 Length=421 Score = 139 bits (350), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 109/339 (32%), Positives = 164/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P T +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAT---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 ++E D+AI+F TK C+++ Sbjct 251 -------------------------------------LEEEWPDRAIVFANTKHRCEDI- 272 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G GH+ L GD +R + LE F +GD+ L+ TDVAARG+ I Sbjct 273 ------WGHLAADGHRVGL--LTGDVAQKKRLRILEEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKTMAF 63 >sp|A6VKC3|RHLB_ACTSZ ATP-dependent RNA helicase RhlB OS=Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z) OX=339671 GN=rhlB PE=3 SV=1 Length=413 Score = 139 bits (350), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 106/340 (31%), Positives = 164/340 (48%), Gaps = 57/340 (17%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q F+ N P+ALI+ P+RELA Q ++ + + KLR L GG QL +EN Sbjct 75 QPDFITNQPRALILAPTRELAVQIAHDAESLAQ---TTKLRIALAYGGDGYDKQLKTIEN 131 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 GVDI++GT GR+ D V G + + ++ +VLDEAD + G+ I + + P S Sbjct 132 GVDILIGTTGRVIDYVKQGIIRFNDIQVVVLDEADRMFDLGFIKDIRYLLRKCPAPKS-- 189 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 RL ++ SATL S+ V++L+ + M+ P +++++ P+ R+ E Sbjct 190 -RLTMLF-SATL-SYKVRELAFEDMNDPEYIEIE--------------PLQKTGHRIKEE 232 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 L R + + + +L+ E+ R IIF TK Sbjct 233 LFYPSNR-----------------DKMALLMTLLEEEWPER---------CIIFANTKHR 266 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 C+ + Y G L GD +R L++F G++ L+ TDVAARG Sbjct 267 CEEIWGYLAADGQ---------RVGLLTGDVAQKKRLALLKQFTDGELDILVATDVAARG 317 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + I V +V N LPD++++YVHRIGR GRA G++IS Sbjct 318 LHIPDVTHVFNYDLPDDREDYVHRIGRTGRAGESGMSISF 357 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++ + P+I A+ + ++ T IQA S+PL L G DV A+TG+GKT AF Sbjct 11 FADLPLHPQILAALNDQNFEYCTPIQALSLPLTLQGKDVAGQAQTGTGKTMAF 63 >sp|A1D071|FAL1_NEOFI ATP-dependent RNA helicase fal1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=fal1 PE=3 SV=1 Length=399 Score = 139 bits (349), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + I Y++ ++ IGG + + L+ G +V GTP Sbjct 95 QALVLSPTRELATQIQSVIMALGDYMN---VQCHACIGGTNIGEDIRKLDYGQHVVSGTP 151 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 152 GRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 205 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P V +K ++ + + + V Sbjct 206 ATL-PYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------------- 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 248 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 280 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 281 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V ++ ++ Sbjct 336 VINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRI 375 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 86 VIDTVVRETQ 95 >sp|Q5AUL4|FAL1_EMENI ATP-dependent RNA helicase fal1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=fal1 PE=3 SV=1 Length=399 Score = 139 bits (349), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + I Y++ ++ IGG + + L+ G +V GTP Sbjct 95 QALVLSPTRELATQIQSVIMALGDYMN---VQCHACIGGTNIGEDIRKLDYGQHVVSGTP 151 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 152 GRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 205 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P V +K ++ + + + V Sbjct 206 ATL-PYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------------- 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 248 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 280 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 281 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V ++ ++ Sbjct 336 VINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRI 375 Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI +Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 86 VIDTVVRETQ 95 >sp|C6DHF5|RHLB_PECCP ATP-dependent RNA helicase RhlB OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=rhlB PE=3 SV=1 Length=430 Score = 139 bits (350), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 113/353 (32%), Positives = 169/353 (48%), Gaps = 64/353 (18%) Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 H NA+ QT N P+ALI+ P+RELA Q ++ + L+ L GG Sbjct 74 HPANAE-RQT----NQPRALIMAPTRELAVQIHSDAEALSHLTG---LKLGLAYGGDGYD 125 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 QL VLENGVDI++GT GRL D +NL ++ +VLDEAD + G+ I + + Sbjct 126 KQLKVLENGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRR 185 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVN 449 +P +RL ++ SATL S+ V++L+ + M+ +V+++ E + + P N Sbjct 186 MPPA---AQRLNMLF-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN 240 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + RL + L ++E D+ Sbjct 241 EEKMRLLQTL-----------------------------------------LEEEWPDRC 259 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIF TK C+++ G GH+ L GD +R + LE F +G++ L Sbjct 260 IIFANTKHRCEDI-------WGHLAADGHRVGL--LTGDVAQKKRLRILEEFTQGNLDIL 310 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G +ISL E Sbjct 311 VATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGQSGFSISLACEE 363 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVIEALESKGFHNCTPIQALALPLALSGRDVAGQAQTGTGKTLAF 63 >sp|Q2U070|DBP2_ASPOR ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp2 PE=3 SV=1 Length=554 Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 101/341 (30%), Positives = 168/341 (49%), Gaps = 55/341 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 202 DGPIVLVLAPTRELAVQIQAEITKFGK---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 258 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ I Q+ D Q Sbjct 259 ATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI---ISQIRPD---RQTC 312 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V++L+ ++ D + + + + N + ++ E + Sbjct 313 MWSATWPK-EVRQLASDFLN----------DYIQVNIGSMDLSANHRITQIVEVVS---- 357 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 D +D K++K + I E++ ++ +IF TK D + + Sbjct 358 ---DFEKRD----------------KMIK---HLEKIMENRGNKCLIFTGTKRIADEITR 395 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD++ ER L FK G ++ TDVA+RGID+ + Sbjct 396 -FLRQDGWP--------ALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDI 446 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +V+N P+ ++YVHRIGR GRA G AI+ T+ K Sbjct 447 THVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSK 487 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 33/59 (56%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT ++ +P I Sbjct 131 TFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 189 >sp|A1C6C4|DBP2_ASPCL ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp2 PE=3 SV=1 Length=549 Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 102/342 (30%), Positives = 166/342 (49%), Gaps = 57/342 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q I +F K + ++R + GGV Q+ L GV++ + Sbjct 197 DGPIVLVLAPTRELAVQIQTEITKFGK---SSRIRNTCVYGGVPKGPQIRDLSRGVEVCI 253 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ I Q+ D Q Sbjct 254 ATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI---ISQIRPD---RQTC 307 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SAT +V++L+ ++ V++ D S + +V V+ Sbjct 308 MWSATWPK-EVRQLASDFLNDYIQVNIGSMDLSANHRITQIVEVVS-------------- 352 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 D +D K++K + I E + ++ +IF TK D + Sbjct 353 ----DFEKRD----------------KMIK---HLEKIMEDRSNKILIFTGTKRIADEIT 389 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + F++Q G P + +HGD++ ER L FK G ++ TDVA+RGID+ Sbjct 390 R-FLRQDGWP--------ALSIHGDKQQQERDWVLNEFKAGKSPIMVATDVASRGIDVRD 440 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +V+N P+ ++Y+HRIGR GRA G AI+ T+ K Sbjct 441 ITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSK 482 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 32/59 (54%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 126 TFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 184 >sp|Q10I26|IF43B_ORYSJ Eukaryotic initiation factor 4A-III homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=EIF4A3B PE=1 SV=1 Length=404 Score = 139 bits (349), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/358 (29%), Positives = 165/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA QT + YI+ ++ IGG + + + LE+GV +V GTP Sbjct 101 QALILSPTRELAAQTERVMLAIGDYIN---IQVHACIGGKSIGEDIRKLEHGVHVVSGTP 157 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ L+LDEAD +L +G+ D I ++ +P LQV + S Sbjct 158 GRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLP------PELQVCLIS 211 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V Sbjct 212 ATL-PHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------------- 253 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W K + + QA+IFC TK D L + Sbjct 254 ---------------EEW-------KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERM- 290 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + + F+ +HGD ER + F+ G R LI TDV ARG+D+ V V Sbjct 291 --------RSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLV 342 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V E ++ + + Y+T++ E Sbjct 343 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDI-----EQYYSTQIDE 395 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 43/72 (60%), Gaps = 0/72 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F +MG+ ++ + + + P+ IQ ++ I+ G DV+ A++G+GKT S+ V Sbjct 30 ISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSV 89 Query 61 IQIVYETLKDQQ 72 QIV +++ Q Sbjct 90 CQIVDTAVREVQ 101 >sp|A6S4N4|FAL1_BOTFB ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=fal1 PE=3 SV=1 Length=399 Score = 138 bits (348), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + + Y++ ++ IGG + + L+ G IV GTP Sbjct 95 QALVLSPTRELATQIQSVVMALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHIVSGTP 151 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 152 GRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 205 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P + +K ++ + + + V Sbjct 206 ATL-PYDVLDMTTKFMTDPVRILVKRDELTLEGLKQYFIAVEK----------------- 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 248 ---------------EDWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 280 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 281 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V +E ++ Sbjct 336 VINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTSEDVRI 375 Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQ 85 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 86 VIDTAVRETQ 95 >sp|Q0CAS8|FAL1_ASPTN ATP-dependent RNA helicase fal1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=fal1 PE=3 SV=1 Length=399 Score = 138 bits (348), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + I Y++ ++ IGG + + L+ G +V GTP Sbjct 95 QALVLSPTRELATQIQSVIMALGDYMN---VQCHACIGGTNIGEDIRKLDYGQHVVSGTP 151 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 152 GRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 205 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P V +K ++ + + + V Sbjct 206 ATL-PYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------------- 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 248 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 280 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 281 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V ++ ++ Sbjct 336 VINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRI 375 Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust. Identities = 17/70 (24%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT F+I ++Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQ 85 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 86 VIDTVVRESQ 95 >sp|A1C595|FAL1_ASPCL ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=fal1 PE=3 SV=1 Length=399 Score = 138 bits (348), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + I Y++ ++ IGG + + L+ G +V GTP Sbjct 95 QALVLSPTRELATQIQSVIMALGDYMN---VQCHACIGGTNIGEDIRKLDYGQHVVSGTP 151 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 152 GRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 205 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P V +K ++ + + + V Sbjct 206 ATL-PYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------------- 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 248 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 280 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 281 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V ++ ++ Sbjct 336 VINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRI 375 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 86 VIDTAVRETQ 95 >sp|A5AAE5|FAL1_ASPNC ATP-dependent RNA helicase fal1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=fal1 PE=3 SV=2 Length=399 Score = 138 bits (348), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 104/340 (31%), Positives = 160/340 (47%), Gaps = 60/340 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + I Y++ ++ IGG + + L+ G +V GTP Sbjct 95 QALVLSPTRELATQIQSVIMALGDYMN---VQCHACIGGTNIGEDIRKLDYGQHVVSGTP 151 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD LL++G+ + I ++ +P T QV+V S Sbjct 152 GRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPAT------QVVVVS 205 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL +DV ++ K M P V +K ++ + + + V Sbjct 206 ATL-PYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAVEK----------------- 247 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC T+ D L Sbjct 248 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTRRKVDWL----- 280 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + F+ +HG+ ER ++ F++G+ R LI TDV ARGID+ V Sbjct 281 -----TDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP ++NY+HRIGR GR R G+AI+ V ++ ++ Sbjct 336 VINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRI 375 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 18/70 (26%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IVYETLKDQQ 72 ++ +++ Q Sbjct 86 VIDTVVRESQ 95 >sp|P96614|CSHA_BACSU DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus subtilis (strain 168) OX=224308 GN=cshA PE=1 SV=2 Length=494 Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 114/396 (29%), Positives = 185/396 (47%), Gaps = 70/396 (18%) Query 281 KFLPNAP--KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K P +P +A+++ P+RELA Q ++ K + + + L I GG Q+ L+ Sbjct 64 KINPESPNIQAIVIAPTRELAIQVS---EELYKIGQDKRAKVLPIYGGQDIGRQIRALKK 120 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 +I+VGTPGRL D ++ + L+ V +V+DEAD +L+ G+ D I + + +P Sbjct 121 NPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPS----- 175 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN--PKTDRLW 456 Q ++ SAT+ + +K+++E+ M P V +K ++ + + V K D L Sbjct 176 -EHQTLLFSATMPA-PIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLT 233 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 L D+ SPE+ AI+F RTK Sbjct 234 RLL--------DIQ----------SPEL------------------------AIVFGRTK 251 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 D L + +G ++ +HGD +R L +FK+G + L+ TDVAA Sbjct 252 RRVDELAEALNLRG---------YAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAA 302 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RG+DI GV +V N +P + ++YVHRIGR GRA + G+A++ + T +EK K Sbjct 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFI-TPREKSMLRAIEQTTK 361 Query 637 GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 + R+KE + Q+ E L TIS+ Sbjct 362 RKMD-RMKEPTLDEALEGQQQVTV---ERLRTTISE 393 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ +A+ M + T IQA++IPL L DV+ A+TG+GKT AF IP+++ Sbjct 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63 >sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DED1 PE=3 SV=1 Length=650 Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 103/334 (31%), Positives = 158/334 (47%), Gaps = 59/334 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+RELA Q + + KK+ +R ++ GG Q+ L G D++V T Sbjct 244 PTALVLAPTRELATQIYD---EAKKFTYRSWVRPTVVYGGSDIGSQIRDLSRGCDLLVAT 300 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN--QIPQVTSDGKRLQVI 404 PGRL DL+ G+++L+ V++LVLDEAD +L G+ I ++ + +P V G+R Q + Sbjct 301 PGRLSDLLERGRVSLANVKYLVLDEADRMLDMGFEPQIRQIVDGCDMPPV---GER-QTL 356 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + D + D + V V ++ + +R+ + Sbjct 357 MFSAT---------------FPDDIQHLARDFLSDYIFLSVGKVGSTSENITQRI----L 397 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +D+ K S + +L +IF TK D L Sbjct 398 YVEDMDKK-------------STLLDLLSAS---------NDGLTLIFVETKRMADELTD 435 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ L FK G+ L+ T VAARG+DI V Sbjct 436 FLIMQ---------DFRATAIHGDRTQSERERALAAFKNGNANLLVATAVAARGLDIPNV 486 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +V+N LP + +YVHRIGR GRA G+A + Sbjct 487 THVVNYDLPSDIDDYVHRIGRTGRAGNTGVATAF 520 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 18/37 (49%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT +Q S+P++ G D++ A+TGSGKTG F PV+ Sbjct 183 PTPVQKYSVPIVSRGRDLMACAQTGSGKTGGFLFPVL 219 >sp|A4RHF1|DED1_PYRO7 ATP-dependent RNA helicase DED1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DED1 PE=3 SV=2 Length=671 Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 153/334 (46%), Gaps = 58/334 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + + +K+ +R ++ GG QL +E G D++V T Sbjct 275 PTSLILAPTRELVSQIYD---ESRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 331 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++LVLDEAD +L G+ I R+ +P V + Q + Sbjct 332 PGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPNV----QDRQTL 387 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP ++ D + D + V V ++ + +R+ + Sbjct 388 MFSAT---------------FPGYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKH 432 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R D + + + + H +IF TK + D L Sbjct 433 RDDKI-------------------------SHLLDLLSTHGGGLTLIFVETKRNADELSD 467 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + Q +HGDR ER++ LE F+ G L+ T VAARG+DI V Sbjct 468 FLQNQ---------NLPATSIHGDRTQRERERALEMFRTGRCPILVATAVAARGLDIPNV 518 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + +YVHRIGR GRA G+A + Sbjct 519 THVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF 552 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 22/65 (34%), Positives = 39/65 (60%), Gaps = 0/65 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + + +E + +PT +Q S+P+++GG D++ A+TGSGKTG F P++ Sbjct 188 TFSNPPLDDHLISNIELARYKVPTPVQKYSVPIVMGGRDLMACAQTGSGKTGGFLFPILS 247 Query 63 IVYET 67 ++T Sbjct 248 QAFKT 252 >sp|Q1DJF0|DED1_COCIM ATP-dependent RNA helicase DED1 OS=Coccidioides immitis (strain RS) OX=246410 GN=DED1 PE=3 SV=2 Length=665 Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 155/334 (46%), Gaps = 59/334 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQF--KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 P +LI+ P+REL Q + ++F + ++ R ++ GG QL +E G D++V Sbjct 269 PTSLILAPTRELVSQIYDEARKFAYRSWV-----RPCVVYGGADIGSQLRQIERGCDLLV 323 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL DL+ G+++L +++LVLDEAD +L G+ I R+ +G+ Q + Sbjct 324 ATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPPVNGR--QTL 381 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + D + D V V V ++ + +++ ++ Sbjct 382 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKV--EYV 424 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 D K + + H +IF TK D+L + Sbjct 425 EDAD------------------------KRSVLLDILHTHGTGLTLIFVETKRMADSLSE 460 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ LE F+ G L+ T VAARG+DI V Sbjct 461 FLINQ---------NFPATAIHGDRTQRERERALEYFRNGRCPILVATAVAARGLDIPNV 511 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +V+N LP + +YVHRIGR GRA GL+ + Sbjct 512 THVVNYDLPTDIDDYVHRIGRTGRAGNTGLSTAF 545 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 30/42 (71%), Gaps = 0/42 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 PT +Q SIP+++GG D++ A+TGSGKTG F P++ ++ Sbjct 204 PTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQAFK 245 >sp|Q5L3G9|CSHA_GEOKA DEAD-box ATP-dependent RNA helicase CshA OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=cshA PE=3 SV=1 Length=467 Score = 139 bits (351), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 100/347 (29%), Positives = 168/347 (48%), Gaps = 61/347 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 +A +AL+V P+RELA Q + + ++R L I GG Q+ L+ ++V Sbjct 69 SAVQALVVAPTRELAIQVSEELYKIGAV---KRVRVLPIYGGQDIERQIRALKKHPHVIV 125 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ D ++ G L L V +VLDEAD +L+ G+ + I + + +P Q + Sbjct 126 GTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVP------AERQTL 179 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SAT+ +++++E+ M+ P V +K ++ +VP+ + + Sbjct 180 LFSATMPD-PIRRIAERFMNEPELVKVKAKEMTVPNIQQYYL------------------ 220 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +VH K K + R + + AI+F RTK D L Sbjct 221 ----EVHEKK-------------------KFDILTRLLDIQAPELAIVFGRTKRRVDELA 257 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + +G ++ +HGD +R L +FK+G + L+ TDVAARG+DI G Sbjct 258 EALNLRG---------YAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISG 308 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V +V N +P + ++YVHRIGR GRA + G+A++ V + +H+ Sbjct 309 VTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHI 355 Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ E+ +A+E M + T IQA++IPL L DV+ A+TG+GKT AF IP+ Sbjct 1 MTTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI 60 Query 61 IQIV 64 ++ V Sbjct 61 VEKV 64 >sp|Q62167|DDX3X_MOUSE ATP-dependent RNA helicase DDX3X OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=3 Length=662 Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 155/333 (47%), Gaps = 56/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +L++ P+RELA Q ++F ++R ++ GG Q+ LE G ++V T Sbjct 267 PISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGAEIGQQIRDLERGCHLLVAT 323 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ GK+ L ++LVLDEAD +L G+ I R+ Q + G R ++ Sbjct 324 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ-DTMPPKGVR-HTMMF 381 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + D + + + V V ++ + +++ Sbjct 382 SAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------- 419 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQY 525 +W E I K + + + D ++F TK D+LE + Sbjct 420 -----------------VWVEEID--KRSFLLDLLNATGKDSLTLVFVETKKGADSLEDF 460 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V Sbjct 461 LYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVK 511 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + + YVHRIGR GR +GLA S Sbjct 512 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 544 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS++ + I +E + PT +Q +IP+I D++ A+TGSGKT AF +P+ Sbjct 179 IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPI 238 Query 61 IQIVY-----ETLKDQQE-GKKGK 78 + +Y E L+ +E G+ G+ Sbjct 239 LSQIYADGPGEALRAMKENGRYGR 262 >sp|Q88NB7|RHLB_PSEPK ATP-dependent RNA helicase RhlB OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=rhlB PE=3 SV=1 Length=398 Score = 138 bits (347), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 103/333 (31%), Positives = 158/333 (47%), Gaps = 58/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVG 345 P+ALI+ P+REL Q + KY L + +GG+ QL LE DI+V Sbjct 85 PRALIIAPTRELVVQIAKDAAALTKYTG---LNVMSFVGGMDFDKQLKALEARHCDILVA 141 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D G+++L V +VLDEAD +L G FI ++ I Q +R Q ++ Sbjct 142 TPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMG---FIPQVRQIIRQTPPKSER-QTLL 197 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT + DV L+++ P V+++ E+ +TV V V Sbjct 198 FSATF-TDDVMNLAKQWTTNPAIVEIEPENVASETVEQHVYAV----------------- 239 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 S+ K+L + ++K ++ ++F K + +E+ Sbjct 240 ------------------AGSDKYKLLYN-----LVTQNKWERVMVFANRKDEVRRIEEK 276 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 ++ G + L GD H+R + LE F++G + L+ TDVA RGI I G+ Sbjct 277 LVRDG---------INAAQLSGDVPQHKRIRTLESFREGRITVLVATDVAGRGIHIDGIS 327 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN TLP++ +YVHRIGR GRA G++IS Sbjct 328 HVINFTLPEDPDDYVHRIGRTGRAGTSGVSISF 360 Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/64 (33%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ A+ ++ + T IQA+ + L G D + A+TG+GKT AF I +I Sbjct 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70 Query 64 VYET 67 + +T Sbjct 71 LQQT 74 >sp|Q9CAI7|IF4A3_ARATH Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana OX=3702 GN=TIF4A-3 PE=1 SV=1 Length=414 Score = 138 bits (347), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 101/344 (29%), Positives = 163/344 (47%), Gaps = 60/344 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ VL++GV +VVGTP Sbjct 111 QALVLAPTRELAQQIEKVMRALGDYL---GVKAQACVGGTSVREDQRVLQSGVHVVVGTP 167 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 168 GRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLP------SKVQVGVFS 221 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K ++ + + V V+ Sbjct 222 ATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVD------------------ 262 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 263 --------------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 296 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 297 -----TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 351 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VIN LP + +NY+HRIGR GR R G+AI+ + +E E++ + Sbjct 352 VINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADI 395 Score = 34.7 bits (78), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 31/60 (52%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + P++ + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 42 SFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQ 101 >sp|B7VME9|RHLB_VIBA3 ATP-dependent RNA helicase RhlB OS=Vibrio atlanticus (strain LGP32) OX=575788 GN=rhlB PE=3 SV=1 Length=436 Score = 139 bits (349), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 113/337 (34%), Positives = 164/337 (49%), Gaps = 59/337 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 PN P+A+I+ P+RELA Q N+ + + ++ L GG + QL +E G DI+ Sbjct 82 PNQPRAIIMAPTRELAIQIYNDADSL---VASTGIKAALAYGGESYDKQLGKIEEGADIL 138 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +GT GR+ D NL+ ++ +VLDEAD + G+ I + ++P+ RL + Sbjct 139 IGTTGRIIDFYKQKVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKD---RLNM 195 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT-DRLWERLGKS 462 + SATL S+ V++L+ + MH P HVVV KT R+ E L Sbjct 196 LF-SATL-SYRVQELAFEHMHNP---------------EHVVVEPERKTGHRIQEELFYP 238 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 S E ++ L I+E D+AIIF TK C+++ Sbjct 239 ------------------SNEHKMALLQTL--------IEEEWPDRAIIFANTKHKCESV 272 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 G GH+ L GD +R++ LE+F KGDV L+ TDVAARG+ I Sbjct 273 -------WGHLAADGHRVGL--LTGDVPQKKREKILEQFTKGDVDLLVATDVAARGLHIP 323 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V +V N LPD+ ++YVHRIGR GRA G +IS Sbjct 324 QVTHVFNFDLPDDCEDYVHRIGRTGRAGESGHSISFA 360 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/73 (32%), Positives = 45/73 (62%), Gaps = 2/73 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ ++P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLDLLPQVIEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKK 76 + +T + EG+K Sbjct 71 LLKT--PEHEGRK 81 >sp|B5XYY9|RHLB_KLEP3 ATP-dependent RNA helicase RhlB OS=Klebsiella pneumoniae (strain 342) OX=507522 GN=rhlB PE=3 SV=1 Length=421 Score = 138 bits (347), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 109/339 (32%), Positives = 164/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P T +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAT---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 ++E D+AIIF TK C+++ Sbjct 251 -------------------------------------LEEEWPDRAIIFANTKHRCEDI- 272 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G GH+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 273 ------WGHLAADGHRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGNSISLACEE 363 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKTMAF 63 >sp|B1KQF6|RHLB_SHEWM ATP-dependent RNA helicase RhlB OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=rhlB PE=3 SV=1 Length=441 Score = 139 bits (349), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 108/338 (32%), Positives = 168/338 (50%), Gaps = 57/338 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q VL+ GVDI++ Sbjct 83 NQPRAMIMAPTRELAIQIAKDATLLAKHTG---LKVGIVYGGESYDVQRKVLDKGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G +NLS ++ +VLDEAD + G+ I + ++P D K + Sbjct 140 GTTGRIIDYVRQGIINLSAIQAVVLDEADRMFDLGFIKDIRFLFRRMP----DAKSRLNM 195 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SATL S V++L+ M+ P VV+ N KT + Sbjct 196 LFSATL-SMKVQELAYDHMNEP---------------EKVVIAPNEKTSK---------- 229 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 N + P M E +++L + I+E ++AI+F TK C+N+ Sbjct 230 ---------NIKEEIFYPSM-DEKMRLL-----LSLIEEDWPEKAIVFSNTKHSCENVWS 274 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + GH+ L GD +R + LE+F +G + L+ TDVAARG+ I V Sbjct 275 WL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTEGKLDILVATDVAARGLHISDV 325 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA + G+++S E Sbjct 326 SHVYNYDLPDDCEDYVHRIGRTGRAGKKGVSVSFACEE 363 Score = 40.4 bits (93), Expect = 0.057, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F++ + EI A+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFSLNKEIKTALNESGFEFCTPIQALSLPILLQKKDIAGQAQTGTGKTLAFLV 65 >sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DED1 PE=3 SV=1 Length=664 Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 99/342 (29%), Positives = 161/342 (47%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+REL Q + + KK+ +R ++ GG +Q+ L+ G D++V T Sbjct 259 PTILVMAPTRELVSQIYD---ESKKFAYRSWVRPCVVYGGADIGNQIRQLDRGCDLLVAT 315 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL DL+ G+++L+ +++LVLDEAD +L G+ I + + +P V + Q + Sbjct 316 PGRLKDLLERGRVSLANIKYLVLDEADRMLDMGFEPQIRHIVQECDMPDV----QDRQTL 371 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + D + D + V V ++ + +++ Sbjct 372 MFSAT---------------FPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKV----- 411 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 ++ +D E S + +L + I+F TK DNL Sbjct 412 ----LYVEDE--------EKKSVILDLLNA---------NSEGLTIVFTETKRMADNLAD 450 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + QG F +HGDR +ER++ L FK G L+ T VAARG+DI V Sbjct 451 FLYDQG---------FPATAIHGDRSQYEREKALAAFKSGQAPILVATAVAARGLDIPNV 501 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +VIN LP + +YVHRIGR GRA +G+A + + + Sbjct 502 SHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNI 543 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 27/41 (66%), Gaps = 0/41 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 PT +Q S+P++ G D++ A+TGSGKTG F PV+ Y Sbjct 198 PTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESY 238 >sp|A7EJY3|DED1_SCLS1 ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=ded1 PE=3 SV=1 Length=678 Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 155/334 (46%), Gaps = 59/334 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + + +K+ +R ++ GG QL +E G D++V T Sbjct 272 PTSLILAPTRELVSQIFD---ESRKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVAT 328 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++LVLDEAD +L G+ I R+ +P V + Q + Sbjct 329 PGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPGV----QNRQTL 384 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + D + D V V V ++ + +++ Sbjct 385 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKV----- 424 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + +D I K + + H +IF TK D+L Sbjct 425 ----EYVED-----------------IDKRSVLLDILHTHGAGLTLIFVETKRMADSLSD 463 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ LE F+ G L+ T VAARG+DI V Sbjct 464 FLINQ---------NFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNV 514 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +V+N LP + +YVHRIGR GRA G++ + Sbjct 515 THVVNYDLPTDIDDYVHRIGRTGRAGNTGISTAF 548 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 0/55 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 + + +E + +PT +Q SIP+++GG D++ A+TGSGKTG F P++ ++T Sbjct 197 LIKNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQAFQT 251 >sp|A6R3L3|DED1_AJECN ATP-dependent RNA helicase DED1 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DED1 PE=3 SV=1 Length=694 Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 98/339 (29%), Positives = 159/339 (47%), Gaps = 58/339 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+REL Q + + +K+ L ++ GG +QL L+ G +++V T Sbjct 287 PTALILGPTRELVSQIYD---EARKFCYRTALHPRVVYGGAEMGNQLRQLDQGCNVLVAT 343 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL D++ G+++L+ +++LVLDEAD +L G+ I R+ + +P D Q + Sbjct 344 PGRLVDMMERGRISLAHIQYLVLDEADRMLDMGFEPQIRRIVQGSDMP----DKHMRQTL 399 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT D++KL+E+ + ++ + S + + +V D+ L Sbjct 400 MFSATFPP-DIQKLAEEFLKDHIFLSVGRVGSTSENITQRIVECESDKDKDSALL----- 453 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 D+ D+T ++F TK D L Sbjct 454 ---DILCSDST-------------------------------GLTLVFVETKRQADMLSD 479 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + H+ +HGDR ER++ LE F+ G L+ T VAARG+DI V Sbjct 480 FLLD---------HRLPATAIHGDRTQRERERALELFRTGRCPILVATAVAARGLDIPNV 530 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 +VIN LP+E +YVHRIGR GRA G++ + + K Sbjct 531 THVINYDLPNEIDDYVHRIGRTGRAGNTGISTAFFSRSK 569 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 42/77 (55%), Gaps = 0/77 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + + + + +PT +Q SIP+++GG D++ A+TGSGKTG F P+ Sbjct 202 ITAFTNPPLHEHLLSNIVLARYTVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPI 261 Query 61 IQIVYETLKDQQEGKKG 77 + T + E +G Sbjct 262 LSQSLHTRGPEAEAARG 278 >sp|A7MXT4|RHLB_VIBC1 ATP-dependent RNA helicase RhlB OS=Vibrio campbellii (strain ATCC BAA-1116) OX=2902295 GN=rhlB PE=3 SV=1 Length=437 Score = 138 bits (348), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 112/337 (33%), Positives = 167/337 (50%), Gaps = 59/337 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+A+I+ P+RELA Q N+ I + L+ L GG + QL+ L++GVDI+ Sbjct 82 PTQPRAIIMAPTRELAIQIFNDAAPL---IASTGLKAALAYGGESYDKQLAKLQDGVDIL 138 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +GT GR+ D NL+ ++ +VLDEAD + G+ I + ++P+ +RL + Sbjct 139 IGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMPE---PKERLNM 195 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT-DRLWERLGKS 462 + SATL S+ V++L+ + MH P HVVV KT R+ E L Sbjct 196 LF-SATL-SYRVQELAFEHMHNP---------------EHVVVEPEQKTGHRIQEEL--F 236 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + +D A T I+E D+AI+F TK C+++ Sbjct 237 YPSNEDKMALLQT------------------------LIEEEWPDRAIVFANTKHKCESI 272 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 G GH+ L GD +R++ LE+F +G+V L+ TDVAARG+ I Sbjct 273 -------WGHLAADGHRVGL--LTGDVPQKKREKILEQFTRGEVDLLVATDVAARGLHIP 323 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V +V N LPD+ ++YVHRIGR GRA G +IS Sbjct 324 QVTHVFNFDLPDDCEDYVHRIGRTGRAGASGHSISFA 360 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/73 (33%), Positives = 44/73 (60%), Gaps = 2/73 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLKPQVTEGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKK 76 + T + EG+K Sbjct 71 LLTT--PEHEGRK 81 >sp|A4WG30|RHLB_ENT38 ATP-dependent RNA helicase RhlB OS=Enterobacter sp. (strain 638) OX=399742 GN=rhlB PE=3 SV=1 Length=421 Score = 138 bits (347), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 109/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQ---TTGLKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPTP---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + LE F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILEDFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + ++ +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHAKVIEALENKGFHYCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|C4K8M8|RHLB_HAMD5 ATP-dependent RNA helicase RhlB OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) OX=572265 GN=rhlB PE=3 SV=1 Length=422 Score = 138 bits (347), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 113/379 (30%), Positives = 180/379 (47%), Gaps = 69/379 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ALI+ P+RELA Q + + ++ L+ L GG QL +LE+GVDI++GT Sbjct 85 PRALIMVPTRELAIQIYTDAETLSQFT---SLKMGLAYGGDGYDKQLKILESGVDILIGT 141 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D ++L+ ++ +VLDEAD + G+ I + ++P KRL ++ Sbjct 142 PGRIIDYAKQNFIHLNALQVIVLDEADRMYDLGFIKDIRWLFRRMPPAE---KRLNMLF- 197 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 SATL S+ V++LS + M+ P +++++ + + + P N RL + L Sbjct 198 SATL-SYRVRELSFEQMNHPEYIEVEPLQKIGSQIQEELFYPSNEDKMRLLQTL------ 250 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 I+E D+ IIF TK C+++ + Sbjct 251 -----------------------------------IEEEWPDRCIIFANTKQRCEDIWGH 275 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + GH+ L GD +R Q L+ F KG + L+ TDVAARG+ I V Sbjct 276 LV-------ADGHRVG--LLTGDVAQRKRIQILDDFSKGYLDILVATDVAARGLHIPKVT 326 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 +V N LP+ ++Y+HRIGR GRA G +ISL E H+ S + C R+ Sbjct 327 HVFNYDLPENVEDYIHRIGRTGRAGEKGYSISLAC---EAFASHL--STIEACTGHRIP- 380 Query 646 DGGCTIWYNEMQLLSEIEE 664 T YN+ LL+++ + Sbjct 381 ----TSEYNKEALLTDLPQ 395 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/68 (37%), Positives = 36/68 (53%), Gaps = 0/68 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA S P+ L G DV A+TG+GKT AF V Sbjct 11 FSDFALHPLVIKAIENQGFYHCTPIQALSFPITLAGRDVAAQAQTGTGKTLAFLASVFNY 70 Query 64 VYETLKDQ 71 + D+ Sbjct 71 LLTNAADE 78 >sp|Q9NXZ2|DDX43_HUMAN Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens OX=9606 GN=DDX43 PE=1 SV=2 Length=648 Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 105/353 (30%), Positives = 160/353 (45%), Gaps = 80/353 (23%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P L++ P+RELA Q ++ LR + + GG +Q+ L+ GVDI++ Sbjct 315 NRPGMLVLTPTRELALQVEGECCKY----SYKGLRSVCVYGGGNRDEQIEELKKGVDIII 370 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL+DL + +NL + +LVLDEAD +L G+ PQ+ ++++ Sbjct 371 ATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFE----------PQI------MKIL 414 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 DV+ + +M TW P +VH RL +S++ Sbjct 415 --------LDVRPDRQTVMTSATW---------PHSVH---------------RLAQSYL 442 Query 465 R--------TDDVHAKDNTRPG---ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 + T D+ A + + E WS L+ + D+ I+F Sbjct 443 KEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSST--------DKVIVFV 494 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 K D+L I S LHGDR+ +R++ LE FK G VR LI TD Sbjct 495 SRKAVADHLSSDLIL---------GNISVESLHGDREQRDREKALENFKTGKVRILIATD 545 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +A+RG+D+H V +V N P + YVHRIGR GRA R G++I+ + +V Sbjct 546 LASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRV 598 Score = 42.4 bits (98), Expect = 0.018, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 43/64 (67%), Gaps = 2/64 (3%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP-VIQIVYE-TL 68 PE+ + +++ + PT IQ+++ P++L G D++ A+TG+GKT + +P I +V + +L Sbjct 251 PEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSL 310 Query 69 KDQQ 72 K Q+ Sbjct 311 KGQR 314 >sp|Q6CLR3|DED1_KLULA ATP-dependent RNA helicase DED1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DED1 PE=3 SV=1 Length=627 Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 98/346 (28%), Positives = 161/346 (47%), Gaps = 55/346 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q + + KK+ ++ +++ GG + +Q+ + G +++V T Sbjct 243 PTAVILAPTRELATQIYD---EAKKFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVAT 299 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ ++L+ V++LVLDEAD +L G+ I R+ + D + Q ++ Sbjct 300 PGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEGSDMPSVDNR--QTLMF 357 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP+ + D + D V V V ++ + +++ Sbjct 358 SAT---------------FPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKI------- 395 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 ++ +D K + + + +IF TK D+L + Sbjct 396 --LYVED-----------------FDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL 436 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I +G F +HGDR ER++ L FK G L+ T VAARG+DI V + Sbjct 437 IMEG---------FKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTH 487 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 VIN LP++ +YVHRIGR GRA G+A + + V + S Sbjct 488 VINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVS 533 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIK 82 PT +Q S+P++ G D++ A+TGSGKTG F PV+ + + G + IK Sbjct 182 PTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIK 239 >sp|B5BIS9|RHLB_SALPK ATP-dependent RNA helicase RhlB OS=Salmonella paratyphi A (strain AKU_12601) OX=554290 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (346), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRVPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q91372|DDX4_XENLA Probable ATP-dependent RNA helicase DDX4 OS=Xenopus laevis OX=8355 GN=ddx4 PE=2 SV=1 Length=700 Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 105/358 (29%), Positives = 172/358 (48%), Gaps = 63/358 (18%) Query 274 NAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 N +T +++L P+A+I+ P+REL Q + ++F +R +++ GG+ Sbjct 338 NEGITASQYLQLQEPEAIIIAPTRELINQIYLDARKFSY---GTCVRPVVVYGGIQPVHA 394 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 + +E G +I+ TPGRL D+VS K+ LS++R+LVLDEAD +L G++ I ++ + P Sbjct 395 MRDVEKGCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADRMLDMGFAPEIEKLMTK-P 453 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIM---HFPTWVDLKGEDSVPDTVHHVV-VPV 448 + + KR Q ++ SAT + ++++L+ + H V L G + D V+ + Sbjct 454 GMPTKEKR-QTLMFSAT-YPEEIRRLASNYLKSEHLFVVVGLVG-GACSDVAQTVLEMRE 510 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 N K ++L E L K + ++ Sbjct 511 NGKMEKLLEIL------------------------------------------KSSEKER 528 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 +IF TK D + Y Q+ +FS +HGDR+ ++R+ L F+ G Sbjct 529 TMIFVNTKKKADFIAGYLCQE---------KFSSTSIHGDREQYQRESALWDFRTGKCTV 579 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 ++CT VAARG+DI V +VIN +P E YVHRIGR GR G A S + + V Sbjct 580 IVCTAVAARGLDIENVQHVINYDVPKEVDEYVHRIGRTGRCGNTGKATSFFNVQDDHV 637 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/64 (33%), Positives = 37/64 (58%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + V ++ T +Q SIP+I+ G D++ A+TGSGKT AF +P+ Sbjct 273 ILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPI 332 Query 61 IQIV 64 + + Sbjct 333 LSYM 336 >sp|Q40467|IF414_TOBAC Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 137 bits (346), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 103/359 (29%), Positives = 168/359 (47%), Gaps = 65/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L++GV +VVGTP Sbjct 110 QALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILQSGVHVVVGTP 166 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 167 GRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 220 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M P + +K +D + + V V+ Sbjct 221 ATMPP-EALEITRKFMSKPVRILVKRDDVTLEGIKQFYVNVD------------------ 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 262 --------------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 295 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 296 -----TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 350 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + + YN ++E Sbjct 351 VINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDI-----QKFYNVVIEE 404 Score = 33.9 bits (76), Expect = 6.1, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 >sp|C8V8H4|DED1_EMENI ATP-dependent RNA helicase ded1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ded1 PE=3 SV=1 Length=668 Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/340 (29%), Positives = 152/340 (45%), Gaps = 70/340 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + ++F +R ++ GG QL +E G D++V T Sbjct 272 PTSLILAPTRELVSQIFDEARKFAY---RSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 328 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++L+LDEAD +L G+ I R+ +P V Q + Sbjct 329 PGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVND----RQTL 384 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL----- 459 + SAT FP + + D + D V V V ++ + +++ Sbjct 385 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVED 429 Query 460 -GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K + D +H T +IF TK Sbjct 430 HDKRSVLLDILHTHGTT-------------------------------GLTLIFVETKRM 458 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L ++ I Q +F +HGDR ER++ LE F+ G L+ T VAARG Sbjct 459 ADALSEFLINQ---------RFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARG 509 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +DI V +VIN LP + +YVHRIGR GRA G+A + Sbjct 510 LDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF 549 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 0/42 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 PT +Q SIP+++ G D++ A+TGSGKTG F P++ Y+ Sbjct 209 PTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAYQ 250 >sp|Q5VNM3|IF43A_ORYSJ Eukaryotic initiation factor 4A-III homolog A OS=Oryza sativa subsp. japonica OX=39947 GN=EIF4A3A PE=1 SV=1 Length=404 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 103/358 (29%), Positives = 165/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA QT + +I+ ++ IGG + + + LE+GV +V GTP Sbjct 101 QALILSPTRELAAQTERVMLAIGDFIN---IQVHACIGGKSIGEDIRKLEHGVHVVSGTP 157 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ L+LDEAD +L +G+ D I ++ +P LQV + S Sbjct 158 GRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLP------PELQVCLIS 211 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V Sbjct 212 ATL-PHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------------- 253 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W K + + QA+IFC TK D L + Sbjct 254 ---------------EEW-------KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERM- 290 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + + F+ +HGD ER + F+ G R LI TDV ARG+D+ V V Sbjct 291 --------RSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLV 342 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V E ++ + + Y+T++ E Sbjct 343 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDI-----EQYYSTQIDE 395 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 43/72 (60%), Gaps = 0/72 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F +MG+ ++ + + + P+ IQ ++ I+ G DV+ A++G+GKT S+ V Sbjct 30 ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSV 89 Query 61 IQIVYETLKDQQ 72 QIV +++ Q Sbjct 90 CQIVDTAVREVQ 101 >sp|A9MJ29|RHLB_SALAR ATP-dependent RNA helicase RhlB OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) OX=41514 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (346), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQVTG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|P0A2P0|RHLB_SALTY ATP-dependent RNA helicase RhlB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rhlB PE=3 SV=2 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|P0A2P1|RHLB_SALTI ATP-dependent RNA helicase RhlB OS=Salmonella typhi OX=90370 GN=rhlB PE=3 SV=2 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B4TNT3|RHLB_SALSV ATP-dependent RNA helicase RhlB OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|C0Q2V9|RHLB_SALPC ATP-dependent RNA helicase RhlB OS=Salmonella paratyphi C (strain RKS4594) OX=476213 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|A9MXF3|RHLB_SALPB ATP-dependent RNA helicase RhlB OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) OX=1016998 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B4SZ26|RHLB_SALNS ATP-dependent RNA helicase RhlB OS=Salmonella newport (strain SL254) OX=423368 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B4TB13|RHLB_SALHS ATP-dependent RNA helicase RhlB OS=Salmonella heidelberg (strain SL476) OX=454169 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B5RFS3|RHLB_SALG2 ATP-dependent RNA helicase RhlB OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B5QVH2|RHLB_SALEP ATP-dependent RNA helicase RhlB OS=Salmonella enteritidis PT4 (strain P125109) OX=550537 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q57HT6|RHLB_SALCH ATP-dependent RNA helicase RhlB OS=Salmonella choleraesuis (strain SC-B67) OX=321314 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B5EZ40|RHLB_SALA4 ATP-dependent RNA helicase RhlB OS=Salmonella agona (strain SL483) OX=454166 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|A6SEH9|DED1_BOTFB ATP-dependent RNA helicase ded1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=ded1 PE=3 SV=1 Length=683 Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 155/334 (46%), Gaps = 59/334 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + + +K+ +R ++ GG QL +E G D++V T Sbjct 272 PTSLILAPTRELVSQIYD---ESRKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVAT 328 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++LVLDEAD +L G+ I R+ +P V + Q + Sbjct 329 PGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPGV----QNRQTL 384 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + D + D V V V ++ + +++ Sbjct 385 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKV----- 424 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + +D I K + + H +IF TK D+L Sbjct 425 ----EYVED-----------------IDKRSVLLDILHTHGAGLTLIFVETKRMADSLSD 463 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ LE F+ G L+ T VAARG+DI V Sbjct 464 FLINQ---------NFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNV 514 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +V+N LP + +YVHRIGR GRA G++ + Sbjct 515 KHVVNYDLPTDIDDYVHRIGRTGRAGNTGISTAF 548 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 0/55 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 + + +E + +PT +Q SIP+++GG D++ A+TGSGKTG F P++ ++T Sbjct 197 LIKNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQAFQT 251 >sp|Q088J2|RHLB_SHEFN ATP-dependent RNA helicase RhlB OS=Shewanella frigidimarina (strain NCIMB 400) OX=318167 GN=rhlB PE=3 SV=1 Length=434 Score = 137 bits (346), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 105/336 (31%), Positives = 168/336 (50%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I+ P+RELA Q + K + L+ ++ GG + Q +VL+ GVDI++GT Sbjct 85 PRAIIMAPTRELAIQIAKDAKLLAAHTG---LKVGIVYGGESYETQRAVLDKGVDILIGT 141 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D V G ++LS ++ +VLDEAD + G+ I + ++P D K ++ Sbjct 142 TGRIIDYVRQGVISLSHIQAVVLDEADRMFDLGFIKDIRFLFRRMP----DAKSRLNMLF 197 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S V++L+ M+ P V+++ P+ + + E + Sbjct 198 SATL-SMKVQELAYDHMNDPEKVEIE--------------PLEKTSKNIKEEIF------ 236 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 P M + +++L + I+E D+AI+F TK C+ L Y Sbjct 237 --------------YPSM-EDKMRLL-----LSLIEEDWPDKAIVFSNTKHSCEKLWSYL 276 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + GH+ L GD +R + LE+F G++ L+ TDVAARG+ I V + Sbjct 277 -------EGDGHRVGL--LTGDVPQKKRIRILEQFTSGEIDVLVATDVAARGLHISDVSH 327 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LPD+ ++YVHRIGR GRA + G++IS E Sbjct 328 VYNYDLPDDCEDYVHRIGRTGRAGQKGISISFACEE 363 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 34/55 (62%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F++ + PEI A+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFPLKPEILAALNENGFEFCTPIQALSLPILLNAKDIAGQAQTGTGKTMAFLV 65 >sp|Q6FS54|DBP3_CANGA ATP-dependent RNA helicase DBP3 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP3 PE=3 SV=1 Length=540 Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 107/344 (31%), Positives = 163/344 (47%), Gaps = 57/344 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P K L++ P+RELA Q +N+ + + + ++ GGV DQ + ++V Sbjct 197 PKGIKVLVISPTRELASQIYDNLVLLTQKVG---IDCCVVYGGVPKDDQRRQIAKS-NVV 252 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGRL DL+ G ++LS V ++VLDEAD +L +G+ + I R+ Q + K Q Sbjct 253 VATPGRLLDLIEEGSVDLSPVDYMVLDEADRMLEKGFEEDIKRIIGQ-----TKSKDRQT 307 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLGK 461 ++ +AT +V++L+ M P V + D S + +V V+P++ ER Sbjct 308 LMFTATWPK-EVRELASTFMKEPVKVSIGNRDELSANKRITQIVEVVDPRSK---ER--- 360 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + D+ K + P N D+ +IF K + Sbjct 361 ---KLLDLLKKYQSGPKKN--------------------------DKVLIFALYKKEASR 391 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 +E+ G + +HGD +R Q L FK G L+ TDVAARG+DI Sbjct 392 VERNLNYNG---------YKVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDI 442 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V VIN+T P ++YVHRIGR GRA + G A +L TE+EK Sbjct 443 PNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLF-TEQEK 485 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+++ + E+ + + + PT IQA S P +L G DV+ AETGSGKT AF +P Sbjct 129 LLAFNQISLDKEVQNEIAK--FPKPTPIQAVSWPYLLSGKDVIGVAETGSGKTFAFGVPA 186 Query 61 I 61 I Sbjct 187 I 187 >sp|Q62095|DDX3Y_MOUSE ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2 Length=658 Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 156/333 (47%), Gaps = 56/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +L++ P+RELA Q ++F ++R ++ GG Q+ LE G ++V T Sbjct 266 PISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADTVQQIRDLERGCHLLVAT 322 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ GK+ L ++LVLDEAD +L G+ I R+ Q + G R ++ Sbjct 323 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ-DTMPPKGVR-HTMMF 380 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + D + + + V V ++ + +++ Sbjct 381 SAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------- 418 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQY 525 +W E + K + + + D ++F TK D+LE + Sbjct 419 -----------------VWVEELD--KRSFLLDLLNATGKDSLTLVFVETKKGADSLENF 459 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 Q+ +++C +HGDR +R++ L +F+ G L+ T VAARG+DI V Sbjct 460 LFQE---------RYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVK 510 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + + YVHRIGR GR +GLA S Sbjct 511 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 543 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/81 (35%), Positives = 46/81 (57%), Gaps = 6/81 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + I +E + PT +Q +IP+I D++ A+TGSGKT AF +P++ Sbjct 181 FSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQ 240 Query 64 VY-----ETLKDQQE-GKKGK 78 +Y E LK +E G+ G+ Sbjct 241 IYTDGPGEALKAMKENGRYGR 261 >sp|B1JQ11|RHLB_YERPY ATP-dependent RNA helicase RhlB OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) OX=502800 GN=rhlB PE=3 SV=1 Length=428 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 164/342 (48%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHSDAESLSQVTG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P V KRL ++ Sbjct 140 GTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSV---DKRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ +V++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEV---EPLQKTGHRIKEELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+E D+ IIF TK C+ Sbjct 251 ----------------------------------------IEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + G GH+ L GD +R + LE F KGD+ L+ TDVAARG+ Sbjct 271 EI-------WGHLAADGHRVGL--LTGDVAQKKRLRILEDFTKGDLDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|Q66G19|RHLB_YERPS ATP-dependent RNA helicase RhlB OS=Yersinia pseudotuberculosis serotype I (strain IP32953) OX=273123 GN=rhlB PE=3 SV=1 Length=428 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 164/342 (48%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHSDAESLSQVTG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P V KRL ++ Sbjct 140 GTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSV---DKRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ +V++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEV---EPLQKTGHRIKEELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+E D+ IIF TK C+ Sbjct 251 ----------------------------------------IEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + G GH+ L GD +R + LE F KGD+ L+ TDVAARG+ Sbjct 271 EI-------WGHLAADGHRVGL--LTGDVAQKKRLRILEDFTKGDLDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|A4TRC8|RHLB_YERPP ATP-dependent RNA helicase RhlB OS=Yersinia pestis (strain Pestoides F) OX=386656 GN=rhlB PE=3 SV=1 Length=428 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 164/342 (48%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHSDAESLSQVTG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P V KRL ++ Sbjct 140 GTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSV---DKRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ +V++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEV---EPLQKTGHRIKEELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+E D+ IIF TK C+ Sbjct 251 ----------------------------------------IEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + G GH+ L GD +R + LE F KGD+ L+ TDVAARG+ Sbjct 271 EI-------WGHLAADGHRVGL--LTGDVAQKKRLRILEDFTKGDLDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|Q1CNK3|RHLB_YERPN ATP-dependent RNA helicase RhlB OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=rhlB PE=3 SV=1 Length=428 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 164/342 (48%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHSDAESLSQVTG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P V KRL ++ Sbjct 140 GTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSV---DKRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ +V++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEV---EPLQKTGHRIKEELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+E D+ IIF TK C+ Sbjct 251 ----------------------------------------IEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + G GH+ L GD +R + LE F KGD+ L+ TDVAARG+ Sbjct 271 EI-------WGHLAADGHRVGL--LTGDVAQKKRLRILEDFTKGDLDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|Q8ZAD8|RHLB_YERPE ATP-dependent RNA helicase RhlB OS=Yersinia pestis OX=632 GN=rhlB PE=3 SV=1 Length=428 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 164/342 (48%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHSDAESLSQVTG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P V KRL ++ Sbjct 140 GTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSV---DKRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ +V++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEV---EPLQKTGHRIKEELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+E D+ IIF TK C+ Sbjct 251 ----------------------------------------IEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + G GH+ L GD +R + LE F KGD+ L+ TDVAARG+ Sbjct 271 EI-------WGHLAADGHRVGL--LTGDVAQKKRLRILEDFTKGDLDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|B2K046|RHLB_YERPB ATP-dependent RNA helicase RhlB OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) OX=502801 GN=rhlB PE=3 SV=1 Length=428 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 164/342 (48%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHSDAESLSQVTG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P V KRL ++ Sbjct 140 GTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSV---DKRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ +V++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEV---EPLQKTGHRIKEELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+E D+ IIF TK C+ Sbjct 251 ----------------------------------------IEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + G GH+ L GD +R + LE F KGD+ L+ TDVAARG+ Sbjct 271 EI-------WGHLAADGHRVGL--LTGDVAQKKRLRILEDFTKGDLDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|Q1CBQ4|RHLB_YERPA ATP-dependent RNA helicase RhlB OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=rhlB PE=3 SV=1 Length=428 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 164/342 (48%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHSDAESLSQVTG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P V KRL ++ Sbjct 140 GTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSV---DKRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ +V++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEV---EPLQKTGHRIKEELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+E D+ IIF TK C+ Sbjct 251 ----------------------------------------IEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + G GH+ L GD +R + LE F KGD+ L+ TDVAARG+ Sbjct 271 EI-------WGHLAADGHRVGL--LTGDVAQKKRLRILEDFTKGDLDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|A7FD47|RHLB_YERP3 ATP-dependent RNA helicase RhlB OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) OX=349747 GN=rhlB PE=3 SV=1 Length=428 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 164/342 (48%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHSDAESLSQVTG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P V KRL ++ Sbjct 140 GTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSV---DKRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ +V++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEV---EPLQKTGHRIKEELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+E D+ IIF TK C+ Sbjct 251 ----------------------------------------IEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + G GH+ L GD +R + LE F KGD+ L+ TDVAARG+ Sbjct 271 EI-------WGHLAADGHRVGL--LTGDVAQKKRLRILEDFTKGDLDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|P0A4D8|CSHA_STRR6 DEAD-box ATP-dependent RNA helicase CshA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=cshA PE=3 SV=1 Length=524 Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 107/363 (29%), Positives = 175/363 (48%), Gaps = 66/363 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q+ + +F + K+R + GG + Q+ L++G IVVGTP Sbjct 71 QALVIAPTRELAVQSQEELFRFGRS-KGVKVRS--VYGGSSIEKQIKALKSGAHIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL+ L L + L+LDEAD +L+ G+ + I + +++P+ Q ++ S Sbjct 128 GRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPE------NRQTLLFS 181 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSHIR 465 AT+ +K++ + M P V + ++ + V +++ V K D + R Sbjct 182 ATMPD-AIKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMT--------R 232 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DV PE+ AI+F RTK D L + Sbjct 233 LMDVA----------QPEL------------------------AIVFGRTKRRVDELTRG 258 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G F +HGD ++R + L FK G++ L+ TDVAARG+DI GV Sbjct 259 LKIRG---------FRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVT 309 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE---KVWYHVCSSRGKGCYNTR 642 +V N +P + ++YVHRIGR GRA + G +I+ VA + ++ ++ R KG Sbjct 310 HVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIENLTKKRMKGLKPAS 369 Query 643 LKE 645 ++E Sbjct 370 VEE 372 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 40/61 (66%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + ++ +E+ ++ + IQ ++IPL L G DV+ A+TG+GKT AF +P ++ Sbjct 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query 64 V 64 + Sbjct 63 I 63 >sp|P0A4D7|CSHA_STRPN DEAD-box ATP-dependent RNA helicase CshA OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=cshA PE=3 SV=1 Length=524 Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 107/363 (29%), Positives = 175/363 (48%), Gaps = 66/363 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q+ + +F + K+R + GG + Q+ L++G IVVGTP Sbjct 71 QALVIAPTRELAVQSQEELFRFGRS-KGVKVRS--VYGGSSIEKQIKALKSGAHIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL+ L L + L+LDEAD +L+ G+ + I + +++P+ Q ++ S Sbjct 128 GRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAIISRVPE------NRQTLLFS 181 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSHIR 465 AT+ +K++ + M P V + ++ + V +++ V K D + R Sbjct 182 ATMPD-AIKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRVKEQEKFDTMT--------R 232 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DV PE+ AI+F RTK D L + Sbjct 233 LMDVA----------QPEL------------------------AIVFGRTKRRVDELTRG 258 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G F +HGD ++R + L FK G++ L+ TDVAARG+DI GV Sbjct 259 LKIRG---------FRAEGIHGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVT 309 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE---KVWYHVCSSRGKGCYNTR 642 +V N +P + ++YVHRIGR GRA + G +I+ VA + ++ ++ R KG Sbjct 310 HVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIENLTKKRMKGLKPAS 369 Query 643 LKE 645 ++E Sbjct 370 VEE 372 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 40/61 (66%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + ++ +E+ ++ + IQ ++IPL L G DV+ A+TG+GKT AF +P ++ Sbjct 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query 64 V 64 + Sbjct 63 I 63 >sp|B5FN74|RHLB_SALDC ATP-dependent RNA helicase RhlB OS=Salmonella dublin (strain CT_02021853) OX=439851 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (345), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 109/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPA---AQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEDI- 272 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G GH+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 273 ------WGHLAADGHRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKRFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|P21693|DBPA_ECOLI ATP-dependent RNA helicase DbpA OS=Escherichia coli (strain K12) OX=83333 GN=dbpA PE=1 SV=2 Length=457 Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/338 (29%), Positives = 157/338 (46%), Gaps = 59/338 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q +++ +++ N K+ L + GG Q L++ I+V TP Sbjct 73 QALVLCPTRELADQVAGELRRLARFLPNTKI--LTLCGGQPFGMQRDSLQHAPHIIVATP 130 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL D + G ++L + LV+DEAD +L G+SD I+ + P Q ++ S Sbjct 131 GRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAP------ASRQTLLFS 184 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT + +S ++ P +++ D++P P + +E K I Sbjct 185 ATWPEA-IAAISGRVQRDPLAIEIDSTDALP-----------PIEQQFYETSSKGKI--- 229 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 +L+ R + H+ ++FC TK DC + Sbjct 230 ----------------------PLLQ-----RLLSLHQPSSCVVFCNTKKDCQAVCDALN 262 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G S + LHGD + +R Q L RF G R L+ TDVAARG+DI + V Sbjct 263 EVGQ---------SALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELV 313 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +N L + + +VHRIGR RA GLAIS A E+ + Sbjct 314 VNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQ 351 Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/73 (40%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Query 1 MAAFSEMGVMPEIAQA-VEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 M AFS + V+P + E+ +L T +QA ++P IL G DV + A+TGSGKT AF + Sbjct 1 MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG 60 Query 60 VIQIVYETLKDQQ 72 ++Q + +L Q Sbjct 61 LLQQIDASLFQTQ 73 >sp|P41378|IF4A_WHEAT Eukaryotic initiation factor 4A OS=Triticum aestivum OX=4565 PE=2 SV=1 Length=414 Score = 137 bits (344), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 105/359 (29%), Positives = 166/359 (46%), Gaps = 65/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L +GV +VVGTP Sbjct 111 QALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILASGVHVVVGTP 167 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D+V L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 168 GRVFDIVRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLP------GKIQVGVFS 221 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K ++ + + V V Sbjct 222 ATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEK----------------- 263 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W + L Y AI Q++IF T+ D L Sbjct 264 ---------------EEWK--LDTLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 296 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK +G + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 297 -----TDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 351 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP + +NY HRIGR GR R G+AI+ V E E++ + + + YN ++E Sbjct 352 VINYDLPTQPENYQHRIGRSGRFGRKGVAINFVTREDERMLFDI-----QKFYNVVIEE 405 Score = 34.3 bits (77), Expect = 4.0, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 31/60 (52%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101 >sp|A8ACT3|RHLB_CITK8 ATP-dependent RNA helicase RhlB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=rhlB PE=3 SV=1 Length=421 Score = 137 bits (344), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQ---TTGLKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AI+F TK C+++ Sbjct 251 -------------------------------------IEEEWPDRAIVFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q2H720|DBP2_CHAGB ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP2 PE=3 SV=1 Length=562 Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/341 (29%), Positives = 168/341 (49%), Gaps = 53/341 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q I +F K + ++R + GGV Q L GV++ + Sbjct 208 DGPIVLVLAPTRELAVQIQQEITKFGK---SSRIRNTCVYGGVPKGPQTRDLSRGVEVCI 264 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ +G+ NL +V +LVLDEAD +L G+ I ++ I Q+ D Q Sbjct 265 ATPGRLIDMLESGRTNLRRVTYLVLDEADRMLDMGFEPQIRKI---IGQIRPD---RQTC 318 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V+ L+ + D + + + + N + ++ E + +S Sbjct 319 MWSATWPK-EVRALASDFL----------TDFIQVNIGSMDLAANHRITQVVEVVNESEK 367 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R K++K + KE + ++ +IF TK D + + Sbjct 368 RD-----------------------KMIKHLEKIMEDKESQ-NKILIFTGTKRVADEITR 403 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD++ +ER L++FK G ++ TDVA+RGID+ + Sbjct 404 -FLRQDGWP--------ALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNI 454 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +V+N P+ ++Y+HRIGR GRA G AI+ T+ K Sbjct 455 THVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSK 495 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P I Sbjct 138 FDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAI 195 >sp|P24346|DDX3_XENLA Putative ATP-dependent RNA helicase an3 OS=Xenopus laevis OX=8355 GN=an3 PE=2 SV=1 Length=697 Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 157/333 (47%), Gaps = 56/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +L++ P+RELA Q ++ +K+ ++R ++ GG Q+ LE G ++V T Sbjct 308 PLSLVLAPTRELAVQIY---EEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVAT 364 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ GK+ L ++LVLDEAD +L G+ I R+ Q + G R Q ++ Sbjct 365 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ-DTMPPKGVR-QTMMF 422 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + D + + + V V ++ + +++ Sbjct 423 SAT---------------FPKEIQILARDFLDEYIFLAVGRVGSTSENITQKV------- 460 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQY 525 +W E + K + + + D ++F TK D LE + Sbjct 461 -----------------VWVEEMD--KRSFLLDLLNATGKDSLTLVFVETKKGADALEDF 501 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V Sbjct 502 LYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVK 552 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + + YVHRIGR GR +GLA S Sbjct 553 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 585 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/84 (30%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++ + I ++ + PT +Q +IP+I+ D++ A+TGSGKT AF +P+ Sbjct 220 IESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPI 279 Query 61 IQIVY-----ETLKDQQE-GKKGK 78 + +Y + +K QE G+ G+ Sbjct 280 LSQIYADGPGDAMKHLQENGRYGR 303 >sp|Q8DDN6|RHLB_VIBVU ATP-dependent RNA helicase RhlB OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=rhlB PE=3 SV=1 Length=435 Score = 137 bits (344), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 110/337 (33%), Positives = 166/337 (49%), Gaps = 59/337 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+A+I+ P+RELA Q N+ + I + ++ L GG + QL+ L+ GVD++ Sbjct 82 PTQPRAIIMAPTRELAIQIYNDAEPL---IASTGIKAALAYGGESYDKQLTKLQGGVDVL 138 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +GT GR+ D NL+ ++ +VLDEAD + G+ I + ++P + +RL + Sbjct 139 IGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMP---APQERLNM 195 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT-DRLWERLGKS 462 + SATL S+ V++L+ + MH P HVVV KT R+ E L Sbjct 196 LF-SATL-SYRVQELAFEHMHNP---------------EHVVVEPEQKTGHRIQEEL--F 236 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + +D A T I+E D+AIIF TK C+++ Sbjct 237 YPSNEDKMALLQT------------------------LIEEEWPDRAIIFANTKYKCESI 272 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + GH+ L GD +R++ LE+F +G V L+ TDVAARG+ I Sbjct 273 WAHLA-------ADGHRVGL--LTGDVPQKKREKILEQFTQGSVDLLVATDVAARGLHIP 323 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V +V N LPD+ ++YVHRIGR GRA G +IS Sbjct 324 QVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFA 360 Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 37/53 (70%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++G+ P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAF 63 >sp|Q7MGP7|RHLB_VIBVY ATP-dependent RNA helicase RhlB OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=rhlB PE=3 SV=1 Length=435 Score = 137 bits (344), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 110/337 (33%), Positives = 166/337 (49%), Gaps = 59/337 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+A+I+ P+RELA Q N+ + I + ++ L GG + QL+ L+ GVD++ Sbjct 82 PTQPRAIIMAPTRELAIQIYNDAEPL---IASTGIKAALAYGGESYDKQLAKLQGGVDVL 138 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +GT GR+ D NL+ ++ +VLDEAD + G+ I + ++P + +RL + Sbjct 139 IGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDIRFLFRRMP---APQERLNM 195 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT-DRLWERLGKS 462 + SATL S+ V++L+ + MH P HVVV KT R+ E L Sbjct 196 LF-SATL-SYRVQELAFEHMHNP---------------EHVVVEPEQKTGHRIQEEL--F 236 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + +D A T I+E D+AIIF TK C+++ Sbjct 237 YPSNEDKMALLQT------------------------LIEEEWPDRAIIFANTKYKCESI 272 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + GH+ L GD +R++ LE+F +G V L+ TDVAARG+ I Sbjct 273 WAHLA-------ADGHRVGL--LTGDVPQKKREKILEQFTQGSVDLLVATDVAARGLHIP 323 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V +V N LPD+ ++YVHRIGR GRA G +IS Sbjct 324 QVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFA 360 Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 37/53 (70%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++G+ P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAF 63 >sp|Q9ZRZ8|RH28_ARATH DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana OX=3702 GN=RH28 PE=2 SV=1 Length=789 Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 115/387 (30%), Positives = 178/387 (46%), Gaps = 61/387 (16%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A + LI+ P+RELA Q + I+ ++ D ++ LI+GG++ R+Q VL + DIVV Sbjct 238 ATRVLILTPTRELAVQIHSMIQNLAQFTD---IKCGLIVGGLSVREQEVVLRSMPDIVVA 294 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR+ D L ++ ++L + L+LDEAD LL G++ I + P KR Q + Sbjct 295 TPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCP------KRRQTM 348 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ + +VK+L + ++ P + P + VV + Sbjct 349 LFSATM-TEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIR--------------- 392 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 TR + S + K + IIF TK L+ Sbjct 393 ---------RTREANQEAVLLSLCTRTFKS-------------KVIIFSGTKQAAHRLKI 430 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F G LHG+ +R +LE F+K +V FLI TDVAARG+DI GV Sbjct 431 LFGLAG---------LKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGV 481 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 VIN P E +YVHR+GR RA R G A++ V T+ ++ V + + +R+ Sbjct 482 QTVINYACPREIDSYVHRVGRTARAGREGYAVTFV-TDSDRSLLKVIAKKVGSKLKSRVI 540 Query 645 EDGGCTIWYNEMQLLSEIEEHLNCTIS 671 + W Q++ E+E+ + IS Sbjct 541 PEQSIVKWS---QIIDEMEDQYSAVIS 564 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E+ + + +A E + + PT IQA IPL L G D+ +A TGSGKT AF++P ++ Sbjct 169 FMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227 >sp|P16381|DDX3L_MOUSE Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1 Length=660 Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 154/333 (46%), Gaps = 56/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +L++ P+RELA Q ++F ++R ++ GG Q+ LE G ++V T Sbjct 266 PISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVAT 322 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ GK+ L ++LVLDEAD +L G+ I R+ Q + G R ++ Sbjct 323 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ-DTMPPKGVR-HTMMF 380 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + D + + + V V ++ + +++ Sbjct 381 SAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------- 418 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI-IFCRTKIDCDNLEQY 525 +W E K + + + D I +F TK D+LE + Sbjct 419 -----------------VWVEEAD--KRSFLLDLLNATGKDSLILVFVETKKGADSLEDF 459 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V Sbjct 460 LYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVK 510 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + + YVHRIGR GR +GLA S Sbjct 511 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 543 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS++ + I +E + PT +Q +IP+I D++ A+TGSGKT AF +P+ Sbjct 178 IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPI 237 Query 61 IQIVY-----ETLKDQQE-GKKGK 78 + +Y E L+ +E GK G+ Sbjct 238 LSQIYTDGPGEALRAMKENGKYGR 261 >sp|Q887N8|RHLB_PSESM ATP-dependent RNA helicase RhlB OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=rhlB PE=3 SV=1 Length=397 Score = 135 bits (341), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 105/343 (31%), Positives = 155/343 (45%), Gaps = 78/343 (23%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVG 345 P+ALI+ P+REL Q + KY + L + +GG+ QL LE DI+V Sbjct 84 PRALIIAPTRELVVQIAKDAADLTKYTN---LNVMTFVGGMDFDKQLKQLEARHCDILVA 140 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D G+++L V +VLDEAD +L G FI ++ I Q G+R Q ++ Sbjct 141 TPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMG---FIPQVRQIIRQTPHKGER-QTLL 196 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV----------NPKTDRL 455 SAT + DV L+++ P+ V+++ + D V + V N TD Sbjct 197 FSATF-TEDVMNLAKQWTTDPSIVEIESLNVASDNVEQHIYAVAGADKYKLLYNLVTDNG 255 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 WER+ ++F Sbjct 256 WERV--------------------------------------------------MVFANR 265 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K + +E+ ++ G + L GD H+R + LE F++G +R L+ TDVA Sbjct 266 KDEVRRIEERLVRDG---------VNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVA 316 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 RGI I G+ +VIN TLP+ +YVHRIGR GRA G++IS Sbjct 317 GRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISF 359 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + PE+ A++++ + T IQA + L G D + A+TG+GKT AF I +I+ Sbjct 10 FHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQ 69 Query 64 VYET 67 + +T Sbjct 70 LTQT 73 >sp|O25029|RHPA_HELPY DEAD-box ATP-dependent RNA helicase RhpA OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=rhpA PE=1 SV=1 Length=492 Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 93/333 (28%), Positives = 163/333 (49%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + I + K+ + + + + GG + + Q ++ +++ TP Sbjct 89 EALVITPTRELAMQISDEIFKLGKHT---RTKTVCVYGGQSVKKQCEFIKKNPQVMIATP 145 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL D + +++ + +VLDE+D +L G+ D I + + +P Q+++ S Sbjct 146 GRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPS------EAQILLFS 199 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +K+L++KI+ P + + P + + + T R + + H R Sbjct 200 ATMPE-PIKRLADKILENPIKIHI-----APSNITNTDI-----TQRFY--VINEHER-- 244 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 +EAI +R + ++I+F RTK + D L Q+ Sbjct 245 ------------------AEAI--------MRLLDTQAPKKSIVFTRTKKEADELHQFLA 278 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + + LHGD +R+ ++ FKK D L+ TDVA+RG+DI GV +V Sbjct 279 SKN---------YKSTALHGDMDQRDRRSSIMAFKKNDADVLVATDVASRGLDISGVSHV 329 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 N LP ++Y+HRIGR GRA + G+AI+LV Sbjct 330 FNYHLPLNTESYIHRIGRTGRAGKKGMAITLVT 362 Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 42/59 (71%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F+++G+ + ++V E + P+ IQ ++IP +L G DV+ A+TG+GKT AF++P+I Sbjct 21 SFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPII 79 >sp|B7NTG2|RHLB_ECO7I ATP-dependent RNA helicase RhlB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) OX=585057 GN=rhlB PE=3 SV=1 Length=421 Score = 136 bits (342), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|A7TEF4|FAL1_VANPO ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=FAL1 PE=3 SV=1 Length=399 Score = 135 bits (341), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/337 (30%), Positives = 155/337 (46%), Gaps = 61/337 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGT 346 +AL++ P+RELA Q + Y++ ++ + GG +D L+ ++ NG +V GT Sbjct 93 QALVLSPTRELASQINQVVSNLGDYMN---VQSYAMTGGKTMKDDLNRMQKNGCQVVSGT 149 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLL--SQGYSDFINRMHNQIPQVTSDGKRLQVI 404 PGR+ D+ LN V+ L+LDEAD LL S G+ I + ++P QV+ Sbjct 150 PGRVLDMFKRHLLNTRNVQMLILDEADELLGESLGFKQQIYDIFTKLPAAC------QVV 203 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 V SAT+ S D+ ++++K M P + +K ++ + + V V Sbjct 204 VVSATM-SKDILEVTKKFMSDPVKILVKRDEISLEGIKQYYVNVEK-------------- 248 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 E W K + + Q +IFC TK D L Sbjct 249 ------------------EDW-------KFDTLCDLYDSLTITQCVIFCNTKKKVDWLSA 283 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Q F+ V +HGD K +R + + F+ G R LI TDV ARGID+ V Sbjct 284 KLTQSN---------FAVVSMHGDMKQEDRNKVMSDFRSGHSRVLISTDVWARGIDVQQV 334 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 VIN +P+ +NY+HRIGR GR R G+AI+ + + Sbjct 335 SLVINYDIPEIMENYIHRIGRSGRFGRKGVAINFITS 371 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + ++ + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++Q Sbjct 24 TFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQ 83 Query 63 IVYETLKDQQ 72 + KD Q Sbjct 84 AIDLKRKDLQ 93 >sp|Q65N62|CSHA_BACLD DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=cshA PE=3 SV=1 Length=487 Score = 137 bits (345), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 105/349 (30%), Positives = 169/349 (48%), Gaps = 66/349 (19%) Query 281 KFLPNAP--KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K P +P +A+++ P+RELA Q ++ K + + R L I GG Q+ L+ Sbjct 64 KINPESPNIQAIVIAPTRELAIQVS---EELYKIGQDKRARVLPIYGGQDIGRQIRALKK 120 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 I+VGTPGRL D ++ + L V +VLDEAD +L+ G+ + I + + +P Sbjct 121 NPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVP------ 174 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN--PKTDRLW 456 Q ++ SAT+ + +K+++E+ M P V +K ++ + + V+ K D L Sbjct 175 AEHQTLLFSATMPA-PIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLT 233 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 L D+ SPE+ AI+F RTK Sbjct 234 RLL--------DIQ----------SPEL------------------------AIVFGRTK 251 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 D L + +G ++ +HGD +R L +FK+G + L+ TDVAA Sbjct 252 RRVDELTEALNLRG---------YTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAA 302 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 RG+DI GV +V N +P + ++YVHRIGR GRA + G+A++ + T +EK Sbjct 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFI-TPREK 350 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 39/59 (66%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ +A++ M + T IQA++IPL L DV+ A+TG+GKT AF IP+++ Sbjct 5 FQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63 >sp|Q329V8|RHLB_SHIDS ATP-dependent RNA helicase RhlB OS=Shigella dysenteriae serotype 1 (strain Sd197) OX=300267 GN=rhlB PE=3 SV=1 Length=421 Score = 136 bits (342), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NKPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFSLHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B7LU75|RHLB_ESCF3 ATP-dependent RNA helicase RhlB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73) OX=585054 GN=rhlB PE=3 SV=1 Length=421 Score = 136 bits (342), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q12S35|RHLB_SHEDO ATP-dependent RNA helicase RhlB OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) OX=318161 GN=rhlB PE=3 SV=1 Length=432 Score = 136 bits (342), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 105/335 (31%), Positives = 162/335 (48%), Gaps = 59/335 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q VL+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDANLLAKHTG---LKVGIVYGGESYEVQREVLDKGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G ++L+ ++ +VLDEAD + G+ I + ++P +S RL ++ Sbjct 140 GTTGRIIDYVRQGVISLNSIQAVVLDEADRMFDLGFIKDIRFLFRRMPDASS---RLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S V++L+ M+ P V++ E+ + + P RL L + Sbjct 197 F-SATL-SMKVQELAYDHMNDPEKVEVTPEEKTSKNIKEEIFYPSTEDKMRLLLTLME-- 252 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 E W E +AI+F TK C+NL Sbjct 253 -------------------EDWPE--------------------KAIVFSNTKHSCENLW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + GH+ L GD +R + LE+F GD+ L+ TDVAARG+ I Sbjct 274 SWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTSGDLDVLVATDVAARGLHISD 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V +V N LPD+ ++YVHRIGR GRA G+++S Sbjct 325 VSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSF 359 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 35/55 (64%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + E+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHAEVIQALNENGFEFCTPIQALSLPVLLKAKDIAGQAQTGTGKTMAFLV 65 >sp|Q8CRP6|CSHA_STAES DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=cshA PE=3 SV=1 Length=509 Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 100/334 (30%), Positives = 163/334 (49%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F K K++ + + GG+ Q+ VL+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSK---GQKVQVVTVFGGMPIERQIKVLKRGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP ++ Q ++ S Sbjct 128 GRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIP-----AEQRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDT-VHHVVVPVNPKTDRLWERLGKSHIR 465 AT+ +++L ++ M P + + E S P ++ +V K D L Sbjct 183 ATMPKA-IQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LLSKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q +E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|P20447|DBP3_YEAST ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP3 PE=1 SV=2 Length=523 Score = 138 bits (347), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 106/342 (31%), Positives = 164/342 (48%), Gaps = 61/342 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L++ P+RELA Q +N+ D ++ + GGV +Q L+ +VV TP Sbjct 184 QVLVISPTRELASQIYDNLIVL---TDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATP 239 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL+ G ++LSQV +LVLDEAD +L +G+ + I + + +D + Q ++ + Sbjct 240 GRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRE-----TDASKRQTLMFT 294 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT--VHHVVVPVNP--KTDRLWERLGKSH 463 AT +V++L+ M+ P V + D + + +V V+P K +L E L K H Sbjct 295 ATWPK-EVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYH 353 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + P+ K ++ +IF K + +E Sbjct 354 ----------------SGPK---------------------KNEKVLIFALYKKEAARVE 376 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G ++ +HGD +R Q L FK G L+ TDVAARG+DI Sbjct 377 RNLKYNG---------YNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPN 427 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V VIN+T P ++YVHRIGR GRA + G A +L TE+EK Sbjct 428 VKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLF-TEQEK 468 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQA + P +L G DV+ AETGSGKT AF +P I Sbjct 135 PTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAI 171 >sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 103/359 (29%), Positives = 168/359 (47%), Gaps = 65/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L++GV +VVGTP Sbjct 110 QALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILQSGVHVVVGTP 166 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 167 GRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 220 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K +D + + V V+ Sbjct 221 ATMPP-EALEITRKFMNKPVRILVKRDDVTLEGIKQFYVNVD------------------ 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 262 --------------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 295 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 296 -----TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 350 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + YN ++E Sbjct 351 VINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDI-----QKFYNVVIEE 404 Score = 33.9 bits (76), Expect = 5.9, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 >sp|B1LLV3|RHLB_ECOSM ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain SMS-3-5 / SECEC) OX=439855 GN=rhlB PE=3 SV=1 Length=421 Score = 136 bits (342), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAQATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLCAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B7NF85|RHLB_ECOLU ATP-dependent RNA helicase RhlB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=rhlB PE=3 SV=1 Length=421 Score = 136 bits (342), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q1DZK8|DBP3_COCIM ATP-dependent RNA helicase DBP3 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP3 PE=3 SV=2 Length=515 Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 161/339 (47%), Gaps = 52/339 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+RELA Q + + +F +D + I GG Q + N +V+ T Sbjct 173 PCALIITPTRELAVQIYDQLLRFSSAVD---VGIACIYGGSPKDHQRREIRNA-SVVIAT 228 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D + +NLS V++LVLDEAD +L +G+ I + IP ++ Q I+ Sbjct 229 PGRLKDFQADQTINLSGVKYLVLDEADRMLDKGFEQDIQDIVKGIPST----QKRQTIMF 284 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 +AT V+ L+ P V V + +D + K + Sbjct 285 TATW-PIGVRNLAASFTKNP-----------------VTVTIGDSSDIRANKRIKQMVEV 326 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + KD S +++L+ Y H++ ++FC K + +E++ Sbjct 327 LQPYEKD------------SRLLELLR-RYQDGGKNNHRI---LVFCLYKKEAMRVERFI 370 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +G F +HGD ER ++LE FK G + L+ TDVAARG+DI V Sbjct 371 GSKG---------FKVAGIHGDMSQTERFRSLEAFKSGSISLLVATDVAARGLDIPAVKL 421 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V+NVT P ++YVHRIGR GRA GLAI+L TE++K Sbjct 422 VLNVTFPLTIEDYVHRIGRTGRAGAEGLAITLF-TERDK 459 Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 14/116 (12%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTG 84 PT IQA S PL G D++ AETGSGKT AF +P ++ V E L + + K I T Sbjct 122 PTPIQAVSWPLAFAGRDLIGVAETGSGKTLAFGLPCLRRVLE-LNNSETSCKPCALIITP 180 Query 85 ASVLNKWQMNPYDRGSAFAIGSD-GLCC---------QSREVKEWHGCRATKGLMK 130 L + YD+ F+ D G+ C Q RE++ AT G +K Sbjct 181 TREL---AVQIYDQLLRFSSAVDVGIACIYGGSPKDHQRREIRNASVVIATPGRLK 233 >sp|Q0SYX0|RHLB_SHIF8 ATP-dependent RNA helicase RhlB OS=Shigella flexneri serotype 5b (strain 8401) OX=373384 GN=rhlB PE=3 SV=1 Length=421 Score = 136 bits (342), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B5YY28|RHLB_ECO5E ATP-dependent RNA helicase RhlB OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) OX=444450 GN=rhlB PE=3 SV=1 Length=421 Score = 136 bits (342), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q7MYL2|RHLB_PHOLL ATP-dependent RNA helicase RhlB OS=Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) OX=243265 GN=rhlB PE=3 SV=1 Length=428 Score = 136 bits (342), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/342 (31%), Positives = 166/342 (49%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL +LE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIYSDAEDLAQATG---LKMGLAYGGDGYDKQLKILESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D G +NL+ V+ +VLDEAD + G+ I + ++P V +R+ ++ Sbjct 140 GTTGRLIDYTKQGHINLNAVQVVVLDEADRMYDLGFIKDIRWLFRRMPPV---NERMNLL 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ ++++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNHAEYIEV---EPLQKTGHRIREELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 ++E D+ IIF TK C+ Sbjct 251 ----------------------------------------LEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 ++ + G H+ L GD +R + LE F G++ L+ TDVAARG+ Sbjct 271 DIWAHLAADG-------HRVGL--LTGDVAQKKRLRILEEFSNGNIDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 40.8 bits (94), Expect = 0.044, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A++ + T IQA ++P + G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVIEALDNKGFSNCTPIQALTLPFTVEGRDVAGQAQTGTGKTLAF 63 >sp|P35683|IF4A1_ORYSJ Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0701100 PE=2 SV=2 Length=414 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 112/415 (27%), Positives = 186/415 (45%), Gaps = 75/415 (18%) Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ--------VTQTKFLPNAPKALI 291 + +G E+ + G V K D +++ SG + + Q + +AL+ Sbjct 57 YAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATFCSGILQQLDYAVVECQALV 114 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 + P+RELA+Q ++ Y+ ++ +GG + R+ +L +GV +VVGTPGR+ Sbjct 115 LAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILASGVHVVVGTPGRVF 171 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V SAT+ Sbjct 172 DMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLP------SKIQVGVFSATMP 225 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 + +++ K M+ P + +K ++ + + V V Sbjct 226 P-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEK--------------------- 263 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 E W + L Y AI Q++IF T+ D L Sbjct 264 -----------EEWK--LDTLCDLYETLAIT-----QSVIFVNTRRKVDWL--------- 296 Query 532 GPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 DK +G + HGD + R + F+ G R LI TD+ ARGID+ V VIN Sbjct 297 -TDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINY 355 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 LP + +NY+HRIGR GR R G+AI+ V + E++ + + + YN ++E Sbjct 356 DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI-----QRFYNVVIEE 405 Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 31/60 (52%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101 >sp|Q41741|IF4A_MAIZE Eukaryotic initiation factor 4A OS=Zea mays OX=4577 PE=2 SV=1 Length=410 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 124/488 (25%), Positives = 205/488 (42%), Gaps = 97/488 (20%) Query 166 GFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGL-------AFEI 218 G G + +KQ+D +E D Y D+ + F G L FE Sbjct 3 GLAPEGSQFDDKQYDKKMQEILTEDFFTSYDDVCES---FDSMGLQENLLRGIYAYGFEK 59 Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 P ++ + + P C G + +A G K+ + + Sbjct 60 PSAIQQRGIVPFC---------------------KGLDVIQQAQSG-TGKTATFCSGILQ 97 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L + Sbjct 98 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILAS 154 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 155 GVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLP------ 208 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++QV V SAT+ + +++ K M+ P + +K ++ + + V ++ Sbjct 209 SKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNIDK-------- 259 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 E W + L Y AI Q++IF T+ Sbjct 260 ------------------------EDWK--LDTLCDLYETLAIT-----QSVIFVNTRRK 288 Query 519 CDNLEQYFIQQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L DK + + HGD + R + F+ G R LI TD+ AR Sbjct 289 VDWL----------TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 338 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + V + Sbjct 339 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERIVFDV-----QR 393 Query 638 CYNTRLKE 645 YN ++E Sbjct 394 FYNVTVEE 401 Score = 33.9 bits (76), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 38 SFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 97 >sp|P41381|IF4A8_TOBAC Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 103/358 (29%), Positives = 166/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L GV ++VGTP Sbjct 110 QALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILAAGVHVIVGTP 166 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L +R VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 167 GRVFDMLRRQSLRPDYLRMFVLDEADEMLSRGFKDQIYDIFQMLP------TKVQVGVFS 220 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + ++ K M+ P + +K ++ + + V V+ Sbjct 221 ATMPP-EALDITRKFMNKPVRILVKRDELTLEGIKQFYVNVDK----------------- 262 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 263 ---------------EEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWLTDKM- 299 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + H S HGD + R + F+ G R LI TD+ ARGID+ V V Sbjct 300 ------RTRDHTVSAT--HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP + +NY+HRIGR GR R G+AI+ V T+ E++ + + + YN ++E Sbjct 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDI-----QKFYNVIIEE 404 Score = 33.5 bits (75), Expect = 7.5, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100 >sp|Q3YVI4|RHLB_SHISS ATP-dependent RNA helicase RhlB OS=Shigella sonnei (strain Ss046) OX=300269 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|P0A8K0|RHLB_SHIFL ATP-dependent RNA helicase RhlB OS=Shigella flexneri OX=623 GN=rhlB PE=3 SV=2 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q31UK5|RHLB_SHIBS ATP-dependent RNA helicase RhlB OS=Shigella boydii serotype 4 (strain Sb227) OX=300268 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ + +E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEVLEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B2TU12|RHLB_SHIB3 ATP-dependent RNA helicase RhlB OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) OX=344609 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ + +E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEVLEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q1R4F9|RHLB_ECOUT ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain UTI89 / UPEC) OX=364106 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B6I4B6|RHLB_ECOSE ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain SE11) OX=409438 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|P0A8J8|RHLB_ECOLI ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain K12) OX=83333 GN=rhlB PE=1 SV=2 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B1IWC0|RHLB_ECOLC ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks) OX=481805 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|P0A8J9|RHLB_ECOL6 ATP-dependent RNA helicase RhlB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rhlB PE=3 SV=2 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q0TAU3|RHLB_ECOL5 ATP-dependent RNA helicase RhlB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) OX=362663 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|A1AHV0|RHLB_ECOK1 ATP-dependent RNA helicase RhlB OS=Escherichia coli O1:K1 / APEC OX=405955 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|A8A6N4|RHLB_ECOHS ATP-dependent RNA helicase RhlB OS=Escherichia coli O9:H4 (strain HS) OX=331112 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B1X9Z4|RHLB_ECODH ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain K12 / DH10B) OX=316385 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|C4ZZ48|RHLB_ECOBW ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B7M5C7|RHLB_ECO8A ATP-dependent RNA helicase RhlB OS=Escherichia coli O8 (strain IAI1) OX=585034 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B7MR01|RHLB_ECO81 ATP-dependent RNA helicase RhlB OS=Escherichia coli O81 (strain ED1a) OX=585397 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B7L8B6|RHLB_ECO55 ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain 55989 / EAEC) OX=585055 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B7MGJ1|RHLB_ECO45 ATP-dependent RNA helicase RhlB OS=Escherichia coli O45:K1 (strain S88 / ExPEC) OX=585035 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|B7UMN5|RHLB_ECO27 ATP-dependent RNA helicase RhlB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) OX=574521 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|A7ZTY2|RHLB_ECO24 ATP-dependent RNA helicase RhlB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) OX=331111 GN=rhlB PE=3 SV=1 Length=421 Score = 135 bits (341), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|Q5RF43|DDX3Y_PONAB ATP-dependent RNA helicase DDX3Y OS=Pongo abelii OX=9601 GN=DDX3Y PE=2 SV=1 Length=658 Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 155/333 (47%), Gaps = 56/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +L++ P+RELA Q ++F ++R ++ GG Q+ LE G ++V T Sbjct 265 PISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVAT 321 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ GK+ L ++LVLDEAD +L G+ I R+ Q + G R ++ Sbjct 322 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ-DTMPPKGVR-HTMMF 379 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + D + + + V V ++ + +++ Sbjct 380 SAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------- 417 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQY 525 +W E + K + + + D ++F TK D+LE + Sbjct 418 -----------------VWVEDLD--KRSFLLDLLGATGRDSLTLVFVETKKGADSLEDF 458 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V Sbjct 459 LYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVR 509 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + + YVHRIGR GR +GLA S Sbjct 510 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 542 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/81 (36%), Positives = 47/81 (58%), Gaps = 6/81 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + I +E + PT +Q +IP+I G D++ A+TGSGKT AF +P++ Sbjct 180 FSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQ 239 Query 64 VY-----ETLKDQQE-GKKGK 78 +Y E LK +E G+ G+ Sbjct 240 IYTDGPGEALKAVKENGRYGR 260 >sp|A6ZUA1|DBP3_YEAS7 ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP3 PE=3 SV=1 Length=523 Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 106/342 (31%), Positives = 164/342 (48%), Gaps = 61/342 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L++ P+RELA Q +N+ D ++ + GGV +Q L+ +VV TP Sbjct 184 QVLVISPTRELASQIYDNLIVL---TDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATP 239 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL+ G ++LSQV +LVLDEAD +L +G+ + I + + +D + Q ++ + Sbjct 240 GRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRE-----TDASKRQTLMFT 294 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT--VHHVVVPVNP--KTDRLWERLGKSH 463 AT +V++L+ M+ P V + D + + +V V+P K +L E L K H Sbjct 295 ATWPK-EVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYH 353 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + P+ K ++ +IF K + +E Sbjct 354 ----------------SGPK---------------------KNEKVLIFALYKKEAARVE 376 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G ++ +HGD +R Q L FK G L+ TDVAARG+DI Sbjct 377 RNLKYNG---------YNIAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPN 427 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V VIN+T P ++YVHRIGR GRA + G A +L TE+EK Sbjct 428 VKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLF-TEQEK 468 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQA + P +L G DV+ AETGSGKT AF +P I Sbjct 135 PTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAI 171 >sp|O00571|DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sapiens OX=9606 GN=DDX3X PE=1 SV=3 Length=662 Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 154/333 (46%), Gaps = 56/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +L++ P+RELA Q ++F ++R ++ GG Q+ LE G ++V T Sbjct 267 PISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVAT 323 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ GK+ L ++LVLDEAD +L G+ I R+ Q + G R ++ Sbjct 324 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ-DTMPPKGVR-HTMMF 381 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + D + + + V V ++ + +++ Sbjct 382 SAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------- 419 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQY 525 +W E K + + + D ++F TK D+LE + Sbjct 420 -----------------VWVEESD--KRSFLLDLLNATGKDSLTLVFVETKKGADSLEDF 460 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V Sbjct 461 LYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVK 511 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + + YVHRIGR GR +GLA S Sbjct 512 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 544 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 6/84 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS++ + I +E + PT +Q +IP+I D++ A+TGSGKT AF +P+ Sbjct 179 IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPI 238 Query 61 IQIVY-----ETLKDQQE-GKKGK 78 + +Y E L+ +E G+ G+ Sbjct 239 LSQIYSDGPGEALRAMKENGRYGR 262 >sp|Q8XAT4|RHLB_ECO57 ATP-dependent RNA helicase RhlB OS=Escherichia coli O157:H7 OX=83334 GN=rhlB PE=3 SV=3 Length=421 Score = 135 bits (341), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 107/339 (32%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q + + + L+ L GG QL VLE+GVDI++ Sbjct 83 NQPRALIMAPTRELAVQIHADAEPLAEATG---LKLGLAYGGDGYDKQLKVLESGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +NL ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAN---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +++++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+AIIF TK C+ + Sbjct 251 -------------------------------------IEEEWPDRAIIFANTKHRCEEIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F +GD+ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPA 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGANGHSISLACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAF 63 >sp|P0CQ79|DBP3_CRYNB ATP-dependent RNA helicase DBP3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP3 PE=3 SV=1 Length=605 Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 109/345 (32%), Positives = 168/345 (49%), Gaps = 54/345 (16%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-ENGVD 341 +P + L++ P+RELA+Q+ ++ F + + L+ + I GGV Q L + Sbjct 251 VPGQIQMLVLAPTRELAQQSHEHLSAFGEQVG---LKSVCIFGGVGKDGQARELSQKDTR 307 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 +VVGTPGR DL +G+L+LS V +LVLDEAD +L G+ + I R+ P +G+ Sbjct 308 VVVGTPGRTLDLADSGELDLSSVSYLVLDEADRMLDAGFENDIRRIIAHTPG-HKEGR-- 364 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVV-VPVNPKTD--RLWE 457 Q ++ SAT V++L+ ++ P + + ++ S + +V V NP+ RL Sbjct 365 QTVMFSATWPE-SVRRLASTFLNNPLRITVGSDELSANKRIEQIVEVLDNPRDKDFRLTH 423 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L K+H++ VH T P + ++F K Sbjct 424 HL-KAHLK---VHPNSKTSP-----------------------------TRILVFALYKK 450 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + LE Y I++ G ++ LHGD R + LE FK G L+ TDVAAR Sbjct 451 EAQRLE-YTIRRAG--------YAVGALHGDMTQEARFKALEAFKTGQQNVLVATDVAAR 501 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G+DI V VINVT P +++VHR GR GRA + G A++ E Sbjct 502 GLDIPDVGLVINVTFPLTTEDFVHRCGRTGRAGKTGKAVTFFTGE 546 Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 1/54 (2%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGK 78 PT IQA S P +L DV+ AETGSGKT AF +P I ++ + L KKG+ Sbjct 196 PTPIQACSWPALLSKKDVVGIAETGSGKTLAFGVPGINLLSQ-LPPVTGSKKGR 248 >sp|O15523|DDX3Y_HUMAN ATP-dependent RNA helicase DDX3Y OS=Homo sapiens OX=9606 GN=DDX3Y PE=1 SV=2 Length=660 Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 155/333 (47%), Gaps = 56/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +L++ P+RELA Q ++F ++R ++ GG Q+ LE G ++V T Sbjct 265 PISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVAT 321 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ GK+ L ++LVLDEAD +L G+ I R+ Q + G R ++ Sbjct 322 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ-DTMPPKGVR-HTMMF 379 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + D + + + V V ++ + +++ Sbjct 380 SAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------- 417 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQY 525 +W E + K + + + D ++F TK D+LE + Sbjct 418 -----------------VWVEDLD--KRSFLLDILGATGSDSLTLVFVETKKGADSLEDF 458 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V Sbjct 459 LYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVR 509 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + + YVHRIGR GR +GLA S Sbjct 510 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 542 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/81 (36%), Positives = 47/81 (58%), Gaps = 6/81 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + I +E + PT +Q +IP+I G D++ A+TGSGKT AF +P++ Sbjct 180 FSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQ 239 Query 64 VY-----ETLKDQQE-GKKGK 78 +Y E LK +E G+ G+ Sbjct 240 IYTDGPGEALKAVKENGRYGR 260 >sp|P0CQ78|DBP3_CRYNJ ATP-dependent RNA helicase DBP3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP3 PE=3 SV=1 Length=605 Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 109/345 (32%), Positives = 168/345 (49%), Gaps = 54/345 (16%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-ENGVD 341 +P + L++ P+RELA+Q+ ++ F + + L+ + I GGV Q L + Sbjct 251 VPGQIQMLVLAPTRELAQQSHEHLSAFGEQVG---LKSVCIFGGVGKDGQARELSQKDTR 307 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 +VVGTPGR DL +G+L+LS V +LVLDEAD +L G+ + I R+ P +G+ Sbjct 308 VVVGTPGRTLDLADSGELDLSSVSYLVLDEADRMLDAGFENDIRRIIAHTPG-HKEGR-- 364 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVV-VPVNPKTD--RLWE 457 Q ++ SAT V++L+ ++ P + + ++ S + +V V NP+ RL Sbjct 365 QTVMFSATWPE-SVRRLASTFLNNPLRITVGSDELSANKRIEQIVEVLDNPRDKDFRLTH 423 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L K+H++ VH T P + ++F K Sbjct 424 HL-KAHLK---VHPNSKTSP-----------------------------TRILVFALYKK 450 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + LE Y I++ G ++ LHGD R + LE FK G L+ TDVAAR Sbjct 451 EAQRLE-YTIRRAG--------YAVGALHGDMTQEARFKALEAFKTGQQNVLVATDVAAR 501 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G+DI V VINVT P +++VHR GR GRA + G A++ E Sbjct 502 GLDIPDVGLVINVTFPLTTEDFVHRCGRTGRAGKTGKAVTFFTGE 546 Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 33/54 (61%), Gaps = 1/54 (2%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGK 78 PT IQA S P +L DV+ AETGSGKT AF +P I ++ + L KKG+ Sbjct 196 PTPIQACSWPALLSKKDVVGIAETGSGKTLAFGVPGINLLSQ-LPPVTGSKKGR 248 >sp|B9XXL6|RHPA_HELP8 DEAD-box ATP-dependent RNA helicase RhpA OS=Helicobacter pylori (strain B128) OX=544406 GN=rhpA PE=1 SV=1 Length=492 Score = 137 bits (344), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 93/333 (28%), Positives = 163/333 (49%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + I + K+ + + + + GG + + Q ++ +++ TP Sbjct 89 EALVITPTRELAMQISDEIFKLGKHT---RTKTVCVYGGQSVKKQCEFIKKNPQVMIATP 145 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL D + +++ + +VLDE+D +L G+ D I + + +P Q+++ S Sbjct 146 GRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPS------EAQILLFS 199 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +K+L++KI+ P + + P + + + T R + + H R Sbjct 200 ATMPE-PIKRLADKILENPIKIHI-----APSNITNTDI-----TQRFY--VINEHER-- 244 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 +EAI +R + ++I+F RTK + D L Q+ Sbjct 245 ------------------AEAI--------MRLLDTQAPKKSIVFTRTKKEADELHQFLA 278 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + + LHGD +R+ ++ FKK D L+ TDVA+RG+DI GV +V Sbjct 279 SKN---------YKSTALHGDMDQRDRRASIMAFKKNDADVLVATDVASRGLDISGVSHV 329 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 N LP ++Y+HRIGR GRA + G+AI+LV Sbjct 330 FNYHLPLNTESYIHRIGRTGRAGKKGMAITLVT 362 Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 42/59 (71%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F+++G+ + ++V E + P+ IQ ++IP +L G DV+ A+TG+GKT AF++P+I Sbjct 21 SFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPII 79 >sp|Q0CXD0|IF4A_ASPTN ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=tif1 PE=3 SV=2 Length=396 Score = 135 bits (339), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 110/367 (30%), Positives = 172/367 (47%), Gaps = 65/367 (18%) Query 281 KFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K PN A +ALIV P+RELA+Q + +++ + IGG A RD + L+ Sbjct 84 KIDPNLKACQALIVAPTRELAQQIQKVVVAIGDFMN---INCHACIGGTAIRDDMKALQE 140 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 G IVVGTPGR+ D++ L Q++ +LDEAD +LS+G+++ I + +PQ T Sbjct 141 GPPIVVGTPGRIQDMIQRRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQAT--- 197 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 QV++ SAT+ DV +++ K M P + +K ++ + + + V Sbjct 198 ---QVVLLSATMPQ-DVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVE--------- 244 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 E W + L Y I QA+IFC T+ Sbjct 245 -----------------------KEEWK--LDTLSDLYETVTIT-----QAVIFCNTRRK 274 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L F+ +HGD + +R ++ F+ G R LI TD+ ARG Sbjct 275 VDWLTDKL---------TARDFTVSAMHGDMEQSQRDIIMKEFRSGSSRVLIATDLLARG 325 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 326 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQF 380 Query 639 YNTRLKE 645 Y+T+++E Sbjct 381 YSTQIEE 387 Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 0/67 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + E+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 24 SFDSMELKAELLRGVYAYGFERPSAIQQRAIMPIIKGNDVIAQAQSGTGKTATFSISALQ 83 Query 63 IVYETLK 69 + LK Sbjct 84 KIDPNLK 90 >sp|Q6GVM6|DDX3Y_PANTR ATP-dependent RNA helicase DDX3Y OS=Pan troglodytes OX=9598 GN=DDX3Y PE=2 SV=1 Length=660 Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 155/333 (47%), Gaps = 56/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +L++ P+RELA Q ++F ++R ++ GG Q+ LE G ++V T Sbjct 265 PISLVLAPTRELAVQIYEEARKFSY---RSRVRPCVVYGGADIGQQIRDLERGCHLLVAT 321 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ GK+ L ++LVLDEAD +L G+ I R+ Q + G R ++ Sbjct 322 PGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ-DTMPPKGVR-HTMMF 379 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT FP + + D + + + V V ++ + +++ Sbjct 380 SAT---------------FPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV------- 417 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQY 525 +W E + K + + + D ++F TK D+LE + Sbjct 418 -----------------VWVEDLD--KRSFLLDILGAAGTDSLTLVFVETKKGADSLEDF 458 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V Sbjct 459 LYHEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVR 509 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN LP + + YVHRIGR GR +GLA S Sbjct 510 HVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF 542 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 46/81 (57%), Gaps = 6/81 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + I ++ + PT +Q +IP+I G D++ A+TGSGKT AF +P++ Sbjct 180 FGDIDMGEIIMGNIQLTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQ 239 Query 64 VY-----ETLKDQQE-GKKGK 78 +Y E LK +E G+ G+ Sbjct 240 IYTDGPGEALKAVKENGRYGR 260 >sp|Q54QS3|DDX3_DICDI Probable ATP-dependent RNA helicase ddx3 OS=Dictyostelium discoideum OX=44689 GN=ddx3 PE=3 SV=1 Length=712 Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 106/342 (31%), Positives = 164/342 (48%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+AL++ P+RELA+Q + +F + ++I GG Q++ L+ G DI+V T Sbjct 331 PRALVLAPTRELAQQIFDEANKFSY---GSPVSSVVIYGGAEVFHQINELDRGCDILVAT 387 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR-LQVIV 405 GRL DL+ G+++LS++++LVLDEAD +L G+ I ++ I + G R Q ++ Sbjct 388 TGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIRQI---ISEFDMPGCRDRQTLM 444 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT ++ L+ ++ ++ LK V V T + +R+ ++ Sbjct 445 FSATFPK-QIQNLAADFLY--NYIFLK-------------VGVVGTTQNITQRI--EYVV 486 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD-QAIIFCRTKIDCDNLEQ 524 +D K Y + + K D +IF TK CD L Sbjct 487 EED------------------------KNSYLLDYLSGLKSDGLCLIFVETKRSCDTL-T 521 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 YF+ Q F C+HGD ER+ L+ F+ FL+ TD+A+RG+ I V Sbjct 522 YFLNQ--------RNFPTTCIHGDLTQPERENALQSFRSFATPFLVATDIASRGLHIGNV 573 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP + YVHRIGR GRA + GLAIS + + V Sbjct 574 NLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFNEKNKPV 615 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F+++ + + ++ + PT +Q ++P+IL D++ A+TGSGKT AF P+ Sbjct 246 LNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPI 305 Query 61 I 61 I Sbjct 306 I 306 >sp|A3Q9R3|RHLB_SHELP ATP-dependent RNA helicase RhlB OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) OX=323850 GN=rhlB PE=3 SV=1 Length=435 Score = 135 bits (341), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 106/339 (31%), Positives = 165/339 (49%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+++ P+RELA Q + + K+ L+ ++ GG + Q VL+ GVDI++ Sbjct 83 NQPRAIVMAPTRELAIQIAKDGELLAKHTG---LKVGIVYGGESYEVQRKVLDKGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G +NLS ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRIIDYVRQGVINLSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAN---ERLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLK-GEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 SATL S V++L+ M+ P V++ E + + + P RL L + Sbjct 197 F-SATL-SMKVQELAYDHMNDPEKVEIAPSEKTSKNITEEIFYPSMEDKMRLLLTLIE-- 252 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 E W E +AI+F TK C+NL Sbjct 253 -------------------EDWPE--------------------KAIVFSNTKHSCENLW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + GH+ L GD +R + LE+F KG++ L+ TDVAARG+ I Sbjct 274 AHL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTKGELDILVATDVAARGLHISD 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA + G+++S E Sbjct 325 VSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEE 363 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/55 (42%), Positives = 35/55 (64%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F++ + PEI QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFSLHPEIQQALVESGFEYCTPIQALSLPILLEHKDIAGQAQTGTGKTLAFLV 65 >sp|Q5B948|IF4A_EMENI ATP-dependent RNA helicase eIF4A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=tif1 PE=3 SV=2 Length=398 Score = 135 bits (339), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 110/367 (30%), Positives = 173/367 (47%), Gaps = 65/367 (18%) Query 281 KFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K PN A +ALIV P+RELA+Q + +++ ++ IGG A RD ++ L Sbjct 86 KLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMN---IQCHACIGGTAVRDDMNALRE 142 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 G IVVGTPGR+ D++ L Q++ +LDEAD +LS+G+++ I + +PQ T Sbjct 143 GPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQST--- 199 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 QV++ SAT+ DV +++ K M P + +K ++ + + + V Sbjct 200 ---QVVLLSATMPQ-DVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVE--------- 246 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 E W + L Y I QA+IFC T+ Sbjct 247 -----------------------KEEWK--LDTLSDLYETVTIT-----QAVIFCNTRRK 276 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L F+ +HGD + +R ++ F+ G R LI TD+ ARG Sbjct 277 VDWLTDKL---------TARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARG 327 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 328 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQF 382 Query 639 YNTRLKE 645 Y+T+++E Sbjct 383 YSTQIEE 389 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQ 85 >sp|P46942|DB10_NICSY ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1 Length=607 Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 101/342 (30%), Positives = 156/342 (46%), Gaps = 63/342 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+RELA Q +F K + ++ + GG QL L GVDIVV T Sbjct 218 PTILVLSPTRELATQIQAEAVKFGK---SSRISCTCLYGGAPKGPQLRELSRGVDIVVAT 274 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+D++ +++L QV +LVLDEAD +L G+ I ++ ++P + Q ++ Sbjct 275 PGRLNDILEMRRVSLGQVSYLVLDEADRMLDMGFEPQIRKIVKEVP------VQRQTLMY 328 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSV---PDTVHHVVVPVNPKTDRLWERLGKSH 463 +AT V+K++ ++ V++ D + H+ V + + R E++ +S Sbjct 329 TATWPK-GVRKIAADLLVNSVQVNIGNVDELVANKSITQHIEVVLPMEKQRRVEQILRSK 387 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 PG+ + IIFC TK CD L Sbjct 388 ------------EPGS----------------------------KIIIFCSTKKMCDQLS 407 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + F +HGD+ ER L +F+ G L+ TDVAARG+DI Sbjct 408 RNLTRN----------FGAAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKD 457 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + VIN P ++YVHRIGR GRA GLA + + + K Sbjct 458 IRVVINYDFPTGIEDYVHRIGRTGRAGASGLAYTFFSDQDSK 499 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/74 (34%), Positives = 41/74 (55%), Gaps = 0/74 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F G EI + + + + PT IQA+S P+ L G D++ A+TGSGKT + +P Sbjct 144 LTSFEATGFPSEIVREMHQAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLMPA 203 Query 61 IQIVYETLKDQQEG 74 + + K+ Q G Sbjct 204 FIHLQQRRKNPQLG 217 >sp|P0CQ72|FAL1_CRYNJ ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=FAL1 PE=3 SV=1 Length=396 Score = 134 bits (338), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 162/358 (45%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + Y++ + IGG + + + LE G +V GTP Sbjct 93 QALVLSPTRELAVQIQTVVLALGDYMN---VSCHACIGGTSVGEDIRKLEAGQQVVSGTP 149 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ L+LDE+D LL++G+ D I ++ +P T QV+V S Sbjct 150 GRVFDMIRRRNLRTKDIKMLILDESDELLNKGFKDQIYDIYRYLPPAT------QVVVVS 203 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL DV +++ K M P + +K ++ + + V V Sbjct 204 ATL-PHDVLEMTTKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------------- 245 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W K + + QA+IFC T+ D L + Sbjct 246 ---------------EDW-------KFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKM- 282 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HG+ ER + F+ G R LI TDV ARGID+ V V Sbjct 283 --------REANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLV 334 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 335 INYDLPTSRENYLHRIGRSGRFGRKGVAINFVTVDDVRILRDI-----EQYYSTQIDE 387 Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 40/70 (57%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ + + ++ P+ IQ +I I+ G DV+ A++G+GKT FSI ++Q Sbjct 24 TFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQ 83 Query 63 IVYETLKDQQ 72 + L++ Q Sbjct 84 SIDTNLRETQ 93 >sp|P0CQ73|FAL1_CRYNB ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=FAL1 PE=3 SV=1 Length=396 Score = 134 bits (338), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 162/358 (45%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q + Y++ + IGG + + + LE G +V GTP Sbjct 93 QALVLSPTRELAVQIQTVVLALGDYMN---VSCHACIGGTSVGEDIRKLEAGQQVVSGTP 149 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ L+LDE+D LL++G+ D I ++ +P T QV+V S Sbjct 150 GRVFDMIRRRNLRTKDIKMLILDESDELLNKGFKDQIYDIYRYLPPAT------QVVVVS 203 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL DV +++ K M P + +K ++ + + V V Sbjct 204 ATL-PHDVLEMTTKFMTDPVRILVKRDELTLEGIKQFFVAVEK----------------- 245 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W K + + QA+IFC T+ D L + Sbjct 246 ---------------EDW-------KFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKM- 282 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HG+ ER + F+ G R LI TDV ARGID+ V V Sbjct 283 --------REANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLV 334 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 335 INYDLPTSRENYLHRIGRSGRFGRKGVAINFVTVDDVRILRDI-----EQYYSTQIDE 387 Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 40/70 (57%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ + + ++ P+ IQ +I I+ G DV+ A++G+GKT FSI ++Q Sbjct 24 TFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQ 83 Query 63 IVYETLKDQQ 72 + L++ Q Sbjct 84 SIDTNLRETQ 93 >sp|Q54CE0|DDX17_DICDI Probable ATP-dependent RNA helicase ddx17 OS=Dictyostelium discoideum OX=44689 GN=ddx17 PE=3 SV=1 Length=785 Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 99/342 (29%), Positives = 164/342 (48%), Gaps = 57/342 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F ++ + GG + Q++ L+ GV+IV+ Sbjct 456 DGPIVLVLAPTRELALQIQEETNKFG---GTSQISNTCVYGGASKHTQVAALKKGVEIVI 512 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ I Q+ D Q + Sbjct 513 ATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKI---ISQIRPD---RQTL 566 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +P V D + D H+ V HI Sbjct 567 MFSAT---------------WPKEVQALAHDFLTD---HIQV----------------HI 592 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + ++ A N R + + + ++L +V + ++ I+F T+ D+L++ Sbjct 593 GSTEITANHNVRQIVEVCQDFEKKERMLSFLGSV-----GRDEKVIVFAETRKGVDDLQR 647 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G F + +HG++ ER L +FK G V +I TDVA+RG+DI + Sbjct 648 VLQFSG---------FKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDI 698 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 YV+N P+ + Y+HRIGR RA G++ SL+ T+ ++ Sbjct 699 KYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARL 740 Score = 40.8 bits (94), Expect = 0.053, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 27/37 (73%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQ+++ P+ L G D++ A+TGSGKT AF +P I Sbjct 407 PTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSI 443 >sp|A1SAL1|RHLB_SHEAM ATP-dependent RNA helicase RhlB OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) OX=326297 GN=rhlB PE=3 SV=1 Length=439 Score = 135 bits (341), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 106/338 (31%), Positives = 167/338 (49%), Gaps = 57/338 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+++ P+RELA Q + K+ L+ ++ GG Q VL+ GVD+++ Sbjct 83 NQPRAIVMAPTRELAIQIAKDATLLSKH---SGLKVGIVYGGEGYEAQRKVLDKGVDVLI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G +NL ++ +VLDEAD + G+ I + N++P +RL ++ Sbjct 140 GTTGRIIDYVRQGVINLGAIQAVVLDEADRMFDLGFIKDIRFLFNRMPGAK---ERLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SATL S V++L+ M+ P V++ E+ KT R Sbjct 197 F-SATL-SMKVQELAYDHMNDPVKVEIAPEE---------------KTSR---------- 229 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 N + P M + +K+L I+E ++AI+F TK C+NL Sbjct 230 ---------NIKEEIFYPSM-EDKLKLLHS-----LIEEDWPEKAIVFANTKYQCENLWA 274 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + GH+ L GD +R + LE+F + ++ L+ TDVAARG+ I V Sbjct 275 SL-------EADGHRVGL--LTGDVPQKKRLKILEQFTQSELDILVATDVAARGLHISDV 325 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA + G+++S E Sbjct 326 SHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEE 363 Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 35/55 (64%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + E+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKTLAFLV 65 >sp|B6EPA4|RHLB_ALISL ATP-dependent RNA helicase RhlB OS=Aliivibrio salmonicida (strain LFI1238) OX=316275 GN=rhlB PE=3 SV=1 Length=434 Score = 135 bits (340), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 110/336 (33%), Positives = 167/336 (50%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I+ P+RELA Q N+ + I + L+ L GG Q V+E GVDI++GT Sbjct 85 PRAIIMAPTRELAIQIYNDAESL---IASTGLKAALAYGGERYEKQQKVIEAGVDILIGT 141 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D G+++ ++ +VLDEAD + G+ I + ++P + +RL ++ Sbjct 142 TGRIIDFYKQGQIDFKAIQVVVLDEADRMFDLGFIKDIRFVFRRMP---APAERLNMLF- 197 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M P HVVV + KT H+ T Sbjct 198 SATL-SYRVQELAFEHMQEP---------------EHVVVEPDQKT---------GHLIT 232 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +++ N + +L+ I+E D+AIIF TK C+ + + Sbjct 233 EELFYPSN-----------DHKMALLQT-----LIEEEWPDRAIIFANTKHKCELVWGHL 276 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK H+ L GD +R++ LE F KG+V L+ TDVAARG+ I V + Sbjct 277 -----AADK--HRVGL--LTGDVPQKKRERILEEFTKGEVDILVATDVAARGLHIPQVTH 327 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LP+E ++YVHRIGR GRA G +IS E Sbjct 328 VFNFDLPNEAEDYVHRIGRTGRAGESGNSISFACEE 363 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/53 (36%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++G+ P++ + ++ T IQA+++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAF 63 >sp|Q49Z29|CSHA_STAS1 DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=cshA PE=3 SV=1 Length=506 Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 102/334 (31%), Positives = 161/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q ++K F K ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAESLKAFAK---GQNIQVVTVFGGMPIDRQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + + L+LDEAD +++ G+ D + + ++IP ++ Q ++ S Sbjct 128 GRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMKFIMDKIP-----AEQRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P V + E S P ++ +V K D L Sbjct 183 ATMPKA-IQTLVQQFMKSPVIVKTMNNEMSDPQIEEYYTIVKELEKFDTFTSFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQLDILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+AI+ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKKGVAITFV 344 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ ++A+ ++ M + T IQ ESIPL L G DVL A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDKMAETLQSMGFNEATPIQKESIPLALEGKDVLGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYE 66 I+ V + Sbjct 61 IEKVAD 66 >sp|P41376|IF4A1_ARATH Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana OX=3702 GN=EIF4A1 PE=1 SV=1 Length=412 Score = 135 bits (339), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 112/415 (27%), Positives = 185/415 (45%), Gaps = 75/415 (18%) Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ--------VTQTKFLPNAPKALI 291 + +G E+ + G V K D +++ SG + + Q F +AL+ Sbjct 55 YAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALV 112 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 + P+RELA+Q ++ Y+ ++ +GG + R+ +L+ GV +VVGTPGR+ Sbjct 113 LAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVF 169 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V SAT+ Sbjct 170 DMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFSATMP 223 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 + +++ K M P + +K ++ + + V V Sbjct 224 P-EALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVE---------------------- 260 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 E W ++ L Y AI Q++IF T+ D L Sbjct 261 ----------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL--------- 294 Query 532 GPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 DK + + HGD + R + F+ G R LI TD+ ARGID+ V VIN Sbjct 295 -TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINF 353 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 LP + +NY+HRIGR GR R G+AI+ V + E++ + + + YN ++E Sbjct 354 DLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI-----QKFYNVVVEE 403 Score = 33.9 bits (76), Expect = 5.8, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99 >sp|P41379|IF4A2_NICPL Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1 Length=413 Score = 135 bits (339), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 102/359 (28%), Positives = 169/359 (47%), Gaps = 65/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L++GV +VVGTP Sbjct 110 QALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILQSGVHVVVGTP 166 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 167 GRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 220 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K ++ + + V V+ Sbjct 221 ATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVD------------------ 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 262 --------------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 295 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 296 -----TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 350 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + + YN ++E Sbjct 351 VINYDLPTQPENYLHRIGRSGRFGRKGVAINSVTKDDERMLFDI-----QKFYNVVIEE 404 Score = 33.9 bits (76), Expect = 6.0, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 >sp|A1CH78|DED1_ASPCL ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=ded1 PE=3 SV=1 Length=681 Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 109/364 (30%), Positives = 163/364 (45%), Gaps = 62/364 (17%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 A K P V +Q SG Q++ + P +LI+ P+REL Q + ++F Sbjct 251 AFQKGPSA--VPAQASG--QMSYGRQRKAYPTSLILAPTRELVSQIFDEARKFAY---RS 303 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 +R ++ GG QL +E G D++V TPGRL DL+ G+++L + +LVLDEAD +L Sbjct 304 WVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNINYLVLDEADRML 363 Query 377 SQGYSDFINRM--HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 G+ I R+ +P V Q ++ SAT FP + + Sbjct 364 DMGFEPQIRRIVEGEDMPSVNER----QTLMFSAT---------------FPRDIQMLAR 404 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 D + D V V V ++ + +++ +DV + S + IL Sbjct 405 DFLKDYVFLSVGRVGSTSENITQKVEY----VEDVDKR-------------SVLLDILH- 446 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 +IF TK D L + I Q +F +HGDR ER Sbjct 447 -------THGTSGLTLIFVETKRMADALSDFLINQ---------RFPATAIHGDRTQRER 490 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 ++ LE F+ L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA G+ Sbjct 491 ERALEMFRSARCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGI 550 Query 615 AISL 618 A + Sbjct 551 ATAF 554 Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 37/64 (58%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AF+ + + ++ + PT +Q SIP+++ G D++ A+TGSGKTG F P++ Sbjct 190 AFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILS 249 Query 63 IVYE 66 ++ Sbjct 250 QAFQ 253 >sp|Q40470|IF4A7_TOBAC Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 134 bits (338), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 103/358 (29%), Positives = 167/358 (47%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L++GV +VVGTP Sbjct 110 QALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILQSGVHVVVGTP 166 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 167 GRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 220 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K +D + + V V+ Sbjct 221 ATMPP-EALEITRKFMNKPVRILVKRDDVTLEGIKQFYVNVD------------------ 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 262 --------------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWLTDKM- 299 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + H S HGD + R + F+ G R LI TD+ ARGID+ V V Sbjct 300 ------RTRDHTVSAT--HGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLV 351 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP + +NY+HRIGR GR R G+AI+ V + E++ + + YN ++E Sbjct 352 INYDLPTQPENYLHRIGRSGRFGRKGVAINFVIKDDERMLSDI-----QRFYNVVIEE 404 Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 >sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=ded1 PE=3 SV=1 Length=676 Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 99/340 (29%), Positives = 151/340 (44%), Gaps = 70/340 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + ++F +R ++ GG QL +E G D++V T Sbjct 278 PTSLILAPTRELVSQIFDEARKFAY---RSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 334 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++LVLDEAD +L G+ I R+ +P V Q + Sbjct 335 PGRLVDLIERGRISLVNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPNVNER----QTL 390 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL----- 459 + SAT FP + + D + D V V V ++ + +++ Sbjct 391 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVED 435 Query 460 -GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K + D +H + +IF TK Sbjct 436 HDKRSVLLDILHTHGTS-------------------------------GLTLIFVETKRM 464 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L + + Q +F +HGDR ER++ LE F+ G L+ T VAARG Sbjct 465 ADALSDFLLNQ---------RFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARG 515 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +DI V +VIN LP + +YVHRIGR GRA G+A + Sbjct 516 LDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF 555 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 0/65 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AF+ + + ++ + PT +Q SIP+++ G D++ A+TGSGKTG F P++ Sbjct 191 AFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILS 250 Query 63 IVYET 67 ++T Sbjct 251 QAFQT 255 >sp|Q501J6|DDX17_MOUSE Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Length=650 Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 161/334 (48%), Gaps = 55/334 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA+Q + K +L+ I GG Q+ LE GV+I + Sbjct 164 DGPICLVLAPTRELAQQVQQVADDYGKC---SRLKSTCIYGGAPKGPQIRDLERGVEICI 220 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + +GK NL + +LVLDEAD +L G+ I ++ +QI Q + Sbjct 221 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 274 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V++L+E + T +++ ++ + +H ++ + D E Sbjct 275 MWSATWPK-EVRQLAEDFLRDYTQINV---GNLELSANHNILQI---VDVCME------- 320 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 KD+ K+++ + A KE+K IIF TK CD+L + Sbjct 321 -----SEKDH---------------KLIQLMEEIMAEKENK---TIIFVETKRRCDDLTR 357 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G + +C+HGD+ ER L F+ G LI TDVA+RG+D+ V Sbjct 358 RMRRDG---------WPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDV 408 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN P+ ++YVHRIGR R+ G A + Sbjct 409 KFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTF 442 Score = 41.6 bits (96), Expect = 0.030, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 25/37 (68%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQ + PL L G D++ A+TGSGKT A+ +P I Sbjct 115 PTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI 151 >sp|Q40465|IF411_TOBAC Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 134 bits (338), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 101/359 (28%), Positives = 169/359 (47%), Gaps = 65/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L++GV +VVGTP Sbjct 110 QALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILQSGVHVVVGTP 166 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 167 GRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 220 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K ++ + + V V+ Sbjct 221 ATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVD------------------ 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 262 --------------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 295 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK +G + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 296 -----TDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 350 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP + +NY+HRIG GR R G++I+ V + E++ + + + YN ++E Sbjct 351 VINYDLPTQPENYLHRIGHSGRFGRKGVSINFVTKDDERMLFDI-----QKFYNVVIEE 404 Score = 33.5 bits (75), Expect = 7.8, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100 >sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium discoideum OX=44689 GN=ddx27 PE=3 SV=1 Length=783 Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 109/380 (29%), Positives = 172/380 (45%), Gaps = 63/380 (17%) Query 286 APKALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 A + LI+ P+RELA Q + N+ QF + LI+GG++ + Q L D+ Sbjct 261 AIRVLILLPTRELALQCQSVMENLAQF------SNITSCLIVGGLSNKAQEVELRKSPDV 314 Query 343 VVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 V+ TPGRL D L++ + L + L+LDEAD LL G+ D IN++ P Sbjct 315 VIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPT------NR 368 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 Q ++ SATL+ +VK L++ + P V + V T+ V + P+ Sbjct 369 QTMLFSATLND-EVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIKPQ---------- 417 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 H D RP + S ++ IIFCR+K + Sbjct 418 --------HLSD--RPAI----LLSLCTRVFN------------QGGTIIFCRSKKEVHR 451 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L F G D K + LHG+ +R +L++F+ G V +L+ +DVA+RG+DI Sbjct 452 LRIIF----GLSDLKAAE-----LHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDI 502 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 GV VIN +P+ NY+HR+GR RA G + S + K+ + ++ + + Sbjct 503 IGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSCSFITDNDRKLLKDIV-TKARNKAKS 561 Query 642 RLKEDGGCTIWYNEMQLLSE 661 R W N ++ L+E Sbjct 562 RSVSQDNVNFWRNRIEELTE 581 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/62 (44%), Positives = 43/62 (69%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E+ + + +AV+++ + PT IQA++IPL L G D+L +A TGSGKT AF +PV Sbjct 189 LPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPV 248 Query 61 IQ 62 ++ Sbjct 249 LE 250 >sp|A7TJ36|DBP3_VANPO ATP-dependent RNA helicase DBP3 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP3 PE=3 SV=1 Length=530 Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 110/345 (32%), Positives = 160/345 (46%), Gaps = 61/345 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N + LI+ P+RELA Q +N+ D L + GGV +Q + L+ +VV Sbjct 188 NGIQVLIISPTRELASQIYDNLVIL---TDKVGLECCCVYGGVPKDEQRTQLKRS-QVVV 243 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL DL+ G NLS V +LVLDEAD +L +G+ + I N I + S G+ Q + Sbjct 244 ATPGRLLDLIQEGAANLSNVNYLVLDEADRMLEKGFEEDI---KNIIRETKSTGR--QTL 298 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNP--KTDRLWERLG 460 + +AT +V++L+ M+ P V + D S + +V ++P K +L E L Sbjct 299 MFTATWPK-EVRELASTFMNSPIKVSIGNTDELSANKRITQIVEVIDPFKKERKLLELLK 357 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K + K D+ +IF K + Sbjct 358 KYQSGS-------------------------------------KKDDKVLIFALYKKEAA 380 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +E+ G + +HGD +R L+ FK G L+ TDVAARG+D Sbjct 381 RVERNLNYNG---------YKVSAIHGDLSQQQRTNALDEFKTGRSSILLATDVAARGLD 431 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 I V VIN+T P ++YVHRIGR GRA + G A +L TE+EK Sbjct 432 IPNVKTVINLTFPLTVEDYVHRIGRTGRAGKTGTAHTLF-TEQEK 475 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/53 (51%), Positives = 32/53 (60%), Gaps = 1/53 (2%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 PT IQA S P +L G DV+ AETGSGKT AF +P I + T + GK G Sbjct 138 PTPIQAVSWPYLLAGKDVIGVAETGSGKTFAFGVPAINNIL-TKSGSKPGKNG 189 >sp|Q9Z6C9|CSHA_LIMRT ATP-dependent RNA helicase CshA OS=Limosilactobacillus reuteri OX=1598 GN=cshA PE=3 SV=1 Length=497 Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 104/346 (30%), Positives = 167/346 (48%), Gaps = 61/346 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 PN +A+I+ P+RELA QT + + K + +R ++ GG R Q+ L+ I+ Sbjct 68 PNI-QAIIISPTRELAIQTQEELYRLGK---DKHVRVQVVYGGADIRRQIKSLKQHPQIL 123 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 VGTPGRL D ++ + L ++ LVLDEAD +L+ G+ + I + + P D + Q Sbjct 124 VGTPGRLRDHINRHTVKLDHIKTLVLDEADEMLNMGFLEDIESIIKETP----DDR--QT 177 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT+ ++K++ + M P V +K ++ D V D+ + Sbjct 178 LLFSATMPP-EIKRIGVQFMSDPETVRIKAKELTTDLV-----------DQYY------- 218 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 V A+D K + R I D I+F RTK D L Sbjct 219 -----VRARDYE-----------------KFDIMTRLIDVQDPDLTIVFGRTKRRVDELS 256 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + I +G ++ +HGD +R + + +FK ++ L+ TDVAARG+DI G Sbjct 257 KGLIARG---------YNAAGIHGDLTQDKRSKIMWKFKNNELDILVATDVAARGLDISG 307 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 V +V N +P + +YVHRIGR GRA G++++ V T E + H Sbjct 308 VTHVYNYDIPSDPDSYVHRIGRTGRAGHHGVSLTFV-TPNEMDYLH 352 Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 42/61 (69%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+G+ + +A++ + T IQ ++IP++L G DV+ A+TG+GKT AF +P+I+ Sbjct 3 FSELGLSDSLLKAIKRSGYEEATPIQEQTIPMVLEGKDVIGQAQTGTGKTAAFGLPIIEN 62 Query 64 V 64 V Sbjct 63 V 63 >sp|Q5HME0|CSHA_STAEQ DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=cshA PE=3 SV=1 Length=509 Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 162/334 (49%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F K K++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSK---GQKVQVVTVFGGMPIERQIKALKRGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP ++ Q ++ S Sbjct 128 GRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFIMDKIP-----AEQRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDT-VHHVVVPVNPKTDRLWERLGKSHIR 465 AT+ +++L ++ M P + + E S P ++ +V K D L Sbjct 183 ATMPKA-IQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LLSKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q +E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=ded1 PE=3 SV=1 Length=678 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/340 (29%), Positives = 152/340 (45%), Gaps = 70/340 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + ++F +R ++ GG QL +E G D++V T Sbjct 275 PTSLILAPTRELVSQIFDEARKFAY---RSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 331 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++L+LDEAD +L G+ I R+ +P V Q + Sbjct 332 PGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPHVNDR----QTL 387 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL----- 459 + SAT FP + + D + D V V V ++ + +++ Sbjct 388 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVED 432 Query 460 -GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K + D +H + +IF TK Sbjct 433 HDKRSVLLDILHTHGTS-------------------------------GLTLIFVETKRM 461 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D+L + + Q +F +HGDR ER++ LE F+ G L+ T VAARG Sbjct 462 ADSLSDFLLNQ---------RFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARG 512 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +DI V +VIN LP + +YVHRIGR GRA G+A + Sbjct 513 LDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF 552 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 0/75 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AF+ + + + ++ + PT +Q SIP+++ G D++ A+TGSGKTG F P++ Sbjct 188 AFTNPPLDDHLIENIKLAHYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILS 247 Query 63 IVYETLKDQQEGKKG 77 Y+ + G Sbjct 248 QAYQNGPSAAPAQAG 262 >sp|Q2NQB2|RHLB_SODGM ATP-dependent RNA helicase RhlB OS=Sodalis glossinidius (strain morsitans) OX=343509 GN=rhlB PE=3 SV=1 Length=415 Score = 134 bits (338), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 110/342 (32%), Positives = 162/342 (47%), Gaps = 65/342 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE GVDI+V Sbjct 83 NQPRALIMAPTRELAVQIHSDAEPLAQATG---LKMGLAYGGDGYDKQLKVLEAGVDILV 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +N+S ++ +VLDEAD + G+ I + ++P RL ++ Sbjct 140 GTTGRLIDYTKQNYVNMSAIQVVVLDEADRMFDLGFIKDIRWLFRRMPAAAG---RLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV----VVPVNPKTDRLWERLG 460 SATL S+ V++L+ + M+ +V++ + + T H + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEHMNNAEYVEV---EPLQKTGHRIQEELFYPSNEEKMRLLQTL- 250 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+E D+ IIF TK C+ Sbjct 251 ----------------------------------------IEEEWPDRCIIFANTKHRCE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 ++ G GH+ L GD R + LE+F +G + L+ TDVAARG+ Sbjct 271 DI-------WGHLAADGHRVGL--LTGDVSQKRRLRILEKFTQGALDILVATDVAARGLH 321 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 322 IPSVTHVFNYDLPDDCEDYVHRIGRTGRAGESGCSISLACEE 363 Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust. Identities = 21/53 (40%), Positives = 31/53 (58%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P I + ++ + T IQA ++P L G DV A+TG+GKT AF Sbjct 11 FSDFALYPPIVEVLDSKGFNNCTPIQALTLPTTLAGKDVAGQAQTGTGKTLAF 63 >sp|Q2UGK3|DED1_ASPOR ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=ded1 PE=3 SV=1 Length=675 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/335 (29%), Positives = 153/335 (46%), Gaps = 60/335 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + ++F +R ++ GG QL +E G D++V T Sbjct 274 PTSLILAPTRELVSQIFDEARKFAY---RSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 330 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++L+LDEAD +L G+ I R+ +P V Q + Sbjct 331 PGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPHVNDR----QTL 386 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + D + D V V V ++ + +++ ++ Sbjct 387 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKV--EYV 429 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLE 523 D K + + H +IF TK D+L Sbjct 430 EDHD------------------------KRSVLLDILHTHGTSGLTLIFVETKRMADSLS 465 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + Q +F +HGDR ER++ LE F+ G L+ T VAARG+DI Sbjct 466 DFLLNQ---------RFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPN 516 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V +VIN LP + +YVHRIGR GRA G+A + Sbjct 517 VTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF 551 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 18/42 (43%), Positives = 29/42 (69%), Gaps = 0/42 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 PT +Q SIP+++ G D++ A+TGSGKTG F P++ ++ Sbjct 209 PTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAFQ 250 >sp|O13370|DED1_SCHPO ATP-dependent RNA helicase ded1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ded1 PE=1 SV=1 Length=636 Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/335 (30%), Positives = 155/335 (46%), Gaps = 60/335 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+REL Q ++ +K+ +R + GG R Q+ ++ G D++ T Sbjct 256 PTTLILAPTRELVCQIH---EESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSAT 312 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++L+ ++FLVLDEAD +L G+ PQ+ + IV Sbjct 313 PGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFE----------PQI-------RHIVE 355 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 A + S + ++ FP + L D + D V V V ++ + +++ Sbjct 356 GADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKV------- 408 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ---AIIFCRTKIDCDNLE 523 VH +D+ E S + IL H + +IF TK D L Sbjct 409 --VHVEDS--------EKRSYLLDIL-----------HTLPPEGLTLIFVETKRMADTLT 447 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 Y + F +HGDR ER++ LE F+ G ++ T VA+RG+DI Sbjct 448 DYLLNS---------NFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPN 498 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V +VIN LP + +YVHRIGR GRA G A++ Sbjct 499 VTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAF 533 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+ + + Q ++ + PT +Q SIP++ G D++ A+TGSGKT F P++ + Sbjct 171 FTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSL 230 Query 64 VYE 66 ++ Sbjct 231 AFD 233 >sp|A3LRW2|DBP3_PICST ATP-dependent RNA helicase DBP3 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP3 PE=3 SV=1 Length=526 Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 104/336 (31%), Positives = 158/336 (47%), Gaps = 53/336 (16%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L + P+RELA Q +N+ N ++ + + GGV DQ+ L+N ++VV TPGR Sbjct 189 LCISPTRELASQIYDNLVDL---TSNTNVKCVCVYGGVPKHDQVKNLKNA-NVVVATPGR 244 Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT 409 L DL+ G +NL V +LVLDEAD +L G+ D I + + + Q ++ +AT Sbjct 245 LLDLIEDGAVNLGTVDYLVLDEADRMLETGFEDAIKAIIGGTKK-----ENRQTLMFTAT 299 Query 410 LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 +V+KL+ M+ P V + D + N + ++ E + Sbjct 300 WPQ-EVRKLASTFMNQPVKVSIGDRDELA---------ANKRITQIVEVI---------- 339 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ 529 E + + K+L G K D+ +IF K + +E Sbjct 340 -------------EPFDKEKKLL-GLLRQYQSGSKKNDKVLIFALYKKEATRIEGLL--- 382 Query 530 GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN 589 + + ++ +HGD +R L FKKG+ L+ TDVAARG+DI V VIN Sbjct 383 ------RRNSYNVAAIHGDLSQQQRTNALNSFKKGESSLLLATDVAARGLDIPNVKVVIN 436 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +T P ++YVHRIGR GRA + G A +L TE EK Sbjct 437 LTFPLTVEDYVHRIGRTGRAGQTGTAHTLF-TEHEK 471 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++ + +I+ V + + PT IQ+ + P +L G DV+ AETGSGKT AF +P Sbjct 117 LLSFDQIQLNSKISAVVNK--FPTPTPIQSVAWPYLLSGKDVIGVAETGSGKTFAFGVPA 174 Query 61 I 61 I Sbjct 175 I 175 >sp|Q5APT8|DBP3_CANAL ATP-dependent RNA helicase DBP3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP3 PE=3 SV=1 Length=564 Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 104/336 (31%), Positives = 165/336 (49%), Gaps = 53/336 (16%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L + P+RELA Q +N+ + + + + + GGV+ DQ+ ++ ++VV TPGR Sbjct 227 LCISPTRELALQIYDNLIELTA---DSGVNCVAVYGGVSKDDQIRKIKTA-NVVVATPGR 282 Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT 409 L DL++ G +NL +V +LVLDEAD +L +G+ + I I TS+ +R Q ++ +AT Sbjct 283 LVDLINDGAINLGKVNYLVLDEADRMLEKGFEEDIK----TIISNTSNSER-QTLMFTAT 337 Query 410 LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 +V++L+ M+ P V + D + N + ++ E + K Sbjct 338 WPK-EVRELANNFMNSPVKVTVGDRDELS---------ANKRITQVVEVINKF------- 380 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ 529 + + I++L+ A E ++ +IF K + +E + Sbjct 381 -------------DKEKKLIQLLRKYNA----NESSDNKILIFALYKKEASRIENFL--- 420 Query 530 GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN 589 K ++FS +HGD +R L FK G L+ TDVAARG+DI V VIN Sbjct 421 ------KRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVIN 474 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +T P ++YVHRIGR GRA G A +L TE EK Sbjct 475 LTFPLTIEDYVHRIGRTGRAGAKGTAHTLF-TEDEK 509 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/67 (39%), Positives = 38/67 (57%), Gaps = 2/67 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++ + I + + D PT IQ+ S P +L G DV+ AETGSGKT AF +P Sbjct 154 ILSFDQVQLTSAITSKLSKFDK--PTPIQSVSWPFLLSGKDVIGVAETGSGKTFAFGVPA 211 Query 61 IQIVYET 67 I + T Sbjct 212 INNIITT 218 >sp|Q95YF3|CGH1_CAEEL ATP-dependent RNA helicase cgh-1 OS=Caenorhabditis elegans OX=6239 GN=cgh-1 PE=1 SV=1 Length=430 Score = 134 bits (338), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/337 (29%), Positives = 156/337 (46%), Gaps = 60/337 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +A+++ P+RELA QT + K+I +L+ ++ GG RD + L V +V+ Sbjct 111 AIQAMVIVPTRELALQTSQICVELSKHI---QLKVMVTTGGTDLRDDIMRLNGTVHLVIA 167 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ DL+ G + + LVLDEAD LLSQ + ++R+ N +P K QV++ Sbjct 168 TPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLP------KERQVML 221 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT + V +K MH P ++L E ++ + V K Sbjct 222 YSATFPN-TVTSFMQKHMHKPYEINLMEELTLLGVTQYYAF-VQEK-------------- 265 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 VH + ++ +++Q+IIFC + + L + Sbjct 266 -QKVHCLNT-------------------------LFRKLQINQSIIFCNSTQRVELLAKK 299 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G +SC +H + R + F++G+ R L+C+D+ RGIDI V Sbjct 300 ITEIG---------YSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVN 350 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 VIN P + Y+HRIGR GR +G+AI+L+ E Sbjct 351 VVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYE 387 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/69 (38%), Positives = 39/69 (57%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + ++ + E W P+ IQ SI + L G D+L A+ G+GKTGA+ IPVI+ Sbjct 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104 Query 64 VYETLKDQQ 72 + LK Q Sbjct 105 IQPALKAIQ 113 >sp|Q40468|IF415_TOBAC Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 134 bits (337), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 102/359 (28%), Positives = 167/359 (47%), Gaps = 65/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L +GV +VVGTP Sbjct 110 QALVLAPTRELAQQIEKVMRALGDYL---GVKVTACVGGTSVREDQRILSSGVHVVVGTP 166 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 167 GRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 220 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K ++ + + V V+ Sbjct 221 ATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVD------------------ 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 262 --------------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 295 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 296 -----TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 350 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + YN ++E Sbjct 351 VINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDI-----QRFYNVVIEE 404 Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI- 61 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++ Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100 Query 62 QIVYETLKDQ 71 Q+ YE L+ Q Sbjct 101 QLAYELLECQ 110 >sp|A8G828|RHLB_SERP5 ATP-dependent RNA helicase RhlB OS=Serratia proteamaculans (strain 568) OX=399741 GN=rhlB PE=3 SV=1 Length=428 Score = 134 bits (338), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 165/339 (49%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + + L+ L GG QL VLE+GVDI+V Sbjct 83 NQPRALIMAPTRELAVQIHSDAEALSQ---STGLKMGLAYGGDGYDKQLKVLESGVDILV 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D ++L ++ +VLDEAD + G+ I + ++P V +RL ++ Sbjct 140 GTTGRLIDYAKQNYIDLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPAVD---QRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S+ V++L+ + M+ +V+++ E + + P N + RL + L Sbjct 197 F-SATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+ IIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRCIIFANTKHRCEDVW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G H+ L GD +R + L+ F KG++ L+ TDVAARG+ I Sbjct 274 GHLAADG-------HRVGL--LTGDVAQKKRLRILDDFTKGNLDILVATDVAARGLHIPL 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEE 363 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS+ + P + +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVLEALEKKGFQHCTPIQALALPLTLSGRDVAGQAQTGTGKTLAF 63 >sp|Q54KG1|DDX41_DICDI Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium discoideum OX=44689 GN=ddx41 PE=1 SV=1 Length=671 Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/341 (28%), Positives = 161/341 (47%), Gaps = 67/341 (20%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYID----NPKLRELLIIGGVAARDQLSVLENGVD 341 P LI+ PSRELA QT + + F + +P+LR LL IGG+ R+Q + + GV Sbjct 298 GPFGLILCPSRELARQTYDLVNSFTNALHKNGGHPQLRTLLAIGGIDLREQEHIFKKGVH 357 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 +++ TPGRL DL++ K+N ++L LDEAD L+ G+ D I + + + Sbjct 358 MIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLGFEDDIRSVLDNF------TNQR 411 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 Q ++ SAT+ +KI F +V+PV R G Sbjct 412 QTLLFSATM--------PKKIQEFARSA--------------LVLPVEVNVGRA----GA 445 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE---HKMDQAIIFCRTKID 518 +++ ++ ++ +K E + + E +IFC K D Sbjct 446 ANLNV-------------------TQEVEFVKPEAKIVYLLECLQKTPPPVLIFCENKKD 486 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D++ +Y + + Q V +HGD+ ER+ ++ F++G L+ TDVA++G Sbjct 487 VDDIYEYLLLK---------QVEAVSIHGDKSQDERESAIKAFREGKKDVLVATDVASKG 537 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +D + +VIN +P E +NY+HRIGR GR G+A + + Sbjct 538 LDFPEIQHVINFDMPREIENYIHRIGRTGRRGNKGVATTFI 578 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 36/66 (55%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F EM + + + E P+ IQ + +P+IL G D++ A TGSGKT F++P+ Sbjct 221 ITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPM 280 Query 61 IQIVYE 66 + E Sbjct 281 VLFALE 286 >sp|Q4WP13|DED1_ASPFU ATP-dependent RNA helicase ded1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=ded1 PE=3 SV=1 Length=674 Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/340 (29%), Positives = 151/340 (44%), Gaps = 70/340 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + ++F +R ++ GG QL +E G D++V T Sbjct 276 PTSLILAPTRELVSQIFDEARKFAY---RSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 332 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++LVLDEAD +L G+ I R+ +P V Q + Sbjct 333 PGRLVDLIERGRISLVNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPNVNER----QTL 388 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL----- 459 + SAT FP + + D + D V V V ++ + +++ Sbjct 389 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVED 433 Query 460 -GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K + D +H + +IF TK Sbjct 434 HDKRSVLLDILHTHGTS-------------------------------GLTLIFVETKRM 462 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L + + Q +F +HGDR ER++ LE F+ G L+ T VAARG Sbjct 463 ADALSDFLLNQ---------RFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARG 513 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +DI V +VIN LP + +YVHRIGR GRA G+A + Sbjct 514 LDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF 553 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 30/43 (70%), Gaps = 0/43 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 PT +Q SIP+++ G D++ A+TGSGKTG F P++ ++T Sbjct 211 PTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAFQT 253 >sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens OX=9606 GN=DDX17 PE=1 SV=2 Length=729 Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 161/334 (48%), Gaps = 55/334 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA+Q + K +L+ I GG Q+ LE GV+I + Sbjct 243 DGPICLVLAPTRELAQQVQQVADDYGKC---SRLKSTCIYGGAPKGPQIRDLERGVEICI 299 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + +GK NL + +LVLDEAD +L G+ I ++ +QI Q + Sbjct 300 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 353 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V++L+E + T +++ ++ + +H ++ + D E Sbjct 354 MWSATWPK-EVRQLAEDFLRDYTQINV---GNLELSANHNILQI---VDVCME------- 399 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 KD+ K+++ + A KE+K IIF TK CD+L + Sbjct 400 -----SEKDH---------------KLIQLMEEIMAEKENK---TIIFVETKRRCDDLTR 436 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G + +C+HGD+ ER L F+ G LI TDVA+RG+D+ V Sbjct 437 RMRRDG---------WPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDV 487 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VIN P+ ++YVHRIGR R+ G A + Sbjct 488 KFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTF 521 Score = 41.2 bits (95), Expect = 0.038, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 25/37 (68%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQ + PL L G D++ A+TGSGKT A+ +P I Sbjct 194 PTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI 230 >sp|Q8EJQ5|RHLB_SHEON ATP-dependent RNA helicase RhlB OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=rhlB PE=3 SV=1 Length=439 Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/339 (31%), Positives = 163/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ +L+ ++ GG + Q VL+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDAILLAKHT---RLKVGIVYGGESYDVQRKVLDQGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G +NL+ ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDIRFLFRRMPNA---DQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S V++L+ M+ P V++ E+ + + P RL L + Sbjct 197 F-SATL-SMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKMRLLLTLIE-- 252 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 E W E +AI+F TK C+NL Sbjct 253 -------------------EDWPE--------------------KAIVFSNTKHSCENLW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + GH+ L GD +R + LE+F +G + L+ TDVAARG+ I Sbjct 274 SWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLHISD 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G+++S E Sbjct 325 VSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|A5UI36|RHLB_HAEIG ATP-dependent RNA helicase RhlB OS=Haemophilus influenzae (strain PittGG) OX=374931 GN=rhlB PE=3 SV=1 Length=415 Score = 134 bits (336), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/336 (31%), Positives = 165/336 (49%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ALI+ P+RELA Q N+ + K L+ L GG QL V+E GVDI++GT Sbjct 84 PRALILAPTRELAVQISNDAEFLAK---ASGLKTALAYGGDGYDKQLQVIECGVDILIGT 140 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D V G + L +++ +VLDEAD + G FI + + + + RL ++ Sbjct 141 TGRVIDYVKQGVIGLDEIQVVVLDEADRMFDLG---FIRDIRYLLRKCPAPQARLTMLF- 196 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M+ P +++++ E T H + Sbjct 197 SATL-SYKVRELAFEDMNDPEYIEIEPEQK---TGHRI---------------------- 230 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K+ +N +M + + +++ E+ R I +F TK C+ + Y Sbjct 231 -----KEELFYPSNQDKM-ALLLTLMEDEWPERCI---------VFANTKHRCEEIWGYL 275 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 GH+ L GD +R L++F GD+ L+ TDVAARG+ I V + Sbjct 276 A-------ADGHRVGL--LTGDVAQKKRLSLLKQFTDGDLDILVATDVAARGLHISDVTH 326 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LPD++++YVHRIGR GRA G++IS E Sbjct 327 VFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEE 362 Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 32/53 (60%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS + + P + A+ + + T IQA S+P+ L G DV A+TG+GKT AF Sbjct 11 FSALPLHPIVRGALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKTMAF 63 >sp|Q6LLL5|RHLB_PHOPR ATP-dependent RNA helicase RhlB OS=Photobacterium profundum (strain SS9) OX=298386 GN=rhlB PE=3 SV=1 Length=437 Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 109/338 (32%), Positives = 166/338 (49%), Gaps = 57/338 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q N+ + + L+ L GG A Q V GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIYNDAAPL---LASTGLKAGLAYGGEAYEKQQKVFAEGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D ++L+ ++ +VLDEAD + G+ I + ++P + RL ++ Sbjct 140 GTCGRIIDFYKQRVIDLASIQVVVLDEADRMFDLGFIKDIRFLFRRMP---APKARLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SATL S+ VK+L+ + M+ P VVV N KT H+ Sbjct 197 F-SATL-SYRVKELAFEHMNSP---------------ESVVVEPNQKT---------GHL 230 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +++ N E +++L+ I+E D+AIIF TK C+++ Sbjct 231 IQEELFYPSN-----------QEKMRLLQT-----LIEEEWPDRAIIFANTKHRCEDI-- 272 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G H+ L+GD +R + LE+F +GD+ L+ TDVAARG+ I V Sbjct 273 -----WGHLAADNHRVGL--LNGDVPQKKRVRILEQFTQGDIDILVATDVAARGLHIPQV 325 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 326 THVYNYDLPDDAEDYVHRIGRTGRAGESGSSISFACEE 363 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/53 (36%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++G+ P + + ++ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLEPTVLEGLDAQGFHYCTPIQALALPVVLTGQDIAGQAQTGTGKTLAF 63 >sp|A8GZJ0|RHLB_SHEPA ATP-dependent RNA helicase RhlB OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) OX=398579 GN=rhlB PE=3 SV=1 Length=436 Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/338 (31%), Positives = 166/338 (49%), Gaps = 57/338 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ L+ ++ GG Q VL+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDANLLAKHTG---LKVGIVYGGEGYEVQRKVLDKGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G +N+S ++ +VLDEAD + G+ I + ++P D K + Sbjct 140 GTTGRIIDYVRQGVINVSCIQAVVLDEADRMFDLGFIKDIRFLFRRMP----DAKSRLNM 195 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SATL S V++L+ M+ P V+ + N KT + Sbjct 196 LFSATL-SMKVQELAYDHMNEPEKVE---------------IAPNEKTSK---------- 229 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 N + P M E + +L + ++E ++AI+F TK C+ + Sbjct 230 ---------NIKEEIFYPSM-EEKMPLL-----LSLLEEDWPEKAIVFSNTKHSCEKVWS 274 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + GH+ L GD +R + LE+F KGD+ L+ TDVAARG+ I V Sbjct 275 WL-------EGDGHRAGL--LTGDVPQKKRLRILEQFTKGDIDILVATDVAARGLHISDV 325 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA + G+++S E Sbjct 326 SHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEE 363 Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ + E+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKTLAFLVATFNH 70 Query 64 VYET 67 + T Sbjct 71 LLST 74 >sp|A1RFB3|RHLB_SHESW ATP-dependent RNA helicase RhlB OS=Shewanella sp. (strain W3-18-1) OX=351745 GN=rhlB PE=3 SV=1 Length=439 Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/339 (31%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ +L+ ++ GG + Q VL+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDAILLAKHT---RLKVGIVYGGESYDVQRKVLDQGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G ++L+ ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRIIDYVRQGIISLTAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDA---NQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S V++L+ M+ P VD+ ++ + V P RL L + Sbjct 197 F-SATL-SMKVQELAYDHMNDPVKVDIAPDEKTSKNIKEEVFYPSQEDKMRLLLTLIE-- 252 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 E W E +AI+F TK C+NL Sbjct 253 -------------------EDWPE--------------------KAIVFSNTKHSCENLW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + GH+ L GD +R + LE+F G + L+ TDVAARG+ I Sbjct 274 SWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTSGQLDILVATDVAARGLHISD 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G++IS E Sbjct 325 VSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSISFACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|A4YB09|RHLB_SHEPC ATP-dependent RNA helicase RhlB OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) OX=319224 GN=rhlB PE=3 SV=1 Length=439 Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/339 (31%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ +L+ ++ GG + Q VL+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDAILLAKHT---RLKVGIVYGGESYDVQRKVLDQGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G ++L+ ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRIIDYVRQGIISLTAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDA---NQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S V++L+ M+ P VD+ ++ + V P RL L + Sbjct 197 F-SATL-SMKVQELAYDHMNDPVKVDIAPDEKTSKNIKEEVFYPSQEDKMRLLLTLIE-- 252 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 E W E +AI+F TK C+NL Sbjct 253 -------------------EDWPE--------------------KAIVFSNTKHSCENLW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + GH+ L GD +R + LE+F G + L+ TDVAARG+ I Sbjct 274 SWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTSGQLDILVATDVAARGLHISD 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G++IS E Sbjct 325 VSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSISFACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|A8G0U0|RHLB_SHESH ATP-dependent RNA helicase RhlB OS=Shewanella sediminis (strain HAW-EB3) OX=425104 GN=rhlB PE=3 SV=1 Length=435 Score = 134 bits (337), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/338 (31%), Positives = 166/338 (49%), Gaps = 57/338 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q VL+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDADLLAKHTG---LKVGIVYGGESYEVQRKVLDKGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G +N+S ++ +VLDEAD + G+ I + ++P D K + Sbjct 140 GTTGRIIDYVRQGIINVSAIQAVVLDEADRMFDLGFIKDIRFLFRRMP----DAKSRLNM 195 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SATL S V++L+ M+ P V+ + N KT + Sbjct 196 LFSATL-SMKVQELAYDHMNEPEKVE---------------IAPNEKTSK---------- 229 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 N + P M E +++L + ++E D+AI+F TK C+ L Sbjct 230 ---------NIKEEIFYPSM-DEKMRLL-----LTLLEEDWPDKAIVFSNTKHSCEKLWS 274 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + GH+ L GD +R + LE F +G + L+ TDVAARG+ I V Sbjct 275 WL-------EGDGHRVGL--LTGDVPQKKRIRILELFTEGKLDVLVATDVAARGLHISDV 325 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA + G+++S E Sbjct 326 SHVYNYDLPDDCEDYVHRIGRTGRAGKKGVSVSFACEE 363 Score = 40.4 bits (93), Expect = 0.055, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F++ + EI A+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFSLQTEIKTALNESGFEYCTPIQALSLPILLQKKDIAGQAQTGTGKTLAFLV 65 >sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp2 PE=2 SV=2 Length=550 Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/341 (30%), Positives = 156/341 (46%), Gaps = 55/341 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F K + ++R + GGV Q+ L GV+I + Sbjct 194 DGPIVLVLAPTRELAVQIQQECTKFGK---SSRIRNTCVYGGVPRGPQIRDLIRGVEICI 250 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ + K NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 251 ATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIR------PDRQTV 304 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +P V D + D + V ++ L SH Sbjct 305 MFSAT---------------WPKEVQRLARDYLNDYIQVTVGSLD---------LAASHN 340 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 V DN A + E +K + ++ +IF TK D++ + Sbjct 341 IKQIVEVVDNADKRARLGKDIEEVLK-------------DRDNKVLIFTGTKRVADDITR 387 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD+ ER L F+ G ++ TDVA+RGID+ G+ Sbjct 388 -FLRQDGWP--------ALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGI 438 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +V N P ++YVHRIGR GRA G A + ++ K Sbjct 439 THVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAK 479 Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + + V+++ + PT IQ ++ P+ + G D++ + TGSGKT ++ +P Sbjct 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPA 180 Query 61 I 61 I Sbjct 181 I 181 >sp|Q4PHU9|DBP2_USTMA ATP-dependent RNA helicase DBP2 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP2 PE=3 SV=2 Length=552 Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/341 (30%), Positives = 161/341 (47%), Gaps = 56/341 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P ALI+ P+RELA Q +F + +LR + GGV Q+ L+ G +I + Sbjct 202 DGPIALILAPTRELANQIQVECNRFG---GSSRLRTCAVYGGVPKGPQIRDLQRGAEICI 258 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D+V GK NL +V +LV+DEAD +L G+ I ++ QI Q + Sbjct 259 ATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQI------RPDRQTL 312 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V++L+ ++ V++ + + H+V + T+ +E+ GK Sbjct 313 MFSATWPK-EVQRLAGDFLNNYAQVNIGSTELAAN--HNVKQIIEVCTE--FEKKGKLIG 367 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + + A++ + IIF TK D+L + Sbjct 368 HLETISAENG---------------------------------KVIIFTSTKRVADDLTK 394 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F++Q G P + +HGD++ ER L FK G ++ T VA+RG+D+ + Sbjct 395 -FLRQDGWP--------ALAIHGDKQQQERDWVLAEFKSGRSPIMVATAVASRGLDVKDI 445 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 YVIN P ++YVH+IGR GRA R G A + E K Sbjct 446 SYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSK 486 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G I +++M + P+ IQ+++ P+ L G D++ AETGSGKT F++P Sbjct 129 VTSFDEAGFPDYILSEIKKMGFSEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPA 188 Query 61 I 61 + Sbjct 189 M 189 >sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP2 PE=3 SV=1 Length=540 Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 105/343 (31%), Positives = 165/343 (48%), Gaps = 60/343 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q +F + + ++R I GG Q+ L+ GV+I V Sbjct 182 DGPIVLILAPTRELAVQIQTEATKFGQ---SSRIRNTAIYGGAPKGPQIRDLQRGVEICV 238 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ TGK NL +V +LV+DEAD +L G+ I ++ + Q+ D Q + Sbjct 239 ATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKI---VSQIRPDR---QTL 292 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK--S 462 + SAT +V++L+ +H V++ D + H+V V TD +++ K S Sbjct 293 LFSATWPK-EVQRLAMDFLHDFIQVNIGSLDLTAN--HNVAQHVEVCTD--FDKRSKLLS 347 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 H+ E I G + +IF TK D+L Sbjct 348 HL----------------------EKISQENG-------------KVLIFVATKRVADDL 372 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + F++ G P + +HGD++ ER L FK G ++ TDVA+RG+D+ Sbjct 373 TK-FLRMDGWP--------ALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVR 423 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + YVIN P+ ++Y+HRIGR GRA R G + + + K Sbjct 424 DIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSK 466 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G I + M + P+ IQ ++ P+ L G D++ AETGSGKT +F +P Sbjct 109 ITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPA 168 Query 61 I 61 + Sbjct 169 M 169 >sp|P0CQ77|DBP2_CRYNB ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP2 PE=3 SV=1 Length=540 Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 105/343 (31%), Positives = 165/343 (48%), Gaps = 60/343 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q +F + + ++R I GG Q+ L+ GV+I V Sbjct 182 DGPIVLILAPTRELAVQIQTEATKFGQ---SSRIRNTAIYGGAPKGPQIRDLQRGVEICV 238 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ TGK NL +V +LV+DEAD +L G+ I ++ + Q+ D Q + Sbjct 239 ATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKI---VSQIRPDR---QTL 292 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK--S 462 + SAT +V++L+ +H V++ D + H+V V TD +++ K S Sbjct 293 LFSATWPK-EVQRLAMDFLHDFIQVNIGSLDLTAN--HNVAQHVEVCTD--FDKRSKLLS 347 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 H+ E I G + +IF TK D+L Sbjct 348 HL----------------------EKISQENG-------------KVLIFVATKRVADDL 372 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + F++ G P + +HGD++ ER L FK G ++ TDVA+RG+D+ Sbjct 373 TK-FLRMDGWP--------ALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVR 423 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + YVIN P+ ++Y+HRIGR GRA R G + + + K Sbjct 424 DIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSK 466 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G I + M + P+ IQ ++ P+ L G D++ AETGSGKT +F +P Sbjct 109 ITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPA 168 Query 61 I 61 + Sbjct 169 M 169 >sp|Q02748|IF4A_DROME Eukaryotic initiation factor 4A OS=Drosophila melanogaster OX=7227 GN=eIF4A PE=1 SV=3 Length=403 Score = 132 bits (333), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 107/348 (31%), Positives = 167/348 (48%), Gaps = 64/348 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + +Y+ K+ IGG R+ +LE+G +VVGTP Sbjct 100 QALILAPTRELATQIQRVVMALGEYM---KVHSHACIGGTNVREDARILESGCHVVVGTP 156 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D+++ L ++ VLDEAD +LS+G+ D I + +P +QVI+ S Sbjct 157 GRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLP------PDVQVILLS 210 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ DV ++S M P + +K E+ + + V V + W +LG Sbjct 211 ATMPP-DVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQEN---W-KLGT------ 259 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 L Y +I Q++IFC T+ D L Q Sbjct 260 ------------------------LCDLYDTLSIT-----QSVIFCNTRRKVDQLTQ--- 287 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + H F+ +HGD + +R+ +++F+ G R LI TD+ ARGID+ V V Sbjct 288 ------EMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLV 341 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV------WYH 629 IN LP ++NY+HRIGR GR R G+AI+ + + ++ +YH Sbjct 342 INYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYH 389 Score = 40.4 bits (93), Expect = 0.058, Method: Compositional matrix adjust. Identities = 20/69 (29%), Positives = 40/69 (58%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + E+ + + + P+ IQ +I + G DV+ A++G+GKT FSI ++Q Sbjct 32 FDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQ 91 Query 64 VYETLKDQQ 72 + ++++ Q Sbjct 92 IDTSIRECQ 100 >sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=PRP5 PE=3 SV=2 Length=1207 Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/346 (29%), Positives = 163/346 (47%), Gaps = 64/346 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q + K F K + LR + GG R+Q++ L+ G +I+V Sbjct 649 DGPIGLIMTPTRELAVQIHKDCKPFLKMMG---LRAVCAYGGAPIREQIAELKRGAEIIV 705 Query 345 GTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM-HNQIPQVTSDGKR 400 TPGR+ DL++ + NL +V ++VLDEAD + G+ + ++ N P Sbjct 706 CTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMRPD------- 758 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV-VPVNP-KTDRLWER 458 Q I+ SAT+ + L++K++ P V + G V + +V V P K R+ E Sbjct 759 RQTILFSATMPRI-IDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLEL 817 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 LG+ + R +D + +IF + Sbjct 818 LGELYDRDEDA--------------------------------------RTLIFVERQEK 839 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D+L + + +G + C+ +HG + +R + FKKG V LI T VAARG Sbjct 840 ADDLLKELMMKG---------YPCMSIHGGKDQIDRDSTISDFKKGVVPILIATSVAARG 890 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +D+ + VIN P+ ++YVHR GR GRA G+A++ V E+E Sbjct 891 LDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQE 936 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/68 (34%), Positives = 42/68 (62%), Gaps = 4/68 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +++ G+ + V+ + + PT IQ +++P ++ G DV+ A+TGSGKT AF +P Sbjct 579 WAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLP---- 634 Query 64 VYETLKDQ 71 ++ +KDQ Sbjct 635 MFRHIKDQ 642 >sp|Q9BQ39|DDX50_HUMAN ATP-dependent RNA helicase DDX50 OS=Homo sapiens OX=9606 GN=DDX50 PE=1 SV=1 Length=737 Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 165/334 (49%), Gaps = 58/334 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 +PK L++ P+RELA Q + K + KL GG + + Q++ + NG+DI+VG Sbjct 211 SPKVLVLAPTRELANQVAKDFKDITR-----KLSVACFYGGTSYQSQINHIRNGIDILVG 265 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + +G+L+LS++R +VLDE D +L G+++ + + ++ + S+ Q ++ Sbjct 266 TPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDN-PQTLL 324 Query 406 CSATLHSFDVKKLSEKIMHFP-TWVDLKGE--DSVPDTVHHVVVPVNPKTDRLWERLGKS 462 SAT + V K+++K M VDL G+ TV H+ + + W Sbjct 325 FSATCPQW-VYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCH------W------ 371 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + P + + +++ G +AIIFC TK + + Sbjct 372 ----------------SQRPAVIGDVLQVYSGSEG----------RAIIFCETKKNVTEM 405 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 P K + CLHGD +R+ L+ F++G + L+ T+VAARG+DI Sbjct 406 -------AMNPHIKQN---AQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP 455 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 V VI + P + ++Y+HR GR GRA R G+ I Sbjct 456 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICI 489 Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 45/79 (57%), Gaps = 7/79 (9%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 AFS + E + ++ + +L P IQ ++ + G D++ A TG+GKT +F+IP+ Sbjct 138 AFSNFPISEETIKLLKGRGVTYLFP--IQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPL 195 Query 61 IQIVYETLKDQQEGKKGKT 79 I+ + ++Q+ KK ++ Sbjct 196 IERLQ---RNQETIKKSRS 211 >sp|C3LQR1|RHLB_VIBCM ATP-dependent RNA helicase RhlB OS=Vibrio cholerae serotype O1 (strain M66-2) OX=579112 GN=rhlB PE=3 SV=1 Length=438 Score = 133 bits (334), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 112/337 (33%), Positives = 165/337 (49%), Gaps = 59/337 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I+ P+RELA Q N+ + + + L+ L GG + QL+ L++GVDI++GT Sbjct 85 PRAIIMAPTRELAIQIFNDAEPL---LASTGLKAALAYGGESYDKQLAKLQSGVDILIGT 141 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D NL+ ++ +VLDEAD + G+ I + ++P+ RL ++ Sbjct 142 TGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKD---RLNMLF- 197 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT-DRLWERLGKSHIR 465 SATL S+ V++L+ + M+ P HVVV KT R+ E L Sbjct 198 SATL-SYRVQELAFEHMNNP---------------EHVVVEPEQKTGHRIQEELFYP--- 238 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 S E ++ L I+E D+AIIF TK C EQ Sbjct 239 ---------------SNEHKMALLQTL--------IEEEWPDRAIIFANTKHRC---EQI 272 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + + G L GD +R++ LE+F +GDV L+ TDVAARG+ I V Sbjct 273 WAHLAADNHRVG------LLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQVT 326 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 327 HVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEE 363 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F++ G+ P++ +E+ ++ T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAF 63 >sp|Q9KV52|RHLB_VIBCH ATP-dependent RNA helicase RhlB OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=rhlB PE=3 SV=1 Length=438 Score = 133 bits (334), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 112/337 (33%), Positives = 165/337 (49%), Gaps = 59/337 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I+ P+RELA Q N+ + + + L+ L GG + QL+ L++GVDI++GT Sbjct 85 PRAIIMAPTRELAIQIFNDAEPL---LASTGLKAALAYGGESYDKQLAKLQSGVDILIGT 141 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D NL+ ++ +VLDEAD + G+ I + ++P+ RL ++ Sbjct 142 TGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKD---RLNMLF- 197 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT-DRLWERLGKSHIR 465 SATL S+ V++L+ + M+ P HVVV KT R+ E L Sbjct 198 SATL-SYRVQELAFEHMNNP---------------EHVVVEPEQKTGHRIQEELFYP--- 238 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 S E ++ L I+E D+AIIF TK C EQ Sbjct 239 ---------------SNEHKMALLQTL--------IEEEWPDRAIIFANTKHRC---EQI 272 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + + G L GD +R++ LE+F +GDV L+ TDVAARG+ I V Sbjct 273 WAHLAADNHRVG------LLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQVT 326 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 327 HVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEE 363 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F++ G+ P++ +E+ ++ T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAF 63 >sp|A5F3R4|RHLB_VIBC3 ATP-dependent RNA helicase RhlB OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=rhlB PE=3 SV=1 Length=438 Score = 133 bits (334), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 112/337 (33%), Positives = 165/337 (49%), Gaps = 59/337 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I+ P+RELA Q N+ + + + L+ L GG + QL+ L++GVDI++GT Sbjct 85 PRAIIMAPTRELAIQIFNDAEPL---LASTGLKAALAYGGESYDKQLAKLQSGVDILIGT 141 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D NL+ ++ +VLDEAD + G+ I + ++P+ RL ++ Sbjct 142 TGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKD---RLNMLF- 197 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT-DRLWERLGKSHIR 465 SATL S+ V++L+ + M+ P HVVV KT R+ E L Sbjct 198 SATL-SYRVQELAFEHMNNP---------------EHVVVEPEQKTGHRIQEELFYP--- 238 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 S E ++ L I+E D+AIIF TK C EQ Sbjct 239 ---------------SNEHKMALLQTL--------IEEEWPDRAIIFANTKHRC---EQI 272 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + + G L GD +R++ LE+F +GDV L+ TDVAARG+ I V Sbjct 273 WAHLAADNHRVG------LLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQVT 326 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 327 HVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEE 363 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F++ G+ P++ +E+ ++ T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAF 63 >sp|Q4L7W0|CSHA_STAHJ DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=cshA PE=3 SV=1 Length=503 Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 161/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QALILAPTRELAMQVAEQLREFSR---GQNVQVVTVFGGMPIDRQIKALKRGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + + L+LDEAD +++ G+ D + + ++IP ++ Q ++ S Sbjct 128 GRVIDHLNRRTLKTNGIHTLILDEADEMMNMGFIDDMRFIMDKIP-----AEQRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDT-VHHVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P V + E S P ++ +V K D L Sbjct 183 ATMPKA-IQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LLSKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/64 (47%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + + +E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDKTVETLEAMGFKEPTPIQKDSIPYTLEGKDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|P0CQ70|IF4A_CRYNJ ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=TIF1 PE=3 SV=1 Length=401 Score = 132 bits (332), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/358 (30%), Positives = 168/358 (47%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q + Y++ + +GG A R+ ++ L G IVVGTP Sbjct 98 QALVLAPTRELAQQIQKVVIALGDYLN---VDCHACVGGTAVREDIARLNEGPHIVVGTP 154 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D+++ G L V LDEAD +LS G+ + I + +P T QV++ S Sbjct 155 GRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESIYEIFQLLPGET------QVVLLS 208 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +V +++K M P + +K ++ + + + V Sbjct 209 ATMAP-EVLDVTKKFMRDPIRILVKKDELTLEGIRQFYINV------------------- 248 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W K E + + QA+IFC T+ D L Q Sbjct 249 -------------EKEEW-------KLETLCDLYETVTITQAVIFCSTRRKVDWLTQQL- 287 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 QF+ +HGD K ER+ ++ F+ G R LI TD+ ARGID+ V V Sbjct 288 --------HDRQFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLV 339 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP K+NY+HRIGR GR R G+AI+ V+ E + + + + YNT+++E Sbjct 340 INYDLPSSKENYIHRIGRGGRFGRKGVAINFVSNEDKNMLEEI-----ETYYNTQVEE 392 Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 39/69 (57%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + E+ + + + P+ IQ +I I+ G D + A++G+GKT FS+ ++Q Sbjct 30 FDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQR 89 Query 64 VYETLKDQQ 72 + T+K Q Sbjct 90 IDTTVKKTQ 98 >sp|P0CQ71|IF4A_CRYNB ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=TIF1 PE=3 SV=1 Length=401 Score = 132 bits (332), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/358 (30%), Positives = 168/358 (47%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q + Y++ + +GG A R+ ++ L G IVVGTP Sbjct 98 QALVLAPTRELAQQIQKVVIALGDYLN---VDCHACVGGTAVREDIARLNEGPHIVVGTP 154 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D+++ G L V LDEAD +LS G+ + I + +P T QV++ S Sbjct 155 GRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESIYEIFQLLPGET------QVVLLS 208 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +V +++K M P + +K ++ + + + V Sbjct 209 ATMAP-EVLDVTKKFMRDPIRILVKKDELTLEGIRQFYINV------------------- 248 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W K E + + QA+IFC T+ D L Q Sbjct 249 -------------EKEEW-------KLETLCDLYETVTITQAVIFCSTRRKVDWLTQQL- 287 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 QF+ +HGD K ER+ ++ F+ G R LI TD+ ARGID+ V V Sbjct 288 --------HDRQFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLV 339 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP K+NY+HRIGR GR R G+AI+ V+ E + + + + YNT+++E Sbjct 340 INYDLPSSKENYIHRIGRGGRFGRKGVAINFVSNEDKNMLEEI-----ETYYNTQVEE 392 Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 39/69 (57%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + E+ + + + P+ IQ +I I+ G D + A++G+GKT FS+ ++Q Sbjct 30 FDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQR 89 Query 64 VYETLKDQQ 72 + T+K Q Sbjct 90 IDTTVKKTQ 98 >sp|Q58083|H669_METJA Probable ATP-dependent RNA helicase MJ0669 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0669 PE=1 SV=1 Length=367 Score = 131 bits (330), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/346 (29%), Positives = 164/346 (47%), Gaps = 65/346 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +A+I+ P+RELA Q + I+ K N L+ I GG A Q+ L+N +IVV Sbjct 73 NGIEAIILTPTRELAIQVADEIESLK---GNKNLKIAKIYGGKAIYPQIKALKNA-NIVV 128 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ D ++ G LNL V++ +LDEAD +L+ G+ + ++ N + K +++ Sbjct 129 GTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKILN------ACNKDKRIL 182 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ ++ L++K M +++ K ++ + V Sbjct 183 LFSATMPR-EILNLAKKYMGDYSFIKAKINANIEQSYVEV-------------------- 221 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 N E + ++LK +K ++FC+TK D L Sbjct 222 ---------------NENERFEALCRLLK----------NKEFYGLVFCKTKRDTKELAS 256 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G F +HGD +R++ + FK+ +R LI TDV +RGID++ + Sbjct 257 MLRDIG---------FKAGAIHGDLSQSQREKVIRLFKQKKIRILIATDVMSRGIDVNDL 307 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VIN LP ++Y+HRIGR GRA + G AIS++ + K ++ Sbjct 308 NCVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRREYKKLRYI 353 Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 40/65 (62%), Gaps = 1/65 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPVIQ 62 F+E+ + I A+ + PTDIQ + IPL L +++ A TGSGKT +F+IP+I+ Sbjct 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 67 Query 63 IVYET 67 +V E Sbjct 68 LVNEN 72 >sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0301200 PE=2 SV=1 Length=512 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 103/341 (30%), Positives = 165/341 (48%), Gaps = 60/341 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ L++ P+RELA+Q + + + + + + GG + Q+S L++GVDIV+GT Sbjct 168 PRVLVLSPTRELAQQIADVLCEAGAPCG---ISSVCLYGGTSKGPQISALKSGVDIVIGT 224 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL+ G L+ V F+VLDEAD +L G+ + + +Q V Q ++ Sbjct 225 PGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVR------QTVMF 278 Query 407 SATLHSFDVKKLSEKIMH-FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT V +L+++ M P V + ED + H V+ V DR Sbjct 279 SATWPPA-VHQLAQEFMDPNPIKVVIGSEDLAAN--HDVMQIVEVLDDR----------- 324 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM--DQAIIFCRTKIDCDNLE 523 ++D S + +L K HK ++ ++F K + +E Sbjct 325 -----SRD------------SRLVALLD--------KYHKAQRNRVLVFVLYKREATRVE 359 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 ++G +S V +HGD+ H+R + L FK+G +I TDVA+RG+DI Sbjct 360 TMLQRRG---------WSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPD 410 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V VIN + P ++YVHRIGR GRA + G+A + E + Sbjct 411 VEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENK 451 Score = 40.0 bits (92), Expect = 0.075, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 42/77 (55%), Gaps = 3/77 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F+ + P++ + + P+ IQA + P +L G D + A TGSGKT AF +P Sbjct 93 LSSFAATALPPQVLDCCKGFER--PSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPA 150 Query 61 IQIVYETLKDQQEGKKG 77 + V + ++ KKG Sbjct 151 LMHVRRKM-GEKSAKKG 166 >sp|Q6Z2Z4|IF4A3_ORYSJ Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0146600 PE=1 SV=1 Length=414 Score = 132 bits (333), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 101/359 (28%), Positives = 166/359 (46%), Gaps = 65/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++L++ P+RELA+Q ++ Y+ ++ +GG + R+ +L +GV +VVGTP Sbjct 111 QSLVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILASGVHVVVGTP 167 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 168 GRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 221 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K ++ + + V V Sbjct 222 ATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEK----------------- 263 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W + L Y AI Q++IF T+ D L Sbjct 264 ---------------EDWK--LDTLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 296 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 297 -----TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 351 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + + YN ++E Sbjct 352 VINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI-----QRFYNVTIEE 405 Score = 34.7 bits (78), Expect = 3.4, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 31/60 (52%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101 >sp|P17844|DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens OX=9606 GN=DDX5 PE=1 SV=1 Length=614 Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 100/338 (30%), Positives = 156/338 (46%), Gaps = 63/338 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFK-KYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 + P L++ P+RELA+Q ++Q +Y +L+ I GG Q+ LE GV+I Sbjct 166 DGPICLVLAPTRELAQQ----VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEIC 221 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 + TPGRL D + GK NL + +LVLDEAD +L G+ I ++ + Q+ D Q Sbjct 222 IATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKI---VDQIRPD---RQT 275 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT +P V ED + D +H + + L +H Sbjct 276 LMWSAT---------------WPKEVRQLAEDFLKDYIHINIGALE---------LSANH 311 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE---HKMDQAIIFCRTKIDCD 520 N ++ + K E +R ++E K ++ I+F TK CD Sbjct 312 ----------------NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD 355 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + + G + + +HGD+ ER L FK G LI TDVA+RG+D Sbjct 356 ELTRKMRRDG---------WPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLD 406 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 407 VEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444 Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P I Sbjct 96 FYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153 >sp|Q7A0D2|CSHA_STAAW DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain MW2) OX=196620 GN=cshA PE=3 SV=1 Length=506 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 159/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP V + Q ++ S Sbjct 128 GRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV-----QRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P + + E S P + +V K D L Sbjct 183 ATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|Q6G7M9|CSHA_STAAS DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=cshA PE=3 SV=1 Length=506 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 159/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP V + Q ++ S Sbjct 128 GRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV-----QRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P + + E S P + +V K D L Sbjct 183 ATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|Q7A4G0|CSHA_STAAN DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain N315) OX=158879 GN=cshA PE=1 SV=1 Length=506 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 159/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP V + Q ++ S Sbjct 128 GRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV-----QRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P + + E S P + +V K D L Sbjct 183 ATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|Q99SH6|CSHA_STAAM DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=cshA PE=1 SV=1 Length=506 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 159/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP V + Q ++ S Sbjct 128 GRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV-----QRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P + + E S P + +V K D L Sbjct 183 ATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|Q5HEB9|CSHA_STAAC DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain COL) OX=93062 GN=cshA PE=3 SV=1 Length=506 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 159/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP V + Q ++ S Sbjct 128 GRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV-----QRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P + + E S P + +V K D L Sbjct 183 ATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|Q2FWH5|CSHA_STAA8 DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=cshA PE=1 SV=1 Length=506 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 159/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP V + Q ++ S Sbjct 128 GRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV-----QRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P + + E S P + +V K D L Sbjct 183 ATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|Q2FF45|CSHA_STAA3 DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain USA300) OX=367830 GN=cshA PE=3 SV=1 Length=506 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 159/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP V + Q ++ S Sbjct 128 GRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV-----QRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P + + E S P + +V K D L Sbjct 183 ATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|Q6GEZ3|CSHA_STAAR DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=cshA PE=3 SV=1 Length=506 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 159/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP V + Q ++ S Sbjct 128 GRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV-----QRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P + + E S P + +V K D L Sbjct 183 ATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|Q40471|IF4A9_TOBAC Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 132 bits (332), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 101/359 (28%), Positives = 168/359 (47%), Gaps = 65/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L +GV +VVGTP Sbjct 110 QALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILSSGVHVVVGTP 166 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 167 GRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 220 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K ++ + + V V+ Sbjct 221 ATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVD------------------ 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 262 --------------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 295 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 296 -----TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 350 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP + +NY+HRIGR GR R G++I+ V ++ E++ + + YN ++E Sbjct 351 VINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTSDDERMLSDI-----QRFYNVVIEE 404 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI- 61 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++ Sbjct 41 SFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100 Query 62 QIVYETLKDQ 71 Q+ YE L Q Sbjct 101 QLDYELLDCQ 110 >sp|Q25225|IF4A_LEIBR Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis OX=5660 GN=LbrM01_V2.0740 PE=3 SV=2 Length=403 Score = 132 bits (332), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 113/364 (31%), Positives = 174/364 (48%), Gaps = 61/364 (17%) Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD 341 F N + L++ P+RELA QT I + +++ N +GG +D L L+ GV Sbjct 90 FRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCETFVGGTRVQDDLRKLQAGVV 149 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 + VGTPGR+ D++ G L +R LVLDEAD +LSQG++D I + +P K + Sbjct 150 VAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLP------KDI 203 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 QV + SAT+ +V +L++K M P + +K E E + + Sbjct 204 QVALFSATMPE-EVLELTKKFMRDPVRILVKRESLT------------------LEGIKQ 244 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 I ++ H D L Y +I Q++IF T+ D Sbjct 245 FFIAVEEEHKLDT-----------------LMDLYETVSIA-----QSVIFANTRRKVDW 282 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + ++ H S +H + +R++ + F+ G R L+ TD+ ARGID+ Sbjct 283 IAEKL-------NQSNHTVS--SMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDV 333 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 H V VIN LP K+NY+HRIGR GR R G+AI+ V TEK+ H +G Y+T Sbjct 334 HHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFV-TEKDVELLHEI----EGHYHT 388 Query 642 RLKE 645 ++ E Sbjct 389 QIDE 392 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQ 62 +Q Sbjct 85 LQ 86 >sp|Q61656|DDX5_MOUSE Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2 Length=614 Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/338 (30%), Positives = 156/338 (46%), Gaps = 63/338 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFK-KYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 + P L++ P+RELA+Q ++Q +Y +L+ I GG Q+ LE GV+I Sbjct 166 DGPICLVLAPTRELAQQ----VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEIC 221 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 + TPGRL D + GK NL + +LVLDEAD +L G+ I ++ + Q+ D Q Sbjct 222 IATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKI---VDQIRPD---RQT 275 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT +P V ED + D +H + + L +H Sbjct 276 LMWSAT---------------WPKEVRQLAEDFLKDYIHINIGALE---------LSANH 311 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE---HKMDQAIIFCRTKIDCD 520 N ++ + K E +R ++E K ++ I+F TK CD Sbjct 312 ----------------NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD 355 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + + G + + +HGD+ ER L FK G LI TDVA+RG+D Sbjct 356 ELTRKMRRDG---------WPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLD 406 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 407 VEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P I Sbjct 96 FYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153 >sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii OX=9601 GN=DDX5 PE=2 SV=1 Length=614 Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/338 (30%), Positives = 156/338 (46%), Gaps = 63/338 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFK-KYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 + P L++ P+RELA+Q ++Q +Y +L+ I GG Q+ LE GV+I Sbjct 166 DGPICLVLAPTRELAQQ----VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEIC 221 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 + TPGRL D + GK NL + +LVLDEAD +L G+ I ++ + Q+ D Q Sbjct 222 IATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKI---VDQIRPD---RQT 275 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT +P V ED + D +H + + L +H Sbjct 276 LMWSAT---------------WPKEVRQLAEDFLKDYIHINIGALE---------LSANH 311 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE---HKMDQAIIFCRTKIDCD 520 N ++ + K E +R ++E K ++ I+F TK CD Sbjct 312 ----------------NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD 355 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + + G + + +HGD+ ER L FK G LI TDVA+RG+D Sbjct 356 ELTRKMRRDG---------WPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLD 406 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 407 VEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P I Sbjct 96 FYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153 >sp|Q6CT46|DBP3_KLULA ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP3 PE=3 SV=1 Length=504 Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 108/340 (32%), Positives = 156/340 (46%), Gaps = 57/340 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K L++ P+RELA Q +N+ D LR + GGV Q L +VV TP Sbjct 165 KVLVISPTRELASQIYDNLIVL---TDACGLRSCCVYGGVPKDQQREDLRRS-QVVVATP 220 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL+ G ++LS V +LVLDEAD +L +G+ + I ++ I Q S + Q ++ + Sbjct 221 GRLLDLIEEGSVDLSHVNYLVLDEADRMLEKGFEEDIKKI---IRQTRSTSR--QTLMFT 275 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 AT +V++L+ M P V + D S + +V V+P + + K Sbjct 276 ATWPK-EVRELASSFMSEPVKVSIGNRDELSANKRITQIVEVVDP-----FRKEKKLLEL 329 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 H+ P N D+ +IF K + +E+ Sbjct 330 LKKYHSG----PTKN--------------------------DKVLIFALYKKEASRVERN 359 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 G + +HGD +R Q L FK G L+ TDVAARG+DI V Sbjct 360 LKYNG---------YDVAAIHGDLSQQQRTQALNEFKAGKCNLLLATDVAARGLDIPNVK 410 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 VIN+T P ++YVHRIGR GRA + G A +L TE+EK Sbjct 411 TVINLTFPLTVEDYVHRIGRTGRAGQYGTAHTLF-TEQEK 449 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/58 (45%), Positives = 37/58 (64%), Gaps = 2/58 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS++ + +I + + + + PT IQA S P +L G DV+ AETGSGKT AF +P I Sbjct 96 FSQVSFIDQIQKEISK--FPKPTPIQAVSWPYLLAGKDVIGIAETGSGKTFAFGVPAI 151 >sp|Q2YUH3|CSHA_STAAB DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=cshA PE=3 SV=1 Length=506 Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 99/334 (30%), Positives = 159/334 (48%), Gaps = 62/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 ++LI+ P+RELA Q +++F + ++ + + GG+ Q+ L+ G IVVGTP Sbjct 71 QSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGMPIERQIKALKKGPQIVVGTP 127 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L + L+LDEAD +++ G+ D + + ++IP V + Q ++ S Sbjct 128 GRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAV-----QRQTMLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIR 465 AT+ ++ L ++ M P + + E S P + +V K D L Sbjct 183 ATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFL------ 235 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 DVH PE+ AI+F RTK D L Sbjct 236 --DVH----------QPEL------------------------AIVFGRTKRRVDELTSA 259 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I +G + LHGD +R + L++FK + L+ TDVAARG+DI GV Sbjct 260 LISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVS 310 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V N +P + ++Y HRIGR GRA + G+A++ V Sbjct 311 HVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFV 344 Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIV 64 I+ V Sbjct 61 IEKV 64 >sp|Q4R6M5|DDX5_MACFA Probable ATP-dependent RNA helicase DDX5 OS=Macaca fascicularis OX=9541 GN=DDX5 PE=2 SV=1 Length=614 Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 100/338 (30%), Positives = 156/338 (46%), Gaps = 63/338 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFK-KYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 + P L++ P+RELA+Q ++Q +Y +L+ I GG Q+ LE GV+I Sbjct 166 DGPICLVLAPTRELAQQ----VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEIC 221 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 + TPGRL D + GK NL + +LVLDEAD +L G+ I ++ + Q+ D Q Sbjct 222 IATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKI---VDQIRPD---RQT 275 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT +P V ED + D +H + + L +H Sbjct 276 LMWSAT---------------WPKEVRQLAEDFLKDYIHINIGALE---------LSANH 311 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE---HKMDQAIIFCRTKIDCD 520 N ++ + K E +R ++E K ++ I+F TK CD Sbjct 312 ----------------NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD 355 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + + G + + +HGD+ ER L FK G LI TDVA+RG+D Sbjct 356 ELTRKMRRDG---------WPAMGIHGDKSQQERGWVLNEFKHGKAPILIATDVASRGLD 406 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 407 VEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P I Sbjct 96 FYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153 >sp|Q99MJ9|DDX50_MOUSE ATP-dependent RNA helicase DDX50 OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1 Length=734 Score = 136 bits (342), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 165/334 (49%), Gaps = 58/334 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 +PK L++ P+RELA Q + K + KL GG + + Q++ + NG+DI+VG Sbjct 208 SPKVLVLAPTRELANQVAKDFKDITR-----KLSVACFYGGTSYQSQINQIRNGIDILVG 262 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + +G+L+LS++R +VLDE D +L G+++ + + ++ + S+ Q ++ Sbjct 263 TPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDN-PQTLL 321 Query 406 CSATLHSFDVKKLSEKIMHFP-TWVDLKGE--DSVPDTVHHVVVPVNPKTDRLWERLGKS 462 SAT + V K+++K M VDL G+ TV H+ + + W Sbjct 322 FSATCPQW-VYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCH------W------ 368 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + P + + +++ G +AIIFC TK + + Sbjct 369 ----------------SQRPAVIGDVLQVYSGSEG----------RAIIFCETKKNVTEM 402 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 P K + CLHGD +R+ L+ F++G + L+ T+VAARG+DI Sbjct 403 -------AMNPHIKQN---AQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP 452 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 V VI + P + ++Y+HR GR GRA R G+ + Sbjct 453 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICV 486 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 45/79 (57%), Gaps = 7/79 (9%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 AFS + E + ++ + +L P IQ ++ + G D++ A TG+GKT +F+IP+ Sbjct 135 AFSNFSISEETIKLLKGRGVTYLFP--IQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPL 192 Query 61 IQIVYETLKDQQEGKKGKT 79 I+ + ++Q+ KK ++ Sbjct 193 IERLQ---RNQETIKKSRS 208 >sp|B0TJ29|RHLB_SHEHH ATP-dependent RNA helicase RhlB OS=Shewanella halifaxensis (strain HAW-EB4) OX=458817 GN=rhlB PE=3 SV=1 Length=436 Score = 132 bits (332), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 105/338 (31%), Positives = 166/338 (49%), Gaps = 57/338 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ L+ ++ GG Q VL+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDANLLAKHTG---LKVGIVYGGEGYEVQRKVLDKGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G +N+S ++ +VLDEAD + G+ I + ++P D K + Sbjct 140 GTTGRIIDYVRQGVINVSCIQAVVLDEADRMFDLGFIKDIRFLFRRMP----DAKSRLNM 195 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SATL S V++L+ M+ P V+ + N KT + Sbjct 196 LFSATL-SMKVQELAYDHMNEPEKVE---------------IAPNEKTSK---------- 229 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 N + P M E + +L + ++E ++AI+F TK C+ + Sbjct 230 ---------NIKEEIFYPSM-EEKMPLL-----LSLLEEDWPEKAIVFSNTKHSCEKVWS 274 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + GH+ L GD +R + LE+F KG++ L+ TDVAARG+ I V Sbjct 275 WL-------EGDGHRAGL--LTGDVPQKKRLRILEQFTKGEIDILVATDVAARGLHIADV 325 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA + G+++S E Sbjct 326 SHVYNYDLPDDCEDYVHRIGRTGRAGQKGISVSFACEE 363 Score = 41.2 bits (95), Expect = 0.029, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ + E+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKTLAFLVATFNH 70 Query 64 VYET 67 + T Sbjct 71 LLST 74 >sp|Q81IT9|CSHA_BACCR DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=cshA PE=2 SV=2 Length=533 Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 159/333 (48%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +++ P+RELA Q + + K+ ++R L I GG Q+ L+ I+VGTP Sbjct 72 QGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQDINRQIRALKKHPHIIVGTP 128 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L L V +VLDEAD +L+ G+ + I + +P+ Q ++ S Sbjct 129 GRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH------QTLLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +++++E+ M P HI+ Sbjct 183 ATMPD-PIRRIAERFMTEP-----------------------------------QHIK-- 204 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 V AK+ T P N + + E + K + R + + AI+F RTK D L + Sbjct 205 -VKAKEVTMP--NIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN 261 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G ++ +HGD +R L +FK+G + L+ TDVAARG+DI GV +V Sbjct 262 LRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHV 312 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 N +P + ++YVHRIGR GRA + G+A+ V Sbjct 313 YNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVT 345 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/74 (42%), Positives = 47/74 (64%), Gaps = 1/74 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEG 74 + V +T K+ +G Sbjct 61 LDKV-DTHKESVQG 73 >sp|Q0CLJ6|DED1_ASPTN ATP-dependent RNA helicase ded1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=ded1 PE=3 SV=1 Length=674 Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 97/340 (29%), Positives = 151/340 (44%), Gaps = 70/340 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + ++F +R ++ GG QL +E G D++V T Sbjct 274 PTSLILAPTRELVSQIFDEARKFAY---RSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 330 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++L +++L+LDEAD +L G+ I R+ +P V Q + Sbjct 331 PGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPHVNDR----QTL 386 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL----- 459 + SAT FP + + D + D V V V ++ + +++ Sbjct 387 MFSAT---------------FPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVED 431 Query 460 -GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K + D +H + +IF TK Sbjct 432 HDKRSVLLDILHTHGTS-------------------------------GLTLIFVETKRM 460 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D+L + + Q +F +HGDR ER++ LE F+ G L+ T VAA G Sbjct 461 ADSLSDFLLNQ---------RFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAASG 511 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +DI V +VIN LP + +YVHRIGR GRA G+A + Sbjct 512 LDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF 551 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 31/45 (69%), Gaps = 0/45 (0%) Query 22 WLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 +L PT +Q SIP+++ G D++ A+TGSGKTG F P++ ++ Sbjct 206 YLTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPILSQAFQ 250 >sp|Q73EU1|CSHA_BACC1 DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ATCC 10987 / NRS 248) OX=222523 GN=cshA PE=3 SV=1 Length=525 Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 159/333 (48%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +++ P+RELA Q + + K+ ++R L I GG Q+ L+ I+VGTP Sbjct 72 QGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQDINRQIRALKKHPHIIVGTP 128 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L L V +VLDEAD +L+ G+ + I + +P+ Q ++ S Sbjct 129 GRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH------QTLLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +++++E+ M P HI+ Sbjct 183 ATMPD-PIRRIAERFMTEP-----------------------------------QHIK-- 204 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 V AK+ T P N + + E + K + R + + AI+F RTK D L + Sbjct 205 -VKAKEVTMP--NIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN 261 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G ++ +HGD +R L +FK+G + L+ TDVAARG+DI GV +V Sbjct 262 LRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHV 312 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 N +P + ++YVHRIGR GRA + G+A+ V Sbjct 313 YNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVT 345 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/74 (42%), Positives = 47/74 (64%), Gaps = 1/74 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEG 74 + V +T K+ +G Sbjct 61 LDKV-DTHKESVQG 73 >sp|Q6FP38|DBP1_CANGA ATP-dependent RNA helicase DBP1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP1 PE=3 SV=1 Length=604 Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/342 (29%), Positives = 154/342 (45%), Gaps = 59/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+RELA Q + + KKY ++ ++ GG Q+ ++ G +++V T Sbjct 222 PSALVLAPTRELAIQIFD---EAKKYTYRSWVKPYVVYGGAPIGQQMRDMDRGCNLLVAT 278 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL+DL+ GK++L V++LVLDEAD +L G+ I + +P V Q + Sbjct 279 PGRLNDLLERGKISLVNVKYLVLDEADRMLDMGFEPQIRHIVEDCDMPSVND----RQTL 334 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + D + D + V V ++ + +++ + Sbjct 335 MFSAT---------------FPREIQHLARDFLKDYIFLSVGRVGSTSENIQQKV----L 375 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +D S + IL E ++F TK D L Sbjct 376 FVEDYDKN-------------SALLDILINEID---------GLTLVFVETKRMADQLTD 413 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I Q F +HGDR ER++ L F+ G L+ T VAARG+DI V Sbjct 414 FLIVQ---------NFKATAIHGDRTQAERERALHAFRNGIANILVATAVAARGLDIPNV 464 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN LP + +YVHRIGR GRA +G+A S + + Sbjct 465 TNVINYDLPTDIDDYVHRIGRTGRAGNVGVATSFFNSNSMNI 506 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/53 (38%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 + + VE ++ PT +Q SIP++ D++ A+TGSGKTG F PV+ ++ Sbjct 149 LLENVELANFSKPTPVQKYSIPIVTKNRDLMACAQTGSGKTGGFLFPVLSELF 201 >sp|Q2GUI4|DBP3_CHAGB ATP-dependent RNA helicase DBP3 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP3 PE=3 SV=1 Length=566 Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 110/342 (32%), Positives = 166/342 (49%), Gaps = 45/342 (13%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE--NGVDIVVG 345 +A++V P+RELA QT + + L + + GG DQ ++L +G DI+V Sbjct 261 RAVVVSPTRELAMQTHAAMSSLASLVG---LSVVCLYGGAPKDDQRALLRKNSGADIIVA 317 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI-PQVTSDGKRLQVI 404 TPGRL D +S G ++LS V F VLDEAD +L +G+ + I + P+ ++ Q + Sbjct 318 TPGRLKDFLSEGCVSLSDVMFAVLDEADRMLDKGFEEDIKLILGSCRPR-----EKRQTL 372 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT + V+ L+E M P + + N T+ +++I Sbjct 373 MFTATWPT-SVRGLAEGFMIDPVKATIGNRTRAGEEGEG-----NGSTEL------QANI 420 Query 465 RTDD-VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 R + V D E+ EA K K D+ ++FC K + +E Sbjct 421 RIEQKVEVVDPRGKEQRLLELLKEAQK-----------GSAKNDRILVFCLYKKEAVRVE 469 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 Q ++G +HGD + +R ++LE FK G L+ TDVAARG+DI Sbjct 470 QNLERRG---------IRVCSIHGDLRQDQRTRSLESFKAGTTSVLVATDVAARGLDIPE 520 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V VINVT P ++YVHRIGR GRA + G AI+L TE +K Sbjct 521 VKLVINVTFPLTIEDYVHRIGRTGRAGKKGKAITLF-TEHDK 561 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/48 (50%), Positives = 31/48 (65%), Gaps = 0/48 (0%) Query 22 WLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLK 69 + PT IQA S P L G DV+ AETGSGKT AF++P I+ + + K Sbjct 201 FTAPTPIQAASWPFALSGRDVIGIAETGSGKTMAFAVPCIESLASSPK 248 >sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus OX=10090 GN=Ddx41 PE=1 SV=2 Length=622 Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 101/350 (29%), Positives = 170/350 (49%), Gaps = 64/350 (18%) Query 277 VTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYI---DNPKLRELLIIGGVAA 329 + Q K LP P LI+ PSRELA QT ++ + + + +P LR L IGG++ Sbjct 244 LEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSV 303 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 ++Q+ + +GV ++V TPGRL DL+ ++L R+L LDEAD ++ G+ I + + Sbjct 304 KEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFS 363 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 G+R Q ++ SAT+ +KI +F +K P T++ Sbjct 364 YF-----KGQR-QTLLFSATM--------PKKIQNFAKSALVK-----PVTIN------- 397 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 +G++ + DV E E K++ Y + +++ Sbjct 398 ---------VGRAGAASLDV---------IQEVEYVKEEAKMV---YLLECLQKTP-PPV 435 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +IF K D D + +Y + +G V +HG + ER + +E F++G L Sbjct 436 LIFAEKKADVDAIHEYLLLKG---------VEAVAIHGGKDQEERTKAIEAFREGKKDVL 486 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + TDVA++G+D + +VIN +P+E +NYVHRIGR GR+ G+A + + Sbjct 487 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 536 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 28/69 (41%), Positives = 39/69 (57%), Gaps = 0/69 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F EM I + +++ L PT IQ + IP IL G D++ A TGSGKT F++PV Sbjct 180 IKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPV 239 Query 61 IQIVYETLK 69 I E K Sbjct 240 IMFCLEQEK 248 >sp|Q9V3C0|DDX41_DROME ATP-dependent RNA helicase abstrakt OS=Drosophila melanogaster OX=7227 GN=abs PE=1 SV=1 Length=619 Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 101/345 (29%), Positives = 165/345 (48%), Gaps = 66/345 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDN---PKLRELLIIGGVAARDQLSVLENGVDIV 343 P LI+ PSRELA+QT I+ + K++ P++R L +GG+ + L V+ GV IV Sbjct 254 PYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIV 313 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGRL D++ L L R+L +DEAD ++ G+ + + + + G+R Q Sbjct 314 VATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFF-----KGQR-QT 367 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT+ +KI +F +K P T+ Sbjct 368 LLFSATM--------PKKIQNFARSALVK-----PVTI---------------------- 392 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA---IIFCRTKIDCD 520 + R GA S + ++ ++ +K E V + + A +IF K D D Sbjct 393 ---------NVGRAGAASMNV-TQQVEYVKQEAKVVYLLDCLQKTAPPVLIFAEKKQDVD 442 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + +Y + +G V +HG + ER + ++ ++ G L+ TDVA++G+D Sbjct 443 CIHEYLLLKG---------VEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLD 493 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VIN +PD+ +NYVHRIGR GR+ GLA +L+ E+ Sbjct 494 FPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQ 538 Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/42 (48%), Positives = 26/42 (62%), Gaps = 0/42 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 PT IQ + +P +L G D++ A TGSGKT F +PVI E Sbjct 200 PTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALE 241 >sp|Q755W0|FAL1_EREGS ATP-dependent RNA helicase FAL1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=FAL1 PE=3 SV=2 Length=398 Score = 131 bits (329), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 103/338 (30%), Positives = 155/338 (46%), Gaps = 60/338 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA Q ++ Y++ + L GG A + +S + G ++ GTP Sbjct 93 QALVLSPTRELAAQISQVVRNLGDYMN---VVALACTGGKALQQDISKVNKGCHVMSGTP 149 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ--GYSDFINRMHNQIPQVTSDGKRLQVIV 405 GR+ D++ +N V+ LVLDEAD LLS+ G+ + + ++P Sbjct 150 GRVLDMIKRRIINTRHVKMLVLDEADELLSETLGFKQQLYDIFTKLPSSVQVVVV----- 204 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ S DV ++++K M P + +K D V E + + HI Sbjct 205 -SATM-SKDVLEVTKKFMSDPVKILVK-RDEVS-----------------LEGIKQYHIN 244 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 D E W K + + Q +IFC TK D L Sbjct 245 VD--------------KEEW-------KFDTLCDLYDSLTITQCVIFCNTKKKVDWLSHK 283 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 IQ + F+ +HGD K +R + + F+ G R LI TDV ARGID+ V Sbjct 284 LIQ---------NNFAVASIHGDMKQDDRDKVMSDFRSGSSRVLISTDVWARGIDVQQVS 334 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 VIN LP+ +NY+HRIGR GR R G+AI+ + E+ Sbjct 335 LVINYDLPELLENYIHRIGRSGRFGRKGVAINFITREE 372 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++Q Sbjct 24 TFESMKLQENLLRGIYGYGFEAPSAIQSRAITQIIRGKDVIAQAQSGTGKTATFTIGMLQ 83 Query 63 IVYETLKDQQ 72 ++ + KD Q Sbjct 84 VIDSSSKDLQ 93 >sp|Q63GX5|CSHA_BACCZ DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ZK / E33L) OX=288681 GN=cshA PE=3 SV=1 Length=528 Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/332 (30%), Positives = 159/332 (48%), Gaps = 59/332 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +++ P+RELA Q + + K+ ++R L I GG Q+ L+ I+VGTP Sbjct 72 QGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQDINRQIRALKKHPHIIVGTP 128 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L L V +VLDEAD +L+ G+ + I + +P+ Q ++ S Sbjct 129 GRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH------QTLLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +++++E+ M P HI+ Sbjct 183 ATMPD-PIRRIAERFMTEP-----------------------------------QHIK-- 204 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 V AK+ T P N + + E + K + R + + AI+F RTK D L + Sbjct 205 -VKAKEVTMP--NIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN 261 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G ++ +HGD +R L +FK+G + L+ TDVAARG+DI GV +V Sbjct 262 LRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHV 312 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 N +P + ++YVHRIGR GRA + G+A+ V Sbjct 313 YNFDIPQDPESYVHRIGRTGRAGKKGIAMLFV 344 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/74 (42%), Positives = 47/74 (64%), Gaps = 1/74 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEG 74 + V +T K+ +G Sbjct 61 LDKV-DTHKESVQG 73 >sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens OX=9606 GN=DDX41 PE=1 SV=2 Length=622 Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 101/350 (29%), Positives = 170/350 (49%), Gaps = 64/350 (18%) Query 277 VTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYI---DNPKLRELLIIGGVAA 329 + Q K LP P LI+ PSRELA QT ++ + + + +P LR L IGG++ Sbjct 244 LEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSV 303 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 ++Q+ + +GV ++V TPGRL DL+ ++L R+L LDEAD ++ G+ I + + Sbjct 304 KEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFS 363 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 G+R Q ++ SAT+ +KI +F +K P T++ Sbjct 364 YF-----KGQR-QTLLFSATM--------PKKIQNFAKSALVK-----PVTIN------- 397 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 +G++ + DV E E K++ Y + +++ Sbjct 398 ---------VGRAGAASLDV---------IQEVEYVKEEAKMV---YLLECLQKTP-PPV 435 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +IF K D D + +Y + +G V +HG + ER + +E F++G L Sbjct 436 LIFAEKKADVDAIHEYLLLKG---------VEAVAIHGGKDQEERTKAIEAFREGKKDVL 486 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + TDVA++G+D + +VIN +P+E +NYVHRIGR GR+ G+A + + Sbjct 487 VATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFI 536 Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 0/69 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F EM I + +++ PT IQ + IP IL G D++ A TGSGKT F++PV Sbjct 180 IKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPV 239 Query 61 IQIVYETLK 69 I E K Sbjct 240 IMFCLEQEK 248 >sp|B8CHZ1|RHLB_SHEPW ATP-dependent RNA helicase RhlB OS=Shewanella piezotolerans (strain WP3 / JCM 13877) OX=225849 GN=rhlB PE=3 SV=1 Length=437 Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 103/338 (30%), Positives = 165/338 (49%), Gaps = 57/338 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ L+ ++ GG Q VL+ G+DI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDANLLAKHTG---LKVGIVYGGEGYEAQRKVLDKGIDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G +++S ++ +VLDEAD + G+ I + ++P D K + Sbjct 140 GTTGRIIDYVRQGVIDVSAIQAVVLDEADRMFDLGFIKDIRFLFRRMP----DAKSRLNM 195 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SATL S V++L+ M+ P V+ + N KT + Sbjct 196 LFSATL-SMKVQELAYDHMNEPEKVE---------------IAPNEKTSK---------- 229 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 N + P M E + +L + ++E ++AI+F TK C+ + Sbjct 230 ---------NIKEEIFYPSM-EEKMPLL-----LSLLEEDWPEKAIVFSNTKHSCEKVWS 274 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + GH+ L GD +R + LE+F GD+ L+ TDVAARG+ I V Sbjct 275 WL-------EGDGHRVGL--LTGDVPQKKRLRILEQFTSGDIDVLVATDVAARGLHIADV 325 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA + G+++S E Sbjct 326 SHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEE 363 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 35/55 (64%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F++ + E+ QA+ E+ + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFPLHKEVQQALNEVGFEFCTPIQALSLPILLAKKDIAGQAQTGTGKTLAFLV 65 >sp|Q6FJG1|FAL1_CANGA ATP-dependent RNA helicase FAL1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=FAL1 PE=3 SV=1 Length=399 Score = 131 bits (329), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/336 (29%), Positives = 156/336 (46%), Gaps = 61/336 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS-VLENGVDIVVGT 346 +AL++ P+RELA Q + Y++ ++ + GG +D L + ++G ++ GT Sbjct 93 QALVLSPTRELAAQIGKVVTNLGDYMN---VKAYAMTGGKTMKDDLKKIQKHGCQVISGT 149 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ--GYSDFINRMHNQIPQVTSDGKRLQVI 404 PGR+ D++ + V+ LVLDEAD LLS G+ I + ++P+ + QV+ Sbjct 150 PGRVLDMIKRRLIETRHVQILVLDEADELLSDTLGFKHQIYDIFTKLPRTS------QVV 203 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 V SAT+ S ++ ++++K M+ P + +K ++ + + V V Sbjct 204 VVSATM-SPEILEITKKFMNDPVKILVKRDEITLEGIKQYYVNVEK-------------- 248 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 E W K + + Q +IFC +K D L Sbjct 249 ------------------EEW-------KFDTLCDIYDSLTITQCVIFCNSKKKVDWLAH 283 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 K F+ + +HGD K ER + + F+ G R LI TDV ARGID+ V Sbjct 284 KL---------KQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLISTDVWARGIDVQQV 334 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 VIN LP+ +NYVHRIGR GR R G+AI+ + Sbjct 335 SLVINYDLPEITENYVHRIGRSGRFGRKGVAINFLT 370 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F M + + + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++ Sbjct 23 ATFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGML 82 Query 62 QIV 64 Q + Sbjct 83 QAI 85 >sp|Q6HPE6|CSHA_BACHK DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) OX=281309 GN=cshA PE=3 SV=1 Length=528 Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 159/333 (48%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +++ P+RELA Q + + K+ ++R L I GG Q+ L+ I+VGTP Sbjct 72 QGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQDINRQIRALKKHPHIIVGTP 128 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L L V +VLDEAD +L+ G+ + I + +P+ Q ++ S Sbjct 129 GRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH------QTLLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +++++E+ M P HI+ Sbjct 183 ATMPD-PIRRIAERFMTEP-----------------------------------QHIK-- 204 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 V AK+ T P N + + E + K + R + + AI+F RTK D L + Sbjct 205 -VKAKEVTMP--NIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN 261 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G ++ +HGD +R L +FK+G + L+ TDVAARG+DI GV +V Sbjct 262 LRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHV 312 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 N +P + ++YVHRIGR GRA + G+A+ V Sbjct 313 YNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVT 345 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/74 (42%), Positives = 47/74 (64%), Gaps = 1/74 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEG 74 + V +T K+ +G Sbjct 61 LDKV-DTHKESVQG 73 >sp|Q81VG0|CSHA_BACAN DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus anthracis OX=1392 GN=cshA PE=3 SV=1 Length=528 Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 159/333 (48%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +++ P+RELA Q + + K+ ++R L I GG Q+ L+ I+VGTP Sbjct 72 QGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQDINRQIRALKKHPHIIVGTP 128 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L L V +VLDEAD +L+ G+ + I + +P+ Q ++ S Sbjct 129 GRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH------QTLLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +++++E+ M P HI+ Sbjct 183 ATMPD-PIRRIAERFMTEP-----------------------------------QHIK-- 204 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 V AK+ T P N + + E + K + R + + AI+F RTK D L + Sbjct 205 -VKAKEVTMP--NIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN 261 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G ++ +HGD +R L +FK+G + L+ TDVAARG+DI GV +V Sbjct 262 LRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHV 312 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 N +P + ++YVHRIGR GRA + G+A+ V Sbjct 313 YNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVT 345 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/74 (42%), Positives = 47/74 (64%), Gaps = 1/74 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEG 74 + V +T K+ +G Sbjct 61 LDKV-DTHKESVQG 73 >sp|A0R8U6|CSHA_BACAH DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus thuringiensis (strain Al Hakam) OX=412694 GN=cshA PE=3 SV=1 Length=528 Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 159/333 (48%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +++ P+RELA Q + + K+ ++R L I GG Q+ L+ I+VGTP Sbjct 72 QGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQDINRQIRALKKHPHIIVGTP 128 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D ++ L L V +VLDEAD +L+ G+ + I + +P+ Q ++ S Sbjct 129 GRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETH------QTLLFS 182 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ +++++E+ M P HI+ Sbjct 183 ATMPD-PIRRIAERFMTEP-----------------------------------QHIK-- 204 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 V AK+ T P N + + E + K + R + + AI+F RTK D L + Sbjct 205 -VKAKEVTMP--NIQQFYLEVQEKKKFDVLTRLLDIQSPELAIVFGRTKRRVDELSEALN 261 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G ++ +HGD +R L +FK+G + L+ TDVAARG+DI GV +V Sbjct 262 LRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAARGLDISGVTHV 312 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 N +P + ++YVHRIGR GRA + G+A+ V Sbjct 313 YNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVT 345 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/74 (42%), Positives = 47/74 (64%), Gaps = 1/74 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEG 74 + V +T K+ +G Sbjct 61 LDKV-DTHKESVQG 73 >sp|A3D9I5|RHLB_SHEB5 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) OX=325240 GN=rhlB PE=3 SV=1 Length=438 Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/341 (31%), Positives = 162/341 (48%), Gaps = 59/341 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q VL+ GVDI Sbjct 81 LINQPRAIIMAPTRELAIQIAKDAILLAKHT---HLKVGIVYGGESYDVQRKVLDQGVDI 137 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++GT GR+ D V G + L+ ++ +VLDEAD + G+ I + ++P+ +RL Sbjct 138 LIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGFIKDIRFLFRRMPEA---NQRLN 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGK 461 ++ SATL S V++L+ M+ P V++ E+ + + P + RL L + Sbjct 195 MLF-SATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEEKMRLLLTLIE 252 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 E W E +AI+F TK C+ Sbjct 253 ---------------------EDWPE--------------------KAIVFSNTKHSCET 271 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + + GH+ L GD +R + LE+F G + L+ TDVAARG+ I Sbjct 272 LWSWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTSGQLDILVATDVAARGLHI 322 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G++IS E Sbjct 323 SDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|B8E670|RHLB_SHEB2 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain OS223) OX=407976 GN=rhlB PE=3 SV=1 Length=438 Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/341 (31%), Positives = 162/341 (48%), Gaps = 59/341 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q VL+ GVDI Sbjct 81 LINQPRAIIMAPTRELAIQIAKDAILLAKHT---HLKVGIVYGGESYDVQRKVLDQGVDI 137 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++GT GR+ D V G + L+ ++ +VLDEAD + G+ I + ++P+ +RL Sbjct 138 LIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGFIKDIRFLFRRMPEA---NQRLN 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGK 461 ++ SATL S V++L+ M+ P V++ E+ + + P + RL L + Sbjct 195 MLF-SATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEEKMRLLLTLIE 252 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 E W E +AI+F TK C+ Sbjct 253 ---------------------EDWPE--------------------KAIVFSNTKHSCET 271 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + + GH+ L GD +R + LE+F G + L+ TDVAARG+ I Sbjct 272 LWSWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTSGQLDILVATDVAARGLHI 322 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G++IS E Sbjct 323 SDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|A9L5D5|RHLB_SHEB9 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain OS195) OX=399599 GN=rhlB PE=3 SV=1 Length=438 Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/341 (31%), Positives = 162/341 (48%), Gaps = 59/341 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q VL+ GVDI Sbjct 81 LINQPRAIIMAPTRELAIQIAKDAILLAKHT---HLKVGIVYGGESYDVQRKVLDQGVDI 137 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++GT GR+ D V G + L+ ++ +VLDEAD + G+ I + ++P+ +RL Sbjct 138 LIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGFIKDIRFLFRRMPEA---NQRLN 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGK 461 ++ SATL S V++L+ M+ P V++ E+ + + P + RL L + Sbjct 195 MLF-SATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEEKMRLLLTLIE 252 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 E W E +AI+F TK C+ Sbjct 253 ---------------------EDWPE--------------------KAIVFSNTKHSCET 271 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + + GH+ L GD +R + LE+F G + L+ TDVAARG+ I Sbjct 272 LWSWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTSGQLDILVATDVAARGLHI 322 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G++IS E Sbjct 323 SDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|A6WTD3|RHLB_SHEB8 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain OS185) OX=402882 GN=rhlB PE=3 SV=1 Length=438 Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/341 (31%), Positives = 162/341 (48%), Gaps = 59/341 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q VL+ GVDI Sbjct 81 LINQPRAIIMAPTRELAIQIAKDAILLAKHT---HLKVGIVYGGESYDVQRKVLDQGVDI 137 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++GT GR+ D V G + L+ ++ +VLDEAD + G+ I + ++P+ +RL Sbjct 138 LIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGFIKDIRFLFRRMPEA---NQRLN 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGK 461 ++ SATL S V++L+ M+ P V++ E+ + + P + RL L + Sbjct 195 MLF-SATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEEKMRLLLTLIE 252 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 E W E +AI+F TK C+ Sbjct 253 ---------------------EDWPE--------------------KAIVFSNTKHSCET 271 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + + GH+ L GD +R + LE+F G + L+ TDVAARG+ I Sbjct 272 LWSWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTSGQLDILVATDVAARGLHI 322 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G++IS E Sbjct 323 SDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|A1CJT5|IF4A_ASPCL ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=tif1 PE=3 SV=1 Length=398 Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 107/367 (29%), Positives = 171/367 (47%), Gaps = 65/367 (18%) Query 281 KFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K PN A +ALI+ P+RELA+Q + ++ L IGG R+ + L++ Sbjct 86 KIDPNLKACQALILAPTRELAQQIQKVVVAIGDFM---SLECHACIGGTNVREDMKALQD 142 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 G +VVGTPGR+ D++ L Q++ +LDEAD +LS+G+++ I + +PQ T Sbjct 143 GPQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQST--- 199 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 QV++ SAT+ DV +++ K M P + +K ++ + + + V Sbjct 200 ---QVVLLSATMPQ-DVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEK-------- 247 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 E W + L Y I QA+IFC T+ Sbjct 248 ------------------------EEWK--LDTLSDLYETVTIT-----QAVIFCNTRRK 276 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L F+ +HGD + +R ++ F+ G R LI TD+ ARG Sbjct 277 VDWLTDKL---------TARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARG 327 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 328 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQF 382 Query 639 YNTRLKE 645 Y+T+++E Sbjct 383 YSTQIEE 389 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 38/67 (57%), Gaps = 0/67 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + + + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLK 69 + LK Sbjct 86 KIDPNLK 92 >sp|O62591|IF4A_LEIMA Probable eukaryotic initiation factor 4A OS=Leishmania major OX=5664 GN=LmjF.01.0770 PE=3 SV=1 Length=403 Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/364 (31%), Positives = 173/364 (48%), Gaps = 61/364 (17%) Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD 341 F N + L++ P+RELA QT I + +++ N +GG +D L L+ GV Sbjct 90 FRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVI 149 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 + VGTPGR+ D++ G L +R LVLDEAD +LSQG++D I + +P K + Sbjct 150 VAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLP------KDI 203 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 QV + SAT+ +V +L++K M P + +K E E + + Sbjct 204 QVALFSATMPE-EVLELTKKFMRDPVRILVKRESLT------------------LEGIKQ 244 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 I ++ H D L Y +I Q++IF T+ D Sbjct 245 FFIAVEEEHKLDT-----------------LMDLYETVSIA-----QSVIFANTRRKVDW 282 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + ++ H S +H + +R++ + F+ G R L+ TD+ ARGID+ Sbjct 283 IAEKL-------NQSNHTVS--SMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDV 333 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 H V VIN LP K+NY+HRIGR GR R G+AI+ V TEK+ H + Y+T Sbjct 334 HHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFV-TEKDVELLHEIEAH----YHT 388 Query 642 RLKE 645 ++ E Sbjct 389 QIDE 392 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQ 62 +Q Sbjct 85 LQ 86 >sp|A4HRK0|IF4A_LEIIN Probable eukaryotic initiation factor 4A OS=Leishmania infantum OX=5671 GN=LinJ01.0780 PE=3 SV=1 Length=403 Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/364 (31%), Positives = 173/364 (48%), Gaps = 61/364 (17%) Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD 341 F N + L++ P+RELA QT I + +++ N +GG +D L L+ GV Sbjct 90 FRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCETFVGGTRVQDDLRKLQAGVI 149 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 + VGTPGR+ D++ G L +R LVLDEAD +LSQG++D I + +P K + Sbjct 150 VAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFADQIYEIFRFLP------KDI 203 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 QV + SAT+ +V +L++K M P + +K E E + + Sbjct 204 QVALFSATMPE-EVLELTKKFMRDPVRILVKRESLT------------------LEGIKQ 244 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 I ++ H D L Y +I Q++IF T+ D Sbjct 245 FFIAVEEEHKLDT-----------------LMDLYETVSIA-----QSVIFANTRRKVDW 282 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + ++ H S +H + +R++ + F+ G R L+ TD+ ARGID+ Sbjct 283 IAEKL-------NQSNHTVS--SMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDV 333 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 H V VIN LP K+NY+HRIGR GR R G+AI+ V TEK+ H + Y+T Sbjct 334 HHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFV-TEKDVELLHEIEAH----YHT 388 Query 642 RLKE 645 ++ E Sbjct 389 QIDE 392 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQ 62 +Q Sbjct 85 LQ 86 >sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0481100 PE=2 SV=2 Length=802 Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/391 (29%), Positives = 178/391 (46%), Gaps = 67/391 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A + LI+ P+RELA Q + I++ ++ D +R LI+GG++ + Q L + DIVV Sbjct 265 AIRVLILTPTRELAAQVHSMIEKLAQFTD---IRCCLIVGGLSTKVQEVALRSMPDIVVA 321 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR+ D L ++ + L + L+LDEAD LL G+S I + P +R Q + Sbjct 322 TPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQELIRMCP------RRRQTM 375 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ + ++ +L ++ P ++ P T+ VV + Sbjct 376 LFSATM-TEEINELVTLSLNKPVRLEADPSLKRPATLTEEVVRIR--------------- 419 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R + + +K K D+ IIF TK L+ Sbjct 420 ---------RAREANQEAVLLALCLKTFK-------------DKVIIFSGTKHSAHRLKI 457 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F G LHG+ +R + LE FKK +V FLI TDVAARGIDI GV Sbjct 458 IFGLSG---------MKAAELHGNLTQAQRLEALELFKKQEVDFLIATDVAARGIDIVGV 508 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRL- 643 VIN + P + + Y+HR+GR RA R G A++ V T+ ++ + + +R+ Sbjct 509 RTVINFSCPRDARTYLHRVGRTARAGREGYAVTFV-TDDDRSLLKAIAKKAGSQLKSRIV 567 Query 644 --KEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 K C +L+ E+E+ ++ I + Sbjct 568 AEKPVAECA------KLIEELEDQISTIIQE 592 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+ + + +A E + + PT IQA IPL L G D+ +A TGSGKT AFS+PV++ Sbjct 195 SFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLE 254 >sp|A0KS84|RHLB_SHESA ATP-dependent RNA helicase RhlB OS=Shewanella sp. (strain ANA-3) OX=94122 GN=rhlB PE=3 SV=1 Length=439 Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 105/339 (31%), Positives = 161/339 (47%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q L+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDAILLAKH---SHLKVGIVYGGESYDVQRKTLDQGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G +NL ++ +VLDEAD + G+ I + ++P S +RL ++ Sbjct 140 GTTGRIIDYVRQGIINLGGIQAVVLDEADRMFDLGFIKDIRFLFRRMP---SADQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S V++L+ M+ P V++ E+ + + P RL L + Sbjct 197 F-SATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEDKMRLLLTLIE-- 252 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 E W E +AI+F TK C+NL Sbjct 253 -------------------EDWPE--------------------KAIVFSNTKHSCENLW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + GH+ L GD +R + LE+F +G + L+ TDVAARG+ I Sbjct 274 SWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLHISD 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G+++S E Sbjct 325 VSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEE 363 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|P19109|DDX17_DROME ATP-dependent RNA helicase p62 OS=Drosophila melanogaster OX=7227 GN=Rm62 PE=1 SV=3 Length=719 Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/378 (30%), Positives = 173/378 (46%), Gaps = 65/378 (17%) Query 255 FVALSKAPDG----YIVKS-QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 FV ++K G YI+ + H N Q Q + P AL++ P+RELA+Q +F Sbjct 321 FVGIAKTGSGKTLGYILPAIVHINNQQPLQRG---DGPIALVLAPTRELAQQIQQVATEF 377 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 + +R + GG Q+ L+ G +IV+ TPGRL D +S G NL + +LVL Sbjct 378 GS---SSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVL 434 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD +L G+ I ++ + Q+ D Q ++ SAT +VK+L+E + ++ Sbjct 435 DEADRMLDMGFEPQIRKI---VSQIRPD---RQTLMWSATWPK-EVKQLAEDFLG--NYI 485 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS--E 487 + +I + ++ A N R + + +S E Sbjct 486 QI-------------------------------NIGSLELSANHNIRQVVDVCDEFSKEE 514 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 +K L + + K+ IIF TK DNL + FI+ G C +HG Sbjct 515 KLKTLLSDIYDTSESPGKI---IIFVETKRRVDNLVR-FIRSFG--------VRCGAIHG 562 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 D+ ER L F+ G L+ TDVAARG+D+ G+ YVIN P ++Y+HRIGR G Sbjct 563 DKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTG 622 Query 608 RAERMGLAISLVATEKEK 625 R+ G + + K Sbjct 623 RSNTKGTSFAFFTKNNAK 640 Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust. Identities = 19/58 (33%), Positives = 33/58 (57%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FSE+ + + + + + PT IQA+ P+ + G + + A+TGSGKT + +P I Sbjct 283 FSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAI 340 >sp|A1CX72|PRP28_NEOFI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=prp28 PE=3 SV=1 Length=796 Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/361 (27%), Positives = 167/361 (46%), Gaps = 67/361 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q ++F + + + I+GG + +Q L NG +I++ Sbjct 441 DGPYAIVLAPTRELAQQIEIEARKFTQPLG---FNVVSIVGGHSFEEQAYSLRNGAEIII 497 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG------ 398 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P VT++ Sbjct 498 ATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALP-VTNEKPDTEEA 556 Query 399 ---------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + Q ++ +AT+ S V++++ K + P V + DTV V + Sbjct 557 ENSAAMRSHRYRQTMMYTATMPSA-VERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIA 615 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + D+ +RL D+ + RP Sbjct 616 GE-DKRKKRLA-------DILSSGEFRP------------------------------PI 637 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 I+F K +CD + + Q G FS V LHG + +R+ L + G L Sbjct 638 IVFVNIKRNCDAIAREIKQMG---------FSSVTLHGSKTQEQREAALASVRNGSTDVL 688 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TD+A RGID+ V V+N + + ++Y HRIGR GRA + G+AI+ + E V Y Sbjct 689 VATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYD 748 Query 630 V 630 + Sbjct 749 L 749 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 40/66 (61%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V+++ + PT IQ +IP+ L D++ A TGSGKT +F +P+ Sbjct 363 MRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPL 422 Query 61 IQIVYE 66 + + E Sbjct 423 LVYISE 428 >sp|P09052|VASA1_DROME ATP-dependent RNA helicase vasa OS=Drosophila melanogaster OX=7227 GN=vas PE=1 SV=3 Length=661 Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/340 (28%), Positives = 151/340 (44%), Gaps = 58/340 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ +IV P+RELA Q N + +K+ L+ ++ GG + R Q + G +V+ T Sbjct 319 PQVVIVSPTRELAIQIFN---EARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIAT 375 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D V + RF+VLDEAD +L G+S+ + R+ + Q ++ Sbjct 376 PGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEH----QTLMF 431 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT ++++++ + + +V + V + VN R Sbjct 432 SATFPE-EIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKR------------ 478 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 S+ I+IL + D I+F TK D L + Sbjct 479 -------------------SKLIEILS----------EQADGTIVFVETKRGADFLASFL 509 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 ++ +F +HGDR +R+Q L FK G ++ LI T VA+RG+DI + + Sbjct 510 SEK---------EFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKH 560 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN +P + +YVHRIGR GR G A S EK++ Sbjct 561 VINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRA 600 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/72 (35%), Positives = 41/72 (57%), Gaps = 0/72 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+ + I V + + +PT IQ SIP+I G D++ A+TGSGKT AF +P++ Sbjct 247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSK 306 Query 64 VYETLKDQQEGK 75 + E + + G+ Sbjct 307 LLEDPHELELGR 318 >sp|B5FF87|RHLB_ALIFM ATP-dependent RNA helicase RhlB OS=Aliivibrio fischeri (strain MJ11) OX=388396 GN=rhlB PE=3 SV=1 Length=432 Score = 131 bits (329), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 109/336 (32%), Positives = 164/336 (49%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I+ P+RELA Q N+ + I + L+ L GG Q V+E GVDI++GT Sbjct 85 PRAIIMAPTRELAIQIFNDAESL---IASTGLKAALAYGGERYEKQQQVIEQGVDILIGT 141 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D G ++ ++ +VLDEAD + G+ I + ++P T +RL ++ Sbjct 142 TGRIIDFYKQGHIDFKMIQAVVLDEADRMFDLGFIKDIRFIFRRMPAPT---ERLNMLF- 197 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M P HVVV KT H Sbjct 198 SATL-SYRVQELAFEHMQEP---------------EHVVVEPEQKT---------GHRIK 232 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +++ N + +L+ I+E D+AIIF TK C+++ + Sbjct 233 EELFYPSN-----------DHKMALLQT-----LIEEEWPDRAIIFANTKHKCESVWGHL 276 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK H+ L GD +R++ LE F +G+V L+ TDVAARG+ I V + Sbjct 277 -----AADK--HRVGL--LTGDVPQKKRERILEEFTQGNVDILVATDVAARGLHIPQVTH 327 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LP+E ++YVHRIGR GRA G +IS E Sbjct 328 VFNFDLPNEAEDYVHRIGRTGRAGASGNSISFACEE 363 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/53 (36%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++G+ P++ + ++ T IQA+++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAF 63 >sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 PE=2 SV=1 Length=501 Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/336 (29%), Positives = 154/336 (46%), Gaps = 61/336 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F + K++ I GGV Q+ L+ GV+IV+ Sbjct 171 DGPIVLVLAPTRELAVQIQQEASKFGS---SSKIKTTCIYGGVPKGPQVRDLQKGVEIVI 227 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ + NL +V +LVLDEAD +L G+ I ++ + I Q + Sbjct 228 ATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHI------RPDRQTL 281 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT +V++LS+K ++ P V + D + +V V ++ + Sbjct 282 YWSATWPK-EVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQK---------- 330 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD--QAIIFCRTKIDCDNL 522 +++ +K+L E MD + ++F TK CD + Sbjct 331 --------------------YNKLVKLL----------EDIMDGSRILVFLDTKKGCDQI 360 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + G + + +HGD+ ER L F+ G + TDVAARG+D+ Sbjct 361 TRQLRMDG---------WPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVK 411 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V YVIN P ++YVHRIGR GRA G A + Sbjct 412 DVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTF 447 Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/59 (34%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G + + V++ + PT IQ++ P+ + G D++ AETGSGKT ++ +P I Sbjct 100 SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158 >sp|Q0UAT0|FAL1_PHANO ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=FAL1 PE=3 SV=3 Length=374 Score = 129 bits (325), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/304 (31%), Positives = 140/304 (46%), Gaps = 57/304 (19%) Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 IGG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD LL++G+ + Sbjct 103 IGGTNVGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRNIKMLVLDEADELLNRGFREQ 162 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 I ++ +P T QV+V SATL +DV +++ K M P + +K ++ + + Sbjct 163 IYDVYRYLPPAT------QVVVVSATL-PYDVLEMTTKFMTDPVRILVKRDELTLEGLKQ 215 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + + E W L Y I Sbjct 216 YFIAI--------------------------------EKEEWK--FDTLCDLYDTLTIT- 240 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC T+ D L DK + F+ +HGD ER ++ F+ Sbjct 241 ----QAVIFCNTRRKVDWL----------TDKMREANFTVSSMHGDMPQRERDSIMQDFR 286 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + + R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E Sbjct 287 QANSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTQE 346 Query 623 KEKV 626 ++ Sbjct 347 DVRI 350 Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust. Identities = 19/68 (28%), Positives = 35/68 (51%), Gaps = 0/68 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I + G D + A++G+GKT FSI ++Q Sbjct 26 TFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IVYETLKD 70 V L D Sbjct 86 SVIMGLGD 93 >sp|Q3MSQ8|DDX4_PELLE Probable ATP-dependent RNA helicase DDX4 OS=Pelophylax lessonae OX=45623 GN=ddx4 PE=2 SV=1 Length=724 Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/332 (29%), Positives = 155/332 (47%), Gaps = 54/332 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+IV P+REL Q + ++F +R ++I GG L + G +I+ T Sbjct 364 PEAIIVAPTRELINQIYLDARKFSY---GTCVRPVVIYGGTQMFHSLKQISEGCNILCAT 420 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ K+ L+++R+LVLDEAD +L G+ + I + + + + Q ++ Sbjct 421 PGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMGFREDIENLLKSSGMPSKEER--QTLMF 478 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT S ++ L+ +I+ K D L+ +G+ Sbjct 479 SATFPS-SIQSLAREIL---------------------------KPDYLFVVVGQVGGAC 510 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 DV +M E + K + + ++E ++ ++F +TK D + + Sbjct 511 SDVE------------QMVIEVDEFGKKDKLMEILQEIGSERTMVFVKTKKKADFIATFL 558 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 Q+ + +HGDR+ ER+ L F+ G ++ T VAARG+DI V Y Sbjct 559 CQE---------KVPSTSIHGDREQKERETALRDFRTGQCPVIVATSVAARGLDIENVSY 609 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 VIN +PD+ YVHRIGR GR G AIS Sbjct 610 VINFDIPDDIDEYVHRIGRTGRCGNTGRAISF 641 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + +A+ V + ++ T IQ SIP+I+ G D++ A+TGSGKT AF +P++ Sbjct 288 FEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPIL 345 >sp|Q5E8U5|RHLB_ALIF1 ATP-dependent RNA helicase RhlB OS=Aliivibrio fischeri (strain ATCC 700601 / ES114) OX=312309 GN=rhlB PE=3 SV=2 Length=432 Score = 130 bits (328), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 109/336 (32%), Positives = 164/336 (49%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I+ P+RELA Q N+ + I + L+ L GG Q V+E GVDI++GT Sbjct 85 PRAIIMAPTRELAIQIFNDAESL---IASTGLKAALAYGGERYEKQQQVIEQGVDILIGT 141 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D G ++ ++ +VLDEAD + G+ I + ++P T +RL ++ Sbjct 142 TGRIIDFYKQGHIDFKMIQAVVLDEADRMFDLGFIKDIRFIFRRMPAPT---ERLNMLF- 197 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M P HVVV KT H Sbjct 198 SATL-SYRVQELAFEHMQEP---------------EHVVVEPEQKT---------GHRIK 232 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +++ N + +L+ I+E D+AIIF TK C+++ + Sbjct 233 EELFYPSN-----------DHKMALLQT-----LIEEEWPDRAIIFANTKHKCESVWGHL 276 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK H+ L GD +R++ LE F +G+V L+ TDVAARG+ I V + Sbjct 277 -----AADK--HRVGL--LTGDVPQKKRERILEEFTQGNVDILVATDVAARGLHIPQVTH 327 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LP+E ++YVHRIGR GRA G +IS E Sbjct 328 VFNFDLPNEAEDYVHRIGRTGRAGASGNSISFACEE 363 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/53 (36%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++G+ P++ + ++ T IQA+++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAF 63 >sp|Q0HQL1|RHLB_SHESR ATP-dependent RNA helicase RhlB OS=Shewanella sp. (strain MR-7) OX=60481 GN=rhlB PE=3 SV=1 Length=439 Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/339 (31%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q VL+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDAILLAKHT---HLKVGIVYGGESYDVQRKVLDQGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G ++L+ ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRIIDYVRQGIISLNAIQAVVLDEADRMFDLGFIKDIRFLFRRMPNA---DQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S V++L+ M+ P V++ E+ + + P RL L + Sbjct 197 F-SATL-SMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKIRLLLTLIE-- 252 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 E W E +AI+F TK C+NL Sbjct 253 -------------------EDWPE--------------------KAIVFSNTKHSCENLW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + GH+ L GD +R + LE+F +G + L+ TDVAARG+ I Sbjct 274 SWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLHISD 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G+++S E Sbjct 325 VSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEE 363 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|Q0HN76|RHLB_SHESM ATP-dependent RNA helicase RhlB OS=Shewanella sp. (strain MR-4) OX=60480 GN=rhlB PE=3 SV=1 Length=439 Score = 131 bits (329), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/339 (31%), Positives = 162/339 (48%), Gaps = 59/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + K+ L+ ++ GG + Q VL+ GVDI++ Sbjct 83 NQPRAIIMAPTRELAIQIAKDAILLAKHT---HLKVGIVYGGESYDVQRKVLDQGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V G ++L+ ++ +VLDEAD + G+ I + ++P +RL ++ Sbjct 140 GTTGRIIDYVRQGIISLNAIQAVVLDEADRMFDLGFIKDIRFLFRRMPNA---DQRLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVNPKTDRLWERLGKSH 463 SATL S V++L+ M+ P V++ E+ + + P RL L + Sbjct 197 F-SATL-SMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKIRLLLTLIE-- 252 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 E W E +AI+F TK C+NL Sbjct 253 -------------------EDWPE--------------------KAIVFSNTKHSCENLW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + GH+ L GD +R + LE+F +G + L+ TDVAARG+ I Sbjct 274 SWL-------EGDGHRVGL--LTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLHISD 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +V N LPD+ ++YVHRIGR GRA G+++S E Sbjct 325 VSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEE 363 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLV 65 >sp|Q4WPE9|PRP28_ASPFU Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=prp28 PE=3 SV=1 Length=796 Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/361 (27%), Positives = 167/361 (46%), Gaps = 67/361 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q ++F + + + I+GG + +Q L NG +I++ Sbjct 441 DGPYAIVLAPTRELAQQIEIEARKFTQPLG---FNVVSIVGGHSFEEQAYSLRNGAEIII 497 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG------ 398 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P VT++ Sbjct 498 ATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALP-VTNEKPDTEEA 556 Query 399 ---------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + Q ++ +AT+ S V++++ K + P V + DTV V + Sbjct 557 ENSAAMRSHRYRQTMMYTATMPSA-VERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIA 615 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + D+ +RL D+ + RP Sbjct 616 GE-DKRKKRLA-------DILSSGEFRP------------------------------PI 637 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 I+F K +CD + + Q G FS V LHG + +R+ L + G L Sbjct 638 IVFVNIKRNCDAIAREIKQMG---------FSSVTLHGSKTQEQREAALASVRNGSTDVL 688 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TD+A RGID+ V V+N + + ++Y HRIGR GRA + G+AI+ + E V Y Sbjct 689 VATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYD 748 Query 630 V 630 + Sbjct 749 L 749 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 40/66 (61%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V+++ + PT IQ +IP+ L D++ A TGSGKT +F +P+ Sbjct 363 MRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPL 422 Query 61 IQIVYE 66 + + E Sbjct 423 LVYISE 428 >sp|Q9CJS1|RHLB_PASMU ATP-dependent RNA helicase RhlB OS=Pasteurella multocida (strain Pm70) OX=272843 GN=rhlB PE=3 SV=1 Length=423 Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 106/336 (32%), Positives = 159/336 (47%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ALI+ P+RELA Q N+ K L+ L GG QL +E GVDI++GT Sbjct 83 PRALILAPTRELAVQINNDAALLTK---ATGLKTGLAYGGDGYEKQLKAIEQGVDILIGT 139 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D V G + L +++ +VLDEAD + G+ I + + P + RL ++ Sbjct 140 TGRVIDYVKQGIVRLDKIQVVVLDEADRMFDLGFIKDIRYLLRKCP---APQHRLTMLF- 195 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M+ P +V+++ P+ R+ E L + Sbjct 196 SATL-SYKVRELAFEDMNDPEYVEIE--------------PLQKTGHRIKEEL--FYPSN 238 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D A T PE + IIF TK C+++ Y Sbjct 239 QDKMALLLTLLEEEWPE------------------------RCIIFANTKHRCEDIWGYL 274 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 GH+ L GD +R L++F +G + L+ TDVAARG+ I V + Sbjct 275 A-------ADGHRVGL--LTGDVAQKKRLSLLKQFTEGHLDILVATDVAARGLHISDVSH 325 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LPD++++YVHRIGR GRA G++IS E Sbjct 326 VFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEE 361 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + ++ A++E + T IQA S+P+ L G DV A+TG+GKT AF + Sbjct 11 FSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAF----LTA 66 Query 64 VYETLKDQQEGKKGK 78 + L QQ K G+ Sbjct 67 TFHHLLTQQGDKGGR 81 >sp|Q5QYF8|RHLB_IDILO ATP-dependent RNA helicase RhlB OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) OX=283942 GN=rhlB PE=3 SV=1 Length=425 Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 106/338 (31%), Positives = 161/338 (48%), Gaps = 57/338 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P+ALI+ P+RELA Q ++ I++ L+ +I GG Q L DI+V Sbjct 82 SGPRALIMAPTRELAIQIAHDADAL---IEHCGLKMGVIYGGEGYEGQKEQLAAQPDILV 138 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +L + +VLDEAD + G+ D I + ++P + KRL ++ Sbjct 139 GTTGRLIDFYKQDLFSLKDIEVVVLDEADRMFDLGFIDDIRYLLQKMPDPS---KRLNLL 195 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SATL S+ V++L+ + M+ PT ++ V P+ R+ E L Sbjct 196 F-SATL-SYRVQELAYEHMNAPTKLE--------------VEPLQKTATRVTEELFYP-- 237 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + PE + + + I+E D+AI+F TK C+ + Sbjct 238 ---------------SKPEKFPLLLTL---------IEEDWPDKAIVFANTKHGCEKVHG 273 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + ++ L GD +R + LE F +G + FL+ TDVAARG+ I V Sbjct 274 WLV---------ANEHRAGLLTGDVPQKKRLRILEDFAEGKLDFLVATDVAARGLHIPEV 324 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +V N LPD+ ++YVHRIGR GRA G AISL E Sbjct 325 THVYNFDLPDDCEDYVHRIGRTGRAGASGAAISLACEE 362 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++ + P+I QA+ + T IQA S+P+ L DV A+TG+GKT AF Sbjct 11 FADLALHPKIQQAISSAGFEYCTPIQALSLPVALSNRDVAGQAQTGTGKTLAF 63 >sp|Q1DMX8|PRP28_COCIM Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Coccidioides immitis (strain RS) OX=246410 GN=PRP28 PE=3 SV=2 Length=820 Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/366 (27%), Positives = 168/366 (46%), Gaps = 72/366 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNP-KLRELLIIGGVAARDQLSVLENGVDIV 343 + P A+I+ P+RELA+Q N ++F NP + I+GG + +Q L NG +I+ Sbjct 457 DGPYAIILAPTRELAQQIENEARKFC----NPLGFNVVSIVGGHSLEEQSFSLRNGAEII 512 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP--------QVT 395 + TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P + Sbjct 513 IATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEA 572 Query 396 SDGKRL-----------QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 D + + Q ++ +AT+ S V++++ K + P V + DTV Sbjct 573 EDARAMSQHLGGKDRYRQTMMYTATMPSA-VERIARKYLRRPAIVTIGNIGEAVDTVEQR 631 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V ++ + D+ +RL D+ A RP Sbjct 632 VEFISGE-DKRKKRLA-------DILASGEFRP--------------------------- 656 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 I+F K +CD + + Q G +S V LHG + +R+ L + G Sbjct 657 ---PIIVFVNIKRNCDAVARDIKQMG---------YSSVTLHGSKTQEQREAALASVRNG 704 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + L+ TD+A RGID+ V V+N + ++Y HRIGR GRA + G+AI+ + E Sbjct 705 NTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDA 764 Query 625 KVWYHV 630 V Y + Sbjct 765 DVMYDL 770 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/66 (32%), Positives = 40/66 (61%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + ++++ + P+ IQ +IP+ L D++ A TGSGKT AF +P+ Sbjct 379 MRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPL 438 Query 61 IQIVYE 66 + + E Sbjct 439 LVYIAE 444 >sp|Q2HFP1|IF4A_CHAGB ATP-dependent RNA helicase eIF4A OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=TIF1 PE=3 SV=1 Length=397 Score = 129 bits (325), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 103/358 (29%), Positives = 169/358 (47%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA+Q + +++ + IGG + RD + L++G ++VGTP Sbjct 94 QALILAPTRELAQQIQKVVIAIGDFMN---IECHACIGGTSVRDDMKALQDGPQVIVGTP 150 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L Q++ VLDEAD +LS+G+++ I + +PQ T QV++ S Sbjct 151 GRVHDMIQRRILKTDQMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST------QVVLLS 204 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ DV +++ K M P + +K ++ + + + V Sbjct 205 ATMPQ-DVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEK----------------- 246 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W + L Y I QA+IFC T+ D L Sbjct 247 ---------------EDWK--LDTLSDLYETVTIT-----QAVIFCNTRRKVDWLTDKL- 283 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD +R ++ F+ G R LI TD+ ARGID+ V V Sbjct 284 --------QARDFTVSAMHGDMDQTQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLV 335 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y+T+++E Sbjct 336 INYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFYSTQIEE 388 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/70 (33%), Positives = 41/70 (59%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + E+ + + + P+ IQ +I ++ G DV+ A++G+GKT FSI V+Q Sbjct 25 SFDDMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQ 84 Query 63 IVYETLKDQQ 72 + T+K Q Sbjct 85 KIDPTVKSCQ 94 >sp|Q0UU86|IF4A_PHANO ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=TIF1 PE=3 SV=1 Length=396 Score = 129 bits (325), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 105/360 (29%), Positives = 168/360 (47%), Gaps = 63/360 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +ALI+ P+RELA+Q + ++D + IGG + RD + L++G +VVG Sbjct 91 ACQALILAPTRELAQQIQKVVVAIGDFMD---VACHACIGGTSVRDDMKALQDGPQVVVG 147 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T QV++ Sbjct 148 TPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST------QVVL 201 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M P + +K ++ + + + V Sbjct 202 LSATMPQ-DVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVE---------------- 244 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 E W + L Y I QA+IFC T+ D L Sbjct 245 ----------------KEDWK--LDTLSDLYETVTIT-----QAVIFCNTRRKVDWLTDK 281 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F+ +HGD +R ++ F+ G R LI TD+ ARGID+ V Sbjct 282 L---------TARDFTVSAMHGDMDQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVS 332 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y+T+++E Sbjct 333 LVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFYSTQIEE 387 Score = 40.8 bits (94), Expect = 0.040, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 0/67 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + E+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI +Q Sbjct 24 SFDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQ 83 Query 63 IVYETLK 69 + +K Sbjct 84 KIDSNVK 90 >sp|Q5BCU6|PRP28_EMENI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=prp28 PE=3 SV=2 Length=782 Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/365 (26%), Positives = 166/365 (45%), Gaps = 70/365 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q K+F + + + I+GG + +Q L NG +I++ Sbjct 423 DGPYAIVLAPTRELAQQIEIEAKKFTEPLG---FNVVSIVGGHSFEEQAYSLRNGAEIII 479 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP------------ 392 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P Sbjct 480 ATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAE 539 Query 393 -------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + S + Q ++ +AT+ + V++++ K + P V + DTV V Sbjct 540 DSSAMSRHLGSKDRYRQTMMYTATMPTA-VERIARKYLRRPAIVTIGSAGEAVDTVEQRV 598 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + D+ +RLG ++ + + RP Sbjct 599 EMIAGE-DKRKKRLG-------EILSSGDFRP---------------------------- 622 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 I+F K +CD + + Q G FS V LHG + +R+ L + G Sbjct 623 --PIIVFVNIKRNCDAIAREIKQWG---------FSSVTLHGSKTQEQREAALASVRNGS 671 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TD+A RGID+ V VIN + ++Y HRIGR GRA + G+AI+ + E Sbjct 672 TDVLVATDLAGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDAD 731 Query 626 VWYHV 630 V Y + Sbjct 732 VMYDL 736 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V+ + + PT IQ +IP+ + D++ A TGSGKT AF +P+ Sbjct 345 MRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPL 404 Query 61 IQIVYE 66 + + E Sbjct 405 LCYIAE 410 >sp|A5A6J2|DDX5_PANTR Probable ATP-dependent RNA helicase DDX5 OS=Pan troglodytes OX=9598 GN=DDX5 PE=2 SV=1 Length=614 Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/338 (29%), Positives = 155/338 (46%), Gaps = 63/338 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFK-KYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 + P L++ P+RELA+Q ++Q +Y +L+ I GG Q+ LE GV+ Sbjct 166 DGPICLVLAPTRELAQQ----VQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVENC 221 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 + TPGRL D + GK NL + +LVLDEAD +L G+ I ++ + Q+ D Q Sbjct 222 IATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKI---VDQIRPD---RQT 275 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT +P V ED + D +H + + L +H Sbjct 276 LMWSAT---------------WPKEVRQLAEDFLKDYIHINIGALE---------LSANH 311 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE---HKMDQAIIFCRTKIDCD 520 N ++ + K E +R ++E K ++ I+F TK CD Sbjct 312 ----------------NILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCD 355 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + + G + + +HGD+ ER L FK G LI TDVA+RG+D Sbjct 356 ELTRKMRRDG---------WPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLD 406 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 407 VEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTF 444 Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P I Sbjct 96 FYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153 >sp|P41377|IF4A2_ARATH Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana OX=3702 GN=TIF4A-2 PE=1 SV=1 Length=412 Score = 129 bits (325), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 98/344 (28%), Positives = 159/344 (46%), Gaps = 60/344 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y ++ +GG + R+ +L+ GV +VVGTP Sbjct 109 QALVLAPTRELAQQIEKVMRALGDY---QGVKVHACVGGTSVREDQRILQAGVHVVVGTP 165 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 166 GRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 219 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M P + +K ++ + + V V Sbjct 220 ATMPP-EALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEK----------------- 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 262 ---------------EDWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 294 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 295 -----TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 349 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VIN LP + +NY+HRIGR GR R G+AI+ V + +++ + + Sbjct 350 VINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDI 393 Score = 33.9 bits (76), Expect = 5.3, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99 >sp|Q1DHB2|PRP5_COCIM Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides immitis (strain RS) OX=246410 GN=PRP5 PE=3 SV=1 Length=1197 Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/352 (28%), Positives = 167/352 (47%), Gaps = 60/352 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q K F K ++ LR + GG +DQ++ L+ G +I+V T Sbjct 633 PVGLIMTPTRELATQIHKECKPFLKALN---LRAVCAYGGAPIKDQIAELKRGAEIIVCT 689 Query 347 PGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ DL++ +G++ NL +V ++VLDEAD + G+ + ++ + I Q Sbjct 690 PGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIISNI------RPSRQT 743 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV--VVPVNPKTDRLWERLGK 461 ++ SAT +++ L+ K + P + + G V + + V P N K RL E LG Sbjct 744 VLFSATFPR-NMEALARKTLTKPVEIIVGGRSVVAQEITQIVEVRPENTKFVRLLELLG- 801 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 ++++ DN +A+IF + D Sbjct 802 ------NLYSDDNNEDA-----------------------------RALIFVDRQEAADG 826 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + +++G + C+ +HG + +R ++ FK G LI T VAARG+D+ Sbjct 827 LLRDLMRKG---------YPCMSIHGGKDQVDRDSTIDDFKAGIFPVLIATSVAARGLDV 877 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + VIN P+ ++YVHR GR GRA G A++ + E+E+ + + Sbjct 878 KQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKA 929 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 44/69 (64%), Gaps = 4/69 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +S+ G+ + + ++ + PT IQ+++IP I+ G DV+ A+TGSGKT AF +P Sbjct 561 WSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLP---- 616 Query 64 VYETLKDQQ 72 ++ +KDQ+ Sbjct 617 MFRHIKDQR 625 >sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DED1 PE=3 SV=1 Length=672 Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 156/334 (47%), Gaps = 58/334 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+REL Q + + +K+ ++ ++ GG QL +E G D++ T Sbjct 276 PSTLILAPTRELVSQIHD---EARKFTYRSWVKPAVVYGGADIVTQLRQIERGCDLLSAT 332 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVI 404 PGRL DL+ G+++LS VRFLVLDEAD +L G+ I R+ +P V Q + Sbjct 333 PGRLVDLMERGRISLSNVRFLVLDEADRMLDMGFEPQIRRIVEGEDMPGVMDR----QTL 388 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + L +D + + V V V ++ + +++ ++ Sbjct 389 MFSAT---------------FPRDIQLLAKDFLKEYVFLSVGRVGSTSENITQKI--EYV 431 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 DD S + +L ++ + +IF TK D L Sbjct 432 EDDDKR---------------SVLLDVLA------SMPSGGL--TLIFVETKRMADMLSD 468 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + ++ + +HGDR ER++ LE F+ G ++ T VAARG+DI V Sbjct 469 FLLRS---------KIGATSIHGDRTQRERERALELFRSGKTPIMVATAVAARGLDIPNV 519 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +V+N LP + +YVHRIGR GRA +G A + Sbjct 520 THVVNYDLPSDVDDYVHRIGRTGRAGNVGHATAF 553 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 0/41 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 PT +Q SIP+I G D++ A+TGSGKTG F P++ ++ Sbjct 212 PTPVQKYSIPIIKLGRDLMGCAQTGSGKTGGFLFPILSALF 252 >sp|Q2UH00|PRP28_ASPOR Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=prp28 PE=3 SV=1 Length=803 Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 96/365 (26%), Positives = 165/365 (45%), Gaps = 70/365 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q K+F + + + I+GG + +Q L NG +I++ Sbjct 444 DGPYAIVLAPTRELAQQIEIEAKKFTEPLG---FNVVSIVGGHSFEEQAYSLRNGAEIII 500 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP------------ 392 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P Sbjct 501 ATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEEAE 560 Query 393 -------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + + Q ++ +AT+ + V++++ K + P V + DTV V Sbjct 561 NSMAMSQHIGTKDRYRQTMMYTATMPTA-VERIARKYLRRPAIVTIGSAGEAVDTVEQRV 619 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + D+ +RLG D+ + RP Sbjct 620 EFIAGE-DKRKKRLG-------DILSSGEFRP---------------------------- 643 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 I+F K +CD + + Q G FS V LHG + +R+ L + G Sbjct 644 --PIIVFVNIKRNCDAIAREIKQWG---------FSSVTLHGSKTQEQREAALASVRNGQ 692 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TD+A RGID+ V VIN + ++Y HRIGR GRA + G+AI+ + E Sbjct 693 TDVLVATDLAGRGIDVPDVSLVINFNMATTIESYTHRIGRTGRAGKSGVAITFLGNEDTD 752 Query 626 VWYHV 630 V Y + Sbjct 753 VMYDL 757 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/66 (32%), Positives = 39/66 (59%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V ++ + PT IQ +IP+ + D++ A TGSGKT +F +P+ Sbjct 366 MRSWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPL 425 Query 61 IQIVYE 66 + + E Sbjct 426 LVYIAE 431 >sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0197200 PE=3 SV=2 Length=494 Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 103/336 (31%), Positives = 154/336 (46%), Gaps = 61/336 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F + K++ I GGV Q+ L+ GV+IV+ Sbjct 163 DGPIVLVLAPTRELAVQIQQEATKFGA---SSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 219 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ + NL +V +LVLDEAD +L G+ I ++ + Q+ D Q + Sbjct 220 ATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQIKKI---VSQIRPD---RQTL 273 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT +V++L+ + P V + E+ L +H Sbjct 274 YWSATWPK-EVEQLARNFLFDPYKVIIGSEE-----------------------LKANHA 309 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD--QAIIFCRTKIDCDNL 522 + V E+ SE+ K K + + E MD + +IF TK CD + Sbjct 310 ISQHV-------------EILSESQKYNK----LVNLLEDIMDGSRILIFMDTKKGCDQI 352 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + G + + +HGD+ ER L FK G + TDVAARG+D+ Sbjct 353 TRQLRMDG---------WPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVK 403 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V YVIN P ++YVHRIGR GRA G A + Sbjct 404 DVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTF 439 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/58 (38%), Positives = 36/58 (62%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++G + Q + + ++ PT IQ++ P+ L G D++ AETGSGKT A+ +P I Sbjct 93 FRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAI 150 >sp|A5DAC8|DBP3_PICGU ATP-dependent RNA helicase DBP3 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP3 PE=3 SV=2 Length=534 Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 100/341 (29%), Positives = 160/341 (47%), Gaps = 64/341 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L + P+RELA Q +N+ K N L + I GGV Q+ ++ +VV TP Sbjct 200 RVLCISPTRELALQIYDNLTMLTK---NCGLTCVAIYGGVPKDQQIKAVKTA-SVVVATP 255 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL++ G ++LS + +LVLDEAD +L +G+ + I + + K+ Q ++ + Sbjct 256 GRLVDLLNDGAVDLSTIDYLVLDEADRMLEKGFEEDIKNI------IGCTNKQRQTLMFT 309 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT--VHHVVVPVNPKTDRLWERLGKSHIR 465 AT +V++L+ M+ V + D + + V ++P+ Sbjct 310 ATWPK-EVRELAATFMNKAVKVSIGNRDELAANKRITQTVEVMDPRD------------- 355 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI-IFCRTKIDCDNLEQ 524 K ++ ++++ DQ I +F K + +E Sbjct 356 ---------------------------KERRLLQLLRQYGSDQKILVFALYKKEATRVEA 388 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G F+ +HGD +R L+ FK+GD L+ TDVAARG+DI V Sbjct 389 MLRRSG---------FNVAAIHGDLSQQQRTSALDSFKRGDSNLLLATDVAARGLDIPNV 439 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 VIN+T P ++YVHRIGR GRA + G+A +L TE EK Sbjct 440 KVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLF-TEHEK 479 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQ+ S P +L G DV+ AETGSGKT AF +P I Sbjct 152 PTPIQSASWPYLLNGDDVVGVAETGSGKTFAFGVPAI 188 >sp|P38919|IF4A3_HUMAN Eukaryotic initiation factor 4A-III OS=Homo sapiens OX=9606 GN=EIF4A3 PE=1 SV=4 Length=411 Score = 129 bits (324), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 108 QALILAPTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV++ S Sbjct 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 218 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 219 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 260 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 261 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 297 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 298 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 349 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 350 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 402 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 >sp|P0CQ80|DHH1_CRYNJ ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DHH1 PE=3 SV=1 Length=625 Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 105/348 (30%), Positives = 160/348 (46%), Gaps = 59/348 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA QT K +I P L+ ++ GG RD + L+ V I+VGTP Sbjct 106 QALILVPTRELALQTSQVCKTLGAHI--PNLQVMITTGGTTLRDDILRLQQPVHILVGTP 163 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL S G +L++ V+DEAD LLS+ + I + PQ QV++ S Sbjct 164 GRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTLALCPQ------ERQVMLFS 217 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT + VK+ ++ M P ++L D Sbjct 218 ATF-PWTVKEFKDQHMVQPYEINL----------------------------------MD 242 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 ++ K T+ A E S+ + L ++ + +++Q+IIFC + + L + Sbjct 243 ELTLKGVTQYYAYVEE--SQKVHCLNTLFS-----KLQINQSIIFCNSTNRVELLAKKVT 295 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G +SC H + R + F+ G R L+C+D+ RGIDI V V Sbjct 296 ELG---------YSCFYSHAKMQQAHRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVV 346 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 IN P ++Y+HRIGR GR +GLAISL+ E Y + S G Sbjct 347 INFDFPRTAESYLHRIGRSGRFGHLGLAISLLTLEDRHNLYRIESELG 394 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/69 (32%), Positives = 38/69 (55%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + G+ E+ + + P+ IQ ++IP+ L G D+L A+ G+GKT +F IP + Sbjct 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97 Query 64 VYETLKDQQ 72 + +L Q Sbjct 98 INTSLSHIQ 106 >sp|P0CQ81|DHH1_CRYNB ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DHH1 PE=3 SV=1 Length=625 Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 105/348 (30%), Positives = 160/348 (46%), Gaps = 59/348 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA QT K +I P L+ ++ GG RD + L+ V I+VGTP Sbjct 106 QALILVPTRELALQTSQVCKTLGAHI--PNLQVMITTGGTTLRDDILRLQQPVHILVGTP 163 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL S G +L++ V+DEAD LLS+ + I + PQ QV++ S Sbjct 164 GRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTLALCPQ------ERQVMLFS 217 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT + VK+ ++ M P ++L D Sbjct 218 ATF-PWTVKEFKDQHMVQPYEINL----------------------------------MD 242 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 ++ K T+ A E S+ + L ++ + +++Q+IIFC + + L + Sbjct 243 ELTLKGVTQYYAYVEE--SQKVHCLNTLFS-----KLQINQSIIFCNSTNRVELLAKKVT 295 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G +SC H + R + F+ G R L+C+D+ RGIDI V V Sbjct 296 ELG---------YSCFYSHAKMQQAHRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVV 346 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 IN P ++Y+HRIGR GR +GLAISL+ E Y + S G Sbjct 347 INFDFPRTAESYLHRIGRSGRFGHLGLAISLLTLEDRHNLYRIESELG 394 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/69 (32%), Positives = 38/69 (55%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + G+ E+ + + P+ IQ ++IP+ L G D+L A+ G+GKT +F IP + Sbjct 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97 Query 64 VYETLKDQQ 72 + +L Q Sbjct 98 INTSLSHIQ 106 >sp|Q4R3Q1|IF4A3_MACFA Eukaryotic initiation factor 4A-III OS=Macaca fascicularis OX=9541 GN=EIF4A3 PE=2 SV=3 Length=411 Score = 129 bits (324), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 108 QALILAPARELAVQIQKGLLTLGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV++ S Sbjct 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 218 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 219 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 260 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 261 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 297 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 298 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 349 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 350 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 402 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 >sp|Q58Z64|DHH1_CRYNH ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=VAD1 PE=1 SV=1 Length=616 Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 105/348 (30%), Positives = 159/348 (46%), Gaps = 59/348 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA QT K +I P L+ ++ GG RD + L+ V I+VGTP Sbjct 106 QALILVPTRELALQTSQVCKTLGAHI--PNLQVMITTGGTTLRDDILRLQQPVHILVGTP 163 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL S G L++ V+DEAD LLS+ + I + PQ QV++ S Sbjct 164 GRILDLGSKGIAGLNKCGIFVMDEADKLLSEDFMPVIEQTLALCPQ------ERQVMLFS 217 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT + VK+ ++ M P ++L D Sbjct 218 ATF-PWTVKEFKDQHMVQPYEINL----------------------------------MD 242 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 ++ K T+ A E S+ + L ++ + +++Q+IIFC + + L + Sbjct 243 ELTLKGVTQYYAYVEE--SQKVHCLNTLFS-----KLQINQSIIFCNSTNRVELLAKKVT 295 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G +SC H + R + F+ G R L+C+D+ RGIDI V V Sbjct 296 ELG---------YSCFYSHAKMQQAHRNRVFHDFRNGMTRNLVCSDLLTRGIDIQAVNVV 346 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 IN P ++Y+HRIGR GR +GLAISL+ E Y + S G Sbjct 347 INFDFPRTAESYLHRIGRSGRFGHLGLAISLLTLEDRHNLYRIESELG 394 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/69 (32%), Positives = 38/69 (55%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + G+ E+ + + P+ IQ ++IP+ L G D+L A+ G+GKT +F IP + Sbjct 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97 Query 64 VYETLKDQQ 72 + +L Q Sbjct 98 INTSLSHIQ 106 >sp|Q3B8Q2|IF4A3_RAT Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1 Length=411 Score = 129 bits (324), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 108 QALILAPTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV++ S Sbjct 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 218 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 219 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 260 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 261 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 297 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 298 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 349 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 350 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 402 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 >sp|A6M931|IF4A3_PIG Eukaryotic initiation factor 4A-III OS=Sus scrofa OX=9823 GN=EIF4A3 PE=2 SV=1 Length=411 Score = 129 bits (324), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 108 QALILAPTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV++ S Sbjct 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 218 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 219 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 260 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 261 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 297 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 298 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 349 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 350 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 402 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 >sp|Q2NL22|IF4A3_BOVIN Eukaryotic initiation factor 4A-III OS=Bos taurus OX=9913 GN=EIF4A3 PE=2 SV=3 Length=411 Score = 129 bits (324), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 108 QALILAPTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV++ S Sbjct 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 218 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 219 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 260 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 261 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 297 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 298 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 349 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 350 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 402 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 >sp|Q91VC3|IF4A3_MOUSE Eukaryotic initiation factor 4A-III OS=Mus musculus OX=10090 GN=Eif4a3 PE=1 SV=3 Length=411 Score = 129 bits (323), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 108 QALILAPTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 164 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV++ S Sbjct 165 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 218 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 219 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 260 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 261 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 297 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 298 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 349 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 350 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 402 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 40/70 (57%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FS+ V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQ 98 Query 63 IVYETLKDQQ 72 + +++ Q Sbjct 99 CLDIQVRETQ 108 >sp|Q89AF9|DEAD_BUCBP ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=deaD PE=3 SV=1 Length=602 Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 99/346 (29%), Positives = 154/346 (45%), Gaps = 61/346 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 P+ L++ P+RELA Q F K + + L + GG QL L G I+VG Sbjct 74 VPQILVLTPTRELAVQVAEAFSNFSKKLIGVHV--LALYGGQRYDLQLKSLRKGPQIIVG 131 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D + L+LS + LVLDEAD +L G+ + + + +IP R Q + Sbjct 132 TPGRLLDHLKRRTLSLSNLHSLVLDEADEMLRMGFIEDVETIMTEIPD------RHQTAL 185 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT+ ++++S + M P + ++ + PD + KTD L Sbjct 186 FSATMPE-AIRRISRRFMKNPKEIRIQSNITTRPDIQQSYWMVYGKKTDAL--------- 235 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +R ++ IIF RTK + + Sbjct 236 ---------------------------------IRFLEAEDFSATIIFVRTKNATLEVSE 262 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G ++ L+GD R+Q LE+ K G + LI TDVAARG+D+ + Sbjct 263 VLERYG---------YNSAALNGDMNQSLREQTLEKLKDGRLDILIATDVAARGLDVDRI 313 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 +VIN +P + ++YVHRIGR GRA R G A+ V + ++ ++ Sbjct 314 SFVINYDIPMDSESYVHRIGRTGRAGRKGKALLFVENRERRLLRNI 359 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS G+ I A+ ++ ++ P+ IQA IP ++ G DVL A+TGSGKT AF++P++ Sbjct 7 TFSSFGLNSCIITALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLL 65 >sp|Q7RV88|IF4A_NEUCR ATP-dependent RNA helicase eIF4A OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tif-1 PE=3 SV=2 Length=397 Score = 128 bits (322), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 104/360 (29%), Positives = 168/360 (47%), Gaps = 63/360 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +ALI+ P+RELA+Q + +++ + IGG + RD + L++G +VVG Sbjct 92 ACQALILAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTSVRDDMKALQDGPQVVVG 148 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T QV++ Sbjct 149 TPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST------QVVL 202 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M P + +K ++ + + + V Sbjct 203 LSATMPQ-DVLEVTTKFMREPVRILVKKDELTLEGIKQFYIAVEK--------------- 246 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 E W + L Y I QA+IFC T+ D L Sbjct 247 -----------------EEWK--LDTLSDLYETVTIT-----QAVIFCNTRRKVDWLTDK 282 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F+ +HGD +R ++ F+ G R LI TD+ ARGID+ V Sbjct 283 L---------TARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVS 333 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y+T+++E Sbjct 334 LVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFYSTQIEE 388 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/67 (36%), Positives = 41/67 (61%), Gaps = 0/67 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F EM + PE+ + + + P+ IQ +I ++ G DV+ A++G+GKT FSI V+Q Sbjct 25 SFDEMNLKPELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQ 84 Query 63 IVYETLK 69 + +LK Sbjct 85 KIDPSLK 91 >sp|A7EGL7|IF4A_SCLS1 ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=tif1 PE=3 SV=1 Length=398 Score = 128 bits (322), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 110/367 (30%), Positives = 172/367 (47%), Gaps = 65/367 (18%) Query 281 KFLPNAPK--ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K PN + ALI+ P+RELA+Q + +++ + IGG + RD + L++ Sbjct 86 KLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMN---VECHACIGGTSVRDDMKALQD 142 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 G +VVGTPGR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T Sbjct 143 GPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST--- 199 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 QV++ SAT+ DV +++ K M P + +K K + E Sbjct 200 ---QVVLLSATMPQ-DVLEVTTKFMRDPVRILVK------------------KAELTLEG 237 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 + + +I A E W + L Y I QA+IFC T+ Sbjct 238 IKQFYI--------------AVEKEDWK--LDTLSDLYETVTIT-----QAVIFCNTRRK 276 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L F+ +HGD +R ++ F+ G R LI TD+ ARG Sbjct 277 VDWLTDKL---------TARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLARG 327 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E ++ + + Sbjct 328 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDVRMMREI-----EQF 382 Query 639 YNTRLKE 645 Y+T+++E Sbjct 383 YSTQIEE 389 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 36/60 (60%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI V+Q Sbjct 26 SFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQ 85 >sp|A2QEN5|IF4A_ASPNC ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=tif1 PE=3 SV=1 Length=398 Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/360 (29%), Positives = 167/360 (46%), Gaps = 63/360 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +ALIV P+RELA+Q + +++ + IGG RD ++ L G +VVG Sbjct 93 ACQALIVAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTNVRDDMNALRAGPQVVVG 149 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ L Q++ +LDEAD +LS+G+++ I + +PQ T QV + Sbjct 150 TPGRIHDMIERRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQST------QVTL 203 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M P + +K ++ + + + V Sbjct 204 LSATMPQ-DVLEVTTKFMRDPIRILVKKQELTLEGIKQFYIAVEK--------------- 247 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 E W + L Y I QA+IFC T+ D L Sbjct 248 -----------------EEWK--LDTLSDLYETVTIT-----QAVIFCNTRRKVDWLTDK 283 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F+ +HGD + +R ++ F+ G R LI TD+ ARGID+ V Sbjct 284 L---------TARDFTVSAMHGDMEQGQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVS 334 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y+T+++E Sbjct 335 LVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFYSTQIEE 389 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/67 (36%), Positives = 39/67 (58%), Gaps = 0/67 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDSMDLKPELLRGVYAYGFERPSAIQQRAIKPIIAGHDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLK 69 + + LK Sbjct 86 KIDQELK 92 >sp|Q6CDV4|IF4A_YARLI ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=TIF1 PE=3 SV=1 Length=395 Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/336 (29%), Positives = 161/336 (48%), Gaps = 58/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ALI+ P+RELA Q + F +Y+ K+ IGG + + + V++ GV ++VGT Sbjct 91 PQALIIAPTRELAHQIQKVVLAFGEYM---KIECHACIGGTSVAEDIRVIQEGVHVIVGT 147 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D++ L ++ +LDEAD +LS+ + D I + +P+ T Q ++ Sbjct 148 PGRIHDMIERRILKTDLIKMFILDEADEMLSREFKDPIYDIFTTLPETT------QTVLL 201 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + +V ++ K M P + +K ++ + + + V Sbjct 202 SATMPA-EVLDITGKFMRDPVRILVKKDELTLEGIKQFYIDV------------------ 242 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E S ++L Y + + QA+IFC T+ D L Q Sbjct 243 ----------------EQESYKFEVLCDLY-----ETINVSQAVIFCNTRRKVDYLTQAL 281 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + F+ +HG+ + +R ++ F+ G R LI TD+ ARGID+ V Sbjct 282 TEA---------DFTVSSMHGETEQSQRDVIMKAFRTGSSRILITTDLLARGIDVQQVSL 332 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 VIN LP ++NY+HRIGR GR R G+AI+ V +E Sbjct 333 VINFDLPSNRENYIHRIGRGGRFGRKGVAINFVTSE 368 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/72 (32%), Positives = 42/72 (58%), Gaps = 0/72 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++G+ E+ + + + P+ IQ +I ++ G DVL A++G+GKT FSI Sbjct 21 VTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISA 80 Query 61 IQIVYETLKDQQ 72 +Q + E +K Q Sbjct 81 LQNIDEKIKKPQ 92 >sp|A5UDI1|RHLB_HAEIE ATP-dependent RNA helicase RhlB OS=Haemophilus influenzae (strain PittEE) OX=374930 GN=rhlB PE=3 SV=1 Length=415 Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/336 (31%), Positives = 163/336 (49%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ALI+ +RELA Q N+ + K L+ L GG QL +E GVDI++GT Sbjct 84 PRALILASTRELAVQISNDAEFLAKAC---GLKTALAYGGDGYDKQLQAIERGVDILIGT 140 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D V G + L +++ +VLDEAD + G FI + + + + RL ++ Sbjct 141 TGRVIDYVKQGVIGLDEIQVVVLDEADRMFDLG---FIRDIRYLLRKCPTPQVRLTMLF- 196 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M+ P +++++ E T H + Sbjct 197 SATL-SYKVRELAFEDMNDPEYIEIEPEQK---TGHRI---------------------- 230 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K+ +N +M + + +++ E+ R I +F TK C+ + Y Sbjct 231 -----KEELFYPSNQDKM-ALLLTLMEDEWPERCI---------VFANTKHRCEEIWGYL 275 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 GH+ L GD +R L++F GD+ L+ TDVAARG+ I V + Sbjct 276 A-------ADGHRVGL--LTGDVAQKKRLSLLKQFTDGDLDILVATDVAARGLHISDVTH 326 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LPD++++YVHRIGR GRA G++IS E Sbjct 327 VFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEE 362 Score = 40.4 bits (93), Expect = 0.057, Method: Compositional matrix adjust. Identities = 21/53 (40%), Positives = 32/53 (60%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS++ + P + + + + T IQA S+P+ L G DV A+TG+GKT AF Sbjct 11 FSDLSLHPIVRDTLAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKTMAF 63 >sp|A1SZG4|RHLB_PSYIN ATP-dependent RNA helicase RhlB OS=Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37) OX=357804 GN=rhlB PE=3 SV=1 Length=418 Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 108/339 (32%), Positives = 162/339 (48%), Gaps = 58/339 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+I+ P+RELA Q + + LR L GG Q + LE GVDI++ Sbjct 83 NQPRAIILAPTRELAIQIHKDAMVLASMSN---LRLGLAYGGEKVEIQRTKLEKGVDILI 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR D V G +++ ++ +VLDEAD + G+ I + ++P+ S RL ++ Sbjct 140 GTTGRTIDFVKQGVIDMGSIQSVVLDEADRMFDLGFIKDIRYLFRRMPEAKS---RLNML 196 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SATL S V++L+ + M+ P + ++ E V+ VN T+ L+ + I Sbjct 197 F-SATL-SHKVQELAFEHMNDPESIQIEPE---------VMTSVN-ITEELFYPSNQDKI 244 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + I+E D+AI+F TK C+ + Sbjct 245 LL------------------------------LLSLIEEDWPDKAIVFANTKHTCEKVWG 274 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Y G L GD ++R + L++F G++ L+ TDVAARG+ I V Sbjct 275 YLAGDG---------LRTGLLTGDVPQNKRLKILQQFTDGEIDILVATDVAARGLHIPKV 325 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 +V N LPD+ ++YVHRIGR GRA GLAIS A EK Sbjct 326 SHVFNFDLPDDCEDYVHRIGRTGRAGEKGLAISF-ACEK 363 Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/58 (33%), Positives = 33/58 (57%), Gaps = 1/58 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++ + + + + T IQA S+P+ L G D+ A+TG+GKT AF +P + Sbjct 11 FADLPLEKSLISGLTSQGYEYCTPIQALSLPITLTGKDIAGQAQTGTGKTLAF-LPAV 67 >sp|B5FZY7|IF4A3_TAEGU Eukaryotic initiation factor 4A-III OS=Taeniopygia guttata OX=59729 GN=EIF4A3 PE=2 SV=1 Length=410 Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 107 QALILAPTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 163 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV++ S Sbjct 164 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 217 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 218 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 259 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 260 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 296 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 297 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 348 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 349 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 401 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 38 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 97 >sp|A4RK80|PRP28_PYRO7 Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=PRP28 PE=3 SV=1 Length=674 Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/375 (28%), Positives = 168/375 (45%), Gaps = 75/375 (20%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS- 334 +VT+T+ P ALI+ P+RELA Q + +F + + +IG ++ + Sbjct 327 EVTKTE----GPYALILAPTRELATQIQAEVIKFATRMG---FTVVCLIGNKRTIEEDAF 379 Query 335 VLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ- 393 L NG +I+V TPGRL D + L LSQ ++VLDEAD ++ G+ D I+++ +P Sbjct 380 ALRNGAEIIVATPGRLVDCLERHLLVLSQCSYVVLDEADRMVDGGFEDSIHKILAALPPS 439 Query 394 ------------------VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 +T + + Q ++ SAT+ V+++++ + P V + Sbjct 440 NGKPDDRDAEDPNIMSKFLTPNLRYRQTVMYSATMPP-SVERIAKNYLKHPAMVTIGTIG 498 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 DTV +W V ++D R ++ + Sbjct 499 EAVDTVEQQA---------MW------------VVSEDERR----------NKLRAMLNT 527 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 Y + I+F TK +CD + + D K FS V LHG++ +R+ Sbjct 528 YGTGKL-------VIVFVNTKSNCDAVAK---------DLKSSSFSAVTLHGNKTQDQRE 571 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 L+ F+ G L+ TDVAARG+DI V VIN + + Y HRIGR GRA + G+A Sbjct 572 AALQSFRDGRTNVLVATDVAARGLDIPDVSLVINFNMAGTIEVYTHRIGRTGRAGKEGMA 631 Query 616 ISLVATEKEKVWYHV 630 I+ E V YH+ Sbjct 632 ITFCGPEDHGVLYHL 646 Score = 41.2 bits (95), Expect = 0.036, Method: Compositional matrix adjust. Identities = 19/62 (31%), Positives = 38/62 (61%), Gaps = 1/62 (2%) Query 4 FSEMGVMPEIAQ-AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E +P + + ++++ + PT +Q +IP+ L D++ ++TGSGKT AF +P++ Sbjct 258 FWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLIGISKTGSGKTAAFVLPMLS 317 Query 63 IV 64 + Sbjct 318 YI 319 >sp|Q5ZM36|IF4A3_CHICK Eukaryotic initiation factor 4A-III OS=Gallus gallus OX=9031 GN=EIF4A3 PE=2 SV=1 Length=412 Score = 128 bits (321), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 166/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 109 QALILAPTRELAVQIQKGLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 165 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV++ S Sbjct 166 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 219 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 220 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 262 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 298 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 299 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 350 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 351 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 403 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 40 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 99 >sp|A1D373|PRP5_NEOFI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=prp5 PE=3 SV=1 Length=1193 Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/353 (29%), Positives = 169/353 (48%), Gaps = 62/353 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + K F K ++ LR + GG +DQ++ L+ G +IVV T Sbjct 631 PIGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIKDQIAELKRGAEIVVCT 687 Query 347 PGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINR-MHNQIPQVTSDGKRLQ 402 PGR+ DL++ G++ NL +V ++VLDEAD + G+ + + M N P Q Sbjct 688 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPD-------RQ 740 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD--RLWERLG 460 ++ SAT +++ L+ K + P + + G+ V + +V N T RL E LG Sbjct 741 TVLFSATFPR-NMEALARKSLTKPIEIVVGGKSVVAPEITQIVEVRNEDTKFVRLLEILG 799 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 ++ +DD A ++ R A+IF + D Sbjct 800 --NLYSDD--ANEDAR--------------------------------ALIFVDRQEAAD 823 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + +++G + C+ +HG + +R +E FK G LI T VAARG+D Sbjct 824 TLLRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFPILIATSVAARGLD 874 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + + V+N P+ ++YVHR GR GRA G A++ + E+E+ + + Sbjct 875 VKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKA 927 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 4/69 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +S+ G+ + + + + PT IQ+++IP I+ G DV+ A+TGSGKT AF IP Sbjct 559 WSQCGLGVQTLDVIHRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIP---- 614 Query 64 VYETLKDQQ 72 ++ ++DQ+ Sbjct 615 MFRHIRDQR 623 >sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54 OS=Dictyostelium discoideum OX=44689 GN=helA PE=3 SV=1 Length=1091 Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/335 (30%), Positives = 166/335 (50%), Gaps = 36/335 (11%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ P+RELA QT +K F + +LR +LI+GG + DQ + L DI++ TP Sbjct 302 RAVILSPTRELAIQTFKVVKDFSQ---GTQLRTILIVGGDSMEDQFTDLARNPDIIIATP 358 Query 348 GRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD-GKRLQVIV 405 GRL L+ TG ++LS+V+++V DEAD L G+++ Q+ ++ S + Q ++ Sbjct 359 GRLMHHLLETG-MSLSKVQYIVFDEADRLFEMGFNE-------QLTEILSKLSENRQTLL 410 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL S V ++ P ++L + + + + T R E+LG Sbjct 411 FSATLPSLLV-DFVRAGLNNPKLINLDTDTKISENLSLSFF-----TLRHEEKLGVLLFL 464 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 D+ K P++ + ++ K IIF TK + + Sbjct 465 LKDIIYK--------KPQLPTTETTTTTTTNNESNQQQQKKSSTIIFVSTKYHVEFI-HI 515 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +++ G + +HG P RK NL +F+ V ++ TD+AARGIDI + Sbjct 516 LLERAG--------IASTYIHGYLDPVARKINLAKFRSHQVGVMVVTDLAARGIDIPLLD 567 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 VIN P +++ ++HR+GRV RA R G+A SLV+ Sbjct 568 NVINFDFPPKEKIFIHRVGRVARAGRSGIAYSLVS 602 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 40/59 (68%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + +A+ + + +PT IQ +SIP+IL G D++ A TGSGKTGAF IP+IQ Sbjct 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQ 290 >sp|Q4WT99|PRP5_ASPFU Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=prp5 PE=3 SV=1 Length=1211 Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 103/353 (29%), Positives = 169/353 (48%), Gaps = 62/353 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + K F K ++ LR + GG +DQ++ L+ G +IVV T Sbjct 649 PIGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIKDQIAELKRGAEIVVCT 705 Query 347 PGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINR-MHNQIPQVTSDGKRLQ 402 PGR+ DL++ G++ NL +V ++VLDEAD + G+ + + M N P Q Sbjct 706 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPD-------RQ 758 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD--RLWERLG 460 ++ SAT +++ L+ K + P + + G+ V + +V N T RL E LG Sbjct 759 TVLFSATFPR-NMEALARKSLTKPIEIVVGGKSVVAPEITQIVEVRNEDTKFVRLLEILG 817 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 ++ +DD A ++ R A+IF + D Sbjct 818 --NLYSDD--ANEDAR--------------------------------ALIFVDRQEAAD 841 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + +++G + C+ +HG + +R +E FK G LI T VAARG+D Sbjct 842 TLLRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLD 892 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + + V+N P+ ++YVHR GR GRA G A++ + E+E+ + + Sbjct 893 VKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKA 945 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 4/69 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +S+ G+ + ++++ + PT IQ+++IP I+ G DV+ A+TGSGKT AF IP Sbjct 577 WSQCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIP---- 632 Query 64 VYETLKDQQ 72 ++ ++DQ+ Sbjct 633 MFRHIRDQR 641 >sp|A3LQW7|DBP2_PICST ATP-dependent RNA helicase DBP2 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP2 PE=3 SV=1 Length=530 Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/320 (31%), Positives = 150/320 (47%), Gaps = 57/320 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q ++ K+ + ++R + GG Q+ L GV+IV+ Sbjct 169 DGPVVLVLAPTRELAVQIQ---QECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEIVI 225 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 226 ATPGRLIDMLEMGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 279 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SAT +V+ L+ + P V + E + T+ VV ++ R +RL K H Sbjct 280 MWSATWPK-EVQNLARDYLQDPIQVRIGSLELAASHTITQVVEVISEYEKR--DRLVK-H 335 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + T KE K+ +IF TK CD + Sbjct 336 LETATTE-------------------------------KESKV---LIFASTKKTCDEVT 361 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 Y G + + +HGD++ ER L FK G ++ TDVAARGID+ G Sbjct 362 SYLRADG---------WPALAIHGDKQQSERDWVLREFKTGKSPIMVATDVAARGIDVKG 412 Query 584 VPYVINVTLPDEKQNYVHRI 603 + +VIN +P ++YVHRI Sbjct 413 INFVINFDMPGNIEDYVHRI 432 Score = 40.8 bits (94), Expect = 0.045, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 96 ITTFDEAGFPEYVLNEVKAQGFPSPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPA 155 Query 61 I 61 I Sbjct 156 I 156 >sp|A6RJ45|IF4A_BOTFB ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=tif1 PE=3 SV=1 Length=398 Score = 127 bits (319), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 109/367 (30%), Positives = 172/367 (47%), Gaps = 65/367 (18%) Query 281 KFLPNAPK--ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K PN + ALI+ P+RELA+Q + +++ + IGG + RD + L++ Sbjct 86 KLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMN---VECHACIGGTSVRDDMKALQD 142 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 G +VVGTPGR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T Sbjct 143 GPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST--- 199 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 QV++ SAT+ DV +++ K M P + +K K + E Sbjct 200 ---QVVLLSATMPQ-DVLEVTTKFMRDPVRILVK------------------KAELTLEG 237 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 + + +I A E W + L Y I QA+IFC T+ Sbjct 238 IKQFYI--------------AVEKEDWK--LDTLSDLYETVTIT-----QAVIFCNTRRK 276 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L F+ +HGD +R ++ F+ G R LI TD+ ARG Sbjct 277 VDWLTDKL---------TARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLARG 327 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 328 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQF 382 Query 639 YNTRLKE 645 Y+T+++E Sbjct 383 YSTQIEE 389 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 36/60 (60%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI V+Q Sbjct 26 SFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQ 85 >sp|Q6CCZ1|PRP5_YARLI Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=PRP5 PE=3 SV=1 Length=974 Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 101/358 (28%), Positives = 171/358 (48%), Gaps = 50/358 (14%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +I+ P+REL Q +++ F ++ L + GG +DQ++ L+ G I+V T Sbjct 460 PLGVIITPTRELCVQIYRDLRPFLAALE---LTAVCAYGGSPIKDQIAALKKGTHIIVCT 516 Query 347 PGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ DL++ + L+LS+V FLV+DEAD + G+ + ++ I Q Sbjct 517 PGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDMGFEPQVLKLTQSI------RPDRQT 570 Query 404 IVCSATLHSFDVKKLSEKIMHF-------PTWVDLKGEDSVPDTVHHVV-VPVNPKTD-- 453 ++ SAT +++L+ +++ P + + V + V V N K+ Sbjct 571 VLFSATFPK-KMEQLARRVLSKRSSDSLGPIEIIVGARSVVASEITQFVEVFQNEKSKFP 629 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 RL E LGK + + R G GE A I K +IF Sbjct 630 RLLEVLGK-YFAQGFFDEQSEGRVGT--------------GESAATPIPNPK---CLIFV 671 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 + D+L + IQ G + C+ +HG ++ +R Q + FK G V LI T Sbjct 672 ERQESADSLLKELIQSG---------YPCLSIHGGKEQADRDQAISDFKSGLVSVLIATS 722 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 VAARG+D+ G+ V+N P+ ++YVHR+GR GRA + G A++ + +++E++ + Sbjct 723 VAARGLDVKGLGLVVNWDSPNHMEDYVHRVGRTGRAGQKGTALTFLLSDQERLAAEIS 780 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 5/86 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ ++++G+ + ++ + PT IQA++IP ++ G DV+ A+TGSGKT AF +P+ Sbjct 377 ISKWTQLGLPGPTMGVLNDLRYDKPTSIQAQAIPAVMSGRDVISVAKTGSGKTLAFLLPM 436 Query 61 IQIVYETLKDQQEGKKGKTTIKTGAS 86 ++ + + G + TT +GAS Sbjct 437 LRHIKHRV-----GVETHTTTLSGAS 457 >sp|Q0D1K3|PRP5_ASPTN Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=prp5 PE=3 SV=1 Length=1181 Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/353 (28%), Positives = 170/353 (48%), Gaps = 62/353 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + K F K ++ LR + GG +DQ++ L+ G +IVV T Sbjct 623 PIGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIKDQIAELKRGAEIVVCT 679 Query 347 PGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINR-MHNQIPQVTSDGKRLQ 402 PGR+ DL++ G++ NL +V ++VLDEAD + G+ + + M N P Q Sbjct 680 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANVRPD-------RQ 732 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN--PKTDRLWERLG 460 ++ SAT +++ L+ K ++ P + + G+ V + +V N K RL E LG Sbjct 733 TVLFSATFPR-NMEALARKTLNKPVEIVVGGKSVVAPEITQIVEVRNEDKKFVRLLELLG 791 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 ++++ D E++ +A+IF + D Sbjct 792 -------NLYSSD-----------------------------ENEDARALIFVERQEAAD 815 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + +++G + C+ +HG + +R +E FK G LI T VAARG+D Sbjct 816 TLLRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLD 866 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + + V+N P+ ++YVHR GR GRA G A++ + ++E+ + + Sbjct 867 VKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERFSVDIAKA 919 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/69 (38%), Positives = 44/69 (64%), Gaps = 4/69 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +S+ G+ + ++ + + PT IQ+++IP I+ G DV+ A+TGSGKT AF IP Sbjct 551 WSQCGLGVQTLDVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIP---- 606 Query 64 VYETLKDQQ 72 ++ +KDQ+ Sbjct 607 MFRHIKDQR 615 >sp|A1CHL3|PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=prp28 PE=3 SV=1 Length=798 Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 96/361 (27%), Positives = 165/361 (46%), Gaps = 67/361 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q K+F + + + I+GG + +Q L NG +I++ Sbjct 443 DGPYAIVLAPTRELAQQIEIEAKKFTQPLG---FNVVSIVGGHSLEEQAYSLRNGAEIII 499 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG------ 398 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P VT++ Sbjct 500 ATPGRLVDCIERRILVLSQCCYIIMDEADRMIDLGFEEPVNKILDALP-VTNEKPDSDEA 558 Query 399 ---------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + Q ++ +AT+ S V++++ K + P V + DTV V + Sbjct 559 ENSAAMRSHRYRQTMMYTATMPSA-VERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIA 617 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + D+ +RL D+ + RP Sbjct 618 GE-DKRKKRLA-------DILSSGEFRP------------------------------PI 639 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 I+F K +CD + + G FS V LHG + +R+ L + G L Sbjct 640 IVFVNIKRNCDAIAREIKHMG---------FSSVTLHGSKTQDQREAALASVRNGSTDVL 690 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TD+A RGID+ V V+N + ++Y HRIGR GRA + G+AI+ + E V Y Sbjct 691 VATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYD 750 Query 630 V 630 + Sbjct 751 L 751 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V+ + + PT IQ +IP+ L D++ A TGSGKT +F +P+ Sbjct 365 MRSWEESGLPKRLLELVDRVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPL 424 Query 61 IQIVYE 66 + + E Sbjct 425 LVYIAE 430 >sp|Q2U2J6|PRP5_ASPOR Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=prp5 PE=3 SV=1 Length=1186 Score = 131 bits (330), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 94/350 (27%), Positives = 171/350 (49%), Gaps = 56/350 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + K F K ++ LR + GG +DQ++ L+ G +I+V T Sbjct 628 PVGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIKDQIADLKRGAEIIVCT 684 Query 347 PGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ DL++ G++ NL +V ++VLDEAD + G+ + ++ + V D Q Sbjct 685 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI---LANVRPDK---QT 738 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT +++ L+ K ++ P + + G V + +V Sbjct 739 VLFSATFPR-NMEALARKTLNKPVEIVVGGRSVVAPEITQIV-----------------E 780 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +R++D + + +++L Y+ E++ +A+IF + D L Sbjct 781 VRSED--------------KKFIRLLELLGNLYST---DENEDARALIFVERQEGADTLL 823 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + +++G + C+ +HG + +R +E FK G LI T VAARG+D+ Sbjct 824 RELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQ 874 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + V+N P+ ++YVHR GR GRA G A++ + ++E+ + + Sbjct 875 LKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKA 924 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/72 (38%), Positives = 46/72 (64%), Gaps = 4/72 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ +S+ G+ + ++ + + PT IQA++IP I+ G DV+ A+TGSGKT AF IP Sbjct 553 VSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIP- 611 Query 61 IQIVYETLKDQQ 72 ++ +KDQ+ Sbjct 612 ---MFRHIKDQR 620 >sp|A4QVP2|IF4A_PYRO7 ATP-dependent RNA helicase eIF4A OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=TIF1 PE=3 SV=1 Length=396 Score = 127 bits (318), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 103/358 (29%), Positives = 167/358 (47%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA+Q + +++ + IGG + RD + L++G +VVGTP Sbjct 93 QALILAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTSVRDDMKALQDGPQVVVGTP 149 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T QV++ S Sbjct 150 GRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST------QVVLLS 203 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ DV +++ K M P + +K ++ + + + V Sbjct 204 ATMPQ-DVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEK----------------- 245 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W + L Y I QA+IFC T+ D L Sbjct 246 ---------------EEWK--LDTLSDLYETVTIT-----QAVIFCNTRRKVDWLTDKL- 282 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 F+ +HGD +R ++ F+ G R LI TD+ ARGID+ V V Sbjct 283 --------TARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLV 334 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y+T+++E Sbjct 335 INYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFYSTQIEE 387 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F EM + E+ + + + P+ IQ +I ++ G DV+ A++G+GKT FSI V+Q Sbjct 24 SFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQ 83 >sp|P34580|DDX47_CAEEL Putative ATP-dependent RNA helicase T26G10.1 OS=Caenorhabditis elegans OX=6239 GN=T26G10.1 PE=3 SV=1 Length=489 Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 113/414 (27%), Positives = 174/414 (42%), Gaps = 79/414 (19%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P A L++ P+RELA Q +QF+ L +I+GGV Q L I+ Sbjct 110 PQAFFCLVLTPTRELAFQIG---QQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHII 166 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T NL ++FL++DEAD +L+ + ++++ IP + + Sbjct 167 VATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIP------RERR 220 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLG 460 + SAT+ + V KL + P V + D + H++ VP Sbjct 221 TYLFSATM-TKKVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNK----------- 268 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K Y V + EH + AI+FC T Sbjct 269 -------------------------------YKETYLVYLLNEHAGNSAIVFCATCATTM 297 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + Q G V LHG +R +L +FK L+CTDVAARG+D Sbjct 298 QIAVMLRQLG---------MQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLD 348 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 I V VIN +P + ++YVHR+GR RA R G+AI++V + + + ++ GK Sbjct 349 IPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLGKKLDE 408 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 + E NE+ +L E + + ++ + E D K G+KR Sbjct 409 YKCVE--------NEVMVLVE-------RTQEATENARIEMKEMDEKKKSGKKR 447 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+E+GV + A + + W+ P+ IQ ++P L G DV+ AETGSGKTGAF+IPV+Q Sbjct 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104 >sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helicase prp11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp11 PE=1 SV=1 Length=1014 Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/352 (27%), Positives = 162/352 (46%), Gaps = 62/352 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q K F K ++ +R GG +DQ++ L+ G +IVV T Sbjct 492 PIAIIMTPTRELAVQIFRECKPFLKLLN---IRACCAYGGAPIKDQIADLKRGAEIVVCT 548 Query 347 PGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ D++S G++ NL + +LVLDEAD + G+ + R+ N I Q Sbjct 549 PGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNI------RPDRQT 602 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV--VVPVNPKTDRLWERLGK 461 ++ SAT ++ L+ K++ P + + G V V + V P K RL E LG Sbjct 603 VLFSATFPRA-MEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLLELLG- 660 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 E+++ + + + ++F + D Sbjct 661 ---------------------ELYNNQLDV----------------RTLVFVDRQESADA 683 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L +++G ++ +HG + H+R + +K G LI T V ARG+D+ Sbjct 684 LLSDLMKRG---------YTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDV 734 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + V+N P+ ++YVHR+GR GRA G+A++ + E+EK + + Sbjct 735 KSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKA 786 Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/81 (36%), Positives = 48/81 (59%), Gaps = 4/81 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++S+ G+ + + + + PT IQA++IP I G DV+ A+TGSGKT AF +P Sbjct 417 VTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLP- 475 Query 61 IQIVYETLKDQQEGKKGKTTI 81 ++ +KDQ+ K G+ I Sbjct 476 ---MFRHIKDQRPLKTGEGPI 493 >sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=prp5 PE=3 SV=1 Length=1192 Score = 131 bits (330), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 102/353 (29%), Positives = 168/353 (48%), Gaps = 62/353 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + K F K ++ LR + GG +DQ++ L+ G +IVV T Sbjct 631 PIGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIKDQIADLKRGAEIVVCT 687 Query 347 PGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINR-MHNQIPQVTSDGKRLQ 402 PGR+ DL++ G++ NL +V ++VLDEAD + G+ + + M N P Q Sbjct 688 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPD-------RQ 740 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD--RLWERLG 460 ++ SAT +++ L+ K + P + + G V + +V N T RL E LG Sbjct 741 TVLFSATFPR-NMEALARKALTKPIEIIVGGRSVVAPEITQIVEVRNEDTKFVRLLEILG 799 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 ++ +DD A ++ R ++IF + D Sbjct 800 --NLYSDD--ANEDAR--------------------------------SLIFVERQEAAD 823 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + +++G + C+ +HG + +R +E FK G LI T VAARG+D Sbjct 824 ALLRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLD 874 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + + V+N P+ ++YVHR GR GRA G A++ + E+E+ + + Sbjct 875 VKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKA 927 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 44/69 (64%), Gaps = 4/69 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +S+ G+ + +E + + PT IQ+++IP I+ G DV+ A+TGSGKT AF IP Sbjct 559 WSQCGLGVQALDVIERLGYESPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIP---- 614 Query 64 VYETLKDQQ 72 ++ +KDQ+ Sbjct 615 MFRHIKDQR 623 >sp|A4RN46|PRP5_PYRO7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=PRP5 PE=3 SV=1 Length=1012 Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 160/343 (47%), Gaps = 62/343 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + K F K + LR + GG +DQ++ L+ G +IVV T Sbjct 452 PIGLILTPTRELAVQIFRDCKPFLKTLG---LRAVCAYGGPPIKDQIADLKRGAEIVVAT 508 Query 347 PGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 GR+ DL++ + ++L + ++VLDEAD + G+ + ++ + Q Sbjct 509 TGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIFANV------RPDRQT 562 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT--DRLWERLGK 461 ++ SAT+ + L +K++ P +++ G+ V + +V + K+ +RL E LG+ Sbjct 563 VLFSATMPKI-MDALVKKVLKNPVEIEVGGKSVVASEITQIVEIRDEKSKFNRLLELLGE 621 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + DDV +++IF + D Sbjct 622 LYKDDDDV--------------------------------------RSLIFVERQEKADE 643 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + +++G + C+ LHG + +R + FK G +I T VAARG+D+ Sbjct 644 LLRELLRKG---------YGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARGLDV 694 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + V+N P+ ++YVHR GR GRA G A++ V E+E Sbjct 695 KQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEEQE 737 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/65 (37%), Positives = 42/65 (65%), Gaps = 4/65 (6%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 G+ I + ++++ PT IQ +++P+I+ G DV+ A+TGSGKT AF +P ++ Sbjct 384 GLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFLLP----MFRH 439 Query 68 LKDQQ 72 +KDQ+ Sbjct 440 IKDQE 444 >sp|Q0E2Z7|RH41_ORYSJ DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0201900 PE=2 SV=2 Length=536 Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 95/345 (28%), Positives = 160/345 (46%), Gaps = 59/345 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+REL Q K K + + L++GG Q+ +ENG++++VGT Sbjct 213 PLAIVLAPTRELCLQVEEQAKVLGKGL---PFKTALVVGGDPLAQQIYRIENGIELIVGT 269 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ ++L++V VLDE D LL +G+ D Q+ Q+ QV++ Sbjct 270 PGRLIDLLMKHNVDLNKVDVFVLDEVDCLLERGFRD-------QVMQIFQALSHPQVMMF 322 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD-TVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT++S +V+K+S + + G S P+ +V VV+ Sbjct 323 SATVNS-EVEKMSNSLAKNAIHISC-GNPSRPNKSVKQVVI------------------- 361 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 W E+ + + + + K+H A++F ++I D L + Sbjct 362 -------------------WVESKQKKQKIFEIMTSKQHFKPPAVVFVSSRIGADLLSEA 402 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 G V +HGD+ +ER+++L RF G+V ++CT V RG+D+ V Sbjct 403 ITVATG--------LKVVSIHGDKTMNERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVR 454 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VI +P+ YVH++GR R G+AI V E ++ + Sbjct 455 QVILFDMPNSIDEYVHQVGRASRMGVEGMAIVFVNEEDRNLFREL 499 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 0/81 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS G+ ++ +E +++PT +Q + IP + +L++A+TGSGKT +F +P+ Sbjct 136 IMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPI 195 Query 61 IQIVYETLKDQQEGKKGKTTI 81 I ++ K+G I Sbjct 196 IAHCSHVRSERCTDKQGPLAI 216 >sp|Q6C024|PRP28_YARLI Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=PRP28 PE=3 SV=1 Length=575 Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 91/360 (25%), Positives = 166/360 (46%), Gaps = 65/360 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P LI+ P+RELA Q + +F + + + ++GG +A++Q ++ G +++V Sbjct 238 NGPYGLILAPTRELAMQIKDEAVKFCAPLG---FKVVSVVGGYSAQEQALAVQEGAELIV 294 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ----------- 393 TPGRL D++ L L+Q ++V+DEAD ++ G+ + + ++ +P Sbjct 295 ATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLASLPSSNAKPDSDEAE 354 Query 394 ---VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 S + Q ++ +AT+ ++KL++K + P V + TV +V +N Sbjct 355 NLAAVSTRRYRQTMMYTATM-PVAIEKLAKKYLRRPGIVTIGSAGQAGSTVTQLVEFLN- 412 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 TD +R R D+ +K RP + Sbjct 413 -TDEKRKR------RLLDIISKRQYRP------------------------------PIV 435 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 +F K DC+ + + G + +HG ++ +R+Q ++ K+G V L+ Sbjct 436 VFLNYKRDCEAVSDALVAAG---------WRTAIIHGGKQQEQREQAVQHLKRGAVDVLV 486 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 TDVA RG+DI V V+N + + ++Y HRIGR GRA + G A++ + E + V + + Sbjct 487 ATDVAGRGLDIPNVSLVVNFQMANNIESYTHRIGRTGRAGKRGTAVTFLGQEDDDVLFEL 546 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 44/76 (58%), Gaps = 1/76 (1%) Query 1 MAAFSEMGVMPEIAQ-AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +++E +P I + + M + PT IQ +IP+ LG DV+ AETGSGKT +F IP Sbjct 161 LRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIP 220 Query 60 VIQIVYETLKDQQEGK 75 +I + E K + K Sbjct 221 LISYICELPKLDERSK 236 >sp|A7TGU7|DHH1_VANPO ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DHH1 PE=3 SV=1 Length=484 Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 147/336 (44%), Gaps = 62/336 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT ++ K+ + ++ GG RD + L V I+V Sbjct 101 NKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTNLRDDILRLNETVHILV 157 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL S +LS+ ++DEAD +LS+ + I ++ +P K Q + Sbjct 158 GTPGRVLDLASRKVADLSECNLFIMDEADKMLSRDFKSIIEQILVFLP------KNHQSL 211 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD-TVHHVVVPVNPKTDRLWERLGKSH 463 + SAT VK+ +H P ++L E ++ T ++ V K L K Sbjct 212 LFSATF-PLSVKEFMVNHLHKPYEINLMDELTLKGITQYYAFVEEKQKLHCLNTLFSKLQ 270 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I +QAIIFC + + L Sbjct 271 I------------------------------------------NQAIIFCNSTNRVELLA 288 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G +SC H K ER + F++G VR L+C+D+ RGIDI Sbjct 289 KKITDLG---------YSCYYSHARMKQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQA 339 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V VIN P + Y+HRIGR GR +GLAI+L+ Sbjct 340 VNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI 375 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 36/62 (58%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 35 TFEDFYLKRELLMGIFEAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTAAFVIPTLE 94 Query 63 IV 64 V Sbjct 95 KV 96 >sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=prp5 PE=3 SV=2 Length=1180 Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/351 (27%), Positives = 169/351 (48%), Gaps = 58/351 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + K F K ++ LR + GG +DQ++ L+ G +I+V T Sbjct 621 PVGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIKDQIADLKRGAEIIVCT 677 Query 347 PGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINR-MHNQIPQVTSDGKRLQ 402 PGR+ DL++ G++ NL +V ++VLDEAD + G+ + + M N P Q Sbjct 678 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPD-------RQ 730 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SAT +++ L+ K + P + + G+ V + +V Sbjct 731 TVLFSATFPR-NMEALARKTLTKPIEIVVGGKSVVAPEITQIV----------------- 772 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 +R DD + + +++L Y+ E++ +A+IF + D L Sbjct 773 EVRNDD--------------QKFVRLLELLGNLYSS---DENEDARALIFVDRQEAADAL 815 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + +++G + C+ +HG + +R +E FK G LI T VAARG+D+ Sbjct 816 LRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVK 866 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + V+N P+ ++YVHR GR GRA G A++ + ++E+ + + Sbjct 867 QLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKA 917 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/69 (38%), Positives = 44/69 (64%), Gaps = 4/69 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +S+ G+ + ++++ + T IQA++IP I+ G DV+ A+TGSGKT AF IP Sbjct 549 WSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIP---- 604 Query 64 VYETLKDQQ 72 ++ +KDQ+ Sbjct 605 MFRHIKDQR 613 >sp|A6R3R5|IF4A_AJECN ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=TIF1 PE=3 SV=1 Length=385 Score = 126 bits (316), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 103/337 (31%), Positives = 159/337 (47%), Gaps = 58/337 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +ALI+ P+RELA+Q + ++ + IGG++ R+ + L++G +VVG Sbjct 93 ACQALILAPTRELAQQIQKVVVAIGDFM---SIECHACIGGISVREDMKALQDGPQVVVG 149 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ L ++ VLDEAD +LS G+++ I + +PQ T QV++ Sbjct 150 TPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSHGFTEQIYDIFQFLPQST------QVVL 203 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M P + +K K + E + + +I Sbjct 204 LSATMPQ-DVLEVTTKFMRDPVRILVK------------------KAELTLEGIKQFYI- 243 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 A E W + L Y I QA+IFC T+ D L Sbjct 244 -------------AVEKEEWK--LDTLSDLYETVTIT-----QAVIFCNTRRKVDWLTDK 283 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F+ +HGD + +R ++ F+ G R LI TD+ ARGID+ V Sbjct 284 L---------TARDFTVSAMHGDMEQQQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVS 334 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 VIN LP ++NY+HRIGR GR R G+AI+ V + Sbjct 335 LVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAD 371 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 0/67 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + E+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLK 69 V LK Sbjct 86 KVDTNLK 92 >sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=PRP5 PE=3 SV=1 Length=1072 Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 108/423 (26%), Positives = 192/423 (45%), Gaps = 94/423 (22%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA Q + F K ++ +R +GG + + ++ ++ G ++V+ T Sbjct 477 PIAVVMSPTRELASQIYKECQPFLKVLN---IRASCCVGGSSISEDIAAMKKGAEVVICT 533 Query 347 PGRLDDLVSTGKLNLSQVR---FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ DL++ ++ VR ++V+DEAD + G+ + ++ N + Q Sbjct 534 PGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNV------RPSAQK 587 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT ++ L+ +I+ P + + G SV V P+ D+ E Sbjct 588 VLFSATFPKT-MESLARRILVKPLEITVGGR-SV----------VAPEIDQRVE------ 629 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD---QAIIFCRTKIDCD 520 +R D ++ ++IL GE +EHK + + +IF + D Sbjct 630 VRDGDTK--------------FTRLLEIL-GEMG----EEHKDEDDFRTLIFVDRQESAD 670 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +L + +Q+G + C LHG ++ +R + ++ FK GDV ++ T VAARG+D Sbjct 671 DLFRELLQRG---------YVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLD 721 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 + + VIN P+ ++YVHR GR GRA G I+ + E+E+ + + Sbjct 722 VKELKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDIVRA------- 774 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGS 700 L + + + D+K D F GK+ G+ RAAG G Sbjct 775 -------------------------LEASKAFIPDDLKKMSDSFLGKIKSGKARAAGSG- 808 Query 701 YKG 703 Y G Sbjct 809 YSG 811 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 0/45 (0%) Query 22 WLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 W PT IQA++IP I+ G DV+ A+TGSGKT AF +P+++ V + Sbjct 423 WETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRD 467 >sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=PRP5 PE=3 SV=1 Length=1072 Score = 131 bits (329), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 108/423 (26%), Positives = 192/423 (45%), Gaps = 94/423 (22%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA Q + F K ++ +R +GG + + ++ ++ G ++V+ T Sbjct 477 PIAVVMSPTRELASQIYKECQPFLKVLN---IRASCCVGGSSISEDIAAMKKGAEVVICT 533 Query 347 PGRLDDLVSTGKLNLSQVR---FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ DL++ ++ VR ++V+DEAD + G+ + ++ N + Q Sbjct 534 PGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNV------RPSAQK 587 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT ++ L+ +I+ P + + G SV V P+ D+ E Sbjct 588 VLFSATFPKT-MESLARRILVKPLEITVGGR-SV----------VAPEIDQRVE------ 629 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD---QAIIFCRTKIDCD 520 +R D ++ ++IL GE +EHK + + +IF + D Sbjct 630 VRDGDTK--------------FTRLLEIL-GEMG----EEHKDEDDFRTLIFVDRQESAD 670 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +L + +Q+G + C LHG ++ +R + ++ FK GDV ++ T VAARG+D Sbjct 671 DLFRELLQRG---------YVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLD 721 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 + + VIN P+ ++YVHR GR GRA G I+ + E+E+ + + Sbjct 722 VKELKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDIVRA------- 774 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGS 700 L + + + D+K D F GK+ G+ RAAG G Sbjct 775 -------------------------LEASKAFIPDDLKKMSDSFLGKIKSGKARAAGSG- 808 Query 701 YKG 703 Y G Sbjct 809 YSG 811 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 0/45 (0%) Query 22 WLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 W PT IQA++IP I+ G DV+ A+TGSGKT AF +P+++ V + Sbjct 423 WETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRD 467 >sp|Q0CLX0|PRP28_ASPTN Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=prp28 PE=3 SV=1 Length=783 Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 96/369 (26%), Positives = 163/369 (44%), Gaps = 74/369 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q K+F + + I+GG + +Q L NG +I++ Sbjct 420 DGPYAIVLAPTRELAQQIEIEAKKFTIPLG---FTVVSIVGGHSLEEQAYSLRNGAEIII 476 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS-------- 396 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P Sbjct 477 ATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSDAAE 536 Query 397 ---------------DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 D + Q ++ +AT+ + V++++ K + P V + DTV Sbjct 537 NAAAMSQLHHAGGGRDTRYRQTMMYTATMPTA-VERIARKYLRRPAIVTIGSAGEAVDTV 595 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 V + + D+ +RLG D+ + RP Sbjct 596 EQRVELIAGE-DKRKKRLG-------DILSSGEFRP------------------------ 623 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 I+F K +CD + + Q G FS V LHG + +R+ L Sbjct 624 ------PIIVFVNIKRNCDAIAREIKQWG---------FSSVTLHGSKTQEQREAALASV 668 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + G L+ TD+A RGID+ V V+N + ++Y HRIGR GRA + G+AI+ + Sbjct 669 RNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGN 728 Query 622 EKEKVWYHV 630 E V Y + Sbjct 729 EDADVMYDL 737 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 38/66 (58%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M +++E G+ + V + + PT IQ +IP+ + D++ A TGSGKT AF +P+ Sbjct 342 MRSWAESGLPSRLLDLVHRVGYKDPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPL 401 Query 61 IQIVYE 66 + + E Sbjct 402 LVYIAE 407 >sp|P0CQ88|PRP28_CRYNJ Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=PRP28 PE=3 SV=1 Length=738 Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 102/360 (28%), Positives = 169/360 (47%), Gaps = 68/360 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+RELA+Q ++F + + + I+GG + +Q L +G +I++ T Sbjct 392 PYALIMAPTRELAQQIETETRRFALPLG---YKCVSIVGGRSVEEQQFALRDGAEIIIAT 448 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP------------QV 394 PGRL D+V L +SQ R++V+DEAD ++ G+ +N + + +P Q Sbjct 449 PGRLKDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQP 508 Query 395 TSDGK----RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 T +G+ R+ + SAT+ V++L+ K + P V + DTV Sbjct 509 TKEGEWQGWRVTTLF-SATMPPA-VERLARKYLIKPATVVIGNAGEAVDTVEQ------- 559 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 R + VH + + + I+IL+ I I Sbjct 560 --------------RVEFVHGDEKKK---------ARLIEILRTIGLPPPI--------I 588 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 +F K D + +Y +QQ G S V LH + +R+ L+ + G++ L+ Sbjct 589 VFVNQKKTADMVVKY-VQQAG--------MSGVTLHSGKSQEQREAALQALRDGEISVLV 639 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 TD+A RGID+ V VIN + D + YVHRIGR GRA + G+AI+ + + ++V Y + Sbjct 640 ATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDDDEVMYDL 699 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + E + +I +EE+ + P+ IQ ++IP+ + D++ A+TGSGKT AF IP++ Sbjct 317 WRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDY 376 Query 64 V 64 + Sbjct 377 I 377 >sp|P0CQ89|PRP28_CRYNB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=PRP28 PE=3 SV=1 Length=738 Score = 130 bits (327), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 102/360 (28%), Positives = 169/360 (47%), Gaps = 68/360 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+RELA+Q ++F + + + I+GG + +Q L +G +I++ T Sbjct 392 PYALIMAPTRELAQQIETETRRFALPLG---YKCVSIVGGRSVEEQQFALRDGAEIIIAT 448 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP------------QV 394 PGRL D+V L +SQ R++V+DEAD ++ G+ +N + + +P Q Sbjct 449 PGRLKDMVDKSILVMSQCRYVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQP 508 Query 395 TSDGK----RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 T +G+ R+ + SAT+ V++L+ K + P V + DTV Sbjct 509 TKEGEWQGWRVTTLF-SATMPPA-VERLARKYLIKPATVVIGNAGEAVDTVEQ------- 559 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 R + VH + + + I+IL+ I I Sbjct 560 --------------RVEFVHGDEKKK---------ARLIEILRTIGLPPPI--------I 588 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 +F K D + +Y +QQ G S V LH + +R+ L+ + G++ L+ Sbjct 589 VFVNQKKTADMVVKY-VQQAG--------MSGVTLHSGKSQEQREAALQALRDGEISVLV 639 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 TD+A RGID+ V VIN + D + YVHRIGR GRA + G+AI+ + + ++V Y + Sbjct 640 ATDLAGRGIDVPDVSLVINWQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDDDEVMYDL 699 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + E + +I +EE+ + P+ IQ ++IP+ + D++ A+TGSGKT AF IP++ Sbjct 317 WRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDY 376 Query 64 V 64 + Sbjct 377 I 377 >sp|A1D7N3|IF4A_NEOFI ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=tif1 PE=3 SV=1 Length=398 Score = 126 bits (316), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 104/367 (28%), Positives = 169/367 (46%), Gaps = 65/367 (18%) Query 281 KFLPNAP--KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K PN +ALI+ P+RELA+Q + +++ + IGG R+ + L+ Sbjct 86 KLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTNVREDMKALQE 142 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 G +VVGTPGR+ D++ L ++ +LDEAD +LS+G+++ I + +PQ T Sbjct 143 GPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQLLPQST--- 199 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 QV++ SAT+ DV +++ K M P + +K ++ + + + V Sbjct 200 ---QVVLLSATMPQ-DVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEK-------- 247 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 E W + L Y I QA+IFC T+ Sbjct 248 ------------------------EEWK--LDTLSDLYETVTIT-----QAVIFCNTRRK 276 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L F+ +HGD + +R ++ F+ G R LI TD+ ARG Sbjct 277 VDWLTDKL---------TARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARG 327 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 328 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQF 382 Query 639 YNTRLKE 645 Y+T+++E Sbjct 383 YSTQIEE 389 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + + + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQ 85 >sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea OX=3562 GN=RH7 PE=2 SV=1 Length=685 Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 102/343 (30%), Positives = 159/343 (46%), Gaps = 63/343 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+RELA Q L + F+ Y L + GG Q+S L GVDIVVGT Sbjct 186 PSVLVLLPTRELATQVLAD---FQVYGGAVGLTACSVYGGAPFHSQISSLTRGVDIVVGT 242 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL+ G L L + F VLDEAD +L G+ D + + ++ V+ ++Q ++ Sbjct 243 PGRVKDLLEKGVLKLGSLLFRVLDEADEMLKMGFVDDVELILGKVDHVS----KVQTLLF 298 Query 407 SATLHSFDVKKLSEKIMHFP-TWVDLKGEDSVPD--TVHHVVVPVNPKTDRLWERLGKSH 463 SATL S+ VK++S + + VDL + + +V H+V+P + Sbjct 299 SATLPSW-VKQISTRFLKSAKKTVDLVSDQKMKASISVRHIVIPCS-------------- 343 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + P++ + I+ ++IIF TK L Sbjct 344 --------------ASARPDLIPDIIRCYGSG-----------GRSIIFTETKESASQLA 378 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G P LHGD + +R+ L+ F+ G L+ T+VAARG+DI+ Sbjct 379 GLL--TGARP-----------LHGDIQQTQREVTLKGFRTGKFMTLVATNVAARGLDIND 425 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 V +I P + ++Y+HR GR GRA G+A+ L ++ V Sbjct 426 VQLIIQCEPPRDVEDYIHRSGRTGRAGNTGVAVMLYDPKRSSV 468 >sp|Q1DQ20|IF4A_COCIM ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis (strain RS) OX=246410 GN=TIF1 PE=3 SV=1 Length=398 Score = 126 bits (316), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 107/360 (30%), Positives = 170/360 (47%), Gaps = 63/360 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +ALI+ P+RELA+Q + ++ + IGG R+ + L +G +VVG Sbjct 93 ACQALILAPTRELAQQIQKVVVAIGDFM---SVECHACIGGTNVREDIKALNDGPQVVVG 149 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ L Q++ VLDEAD +LS+G+++ I + +PQ T QV++ Sbjct 150 TPGRVHDMIQRRVLKTDQMKMFVLDEADEMLSRGFTEQIYDIFQFLPQST------QVVL 203 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV ++ K M P + +K K + E + + +I Sbjct 204 LSATMPQ-DVLDVTTKFMRDPVRILVK------------------KAELTLEGIKQFYI- 243 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 A E W + L Y I QA+IFC T+ D L Sbjct 244 -------------AVEKEEWK--LDTLSDLYETVTIT-----QAVIFCNTRRKVDWLTDK 283 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 I F+ +HG+ + ++R ++ F+ G R LI TD+ ARGID+ V Sbjct 284 LI---------ARDFTVSAMHGEMEQNQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVS 334 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y+T+++E Sbjct 335 LVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFYSTQIEE 389 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 0/67 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + E+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLK 69 V LK Sbjct 86 KVDTNLK 92 >sp|A5DS77|DBP2_LODEL ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP2 PE=3 SV=1 Length=552 Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 101/350 (29%), Positives = 160/350 (46%), Gaps = 61/350 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q +F + ++R + GG Q+ L NGV+I + Sbjct 188 DGPIVLVLAPTRELACQIQTECSKFGA---SSRIRNTCVYGGAPKGPQIRDLANGVEICI 244 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 245 ATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 298 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V+ L+ + P V + + L SH Sbjct 299 MWSATWPK-EVQNLARDYLDNPIQVTIGSLE-----------------------LAASHT 334 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD---QAIIFCRTKIDCDN 521 T V + K + V+ ++ D + ++F TK CD Sbjct 335 ITQIVQV----------------VTEYQKRDLLVKHLESALADSNSKVLVFASTKRTCDE 378 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + Y G + + +HGD++ HER L+ F++G ++ TDVAARGID+ Sbjct 379 VTSYLRADG---------WPALAIHGDKEQHERDWVLKEFRQGSHSIMVATDVAARGIDV 429 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 G+ +V+N +P ++YVHRIGR GR G AIS ++K+ +C Sbjct 430 KGITHVVNYDMPGNIEDYVHRIGRTGRGGATGTAISFFTDNEKKLGGDLC 479 Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP- 59 + +F E G + ++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 115 ITSFDEAGFPDYVLNELKNQGFPKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 174 Query 60 VIQIVYETLKDQQEG 74 ++ I + L + +G Sbjct 175 IVHINAQPLLKRGDG 189 >sp|Q6CB69|DED1_YARLI ATP-dependent RNA helicase DED1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DED1 PE=3 SV=1 Length=618 Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 152/332 (46%), Gaps = 55/332 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q + K+F +R ++ GG +Q+ +E G D++V Sbjct 245 PTALVLAPTRELVSQIYDEAKKFAY---RSWVRPCVVYGGADIGEQMRNIERGCDLLVAA 301 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ GK++L +++LVLDEAD +L G+ PQ+ + IV Sbjct 302 PGRLVDLIDRGKVSLENIKYLVLDEADRMLDMGFE----------PQI-------RAIVQ 344 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 + + + ++ FP + + D + D + V V ++ + +++ Sbjct 345 GSGMPDVNERQTLMFSATFPRNIQMLARDFLKDYIFLSVGRVGSTSENITQKV------- 397 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + +D + A ++ S A K L ++F TK D L Sbjct 398 --EYVEDGDKISA-LLDILSAAGKGL----------------TLVFVETKRGADYLCDVL 438 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + F +HGDR +R++ LE F+ G L+ T VAARG+DI V + Sbjct 439 ---------QSEDFPATSIHGDRSQRDRERALEMFRDGTTPILVATAVAARGLDIPNVTH 489 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V+N LP + +YVHRIGR GRA G+A + Sbjct 490 VVNYDLPTDIDDYVHRIGRTGRAGNTGIATAF 521 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 18/37 (49%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT +Q S+P++ G D++ A+TGSGKTG F PV+ Sbjct 183 PTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVL 219 >sp|Q4WX43|IF4A_ASPFU ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=tif1 PE=3 SV=1 Length=406 Score = 126 bits (316), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 104/367 (28%), Positives = 169/367 (46%), Gaps = 65/367 (18%) Query 281 KFLPNAP--KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K PN +ALI+ P+RELA+Q + +++ + IGG R+ + L+ Sbjct 86 KLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTNVREDMKALQE 142 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 G +VVGTPGR+ D++ L ++ +LDEAD +LS+G+++ I + +PQ T Sbjct 143 GPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQLLPQST--- 199 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 QV++ SAT+ DV +++ K M P + +K ++ + + + V Sbjct 200 ---QVVLLSATMPQ-DVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAV---------- 245 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 E W + L Y I QA+IFC T+ Sbjct 246 ----------------------EKEEWK--LDTLSDLYETVTIT-----QAVIFCNTRRK 276 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L F+ +HGD + +R ++ F+ G R LI TD+ ARG Sbjct 277 VDWLTDKL---------TARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARG 327 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 328 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQF 382 Query 639 YNTRLKE 645 Y+T+++E Sbjct 383 YSTQIEE 389 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDAMDLKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQ 85 >sp|Q6CT85|RRP3_KLULA ATP-dependent rRNA helicase RRP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=RRP3 PE=3 SV=1 Length=487 Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 150/333 (45%), Gaps = 59/333 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A I+ P+RELA+Q + +R I+GG++ DQ L I++ TPG Sbjct 138 ACILAPTRELAQQIKETFDSLGSLMG---VRSTCIVGGMSMMDQARDLMRKPHIIIATPG 194 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T NL ++++LV+DEAD LL + ++R+ N IP + G+ + S Sbjct 195 RLMDHLENTKGFNLRKLKYLVMDEADRLLDMEFGPVLDRILNIIP---TQGR--TTYLFS 249 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ S + KL + P + + DT+ ++ V Sbjct 250 ATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVV------------------- 289 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 PG LK + + + E I+F RTK + + + Sbjct 290 ---------PGG------------LKNTFLIYLLNEFIGKSTIVFTRTKANAERISNLC- 327 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +FS LHGD ++R L+ FK G L+ TDVAARG+DI V V Sbjct 328 --------NLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIV 379 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN +P + ++Y+HR+GR RA R G +ISLV+ Sbjct 380 INYDIPVDSKSYIHRVGRTARAGRSGKSISLVS 412 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/68 (40%), Positives = 48/68 (71%), Gaps = 3/68 (4%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 +E+ ++PE+ +A + +++ PT IQ+++IP L G D++ A+TGSGKT AF+IP++ + Sbjct 70 TELDLVPELIEACKNLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQL 129 Query 65 YETLKDQQ 72 + DQQ Sbjct 130 WH---DQQ 134 >sp|Q7ZVA6|IF4A3_DANRE Eukaryotic initiation factor 4A-III OS=Danio rerio OX=7955 GN=eif4a3 PE=2 SV=1 Length=406 Score = 126 bits (316), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 165/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 103 QALILAPTRELAGQIQKVLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 159 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV + S Sbjct 160 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVCLIS 213 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 214 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 255 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 256 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 292 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 293 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQVSLI 344 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 345 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 397 Score = 40.8 bits (94), Expect = 0.043, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT F + V+Q Sbjct 34 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 93 Query 63 IVYETLKDQQ 72 + +++ Q Sbjct 94 CLDIQVRETQ 103 >sp|Q9VHS8|IF4A3_DROME Eukaryotic initiation factor 4A-III OS=Drosophila melanogaster OX=7227 GN=CG7483 PE=1 SV=1 Length=399 Score = 125 bits (315), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 104/358 (29%), Positives = 164/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L + P+RELA Q I D ++ + IGG + + L+ G IV GTP Sbjct 96 QVLCLSPTRELAVQIQKVILALG---DMMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTP 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV++ S Sbjct 153 GRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVVLIS 206 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 207 ATL-PHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 248 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 249 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 285 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER + ++ F+ G R LI TDV ARGID+ V V Sbjct 286 --------REANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLV 337 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V ++ ++ + + Y+T++ E Sbjct 338 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDI-----EQYYSTQIDE 390 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 0/72 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ M + E+ + + + P+ IQ SI I+ G DV+ A++G+GKT FSI + Sbjct 25 IPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISI 84 Query 61 IQIVYETLKDQQ 72 +Q + TL++ Q Sbjct 85 LQSLDTTLRETQ 96 >sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0520700 PE=2 SV=1 Length=696 Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 105/356 (29%), Positives = 162/356 (46%), Gaps = 63/356 (18%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 I++S +G + ++ P L++ P+RELA+Q + F Y L + G Sbjct 173 ILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTD---FAFYGATFGLSACCVYG 229 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G R Q + GVDIVVGTPGR+ D V G LN ++F VLDEAD +L+ G+ D + Sbjct 230 GSDYRSQEMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVE 289 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVDLKGEDSV--PDTVH 442 + ++ VT ++Q ++ SAT+ + VKKLS + + VDL G++ + +V Sbjct 290 LILGKVEDVT----KVQTLLFSATIPEW-VKKLSLRFLKSGKKTVDLVGDEKLKASASVR 344 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 H+ +P N R ++ + D + +R G Sbjct 345 HLALPCN--------RAARAQVIPDIIRC--YSRGG------------------------ 370 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + IIF TK +L G LHGD +R+ L F+ Sbjct 371 -----RTIIFTETKESASDL-------------SGLIAGSRALHGDVAQAQREVILAGFR 412 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 G L+ T+VAARG+DI+ V +I P + + Y+HR GR GRA G+A+ L Sbjct 413 SGKFLVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVML 468 Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust. Identities = 16/35 (46%), Positives = 24/35 (69%), Gaps = 0/35 (0%) Query 28 IQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 IQA + L+L G D++ A TG GKT AF +P+++ Sbjct 141 IQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILE 175 >sp|Q75BS4|DHH1_EREGS ATP-dependent RNA helicase DHH1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DHH1 PE=3 SV=1 Length=484 Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 98/335 (29%), Positives = 153/335 (46%), Gaps = 60/335 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT ++ K+ + ++ GG RD + L V ++V Sbjct 96 NKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTNLRDDIMRLNEPVHVLV 152 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL S +LS+ V+DEAD +LS+ + + ++ + +PQ Q + Sbjct 153 GTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKSLVEQILSFLPQ------NHQSL 206 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK+ K ++ P ++L E ++ + E K H Sbjct 207 LFSATF-PLTVKEFMVKHLNKPYEINLMDELTLKGITQYYA---------FVEERQKLHC 256 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 NT ++S+ +++QAIIFC + + L + Sbjct 257 L--------NT--------LFSKL----------------QINQAIIFCNSTNRVELLAK 284 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G +SC H K ER + F++G VR L+C+D+ RGIDI V Sbjct 285 KITDLG---------YSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAV 335 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN P + Y+HRIGR GR +GLAI+L+ Sbjct 336 NVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI 370 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ L D+L A+ G+GKT AF IP ++ Sbjct 30 TFEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLE 89 Query 63 IV 64 IV Sbjct 90 IV 91 >sp|C4LB49|RHLB_TOLAT ATP-dependent RNA helicase RhlB OS=Tolumonas auensis (strain DSM 9187 / TA4) OX=595494 GN=rhlB PE=3 SV=1 Length=425 Score = 126 bits (316), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 107/349 (31%), Positives = 163/349 (47%), Gaps = 64/349 (18%) Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 HS +A+ Q N P+ LI+ P+RELA Q N+ ++ + L GG Sbjct 74 HSASAERRQ-----NQPRVLIMAPTRELAVQIYNDAVPMS---ESCGFKMGLAYGGDGYD 125 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 QL+VL+ GVD+++GT GR+ D + G ++L ++ +VLDEAD + G+ I + + Sbjct 126 KQLAVLQEGVDLLIGTTGRIIDYLKQGIIDLGAIQVVVLDEADRMFDLGFIKDIRFLFRR 185 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVVVPVN 449 +P +RL ++ SATL S V++L+ + M+ P + ++ E + + P N Sbjct 186 MP---PPAQRLNMLF-SATL-SLRVQELAYEHMNEPQHIQIEPEQMTGQRIKEELFYPSN 240 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 D++ L E W E +A Sbjct 241 --EDKMLLLLTLME-------------------EDWPE--------------------KA 259 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIF TK C+++ + GH+ L GD +R + LE F G + L Sbjct 260 IIFANTKHGCEDVHAWL-------QADGHRVGL--LTGDVPQKKRLKILEDFTAGLLDVL 310 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA R G AIS Sbjct 311 VATDVAARGLHIPDVSHVFNYDLPDDAEDYVHRIGRTGRAGRSGHAISF 359 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+E+G+ P++ VE + T IQAE+IPL+L G ++ A+TG+GKT AF Sbjct 11 FAELGLEPQVLAGVEAKGFHNCTPIQAETIPLLLTGKNIAGQAQTGTGKTIAF 63 >sp|B7ZTW1|IF4A3_XENTR Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis OX=8364 GN=eif4a3 PE=2 SV=1 Length=415 Score = 125 bits (315), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 165/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 112 QALILAPTRELAGQIQKVLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 168 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV + S Sbjct 169 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVCLIS 222 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 223 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 264 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 265 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 301 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 302 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 353 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 354 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 406 Score = 40.8 bits (94), Expect = 0.037, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT F + V+Q Sbjct 43 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 102 Query 63 IVYETLKDQQ 72 + +++ Q Sbjct 103 CLDIQVRETQ 112 >sp|Q54Y81|DDX23_DICDI ATP-dependent RNA helicase ddx23 OS=Dictyostelium discoideum OX=44689 GN=helB2 PE=2 SV=1 Length=834 Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/361 (27%), Positives = 158/361 (44%), Gaps = 67/361 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P AL++ P+REL +Q + F ++ R + ++GG + DQ + G +I++ Sbjct 488 DGPYALVMAPTRELVQQIEKETRNFAQHFG---FRVVSLVGGQSIEDQAYQVSKGCEIII 544 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP------------ 392 TPGRL+D + L L+Q ++VLDEAD ++ G+ + + + +P Sbjct 545 ATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVTSVLDAMPSSFLKSEDDEMA 604 Query 393 -QVTSDGKRL--QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + SD + I+ SAT+ V+KLS+K + P + + V D + V+ V Sbjct 605 EKQESDRSHIYRTTILFSATMPPL-VEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVK 663 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + D K E+ + IK+ Sbjct 664 SEND---------------------------------------KKEHLTQLIKDGPPPPI 684 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIF K CD + P + + S LH R +R+ LE FKK L Sbjct 685 IIFVNKKKHCDII---------APVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEVL 735 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 I T VA+RGI + GV +VIN +P ++Y HRIGR GRA GLA S + + ++ Y Sbjct 736 IATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFITDKDVEIMYD 795 Query 630 V 630 + Sbjct 796 L 796 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 40/61 (66%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + E + EI +A+ ++ + P+ IQ +SIP+ L G D+L AETGSGKT AF IP+ Sbjct 412 IRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPM 471 Query 61 I 61 + Sbjct 472 L 472 >sp|P39517|DHH1_YEAST ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DHH1 PE=1 SV=1 Length=506 Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/335 (30%), Positives = 151/335 (45%), Gaps = 60/335 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT ++ K+ + ++ GG RD + L V I+V Sbjct 113 NKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTNLRDDILRLNETVHILV 169 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL S +LS ++DEAD +LS+ + I ++ + +P Q + Sbjct 170 GTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTH------QSL 223 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK+ K +H P ++L E ++ + E K H Sbjct 224 LFSATF-PLTVKEFMVKHLHKPYEINLMEELTLKGITQYYA---------FVEERQKLHC 273 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 NT ++S+ +++QAIIFC + + L + Sbjct 274 L--------NT--------LFSKL----------------QINQAIIFCNSTNRVELLAK 301 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G +SC H K ER + F++G VR L+C+D+ RGIDI V Sbjct 302 KITDLG---------YSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAV 352 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN P + Y+HRIGR GR +GLAI+L+ Sbjct 353 NVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI 387 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ + G D+L A+ G+GKT AF IP ++ Sbjct 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106 Query 63 IVYETLKDQQ 72 V L Q Sbjct 107 KVKPKLNKIQ 116 >sp|A6ZXG9|DHH1_YEAS7 ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DHH1 PE=3 SV=1 Length=506 Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/335 (30%), Positives = 151/335 (45%), Gaps = 60/335 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT ++ K+ + ++ GG RD + L V I+V Sbjct 113 NKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTNLRDDILRLNETVHILV 169 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL S +LS ++DEAD +LS+ + I ++ + +P Q + Sbjct 170 GTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTH------QSL 223 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK+ K +H P ++L E ++ + E K H Sbjct 224 LFSATF-PLTVKEFMVKHLHKPYEINLMEELTLKGITQYYA---------FVEERQKLHC 273 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 NT ++S+ +++QAIIFC + + L + Sbjct 274 L--------NT--------LFSKL----------------QINQAIIFCNSTNRVELLAK 301 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G +SC H K ER + F++G VR L+C+D+ RGIDI V Sbjct 302 KITDLG---------YSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAV 352 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN P + Y+HRIGR GR +GLAI+L+ Sbjct 353 NVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI 387 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ + G D+L A+ G+GKT AF IP ++ Sbjct 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106 Query 63 IVYETLKDQQ 72 V L Q Sbjct 107 KVKPKLNKIQ 116 >sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2 Length=591 Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/348 (28%), Positives = 153/348 (44%), Gaps = 71/348 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q ++F +R I GG Q+ L GV+IV+ Sbjct 237 DGPIVLILAPTRELAVQIQEESRKFGL---RSGVRSTCIYGGAPKGPQIRDLRRGVEIVI 293 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 294 ATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQI------RPDRQTL 347 Query 405 VCSATLHSFDVKKLSEKIMHFPT-----WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 + SAT +V+ L+ + + P DLK S+ + +VP Sbjct 348 LWSATWPR-EVETLARQFLRDPYKAIIGSTDLKANQSINQVIE--IVP------------ 392 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD--QAIIFCRTKI 517 +PE ++ + +LK MD + +IF TK Sbjct 393 ---------------------TPEKYNRLLTLLK----------QLMDGSKILIFVETKR 421 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 CD + + G + + +HGD+ ER + L FK G + TDVAAR Sbjct 422 GCDQVTRQLRMDG---------WPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAAR 472 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 G+D+ + V+N P+ ++Y+HRIGR GRA G+A + + K Sbjct 473 GLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAK 520 Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F + I +A+ ++ + PT IQA+ P+ L G D++ AETGSGKT A+ +P Sbjct 164 MKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 223 Query 61 I 61 + Sbjct 224 L 224 >sp|Q2UPY3|IF4A_ASPOR ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=tif1 PE=3 SV=1 Length=421 Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 105/367 (29%), Positives = 170/367 (46%), Gaps = 65/367 (18%) Query 281 KFLPNAP--KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K PN +ALI+ P+RELA+Q + +++ + IGG A R+ + L Sbjct 109 KLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMN---ITCHACIGGTAVREDMKALGE 165 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 G ++VVGTPGR+ D++ L ++ +LDEAD +LS+G+++ I + +PQ T Sbjct 166 GPEVVVGTPGRVHDMIQRRVLKTDHLKQFILDEADEMLSRGFTEQIYDIFQLLPQST--- 222 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 QV++ SAT+ DV +++ K M P + +K ++ + + + V Sbjct 223 ---QVVLLSATMPQ-DVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEK-------- 270 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 E W + L Y I QA+IFC T+ Sbjct 271 ------------------------EEWK--LDTLSDLYETVTIT-----QAVIFCNTRRK 299 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L F+ +HGD + +R ++ F+ G R LI TD+ ARG Sbjct 300 VDWLTDKL---------TARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARG 350 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 351 IDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQF 405 Query 639 YNTRLKE 645 Y+T+++E Sbjct 406 YSTQIEE 412 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 49 SFDAMELKPELLRGVYAYGFERPSAIQQRAIKPIIKGSDVIAQAQSGTGKTATFSISALQ 108 >sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0911100 PE=2 SV=2 Length=666 Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/346 (29%), Positives = 150/346 (43%), Gaps = 67/346 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q +F Y + R I GG Q+ L GV+IV+ Sbjct 323 DGPIVLILAPTRELAVQIQQESGKFGSYS---RTRSTCIYGGAPKGPQIRDLRRGVEIVI 379 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ G NL +V +LVLDEAD +L G+ I ++ + Q+ D Q + Sbjct 380 ATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKI---VAQIRPD---RQTL 433 Query 405 VCSATLHSFDVKKLSEKIMHFPTWV-----DLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 SAT +V+ L+ + + P V DLK S+ + V+ + K RL + L Sbjct 434 YWSATWPR-EVESLARQFLQNPYKVIIGSPDLKANHSIQQIIE--VISEHEKYPRLSKLL 490 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 ++ G + +IF +TK DC Sbjct 491 S-----------------------------DLMDGS------------RILIFFQTKKDC 509 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D + + G + + +HGD+ ER L FK G + TDVAARG+ Sbjct 510 DKVTRQLRMDG---------WPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGL 560 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 D+ + VIN P ++Y+HRIGR GRA G A + K Sbjct 561 DVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAK 606 Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/56 (36%), Positives = 33/56 (59%), Gaps = 0/56 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 F E QA+ + ++ PT IQ++ P+ L G D++ A+TGSGKT ++ +P Sbjct 253 FQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLP 308 >sp|Q7SEL0|PRP28_NEUCR Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=prp-28 PE=3 SV=1 Length=728 Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/352 (27%), Positives = 165/352 (47%), Gaps = 44/352 (13%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P ALI+ P+REL +Q + K+F + + I+GG + +Q L NG +I+V Sbjct 368 DGPYALILAPTRELVQQIESEAKKFATPLG---FTVVSIVGGHSLEEQAFALRNGAEIIV 424 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + L SQ + ++DEAD ++ QG+ + + ++ + +P Sbjct 425 ATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILDAMP------------ 472 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 V + + D +E +VD G+D T+ + + P + ER+ K ++ Sbjct 473 VTNEKPDTDD----AENPQLMSRYVD--GKDRYRQTMMYTAT-MPP----IVERIAKKYL 521 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA------IIFCRTKID 518 R + N ++ E + ++ + GE + + ++ I+F K + Sbjct 522 RRPAIVTIGNAGEAVDTVE---QRVEFVSGEDKRKKRLQEILNSGQFKPPIIVFVNIKRN 578 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 CD + + D KG +S V LHG + +R+ L + G L+ TD+A RG Sbjct 579 CDMVAR---------DIKGMGYSAVTLHGSKTQEQREAALASLRNGQTDILVATDLAGRG 629 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 ID+ V V+N + ++Y HRIGR GRA + G+AI+ + E V Y + Sbjct 630 IDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGPEDNDVLYDL 681 Score = 42.4 bits (98), Expect = 0.018, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E + + V+ + + PT IQ +IP+ L D++ A TGSGKT AF +P+ Sbjct 292 MRSWEESTLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPL 351 Query 61 IQIVYE 66 + + E Sbjct 352 LVYISE 357 >sp|Q54IV3|DDX42_DICDI Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium discoideum OX=44689 GN=ddx42 PE=3 SV=1 Length=986 Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/340 (28%), Positives = 155/340 (46%), Gaps = 65/340 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P AL + P+RELA Q ++ KY KL+ ++ GGV+ + Q L+ G +I+V Sbjct 377 DGPIALFLAPTRELAHQIYLETLKYSKYF---KLKTTVLYGGVSKQQQCKELKAGCEIIV 433 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL--- 401 TPGRL D++ L++V +LVLDEAD + G+ PQV S + Sbjct 434 ATPGRLIDMIKLKATKLNRVSYLVLDEADKMFDFGFG----------PQVLSIVNHVRPD 483 Query 402 -QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 Q ++ SAT +V++ + I+ P + + S + +V + +D+ W L Sbjct 484 RQTLLFSATFKP-NVEEFARTILSDPIKISIGMIGSANSDITQIVQVLKSDSDK-WNWL- 540 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + + +L + +V +IF TK+ + Sbjct 541 -------------------------TNQLALLLSQGSV-----------LIFVSTKVAVE 564 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + G F LHGD+ ER Q ++ FK+G + LI TDVAARG+D Sbjct 565 QLSSNLTKFG---------FQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGLD 615 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 I + V+N + +++ HRIGR GRA G+A +L+ Sbjct 616 IPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLIT 655 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F G + QA+ + PT IQ ++IP+ L G D++ A+TGSGKT F P Sbjct 304 VTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPS 363 Query 61 I 61 I Sbjct 364 I 364 >sp|A7ENE0|PRP5_SCLS1 Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=prp5 PE=3 SV=1 Length=1114 Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/354 (27%), Positives = 164/354 (46%), Gaps = 62/354 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q K F K + LR + GG +DQ++ L+ G +I+V Sbjct 555 DGPIGLIMTPTRELATQIHKECKPFLKAMG---LRAVCAYGGAIIKDQIADLKRGAEIIV 611 Query 345 GTPGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 TPGR+ +L++ +G++ NL +V ++VLDEAD + G+ + ++ N I Sbjct 612 CTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNI------RPNR 665 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD--RLWERL 459 Q I+ SAT+ + L++K + P + + G V + +V K RL E L Sbjct 666 QTILFSATMPRI-MDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREEKEKFHRLLELL 724 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 G+ + +D + +IF + Sbjct 725 GELYNADEDA--------------------------------------RTLIFVDRQEKA 746 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D+L + +++G + C+ +HG + +R ++ FK G V +I T VAARG+ Sbjct 747 DDLLKDLMRKG---------YPCMSIHGGKDQVDRDSTIDDFKAGVVPIMIATSVAARGL 797 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 D+ + V+N P+ ++YVHR GR GRA G A++ + E+E+ + + Sbjct 798 DVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQYSVGIAKA 851 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 38/56 (68%), Gaps = 4/56 (7%) Query 17 VEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 ++++ + PT IQ ++IP I+ G DV+ A+TGSGKT AF +P ++ ++DQ+ Sbjct 498 IKKLGYDKPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLP----MFRHIRDQR 549 >sp|Q6BRN4|IF4A_DEBHA ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=TIF1 PE=3 SV=1 Length=397 Score = 125 bits (313), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/360 (29%), Positives = 169/360 (47%), Gaps = 63/360 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + +ALI+ P+RELA Q N I Y++ IGG + +D + ++GV IVVG Sbjct 91 STQALILAPTRELALQIQNVITHIGLYLNVTVHAS---IGGTSMKDDIEAFKSGVQIVVG 147 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ +V+ +LDEAD +LS G+ + I + +P+ T QV++ Sbjct 148 TPGRVFDMIERRFFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETT------QVVL 201 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M+ P + +K ++ + + + V + D ++ L + Sbjct 202 LSATMPQ-DVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVE-QEDYKFDCLCDLY-- 257 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 ++I + QA+IFC T+ + L Sbjct 258 ---------------------DSISV---------------TQAVIFCNTRSKVEFLTTK 281 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 KG F+ +H D +R + F+ G R LI TD+ ARGID+ V Sbjct 282 L---------KGENFTVSAIHADLPQADRDTIMNEFRSGSSRILISTDLLARGIDVQQVS 332 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP K+NY+HRIGR GR R G+AI+ V + + + + Y+T+++E Sbjct 333 LVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDQDVGMMREI-----EKFYSTQIEE 387 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 23/70 (33%), Positives = 37/70 (53%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 24 TFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQ 83 Query 63 IVYETLKDQQ 72 + E K Q Sbjct 84 RIDENEKSTQ 93 >sp|B5DG42|IF4A3_SALSA Eukaryotic initiation factor 4A-III OS=Salmo salar OX=8030 GN=eif4a3 PE=2 SV=1 Length=406 Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/358 (28%), Positives = 165/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 103 QALILAPTRELAGQIQKVLLALGDYMN---VQCHSCIGGTNVGEDIRKLDYGQHVVAGTP 159 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV + S Sbjct 160 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVCLIS 213 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 214 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 255 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 256 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 292 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 293 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 344 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 345 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 397 Score = 40.8 bits (94), Expect = 0.043, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT F + V+Q Sbjct 34 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 93 Query 63 IVYETLKDQQ 72 + +++ Q Sbjct 94 CLDIQVRETQ 103 >sp|O42226|I4A3B_XENLA Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis OX=8355 GN=eif4a3-b PE=2 SV=1 Length=414 Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 101/358 (28%), Positives = 165/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P++ELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 111 QALILAPTKELARQIQKVLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 167 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV + S Sbjct 168 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVCLIS 221 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 222 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 263 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 264 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 300 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 301 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 352 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR R G+AI+ V + ++ + + Y+T++ E Sbjct 353 INYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 405 Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ ++I I+ G DV+ +++G+GKT F + V+Q Sbjct 42 TFDTMGLREDLLRGIYAYGFEKPSAIQQKAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 101 Query 63 IVYETLKDQQ 72 + +++ Q Sbjct 102 CLDIQIRETQ 111 >sp|A6RW79|PRP5_BOTFB Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=prp5 PE=3 SV=1 Length=1151 Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/354 (27%), Positives = 164/354 (46%), Gaps = 62/354 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q K F K + LR + GG +DQ++ L+ G +I+V Sbjct 626 DGPIGLIMTPTRELATQIHKECKPFLKAMG---LRAVCAYGGAIIKDQIADLKRGAEIIV 682 Query 345 GTPGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 TPGR+ +L++ +G++ NL +V ++VLDEAD + G+ + ++ N I Sbjct 683 CTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNNI------RPNR 736 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD--RLWERL 459 Q I+ SAT+ + L++K + P + + G V + +V K RL E L Sbjct 737 QTILFSATMPRI-MDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREEKEKFHRLLELL 795 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 G+ + +D + +IF + Sbjct 796 GELYNTDEDA--------------------------------------RTLIFVDRQEKA 817 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D+L + +++G + C+ +HG + +R ++ FK G V +I T VAARG+ Sbjct 818 DDLLKDLMRKG---------YPCMSIHGGKDQVDRDSTIDDFKAGVVPIMIATSVAARGL 868 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 D+ + V+N P+ ++YVHR GR GRA G A++ + E+E+ + + Sbjct 869 DVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQYSVGIAKA 922 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 4/56 (7%) Query 17 VEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 + ++ + PT IQ ++IP I+ G DV+ A+TGSGKT AF +P ++ ++DQ+ Sbjct 569 ITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLP----MFRHIRDQR 620 >sp|A5DB98|IF4A_PICGU ATP-dependent RNA helicase eIF4A OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=TIF1 PE=3 SV=1 Length=396 Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 105/360 (29%), Positives = 166/360 (46%), Gaps = 63/360 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +ALI+ P+RELA Q N I Y++ IGG + +D + ++GV IVVG Sbjct 90 ATQALILAPTRELALQIQNVITHIGLYLNVTVHAS---IGGTSMKDDIEAFKSGVQIVVG 146 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ +V+ ++DEAD +LS G+ + I + +P+ T QV++ Sbjct 147 TPGRVFDMIERRFFRTDKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETT------QVVL 200 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M+ P + +K K + E + + +I Sbjct 201 LSATMPQ-DVLEVTTKFMNNPVRILVK------------------KDELTLEGIKQFYI- 240 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 +V +D K + + QA+IFC T+ + L Sbjct 241 --NVEQED------------------FKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTK 280 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 K F+ +H D +R + F+ G R LI TD+ ARGID+ V Sbjct 281 L---------KAENFTVSAIHADLPQSDRDTIMNEFRSGSSRILIATDLLARGIDVQQVS 331 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP K+NY+HRIGR GR R G+AI+ V E + + + Y+T+++E Sbjct 332 LVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDEDVGMMREI-----EKFYSTQIEE 386 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 23 SFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQ 82 Query 63 IVYETLKDQQ 72 + E LK Q Sbjct 83 RIDENLKATQ 92 >sp|Q8SRB2|DBP2_ENCCU ATP-dependent RNA helicase DBP2 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=DBP2 PE=3 SV=1 Length=495 Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/325 (29%), Positives = 148/325 (46%), Gaps = 58/325 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+REL Q + +F + LR + GG +++ Q+ L G ++V+ Sbjct 159 DGPIVLVLAPTRELVMQIKKVVDEFCGMFN---LRSTAVYGGASSQPQIRALHEGAEVVI 215 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL DL G LS+V FLVLDEAD +L G+ + ++ IP+ ++ Q + Sbjct 216 ATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRKI---IPKTNAN---RQTL 269 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +V+ L+E M+ V + E+ + N K ++ E Sbjct 270 MWSATWPR-EVRGLAESYMNEYIQVVVGNEE----------LKTNSKIKQIVEVCSGREK 318 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + DN K D+ I+FC K CD+LE Sbjct 319 EDKLIGVLDN-----------------------------FKGDKVIVFCNMKRTCDDLE- 348 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Y + + G + LHGD+ + R + L+ F+ G LI T+VA RG+D++ V Sbjct 349 YVLNRSG--------YGAAALHGDKSQNIRDKVLDDFRSGRRPILIATEVAGRGLDVNDV 400 Query 585 PYVINVTLPDEKQNYVHRIGRVGRA 609 VIN P ++YVHRIGR R Sbjct 401 KLVINFDFPGSCEDYVHRIGRTARG 425 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/78 (36%), Positives = 42/78 (54%), Gaps = 4/78 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E G E+ ++ E + PT IQ + P+ L G D++ A+TGSGKT +F +P + Sbjct 89 FEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALV- 147 Query 64 VYETLKDQQEGKKGKTTI 81 KDQQ ++G I Sbjct 148 ---HAKDQQPLRRGDGPI 162 >sp|Q26696|DDX17_TRYBB Putative DEAD-box RNA helicase HEL64 OS=Trypanosoma brucei brucei OX=5702 GN=HEL64 PE=3 SV=1 Length=568 Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 163/342 (48%), Gaps = 59/342 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P +++ P+RELA+Q I++ K + + + GG QL +L GV I+V Sbjct 174 DGPMVVVLAPTRELAQQ----IEEETKKVIPGDVYCGCVYGGAPKGPQLGLLRRGVHILV 229 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + ++NL +V +LVLDEAD +L G+ + ++ QI Q + Sbjct 230 ATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQI------RPDRQTV 283 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT ++++L+ + W+ + +V + N + + + I Sbjct 284 MFSATWPR-EIQRLAAEFQK--QWIRI--------SVGSTELQAN-------KDVTQRFI 325 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T + +D R + ++EH+ ++ ++FC+ K D LE+ Sbjct 326 LTQEFAKQDELR----------------------KLMQEHREERVLVFCKMKRTADELER 363 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G + + +HGD++ +R+ L RF+K L+ TDVAARG+DI + Sbjct 364 QLRRWG---------YDAMAIHGDKEQRQREFILARFRKDPRLCLVATDVAARGLDIKQL 414 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN P + +YVHRIGR GRA G + L+ ++ ++ Sbjct 415 ETVINYDFPMQIDDYVHRIGRTGRAGGEGRCVYLITKKEAQI 456 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/63 (35%), Positives = 41/63 (65%), Gaps = 2/63 (3%) Query 1 MAAFSEM-GVMPE-IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 M++F + G++P + + + ++ PT +QA+S P++L G D++ A+TGSGKT F + Sbjct 99 MSSFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMV 158 Query 59 PVI 61 P + Sbjct 159 PAL 161 >sp|Q2HEB0|PRP28_CHAGB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=PRP28 PE=3 SV=1 Length=705 Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/374 (26%), Positives = 162/374 (43%), Gaps = 77/374 (21%) Query 280 TKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 T+F N P ALI+ P+REL +Q ++F + + I+GG + +Q L N Sbjct 338 TEFNKNDGPYALILAPTRELVQQIETEARKFAGPLG---FTVVSIVGGHSLEEQAFALRN 394 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV---- 394 G +I+V TPGRL D + L SQ ++++DEAD ++ QG+ + + ++ + +P Sbjct 395 GAEIIVATPGRLVDCLERRLLVFSQCCYIIMDEADRMIDQGFEEPLTKILDALPVANEKP 454 Query 395 -TSDGKRLQVI--------------VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 T D + Q++ + +AT+ V+K+++K + P V + D Sbjct 455 DTEDAENSQLMSRYLGGKDRYRQTMMYTATMPPL-VEKIAKKYLRRPAIVTIGNAGEAVD 513 Query 440 TVHHVVVPV---NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 TV V V + + RL E L + Sbjct 514 TVEQRVEFVSGEDKRKRRLQEILNSGQFKP------------------------------ 543 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 I+F K +C+ + + D K +S V LHG + +R+ Sbjct 544 -----------PVIVFVNIKRNCEMVAK---------DIKSWGYSTVTLHGSKTQEQREA 583 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 +L + G L+ TD+A RGID+ V V+N +P + Y HRIGR GRA + G+AI Sbjct 584 SLASVRNGQANILVATDLAGRGIDVADVSLVVNFNMPSSIEAYTHRIGRTGRAGKSGVAI 643 Query 617 SLVATEKEKVWYHV 630 + + E V Y + Sbjct 644 TFLGNEDSDVMYDL 657 Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 38/66 (58%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M +++E + + + VE + + PT IQ +IP+ D++ A TGSGKT AF +P+ Sbjct 268 MRSWAESNLPRRLLEIVENVGYDEPTPIQRAAIPIAQQARDLIGVAVTGSGKTAAFLLPL 327 Query 61 IQIVYE 66 + + E Sbjct 328 LVYISE 333 >sp|Q9WTM2|DDX6_CAVPO Probable ATP-dependent RNA helicase DDX6 (Fragment) OS=Cavia porcellus OX=10141 GN=DDX6 PE=2 SV=1 Length=472 Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 148/333 (44%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+++ P+RELA Q Q K++ K+ + GG RD + L++ V +V+ TP Sbjct 155 QAMVIVPTRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATP 212 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ G + V+ +VLDEAD LLSQ DF+ M + I + K Q+++ S Sbjct 213 GRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTLP---KNRQILLYS 266 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+K + P ++L E ++ + + ER Sbjct 267 ATF-PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAY--------VTER--------Q 309 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 VH + P + +Q+IIFC + + L + Sbjct 310 KVHCLNTLFPRLQT-------------------------NQSIIFCNSSQRVELLAKKIS 344 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q G +SC +H + R + F+ G R L+CTD+ RGIDI V V Sbjct 345 QLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVV 395 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN P + Y+HRIGR GR +GLAI+L+ Sbjct 396 INFDFPKLAETYLHRIGRSGRFGHLGLAINLIT 428 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 87 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALTGRDILARAKNGTGKSGAYLIPLLE 145 >sp|A5DVM3|IF4A_LODEL ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=TIF1 PE=3 SV=1 Length=397 Score = 124 bits (312), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/335 (30%), Positives = 156/335 (47%), Gaps = 58/335 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + +ALI+ P+RELA Q N I Y++ IGG + D + ++GV IVVG Sbjct 91 STQALILAPTRELALQIKNVITSIGLYLNVTVHAS---IGGTSMSDDIEAFKSGVQIVVG 147 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ +V+ +LDEAD +LS G+ + I + +P+ T QV++ Sbjct 148 TPGRVFDMIERRYFRTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETT------QVVL 201 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M+ P + +K ++ + + + Sbjct 202 LSATMPQ-DVLEVTTKFMNNPVRILVKKDELTLEGIKQYFI------------------- 241 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 +V +D K + V + QA+IFC T+ + L Sbjct 242 --NVEVED------------------YKFDCLVDLYDSISVTQAVIFCNTRSKVEFLTNK 281 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +Q +F+ +H D ER ++ F+ G R LI TD+ ARGID+ V Sbjct 282 LREQ---------KFTVSAIHADLPQGERDTIMKEFRSGSSRILISTDLLARGIDVQQVS 332 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 VIN LP K+NY+HRIGR GR R G+AI+ V Sbjct 333 LVINYDLPANKENYIHRIGRGGRFGRKGVAINFVT 367 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (54%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query 64 VYETLKDQQ 72 + E K Q Sbjct 85 IDENEKSTQ 93 >sp|O49289|RH29_ARATH Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana OX=3702 GN=RH29 PE=3 SV=1 Length=845 Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/339 (30%), Positives = 156/339 (46%), Gaps = 64/339 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+R+LAEQTL K+ K+ D LR L++GG + DQ L G D+++ TP Sbjct 100 RALILSPTRDLAEQTLKFTKELGKFTD---LRVSLLVGGDSMEDQFEELTKGPDVIIATP 156 Query 348 GRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GRL L+S + L V ++V DEAD L G+++ ++H + Q++ + Q ++ Sbjct 157 GRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAE---QLHQILTQLSENR---QTLLF 210 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK---TDRLWERLGKSH 463 SATL S + + ++ + P V L E+ + + + V P+ + L+ L + H Sbjct 211 SATLPS-ALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLY--LVREH 267 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I +D Q +IF TK + + Sbjct 268 ISSD---------------------------------------QQTLIFVSTKHHVEFVN 288 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 F + P VC +GD RK ++ RF+ LI TD+AARGIDI Sbjct 289 SLFKLENIEP--------SVC-YGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPL 339 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + VIN P + +VHR+GR RA R G A S V E Sbjct 340 LDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPE 378 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 40/59 (68%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + P + A+++ + +PT IQ +++PLIL G DV+ A TGSGKT AF IP+++ Sbjct 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLE 88 >sp|A4R5B8|DBP10_PYRO7 ATP-dependent RNA helicase DBP10 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP10 PE=3 SV=1 Length=914 Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 103/339 (30%), Positives = 159/339 (47%), Gaps = 36/339 (11%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ PSRELA QTL +K+F K D L+ +L++GG + DQ + DI++ TP Sbjct 162 RALIMSPSRELALQTLKVVKEFGKGTD---LKTVLLVGGDSLEDQFGFMTTNPDIIIATP 218 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS ++++V DEAD L G++ + + + +P Q ++ S Sbjct 219 GRFLHLKVEMSLDLSSIKYVVFDEADRLFEMGFATQLTEILHSLPPSR------QTLLFS 272 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS-HIRT 466 ATL V+ + + P+ V L E + + V + E+ G HI Sbjct 273 ATLPRSLVE-FARAGLQDPSLVRLDAETKISPDLESAFFSV-----KGAEKEGALLHILQ 326 Query 467 DDVHAKDNTRPGANSPEMWSE-----AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 D + T PE + E + K +G A ++ IIF TK + Sbjct 327 DVIKMPTGT------PEGFKEDKDEGSKKRKRGPDRPNAKEKPTEHSTIIFTATKFHVEY 380 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L +Q G ++ +G RK +E F++G L+ TDVAARGIDI Sbjct 381 LTSILVQAG---------YAVSHAYGALDQTARKIQVEDFRRGKTNILVVTDVAARGIDI 431 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 + VIN D+ + +VHR+GR RA + G + SLV+ Sbjct 432 PVLANVINYDFCDQPKVFVHRVGRTARAGQKGWSYSLVS 470 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/59 (51%), Positives = 39/59 (66%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ P + QA+ + +PT IQ +SIPLIL DV+ A TGSGKT AF IP+I+ Sbjct 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIE 150 >sp|Q64060|DDX4_RAT Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1 Length=713 Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/349 (28%), Positives = 161/349 (46%), Gaps = 55/349 (16%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 +T ++F P+ +IV P+REL Q + +K+ +R ++I GG + Sbjct 340 ITASRFKELQEPECIIVAPTRELINQIY---LEARKFSFGTCVRAVVIYGGTQFGHSIRQ 396 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 + G +I+ TPGRL D++ K+ L QV++LVLDEAD +L G+ + ++ + P + Sbjct 397 IVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLIS-CPGMP 455 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 S +R Q ++ SAT ++++L+ + + K++ L Sbjct 456 SKEQR-QTLLFSATFPE-EIQRLAGEFL---------------------------KSNYL 486 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + +G+ DV + + + K V ++ ++ ++F T Sbjct 487 FVAVGQVGGACRDVQ------------QSILQVGPVFKKRKLVEILRNIGDERPMVFVET 534 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K D + + Q+ + S +HGDR+ ER+Q L F+ G L+ T VA Sbjct 535 KKKADFIATFLCQE---------KISTTSIHGDREQREREQALGDFRCGKCPVLVATSVA 585 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ARG+DI V +VIN LP YVHRIGR GR G AIS TE + Sbjct 586 ARGLDIENVQHVINFNLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESD 634 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 34/58 (59%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + + + + + T +Q SIP++L G D++ A+TGSGKT AF +P++ Sbjct 275 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPIL 332 >sp|Q0I1X0|RHLB_HISS1 ATP-dependent RNA helicase RhlB OS=Histophilus somni (strain 129Pt) OX=205914 GN=rhlB PE=3 SV=1 Length=419 Score = 124 bits (312), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 103/336 (31%), Positives = 160/336 (48%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ALI+ P+REL Q N+ + L+ L GG QL V++ G+DI++GT Sbjct 83 PRALILAPTRELVVQIANDANFL---VQATGLKTGLAYGGEGYDKQLKVIDQGIDILIGT 139 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D V G + L ++ +VLDEAD + G+ I + + P +RL ++ Sbjct 140 TGRVIDYVKQGIIRLDYIQVVVLDEADRMFDLGFIRDIRYLLRKCP---VPQQRLTMLF- 195 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M+ P +V+++ P+ R+ E L Sbjct 196 SATL-SYKVRELAFEHMNDPQYVEIE--------------PLQKTGHRIREELFYP---- 236 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +N +M + + +L+ E+ R I IF TK C+ + Y Sbjct 237 ------------SNQDKM-ALLMTLLEEEWPERCI---------IFSNTKHRCEEIWGYL 274 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 GH+ L GD +R L++F G + L+ TDVAARG+ I V + Sbjct 275 -------SADGHRVGL--LTGDVMQKKRLSLLKQFTDGTLDILVATDVAARGLHIPDVTH 325 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LPD+ ++YVHRIGR GRA G++IS E Sbjct 326 VFNYDLPDDCEDYVHRIGRTGRAGESGISISFACEE 361 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS++ + + QA++E + T IQA S+P+ L G D+ A+TG+GKT AF Sbjct 11 FSDLALHRSVQQAIKEKGFEFCTPIQALSLPITLKGQDIAGQAQTGTGKTIAF 63 >sp|P54475|CSHB_BACSU DEAD-box ATP-dependent RNA helicase CshB OS=Bacillus subtilis (strain 168) OX=224308 GN=cshB PE=1 SV=1 Length=438 Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/332 (27%), Positives = 153/332 (46%), Gaps = 58/332 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +I P+RELA Q + + + ++R IGG + + L+ +VVGTP Sbjct 74 QVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQPHLVVGTP 133 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ L++ + LV+DEAD +L G+ ++ + +++P+ LQ++V S Sbjct 134 GRIADLIKEQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMPE------DLQMLVFS 187 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK-TDRLWERLGKSHIRT 466 AT+ +K +K M P + ++ + + H+++P + D+L Sbjct 188 ATIPE-KLKPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRDKDKLLF--------- 237 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D+ + N G I+F TK D++ QY Sbjct 238 -DIMSHLNPYLG-------------------------------IVFANTKNTADHIAQYL 265 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +G LHG P ERK+ +++ + ++I TD+AARGIDI GV + Sbjct 266 TGKG---------MKIGLLHGGLTPRERKKVMKQINDLEFTYIIATDLAARGIDIKGVSH 316 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 VIN LPD+ YVHR+GR RA G A+++ Sbjct 317 VINYELPDDLDFYVHRVGRTARAGSSGQAMTI 348 Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 33/58 (57%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + P I AV + + PTDIQ IP +L V+ ++TG+GKT A+ +P++ Sbjct 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLL 63 >sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=prp5 PE=3 SV=1 Length=1173 Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/352 (27%), Positives = 169/352 (48%), Gaps = 60/352 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + K F K ++ LR + GG +DQ++ L+ G +I+V T Sbjct 615 PIGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIKDQIAELKRGAEIIVCT 671 Query 347 PGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ DL++ G++ NL +V ++VLDEAD + G+ + ++ + V D Q Sbjct 672 PGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI---LSNVRPD---RQT 725 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD--RLWERLGK 461 ++ SAT +++ L+ K + P + + G V + +V N + RL E LG Sbjct 726 VLFSATFPR-NMEALARKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELLG- 783 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 ++++ D E++ +++IF + D Sbjct 784 ------NLYSTD-----------------------------ENEDARSLIFVDRQEAADT 808 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + +++G + C+ +HG + +R +E FK G LI T VAARG+D+ Sbjct 809 LLRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDV 859 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + V+N P+ ++YVHR GR GRA G A++ + ++E+ + + Sbjct 860 KQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKA 911 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/69 (38%), Positives = 44/69 (64%), Gaps = 4/69 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +S+ G+ + ++++ + T IQA++IP I+ G DV+ A+TGSGKT AF IP Sbjct 543 WSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIP---- 598 Query 64 VYETLKDQQ 72 ++ +KDQ+ Sbjct 599 MFRHIKDQR 607 >sp|A4R715|DHH1_PYRO7 ATP-dependent RNA helicase DHH1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DHH1 PE=3 SV=2 Length=535 Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 106/380 (28%), Positives = 167/380 (44%), Gaps = 75/380 (20%) Query 258 LSKAPDG------YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 L++A +G ++V + + N +V++ + LI+ P+RELA QT K K Sbjct 88 LARAKNGTGKTAAFVVPALETINPKVSKIQ-------CLILVPTRELAMQTSQVCKTLGK 140 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 ++ + ++ GG RD + L++ V IVVGTPGR+ DL +LS+ ++DE Sbjct 141 HLG---INVMVTTGGTTLRDDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDE 197 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD LLS ++ I ++ P K QV++ SAT VK+ S+K M P ++L Sbjct 198 ADKLLSIEFTPVIEQLLQFHP------KDRQVMLFSATF-PISVKEFSDKNMTNPYEINL 250 Query 432 KGEDSVPD-TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 E ++ T ++ V K L K I Sbjct 251 MDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQI-------------------------- 284 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 +Q+IIFC + + L + + G +SC H + Sbjct 285 ----------------NQSIIFCNSTNRVELLAKKITELG---------YSCFYSHAKMQ 319 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR Sbjct 320 QQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYG 379 Query 611 RMGLAISLVATEKEKVWYHV 630 +GLAI+L++ E Y++ Sbjct 380 HLGLAINLISWEDRFNLYNI 399 Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F G+ ++ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF +P ++ Sbjct 49 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALET 108 Query 64 V 64 + Sbjct 109 I 109 >sp|Q7Y183|RH10_ORYSJ DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=RH10 PE=2 SV=1 Length=472 Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 107/350 (31%), Positives = 157/350 (45%), Gaps = 65/350 (19%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P A A ++ P+RELA Q +QF+ L +++GGV Q L IV Sbjct 109 PQALFACVLSPTRELAFQI---GQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIV 165 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 VGTPGRL D L T +L+++++LVLDEAD LL+ + ++ + N IP K + Sbjct 166 VGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIP------KERR 219 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH--VVVPVNPKTDRLWERLG 460 + SAT+ + V KL + P V++ + S DT+ VP + K L L Sbjct 220 TFLFSATMTN-KVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVL- 277 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 N PG+ +IF RT C+ Sbjct 278 -------------NELPGS----------------------------MIMIFVRT---CE 293 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + + + +F + + G +R L RFK D LICTDVA+RG+D Sbjct 294 STRLLALTL------RNLRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDVASRGLD 347 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 I GV VIN +P ++YVHR+GR RA G A+SLV + E +W+ + Sbjct 348 IQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLV-NQYEAMWFKM 396 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/70 (49%), Positives = 49/70 (70%), Gaps = 0/70 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+E+GV+PE+ A + M W PT IQAE+IP L G D++ +TGSGKTGAF++P+I Sbjct 41 STFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPII 100 Query 62 QIVYETLKDQ 71 Q + + K Q Sbjct 101 QALLKQDKPQ 110 >sp|A2XKG2|RH10_ORYSI DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. indica OX=39946 GN=RH10 PE=1 SV=1 Length=472 Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 107/350 (31%), Positives = 157/350 (45%), Gaps = 65/350 (19%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P A A ++ P+RELA Q +QF+ L +++GGV Q L IV Sbjct 109 PQALFACVLSPTRELAFQI---GQQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIV 165 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 VGTPGRL D L T +L+++++LVLDEAD LL+ + ++ + N IP K + Sbjct 166 VGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIP------KERR 219 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH--VVVPVNPKTDRLWERLG 460 + SAT+ + V KL + P V++ + S DT+ VP + K L L Sbjct 220 TFLFSATMTN-KVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHVL- 277 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 N PG+ +IF RT C+ Sbjct 278 -------------NELPGS----------------------------MIMIFVRT---CE 293 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + + + +F + + G +R L RFK D LICTDVA+RG+D Sbjct 294 STRLLALTL------RNLRFKAISISGQMSQDKRLGALNRFKTKDCNILICTDVASRGLD 347 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 I GV VIN +P ++YVHR+GR RA G A+SLV + E +W+ + Sbjct 348 IQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLV-NQYEAMWFKM 396 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/70 (49%), Positives = 49/70 (70%), Gaps = 0/70 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+E+GV+PE+ A + M W PT IQAE+IP L G D++ +TGSGKTGAF++P+I Sbjct 41 STFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPII 100 Query 62 QIVYETLKDQ 71 Q + + K Q Sbjct 101 QALLKQDKPQ 110 >sp|A5DU73|PRP28_LODEL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=PRP28 PE=3 SV=1 Length=597 Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 101/352 (29%), Positives = 163/352 (46%), Gaps = 65/352 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-----G 339 N P AL++ P+RELA Q ++F K + L IIGG ++ + ++N G Sbjct 262 NEPLALVLAPTRELALQITQEAEKFGKQLG---FNVLSIIGGRQYQETMDQIDNMIVGRG 318 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ-----V 394 V IVVGTPGRL D V LN S+ +LV+DEAD ++ G+ +N++ N +P+ Sbjct 319 VHIVVGTPGRLLDSVERKILNFSKCYYLVMDEADRMIDMGFEKDLNKLINLLPKNEKLST 378 Query 395 TSDGKRLQV-----IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV--HHVVVP 447 T DGK + ++ +AT+ S ++K+++ + P ++ + G D + H + Sbjct 379 TIDGKLFHLTKRLTMMYTATI-SPPIEKITKSYLIDPAYIYIGGAGEALDNIDQHFDYLS 437 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 ++ RL S+ IK+++G + ++ Sbjct 438 TYAESARL------------------------------SKLIKVVQGHK-----RRNRNA 462 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 IIF K CD L Q + V +HG + R++ LE F+ Sbjct 463 LVIIFANFKHVCDVLSLELEQ---------NNLLNVVIHGSKSQEAREEALEDFRTHQAP 513 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 L+ TDVAARGID+ V VIN + + Y+HRIGR GRA +G + + + Sbjct 514 ILVATDVAARGIDVPNVSLVINYQMSKKFDEYIHRIGRTGRAGNLGESYTFL 565 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 39/62 (63%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 ++ E G+ P+I +++ + PT +Q SIP+ L DV+ AETGSGKT AF +P++ Sbjct 186 SWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLH 245 Query 63 IV 64 + Sbjct 246 YL 247 >sp|P87206|IF4A_CANAL ATP-dependent RNA helicase eIF4A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=TIF1 PE=3 SV=1 Length=397 Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 101/335 (30%), Positives = 154/335 (46%), Gaps = 58/335 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +ALI+ P+RELA Q N I Y+ K+ IGG + D + +GV IVVG Sbjct 91 ATQALILAPTRELALQIKNVITAIGLYL---KVTVHASIGGTSMSDDIEAFRSGVQIVVG 147 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ +V+ +LDEAD +LS G+ + I + +P+ T Q+++ Sbjct 148 TPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETT------QIVL 201 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M+ P + +K ++ + + + V Sbjct 202 LSATMPQ-DVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINV----------------- 243 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 E+ L Y ++ QA+IFC T+ + L Sbjct 244 -----------------ELEDYKFDCLCDLYDSISVT-----QAVIFCNTRSKVEFLTNK 281 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +Q F+ +H D ER ++ F+ G R LI TD+ ARGID+ V Sbjct 282 LREQ---------HFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVS 332 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 VIN LP K+NY+HRIGR GR R G+AI+ V Sbjct 333 LVINYDLPANKENYIHRIGRGGRFGRKGVAINFVT 367 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (54%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query 64 VYETLKDQQ 72 + E K Q Sbjct 85 INENEKATQ 93 >sp|A3GFI4|IF4A_PICST ATP-dependent RNA helicase eIF4A OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=TIF1 PE=3 SV=1 Length=397 Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/339 (29%), Positives = 157/339 (46%), Gaps = 59/339 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + +ALI+ P+RELA Q N I Y++ IGG + +D + +GV +VVG Sbjct 91 STQALILAPTRELALQIKNVITSIGLYLNVTVHAS---IGGTSMQDDIEAFRSGVQVVVG 147 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ +V+ ++DEAD +LS G+ + I + +P+ T QV++ Sbjct 148 TPGRVFDMIERRYFKTEKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETT------QVVL 201 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M+ P + +K ++ + + + V Sbjct 202 LSATMPQ-DVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINV----------------- 243 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 E+ L Y ++ QA+IFC T+ + L Sbjct 244 -----------------ELEDYKFDCLCDLYDSISVT-----QAVIFCNTRSKVEFLTTK 281 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 K F+ +H D ER ++ F+ G R LI TD+ ARGID+ V Sbjct 282 L---------KAENFTVSAIHADLPQAERDTIMKEFRSGSSRILIATDLLARGIDVQQVS 332 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VIN LP K+NY+HRIGR GR R G+AI+ V TE++ Sbjct 333 LVINYDLPSNKENYIHRIGRGGRFGRKGVAINFV-TERD 370 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 37/69 (54%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query 64 VYETLKDQQ 72 + E K Q Sbjct 85 IDENEKSTQ 93 >sp|Q1E5R1|DHH1_COCIM ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis (strain RS) OX=246410 GN=DHH1 PE=3 SV=1 Length=512 Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 103/368 (28%), Positives = 167/368 (45%), Gaps = 73/368 (20%) Query 258 LSKAPDG------YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 L++A +G +++ + N ++++T+ ALI+ P+RELA QT K K Sbjct 88 LARAKNGTGKTAAFVIPTLERTNPKISKTQ-------ALILVPTRELALQTSQVCKTLGK 140 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 ++ + ++ GG +D + L + V I+VGTPGR+ DL S G +LS+ V+DE Sbjct 141 HLG---INVMVTTGGTGLQDDIIRLSDTVHIIVGTPGRILDLASKGVADLSECTTFVMDE 197 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD LLS ++ I ++ + P K QV++ SAT VK +K M P ++L Sbjct 198 ADKLLSPEFTPVIEQLLSFHP------KDRQVMLFSATF-PMIVKSFKDKHMRNPYEINL 250 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E ++ + + ER VH + ++S+ Sbjct 251 MDELTLRGITQYYAF--------VEER--------QKVHCLNT---------LFSKL--- 282 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 +++Q+IIFC + + L + + G +SC H Sbjct 283 -------------QINQSIIFCNSTNRVELLAKKITELG---------YSCFYSHARMLQ 320 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR Sbjct 321 QNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGH 380 Query 612 MGLAISLV 619 +GLAI+L+ Sbjct 381 LGLAINLI 388 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLE 107 >sp|Q6FQU5|DHH1_CANGA ATP-dependent RNA helicase DHH1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DHH1 PE=3 SV=1 Length=507 Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/335 (30%), Positives = 152/335 (45%), Gaps = 60/335 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT I+ ++ + ++ GG RD + L V ++V Sbjct 98 NKIQALIMVPTRELALQTSQVIRTLGRHCG---VSCMVTTGGTNLRDDILRLNETVHVLV 154 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL S +LS+ V+DEAD +LS+ + I ++ +P K Q + Sbjct 155 GTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKTIIEQVLTFLP------KAHQSL 208 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK+ K +H P ++L E ++ + E K H Sbjct 209 LFSATF-PLTVKEFMVKHLHKPYEINLMEELTLKGITQYYA---------FVEERQKLHC 258 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 NT ++S+ +++QAIIFC + + L + Sbjct 259 L--------NT--------LFSKL----------------QINQAIIFCNSTNRVELLAK 286 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G +SC H K +R + F++G VR L+C+D+ RGIDI V Sbjct 287 KITDLG---------YSCYYSHARMKQQDRNKVFHDFRQGKVRTLVCSDLLTRGIDIQAV 337 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN P + Y+HRIGR GR +GLAI+L+ Sbjct 338 NVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI 372 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/70 (33%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + E+ + E + P+ IQ E+IP+ + G D+L A+ G+GKT AF IP ++ Sbjct 32 SFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 91 Query 63 IVYETLKDQQ 72 + L Q Sbjct 92 KIKPKLNKIQ 101 >sp|B0UUZ9|RHLB_HISS2 ATP-dependent RNA helicase RhlB OS=Histophilus somni (strain 2336) OX=228400 GN=rhlB PE=3 SV=1 Length=419 Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 103/336 (31%), Positives = 160/336 (48%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ALI+ P+REL Q N+ + L+ L GG QL V++ G+DI++GT Sbjct 83 PRALILAPTRELVVQIANDANFL---VQATGLKTGLAYGGEGYDKQLKVIDRGIDILIGT 139 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D V G + L ++ +VLDEAD + G+ I + + P +RL ++ Sbjct 140 TGRVIDYVKQGIIRLDYIQVVVLDEADRMFDLGFIRDIRYLLRKCP---VPQQRLTMLF- 195 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M+ P +V+++ P+ R+ E L Sbjct 196 SATL-SYKVRELAFEHMNDPQYVEIE--------------PLQKTGHRIREELFYP---- 236 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +N +M + + +L+ E+ R I IF TK C+ + Y Sbjct 237 ------------SNQDKM-ALLMTLLEEEWPERCI---------IFSNTKHRCEEIWGYL 274 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 GH+ L GD +R L++F G + L+ TDVAARG+ I V + Sbjct 275 -------SADGHRVGL--LTGDVMQKKRLSLLKQFTDGTLDVLVATDVAARGLHIPDVTH 325 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LPD+ ++YVHRIGR GRA G++IS E Sbjct 326 VFNYDLPDDCEDYVHRIGRTGRAGESGISISFACEE 361 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS++ + + QA++E + T IQA S+P+ L G D+ A+TG+GKT AF Sbjct 11 FSDLALHRIVQQAIKEKGFEFCTPIQALSLPITLKGQDIAGQAQTGTGKTIAF 63 >sp|Q4JG17|VASAL_PENVA Probable ATP-dependent RNA helicase vasa-like OS=Penaeus vannamei OX=6689 GN=vasa PE=2 SV=2 Length=703 Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 94/343 (27%), Positives = 153/343 (45%), Gaps = 55/343 (16%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P L++ P+RELA Q + ++ +K+ + + + GG A QL + +G I+ Sbjct 336 PAQPTGLVICPTRELAIQIM---REARKFSHSSVAKCCVAYGGAAGFHQLKTIHSGCHIL 392 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGRL D + GK+ S +++LVLDEAD +L G+ I + N +T +R+ + Sbjct 393 VATPGRLLDFLEKGKIVFSSLKYLVLDEADRMLDMGFLSSIKTVINH-KTMTPTAERITL 451 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV--VPVNPKTDRLWERLGK 461 + + H ++++L+ ++ +V + + V V VP K +L E + Sbjct 452 MFSATFPH--EIQELASAFLNNYLFVVVGTVGAANTDVKQEVLCVPKFEKKAKLVEMCEE 509 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 I DD ++ ++F K D Sbjct 510 ILISADD--------------------------------------EKILVFVEQKRVADF 531 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + Y ++ +F +HGDR +R+Q L F+ G L+ T V ARG+DI Sbjct 532 VGTYLCEK---------KFRATTMHGDRYQAQREQALSEFRTGVHNILVATAVTARGLDI 582 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 G+ V+N LP + YVHRIGR GR GL+IS E + Sbjct 583 KGIGVVVNYDLPKDIDEYVHRIGRTGRLGNRGLSISFYDDETD 625 Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 20/65 (31%), Positives = 39/65 (60%), Gaps = 0/65 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + P + + + + + PT +Q +IP ++ G D++ A+TGSGKT AF +P++ Sbjct 262 SFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMACAQTGSGKTAAFLLPMLH 321 Query 63 IVYET 67 + + Sbjct 322 YILDN 326 >sp|A7TS37|RRP3_VANPO ATP-dependent rRNA helicase RRP3 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=RRP3 PE=3 SV=1 Length=506 Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 102/364 (28%), Positives = 159/364 (44%), Gaps = 59/364 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A I+ P+RELA+Q + +R I+GG+ DQ L I++ TPG Sbjct 157 ACILAPTRELAQQIKETFDSLGSLMG---VRSACIVGGMNMMDQARDLMRKPHIIIATPG 213 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T +L +++FLV+DEAD LL + ++R+ IP + G+ + S Sbjct 214 RLMDHLENTRGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIP---TQGR--TTYLFS 268 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ S + KL + P + + DT+ ++ V Sbjct 269 ATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVV------------------- 308 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 PG LK Y + + E I+F RTK + + + Sbjct 309 ---------PGG------------LKNTYLIYLMNEFIGKTIIVFTRTKANAERITTL-- 345 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +FS LHGD ++R +L+ FK G L+ TDVAARG+DI V V Sbjct 346 -------ANLLEFSATALHGDLNQNQRTGSLDLFKAGRRSILVATDVAARGLDIPSVDIV 398 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDG 647 IN +P + ++Y+HR+GR RA R G +ISLV+ ++ + GK + +D Sbjct 399 INYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGKKLPKENVNKDA 458 Query 648 GCTI 651 T+ Sbjct 459 ILTL 462 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/70 (43%), Positives = 49/70 (70%), Gaps = 3/70 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ ++PE+ +A + +++ PT IQA SIP L G D++ A+TGSGKT AF+IP++ Sbjct 87 SFSDLDLVPELIEACKNLNFAKPTPIQARSIPPALQGHDIIGLAQTGSGKTAAFAIPILN 146 Query 63 IVYETLKDQQ 72 ++ DQQ Sbjct 147 RLWH---DQQ 153 >sp|Q6GWX0|DDX4_PIG Probable ATP-dependent RNA helicase DDX4 OS=Sus scrofa OX=9823 GN=DDX4 PE=2 SV=1 Length=722 Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/349 (29%), Positives = 166/349 (48%), Gaps = 55/349 (16%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 +T ++F P+ +IV P+REL Q + +K+ +R ++I GG + Sbjct 353 ITASRFKELQEPECIIVAPTRELVNQIY---LEARKFSFGTCVRAVVIYGGTQLGHSIRQ 409 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 + G +I+ TPGRL D++ K+ L Q+++LVLDEAD +L G+ + ++ + P + Sbjct 410 IVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLIS-CPGMP 468 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 S +R Q ++ SAT ++++L+ + + K++ L Sbjct 469 SKEQR-QTLMFSATFPE-EIQRLAAEFL---------------------------KSNYL 499 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + +G+ DV D + G +S+ K+L+ +R I + + ++F T Sbjct 500 FVAVGQVGGACRDVQQAD-LQVG-----QYSKREKLLE---ILRNIGDER---TMVFVET 547 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K D + + Q+ + S +HGDR+ ER+Q L F+ G L+ T VA Sbjct 548 KKKADFIATFLCQE---------KISTTSIHGDREQREREQALGDFRFGKCPVLVATSVA 598 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ARG+DI V +VIN LP YVHRIGR GR G AIS E + Sbjct 599 ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESD 647 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (59%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + + + + + T +Q SIP+IL G D++ A+TGSGKT AF +P++ Sbjct 288 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPIL 345 >sp|A2QIL2|PRP28_ASPNC Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=prp28 PE=3 SV=1 Length=810 Score = 127 bits (320), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 96/366 (26%), Positives = 165/366 (45%), Gaps = 71/366 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q K+F + + I+GG + +Q L +G +I++ Sbjct 449 DGPYAIVLAPTRELAQQIEIEAKKFTGPLG---FNVVSIVGGHSLEEQAYSLRDGAEIII 505 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP------------ 392 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P Sbjct 506 ATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEDAE 565 Query 393 -------QVTSDGKRL-QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + D R Q ++ +AT+ + V++++ K + P V + DTV Sbjct 566 NPLAMSRHINHDQHRYRQTMMYTATMPTA-VERIARKYLRRPAIVTIGSAGEAVDTVEQR 624 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + + D+ +RLG D+ + GE+ Sbjct 625 VEMIAGE-DKRKKRLG-------DI---------------------LSSGEFRA------ 649 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 I+F K +CD + + Q G FS V LHG + +R+ L + G Sbjct 650 ---PIIVFVNIKRNCDAIAREIKQWG---------FSSVTLHGSKTQDQREAALASVRNG 697 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TD+A RGID+ V V+N + ++Y HRIGR GRA + G+AI+ + E Sbjct 698 TTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDA 757 Query 625 KVWYHV 630 V Y + Sbjct 758 DVMYDL 763 Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E + + + + + + PT IQ +IP+ + D++ A TGSGKT AF +P+ Sbjct 371 MRSWDESNLPKRLMELINRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPL 430 Query 61 IQIVYE 66 + + E Sbjct 431 LCYIAE 436 >sp|Q9M2E0|RH12_ARATH DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana OX=3702 GN=RH12 PE=2 SV=1 Length=498 Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 153/346 (44%), Gaps = 60/346 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +A+I+ P+RELA QT K+ KY++ ++ ++ GG + RD + L V ++V Sbjct 191 NVIQAMILVPTRELALQTSQVCKELSKYLN---IQVMVTTGGTSLRDDIMRLHQPVHLLV 247 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL G L LV+DEAD LLS + + + +PQ Q + Sbjct 248 GTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQ------NRQFL 301 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK ++ + P ++L + ++ + + ER Sbjct 302 MFSATF-PVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAF--------VEER------ 346 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 VH + ++S+ +++Q+IIFC + + L + Sbjct 347 --QKVHCLNT---------LFSKL----------------QINQSIIFCNSVNRVELLAK 379 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G +SC +H R + F+ G R L+CTD+ RGIDI V Sbjct 380 KITELG---------YSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAV 430 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VIN P ++Y+HR+GR GR +GLA++LV E Y Sbjct 431 NVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQT 476 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ + + E + P+ IQ ESIP+ L G D+L A+ G+GKTGAF IPV++ Sbjct 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLE 184 >sp|P54823|DDX6_MOUSE Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus OX=10090 GN=Ddx6 PE=1 SV=1 Length=483 Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 151/333 (45%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+++ P+RELA Q Q K++ K+ + GG RD + L++ V +V+ TP Sbjct 166 QAMVIVPTRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATP 223 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ G + V+ +VLDEAD LLSQ DF+ M + I + K Q+++ S Sbjct 224 GRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTLP---KNRQILLYS 277 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+K + P ++L E ++ + + ER Sbjct 278 ATF-PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAY--------VTER--------Q 320 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 VH + ++S +++Q+IIFC + + L + Sbjct 321 KVHCLNT---------LFSRL----------------QINQSIIFCNSSQRVELLAKKIS 355 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q G +SC +H + R + F+ G R L+CTD+ RGIDI V V Sbjct 356 QLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVV 406 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN P + Y+HRIGR GR +GLAI+L+ Sbjct 407 INFDFPKLAETYLHRIGRSGRFGHLGLAINLIT 439 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE 156 >sp|Q4HW67|DHH1_GIBZE ATP-dependent RNA helicase DHH1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DHH1 PE=3 SV=1 Length=486 Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/343 (29%), Positives = 154/343 (45%), Gaps = 60/343 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ P+RELA QT K K++ + ++ GG RD + L++ V IVVGTP Sbjct 112 QCLILVPTRELAMQTSQVCKTLGKHLG---INVMVTTGGTGLRDDIIRLQDPVHIVVGTP 168 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL +LS+ ++DEAD LLS ++ I ++ P K QV++ S Sbjct 169 GRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHP------KDRQVMLFS 222 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT VK S+K M P ++L E ++ + E K H Sbjct 223 ATF-PLSVKDFSDKNMVSPYEINLMDELTLRGITQYYA---------FVEEKQKVHCL-- 270 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 NT ++S+ +++Q+IIFC + + L + Sbjct 271 ------NT--------LFSKL----------------QINQSIIFCNSTNRVELLAKKIT 300 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G +SC H + H R + F+ G R L+C+D+ RGIDI V V Sbjct 301 ELG---------YSCFYSHAKMQQHARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVV 351 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 IN P + Y+HRIGR GR +GLAI+L+ + Y++ Sbjct 352 INFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNI 394 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + ++ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 44 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLE 102 >sp|A5DF03|PRP28_PICGU Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PRP28 PE=3 SV=2 Length=575 Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 99/359 (28%), Positives = 167/359 (47%), Gaps = 49/359 (14%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q K+F + + IIGG + + +++G IVV TPGR Sbjct 236 LVLAPTRELALQISKEAKKFASVLG---YNVVTIIGGHQYEETVKSVQDGAHIVVATPGR 292 Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG----------K 399 L D G ++LSQ L +DEAD ++ G+ + + + +P +S G K Sbjct 293 LIDSAEKGLIDLSQCYHLTMDEADRMIDMGFEKALQSILSFLPSTSSSGFGLDSTIFKVK 352 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 ++ +AT+ S ++K+++ + P ++ + + D ++ +E L Sbjct 353 SRITLMFTATI-SPPIEKITKDYLQTPAYLYIGDAGEIVDNINQK-----------FEYL 400 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 G D+V +++ N+P ++ I L+ + I+E + IIF K C Sbjct 401 G------DNVDSQEEL----NAPRT-NKMISALR-----QHIRETEQPLIIIFANFKRTC 444 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L Q G S + +HG + R+ + F++ V LI TDVAARGI Sbjct 445 ELLSVELSNQNVG--------SNIVIHGSKSQEARESAIASFREHKVNVLIATDVAARGI 496 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 DI V V+N +P Y+HRIGR GRA + G ++S V ++ ++ S KG Sbjct 497 DIPNVSLVVNYHMPKRFDEYIHRIGRTGRAGKSGASLSFVDDGDSEILVNLKSFLSKGT 555 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/73 (37%), Positives = 42/73 (58%), Gaps = 0/73 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ E G+ + ++++ + PT IQ +IP LG DV+ AETGSGKT AF IP+ Sbjct 149 LRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPL 208 Query 61 IQIVYETLKDQQE 73 + + KD E Sbjct 209 LSYLSAIDKDYME 221 >sp|Q38F76|IF4A_TRYB2 Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=Tb09.160.3270 PE=3 SV=1 Length=404 Score = 123 bits (309), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 109/377 (29%), Positives = 170/377 (45%), Gaps = 86/377 (23%) Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYI-DNPKLRELLIIGGVAARDQLSVLENGV 340 F N + L++ P+RELA QT I + +++ + +GG +D L++G Sbjct 90 FRHNVLQGLVLSPTRELAMQTAEVITRIGEFLAEGSSSFCATFVGGTRVQDDYRKLQSGT 149 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 + VGTPGR+ D+ G + +R LVLDEAD +LSQG+++ I + +P K Sbjct 150 IVAVGTPGRVVDVTKRGAMRTESLRVLVLDEADEMLSQGFAEQIYDIFRFLP------KE 203 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 +QV + SAT+ DV +L++K M Sbjct 204 IQVALFSATMPD-DVLELTKKFM------------------------------------- 225 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD------------Q 508 +D TR + E IK ++ + +EHK+D Q Sbjct 226 -----------RDPTRILVKRESLTLEGIK----QFFIAVEEEHKLDTLMDLYETVSIAQ 270 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 ++IF T+ D L + H SC +H + ER++ + F+ G R Sbjct 271 SVIFANTRRKVDWLASQL-------NSSNHTVSC--MHSEMSKQEREKVMGTFRNGSSRV 321 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TD+ ARGID+H V VIN LP K+NY+HRIGR GR R G+AI+ V + +V Sbjct 322 LVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTQKDVEVLR 381 Query 629 HVCSSRGKGCYNTRLKE 645 + S Y+T+++E Sbjct 382 EIESH-----YHTQIEE 393 Score = 42.4 bits (98), Expect = 0.014, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQ 62 +Q Sbjct 85 LQ 86 >sp|A7TGW7|DBP10_VANPO ATP-dependent RNA helicase DBP10 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP10 PE=3 SV=1 Length=977 Score = 127 bits (320), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 103/356 (29%), Positives = 162/356 (46%), Gaps = 48/356 (13%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QT K+F K LR +L+ GG + DQ S++ + D++V TP Sbjct 193 RAVILSPSRELALQTHRVFKEFSK---GTHLRSVLLTGGDSLEDQFSMMMSNPDVIVATP 249 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+L V ++V DEAD L G+ + +N + +P Q ++ S Sbjct 250 GRFLHLKVEMSLDLKTVEYVVFDEADRLFEMGFQEQLNELLAALPM------NRQTLLFS 303 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV-------------------VVPV 448 ATL S V ++ + P V L E + + + + V+ + Sbjct 304 ATLPSSLVD-FAKAGLTNPVLVRLDAETKISENLEILFLSTKNEERENNLLYLLQDVIKI 362 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY---AVRAIKEHK 505 TD ++L + D ++D G + K KG++ V A E Sbjct 363 PLGTDDQIKKLSDFNKSLSDSDSEDEDNKGKQNSR------KSKKGKFQKLKVSASNELP 416 Query 506 MDQA-IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 +++ I+F T+ + + Q G F L+G H RK+ L F+ G Sbjct 417 TEKSTIVFAPTRHHVEYITQLLKDSG---------FLVSYLYGTLDQHARKRQLLNFRAG 467 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 L+ TDVAARG+DI + VIN +LP + ++HR+GR RA G A S+V+ Sbjct 468 LTSILVVTDVAARGVDIPMLANVINYSLPASSKIFIHRVGRTARAGNRGWAYSIVS 523 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/60 (42%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F G I V + + PT IQ ++IPLIL D++ A TGSGKT AF +P+I+ Sbjct 122 SFPSFGFSKLILSNVHKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIE 181 >sp|Q4R5S7|DDX4_MACFA Probable ATP-dependent RNA helicase DDX4 OS=Macaca fascicularis OX=9541 GN=DDX4 PE=2 SV=1 Length=725 Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 94/338 (28%), Positives = 156/338 (46%), Gaps = 54/338 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ +IV P+REL Q + +K+ +R ++I GG + + G +I+ T Sbjct 367 PECIIVAPTRELVNQIY---LEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCAT 423 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ K+ L Q+++LVLDEAD +L G+ + ++ + P + S +R Q ++ Sbjct 424 PGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLIS-CPGMPSKEQR-QTLMF 481 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT ++++L+ + + K++ L+ +G+ Sbjct 482 SATFPE-EIQRLAAEFL---------------------------KSNYLFVAVGQVGGAC 513 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 DV + + + K E V ++ ++ ++F TK D + + Sbjct 514 RDVQ------------QTVLQVGQFSKREKLVEILRNIGDERTMVFVETKKKADFIATFL 561 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 Q+ + S +HGDR+ ER+Q L F+ G L+ T VAARG+DI V + Sbjct 562 CQE---------KISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQH 612 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VIN LP YVHRIGR GR G AIS E + Sbjct 613 VINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESD 650 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 34/58 (59%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + + + + + T +Q SIP+IL G D++ A+TGSGKT AF +P++ Sbjct 291 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPIL 348 >sp|A4QYM6|DRS1_PYRO7 ATP-dependent RNA helicase DRS1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DRS1 PE=3 SV=1 Length=790 Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 109/388 (28%), Positives = 173/388 (45%), Gaps = 62/388 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +I+ P+RELA Q + + D ++ L +GG++ + Q S L D+++ TP Sbjct 328 RVVILAPTRELAIQCHAVATKLASHTD---IKFCLAVGGLSLKVQESELRLRPDVIIATP 384 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + V LVLDEAD +L G++D +N + +P K Q ++ Sbjct 385 GRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLP------KSRQTMLF 438 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ S V L ++ P + + D+ VV + + RL Sbjct 439 SATMTS-SVDNLIRVGLNKPVRL-------MVDSQKKTVVTLTQEFVRL----------- 479 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 RPG M Y V K ++ IIF R K + F Sbjct 480 ---------RPGREEKRMG----------YLVYLCKNLYTERVIIFFRQKKIAHHARIIF 520 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G SC LHG +R Q++E F+ G V FL+ TD+A+RG+DI GV Sbjct 521 GLLG---------LSCAELHGSMSQIQRIQSVEAFRDGKVSFLLATDLASRGLDIKGVDT 571 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW-YHVCSSRGKGC-YNTRLK 644 VIN P + YVHR+GR RA R G AI+L A KV V + + +G ++R+ Sbjct 572 VINYEAPQSLEIYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAGKAQGAKISSRII 631 Query 645 EDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 + W + + E+E+ + + + Sbjct 632 DAADADSWQAK---IDELEDEVEAVMRE 656 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A+F M + I + + + + PT IQ+++IP+ L G DV+ A TGSGKT AF +P++ Sbjct 255 ASFQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL 314 Query 62 Q 62 + Sbjct 315 E 315 >sp|Q5ZKB9|DDX6_CHICK Probable ATP-dependent RNA helicase DDX6 OS=Gallus gallus OX=9031 GN=DDX6 PE=2 SV=1 Length=483 Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 151/333 (45%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+++ P+RELA Q Q K++ K+ + GG RD + L++ V +V+ TP Sbjct 166 QAMVIVPTRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATP 223 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ G + V+ +VLDEAD LLSQ DF+ M + I + K Q+++ S Sbjct 224 GRILDLIKKGVAKVEHVQMIVLDEADKLLSQ---DFVQIMEDIILTLP---KNRQILLYS 277 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+K + P ++L E ++ + + ER Sbjct 278 ATF-PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAY--------VTER--------Q 320 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 VH + ++S +++Q+IIFC + + L + Sbjct 321 KVHCLNT---------LFSRL----------------QINQSIIFCNSSQRVELLAKKIS 355 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q G +SC +H + R + F+ G R L+CTD+ RGIDI V V Sbjct 356 QLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVV 406 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN P + Y+HRIGR GR +GLAI+L+ Sbjct 407 INFDFPKLAETYLHRIGRSGRFGHLGLAINLIT 439 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE 156 >sp|Q2UQI6|DRS1_ASPOR ATP-dependent RNA helicase drs1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=drs1 PE=3 SV=2 Length=820 Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 106/388 (27%), Positives = 176/388 (45%), Gaps = 62/388 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + I+ P+RELA Q N + Y D + ++GG + R+Q ++L+ D+++ TP Sbjct 375 RVAILMPTRELAVQCYNVATKLATYTD---ITFCQLVGGFSLREQENILKKRPDVIIATP 431 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + + LVLDEAD +L G++D +N + IP K Q ++ Sbjct 432 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIP------KSRQTMLF 485 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ V KL ++ P + + DS +T +++ + + RL Sbjct 486 SATMTD-SVDKLIRVGLNRPVRLMV---DSKKNTSMNLI--------QEFVRL------- 526 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 RPG + Y + KE + I+F R K + + F Sbjct 527 ---------RPGREDKRLG----------YLLHLCKEVYTGRVIVFFRQKKEAHRVRIAF 567 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G LHG +R +++E F++G V FL+ TD+AARG+DI GV Sbjct 568 GLLG---------LKAAELHGSMSQEQRIRSVENFREGKVSFLLATDLAARGLDIKGVET 618 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW-YHVCSSRGKGC-YNTRLK 644 VIN P + Y+HR+GR RA R G A ++ A KV V +S+ +G +R+ Sbjct 619 VINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASKAQGAKVASRVV 678 Query 645 EDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 + W Q ++EE +N + + Sbjct 679 DPAVADRW---AQKAKDLEEEINAVLEE 703 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 39/60 (65%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P+++ Sbjct 303 SFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 362 >sp|Q7S5D9|DHH1_NEUCR ATP-dependent RNA helicase dhh1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-10 PE=3 SV=3 Length=569 Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/343 (29%), Positives = 153/343 (45%), Gaps = 60/343 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ P+RELA QT K K++ + ++ GG RD + L++ V IVVGTP Sbjct 115 QCLILVPTRELAMQTSQVCKTLGKHLG---INVMVTTGGTGLRDDIVRLQDPVHIVVGTP 171 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL +LS+ ++DEAD LLSQ ++ I ++ P K QV++ S Sbjct 172 GRILDLAGKQVADLSECPMFIMDEADKLLSQEFTPVIEQLLQFHP------KDRQVMLFS 225 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT VK S+K M P ++L E ++ + E K H Sbjct 226 ATF-PLSVKDFSDKNMTSPYEINLMDELTLRGITQYYA---------FVEEKQKVHCL-- 273 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 NT ++S+ +++Q+IIFC + + L + Sbjct 274 ------NT--------LFSKL----------------QINQSIIFCNSTNRVELLAKKIT 303 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G +SC H R + F+ G R L+C+D+ RGIDI V V Sbjct 304 ELG---------YSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVV 354 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 IN P + Y+HRIGR GR +GLAI+L+ + Y++ Sbjct 355 INFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNI 397 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 P+ IQ E+IP+ L G D+L A+ G+GKT AF IP + Sbjct 68 PSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPAL 104 >sp|Q9NQI0|DDX4_HUMAN Probable ATP-dependent RNA helicase DDX4 OS=Homo sapiens OX=9606 GN=DDX4 PE=1 SV=2 Length=724 Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 96/349 (28%), Positives = 161/349 (46%), Gaps = 55/349 (16%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 +T ++F P+ +IV P+REL Q + +K+ +R ++I GG + Sbjct 355 ITASRFKELQEPECIIVAPTRELVNQIY---LEARKFSFGTCVRAVVIYGGTQLGHSIRQ 411 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 + G +I+ TPGRL D++ K+ L Q+++LVLDEAD +L G+ + ++ + P + Sbjct 412 IVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLIS-CPGMP 470 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 S +R Q ++ SAT ++++L+ + + K++ L Sbjct 471 SKEQR-QTLMFSATFPE-EIQRLAAEFL---------------------------KSNYL 501 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + +G+ DV + + + K E V ++ ++ ++F T Sbjct 502 FVAVGQVGGACRDVQ------------QTVLQVGQFSKREKLVEILRNIGDERTMVFVET 549 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K D + + Q+ + S +HGDR+ ER+Q L F+ G L+ T VA Sbjct 550 KKKADFIATFLCQE---------KISTTSIHGDREQREREQALGDFRFGKCPVLVATSVA 600 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ARG+DI V +VIN LP YVHRIGR GR G AIS E + Sbjct 601 ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESD 649 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/59 (36%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + + + + + T +Q SIP+IL G D++ A+TGSGKT AF +P++ Sbjct 289 TFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPIL 347 >sp|P26196|DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 OS=Homo sapiens OX=9606 GN=DDX6 PE=1 SV=2 Length=483 Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 151/333 (45%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+++ P+RELA Q Q K++ K+ + GG RD + L++ V +V+ TP Sbjct 166 QAMVIVPTRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATP 223 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ G + V+ +VLDEAD LLSQ DF+ M + I + K Q+++ S Sbjct 224 GRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTLP---KNRQILLYS 277 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+K + P ++L E ++ + + ER Sbjct 278 ATF-PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAY--------VTER--------Q 320 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 VH + ++S +++Q+IIFC + + L + Sbjct 321 KVHCLNT---------LFSRL----------------QINQSIIFCNSSQRVELLAKKIS 355 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q G +SC +H + R + F+ G R L+CTD+ RGIDI V V Sbjct 356 QLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVV 406 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN P + Y+HRIGR GR +GLAI+L+ Sbjct 407 INFDFPKLAETYLHRIGRSGRFGHLGLAINLIT 439 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE 156 >sp|Q0UWC8|PRP28_PHANO Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=PRP28 PE=3 SV=1 Length=746 Score = 127 bits (318), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 96/362 (27%), Positives = 166/362 (46%), Gaps = 69/362 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q ++F + +I+GG + +Q + +G +IV+ Sbjct 402 DGPYAIVLAPTRELAQQIEVETRKFAAPLG---FNTAVIVGGHSIEEQAFQMRDGAEIVI 458 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD------- 397 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P VT++ Sbjct 459 ATPGRLVDCIERRMLVLSQCTYVIMDEADRMIDMGFEEPVNKILDALP-VTNEKPDSDAA 517 Query 398 --------GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 G Q ++ +AT+ + V++++ K + P V + +TV V Sbjct 518 EDPNAMKRGMYRQTMMYTATMPTA-VERIARKYLRRPAIVTIGNVGEAVETVEQRV---- 572 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK-GEYAVRAIKEHKMDQ 508 HI+ ++ K +IL GE+ Sbjct 573 ------------EHIQGEEKRKK--------------RLQEILNSGEFT---------PP 597 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 I+F K +CD + + D K FS V LHG + +R+ L + ++ V Sbjct 598 IIVFVNIKRNCDAIAR---------DIKNMGFSSVTLHGSKTQEQREAALAQLREHRVDV 648 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TD+A RGIDI V V+N + ++Y HRIGR GRA + G+AI+ E V Y Sbjct 649 LVATDLAGRGIDITDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFWGNEDADVLY 708 Query 629 HV 630 + Sbjct 709 DL 710 Score = 41.6 bits (96), Expect = 0.030, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M + E G+ ++ + VE + + P+ +Q +IP+ L D++ A TGSGKT +F +P+ Sbjct 326 MRNWQESGLPDKVLRLVEHVGYAEPSAVQRAAIPIALQCRDLIGVAVTGSGKTASFVLPL 385 Query 61 I 61 + Sbjct 386 L 386 >sp|Q94BV4|RH6_ARATH DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana OX=3702 GN=RH6 PE=2 SV=2 Length=528 Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 96/345 (28%), Positives = 153/345 (44%), Gaps = 60/345 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +A+I+ P+RELA QT K+ KY+ K+ ++ GG + RD + L V ++V Sbjct 221 NVIQAVILVPTRELALQTSQVCKELSKYL---KIEVMVTTGGTSLRDDIMRLYQPVHLLV 277 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL G L LV+DEAD LLS + I + +P+ Q++ Sbjct 278 GTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESR------QIL 331 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK ++ + P ++L + ++ + + ER Sbjct 332 MFSATF-PVTVKSFKDRYLKKPYIINLMDQLTLMGVTQYYAF--------VEER------ 376 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 VH + ++S+ +++Q+IIFC + + L + Sbjct 377 --QKVHCLNT---------LFSKL----------------QINQSIIFCNSVNRVELLAK 409 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G +SC +H R + F+ G R L+CTD+ RGIDI V Sbjct 410 KITELG---------YSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 460 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 VIN P ++Y+HR+GR GR +GLA++LV E Y Sbjct 461 NVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQ 505 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ + + E + P+ IQ ESIP+ L G D+L A+ G+GKTGAF IP ++ Sbjct 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLE 214 >sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRP3 PE=1 SV=2 Length=501 Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 147/333 (44%), Gaps = 59/333 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A I+ P+RELA+Q + +R I+GG+ DQ L I++ TPG Sbjct 152 ACILAPTRELAQQIKETFDSLGSLMG---VRSTCIVGGMNMMDQARDLMRKPHIIIATPG 208 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T +L +++FLV+DEAD LL + ++R+ IP + + S Sbjct 209 RLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT-----QERTTYLFS 263 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ S + KL + P + + DT+ ++ V Sbjct 264 ATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVV------------------- 303 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 PG LK Y + + E IIF RTK + + L Sbjct 304 ---------PGG------------LKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLC- 341 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +FS LHGD ++R +L+ FK G L+ TDVAARG+DI V V Sbjct 342 --------NLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIV 393 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 +N +P + ++Y+HR+GR RA R G +ISLV+ Sbjct 394 VNYDIPVDSKSYIHRVGRTARAGRSGKSISLVS 426 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 27/59 (46%), Positives = 45/59 (76%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FSE+ ++PE+ QA + +++ PT IQ+++IP L G D++ A+TGSGKT AF+IP++ Sbjct 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPIL 140 >sp|P47943|IF4A_SCHPO ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tif1 PE=1 SV=2 Length=392 Score = 123 bits (308), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 104/358 (29%), Positives = 164/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA+Q + ++ + IGG RD ++ L+ GV +VVGTP Sbjct 89 QALILAPTRELAQQIQKVVVALGDLMN---VECHACIGGTLVRDDMAALQAGVHVVVGTP 145 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L V+ VLDEAD +LS+G+ D I + +P QV++ S Sbjct 146 GRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTA------QVVLLS 199 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ DV +++ K M P + +K ++ + + V V Sbjct 200 ATMPQ-DVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEK----------------- 241 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W + L Y + QA+IFC T+ D L + Sbjct 242 ---------------EEWK--LDTLCDLYETVTVT-----QAVIFCNTRRKVDWLTEQLT 279 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 ++ F+ +HGD +R + F+ G R LI TD+ ARGID+ V V Sbjct 280 ERD---------FTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLV 330 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP ++NY+HRIGR GR R G++I+ V + ++ + + YNT ++E Sbjct 331 INYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREI-----EQFYNTHIEE 383 Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 27/70 (39%), Positives = 41/70 (59%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + PE+ + + + P+ IQ +I ILG DVL A++G+GKT FSI V+Q Sbjct 20 TFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQ 79 Query 63 IVYETLKDQQ 72 + +LK Q Sbjct 80 KIDTSLKQCQ 89 >sp|Q9DF35|DD21A_XENLA Nucleolar RNA helicase 2-A OS=Xenopus laevis OX=8355 GN=ddx21-a PE=2 SV=2 Length=759 Score = 127 bits (318), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 102/337 (30%), Positives = 161/337 (48%), Gaps = 59/337 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ +I+ P+RELA Q N I+ K KL+ GG + Q+ +++G+D +VG Sbjct 253 APRVIILTPTRELAIQITNEIRSITK-----KLKVSCFYGGTPYQQQVFAIKDGIDFLVG 307 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ DLV +L+L+ ++ +VLDE D + G+S+ + + + + + Q ++ Sbjct 308 TPGRVRDLVQNYRLDLTTLKHVVLDEVDMMFDMGFSEQVEEILS-VRYKADPEENPQTLL 366 Query 406 CSATLHSFDVKKLSEKIM--HFPTWVDLKGEDS--VPDTVHHVVVPVNPKTDRLWERLGK 461 SAT + + +++K M F +DL G S TV H+ + R K Sbjct 367 FSATCPDW-MYNMAKKYMRKQFEK-IDLIGHRSQKAATTVEHLAIECT--------RSQK 416 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + + D +++ G + + IIFC +K Sbjct 417 AAVLGD--------------------LVQVYSGSHG----------KTIIFCDSK----- 441 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 LE + + G K+ S LHGD + ER+ L+ F++G LI T+VAARG+DI Sbjct 442 LEAHTLATSCGSLKQ----SAKSLHGDLQQKEREVVLKGFRQGTFEVLIATNVAARGLDI 497 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V V+ + P E YVHR GR GRA R G+ ISL Sbjct 498 PEVDLVVLYSAPKEADAYVHRSGRTGRAGRTGVCISL 534 Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/59 (36%), Positives = 37/59 (63%), Gaps = 5/59 (8%) Query 20 MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGK 78 + +L P IQ+++ G DV++ A TG+GKT +F+IP+++ + E DQQ +G+ Sbjct 199 VSYLFP--IQSKTFHTAYSGKDVVVQARTGTGKTFSFAIPLVEKLNE---DQQPLARGR 252 >sp|Q5B3H7|DBP8_EMENI ATP-dependent RNA helicase dbp8 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp8 PE=3 SV=1 Length=525 Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 107/342 (31%), Positives = 152/342 (44%), Gaps = 64/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLENGVDIVVGTP 347 A+I+ P+RELA Q IK I P+ ++ +LI GG R Q L +VV TP Sbjct 166 AVILTPTRELALQIFEQIK----AISAPQSMKPVLITGGTDMRSQAIELAGRPHVVVATP 221 Query 348 GRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 GRL D ++T + L +VR +VLDEAD LLS G + + + + +R Q Sbjct 222 GRLADHINTSGTDTVAGLKRVRMVVLDEADRLLSPGPGSMLPDVETCLSFLPGPSQR-QT 280 Query 404 IVCSATLHSFDVKKLSE------KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 ++ +ATL + +V+ L K F T + + +D+VP T+ V V L Sbjct 281 LLFTATL-TPEVRALKSMPQTPGKPPIFVTEISTEAKDTVPPTLRTTYVQVP-----LTH 334 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 R H+ + S I K AI+F T Sbjct 335 REAFLHV-------------------LLSTESNITKS--------------AIVFTNTTK 361 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D LE+ GH+ + LH ER NL RF+ R L+ TDVA+R Sbjct 362 SADLLERLL-------RSLGHRVTS--LHSLLPQSERNSNLARFRASAARVLVATDVASR 412 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 G+DI V V+N +P +YVHR+GR RA R G A++LV Sbjct 413 GLDIPSVSLVVNFEVPRNPDDYVHRVGRTARAGRTGEAVTLV 454 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/60 (42%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + V P + ++ M PT IQ IP IL G D + + TGSGKT AFS+P++Q Sbjct 96 SFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPILQ 155 >sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens OX=9606 GN=DDX23 PE=1 SV=3 Length=820 Score = 127 bits (318), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 105/357 (29%), Positives = 158/357 (44%), Gaps = 59/357 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA+Q +F K + +R + +IGG++ DQ L G +IV+ T Sbjct 469 PYAIILAPTRELAQQIEEETIKFGKPLG---IRTVAVIGGISREDQGFRLRMGCEIVIAT 525 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ L LS+ ++VLDEAD ++ G+ + ++ +P + Sbjct 526 PGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDP 585 Query 407 SATLHSFDV--KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 L +F+ K + +M T +P V ERL +S++ Sbjct 586 EKMLANFESGKHKYRQTVMFTAT---------MPPAV---------------ERLARSYL 621 Query 465 RTDDVHAKDNTRPG------ANSPEMWSEAIKILKGEYAVR----AIKEHKMDQAII-FC 513 R RP A P E L E R AI E D II F Sbjct 622 R----------RPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFV 671 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 K CD L + + G ++ LHG + +R+ L K G L+ TD Sbjct 672 NQKKGCDVLAKSLEKMG---------YNACTLHGGKGQEQREFALSNLKAGAKDILVATD 722 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VA RGIDI V V+N + ++Y+HRIGR GRA + G+AI+ + E V+Y + Sbjct 723 VAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYEL 779 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + + P I + +++ + PT IQ ++IP+ L D++ AETGSGKT AF IP+ Sbjct 390 IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPL 449 Query 61 I 61 + Sbjct 450 L 450 >sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0308500 PE=2 SV=1 Length=770 Score = 126 bits (317), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 99/339 (29%), Positives = 152/339 (45%), Gaps = 59/339 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ++ P+RELA Q K+F K + LR + GGV+ DQ L+ G +IV+ T Sbjct 293 PIGVVCAPTRELAHQIYLEAKKFAKPYN---LRVAAVYGGVSKFDQFKELKAGCEIVIAT 349 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ L + + +LVLDEAD + G+ I + QI Q ++ Sbjct 350 PGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQI------RPDRQTLLF 403 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + V++L+ +I+ P V + S + + VV + +++ L K Sbjct 404 SATM-PYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMI 462 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 DD ++F K D +E Sbjct 463 DD--------------------------------------GDVLVFAAKKARVDEIESQL 484 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 Q+G F LHGD+ R + L++FK G L+ TDVAARG+DI + Sbjct 485 NQRG---------FRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAARGLDIKSIKT 535 Query 587 VINVTLPDEKQNYVHRIGRVGRA-ERMGLAISLVATEKE 624 V+N + E ++HRIGR GRA ++ G A +L+ T+KE Sbjct 536 VVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLI-TQKE 573 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/76 (33%), Positives = 49/76 (64%), Gaps = 1/76 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP-VI 61 +F++ G ++ A+ + + PT IQ +++P++L G D++ A+TGSGKT AF +P ++ Sbjct 220 SFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIV 279 Query 62 QIVYETLKDQQEGKKG 77 I+ + +++EG G Sbjct 280 HIMDQPELEKEEGPIG 295 >sp|Q6C7X8|DBP10_YARLI ATP-dependent RNA helicase DBP10 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP10 PE=3 SV=1 Length=926 Score = 127 bits (318), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 101/357 (28%), Positives = 160/357 (45%), Gaps = 59/357 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QTL +K F D LR +++GG + +Q ++ + DI++ TP Sbjct 174 RAVILSPSRELALQTLKVVKDFSAGTD---LRLAMLVGGDSLEEQFKMMMSNPDIIIATP 230 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L +L+L+ V ++ DEAD L G+ + +N + +P Q ++ S Sbjct 231 GRFLHLKVEMELSLASVEYICFDEADRLFELGFGEQMNELLASLPS------NRQTLLFS 284 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV------------------- 448 ATL V + ++ +H P V L E +P+ + V Sbjct 285 ATLPKTLV-EFAKAGLHDPILVRLDAETKLPEHLEMTFFAVKENQRDACLAFILKEVIQM 343 Query 449 ---NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P+ + ERL + I D +D R P+ E R H+ Sbjct 344 PFATPEQLKELERLDERAI---DDGERDEDR-KQKRPKFKKE-----------RLPPAHQ 388 Query 506 M---DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + I+FC TK + + +Q G ++ ++G H RK L RF+ Sbjct 389 LPSEKSTIVFCPTKHHVEYV-IVLLQTLG--------YAVSYIYGTLDQHARKNQLYRFR 439 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 G L+ TDVAARGID+ + VIN +LP + ++HR+GR RA G A S++ Sbjct 440 TGKTSILVVTDVAARGIDVPVLANVINYSLPPSPKVFIHRVGRTARAGNRGWAYSII 496 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ +G+ + + + + PT IQ ++IPL+L G DV+ A TGSGKT AF +P+++ Sbjct 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162 >sp|Q4I7F9|PRP28_GIBZE Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=PRP28 PE=3 SV=1 Length=721 Score = 126 bits (316), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 93/352 (26%), Positives = 163/352 (46%), Gaps = 44/352 (13%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P ALI+ P+REL +Q ++F + R + I+GG +Q L +G +IVV Sbjct 363 DGPYALIMAPTRELVQQIETEARKFAGPLG---FRVVSIVGGHQIEEQAYNLRDGAEIVV 419 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P VT++ Sbjct 420 ATPGRLLDCIERRLLVLSQCCYVIMDEADRMIDLGFEESVNKILDALP-VTNEKPDTDEA 478 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + + + L G D T+ + + P L ER+ K ++ Sbjct 479 ENAQIMQRY-----------------LGGRDRYRQTMMYTAT-MPP----LVERIAKKYL 516 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA------IIFCRTKID 518 R + N ++ E + ++ + GE + + + I+F K + Sbjct 517 RRPAIVTIGNAGEAVDTVE---QRVEFVSGEDRRKKRLQEILSSGNFGPPIIVFVNIKRN 573 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 CD + + Q G +S V LHG + +R+ L + G + L+ TD+A RG Sbjct 574 CDAVARDIKQMG---------WSAVTLHGSKTQEQREAALGSVRAGHTQVLVATDLAGRG 624 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 ID+ V V+N + ++Y HRIGR GRA + G+AI+ + E + Y + Sbjct 625 IDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGPEDHETMYDL 676 Score = 41.6 bits (96), Expect = 0.029, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E + + V+++ + P+ IQ +IP+ L D++ A TGSGKT AF +P+ Sbjct 287 MRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPL 346 Query 61 I 61 + Sbjct 347 L 347 >sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens OX=9606 GN=DDX21 PE=1 SV=5 Length=783 Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/340 (29%), Positives = 157/340 (46%), Gaps = 54/340 (16%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ L++ P+RELA Q + K KL GG Q + NG+DI+VG Sbjct 260 APQVLVLAPTRELANQVSKDFSDITK-----KLSVACFYGGTPYGGQFERMRNGIDILVG 314 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + GKL+L++++ +VLDE D +L G++D + + + + S+ Q ++ Sbjct 315 TPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSE-DNPQTLL 373 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT P WV + + T V D + ++ K+ I Sbjct 374 FSATC---------------PHWVFNVAKKYMKSTYEQV--------DLIGKKTQKTAIT 410 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ- 524 + + K + W++ ++ +R H+ + IIFC TK + L Q Sbjct 411 VEHLAIKCH----------WTQRAAVIGD--VIRVYSGHQ-GRTIIFCETKKEAQELSQN 457 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 I+Q LHGD +R+ L+ F+ G L+ T+VAARG+DI V Sbjct 458 SAIKQ-----------DAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEV 506 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VI + P + ++Y+HR GR GRA R G+ I ++E Sbjct 507 DLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEE 546 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 AFS + E + ++ + +L P IQA++ + G D++ A TG+GKT +F+IP+ Sbjct 187 AFSNFPISEETIKLLKGRGVTFLFP--IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPL 244 Query 61 IQIVYETLKDQQEGK 75 I+ ++ L+D++ G+ Sbjct 245 IEKLHGELQDRKRGR 259 >sp|Q4E162|IF4A_TRYCC Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi (strain CL Brener) OX=353153 GN=Tc00.1047053511585.190 PE=3 SV=1 Length=404 Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 110/378 (29%), Positives = 170/378 (45%), Gaps = 88/378 (23%) Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYID--NPKLRELLIIGGVAARDQLSVLENG 339 F N + L++ P+RELA QT I + +++ N + GG +D L+ G Sbjct 90 FRHNVLQGLVLSPTRELALQTAEVITRIGEFLAEGNSSFCATFV-GGTRVQDDYRKLQAG 148 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 + VGTPGR+ D+ G + +R LVLDEAD +LSQG+++ I + +P K Sbjct 149 SIVAVGTPGRVVDVTKRGAMRTEHLRVLVLDEADEMLSQGFAEQIYEIFRYLP------K 202 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 +QV + SAT+ DV +L++K M Sbjct 203 EIQVALFSATMPD-DVLELTKKFM------------------------------------ 225 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD------------ 507 +D TR + E IK +Y + +EHK+D Sbjct 226 ------------RDPTRILVKRESLTLEGIK----QYFIAVEEEHKLDTLMDLYETVSIA 269 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 Q++IF T+ D L Q ++ H SC +H + +R++ + F+ G R Sbjct 270 QSVIFANTRRKVDWLAQQL-------NQSNHTVSC--MHSEMPKQDREKVMSTFRNGSSR 320 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TD+ ARGID+H V VIN LP K++Y+HRIGR GR R G+AI+ V + +V Sbjct 321 VLVTTDLVARGIDVHHVNIVINFDLPTNKESYLHRIGRGGRYGRKGVAINFVTQKDVEVL 380 Query 628 YHVCSSRGKGCYNTRLKE 645 + S Y+T++ E Sbjct 381 REIESH-----YHTQIDE 393 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQ 62 +Q Sbjct 85 LQ 86 >sp|A5AA68|DBP8_ASPNC ATP-dependent RNA helicase dbp8 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp8 PE=3 SV=1 Length=522 Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 104/341 (30%), Positives = 153/341 (45%), Gaps = 64/341 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 L++ P+RELA Q IK I P+ ++ LLI GG R Q L +V+ TPG Sbjct 164 LVLTPTRELALQIYEQIK----AISAPQSMKPLLITGGTDMRPQAVALAQRPHVVIATPG 219 Query 349 RLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 RL D ++T + L +VR +VLDEAD LL+ G+ + + + + +R Q + Sbjct 220 RLADHINTSGSDTIRGLKRVRMVVLDEADRLLAPGHGSMLPDVETCLSALPPSSER-QTL 278 Query 405 VCSATLHSFDVKKL------SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + +ATL + +V+ L S K F T + + S+P T+ + V P T R Sbjct 279 LFTATL-TPEVRALKSMPRPSTKPPIFVTEISTENNASIPPTLKQTYLKV-PMTHR---- 332 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 +H +T A+ P AIIFC Sbjct 333 -------EAFLHVLLSTEANASKP--------------------------AIIFCNHTKT 359 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D LE+ + H+ + LH ER NL RF+ R L+ TDVA+RG Sbjct 360 ADLLERML-------RRLSHRVTS--LHSLLPQSERNANLARFRASAARLLVATDVASRG 410 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +DI V V+N +P +YVHR+GR RA R G +++LV Sbjct 411 LDIPSVELVVNFDVPRNPDDYVHRVGRTARAGRKGESVTLV 451 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/60 (42%), Positives = 36/60 (60%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AFS+P++Q Sbjct 93 SFASLNVAPWLIGSLTTMAVRKPTAIQKACIPEILNGRDCIGGSRTGSGKTIAFSVPMLQ 152 >sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana OX=3702 GN=RH8 PE=2 SV=1 Length=505 Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 156/346 (45%), Gaps = 60/346 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +A+I+ P+RELA QT K+ K++ K++ ++ GG + +D + L V ++V Sbjct 198 NVIQAVIIVPTRELALQTSQVCKELGKHL---KIQVMVTTGGTSLKDDIMRLYQPVHLLV 254 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL G L LV+DEAD LLSQ + + + + +P+ Q++ Sbjct 255 GTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESR------QIL 308 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK ++ + P ++L Sbjct 309 MFSATF-PVTVKDFKDRFLTNPYVINL--------------------------------- 334 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 D++ K T+ A E + I L ++ + +++Q+IIFC + + L + Sbjct 335 -MDELTLKGITQFYAFVEE--RQKIHCLNTLFS-----KLQINQSIIFCNSVNRVELLAK 386 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G +SC +H R + F+ G R L+CTD+ RGIDI V Sbjct 387 KITELG---------YSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 437 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VIN P + Y+HR+GR GR +GLA++L+ E Y + Sbjct 438 NVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 483 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IPV++ Sbjct 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLE 191 >sp|Q553B1|DDX46_DICDI ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum OX=44689 GN=helB1 PE=2 SV=1 Length=1151 Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 102/342 (30%), Positives = 152/342 (44%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q K+F K + LR + GG + +Q++ L+ G DIVV TPG Sbjct 585 ALIMSPTRELALQIHVECKKFSKVLG---LRTACVYGGASISEQIAELKRGADIVVCTPG 641 Query 349 RLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 R+ D++ NL +V FLVLDEAD + G+ IN + V S Q I+ Sbjct 642 RMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCI------VDSIRPDRQTIM 695 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV--VVPVNPKTDRLWERLGKSH 463 SAT V+ +++KI++ P + G V + V P + RL E L Sbjct 696 FSATFPP-KVENVAKKILNKPLEIIAGGRSIVSSDIEQFVEVRPTETRFRRLIELLS--- 751 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +W HK Q +IF + DNL Sbjct 752 --------------------IWY-----------------HK-GQILIFTNRQETTDNLY 773 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q+ C+ LHG + +R + + FK LI T +A+RG+DI Sbjct 774 RQL---------SNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGLDIKD 824 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + V+N PD ++YVHR+GR GRA G A + + ++E+ Sbjct 825 LNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEER 866 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/62 (34%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++++ G+ ++ +++ + PT IQA++IP I+ G D++ A TGSGKT AF +P+ Sbjct 508 IQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPM 567 Query 61 IQ 62 + Sbjct 568 FR 569 >sp|Q0U7S9|DHH1_PHANO ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DHH1 PE=3 SV=1 Length=522 Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 105/380 (28%), Positives = 165/380 (43%), Gaps = 75/380 (20%) Query 258 LSKAPDG------YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 L++A +G +++ + N ++++T+ ALI+ P+RELA QT K K Sbjct 90 LARAKNGTGKTAAFVIPTLERVNPKISKTQ-------ALILVPTRELALQTSQVCKTLGK 142 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 ++ + ++ GG +D + L + V I+VGTPGR+ DL G +LS + V+DE Sbjct 143 HLG---INVMVSTGGTGLKDDIIRLSDPVHIIVGTPGRILDLAGKGVADLSTCQTFVMDE 199 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD LLS ++ + ++ P K QV++ SAT VK +K M+ P ++L Sbjct 200 ADKLLSPEFTPVVEQLLGFHP------KDRQVMLFSATF-PIVVKTFKDKHMNSPYEINL 252 Query 432 KGEDSVPD-TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 E ++ T ++ V K L K I Sbjct 253 MDELTLRGITQYYAFVEEKQKVHCLNTLFNKLQI-------------------------- 286 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 +Q+IIFC + + L + + G +SC H Sbjct 287 ----------------NQSIIFCNSTNRVELLAKKITELG---------YSCFYSHARML 321 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 H R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR Sbjct 322 QHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFG 381 Query 611 RMGLAISLVATEKEKVWYHV 630 +GLAI+L+ E Y + Sbjct 382 HLGLAINLINWEDRFNLYRI 401 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/69 (35%), Positives = 38/69 (55%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 51 FEDFFIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 110 Query 64 VYETLKDQQ 72 V + Q Sbjct 111 VNPKISKTQ 119 >sp|Q2H0R2|DBP10_CHAGB ATP-dependent RNA helicase DBP10 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP10 PE=3 SV=1 Length=762 Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 157/334 (47%), Gaps = 27/334 (8%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QTL +K+ K D L+ +L++GG + +Q ++ DI++ TP Sbjct 158 RAIIMSPSRELALQTLKVVKELGKGTD---LKTVLLVGGDSLEEQFGLMAANPDIIIATP 214 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L LNLS VR++V DEAD L G++ + + + +P Q ++ S Sbjct 215 GRFLHLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEILHALPPSR------QTLLFS 268 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS-HIRT 466 ATL S V+ + + P+ + L E V + V + E+ G HI Sbjct 269 ATLPSSLVE-FARAGLQEPSLIRLDAETKVSPDLESAFFSV-----KGGEKEGALLHILH 322 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA-IIFCRTKIDCDNLEQY 525 D + P E + + K + R KE + + IIF TK + + Sbjct 323 DVIKMPLGV-PEGIEEETDEQQARKRKRDSERRNRKEKPTEHSTIIFTATKHHVEYIAHL 381 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 G FS ++G RK ++ F++G L+ TDVAARGIDI + Sbjct 382 LRHAG---------FSVSYIYGSLDQTARKIQVDNFRRGRTNILVVTDVAARGIDIPVLA 432 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN P + + +VHR+GR RA + G A +L+ Sbjct 433 NVINYDFPPQPKIFVHRVGRTARAGQRGWAYALL 466 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IPL+L DV+ A TGSGKT AF IP+I+ Sbjct 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIE 146 >sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=PRP28 PE=3 SV=2 Length=580 Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/345 (29%), Positives = 158/345 (46%), Gaps = 49/345 (14%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P LI+ P+RELA Q K+ K + D L + IIGG + + + NGV IVV Sbjct 236 NKPLGLILAPTRELALQI---TKEAKLFGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVV 292 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP-----QVTSDGK 399 TPGRL D + G +NLS F +DEAD ++ G+ + + N +P + T DGK Sbjct 293 ATPGRLIDSLERGIINLSNCYFFTMDEADKMIDMGFEKSLQSILNYLPASEKLETTIDGK 352 Query 400 RLQV-----IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 + ++ +AT+ S ++K+++ + P ++ + V V +N + + Sbjct 353 IFNIKKRITLMFTATI-SPPIEKITKNYLMKPGYLFIGN-------VGEAVDNINQQFEY 404 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 R I P+ + IL+ E++ IIF Sbjct 405 FGARQSSDEIL---------------DPKKLDKLFSILRFHK-----DENRNYSIIIFAN 444 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 K C+ L Y + + G D +HG + R++ ++ F++G + LI TDV Sbjct 445 FKKACEEL-AYELSRKGFSDN-------TVIHGSKSQEARERAIDSFREGKDKILIATDV 496 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 AARGIDI V V+N + + Y+HRIGR GRA G + + + Sbjct 497 AARGIDIPNVSLVVNYQMTKKFDEYIHRIGRTGRAGNKGTSCTFI 541 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 6/60 (10%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV------YETLKDQQEGKKGK 78 PT IQ SIPL L G D++ AETGSGKT AF +P+ + Y + QQE K Sbjct 178 PTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLPLFSYILSVDSNYLLYEHQQESNFNK 237 >sp|Q8NJM2|DBP10_ASPFU ATP-dependent RNA helicase dbp10 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp10 PE=3 SV=1 Length=869 Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 103/353 (29%), Positives = 160/353 (45%), Gaps = 57/353 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L++ PSRELA QTL +K+ + D L+ +L++GG + +Q +++ DI++ TP Sbjct 142 RGLVLSPSRELALQTLKVVKELGRGTD---LKSVLLVGGDSLEEQFAMIAGNPDIIIATP 198 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS +R++V DEAD L G++ + + + +P Q ++ S Sbjct 199 GRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPA------NRQTLLFS 252 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PD-------------------TVHHVV-V 446 ATL V+ + + PT V L E + PD +H V+ + Sbjct 253 ATLPKSLVE-FARAGLQEPTLVRLDTESKISPDLQNAFFSVKSSEKEGALLYILHEVIKM 311 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 P P T+ +R + +D AK+ EM E AV + Sbjct 312 PTGP-TEVSQQR------KEEDASAKNLKNKKRKRAEM----------EKAVNTRESPTK 354 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 I+F TK D L + G F+ ++G RK ++ F+ G Sbjct 355 HSTIVFAATKHHVDYLYSLLCEAG---------FAVSYVYGSLDQTARKIQVQNFRTGMT 405 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 L+ TDVAARGIDI + VIN P + + +VHR+GR RA R G + SLV Sbjct 406 NILVVTDVAARGIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLV 458 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 72 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIE 130 >sp|Q39189|RH7_ARATH DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana OX=3702 GN=RH7 PE=1 SV=2 Length=671 Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 102/364 (28%), Positives = 164/364 (45%), Gaps = 63/364 (17%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 I++S +G A+ + +P L++ P+RELA+Q + F Y + L + G Sbjct 154 ILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAAD---FDAYGGSLGLSSCCLYG 210 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + Q L+ GVDIVVGTPGR+ D + L+ S ++F VLDEAD +L G+ + + Sbjct 211 GDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVE 270 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVDLKGEDSV--PDTVH 442 + ++ D ++Q ++ SATL S+ VK +S + + +DL G D + ++V Sbjct 271 LILGKV----EDSTKVQTLLFSATLPSW-VKNISNRFLKRDQKTIDLVGNDKMKASNSVR 325 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 H+ +P N + + + D + + Sbjct 326 HIAIPCN--------KAAMARLIPDIISCYSSG--------------------------- 350 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 Q IIF TK+ L G LHG+ +R+ L F+ Sbjct 351 ----GQTIIFAETKVQVSEL-------------SGLLDGSRALHGEIPQSQREVTLAGFR 393 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G L+ T+VAARG+DI+ V +I P E + Y+HR GR GRA G+A++L + Sbjct 394 NGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSR 453 Query 623 KEKV 626 K V Sbjct 454 KSSV 457 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/43 (40%), Positives = 28/43 (65%), Gaps = 2/43 (5%) Query 20 MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 ++ L P IQA + ++L G D++ A TG GKT AF +P+++ Sbjct 116 IEALFP--IQASTFDMVLDGADLVGRARTGQGKTLAFVLPILE 156 >sp|Q5U526|I4A3A_XENLA Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis OX=8355 GN=eif4a3-a PE=2 SV=1 Length=415 Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/358 (28%), Positives = 164/358 (46%), Gaps = 63/358 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q + Y++ ++ IGG + + L+ G +V GTP Sbjct 112 QALILAPTRELAGQIQKVLLALGDYMN---VQCHACIGGTNVGEDIRKLDYGQHVVAGTP 168 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ LVLDEAD +L++G+ + I ++ +P T QV + S Sbjct 169 GRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPAT------QVCLIS 222 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL ++ +++ K M P + +K ++ + + V V ER Sbjct 223 ATL-PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAV--------ER--------- 264 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W L Y I QA+IFC TK D L + Sbjct 265 ---------------EEWK--FDTLCDLYDTLTIT-----QAVIFCNTKRKVDWLTEKM- 301 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F+ +HGD ER+ ++ F+ G R LI TDV ARG+D+ V + Sbjct 302 --------REANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLI 353 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 IN LP+ ++ Y+HRIGR GR G+AI+ V + ++ + + Y+T++ E Sbjct 354 INYDLPNNRELYIHRIGRSGRYGGKGVAINFVKNDDIRILRDI-----EQYYSTQIDE 406 Score = 40.8 bits (94), Expect = 0.040, Method: Compositional matrix adjust. Identities = 19/70 (27%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT F + V+Q Sbjct 43 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 102 Query 63 IVYETLKDQQ 72 + +++ Q Sbjct 103 CLDIQVRETQ 112 >sp|Q0IHV9|DDX6_XENTR Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropicalis OX=8364 GN=ddx6 PE=2 SV=1 Length=481 Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/333 (29%), Positives = 151/333 (45%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+++ P+RELA Q Q K++ K+ + GG RD + L++ V +V+ TP Sbjct 165 QAMVIVPTRELALQVSQICIQVSKHMGGVKV--MATTGGTNLRDDIMRLDDTVHVVIATP 222 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ G + ++ +VLDEAD LLSQ DF+ M + I + K Q+++ S Sbjct 223 GRILDLIKKGVAKVDHIQMIVLDEADKLLSQ---DFVQIMEDIIITLP---KNRQILLYS 276 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+K + P ++L E ++ + + ER Sbjct 277 ATF-PLSVQKFMTSHLQKPYEINLMEELTLKGVTQYYAY--------VTER--------Q 319 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 VH + ++S +++Q+IIFC + + L + Sbjct 320 KVHCLNT---------LFSRL----------------QINQSIIFCNSSQRVELLAKKIS 354 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q G +SC +H + R + F+ G R L+CTD+ RGIDI V V Sbjct 355 QLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVV 405 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN P + Y+HRIGR GR +GLAI+L+ Sbjct 406 INFDFPKLAETYLHRIGRSGRFGHLGLAINLIT 438 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 97 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE 155 >sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp10 PE=3 SV=1 Length=929 Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/335 (30%), Positives = 154/335 (46%), Gaps = 22/335 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ PSRELA QTL +K+ K D L+ +L++GG + +Q S++ DIV+ TP Sbjct 161 RGLILSPSRELALQTLKVVKELGKGTD---LKSVLLVGGDSLEEQFSLMAGNPDIVIATP 217 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS +R++V DEAD L G++D + + +P Q ++ S Sbjct 218 GRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGFADQLTEILYGLP------ANRQTLLFS 271 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV--NPKTDRLWERLGKS-HI 464 ATL V + + + PT + L E + + +V V + K L L + + Sbjct 272 ATLPKSLV-EFARAGLQEPTLIRLDTESKISPDLENVFFSVKSSEKEGALLHILHEVIKM 330 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T A + + + + + A+ + I+F TK D L Sbjct 331 PTGPTEAAQRQKEQGDGKNFKNFKKRKRGDDKAINFQESPTKYSTIVFAATKHHVDYLYS 390 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G F+ +G RK ++ F+ G L+ TDVAARGIDI + Sbjct 391 LLREAG---------FAVSYAYGSLDQTARKIQVQNFRAGLSNILVVTDVAARGIDIPIL 441 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN P + + +VHR+GR RA R G + SLV Sbjct 442 ANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLV 476 Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IP+I+ G DV+ A TGSGKT AF IP+I+ Sbjct 91 FQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAFVIPMIE 149 >sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=RRP3 PE=3 SV=1 Length=501 Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 146/333 (44%), Gaps = 59/333 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A I+ P+RELA+Q + +R I+GG+ DQ L I++ TPG Sbjct 152 ACILAPTRELAQQIKETFDSLGSLMG---VRSTCIVGGMNMMDQARDLMRKPHIIIATPG 208 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T +L +++FLV+DEAD LL + ++R+ IP + + S Sbjct 209 RLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPT-----QERTTYLFS 263 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ S + KL + P + + DT+ ++ V Sbjct 264 ATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVV------------------- 303 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 PG LK Y + + E IIF RTK + + L Sbjct 304 ---------PGG------------LKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLC- 341 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +FS LHGD ++R L+ FK G L+ TDVAARG+DI V V Sbjct 342 --------NLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIV 393 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 +N +P + ++Y+HR+GR RA R G +ISLV+ Sbjct 394 VNYDIPVDSKSYIHRVGRTARAGRSGKSISLVS 426 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 27/59 (46%), Positives = 45/59 (76%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FSE+ ++PE+ QA + +++ PT IQ+++IP L G D++ A+TGSGKT AF+IP++ Sbjct 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPIL 140 >sp|Q5BFU7|DBP10_EMENI ATP-dependent RNA helicase dbp10 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp10 PE=3 SV=1 Length=936 Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 104/348 (30%), Positives = 161/348 (46%), Gaps = 36/348 (10%) Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 TKF + LI+ PSRELA QTL +K+ K D L+ +L++GG + +Q ++ Sbjct 158 TKF---GARGLILSPSRELALQTLKVVKELGKGTD---LKSVLLVGGDSLEEQFGMMAGN 211 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 DIV+ TPGR L L+LS ++++V DEAD L G++ + + + +P Sbjct 212 PDIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPSTR---- 267 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q ++ SATL V+ + + PT V L E + + + V + E+ Sbjct 268 --QTLLFSATLPKSLVE-FARAGLQDPTLVRLDTESKISPDLQNAFFSV-----KSAEKE 319 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD--------QAII 511 G ++V K T P S + + + K + RA E ++ I+ Sbjct 320 GALLYILNEV-IKMPTGPTEASLRLKEKGPEDSKNKKRKRAEMERAVNMKESPTKHSTIV 378 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F TK D L + G F+ ++G RK ++ F+ G L+ Sbjct 379 FAATKHHVDYLYSLLREAG---------FAVSYVYGSLDQTARKIQVQNFRTGISNILVV 429 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 TDVAARGIDI + VIN P + + +VHR+GR RA R G + SLV Sbjct 430 TDVAARGIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLV 477 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIE 151 >sp|P44922|RHLB_HAEIN ATP-dependent RNA helicase RhlB OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rhlB PE=3 SV=2 Length=415 Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 104/336 (31%), Positives = 164/336 (49%), Gaps = 57/336 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ALI+ P+RELA Q N+ + K L+ L GG QL +E GVDI++GT Sbjct 84 PRALILAPTRELAVQISNDAEFLAK---ASGLKTALAYGGDGYDKQLQAIERGVDILIGT 140 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D V G + L +++ +VLDEAD + G FI + + + + RL ++ Sbjct 141 TGRVIDYVKQGVIGLDEIQVVVLDEADRMFDLG---FIRDIRYLLRKCPAPQARLTMLF- 196 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M+ P +++++ E T H + Sbjct 197 SATL-SYKVRELAFEDMNEPEYIEIEPEQK---TGHRI---------------------- 230 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K+ +N +M + + +++ E+ R I +F TK C+ + Y Sbjct 231 -----KEELFYPSNQDKM-ALLLTLMEDEWPERCI---------VFANTKHRCEEIWGYL 275 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 GH+ L GD +R L++F GD+ L+ TDVAARG+ I V + Sbjct 276 A-------ADGHRVG--LLTGDVAQKKRLSLLKQFTDGDLDILVATDVAARGLHISDVTH 326 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V N LPD++++YVHRIGR GRA G++IS E Sbjct 327 VFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEE 362 Score = 39.7 bits (91), Expect = 0.094, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 32/53 (60%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 FS + + P + A+ + + T IQA S+P+ L G DV A+TG+GKT AF Sbjct 11 FSALPLHPIVRGALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKTMAF 63 >sp|P21507|SRMB_ECOLI ATP-dependent RNA helicase SrmB OS=Escherichia coli (strain K12) OX=83333 GN=srmB PE=1 SV=1 Length=444 Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 147/333 (44%), Gaps = 57/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ LI+ P+RELA Q ++ ++ K+ L I GGVA + V DIVV T Sbjct 77 PRILILTPTRELAMQVSDHARELAKHT---HLDIATITGGVAYMNHAEVFSENQDIVVAT 133 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GRL + + V L+LDEAD +L G++ I + + R Q ++ Sbjct 134 TGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW------RKQTLLF 187 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL ++ +E+++ P V V NP T R +++ + + R Sbjct 188 SATLEGDAIQDFAERLLEDP-----------------VEVSANPST-RERKKIHQWYYRA 229 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 DD+ K V +K+ + ++I+F R + L + Sbjct 230 DDLEHKT---------------------ALLVHLLKQPEATRSIVFVRKRERVHELANWL 268 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G + L G+ +R + ++R +G V L+ TDVAARGIDI V + Sbjct 269 REAG---------INNCYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSH 319 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V N +P Y+HRIGR RA R G AISLV Sbjct 320 VFNFDMPRSGDTYLHRIGRTARAGRKGTAISLV 352 Score = 34.7 bits (78), Expect = 3.7, Method: Compositional matrix adjust. Identities = 22/47 (47%), Positives = 32/47 (68%), Gaps = 0/47 (0%) Query 16 AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 A+++ + PT IQA +IP L G DVL +A TG+GKT A+ +P +Q Sbjct 18 ALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64 >sp|Q61496|DDX4_MOUSE ATP-dependent RNA helicase DDX4 OS=Mus musculus OX=10090 GN=Ddx4 PE=1 SV=2 Length=702 Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/349 (28%), Positives = 160/349 (46%), Gaps = 55/349 (16%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 +T ++F P+ +IV P+REL Q + +K+ +R ++I GG + Sbjct 328 ITASRFKELQEPECIIVAPTRELINQIY---LEARKFSFGTCVRAVVIYGGTQFGHSVRQ 384 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 + G +I+ TPGRL D++ K+ L QV++LVLDEAD +L G+ + ++ + P + Sbjct 385 IVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLIS-CPGMP 443 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 S +R Q ++ SAT ++++L+ + K+ L Sbjct 444 SKEQR-QTLLFSATFPE-EIQRLAGDFL---------------------------KSSYL 474 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + +G+ DV + + + K E V ++ ++ ++F T Sbjct 475 FVAVGQVGGACRDVQ------------QTILQVGQYSKREKLVEILRNIGDERTMVFVET 522 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K D + + Q+ + S +HGDR+ ER+Q L F+ G L+ T VA Sbjct 523 KKKADFIATFLCQE---------KISTTSIHGDREQREREQALGDFRCGKCPVLVATSVA 573 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ARG+DI V +VIN LP YVHRIGR GR G AIS T+ + Sbjct 574 ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTDSD 622 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 35/61 (57%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + + + T +Q SIP++L G D++ A+TGSGKT AF +P+ Sbjct 260 ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPI 319 Query 61 I 61 + Sbjct 320 L 320 >sp|Q4P331|IF4A_USTMA ATP-dependent RNA helicase eIF4A OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=TIF1 PE=3 SV=1 Length=411 Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/360 (29%), Positives = 167/360 (46%), Gaps = 63/360 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +ALI+ P+RELA+Q + Y+ K+ IGG R+ ++ L G +VVG Sbjct 106 AVQALILAPTRELAQQIQKVVIALGDYM---KIDCHACIGGTNVREDMAKLNEGAQVVVG 162 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D+++ Q++ LDEAD +LS+G+ D + + +PQ T Q ++ Sbjct 163 TPGRVYDMINRRAFKTDQLKMFCLDEADEMLSRGFKDQMYEVFQLLPQDT------QCVL 216 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ +V ++++K M P + +K ++ + + V V Sbjct 217 LSATMPQ-EVLEVTKKFMRDPIRILVKRDELTLEGIKQFYVAV----------------- 258 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 E W + L Y I QA+IFC T+ D L Sbjct 259 ---------------EKEDWK--LDTLCDLYETVTIT-----QAVIFCNTRRKVDWLTDK 296 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +F+ +HGD + +R+ + F+ G R LI TD+ ARGID+ V Sbjct 297 L---------TSREFTVSAMHGDMEQAQREVIMREFRSGSSRVLITTDLLARGIDVQQVS 347 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V ++ ++ + + Y+T++ E Sbjct 348 LVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTSDDVRMLRDI-----EQFYSTQIDE 402 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 40/69 (58%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F M + E+ + V + P+ IQA +I ++ G DV+ A++G+GKT FSI ++Q Sbjct 40 FDNMELKEELLRGVYAYGFERPSAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAILQR 99 Query 64 VYETLKDQQ 72 + ++K Q Sbjct 100 IDPSIKAVQ 108 >sp|Q5W5U4|DDX4_BOVIN Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus OX=9913 GN=DDX4 PE=2 SV=1 Length=729 Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/349 (28%), Positives = 161/349 (46%), Gaps = 55/349 (16%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 +T ++F P+ +IV P+REL Q + +K+ +R ++I GG + Sbjct 357 ITASRFKELQEPECIIVAPTRELINQIY---LEARKFSFGTCVRAVVIYGGTQLGHSIRQ 413 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 + G +I+ TPGRL D++ K+ L QV++LVLDEAD +L G+ + ++ + P + Sbjct 414 IVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLIS-CPGMP 472 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 S +R Q ++ SAT ++++L+ + + K++ L Sbjct 473 SKEQR-QTLMFSATFPE-EIQRLAGEFL---------------------------KSNYL 503 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + +G+ DV + + + K E V ++ ++ ++F T Sbjct 504 FVAVGQVGGACRDVQ------------QTILQVGQYSKREKLVEILRNIGDERTMVFVET 551 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K D + + Q+ + S +HGDR+ ER+Q L F+ G L+ T VA Sbjct 552 KKKADFIATFLCQE---------KISTTSIHGDREQREREQALGDFRCGKCPVLVATSVA 602 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ARG+DI V +VIN LP YVHRIGR GR G AIS E + Sbjct 603 ARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESD 651 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + + + T +Q SIP+I GG D++ A+TGSGKT AF +P+ Sbjct 289 ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPI 348 Query 61 I 61 + Sbjct 349 L 349 >sp|A3LWX3|DHH1_PICST ATP-dependent RNA helicase DHH1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DHH1 PE=3 SV=1 Length=509 Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/351 (27%), Positives = 158/351 (45%), Gaps = 60/351 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT ++ K++ ++ ++ GG + +D + L + V ++V Sbjct 97 NKIQALILVPTRELALQTSQVVRTLGKHLG---IQCMVTTGGTSLKDDILRLNDPVHVLV 153 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL + +LS+ V+DEAD +LS+ + I ++ P K Q + Sbjct 154 GTPGRVLDLAARSVADLSECPLFVMDEADKMLSREFKGIIEQILEFFP------KNRQSL 207 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK +K ++ P ++L E ++ + E K H Sbjct 208 LFSATF-PLAVKSFMDKHLNKPYEINLMDELTLRGITQYYA---------FVEEKQKLHC 257 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 NT ++S+ +++Q+IIFC + + L + Sbjct 258 L--------NT--------LFSKL----------------QINQSIIFCNSTNRVELLAK 285 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G +SC H R + F++G VR L+C+D+ RGIDI V Sbjct 286 KITELG---------YSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLTRGIDIQAV 336 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 VIN P + Y+HRIGR GR +GLAI+L++ Y + G Sbjct 337 NVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYSLYKIEQELG 387 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + E+ + E + P+ IQ ESIP+ L G DVL A+ G+GKT +F IP +Q Sbjct 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGTGKTASFIIPSLQ 90 Query 63 IVYETLKDQQ 72 + L Q Sbjct 91 QIKPKLNKIQ 100 >sp|A2QY39|DHH1_ASPNC ATP-dependent RNA helicase dhh1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dhh1 PE=3 SV=1 Length=505 Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 107/380 (28%), Positives = 164/380 (43%), Gaps = 75/380 (20%) Query 258 LSKAPDG------YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 L++A +G +++ + N + T+T+ ALI+ P+RELA QT + K K Sbjct 88 LARAKNGTGKTAAFVIPTLERINPKSTKTQ-------ALILVPTRELALQTSHVCKTLGK 140 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 ++ + ++ GG D + L + V I+VGTPGR+ DL S G +LS+ V+DE Sbjct 141 HLG---INVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDE 197 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD LLS ++ I ++ + P K QV++ SAT VK +K M P ++L Sbjct 198 ADKLLSPEFTPVIEQLLSFHP------KDRQVMLFSATF-PLIVKSFKDKHMRNPYEINL 250 Query 432 KGEDSVPD-TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 E ++ T ++ V K L K I Sbjct 251 MDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQI-------------------------- 284 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 +Q+IIFC + + L + + G +SC H Sbjct 285 ----------------NQSIIFCNSTNRVELLAKKITELG---------YSCFYSHARML 319 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR Sbjct 320 QQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFG 379 Query 611 RMGLAISLVATEKEKVWYHV 630 +GLAI+L+ E Y + Sbjct 380 HLGLAINLINWEDRFNLYKI 399 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLE 107 >sp|Q7XMK8|RH6_ORYSJ DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0533000 PE=2 SV=1 Length=498 Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 153/346 (44%), Gaps = 60/346 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 NA + +I+ P+RELA QT K+ K++ K++ ++ GG + +D + L V ++V Sbjct 191 NAIQVVILVPTRELALQTSQVCKELGKHL---KIQVMVTTGGTSLKDDIVRLYQPVHLLV 247 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL G L LV+DEAD LLS + I + +P Q++ Sbjct 248 GTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLP------SNRQIL 301 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK+ +K + P ++L E ++ + ER Sbjct 302 MFSATF-PVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAF--------VEER------ 346 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 VH + ++S+ +++Q+IIFC + + L + Sbjct 347 --QKVHCLNT---------LFSKL----------------QINQSIIFCNSVNRVELLAK 379 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G +SC +H R + F+ G R L+CTD+ RGIDI V Sbjct 380 KITELG---------YSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 430 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VIN P + Y+HR+GR GR +GLA++L+ E Y + Sbjct 431 NVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 476 Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 184 >sp|Q9JIK5|DDX21_MOUSE Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Length=851 Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/340 (29%), Positives = 157/340 (46%), Gaps = 54/340 (16%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ L++ P+RELA Q + K KL GG Q+ + +G+DI+VG Sbjct 332 APQVLVLAPTRELANQVSKDFSDITK-----KLSVACFYGGTPYGGQIERMRSGIDILVG 386 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + GKL+L++++ +VLDE D +L G++D + + + S+ Q ++ Sbjct 387 TPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSE-DNPQTLL 445 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT P WV + + T V D + ++ K+ I Sbjct 446 FSATC---------------PHWVFNVAKKYMKSTYEQV--------DLIGKKTQKAAIT 482 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + + K + W+E ++ +R H+ + IIFC TK D L Q Sbjct 483 VEHLAIKCH----------WTERAAVIGD--VIRVYSGHQ-GRTIIFCETKKDAQELSQN 529 Query 526 F-IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 I+Q LHGD +R+ L+ F+ G+ L+ T+VAARG+DI V Sbjct 530 TCIKQ-----------DAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 578 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V+ P + ++Y+HR GR GRA R G+ I ++E Sbjct 579 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKEE 618 Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust. Identities = 23/75 (31%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 AFS + E + ++ +++L P IQA++ + G D++ A TG+GKT +F+IP+ Sbjct 259 AFSNFPISEETVKLLKARGVNFLFP--IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPL 316 Query 61 IQIVYETLKDQQEGK 75 I+ + L++++ G+ Sbjct 317 IEKLQGGLQERKRGR 331 >sp|P54824|DDX6_XENLA ATP-dependent RNA helicase ddx6 OS=Xenopus laevis OX=8355 GN=ddx6 PE=1 SV=2 Length=481 Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/333 (28%), Positives = 149/333 (45%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+++ P+RELA Q Q K++ K+ + GG RD + L++ V +V+ TP Sbjct 165 QAMVIVPTRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATP 222 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ G + ++ +VLDEAD LLSQ + + + +P K Q+++ S Sbjct 223 GRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFMQIMEDIIMTLP------KNRQILLYS 276 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+K + P ++L E ++ + + ER Sbjct 277 ATF-PLSVQKFMTLHLQKPYEINLMEELTLKGVTQYYAY--------VTER--------Q 319 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 VH + ++S +++Q+IIFC + + L + Sbjct 320 KVHCLNT---------LFSRL----------------QINQSIIFCNSSQRVELLAKKIS 354 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q G +SC +H + R + F+ G R L+CTD+ RGIDI V V Sbjct 355 QLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVV 405 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN P + Y+HRIGR GR +GLAI+L+ Sbjct 406 INFDFPKLAETYLHRIGRSGRFGHLGLAINLIT 438 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 97 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE 155 >sp|Q5ADL0|PRP5_CANAL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PRP5 PE=3 SV=1 Length=884 Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/352 (28%), Positives = 168/352 (48%), Gaps = 50/352 (14%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q I F K +N LR GG + +Q++ L+ GV+I+VGT Sbjct 368 PIGLILSPTRELALQIEKEILNFTKRNNN--LRVCCCYGGSSIENQINELKKGVEIIVGT 425 Query 347 PGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ DL++ LNL + F+VLDEAD + G+ +N++ + Q+ D Q Sbjct 426 PGRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKI---LTQIRPDR---QT 479 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT ++ L+++I+ P + + G V + VV L ++ Sbjct 480 VLFSATFPR-KMETLAKQILTDPVVIIVGGISVVAPEIKQEVV------------LFETS 526 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 D + + E + + Y + EH + ++F + D D L Sbjct 527 AEEQDKYKQQRV-----------EKLHDILTNYQI----EHPDSKILVFTEKQNDADELV 571 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD--VRFLICTDVAARGIDI 581 + +++ + +HG + +RK ++ F D + LI T +AARG+D+ Sbjct 572 ANLL---------SNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGLDV 622 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + VIN P+ ++YVHR+GR GRA G AI+ V++ + K +++ + Sbjct 623 RNLGLVINFDPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVFNLVKA 674 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/57 (39%), Positives = 38/57 (67%), Gaps = 4/57 (7%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTI 81 P+ IQ++++P IL G DV+ A+TGSGKT ++ +P+++ ++DQQ K + I Sbjct 317 PSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLR----HIQDQQFSKDNQGPI 369 >sp|A6ZXU0|DBP10_YEAS7 ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP10 PE=3 SV=1 Length=995 Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/349 (28%), Positives = 159/349 (46%), Gaps = 36/349 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QT N K F + +LR +L+ GG + +Q ++ D+++ TP Sbjct 209 RAVILSPSRELAMQTFNVFKDFAR---GTELRSVLLTGGDSLEEQFGMMMTNPDVIIATP 265 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+L V ++V DEAD L G+ + +N + +P Q ++ S Sbjct 266 GRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLASLPTTR------QTLLFS 319 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR-------LWERLG 460 ATL + V + +++ P V L E V + + + + + DR L E + Sbjct 320 ATLPNSLVDFVKAGLVN-PVLVRLDAETKVSENLEMLFLS-SKNADREANLLYILQEIIK 377 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA---------II 511 ++ + N+ A+S + + + ++ KM A I+ Sbjct 378 IPLATSEQLQKLQNSNNEADSDSDDENDRQKKRRNFKKEKFRKQKMPAANELPSEKATIL 437 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T+ + + Q G + ++G H RK+ L F+ G L+ Sbjct 438 FVPTRHHVEYISQLLRDCG---------YLISYIYGTLDQHARKRQLYNFRAGLTSILVV 488 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 TDVAARG+DI + VIN TLP + +VHR+GR RA G A S+VA Sbjct 489 TDVAARGVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVA 537 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 36/60 (60%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F G+ + ++ + PT IQ ++IPLIL D++ A TGSGKT AF +P+++ Sbjct 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197 >sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=RRP3 PE=3 SV=1 Length=493 Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 147/333 (44%), Gaps = 59/333 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A ++ P+RELA+Q + +R I+GG+ DQ L I++ TPG Sbjct 144 ACVLAPTRELAQQIKETFDSLGSLMG---VRTTCIVGGMNMMDQARDLMRKPHIIIATPG 200 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T +L ++FLV+DEAD LL + ++R+ IP + G+ + S Sbjct 201 RLMDHLENTKGFSLKNLKFLVMDEADRLLDMEFGPVLDRILKIIP---TKGR--TTYLFS 255 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ S + KL + P + + DT+ ++ V Sbjct 256 ATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVV------------------- 295 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 PG LK + + + E IIF RTK + + L Sbjct 296 ---------PGG------------LKNTFLIYLLNEFIGKTVIIFTRTKANAERLSGLC- 333 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +FS LHGD ++R L+ FK G L+ TDVAARG+DI V V Sbjct 334 --------NLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIV 385 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN +P + ++Y+HR+GR RA R G +ISLV+ Sbjct 386 INYDIPVDSKSYIHRVGRTARAGRSGKSISLVS 418 Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 3/70 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+++ ++PE+ QA + +++ PT IQA +IP L G DV+ A+TGSGKT AF+IP++ Sbjct 74 SFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILN 133 Query 63 IVYETLKDQQ 72 ++E DQQ Sbjct 134 KLWE---DQQ 140 >sp|Q54E49|DDX6_DICDI Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium discoideum OX=44689 GN=ddx6 PE=3 SV=1 Length=423 Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/348 (28%), Positives = 153/348 (44%), Gaps = 60/348 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ P+RELA QT K+ KY++ ++ + GG + +D + L N V I+V TP Sbjct 119 QVLILVPTRELALQTSQVCKELGKYMN---VQVMASTGGTSLKDDIMRLYNPVHILVATP 175 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL NLS +++DEAD LLSQ + + ++ N +PQ + Q+++ S Sbjct 176 GRVLDLAQKNVANLSNCHTMIMDEADKLLSQEFQPLVEQLINFLPQ------QRQILLFS 229 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT VK E + ++L E ++ + E K H Sbjct 230 ATF-PVTVKSFKEHYLQQAFEINLMEELTLKGVTQYYA---------FVEERQKIHCL-- 277 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 NT ++S+ +++Q+IIFC + + L + Sbjct 278 ------NT--------LFSKL----------------QINQSIIFCNSVNRVELLAKKIT 307 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G +SC +H R + F+ G R L+ +D+ RGIDI V V Sbjct 308 ELG---------YSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQDVNVV 358 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 IN P + Y+HRIGR GR +GLAI+L+ E Y + G Sbjct 359 INFDFPKHSETYLHRIGRSGRFGHLGLAINLITYEDRFSLYKIEQELG 406 Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 18/59 (31%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F ++ + ++ + + E ++ P+ IQ ++IP+ L G D++ A+ G+GKT +F IP ++ Sbjct 51 FDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALE 109 >sp|Q3B8Q1|DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1 Length=782 Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/340 (29%), Positives = 157/340 (46%), Gaps = 54/340 (16%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ L++ P+RELA Q + K KL GG Q+ + +G+DI+VG Sbjct 256 APQVLVLAPTRELANQVSKDFSDITK-----KLSVACFYGGTPYGGQIERMRSGIDILVG 310 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + GKL+L++++ +VLDE D +L G++D + + + S+ Q ++ Sbjct 311 TPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSE-DNPQTLL 369 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT P WV + + T V D + ++ K+ I Sbjct 370 FSATC---------------PHWVFNVAKKYMKSTYEQV--------DLIGKKTQKAAIT 406 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + + K + W+E ++ +R H+ + IIFC TK D L Q Sbjct 407 VEHLAIKCH----------WTERAAVIGD--VIRVYSGHQ-GRTIIFCETKKDAQELSQN 453 Query 526 F-IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 I+Q LHGD +R+ L+ F+ G+ L+ T+VAARG+DI V Sbjct 454 TCIKQ-----------DAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEV 502 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V+ P + ++Y+HR GR GRA R G+ I ++E Sbjct 503 DLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEE 542 Score = 41.2 bits (95), Expect = 0.040, Method: Compositional matrix adjust. Identities = 23/75 (31%), Positives = 46/75 (61%), Gaps = 4/75 (5%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 AFS + E + ++ +++L P IQA++ + G D++ A TG+GKT +F+IP+ Sbjct 183 AFSNFPISEETVKLLKARGVNFLFP--IQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPL 240 Query 61 IQIVYETLKDQQEGK 75 I+ + L++++ G+ Sbjct 241 IEKLQGGLQERKRGR 255 >sp|Q12389|DBP10_YEAST ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP10 PE=1 SV=2 Length=995 Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/349 (28%), Positives = 159/349 (46%), Gaps = 36/349 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QT N K F + +LR +L+ GG + +Q ++ D+++ TP Sbjct 209 RAVILSPSRELAMQTFNVFKDFAR---GTELRSVLLTGGDSLEEQFGMMMTNPDVIIATP 265 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+L V ++V DEAD L G+ + +N + +P Q ++ S Sbjct 266 GRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLASLPTTR------QTLLFS 319 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR-------LWERLG 460 ATL + V + +++ P V L E V + + + + + DR L E + Sbjct 320 ATLPNSLVDFVKAGLVN-PVLVRLDAETKVSENLEMLFLS-SKNADREANLLYILQEIIK 377 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA---------II 511 ++ + N+ A+S + + + ++ KM A I+ Sbjct 378 IPLATSEQLQKLQNSNNEADSDSDDENDRQKKRRNFKKEKFRKQKMPAANELPSEKATIL 437 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T+ + + Q G + ++G H RK+ L F+ G L+ Sbjct 438 FVPTRHHVEYISQLLRDCG---------YLISYIYGTLDQHARKRQLYNFRAGLTSILVV 488 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 TDVAARG+DI + VIN TLP + +VHR+GR RA G A S+VA Sbjct 489 TDVAARGVDIPMLANVINYTLPGSSKIFVHRVGRTARAGNKGWAYSIVA 537 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 36/60 (60%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F G+ + ++ + PT IQ ++IPLIL D++ A TGSGKT AF +P+++ Sbjct 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197 >sp|Q9DF36|DD21B_XENLA Nucleolar RNA helicase 2-B OS=Xenopus laevis OX=8355 GN=ddx21-b PE=2 SV=2 Length=800 Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/337 (29%), Positives = 155/337 (46%), Gaps = 59/337 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ +I+ P+RELA Q N ++ K KL+ GG + Q+ +++G+D +VG Sbjct 295 APRVIILTPTRELAIQITNELRSMTK-----KLKVACFYGGTPYQQQVFAIKDGIDFLVG 349 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ DLV +L+L+ ++ +VLDE D + G+S+ + + + + + Q ++ Sbjct 350 TPGRIRDLVQNYRLDLTALKHVVLDEVDMMFDVGFSEQVEEILS-VRYKPDPEENPQTLL 408 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDS--VPDTVHHVVVPVNPKTDRLWERLGKSH 463 SAT + + + VDL G S TV H+ + N R K+ Sbjct 409 FSATCPDWMYNVAKKYMRKQYEKVDLVGHRSQKAAITVEHLAIECN--------RSQKAA 460 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + D +++ G + + IIFC +K+ L Sbjct 461 VLGD--------------------IVQVYSGSHG----------KTIIFCDSKLQAHELS 490 Query 524 QY--FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 ++Q P LHGD + ER+ L+ F++G LI T+VAARG+DI Sbjct 491 TNCGSLKQSAKP-----------LHGDLQQKEREVVLKGFRQGTFEVLIATNVAARGLDI 539 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V V+ + P E YVHR GR GRA R G+ ISL Sbjct 540 PEVDLVVLYSAPKEADAYVHRSGRTGRAGRTGVCISL 576 Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust. Identities = 21/57 (37%), Positives = 36/57 (63%), Gaps = 5/57 (9%) Query 22 WLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGK 78 +L P IQ+++ + G DV++ A TG+GKT +F IP+++ + E DQQ +G+ Sbjct 243 YLFP--IQSKTFHTVYSGKDVVVQARTGTGKTFSFGIPLVERLSE---DQQPLARGR 294 >sp|Q4HZ42|DBP10_GIBZE ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP10 PE=3 SV=1 Length=897 Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/333 (30%), Positives = 154/333 (46%), Gaps = 28/333 (8%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ PSRELA QTL +K+F + D L+ +L++GG + +Q + DIV+ TP Sbjct 154 RALIMSPSRELAIQTLKVVKEFSRGTD---LKCVLLVGGDSLEEQFGYMAANPDIVIATP 210 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS ++++V DEAD L G++ + + + +P Q ++ S Sbjct 211 GRFLHLKVEMSLDLSSIKYVVFDEADRLFEMGFAAQLTEILHALPPSR------QSLLFS 264 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS-HIRT 466 ATL + V+ + + P+ V L E V + V + E+ G HI Sbjct 265 ATLPASLVE-FARAGLQDPSLVRLDAEQKVSPDLESAFFAV-----KGAEKEGSLLHILH 318 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D + + G N+ + + EH IIF TK + L Sbjct 319 DVIKMPVGSPEGVNNDSEKGSKKRKRGADGGSGKPTEH---STIIFTATKHHVEYLANLL 375 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I G F+ ++G R+ +E F+ G L+ TDVAARGIDI + Sbjct 376 IYAG---------FAVSYVYGSLDQTARRIQVEDFRMGKTNILVVTDVAARGIDIPVLAN 426 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN P + + +VHR+GR RA + G + SLV Sbjct 427 VINFDFPPQPKVFVHRVGRTARAGQRGWSYSLV 459 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IPLIL D++ A TGSGKT AF IP+I+ Sbjct 84 FQAMGLNNNLLKAITRKGFSVPTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVIPMIE 142 >sp|Q75EW9|RRP3_EREGS ATP-dependent rRNA helicase RRP3 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=RRP3 PE=3 SV=2 Length=486 Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/333 (29%), Positives = 145/333 (44%), Gaps = 59/333 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A I+ P+RELA+Q + +R I+GG+ DQ L I++ TPG Sbjct 137 ACILAPTRELAQQIKETFDSLGSLMG---VRTTCIVGGMNMMDQARDLMRKPHIIIATPG 193 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T L +++FLV+DEAD LL + ++R+ IP K + S Sbjct 194 RLMDHLENTKGFALRKLQFLVMDEADRLLDMEFGPVLDRILKNIPT-----KGRTTYLFS 248 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ S + KL + P + + DT+ ++ V Sbjct 249 ATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVV------------------- 288 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 PG LK + + + E I+F RTK + + + Sbjct 289 ---------PGG------------LKNTFLIYLLNEFIGKTTIVFTRTKANAERISGLC- 326 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +FS LHGD ++R L+ FK G L+ TDVAARG+DI V V Sbjct 327 --------NLLEFSATALHGDLNQNQRTGALDLFKAGKKSILVATDVAARGLDIPSVDLV 378 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN +P + ++Y+HR+GR RA R G ++SLV+ Sbjct 379 INYDIPVDSKSYIHRVGRTARAGRSGKSVSLVS 411 Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 28/71 (39%), Positives = 50/71 (70%), Gaps = 3/71 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F E+ ++PE+ +A + +++ PT IQ+++IP L G D++ A+TGSGKT AF+IP++ Sbjct 66 SSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFAIPIL 125 Query 62 QIVYETLKDQQ 72 ++ DQQ Sbjct 126 NRLWH---DQQ 133 >sp|A1CJ18|DHH1_ASPCL ATP-dependent RNA helicase dhh1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dhh1 PE=3 SV=1 Length=503 Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 107/380 (28%), Positives = 163/380 (43%), Gaps = 75/380 (20%) Query 258 LSKAPDG------YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 L++A +G +++ + N + T+T+ ALI+ P+RELA QT K K Sbjct 88 LARAKNGTGKTAAFVIPTLERINPKSTKTQ-------ALILVPTRELALQTSQVCKTLGK 140 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 ++ + ++ GG D + L + V I+VGTPGR+ DL S G +LS+ V+DE Sbjct 141 HLG---INVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDE 197 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD LLS ++ I ++ + P K QV++ SAT VK +K M P ++L Sbjct 198 ADKLLSPEFTPVIEQLLSFHP------KDRQVMLFSATF-PLIVKSFKDKHMRNPYEINL 250 Query 432 KGEDSVPD-TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 E ++ T ++ V K L K I Sbjct 251 MDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQI-------------------------- 284 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 +Q+IIFC + + L + + G +SC H Sbjct 285 ----------------NQSIIFCNSTNRVELLAKKITELG---------YSCFYSHARML 319 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR Sbjct 320 QQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFG 379 Query 611 RMGLAISLVATEKEKVWYHV 630 +GLAI+L+ E Y + Sbjct 380 HLGLAINLINWEDRFNLYKI 399 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLE 107 >sp|A1DNG2|DBP10_NEOFI ATP-dependent RNA helicase dbp10 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp10 PE=3 SV=1 Length=934 Score = 125 bits (313), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/346 (29%), Positives = 156/346 (45%), Gaps = 43/346 (12%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ PSRELA QTL +K+ + D L+ +L++GG + +Q +++ DIV+ TP Sbjct 162 RGLILSPSRELALQTLKVVKELGRGTD---LKSVLLVGGDSLEEQFAMMAGNPDIVIATP 218 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS +R++V DEAD L G++ + + + +P Q ++ S Sbjct 219 GRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPA------NRQTLLFS 272 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR------LWERL-- 459 ATL V+ + + PT V L E + + + V L E + Sbjct 273 ATLPKSLVE-FARAGLQEPTLVRLDTESKISPDLQNAFFSVKSSEKEGALLYILQEVIKM 331 Query 460 --GKSHI----RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 G + + + +D AK+ EM E AV + I+F Sbjct 332 PTGPTEVSQQRKEEDASAKNWKNKKRKRAEM----------EKAVNMRESPTKHSTIVFA 381 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 TK D L + G F+ ++G RK ++ F+ G L+ TD Sbjct 382 ATKHHVDYLYSLLSEAG---------FAVSYVYGSLDQTARKIQVQNFRTGMTNILVVTD 432 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VAARGIDI + VIN P + + ++HR+GR RA R G + SLV Sbjct 433 VAARGIDIPILANVINYDFPSQPKIFIHRVGRTARAGRKGWSYSLV 478 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 92 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIE 150 >sp|Q0CMM8|DBP10_ASPTN ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp10 PE=3 SV=1 Length=928 Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 103/353 (29%), Positives = 158/353 (45%), Gaps = 56/353 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ PSRELA QTL +K+ K D L+ +L++GG + +Q ++ DIV+ TP Sbjct 161 RGLILSPSRELALQTLKVVKELGKGTD---LKSVLLVGGDSLEEQFGMMAGNPDIVIATP 217 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS +R++V DEAD L G++ + + + +P Q ++ S Sbjct 218 GRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPTTR------QTLLFS 271 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PD-------------------TVHHVV-V 446 ATL V+ + + PT + L E + PD +H V+ + Sbjct 272 ATLPKSLVE-FARAGLQEPTLIRLDTESKISPDLQNAFFSVKSADKEGALLYILHEVIKM 330 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 P P + +RL + K N++ NS + + + AV + Sbjct 331 PTGPT--EVAQRLQEE---------KANSKDSKNSKKRKRSEM-----DKAVNMKESPTK 374 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 I+F TK D L + G F+ +G RK + F+ G Sbjct 375 HSTIVFAATKHHVDYLYSLLREAG---------FAVSYAYGSLDQTARKIQVNNFRTGLS 425 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 L+ TDVAARGIDI + VIN P + + +VHR+GR RA R G + SLV Sbjct 426 NILVVTDVAARGIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLV 478 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 91 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMDDRDVVGMARTGSGKTAAFVIPMIE 149 >sp|Q109G2|RH12_ORYSJ DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0503700 PE=2 SV=2 Length=521 Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 155/346 (45%), Gaps = 60/346 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 NA + +I+ P+RELA QT K+ KY++ ++ ++ GG + +D + L V ++V Sbjct 214 NAIQVVILVPTRELALQTSQVCKELGKYLN---IQVMVSTGGTSLKDDIMRLYQPVHLLV 270 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL G L LV+DEAD LL+ + I ++ + +P Q++ Sbjct 271 GTPGRILDLTRKGICVLKDCSMLVMDEADKLLAPEFQPSIEQLIHFLP------ANRQLL 324 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK EK + P ++L E ++ + + ER Sbjct 325 MFSATF-PVTVKDFKEKYLPRPYVINLMDELTLKGITQYYAF--------VEER------ 369 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 VH + ++S+ +++Q+IIFC + + L + Sbjct 370 --QKVHCLNT---------LFSKL----------------QINQSIIFCNSVNRVELLAK 402 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G +SC +H R + F+ G R L+CTD+ RGIDI V Sbjct 403 KITELG---------YSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 453 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VIN P + Y+HR+GR GR +GLA++L+ E Y + Sbjct 454 NVVINFDFPKTSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 499 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 207 >sp|D0PV95|DDX3_CAEEL ATP-dependent RNA helicase laf-1 OS=Caenorhabditis elegans OX=6239 GN=laf-1 PE=1 SV=1 Length=708 Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 96/342 (28%), Positives = 153/342 (45%), Gaps = 56/342 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL+ Q N ++F P LL G +DQ+ L G I++ T Sbjct 316 PSALVLSPTRELSLQIFNESRKFA--YRTPITSALLYGGRENYKDQIHKLRLGCHILIAT 373 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ G + + R+LVLDEAD +L G+ PQ+ Q++ C Sbjct 374 PGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFE----------PQIR------QIVEC 417 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT-VHHVVVPVNPKTDRLWERLGKSHIR 465 + + S + + + FP + L +D + + V V V ++ + +++ Sbjct 418 N-RMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVGSTSENIMQKI------ 470 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH-KMDQAIIFCRTKIDCDNLEQ 524 +W E + K Y + + ++F TK +L Sbjct 471 ------------------VWVEEDE--KRSYLMDLLDATGDSSLTLVFVETKRGASDLAY 510 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Y +Q + V +HGD K ER+++L+ F+ G L+ T VAARG+DI V Sbjct 511 YLNRQ---------NYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNV 561 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +VIN LP + YVHRIGR GR +GLA S + + Sbjct 562 KHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNRNI 603 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ FS++ + I + ++ + PT +Q SIP + GG D++ A+TGSGKT AF +P+ Sbjct 230 ISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPL 289 Query 61 IQIVYE 66 + + + Sbjct 290 VNAILQ 295 >sp|Q2U5A2|DHH1_ASPOR ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dhh1 PE=3 SV=1 Length=511 Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 105/369 (28%), Positives = 161/369 (44%), Gaps = 75/369 (20%) Query 258 LSKAPDG------YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 L++A +G +++ + N + T+T+ ALI+ P+RELA QT + K K Sbjct 88 LARAKNGTGKTAAFVIPTLERINPKSTKTQ-------ALILVPTRELALQTSHVCKTLGK 140 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 ++ + ++ GG D + L + V I+VGTPGR+ DL S G +LS+ V+DE Sbjct 141 HLG---INVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDE 197 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD LLS ++ I ++ + P K QV++ SAT VK +K M P ++L Sbjct 198 ADKLLSPEFTPVIEQLLSFHP------KDRQVMLFSATF-PLIVKSFKDKHMRNPYEINL 250 Query 432 KGEDSVPD-TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 E ++ T ++ V K L K I Sbjct 251 MDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQI-------------------------- 284 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 +Q+IIFC + + L + + G +SC H Sbjct 285 ----------------NQSIIFCNSTNRVELLAKKITELG---------YSCFYSHARML 319 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR Sbjct 320 QQHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFG 379 Query 611 RMGLAISLV 619 +GLAI+L+ Sbjct 380 HLGLAINLI 388 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query 64 V 64 + Sbjct 109 I 109 >sp|Q5RC67|DDX23_PONAB Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii OX=9601 GN=DDX23 PE=2 SV=1 Length=820 Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 104/357 (29%), Positives = 157/357 (44%), Gaps = 59/357 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA+Q +F K + +R + +IGG++ DQ L G +IV+ T Sbjct 469 PYAIILAPTRELAQQIEEETIKFGKPLG---IRTVAVIGGISREDQGFRLRMGCEIVIAT 525 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ L S+ ++VLDEAD ++ G+ + ++ +P + Sbjct 526 PGRLIDVLENRYLVPSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDP 585 Query 407 SATLHSFDV--KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 L +F+ K + +M T +P V ERL +S++ Sbjct 586 EKMLANFESGKHKYRQTVMFTAT---------MPPAV---------------ERLARSYL 621 Query 465 RTDDVHAKDNTRPG------ANSPEMWSEAIKILKGEYAVR----AIKEHKMDQAII-FC 513 R RP A P E L E R AI E D II F Sbjct 622 R----------RPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFV 671 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 K CD L + + G ++ LHG + +R+ L K G L+ TD Sbjct 672 NQKKGCDVLAKSLEKMG---------YNACTLHGGKGQEQREFALSNLKAGAKDILVATD 722 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VA RGIDI V V+N + ++Y+HRIGR GRA + G+AI+ + E V+Y + Sbjct 723 VAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYEL 779 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + + P I + +++ + PT IQ ++IP+ L D++ AETGSGKT AF IP+ Sbjct 390 IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPL 449 Query 61 I 61 + Sbjct 450 L 450 >sp|Q2UKX3|DBP8_ASPOR ATP-dependent RNA helicase dbp8 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp8 PE=3 SV=1 Length=443 Score = 121 bits (303), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 104/342 (30%), Positives = 154/342 (45%), Gaps = 64/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLENGVDIVVGTP 347 A+++ P+RELA Q IK I P+ ++ LLI GG R Q L +V+ TP Sbjct 84 AVVLTPTRELALQIYEQIKA----ISAPQSMKPLLITGGTDMRSQALALSQRPHVVIATP 139 Query 348 GRLDDLVSTGK----LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 GRL D ++T L +VR +VLDEAD LL+ G + + + + +R Q Sbjct 140 GRLADHINTSGEDTVCGLKRVRMVVLDEADRLLAPGPGSMLPDVETCLSALPPSSER-QT 198 Query 404 IVCSATLHSFDVKKLSE------KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 ++ +ATL + +V+ L K F T + + ++P T+ + V P T R E Sbjct 199 LLFTATL-TPEVRALKSMPRAENKPPVFVTEISTENNGAIPPTLKQTYLKV-PMTHR--E 254 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 + T+ +++T+P AIIFC Sbjct 255 AFLHVLLSTE----RNSTKP-------------------------------AIIFCNHTK 279 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D LE+ + H+ + LH ER NL RF+ R L+ TDVA+R Sbjct 280 TADLLERML-------RRLSHRVTS--LHSLLPQSERNSNLARFRASAARILVATDVASR 330 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 G+DI V VIN +P +YVHR+GR RA R G A++LV Sbjct 331 GLDIPSVSLVINFDVPRNPDDYVHRVGRTARAGRHGEAVTLV 372 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 34/58 (59%), Gaps = 0/58 (0%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + + V P + ++ M PT IQ IP IL G D + + TGSGKT AF++P++Q Sbjct 16 TTLNVSPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFAVPILQ 73 >sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp3 PE=3 SV=1 Length=465 Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 103/367 (28%), Positives = 161/367 (44%), Gaps = 64/367 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+ A+++ P+RELA Q +QF+ + +R ++I+GG+ Q L ++ Sbjct 112 PSPFFAVVLAPTRELAYQI---SEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVL 168 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T +L +++L++DEAD LL + I+++ IP + Sbjct 169 VCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPH------ERR 222 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLG 460 ++ SAT+ S V+KL +H P V + + S DT+ ++ P Sbjct 223 TLLFSATMTS-KVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFK----------- 270 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 H K Y V + E + IIF RT D Sbjct 271 ---------H----------------------KDTYLVYLVNELAGNSIIIFARTVNDTQ 299 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L G FS + LHG R L +FK G L+ TDVAARG+D Sbjct 300 RLAILLRTLG---------FSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLD 350 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 I V VIN +P + + Y+HR+GR RA R G +I+LV + + + ++ GK Sbjct 351 IPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRIEATIGKKMQE 410 Query 641 TRLKEDG 647 + ++G Sbjct 411 YEIDKEG 417 Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 30/59 (51%), Positives = 44/59 (75%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E+GV+ E+ +A E++ + PT IQ E+IP++L DV+ A+TGSGKT AF++PVIQ Sbjct 48 FKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQ 106 >sp|A5DDF4|PRP5_PICGU Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PRP5 PE=3 SV=2 Length=862 Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 96/345 (28%), Positives = 165/345 (48%), Gaps = 54/345 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P +I+ P+RELA Q + F + ++ L GG Q++ L+ G +I+V Sbjct 339 DGPIGVILTPTRELALQIQKELVNFTQAVE---LSVCCCYGGSPIESQIADLKRGTEIIV 395 Query 345 GTPGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 GTPGR+ DL++ G++ NL + FLVLDEAD + G+ +N++ +QI Sbjct 396 GTPGRVIDLLAANGGRVTNLRRTTFLVLDEADRMFDMGFEPQVNKVLSQI------RPDK 449 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 Q+++ SAT ++ L+ + P + G V + VV ++ D ++L Sbjct 450 QMVLFSATFPK-KLESLARSFLVDPIEIVAGGISVVAPEITQRVVLIDDSGDISQKKL-- 506 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 +A+ + E++V E + +IF + D+ Sbjct 507 -------------------------QALLKIVDEFSV----EDPEGKILIFVDKQEAADD 537 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK-KGDVRFLICTDVAARGID 580 L + +Q SC+ +HG + +RK +++F K +R LI T +AARG+D Sbjct 538 LMVRLL---------NNQISCIVIHGGKDQVDRKHAIKQFSDKNGLRVLIATSIAARGLD 588 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + G+ VIN P ++YVHR+GR GRA G A++LV + +E+ Sbjct 589 VRGLNLVINYDAPSHMEDYVHRVGRTGRAGATGTAVTLVLSSQER 633 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 41/60 (68%), Gaps = 1/60 (2%) Query 4 FSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 ++++G+ I +EE + + P+ IQ++++P I+ G D++ A TGSGKT AF IP+I+ Sbjct 268 WAQLGLPSSIMTVLEEKLGYDTPSPIQSQALPAIMSGRDIIGVANTGSGKTLAFVIPLIR 327 >sp|Q0CBE1|DHH1_ASPTN ATP-dependent RNA helicase dhh1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dhh1 PE=3 SV=1 Length=509 Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 102/357 (29%), Positives = 155/357 (43%), Gaps = 69/357 (19%) Query 264 GYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 +++ + N + T+T+ ALI+ P+RELA QT + K K++ + ++ Sbjct 100 AFVIPTLERINPKSTKTQ-------ALILVPTRELALQTSHVCKTLGKHLG---INVMVT 149 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG D + L + V I+VGTPGR+ DL S G +LS+ V+DEAD LLS ++ Sbjct 150 TGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPV 209 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD-TVH 442 I ++ + P K QV++ SAT VK +K M P ++L E ++ T + Sbjct 210 IEQLLSFHP------KDRQVMLFSATF-PLIVKSFKDKHMRNPYEINLMDELTLRGITQY 262 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V K L K I Sbjct 263 YAFVEEKQKVHCLNTLFSKLQI-------------------------------------- 284 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +Q+IIFC + + L + + G +SC H R + F+ Sbjct 285 ----NQSIIFCNSTNRVELLAKKITELG---------YSCFYSHARMLQQHRNRVFHDFR 331 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ Sbjct 332 NGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLI 388 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query 64 V 64 + Sbjct 109 I 109 >sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=PRP5 PE=3 SV=1 Length=1156 Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 95/353 (27%), Positives = 165/353 (47%), Gaps = 63/353 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +I+ P+RELA Q ++ F K + LR + GG +Q++ ++ DIVV T Sbjct 550 PVGIIMTPTRELAVQIYREMRPFIKALG---LRAACVYGGAPISEQIAEMKKTADIVVAT 606 Query 347 PGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGRL DL++ +G++ NL +V +LVLDEAD + G+ + ++ N I Q Sbjct 607 PGRLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNI------RPDRQT 660 Query 404 IVCSATLHSFDVKKLSEKIM-HFPTWVDLKGEDSVPDTVHHVVVPVNPKTD--RLWERLG 460 ++ SAT ++ L+ K++ + P + + G V + +V + T RL E LG Sbjct 661 VLFSATFPK-QMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLEILG 719 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + + R D + +IF + D Sbjct 720 ELYNREKDA--------------------------------------RTLIFVDRQEAAD 741 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +L + I++G + + LHG + +R + + FK G+V + T VAARG+D Sbjct 742 DLLKDLIRKG---------YVTMSLHGGKDQVDRDETISDFKAGNVPIVTATSVAARGLD 792 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + + VIN +P+ ++YVHR GR GRA + G I+ + E+++ + ++ Sbjct 793 VKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDIIAA 845 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/72 (32%), Positives = 43/72 (60%), Gaps = 4/72 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S G+ ++ + + PT IQ++++P I+ G D++ A+TGSGKT AF +P Sbjct 475 LTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLP- 533 Query 61 IQIVYETLKDQQ 72 ++ +KDQ+ Sbjct 534 ---MFRHIKDQR 542 >sp|Q4WWD3|DHH1_ASPFU ATP-dependent RNA helicase dhh1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dhh1 PE=3 SV=1 Length=507 Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 105/368 (29%), Positives = 164/368 (45%), Gaps = 73/368 (20%) Query 258 LSKAPDG------YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 L++A +G +++ + N + T+T+ ALI+ P+RELA QT K K Sbjct 88 LARAKNGTGKTAAFVIPTLERINPKSTKTQ-------ALILVPTRELALQTSQVCKTLGK 140 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 ++ + ++ GG D + L + V I+VGTPGR+ DL S G +LS+ V+DE Sbjct 141 HLG---INVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDE 197 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD LLS ++ I ++ + P K QV++ SAT VK +K M P ++L Sbjct 198 ADKLLSPEFTPVIEQLLSFHP------KDRQVMLFSATF-PLIVKSFKDKHMRNPYEINL 250 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E ++ + E K H NT ++S+ Sbjct 251 MDELTLRGITQYYA---------FVEEKQKVHCL--------NT--------LFSKL--- 282 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 +++Q+IIFC + + L + + G +SC H Sbjct 283 -------------QINQSIIFCNSTNRVELLAKKITELG---------YSCFYSHARMLQ 320 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR Sbjct 321 QHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGH 380 Query 612 MGLAISLV 619 +GLAI+L+ Sbjct 381 LGLAINLI 388 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLE 107 >sp|Q09181|DHH1_SCHPO Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ste13 PE=3 SV=1 Length=485 Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 93/333 (28%), Positives = 148/333 (44%), Gaps = 60/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ P+RELA QT K K+++ ++ ++ GG RD + L + V IVVGTP Sbjct 114 QTLILVPTRELALQTSQVCKTLGKHMN---VKVMVTTGGTTLRDDIIRLNDTVHIVVGTP 170 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL G + S+ V+DEAD LLS ++ I ++ + P K Q+ + S Sbjct 171 GRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFP------KNRQISLYS 224 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT VK +K ++ P ++L E ++ + D Sbjct 225 ATF-PLIVKNFMDKHLNKPYEINLMDELTLRGVTQYYAF-------------------VD 264 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 + S+ + L ++ + +++Q+IIFC + + L + Sbjct 265 E-----------------SQKVHCLNTLFS-----KLQINQSIIFCNSTNRVELLAKKIT 302 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G +SC H R + F+ G R L+C+D+ RGIDI V V Sbjct 303 ELG---------YSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVV 353 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN P + Y+HRIGR GR GLAIS ++ Sbjct 354 INFDFPKNAETYLHRIGRSGRFGHRGLAISFIS 386 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEK 105 Query 64 V 64 V Sbjct 106 V 106 >sp|A4RIF1|DBP5_PYRO7 ATP-dependent RNA helicase DBP5 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP5 PE=3 SV=2 Length=477 Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 111/386 (29%), Positives = 176/386 (46%), Gaps = 84/386 (22%) Query 258 LSKAPDGYIVKSQHSGNAQ--------VTQTKF-LPNAPKALIVEPSRELAEQTLNNIKQ 308 LS P I +SQ SG + +++ F PN P+AL + PSRELA Q + I+ Sbjct 104 LSNPPRNMIAQSQ-SGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQS 162 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLENGV--DIVVGTPGRLDDLVSTGKLNLSQVRF 366 ++ L I G +R E GV ++VVGTPG + DL+ + ++SQ++ Sbjct 163 IGQFCTG--LVVDAAIPGAISR------ETGVKANVVVGTPGTVMDLIRRRQFDVSQLKL 214 Query 367 LVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 LV+DEAD +L QG + R+ N +P K +Q ++ SAT Sbjct 215 LVVDEADNMLDQQGLGEQCVRVKNMLP------KTIQTLLFSATF--------------- 253 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 PD V P+ +++ +R ++ K ++ + P + Sbjct 254 ------------PDHVKSYAEKFAPQANQM-------KLRQQELTVKGISQMYMDCPSL- 293 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 E ++L Y + I ++IF +T+ D +++ + GH+ S L Sbjct 294 KEKYEVLCKLYGLMTIGS-----SVIFVKTRESADEIQRRM-------EADGHKVSA--L 339 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP--------DEKQ 597 HG + ER Q L+ F+ G + LI T+V ARGID+ V VIN +P + + Sbjct 340 HGAFQGQERDQLLDDFRSGKSKVLITTNVLARGIDVSSVSMVINYDIPMKGPGDQSPDAE 399 Query 598 NYVHRIGRVGRAERMGLAISLVATEK 623 Y+HRIGR GR R+G++IS V K Sbjct 400 TYLHRIGRTGRFGRVGVSISFVHDRK 425 Score = 38.1 bits (87), Expect = 0.34, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 2/61 (3%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPVIQI 63 E+G+ I + M++ P+ IQA ++PL+L +++ +++G+GKTGAF + ++ Sbjct 73 ELGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSR 132 Query 64 V 64 V Sbjct 133 V 133 >sp|P0C2N8|DRS1_NEUCR ATP-dependent RNA helicase drs1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-11 PE=3 SV=1 Length=829 Score = 123 bits (309), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 97/340 (29%), Positives = 152/340 (45%), Gaps = 57/340 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +I+ P+RELA Q + + D ++ L +GG++ + Q + L D+V+ TP Sbjct 366 RVVILTPTRELAIQCHAVAVKLASHTD---IKFCLAVGGLSLKVQEAELRLRPDVVIATP 422 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + + LVLDEAD +L G++D +N + +P K Q ++ Sbjct 423 GRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADELNEILTTLP------KSRQTMLF 476 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ S V +L ++ P + + T+ V + P Sbjct 477 SATMTS-SVDRLIRAGLNKPVRIMADSQKKTAGTLVQEFVRLRP---------------- 519 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +++ R G Y + K ++ IIF R K + F Sbjct 520 ----GRESKREG-----------------YLLHICKTIYTERVIIFFRQKKIAHKMRIIF 558 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G SC LHG +R Q++E F+ G V FL+ TD+A+RG+DI GV Sbjct 559 GLFG---------LSCAELHGSMNQAQRIQSVEDFRDGKVNFLLATDLASRGLDIKGVDT 609 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN P + YVHR+GR RA R G AI+L A KV Sbjct 610 VINYEAPQTPEIYVHRVGRTARAGRSGTAITLAAEPDRKV 649 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/62 (42%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M++F EM + I + + + + PT IQA++IP+ L G DV+ A TGSGKT AF +P+ Sbjct 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPI 351 Query 61 IQ 62 ++ Sbjct 352 LE 353 >sp|Q6BL34|DBP10_DEBHA ATP-dependent RNA helicase DBP10 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP10 PE=3 SV=2 Length=932 Score = 124 bits (310), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 104/350 (30%), Positives = 156/350 (45%), Gaps = 33/350 (9%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QT +K+F K D LR +++IGG + +Q S + D++V TP Sbjct 169 RAIILSPSRELASQTFKQVKEFSKGTD---LRSIVLIGGDSLEEQFSSMMTNPDVIVATP 225 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L +L L V ++V DEAD L G+++ +N + +P Q ++ S Sbjct 226 GRFLHLKVEMELELKTVEYIVFDEADRLFEMGFAEQLNELIAALPSSR------QSLLFS 279 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV--NPKTDRLWERLG----- 460 ATL + ++ + P V L E + D + + N + L L Sbjct 280 ATLPR-SLIDFAKAGLTNPVLVRLDAETKISDQLQMAFFSIKNNEREASLLYVLQEVIKL 338 Query 461 -----KSHIRTDDVHAKDN-TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 + R D+ +DN + A + K E A IIF Sbjct 339 PLASPEEVKRYSDMEKRDNGSEDEAEDENNNKKKRFKFKKERLPPANMLPSKHSTIIFVP 398 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK + + G + ++G H RKQ L +F+ G L+ TDV Sbjct 399 TKHHVEYVTTLLKDAG---------YLVSYIYGTLDQHARKQQLYQFRIGMTSLLVVTDV 449 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 AARGIDI + V+N TLP + ++HR+GR RA G A S+V EKE Sbjct 450 AARGIDIPILANVVNYTLPGSSKIFIHRVGRTARAGNSGWAYSIV-NEKE 498 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 20/38 (53%), Positives = 29/38 (76%), Gaps = 0/38 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 PT IQ ++IPLI+ DV+ A TGSGKT AF++P+++ Sbjct 120 PTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVE 157 >sp|Q2H1Q8|RRP3_CHAGB ATP-dependent rRNA helicase RRP3 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=RRP3 PE=3 SV=1 Length=493 Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 101/359 (28%), Positives = 152/359 (42%), Gaps = 59/359 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q + + I LR LI+GG+ Q L +VV TPG Sbjct 136 ALVLAPTRELAAQIAQSFEALGSLIS---LRCALILGGLDMVQQAIALGKKPHVVVATPG 192 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L T +L +R+LV+DEAD LL + ++++ +P + + + S Sbjct 193 RLLDHLEKTKGFSLRNLRYLVMDEADRLLDMDFGPILDKILKFLP------RERRTFLFS 246 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ S V+ L + P V S+ + + V L ++++ Sbjct 247 ATMSS-KVESLQRACLRDPLKV------SISSSKYQTV-----------STLVQNYVFIP 288 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 H K Y + E IIF RT I+ + Sbjct 289 HTH----------------------KDTYLIYLCNEFAGQTIIIFTRTVIETQRIAILLR 326 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 G G + LHG R L +F+ G L+ TDVAARG+DI V V Sbjct 327 TLGMG---------AIPLHGGLSQSARLGALNKFRAGSRDILVATDVAARGLDIPNVDCV 377 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 +N+ LP + + YVHR+GR RA R G AIS V ++W + ++ G L++D Sbjct 378 LNLDLPGDSKTYVHRVGRTARAGRSGHAISFVTQYDLELWLRIEAALGTKLTEYSLEKD 436 Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 44/63 (70%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++G++ + A +E+ W PT IQ ESIPL L D++ AETGSGKTGAF++P++Q Sbjct 67 FQDLGIVDSLCDACKELGWKKPTPIQQESIPLALQDRDIIGLAETGSGKTGAFALPILQA 126 Query 64 VYE 66 + + Sbjct 127 LLD 129 >sp|Q6H7S2|RH8_ORYSJ DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0641800 PE=2 SV=2 Length=508 Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/346 (27%), Positives = 154/346 (45%), Gaps = 60/346 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 NA + +I+ P+RELA QT K+ K++ K++ ++ GG + +D + L V ++V Sbjct 201 NAIQVVILVPTRELALQTSQVCKELGKHL---KIQVMVTTGGTSLKDDIIRLYQPVHLLV 257 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL G L L++DEAD LLS + + ++ +P Q++ Sbjct 258 GTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASR------QIL 311 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT VK+ +K + P ++L E ++ + ER Sbjct 312 MFSATF-PVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAF--------VEER------ 356 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 VH + ++S+ +++Q+IIFC + + L + Sbjct 357 --QKVHCLNT---------LFSKL----------------QINQSIIFCNSVNRVELLAK 389 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G +SC +H R + F+ G R L+CTD+ RGIDI V Sbjct 390 KITELG---------YSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 440 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VIN P + Y+HR+GR GR +GLA++L+ E Y + Sbjct 441 NVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 486 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 194 >sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP10 PE=3 SV=1 Length=900 Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/336 (29%), Positives = 155/336 (46%), Gaps = 29/336 (9%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ PSRELA QTL +K+ + D L+ +L++GG + +Q + + DI++ TP Sbjct 158 RALILSPSRELALQTLKVVKELGRGTD---LKSVLLVGGDSLEEQFEYMASNPDIIIATP 214 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS +R++V DEAD L G++ + + + +P Q ++ S Sbjct 215 GRFLHLKVEMSLDLSSIRYVVFDEADRLFEMGFATQLTEILHGLPSSR------QTLLFS 268 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV--VVPVNPKTDRLWERLGKS-HI 464 ATL V+ + + P + L E + + + V + K L L + I Sbjct 269 ATLPKSLVE-FARAGLQEPILIRLDAESKISPDLQNAFFTVKSSEKEGALLHVLHEVIKI 327 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA-IIFCRTKIDCDNLE 523 T + A + E + K + E + KE + + IIF TK D L Sbjct 328 PTGETEALKRAK------EEVKHSKKRKRSEVTSNSHKESPTEHSTIIFTATKHHVDYLT 381 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G F+ +G RK ++ F+ G L+ TDVAARGIDI Sbjct 382 SILRTSG---------FAVSYAYGSLDQTARKIEVQNFRDGITHILVVTDVAARGIDIPI 432 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + VIN P + + +VHR+GR RA + G + SL+ Sbjct 433 LSNVINYDFPSQPKIFVHRVGRTARAGKTGWSYSLI 468 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +G+ + +A+ + +PT IQ ++IPL+L DV+ A TGSGKT AF IP+I+ Sbjct 88 FQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIE 146 >sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana OX=3702 GN=RH10 PE=1 SV=2 Length=456 Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/341 (28%), Positives = 150/341 (44%), Gaps = 61/341 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A ++ P+RELA Q +QF+ + LR +++GG+ Q L ++V TPG Sbjct 92 ACVLSPTRELAIQI---AEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPG 148 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D + T +L +++LVLDEAD LL++ + +N++ +IP + + S Sbjct 149 RLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPL------ERKTFLFS 202 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ V+KL + P ++ + S DT+ K R Sbjct 203 ATMTK-KVRKLQRACLRNPVKIEAASKYSTVDTL-------------------KQQYRFV 242 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 KD Y V + E ++IF RT CD + Sbjct 243 AAKYKDC---------------------YLVYILSEMPESTSMIFTRT---CDGTRFLAL 278 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F + + G +R L +FK G+ L+CTDVA+RG+DI V V Sbjct 279 VL------RSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVV 332 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 IN +P ++Y+HR+GR RA R G+ ISLV + E WY Sbjct 333 INYDIPTNSKDYIHRVGRTARAGRSGVGISLV-NQYELEWY 372 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/75 (49%), Positives = 53/75 (71%), Gaps = 1/75 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+GV E+ +A E + W P+ IQAE++P L G DV+ A+TGSGKTGAF+IP++Q Sbjct 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70 Query 64 VYETLKDQQEGKKGK 78 + E + D E KKG+ Sbjct 71 LLEYVYD-SEPKKGR 84 >sp|Q4R4Y9|IF4A2_MACFA Eukaryotic initiation factor 4A-II OS=Macaca fascicularis OX=9541 GN=EIF4A2 PE=2 SV=1 Length=408 Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/359 (30%), Positives = 167/359 (47%), Gaps = 64/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGT 346 +AL++ P+RELA+Q I Y+ IGG R+++ L+ IVVGT Sbjct 104 QALVLAPTRELAQQIQKVILALGDYMGATCHA---CIGGTNVRNEMQKLQAEAPHIVVGT 160 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D+++ L+ ++ VLDEADG+LS+G+ D I + ++ +QV++ Sbjct 161 PGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQIYEIFQKL------NTSIQVVLL 214 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + DV ++++K M P + +K E+ + + + V ER Sbjct 215 SATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINV--------ER-------- 257 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E W + L Y I QA+IF T+ D L + Sbjct 258 ----------------EEWK--LDTLCDLYETLTIT-----QAVIFLNTRRKVDWLTEKM 294 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 F+ LHGD ER + F+ G R LI TD+ ARGID+ V Sbjct 295 ---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 345 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + YNT ++E Sbjct 346 VINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ETFYNTTVEE 399 Score = 37.0 bits (84), Expect = 0.66, Method: Compositional matrix adjust. Identities = 19/69 (28%), Positives = 37/69 (54%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 36 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 95 Query 64 VYETLKDQQ 72 + K+ Q Sbjct 96 LEIEFKETQ 104 >sp|A1CTZ6|DBP10_ASPCL ATP-dependent RNA helicase dbp10 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp10 PE=3 SV=1 Length=935 Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 103/353 (29%), Positives = 159/353 (45%), Gaps = 57/353 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ PSRELA QTL +K+ K D L+ +L++GG + +Q +++ DIV+ TP Sbjct 161 RGLILSPSRELALQTLKVVKELGKGTD---LKCVLLVGGDSLEEQFTMMAGNPDIVIATP 217 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+L +R++V DEAD L G++ + + + +P Q ++ S Sbjct 218 GRFLHLKVEMNLDLYSIRYVVFDEADRLFEMGFAAQLTEILHGLP------PNRQTLLFS 271 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PD-------------------TVHHVV-V 446 ATL V+ + + PT + L E + PD +H V+ + Sbjct 272 ATLPKSLVE-FARAGLQEPTLIRLDTESKISPDLQNAFFSIKSSEKEGALLYILHEVIKM 330 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 P P T+ +R G +D A+ + EM E AV + Sbjct 331 PTGP-TEMAQQRQG------EDASARFSKANKRKRAEM----------EKAVNTKESPTQ 373 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 I+F TK D L + G F+ ++G RK ++ F+ G Sbjct 374 HSTIVFAATKHHVDYLYSLLHEAG---------FAVSYVYGALDQTARKIQVQNFRSGLS 424 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 L+ TDVAARGIDI + VIN P + + ++HR+GR RA R G + SLV Sbjct 425 NILVVTDVAARGIDIPILANVINYDFPSQPKIFIHRVGRTARAGRKGWSYSLV 477 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 91 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIE 149 >sp|Q4HY71|DBP5_GIBZE ATP-dependent RNA helicase DBP5 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP5 PE=3 SV=1 Length=488 Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 110/383 (29%), Positives = 167/383 (44%), Gaps = 78/383 (20%) Query 258 LSKAPDGYIVKSQH-SGNAQVTQTKFL-------PNAPKALIVEPSRELAEQTLNNIKQF 309 LS P + +SQ +G T L P+ P+AL + PSRELA Q I Sbjct 110 LSDPPRNMLAQSQSGTGKTAAFVTAILSRVDFSKPDQPQALALAPSRELARQIEGVINAI 169 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 ++++N K+ I GV R + ++VGTPG + D++ +L++SQ+R LVL Sbjct 170 GRFVENKKVAA--AIPGVLPRGE----PVRASVIVGTPGTVMDIIRRRQLDISQLRVLVL 223 Query 370 DEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 DEAD +L QG D ++ N +P K +QV++ SAT Sbjct 224 DEADNMLDQQGLGDQCLKVKNMLP------KEIQVLLFSATF------------------ 259 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 P+ V P L +L +S + + P N Sbjct 260 ---------PENVMKYAGKFAPNAHSL--KLQRSELTVKGISQMFIDCPDDNM------K 302 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 IL Y + I Q++IF +T+ +E+ + GH+ S LH Sbjct 303 YDILCKLYGLMTI-----GQSVIFVKTRDSASEIERRMVAD-------GHKVS--ALHAA 348 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP--------DEKQNYV 600 ER L +F++G+ + LI T+V ARGID+ V VIN +P + + Y+ Sbjct 349 FDGAERDNLLTKFRQGENKVLITTNVLARGIDVSSVSMVINYDIPMKGRGDTEPDAETYL 408 Query 601 HRIGRVGRAERMGLAISLVATEK 623 HRIGR GR R+G++IS V +K Sbjct 409 HRIGRTGRFGRVGVSISFVYDKK 431 >sp|Q5T1V6|DDX59_HUMAN Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens OX=9606 GN=DDX59 PE=1 SV=1 Length=619 Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 89/357 (25%), Positives = 165/357 (46%), Gaps = 61/357 (17%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + + F P ALI+ P+RELA Q K+ + P+++ +L++GG+ QL L Sbjct 262 IMRALFESKTPSALILTPTRELAIQIERQAKELMSGL--PRMKTVLLVGGLPLPPQLYRL 319 Query 337 ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 + V +++ TPGRL D++ + L V+ +V+DEAD +L G+ + + IP Sbjct 320 QQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPN--- 376 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP-DTVHHVVVPVN--PKTD 453 Q I+ SAT+ + +++L+ +++H P + + GE ++P V +++ V K Sbjct 377 ---DCQTILVSATIPT-SIEQLASQLLHNPVRI-ITGEKNLPCANVRQIILWVEDPAKKK 431 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 +L+E L + V + + GA+ + SEA++ + G Sbjct 432 KLFEILNDKKLFKPPVLVFVDCKLGAD---LLSEAVQKITG------------------- 469 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 + +H ++ ERK L+ +GD ++ T Sbjct 470 --------------------------LKSISIHSEKSQIERKNILKGLLEGDYEVVVSTG 503 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V RG+D+ V V+N +P YVH+IGRVGR + G AI+ + +++++ + Sbjct 504 VLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSKRLFWDI 560 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 37/53 (70%), Gaps = 1/53 (2%) Query 10 MPEIA-QAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +PE+ +++ + +PT IQ + IP+ L G D+L +A+TGSGKT AF +PVI Sbjct 210 LPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262 >sp|Q4I830|DRS1_GIBZE ATP-dependent RNA helicase DRS1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DRS1 PE=3 SV=1 Length=796 Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/340 (28%), Positives = 153/340 (45%), Gaps = 57/340 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +++ P+RELA Q + + D ++ L +GG++ + Q L+ D+++ TP Sbjct 329 RVVVLLPTRELAIQCHAVATKLAAFTD---IKFTLAVGGLSLKAQELELKLRPDVIIATP 385 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ ++ V LVLDEAD +L G++D +N + +P K Q ++ Sbjct 386 GRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADELNEILTTLP------KSRQTMLF 439 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ S V +L + ++ P V + + T+ V + P Sbjct 440 SATMTS-SVDRLIQIGLNRPARVMVNSQKKTVTTLVQEFVRLRP---------------- 482 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +++ R G Y K ++ IIF R K D F Sbjct 483 ----GREDKRMG-----------------YLAHVCKNLYKERVIIFFRQKKDAHRARIIF 521 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G SC LHG +R ++E F+ G V +L+ TD+A+RG+DI GV Sbjct 522 GLLG---------LSCAELHGSMNQTQRISSVEDFRDGKVAYLLATDLASRGLDIKGVDT 572 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN P YVHR+GR RA R G+A+++ A KV Sbjct 573 VINYEAPQSLDIYVHRVGRTARAGRKGVALTIAAESDRKV 612 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F M + I + + + + PT IQA+SIP+ L G DV+ AETGSGKTGAF +P++ Sbjct 256 SSFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPIL 315 Query 62 Q 62 + Sbjct 316 E 316 >sp|Q75BL8|IF4A_EREGS ATP-dependent RNA helicase eIF4A OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=TIF1 PE=3 SV=1 Length=396 Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/335 (29%), Positives = 153/335 (46%), Gaps = 58/335 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ALI+ P+RELA Q + ++D ++ IGG R+ L G IVVG Sbjct 90 APQALILAPTRELALQIQKVVMALALHMD---VKVHACIGGTDPREDAEALRAGAQIVVG 146 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ ++ +LDEAD +LS G+ + I ++ +P T QV++ Sbjct 147 TPGRVFDMIERRNFKTDHIKMFILDEADEMLSSGFKEQIYKIFTMLPPTT------QVVL 200 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ +V +++K M+ P + +K + + + + V Sbjct 201 LSATMPK-EVLDVTDKFMNKPVRILVKKDALTLEGIQQYYINVE---------------- 243 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 S E + + L +V QA+IFC T+ + L + Sbjct 244 ---------------SEEYKYDCLSDLYDSISVT--------QAVIFCNTRRKVEELTKR 280 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F+ ++ D +R ++ F+ G R LI TD+ ARGID+ V Sbjct 281 LTDDS---------FTVSAIYSDLPQAQRDTIMKEFRTGSSRILISTDLLARGIDVQQVS 331 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 VIN LP+ K+NY+HRIGR GR R G+AI+LV Sbjct 332 LVINYDLPNNKENYIHRIGRGGRFGRKGVAINLVT 366 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/69 (35%), Positives = 41/69 (59%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+ + + + + ++ P+ IQ +I I+ G DVL A++G+GKTG FSI +Q Sbjct 24 FDELKLKEVLLRGIYGYGFVDPSAIQQRAILPIIEGHDVLAQAQSGTGKTGTFSIAALQR 83 Query 64 VYETLKDQQ 72 + E++K Q Sbjct 84 IDESIKAPQ 92 >sp|Q0CZN5|DRS1_ASPTN ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=drs1 PE=3 SV=1 Length=821 Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 98/353 (28%), Positives = 158/353 (45%), Gaps = 58/353 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + I+ P+RELA Q N + Y D + ++GG + R+Q ++L+ D+++ TP Sbjct 377 RVAILMPTRELAVQCYNVATKLATYTD---ITFCQLVGGFSLREQENILKKRPDVIIATP 433 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + + LVLDEAD +L G++D +N + IP K Q ++ Sbjct 434 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIP------KSRQTMLF 487 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ V KL ++ P + + + + T+ V + P R +RLG Sbjct 488 SATMTDT-VDKLIRVGLNRPVRLMVDSKKNTSLTLVQEFVRLRPG--REDKRLG------ 538 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 Y + KE + I+F R K + + F Sbjct 539 -----------------------------YLLYLCKEIYTGRVIVFFRQKREAHRVRIVF 569 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G LHG +R +++E F+ G V FL+ TD+A+RG+DI GV Sbjct 570 GLLG---------LKAAELHGSMSQEQRIKSVENFRDGKVAFLLATDLASRGLDIKGVET 620 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW-YHVCSSRGKGC 638 VIN P + Y+HR+GR RA R G A ++ A KV V +S+ +G Sbjct 621 VINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASKAQGA 673 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 39/60 (65%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P+++ Sbjct 305 SFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 364 >sp|Q2GQ93|DHH1_CHAGB ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DHH1 PE=3 SV=1 Length=512 Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/367 (27%), Positives = 162/367 (44%), Gaps = 67/367 (18%) Query 264 GYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 +++ + N +V++ + LI+ P+RELA QT K K++ + ++ Sbjct 64 AFVIPALEKINPKVSKIQ-------CLILVPTRELAMQTSQVCKTLGKHLG---INVMVT 113 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG RD + L++ V IVVGTPGR+ DL +LS+ ++DEAD LLS ++ Sbjct 114 TGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLLSIEFTPV 173 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 I ++ P K QV++ SAT VK S+K M P ++L Sbjct 174 IEQLLRFHP------KDRQVMLFSATF-PISVKDFSDKNMTSPYEINL------------ 214 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 D++ + T+ A E + + L ++ + Sbjct 215 ----------------------MDELTLRGITQYYAYVEE--KQKVHCLNTLFS-----K 245 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 +++Q+IIFC + + L + + G +SC H R + F+ Sbjct 246 LQINQSIIFCNSTNRVELLAKKITELG---------YSCFYSHAKMAQQARNRVFHDFRN 296 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Sbjct 297 GVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDD 356 Query 624 EKVWYHV 630 Y++ Sbjct 357 RFNLYNI 363 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + G+ ++ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 13 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALE 71 >sp|Q1E2B2|DRS1_COCIM ATP-dependent RNA helicase DRS1 OS=Coccidioides immitis (strain RS) OX=246410 GN=DRS1 PE=3 SV=1 Length=840 Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 107/383 (28%), Positives = 171/383 (45%), Gaps = 60/383 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + I+ P+RELA Q N + Y D + ++GG + R+Q +VL+ D+++ TP Sbjct 392 RVAILMPTRELAVQCYNVATKLATYTD---ITFCQLVGGFSLREQENVLKQRPDVIIATP 448 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + + LVLDEAD +L G++D +N + N IP K Q ++ Sbjct 449 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILNTIP------KSRQTMLF 502 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + V KL ++ P + + D+ H V + + RL Sbjct 503 SATM-TDSVDKLIRVGLNRPVRL-------MVDSKKHTVGTLVQEFVRL----------- 543 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 RPG M Y V ++ I+F R K + F Sbjct 544 ---------RPGREGKRMG----------YLVLLCNTIYTNRVIVFFRQKKEAHRARIIF 584 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G LHG +R +E F+ G V FL+ TD+A+RG+DI GV Sbjct 585 GLLG---------LKAAELHGSMSQEQRINAVEAFRDGKVPFLLATDLASRGLDIKGVES 635 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW-YHVCSSRGKGC-YNTRLK 644 VIN P + Y+HR+GR RA R G A ++ A KV V + R +G +R+ Sbjct 636 VINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKAGRAQGAKIVSRVV 695 Query 645 EDGGCTIWYNEM-QLLSEIEEHL 666 + W +++ ++ +EIE+ L Sbjct 696 DPAVADEWASKVEEMQAEIEDIL 718 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/69 (35%), Positives = 40/69 (58%), Gaps = 1/69 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + I + + + + PT IQ ++IP+ L G D++ A TGSGKT AF IP++ Sbjct 319 STFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLGKDLVGGAVTGSGKTAAFIIPIL 378 Query 62 Q-IVYETLK 69 + ++Y K Sbjct 379 ERLLYRPRK 387 >sp|Q59W52|PRP28_CANAL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PRP28 PE=3 SV=2 Length=581 Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 99/356 (28%), Positives = 174/356 (49%), Gaps = 56/356 (16%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-ENGVD 341 + N P LI+ P+RELA Q ++F K + + L IIGG +D ++ + + GV Sbjct 243 ISNEPVGLILAPTRELALQITKEAEKFCKKLG---YQVLPIIGGHHYQDTINKIDQTGVH 299 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP---QVTS-- 396 ++V TPGRL D + ++LS+ LV+DEAD ++ G+ +N++ +++P Q++S Sbjct 300 LIVATPGRLVDSIERKIVDLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPTEKQLSSTI 359 Query 397 DGK-----RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 DG+ + ++ +AT+ S V+KL++K + P ++ + G D + Sbjct 360 DGRIFHLEKRSTMMFTATI-SPTVEKLTKKYLIDPGYLYIGGAGEALDNISQS------- 411 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 +E L + +++ IKI++ + V E+ + II Sbjct 412 ----FEFLSSA----------------TTEATKFNKLIKIIRSHWRV---TENPL--III 446 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F K CD+L Q + + V +HG + R+Q + F+ + LI Sbjct 447 FANFKHVCDSLSQEL---------SSNDINNVVIHGSKSQDMREQAITNFRNHESEVLIA 497 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 TDVAARGIDI V VIN + + Y+HRIGR GRA +G + + ++ + +++ Sbjct 498 TDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIF 553 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 ++E + ++ + ++ + PT +Q SIPL L DV+ AETGSGKT AF IPV+ Sbjct 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNY 229 Query 64 V 64 + Sbjct 230 I 230 >sp|A6RC50|DBP5_AJECN ATP-dependent RNA helicase DBP5 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP5 PE=3 SV=1 Length=497 Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 100/351 (28%), Positives = 162/351 (46%), Gaps = 73/351 (21%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+AL++ PSRELA Q + I+ Y+D KL+ + + R+Q + +VVG Sbjct 162 APQALVLAPSRELARQIVGVIQVMGSYVD--KLKVATAVPMESNRNQ----KVEAPVVVG 215 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPG + DL+ N ++ +VLDEAD +L QG D R+ +P K +QV+ Sbjct 216 TPGTVMDLIRKRLFNPQHLKVIVLDEADNMLDQQGLGDQCIRVKGLLP------KNIQVV 269 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT V + + K + LK E+ + + + + + Sbjct 270 LFSATFPDH-VVRYANKFAPNANQITLKHEELTVEGIKQLYLDCD--------------- 313 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 D H D IL Y + I +IIF +T+ +E+ Sbjct 314 --SDEHKFD-----------------ILVKFYGLLTI-----GSSIIFVKTRASAVEIER 349 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + +G + V L G + +R + +++F++GD + LI T+V ARGID+ V Sbjct 350 RMVAEG---------HTVVSLTGGVEGQKRDEIIDKFRQGDAKVLITTNVLARGIDVQTV 400 Query 585 PYVINVTLPD-----------EKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VIN +P+ + Q Y+HRIGR GR R+G+A+S VA+++E Sbjct 401 SMVINYDIPELHAPKATKRIADAQTYLHRIGRTGRFGRVGVAVSFVASKEE 451 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ P I Q + M + P+ IQ +++PL+L +++ +++G+GKT AF + Sbjct 88 IKSFEELGLHPSILQGLHSMSFRRPSKIQEKALPLLLNNPPANMIGQSQSGTGKTAAFVL 147 Query 59 PVI 61 ++ Sbjct 148 NIL 150 >sp|P23128|DDX6_DROME ATP-dependent RNA helicase me31b OS=Drosophila melanogaster OX=7227 GN=me31B PE=1 SV=3 Length=459 Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 90/335 (27%), Positives = 153/335 (46%), Gaps = 60/335 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA QT + K++D +R ++ GG +D + + V +++ TP Sbjct 128 QALVMVPTRELALQTSQICIELAKHLD---IRVMVTTGGTILKDDILRIYQKVQLIIATP 184 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ ++S R LVLDEAD LLS + ++ + ++P K Q+++ S Sbjct 185 GRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLP------KDPQILLFS 238 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT VK EK + P ++L E ++ + + ER Sbjct 239 ATF-PLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAF--------VQER--------Q 281 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 VH + ++S+ +++Q+IIFC + + L + Sbjct 282 KVHCLNT---------LFSKL----------------QINQSIIFCNSTQRVELLAKKIT 316 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G + C +H R + F++G R L+C+D+ RGID+ V V Sbjct 317 ELG---------YCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNVV 367 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 IN P + Y+HRIGR GR +G+AI+L+ E Sbjct 368 INFDFPRMAETYLHRIGRSGRFGHLGIAINLITYE 402 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E + E+ + E W P+ IQ +IP+ L G DVL A+ G+GKTGA+ IPV++ Sbjct 60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLE 118 >sp|Q6CT49|PRP28_KLULA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=PRP28 PE=3 SV=1 Length=539 Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 96/340 (28%), Positives = 158/340 (46%), Gaps = 55/340 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P AL++ P+RELA+Q + + K P + I+GG + + + L +G DI+V Sbjct 213 DGPLALVLAPTRELAQQIQHEGQSITKLWKRP-CNIVSIVGGHSLEEISANLRDGCDILV 271 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + + L L QV LVLDEAD ++ G+ D + + + +++ Q + Sbjct 272 ATPGRLLDCLDSHLLFLKQVNTLVLDEADKMIDFGFEDQLTTILAKTETISNR----QTM 327 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT S ++K++ + P++V + GE+S P + +V V + ++L Sbjct 328 MFTATF-SPTIEKVANGYLKKPSYVTVGGEESKP-KIKQIVRYVPDEEEKL--------- 376 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + KD P +P IIF K D L Sbjct 377 ---KILVKDFL-PNYKAP--------------------------IIIFINYKRTADWLFD 406 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + +F LHG + +R+ +L + G V LI TDVA RGIDI V Sbjct 407 KL---------REARFRATTLHGSKSQEQREHSLSLLRNGKVDILIATDVAGRGIDIPNV 457 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V+N+ P ++VHR+GR GRA + G A++ + E++ Sbjct 458 SLVVNLQFPKSFDSFVHRVGRTGRAGKTGTALTFLTEEED 497 Score = 41.2 bits (95), Expect = 0.037, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 34/58 (59%), Gaps = 2/58 (3%) Query 6 EMGVMPE--IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 E+ ++PE + ++ + PT IQ +IP ++ D + A TGSGKT AF +P++ Sbjct 140 ELKLIPEDLLNIITNDLHYNEPTSIQRSTIPNVINNRDFIGVASTGSGKTLAFLLPIL 197 >sp|P44701|SRMB_HAEIN ATP-dependent RNA helicase SrmB OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=srmB PE=3 SV=1 Length=439 Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 94/337 (28%), Positives = 145/337 (43%), Gaps = 59/337 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ L++ P+RELA Q ++ ++ L I GGVA ++ V D+V Sbjct 74 PGPPRILVLTPTRELAMQVAEQAEELAQFT---HLNIATITGGVAYQNHGDVFNTNQDLV 130 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK-RLQ 402 V TPGRL + + V L+ DEAD +L G+ ++ ++ + R Q Sbjct 131 VATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFG-------QDAEKIAAETRWRKQ 183 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL + +E++++ P VD E S R + Sbjct 184 TLLFSATLEGELLVDFAERLLNDPVKVD--AEPS---------------------RRERK 220 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 I HA N IK+L R I+ ++ + I+F R + D L Sbjct 221 KINQWYYHADSN-----------EHKIKLL-----ARFIETEEVTRGIVFIRRREDAREL 264 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + ++G L G+ +R +++ K G V L+ TDVAARGIDI Sbjct 265 SETLRKRG---------IRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVATDVAARGIDID 315 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V +V+N LP Y+HRIGR RA + G A+S V Sbjct 316 DVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFV 352 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 40/62 (65%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ F + + PE+ +A+E+ + PT IQ E+IP + DVL +A TG+GKT AF +P Sbjct 3 LSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPA 62 Query 61 IQ 62 +Q Sbjct 63 LQ 64 >sp|Q818H2|CSHB_BACCR DEAD-box ATP-dependent RNA helicase CshB OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=cshB PE=2 SV=1 Length=436 Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/330 (26%), Positives = 153/330 (46%), Gaps = 57/330 (17%) Query 290 LIVEPSRELAEQTLNNIKQFKKY-IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 +I P+RELA+Q I + K+ ++ + +IGG + + L+ IVVGTPG Sbjct 76 VITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSIEKLKKQPHIVVGTPG 135 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 R+ DLV L + + +++DEAD +L G+ ++++ ++P K LQ++V SA Sbjct 136 RIKDLVEEQALFVHKANTIIVDEADLMLDMGFIHDVDKIAARMP------KNLQMLVFSA 189 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 T+ +K +K M P + + + + H +VP K + D Sbjct 190 TIPQ-KLKPFLKKYMENPEHIHINPKQVAAGNIEHYLVP------------SKHRNKIDL 236 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 VH + + + K A++F TK D + ++ Sbjct 237 VH----------------------------KMLLQFKPYLAVVFTNTKKMADQVADGLME 268 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 +G +HGD P +RK+ +++ + + ++++ TD+AARGIDI G+ +VI Sbjct 269 RG---------LKVGRIHGDLSPRDRKKMMKQIRDLEFQYIVATDLAARGIDIQGISHVI 319 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 N P + +VHR+ R RA G+A+++ Sbjct 320 NYQPPSDLDFFVHRVARTARAGHSGIAVTI 349 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/59 (34%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F++ P + AV E+ + PT IQ + P++ G V+ ++TGSGKT A+ +P + Sbjct 5 TFTQYDFKPFLIDAVRELRFTEPTGIQQKIFPVVKKGVSVIGQSQTGSGKTHAYLLPTL 63 >sp|Q0CIQ3|RRP3_ASPTN ATP-dependent rRNA helicase rrp3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rrp3 PE=3 SV=2 Length=445 Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 96/354 (27%), Positives = 150/354 (42%), Gaps = 61/354 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P +LI+ P+RELA+Q + ++ I +R L+IGG+ Q L ++ Sbjct 94 PQQFHSLILAPTRELAQQIAHTVEALGARI---SVRCTLLIGGMDMISQAIALGKKPHVI 150 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T +L +++LVLDEAD LL + ++++ +P KR + Sbjct 151 VATPGRLLDHLENTKGFSLRTLKYLVLDEADRLLDLDFGPILDKLLRLLP------KR-K 203 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V+ L + P V + ++ + + + K Sbjct 204 TYLFSATMSS-KVESLQRASLSDPVRVSVSTKNQTASKLLQSYLFIPHK----------- 251 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 K Y V + E IIF RT + L Sbjct 252 -----------------------------FKDFYLVYLLNERAGQMGIIFTRTVHETQRL 282 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 G F + +HG R +L +F+ LI TDVAARG+DI Sbjct 283 SIMLRNLG---------FPAIPIHGQLSQSARLASLNKFRARSRNLLIATDVAARGLDIP 333 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 V YV+N LP + + Y+HR+GR RA + G+A S V + ++W + + GK Sbjct 334 AVDYVLNYDLPQDSKTYIHRVGRTARAGKSGIAFSFVTQYEVELWLRIEDALGK 387 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/69 (45%), Positives = 45/69 (65%), Gaps = 2/69 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+GV+ + +A EE+ + PT IQ IP+ L G D++ AETGSGKT AF +P++Q Sbjct 30 FRELGVIDSLCEACEELGYTAPTPIQERCIPIALEGRDLIGLAETGSGKTAAFVLPMLQA 89 Query 64 VYETLKDQQ 72 + + K QQ Sbjct 90 LMD--KPQQ 96 >sp|A3LZT3|DBP10_PICST ATP-dependent RNA helicase DBP10 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP10 PE=3 SV=2 Length=931 Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 104/351 (30%), Positives = 155/351 (44%), Gaps = 34/351 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QT +K+F K D LR +++ GG + DQ S + + DIV+ TP Sbjct 171 RAIILSPSRELALQTYKQVKEFSKGSD---LRAIVLTGGDSLEDQFSSMVSNPDIVIATP 227 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L +L+L V ++V DEAD L QG+++ +N + +P + Q ++ S Sbjct 228 GRFLHLQVEMQLDLKTVEYIVFDEADHLFEQGFAEQLNELLAVLP------PQRQSLLFS 281 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV--NPKTDRLWERLGK---- 461 ATL V ++ + P V L + + D + N + L L + Sbjct 282 ATLPRSLV-DFAKAGLSNPVLVRLDADSKISDQLQMAFFTTKKNEREANLLYVLQEVIKM 340 Query 462 --------SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 +R D D E S+ K E A I+F Sbjct 341 PLGTAEQIKKLRLMDKRVNDEAEEEELENESGSKRKYKFKKERLPSANVLPSPHSTIVFV 400 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 TK + + G + ++G H RK L +F+ G L+ TD Sbjct 401 PTKHHVEYITTLLRDAG---------YLVSYIYGTLDQHARKNQLYQFRLGMTTVLVVTD 451 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VAARGIDI + V+N TLP + ++HR+GR RA G A S+V EKE Sbjct 452 VAARGIDIPVLANVVNYTLPGSSKIFIHRVGRTARAGNKGWAYSIV-NEKE 501 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F G+ + + + + PT IQ ++IPLI+ DV+ A TGSGKT AF++PVI+ Sbjct 100 SFQSFGLSKLVLTNIAKKGYRQPTPIQRKTIPLIMANRDVVGMARTGSGKTAAFTLPVIE 159 >sp|A6RJA2|PRP28_BOTFB Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=prp28 PE=3 SV=1 Length=783 Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 94/365 (26%), Positives = 160/365 (44%), Gaps = 70/365 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+I+ P+RELA+Q K+F + + I+GG + +Q L NG +I++ Sbjct 455 DGPYAIILAPTRELAQQIEVEAKKFATPLG---FTCVSIVGGHSLEEQSYNLRNGAEIII 511 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV-----TSDG- 398 TPGRL D + L L Q ++++DEAD ++ G+ + +N++ + +P T D Sbjct 512 ATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAE 571 Query 399 -------------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + Q ++ +AT+ V+K+++K + P V + +TV Sbjct 572 DAQAMSRHLGGKDRYRQTMMYTATMPPA-VEKIAKKYLRRPAIVTIGNIGEAVETVEQ-- 628 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 R + V +D + N + GE+A Sbjct 629 -------------------RVEFVAGEDKRKKRLNE--------ILASGEFA-------- 653 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 I+F K +CD + + D K F+ V LHG + +R+ L + G Sbjct 654 -PPIIVFVNIKRNCDAVAR---------DIKHMGFTSVTLHGSKTQEQREAALASVRSGA 703 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TD+A RGID+ V V+N + ++Y HRIGR GRA + G+AI+ + E Sbjct 704 TNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDSD 763 Query 626 VWYHV 630 Y + Sbjct 764 TMYDL 768 Score = 40.8 bits (94), Expect = 0.054, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M +SE + + + ++ + P+ +Q +IP+ L D++ A TGSGKT AF +P+ Sbjct 379 MRNWSESKLPKRLLDVIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPL 438 Query 61 IQIVYE 66 + + E Sbjct 439 LVYISE 444 >sp|Q8TDD1|DDX54_HUMAN ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2 Length=881 Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 97/336 (29%), Positives = 150/336 (45%), Gaps = 57/336 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA QTL K+ K+ L+ LI+GG DQ + L DI++ TP Sbjct 168 RALILSPTRELALQTLKFTKELGKFTG---LKTALILGGDRMEDQFAALHENPDIIIATP 224 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL + L L V ++V DEAD L G+++ + + ++P Q ++ S Sbjct 225 GRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPGGH------QTVLFS 278 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL V+ + + P + L + + + + V T K+ + Sbjct 279 ATLPKLLVE-FARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDT--------KAAVLLH 329 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 +H + RP DQ ++F TK + L + Sbjct 330 LLH--NVVRP----------------------------QDQTVVFVATKHHAEYLTELLT 359 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q + SC ++ P RK NL +F G LI TD+AARG+DI + V Sbjct 360 TQ---------RVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNV 410 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 IN + P + + ++HR+GRV RA R G A SLVA ++ Sbjct 411 INYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDE 446 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + + + + + +PT IQ ++IP+IL G DV+ A TGSGKT F +P+ + Sbjct 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFE 156 >sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 PE=1 SV=2 Length=760 Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 103/352 (29%), Positives = 154/352 (44%), Gaps = 66/352 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +I P+RELA Q K+F K LR + GG++ +Q L+ G +IVV T Sbjct 302 PIGVICAPTRELAHQIFLEAKKFSKAY---GLRVSAVYGGMSKHEQFKELKAGCEIVVAT 358 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D++ L + + +LVLDEAD + G+ + + QI Q ++ Sbjct 359 PGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQI------RPDRQTLLF 412 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP----KTDRLWERLGKS 462 SAT+ + V+KL+ +I+ P V + GE + + VV V P K L E+L Sbjct 413 SATM-PWKVEKLAREILSDPIRVTV-GEVGMANEDITQVVNVIPSDAEKLPWLLEKL--- 467 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 P M E ++F K D + Sbjct 468 -------------------PGMIDEG-------------------DVLVFASKKATVDEI 489 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 E + F LHGD+ R + L++FK G LI TDVAARG+DI Sbjct 490 EAQLTL---------NSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIK 540 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRA-ERMGLAISLVATEKEKVWYHVCSS 633 + V+N + + +VHRIGR GRA +R G+A +LV + + + +S Sbjct 541 SLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNS 592 Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + G +I A+++ + PT IQ +++P++L G DV+ A+TGSGKT AF +P+I Sbjct 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMI 287 >sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp10 PE=3 SV=1 Length=932 Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 101/342 (30%), Positives = 153/342 (45%), Gaps = 35/342 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ PSRELA QTL +K+ K D L+ +L++GG + +Q S++ DIV+ TP Sbjct 162 RGLILSPSRELALQTLKVVKELGKGTD---LKAVLLVGGDSLEEQFSMMAGNPDIVIATP 218 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS +R++V DEAD L G++ + + + +P Q ++ S Sbjct 219 GRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPSTR------QTLLFS 272 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL V + + + PT V L E + + + V + ++ G Sbjct 273 ATLPKSLV-EFARAGLQEPTLVRLDTESKISPDLQNAFFSV-----KSGDKEGALMYILH 326 Query 468 DVHAKDNTRPGANSPEMWSE----------AIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 +V K T P + M E + + A+ + IIF TK Sbjct 327 NV-IKMPTGPTEAAQRMKEENASGKSSKFSKKRKRSDDKAINFKESPTKHSTIIFAATKH 385 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + G F+ +G RK + F+ G L+ TDVAAR Sbjct 386 HVDYLYSLLNEAG---------FATSYAYGSLDQTARKIQVHNFRTGISNILVVTDVAAR 436 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 GIDI + VIN P + + +VHR+GR RA R G + SLV Sbjct 437 GIDIPILANVINYDFPSQAKIFVHRVGRTARAGRTGWSYSLV 478 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+IQ Sbjct 92 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIQ 150 >sp|A6RY31|DHH1_BOTFB ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dhh1 PE=3 SV=1 Length=538 Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 153/343 (45%), Gaps = 60/343 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ P+RELA QT K +++ + ++ GG RD + L+ V I+VGTP Sbjct 117 QCLILVPTRELALQTSQVCKTLGQHLG---INVMVTTGGTTLRDDILRLQEPVHIIVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL +LS+ V+DEAD LLS ++ I ++ P K Q+++ S Sbjct 174 GRILDLAGKNVADLSECNMFVMDEADKLLSPEFTIVIEQLLQFHP------KDRQIMLFS 227 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT VK S+K M P ++L D Sbjct 228 ATF-PMTVKDFSDKNMADPYEINL----------------------------------MD 252 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 ++ + T+ A E E + L ++ + +++Q+IIFC + + L + Sbjct 253 ELTLRGITQFYAFVEE--KEKVHCLNTLFS-----KLQINQSIIFCNSTNRVELLAKKIT 305 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G +SC H R + F+ G R L+C+D+ RGIDI V V Sbjct 306 ELG---------YSCFYSHARMIQANRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVV 356 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 IN P + Y+HRIGR GR +GLAI+L++ E Y++ Sbjct 357 INFDFPKNAETYLHRIGRSGRFGHLGLAINLISWEDRFNLYNI 399 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + EM + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFSIKRELLMGIFEMGYEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 108 Query 64 V 64 + Sbjct 109 I 109 >sp|Q6CH58|RRP3_YARLI ATP-dependent rRNA helicase RRP3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=RRP3 PE=3 SV=1 Length=480 Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 97/354 (27%), Positives = 151/354 (43%), Gaps = 60/354 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P +++ P+RELA Q + + LR +++GG+ Q L ++ Sbjct 130 PQPLYCVVLAPTRELAYQISETFEALGSAMG---LRTAVVVGGMNMMTQAVALSKKPHVI 186 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T +L ++FLV+DEAD LL + ++++ IP ++ Sbjct 187 VATPGRLVDHLENTKGFSLRTLKFLVMDEADRLLDMEFGPSLDKILKVIP------RQRN 240 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V+KL S+ D V V D L + + Sbjct 241 TYLFSATMTS-KVEKLQRA--------------SLVDPVRVAVSTKYQTADNLLQYMVFC 285 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + D H V + E+ + IIF RTK D + Sbjct 286 PFKHKDTHL--------------------------VYLVSENAGNSMIIFARTKSDTQRI 319 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 G G + LHGD R L +FK G LI TDVA+RG+DI Sbjct 320 SLLLRNLGYG---------AIPLHGDLSQTARLGALNKFKSGSRNILIATDVASRGLDIP 370 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 V VIN +P + ++Y+HR+GR RA R G +++LV+ +++ + + GK Sbjct 371 AVDLVINYDIPSDSKSYIHRVGRTARAGRAGKSVALVSQYDLELYLRIEGALGK 424 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 32/63 (51%), Positives = 45/63 (71%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++GV+ I + EE+ + PT IQA+SIP L G D++ A+TGSGKT AF+IPV+Q Sbjct 66 FKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVLQS 125 Query 64 VYE 66 +YE Sbjct 126 LYE 128 >sp|Q4P9P3|DRS1_USTMA ATP-dependent RNA helicase DRS1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DRS1 PE=3 SV=1 Length=932 Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 103/340 (30%), Positives = 157/340 (46%), Gaps = 42/340 (12%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ P+RELA Q + K K+ D +R L +GG++ + Q + L+ ++V+ TP Sbjct 410 RVLILAPTRELAIQCYSVGKSIAKFTD---IRFCLCVGGLSVKSQEAELKLRPEVVIATP 466 Query 348 GRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GRL D V ++ L + LV+DEAD +L G++D +N + P+ G R Q ++ Sbjct 467 GRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELNEIVKSCPK----GAR-QTMLF 521 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + DV++L + P V V P +L + + Sbjct 522 SATM-TDDVEQLVRLSLKRP--------------VRLFVDPKRTTAKKLIQEFVRVRGTG 566 Query 467 DDVHAKDNTRPG-ANSPEMWSEAIKILKGEYAVRAI------KEHKMDQAIIFCRTKIDC 519 A + G + P W + K E A R Q +IF R+K Sbjct 567 TGGVAGADGLSGIQDQPATWISGGR--KSEDAQRPALLLSLCTRTFTSQTMIFVRSKKLA 624 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 L+ F G S LHGD +R L F+ G FL+ TD+A+RG+ Sbjct 625 HQLKIVFGLLG---------LSAGELHGDLSQEQRIDALTDFRDGKTDFLLATDLASRGL 675 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 DI GV VIN +P + + Y+HR+GR RA R G A++LV Sbjct 676 DIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLV 715 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F + + +A+ + + PT IQ+ +IP+ L G D++ A TGSGKT AF IP I Sbjct 333 SSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTI 392 Query 62 Q 62 + Sbjct 393 E 393 >sp|Q65RG7|RHLB_MANSM ATP-dependent RNA helicase RhlB OS=Mannheimia succiniciproducens (strain MBEL55E) OX=221988 GN=rhlB PE=3 SV=1 Length=417 Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 111/358 (31%), Positives = 170/358 (47%), Gaps = 65/358 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ ++ K L+ L GG QL +E G DI++ Sbjct 79 NHPRALIMAPTRELAVQIAHDAERMVK---TTGLKTALAYGGDGYDKQLKAIEAGADIII 135 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GR+ D V + LS ++ +VLDEAD + G+ I + + P S +RL + Sbjct 136 GTTGRIIDYVKQNIIALSHIQVVVLDEADRMFDLGFIKDIRYLMRKCP---SPKQRL-TL 191 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SATL S+ V++L+ + M+ P +V+ V P+ R+ E L Sbjct 192 LFSATL-SYKVRELAFEDMNDPEYVE--------------VEPLQKTGHRIKEELFYP-- 234 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +N +M I +L+ E+ R I IF TK C+ + Sbjct 235 --------------SNEDKM-PLLITLLEEEWPERCI---------IFANTKHQCEKIWG 270 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Y G H+ L GD +R L++F G + L+ TDVAARG+ I V Sbjct 271 YLAADG-------HRVGL--LTGDVAQKKRLSLLKQFTDGALDILVATDVAARGLHIPDV 321 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE--------KEKVWYHVCSSR 634 +V N LPD++++YVHRIGR GRA G++IS E +E + +H+ S+ Sbjct 322 THVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEEYAMNLPAIEEYIGHHIAVSQ 379 Score = 41.2 bits (95), Expect = 0.034, Method: Compositional matrix adjust. Identities = 21/53 (40%), Positives = 34/53 (64%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F+++ + ++ +A+E + T IQA S+P+ L G DV A+TG+GKT AF Sbjct 11 FADLPLNAKVLEALESNGFEYCTPIQALSLPISLAGKDVAGQAQTGTGKTMAF 63 >sp|A2RB17|RRP3_ASPNC ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=rrp3 PE=3 SV=1 Length=467 Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 102/348 (29%), Positives = 152/348 (44%), Gaps = 59/348 (17%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q K F+ + +R +I+GG+ Q L I+V TPGR Sbjct 120 LVLAPTRELAYQI---SKSFESLGASMGVRSCVIVGGMDMVSQSISLGKKPHIIVATPGR 176 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L D L +T +L +++LV+DEAD LL + ++++ +P + + + SA Sbjct 177 LLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLLDKILKVLP------RERRTFLFSA 230 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 T+ S V+ L + P V SV + + V L +S++ Sbjct 231 TMSS-KVESLQRASLSNPLRV------SVSTSKYQTV-----------STLLQSYLFIPQ 272 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 H K Y V + E IIF RT + L F+ Sbjct 273 KH----------------------KDLYLVYLLNEFAGQSTIIFTRTVNETQRLA--FLL 308 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 + G F + LHG R L +F+ L+ TDVAARG+DI V V+ Sbjct 309 RALG-------FGAIPLHGQLSQSARLGALGKFRARSRNILVATDVAARGLDIPSVDVVL 361 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 N LP + +YVHR+GR RA + GLAIS VA +VW + + GK Sbjct 362 NFDLPGDSPSYVHRVGRTARAGKSGLAISFVAQYDVEVWLRIEGALGK 409 Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+G++ ++ +A E M + PT IQ ESIPL L G D++ AETGSGKT AF++P++Q Sbjct 50 FKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPILQA 109 Query 64 VYE 66 + E Sbjct 110 LME 112 >sp|Q6FM43|PRP28_CANGA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=PRP28 PE=3 SV=1 Length=582 Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 160/343 (47%), Gaps = 57/343 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLENGVDIV 343 + P AL++ P+RELA+Q I + +N K L + I+GG + D L NG DI+ Sbjct 252 DGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDIL 311 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG-KRLQ 402 + TPGRL D++ + L++++ LVLDEAD ++ G+ D +M + + + +D Q Sbjct 312 IATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFED---QMKSILSHLMADELAARQ 368 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE-DSVPDTVHHVVVPVNPKTDRLWERLGK 461 ++ +ATL S V+ +++ + P V + DS + VV Sbjct 369 TMLFTATLSS-SVESIAKGYLKNPLHVSVGSRWDSDKPLITQVV---------------- 411 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 H DD + + LK + + AIIF K D Sbjct 412 RHTGDDD------------------KKLSFLKDDLIKNGLP------AIIFINYKETADW 447 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L +F+ V LHG + +R+ +++ K G LI T+VAARG+DI Sbjct 448 LTLRL----------SDRFNIVTLHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDI 497 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V V+N + + +Y+HRIGR GRA + G+A++ + E++ Sbjct 498 PDVALVVNFQMSKKFDDYIHRIGRTGRAGKTGIAVTYLTGEED 540 Score = 40.4 bits (93), Expect = 0.059, Method: Compositional matrix adjust. Identities = 27/65 (42%), Positives = 39/65 (60%), Gaps = 7/65 (11%) Query 4 FSEMGVMP-EIAQAVEE-MDWLLPTDIQAESIPLILGGG-----DVLMAAETGSGKTGAF 56 +SE V+P ++ +A+ E M + PT IQ +IP + D+L A TGSGKT AF Sbjct 171 WSETNVIPTDLVRALTEGMGFDEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKTLAF 230 Query 57 SIPVI 61 SIP++ Sbjct 231 SIPIL 235 >sp|Q1EB38|DBP10_COCIM ATP-dependent RNA helicase DBP10 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP10 PE=3 SV=1 Length=927 Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 102/341 (30%), Positives = 157/341 (46%), Gaps = 36/341 (11%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ PSRELA QTL +K+ + D L+ +L++GG + +Q + DI++ TP Sbjct 153 RGLILSPSRELALQTLKVVKELGRGTD---LKCVLLVGGDSLEEQFGYMAGNPDIIIATP 209 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS ++++V DEAD L G++ + + + +PQ Q ++ S Sbjct 210 GRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPQSR------QTLLFS 263 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS-HIRT 466 ATL V+ + + PT V L E + + V V + E+ G HI Sbjct 264 ATLPKSLVE-FARAGLQEPTLVRLDTESKISPDLQSVFFTV-----KSAEKEGALLHILH 317 Query 467 DDVHAKD-NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-------AIIFCRTKID 518 D + T G ++ E +AI + R+ + + Q IIF TK Sbjct 318 DVIKVPTGETEAGKHARE---QAISGKSSKKRKRSEQNNPNPQESPTEHSTIIFVATKHH 374 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D + + G F+ +G RK + F+ G L+ TDVAARG Sbjct 375 VDYIASLLRESG---------FAVSYAYGSLDQTARKIQVSNFRTGISNILVVTDVAARG 425 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 IDI + VIN P + + +VHR+GR RA R G + SLV Sbjct 426 IDIPILENVINYDFPSQAKIFVHRVGRTARAGRKGWSYSLV 466 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IPL+L DV+ A TGSGKT AF IP+I+ Sbjct 83 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIE 141 >sp|Q6BRE4|DBP5_DEBHA ATP-dependent RNA helicase DBP5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP5 PE=3 SV=1 Length=493 Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 70/347 (20%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 PN + + + P+RELA QTL I K+ K+ LI+ R Q + ++ Sbjct 172 PNT-QCICLAPARELARQTLEVITTMSKFT---KITSQLIVPDAMQRGQSTC----AHVL 223 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQ 402 VGTPG L DL+ +N S+V+ VLDEAD +L SQG D R+ +P+ T Q Sbjct 224 VGTPGTLLDLIRRKLINTSKVKVFVLDEADNMLESQGLGDQCVRVKRTLPKAT------Q 277 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 +++ SAT +V+K +EK + ++LK E+ +N E + + Sbjct 278 LVLFSATFPD-EVRKYAEKFVPNANSLELKQEE------------LN------VEGIKQL 318 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 ++ D + K ++L Y + I +IIF +TK D N+ Sbjct 319 YMDCDSANHK----------------FEVLSELYGLLTI-----GSSIIFVKTK-DTANI 356 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 ++ K+GH+ C LH + ER + ++ F++G + LI T+V ARGIDI Sbjct 357 LYAKMK------KEGHK--CSILHAGLETSERDRLIDDFREGRSKVLITTNVLARGIDIA 408 Query 583 GVPYVINVTLP-DEK-----QNYVHRIGRVGRAERMGLAISLVATEK 623 V V+N LP D+K Y+HRIGR GR R+G++IS V +K Sbjct 409 SVSMVVNYDLPVDQKGAPDPSTYLHRIGRTGRFGRVGVSISFVHDQK 455 Score = 41.6 bits (96), Expect = 0.028, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 43/67 (64%), Gaps = 2/67 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPV 60 +F E+G+ E+ + + M + P+ IQ +++PL++ +++ +++G+GKT AFS+ + Sbjct 104 SFEELGLSSELLKGLYAMKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSLTM 163 Query 61 IQIVYET 67 + V E+ Sbjct 164 LSRVDES 170 >sp|A3LQ55|PRP5_PICST Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=PRP5 PE=3 SV=2 Length=875 Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 98/345 (28%), Positives = 167/345 (48%), Gaps = 55/345 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q I F K + + GG Q++ L+ G I+VGT Sbjct 347 PIGLILSPTRELAVQIHKEITNFTKRLG---MTACCCYGGSPIESQIAELKKGAQILVGT 403 Query 347 PGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQI-PQVTSDGKRLQ 402 PGR+ +L++ +G++ NL +V ++VLDEAD + G+ + ++ +QI P+ Q Sbjct 404 PGRIIELLAANSGRITNLRRVTYVVLDEADRMFDLGFEPQVTKISSQIRPES-------Q 456 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SAT ++ L++++++ P + + G V + V L+E+ S Sbjct 457 TVLFSATFPR-KIELLAKRLLYNPLEIIVGGISVVASEITQKV--------ELFEKGESS 507 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + E + + IL V +I E K + +IF + D+L Sbjct 508 QLED----------------EKFDRLLNILN----VFSI-ESKHSKVLIFVEKQSAADDL 546 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD--VRFLICTDVAARGID 580 + G C+ +HG + +RK ++ F D V LI T +AARG+D Sbjct 547 LVKLL---------GSNHPCLTIHGGKDQIDRKYAIKEFSSKDSGVDILIATSIAARGLD 597 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + G+ VIN P+ ++YVHR+GR GRA G AI+ V++++E+ Sbjct 598 VKGLDLVINYDPPNHMEDYVHRVGRTGRAGMKGTAITFVSSDQER 642 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 7/111 (6%) Query 4 FSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +S +G+ +E+ +++ PT IQ++++P I+ G D++ A+TGSGKT +F +P+++ Sbjct 274 WSHLGLPASYMNIIEDKLEYKAPTSIQSQALPAIMSGRDIIGVAKTGSGKTLSFVLPMLR 333 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA--IGSDGLCC 111 ++DQ + K G+ I S + + + + F +G CC Sbjct 334 ----HIQDQPDLKDGEGPIGLILSPTRELAVQIHKEITNFTKRLGMTACCC 380 >sp|Q5RFQ5|DDX6_PONAB Probable ATP-dependent RNA helicase DDX6 OS=Pongo abelii OX=9601 GN=DDX6 PE=2 SV=1 Length=483 Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 94/333 (28%), Positives = 149/333 (45%), Gaps = 59/333 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+++ P+RELA Q Q K++ K+ + GG R + L++ V +V+ TP Sbjct 166 QAMVIVPTRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRGDIMRLDDTVHVVIATP 223 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ G + V+ +VLDEAD LLSQ DF+ M + I + K Q+++ S Sbjct 224 GRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTLP---KNRQILLYS 277 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+K + P ++L E ++ + + ER Sbjct 278 ATF-PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAY--------VTER--------Q 320 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 VH + ++S +++Q+IIFC + + L + Sbjct 321 KVHCLNT---------LFSRL----------------QINQSIIFCNSSQRVELLAKKIS 355 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q G +SC +H + R + F+ G R L+CTD+ RGIDI V V Sbjct 356 QLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVV 406 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN P + Y+HRIG GR +GLAI+L+ Sbjct 407 INFDFPKLAETYLHRIGGSGRFGHLGLAINLIT 439 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE 156 >sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2 Length=621 Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 96/350 (27%), Positives = 160/350 (46%), Gaps = 67/350 (19%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 K P P+ +++ P+REL+EQ K + + R +L+ GG R Q L N + Sbjct 184 KTKPRRPRTVVLCPTRELSEQVYRVAKSISHHA---RFRSILVSGGSRIRPQEDSLNNAI 240 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ--VTSDG 398 D+VVGTPGR+ + G + + +LVLDEAD + +G+ I + + Q + ++ Sbjct 241 DMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTND 300 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + Q ++ +AT+ + V+KL ++ E Sbjct 301 QGFQTVLVTATM-TMAVQKLVDE-----------------------------------EF 324 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE------HKMDQAIIF 512 G H+RT +H K AN+ + IK+ GE + A+ + K + ++F Sbjct 325 QGIEHLRTSTLHKKI-----ANA---RHDFIKLSGGEDKLEALLQVLEPSLAKGSKVMVF 376 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK--KGDVRFLI 570 C T ++ Y + +Q S V HG+ +R +NL++FK +GD L+ Sbjct 377 CNTLNSSRAVDHYLSE---------NQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLV 427 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 CTD+AARG+D+ V +V+ P +Y+HR GR R G SLV+ Sbjct 428 CTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSLVS 476 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 2/75 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+G+ E+ A++E++ +PT+IQ IP ++ V++ + TGSGKT A+ +P++Q+ Sbjct 114 FQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIVQL 173 Query 64 VYETLKDQQEGKKGK 78 + E + GKK K Sbjct 174 MRE--DEANLGKKTK 186 >sp|Q6CXT4|IF4A_KLULA ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TIF1 PE=3 SV=1 Length=396 Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 95/335 (28%), Positives = 156/335 (47%), Gaps = 58/335 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ LI+ P+RELA Q + ++D ++ IGG + ++ L G I+VG Sbjct 90 APQGLILAPTRELALQIQKVVMALAIHMD---VKVHACIGGTSLQEDSEALRGGAQIIVG 146 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D++ ++ +LDEAD +LS G+ + I + +P + QV++ Sbjct 147 TPGRVFDMIDRRIFKTDNIKMFILDEADEMLSTGFKEQIYNIFTMLPPTS------QVVL 200 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M P + +K K + E +G+ ++ Sbjct 201 LSATMPG-DVLEVTSKFMKDPVRILVK------------------KDELTLEGIGQYYVN 241 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 ++ K + + L +V QA+IFC T+ + L + Sbjct 242 VEEEQYK-------------YDCLTDLYDSISVT--------QAVIFCNTRRKVEELTER 280 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + + F+ ++ D + ER ++ F+ G R LI TD+ ARGID+ V Sbjct 281 L---------RENNFTVSAIYSDLQQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVS 331 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 VIN LP K+NY+HRIGR GR R G+AI+ V Sbjct 332 LVINYDLPSNKENYIHRIGRGGRFGRKGIAINFVT 366 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++ + E+ + + ++ P+ IQ +I I+ G DVL A++G+GKTG FSI +Q Sbjct 23 SFDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQ 82 Query 63 IVYETLKDQQ 72 + E +K Q Sbjct 83 NIDEKIKAPQ 92 >sp|Q15N18|RHLB_PSEA6 ATP-dependent RNA helicase RhlB OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=3042615 GN=rhlB PE=3 SV=1 Length=421 Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 104/333 (31%), Positives = 163/333 (49%), Gaps = 57/333 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I+ P+RELA Q N+ + ++ L LI GG + Q LE GVDI++GT Sbjct 82 PRAIIMAPTRELAVQIFNDAELLSQHTG---LSLGLIYGGEGYQSQREKLEEGVDIIIGT 138 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR+ D +L+ ++ VLDEAD + G+ I + N++P+ T +RL ++ Sbjct 139 TGRIIDYYKQNIFSLAGIQVAVLDEADRMFDLGFIKDIRYLFNRMPKPT---ERLSMLF- 194 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S+ V++L+ + M PT V V P ER + I+ Sbjct 195 SATL-SYRVQELAYEHMDNPTHVQ-----------------VEP------ERKTGTRIKE 230 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + + D + + + +++ E+ D+AI+F TK C+ + + Sbjct 231 ELFYPSDEDK--------MALLLSLMEEEWP---------DKAIVFANTKHSCEKVADWL 273 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 GH+ L GD ++R + LE F G + L+ TDVAARG+ I V + Sbjct 274 -------QADGHRVGL--LSGDVPQNKRLKILEDFTSGKLDILVATDVAARGLHIPMVSH 324 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V N LPD+ ++YVHRIGR GRA + G +IS Sbjct 325 VFNYDLPDDAEDYVHRIGRTGRAGQSGSSISFA 357 Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust. Identities = 24/78 (31%), Positives = 43/78 (55%), Gaps = 3/78 (4%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + ++ +A+ ++ T IQA S+P +L G D+ A+TG+GKT AF ++ Sbjct 11 FADLPINEQVVKALSAANFSHCTPIQALSLPPLLEGNDIAGQAQTGTGKTIAF---LVAT 67 Query 64 VYETLKDQQEGKKGKTTI 81 + L + Q KK I Sbjct 68 FHYLLSNPQPTKKQPRAI 85 >sp|A1D6X9|DBP8_NEOFI ATP-dependent RNA helicase dbp8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp8 PE=3 SV=1 Length=526 Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 105/341 (31%), Positives = 156/341 (46%), Gaps = 64/341 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 +++ P+RELA Q IK I P+ ++ +LI GG R Q L +V+ TPG Sbjct 168 VVLTPTRELALQIFEQIK----AISAPQSMKPVLITGGTDMRPQAIALAGRPHVVIATPG 223 Query 349 RLDDLV-STGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 RL D + S+G+ L +VR +VLDEAD LL+ G + + + + +R Q + Sbjct 224 RLADHIKSSGEDTVCGLKRVRMVVLDEADRLLASGPGSMLPDVETCLSALPPSSER-QTL 282 Query 405 VCSATLHSFDVKKL------SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + +AT+ + +V+ L + K F T + + + S+P T+ + V P T R E Sbjct 283 LFTATV-TPEVRALKNMPRSANKPPVFVTEISTENQGSIPPTLKQTYLKV-PLTHR--EA 338 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 + T+D + +RP AIIFC Sbjct 339 FLHVLLSTED----NASRP-------------------------------AIIFCNHTKT 363 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D LE+ + H+ + LH ER NL RF+ R L+ TDVA+RG Sbjct 364 ADLLERML-------RRLTHRVTS--LHSLLPQSERNANLARFRASAARILVATDVASRG 414 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +DI V VIN +P +YVHR+GR RA R G AI+LV Sbjct 415 LDIPTVSLVINYDVPRNPDDYVHRVGRTARAGRSGEAITLV 455 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AFS+P++ Sbjct 96 SSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPML 155 Query 62 Q 62 Q Sbjct 156 Q 156 >sp|Q4PDT1|DBP3_USTMA ATP-dependent RNA helicase DBP3 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP3 PE=3 SV=1 Length=585 Score = 119 bits (298), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 99/316 (31%), Positives = 154/316 (49%), Gaps = 52/316 (16%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG--VDIVVGTP 347 L++ P+RELA QT N+ + K + + + + GGV+ ++Q+ +L V IVVGTP Sbjct 243 LVIAPTRELAIQTEENMAKLGKSMG---IGMICLYGGVSKQEQVRLLNQSPPVRIVVGTP 299 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D+ G L+LS V +LVLDEAD +L +G+ I + I S + + S Sbjct 300 GRVLDMARDGSLDLSGVTYLVLDEADRMLDKGFEPDIRAI---IGMCKSREEGRHTSMFS 356 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V+ L+E M+ P V + ++ + N + ++ E L Sbjct 357 ATWPPA-VRGLAESFMNGPVRVTVGSDE----------LSANRRVEQTVEVLA------- 398 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 D +AK+ L+ A R+ D+ +IF K + +EQ + Sbjct 399 DGYAKER------------RLNDFLRSVNAQRS-----KDKILIFALYKKEAQRIEQT-L 440 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 ++GG F +HGD +ER +LERFK + L+ TDVAARG+DI V +V Sbjct 441 RRGG--------FKVSGIHGDLGQNERIASLERFKSAETPLLVATDVAARGLDIPNVEHV 492 Query 588 INVTLPDEKQNYVHRI 603 +N T P ++YVHRI Sbjct 493 VNYTFPLTIEDYVHRI 508 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 41/78 (53%), Gaps = 2/78 (3%) Query 1 MAAFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 M F E+ V + + ++ + PT IQA P++L DV+ AETGSGKT AF + Sbjct 156 MVDFRELDGKVDAAVKKTLDSQGFSTPTPIQACCWPVLLQNKDVVGIAETGSGKTFAFGL 215 Query 59 PVIQIVYETLKDQQEGKK 76 P +Q + K GKK Sbjct 216 PALQHLVTKHKVLDSGKK 233 >sp|P23394|PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PRP28 PE=1 SV=2 Length=588 Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 150/344 (44%), Gaps = 52/344 (15%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYID---NPKLRELLIIGGVAARDQLSVLENGVD 341 + PKALI+ P+REL +Q ++ K N + + I+GG + + L G D Sbjct 253 DGPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCD 312 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 I+V TPGRL D + L + QV LVLDEAD ++ G+ D + + ++ Sbjct 313 ILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNR 372 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 Q ++ +AT+ ++K++ M P + + E + VV + D+ Sbjct 373 QTLMFTATMTPV-IEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKF------ 425 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + +K + +Y IIF K D Sbjct 426 -------------------------KKLKPIVAKYD---------PPIIIFINYKQTADW 451 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + F +K LHG + +R+ +L+ F+ V+ +I T+VAARG+DI Sbjct 452 LAEKF--------QKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDI 503 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V V+N + + +Y+HRIGR GRA G A+S V+ +++ Sbjct 504 PNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDE 547 Score = 37.0 bits (84), Expect = 0.72, Method: Compositional matrix adjust. Identities = 22/63 (35%), Positives = 35/63 (56%), Gaps = 5/63 (8%) Query 4 FSEMGVMPE--IAQAVEEMDWLLPTDIQAESIPLILGGG---DVLMAAETGSGKTGAFSI 58 + E+ ++P + ++E+ + PT IQ +IP + D L A TGSGKT AF I Sbjct 174 WEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVI 233 Query 59 PVI 61 P++ Sbjct 234 PIL 236 >sp|A3LNL1|PRP28_PICST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=PRP28 PE=3 SV=2 Length=482 Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 97/357 (27%), Positives = 167/357 (47%), Gaps = 57/357 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P LI+ P+RELA+Q K+ +K+ D L + IIGG + + + GV +VV Sbjct 138 NKPLGLILAPTRELAQQI---TKEAQKFGDRLGLNVVSIIGGHQYEETVHSIRTGVHVVV 194 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI----------NRMHNQIPQV 394 TPGRL D + + L + +L++DEAD ++ G+ + +R+++ I + Sbjct 195 ATPGRLVDSLERNIIGLDKCYYLIMDEADRMIDMGFEKALQSILSYVPSTDRLNSTIDSM 254 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 K+ ++ +AT+ S ++K+++ + P ++ + G D H+V + Sbjct 255 IFHIKKRITLMFTATI-SPPIEKITKNFLIKPGYLYIGGAGEALD---HIV--------Q 302 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ----AI 510 +E LG + ++D +K + + VR I++H + I Sbjct 303 NFEYLGSATGGSEDFDSK--------------------RFDKLVRIIQQHSRESRQFSII 342 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IF K CD L +++ G D V +HG + R++ + F+ + R LI Sbjct 343 IFANYKRVCD-LLSLELEKNGFRDN-------VVIHGSKTQELREKAISSFRSHESRILI 394 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 TDVAARGID+ V V+N + + YVHRIGR GRA G + + + V+ Sbjct 395 ATDVAARGIDVPNVSLVVNFQMSRKFDEYVHRIGRTGRAGNRGESYTFIDDSDSDVF 451 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/57 (47%), Positives = 38/57 (67%), Gaps = 0/57 (0%) Query 17 VEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQE 73 V+++++L PT IQ +IPL L DV+ AETGSGKT AF IP++ + T K+ E Sbjct 72 VDKLEYLEPTPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIPLLSYILNTDKNYLE 128 >sp|Q4FZF3|DDX49_MOUSE Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2 SV=1 Length=480 Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 114/404 (28%), Positives = 180/404 (45%), Gaps = 76/404 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q + K + L++ +I+GG+ Q L +V+ TPGR Sbjct 74 LVLTPTRELAYQIAEQFRVLGKPLG---LKDCIIVGGMDMVAQALELSRKPHVVIATPGR 130 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L D L S+ N+ +++FLV+DEAD LL QG +DF + + V + R Q ++ SA Sbjct 131 LADHLRSSNTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPA---RRQTLLFSA 187 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 TL +K+L + P + + + T R E+L + ++ Sbjct 188 TLTD-TLKELQGLATNEPFFWEAQA------------------TVRTVEQLDQRYLLV-- 226 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF----CRT-KIDCDNLE 523 PE +A + + V+ ++ D +II C+T +I C L Sbjct 227 -------------PEKVKDAYLV----HLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLR 269 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 ++ F V LH K ER L +FK R LI TDVA+RG+DI Sbjct 270 KF-------------NFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPT 316 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRL 643 V VIN P + Y+HR+GR RA R G AI+LV T+ + H + K + Sbjct 317 VQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLV-TQYDIHLLHAIEEQIKQQLAELV 375 Query 644 KEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 E+ +Q+L+++ + + E +IK+ FD K Sbjct 376 VEEAEV------LQILTQV------NVVRRECEIKLEASHFDEK 407 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/66 (41%), Positives = 40/66 (61%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MA F+E+G+ + + ++ PT +Q IP IL G D L A+TGSGKT AF +P+ Sbjct 1 MAGFAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60 Query 61 IQIVYE 66 +Q + E Sbjct 61 LQKLSE 66 >sp|A1CKJ0|DBP8_ASPCL ATP-dependent RNA helicase dbp8 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp8 PE=3 SV=1 Length=523 Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 103/340 (30%), Positives = 154/340 (45%), Gaps = 62/340 (18%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 LI+ P+RELA Q IK I P+ ++ +LI GG R Q L +VV TPG Sbjct 165 LILTPTRELALQIFEQIK----AISAPQSMKPVLITGGTDMRSQALALAGRPHVVVATPG 220 Query 349 RLDDLV-STGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 RL D + S+G+ L +VR +VLDEAD LLS G + + + + +R Q + Sbjct 221 RLADHIKSSGEDTVCGLKRVRMVVLDEADRLLSSGPGSMLPDVETCLSALPPSSER-QTL 279 Query 405 VCSATLHS-----FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 + +AT+ ++ + + K F T + + + +VP T+ + V P T R E Sbjct 280 LFTATVTPEVRALKNMPRAANKPPVFVTEISSESQGTVPPTLKQTYLKV-PLTHR--EAF 336 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + T+ ++T+P AIIFC Sbjct 337 LHVLLSTEG----NSTKP-------------------------------AIIFCNHTKTA 361 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D LE+ + H+ + LH ER NL RF+ R L+ TDVA+RG+ Sbjct 362 DLLERML-------RRLSHRVTS--LHSLLPQSERNANLARFRASAARILVATDVASRGL 412 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 DI V V+N +P +YVHR+GR RA R G +++LV Sbjct 413 DIPSVSLVVNYDVPRNPDDYVHRVGRTARAGRSGESVTLV 452 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++FS + V P + ++ + PT IQ IP IL G D + + TGSGKT AFS+P++ Sbjct 93 SSFSALNVAPWLVGSLTTLAVRKPTAIQKACIPEILNGKDCIGGSRTGSGKTIAFSVPML 152 Query 62 Q 62 Q Sbjct 153 Q 153 >sp|Q8K4L0|DDX54_MOUSE ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1 Length=874 Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 96/336 (29%), Positives = 154/336 (46%), Gaps = 57/336 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA QT+ K+ K+ L+ LI+GG DQ + L DI++ TP Sbjct 167 RALILSPTRELALQTMKFTKELGKFTG---LKTALILGGDKMEDQFAALHENPDIIIATP 223 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL + L L V ++V DEAD L G+++ + + ++P Q ++ S Sbjct 224 GRLVHVAVEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIGRLPGGH------QTVLFS 277 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL V + + + P + L V+ K + ++T Sbjct 278 ATLPKLLV-EFARAGLTEPVLIRLD---------------VDSKLN--------EQLKTS 313 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 + +++T+ A+ + + VR DQ ++F TK + L + + Sbjct 314 FLLVREDTK----------AAVLLYLLQNVVRP-----QDQTVVFVATKHHAEYLTELLM 358 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 QG SC ++ RK NL +F LI TD+AARG+DI + V Sbjct 359 GQG---------VSCAHIYSALDQTARKINLAKFTHNKCSTLIVTDLAARGLDIPLLDNV 409 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 IN + P + + ++HR+GRV RA R G A SLVA ++ Sbjct 410 INYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDE 445 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 12/85 (14%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + + + + + +PT IQ ++IP+IL G DV+ A TGSGKT F +P Sbjct 97 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLP---- 152 Query 64 VYETLKDQQEGKKGKTTIKTGASVL 88 ++E LK + + +TGA L Sbjct 153 MFERLKAR--------SAQTGARAL 169 >sp|Q7S9J4|DBP10_NEUCR ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-10 PE=3 SV=1 Length=934 Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 99/353 (28%), Positives = 159/353 (45%), Gaps = 66/353 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ PSRELA QTL +K+ + D L+ +L++GG + +Q ++ + DI++ TP Sbjct 171 RALIMSPSRELALQTLKVVKELGRGTD---LKTVLLVGGDSLEEQFGMMASNPDIIIATP 227 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+L+ ++++V DEAD L G++ + + + +P Q ++ S Sbjct 228 GRFLHLKVEMNLSLASIKYVVFDEADRLFEMGFATELTEILHALPPSR------QTLLFS 281 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDT-------------------VHHVV-V 446 ATL S V+ + + P+ V L E V PD +H V+ V Sbjct 282 ATLPSSLVE-FARAGLQEPSLVRLDAETKVSPDLESAFFAVKGGEKEGALLHLLHDVIKV 340 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 P+ P E +D++ A+ R +P K EY+ Sbjct 341 PLGPPEGTKEE--------SDELQARKRKREYRPNP-------KEKPTEYST-------- 377 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 IIF TK + + G F+ ++G R ++ F++G Sbjct 378 ---IIFTATKHHVEYIANLLKLAG---------FAVSYVYGSLDQTARLIQVDNFRRGRT 425 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 L+ TDVAARGID+ + VIN P + + +VHR+GR RA + G A LV Sbjct 426 HILVVTDVAARGIDMPALANVINYDFPSQPKIFVHRVGRTARAGQRGWAYGLV 478 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/59 (46%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IPLIL DV+ A TGSGKT AF IP+I+ Sbjct 101 FQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILERKDVVGMARTGSGKTAAFVIPMIE 159 >sp|Q4WCW2|SUB2_ASPFU ATP-dependent RNA helicase sub2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=sub2 PE=3 SV=1 Length=448 Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 100/358 (28%), Positives = 163/358 (46%), Gaps = 57/358 (16%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +P L++ +RELA Q N +F KY+ P ++ + GG + + VL N Sbjct 119 QLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPIQKDIEVLSN 176 Query 339 G---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ-GYSDFINRMHNQIPQV 394 +IVVGTPGRL+ LV KL+L V+ VLDE D +L Q G I M + ++ Sbjct 177 KESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQIGKQAQIAHMRRDVQEI 236 Query 395 -TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 + QV++ SATL S +++ + +K M P V + +D T+H + Sbjct 237 FRATPADKQVMMFSATL-SQEIRPICKKFMRNPLEVYV--DDDTKLTLHGL--------Q 285 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 + + +L +S K + + +Q IIF Sbjct 286 QYYIKLSESE-----------------------------KNRKLNELLDSLEFNQVIIFV 316 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 ++ + + L++ + F + +H ER + + FK+ + R + TD Sbjct 317 KSTLRANELDKLL---------RECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATD 367 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK-EKVWYHV 630 V RGIDI + IN LP + +Y+HR+GR GR GL+IS V++E+ EKV + Sbjct 368 VFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEEDEKVLKEI 425 >sp|A3LS22|RRP3_PICST ATP-dependent rRNA helicase RRP3 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=RRP3 PE=3 SV=3 Length=484 Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 101/346 (29%), Positives = 150/346 (43%), Gaps = 62/346 (18%) Query 290 LIVEPSRELAEQTLNNIKQ-FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 L++ P+RELA Q IK+ F +R + ++GG+ DQ L I++ TPG Sbjct 143 LVLAPARELAYQ----IKETFDALGSTMGVRTVCLVGGMDMMDQARDLMRKPHIIIATPG 198 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R +D L T +L +++ V+DEAD LL + ++++ QIP KR + S Sbjct 199 RIMDHLEHTKGFSLKMLKYFVMDEADKLLDLEFGPVLDKILKQIP-----SKR-TTYLFS 252 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + ++KL +H P V + + D L +S + Sbjct 253 ATMTN-KIEKLQRASLHNPVRVAVSSKYQTADN------------------LIQSMMLVS 293 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 D + K Y + + E IIF RT+ Sbjct 294 DGY----------------------KNTYLIHLLNEFVGKSIIIFARTRAHTQRTSILCR 331 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 G FS V LHGD +R +L +FK G LI TDVAARG+DI V V Sbjct 332 ILG---------FSAVPLHGDLTQAQRLGSLNKFKSGTANILIATDVAARGLDIPSVDVV 382 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 IN +P + + YVHR+GR RA R G +ISLV +++ + S Sbjct 383 INYDIPTDSKAYVHRVGRTARAGRSGKSISLVTQYDLEMYLRIEQS 428 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 30/65 (46%), Positives = 50/65 (77%), Gaps = 0/65 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + FSE+ ++PE+ +A+++M + PT IQ+E+IP L G D++ A+TGSGKT AF+IP++ Sbjct 71 STFSELKLVPELLEAIQQMKFSKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPIL 130 Query 62 QIVYE 66 Q ++E Sbjct 131 QSLWE 135 >sp|A2QAX7|DRS1_ASPNC ATP-dependent RNA helicase drs1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=drs1 PE=3 SV=1 Length=824 Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 104/384 (27%), Positives = 171/384 (45%), Gaps = 63/384 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + I+ P+RELA Q N + Y D + ++GG + R+Q ++L+ D+++ TP Sbjct 382 RVAILMPTRELAVQCYNVATKLATYTD---ITFCQLVGGFSLREQENILKKRPDVIIATP 438 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + + LVLDEAD +L G++D +N + IP K Q ++ Sbjct 439 GRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELNEILTTIP------KSRQTMLF 492 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ V KL ++ P + + + + T+ V + P R +RLG Sbjct 493 SATMTDT-VDKLIRVGLNRPVRLMVDAKKNTAVTLVQEFVRLRP--GREDKRLG------ 543 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 Y + KE + I+F R K + + F Sbjct 544 -----------------------------YLLYLCKEIYTGRVIVFFRQKKEAHRVRIIF 574 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G LHG ++Q++E F++G FL+ TD+A+RG+DI GV Sbjct 575 GLLG---------LKAAELHG---SMSQEQSVENFREGKAAFLLATDLASRGLDIKGVET 622 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW-YHVCSSRGKGC-YNTRLK 644 VIN P + Y+HR+GR RA R G A ++ A KV V + + +G +R+ Sbjct 623 VINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKAGKSQGAKIASRVI 682 Query 645 EDGGCTIWYNEM-QLLSEIEEHLN 667 E W + +L E+EE L+ Sbjct 683 EPAVADSWAAKAEELADEVEEVLS 706 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 39/60 (65%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P+++ Sbjct 310 SFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 369 >sp|Q5RKI1|IF4A2_RAT Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1 Length=407 Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/359 (30%), Positives = 166/359 (46%), Gaps = 64/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGT 346 +AL++ P+RELA+Q I Y+ IGG R+++ L+ IVVGT Sbjct 103 QALVLAPTRELAQQIQKVILALGDYMGATCHA---CIGGTNVRNEMQKLQAEAPHIVVGT 159 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ +QV++ Sbjct 160 PGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------NTSIQVVLL 213 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + DV ++++K M P + +K E+ + + + V ER Sbjct 214 SATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINV--------ER-------- 256 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E W + L Y I QA+IF T+ D L + Sbjct 257 ----------------EEWK--LDTLCDLYETLTIT-----QAVIFLNTRRKVDWLTEKM 293 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 F+ LHGD ER + F+ G R LI TD+ ARGID+ V Sbjct 294 ---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + YNT ++E Sbjct 345 VINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ETFYNTTVEE 398 Score = 37.0 bits (84), Expect = 0.70, Method: Compositional matrix adjust. Identities = 19/69 (28%), Positives = 37/69 (54%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQ 72 + K+ Q Sbjct 95 LEIEFKETQ 103 >sp|Q5R4X1|IF4A2_PONAB Eukaryotic initiation factor 4A-II OS=Pongo abelii OX=9601 GN=EIF4A2 PE=2 SV=1 Length=407 Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/359 (30%), Positives = 166/359 (46%), Gaps = 64/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGT 346 +AL++ P+RELA+Q I Y+ IGG R+++ L+ IVVGT Sbjct 103 QALVLAPTRELAQQIQKVILALGDYMGATCHA---CIGGTNVRNEMQKLQAEAPHIVVGT 159 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ +QV++ Sbjct 160 PGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------NTSIQVVLL 213 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + DV ++++K M P + +K E+ + + + V ER Sbjct 214 SATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINV--------ER-------- 256 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E W + L Y I QA+IF T+ D L + Sbjct 257 ----------------EEWK--LDTLCDLYETLTIT-----QAVIFLNTRRKVDWLTEKM 293 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 F+ LHGD ER + F+ G R LI TD+ ARGID+ V Sbjct 294 ---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + YNT ++E Sbjct 345 VINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ETFYNTTVEE 398 Score = 37.0 bits (84), Expect = 0.70, Method: Compositional matrix adjust. Identities = 19/69 (28%), Positives = 37/69 (54%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQ 72 + K+ Q Sbjct 95 LEIEFKETQ 103 >sp|P10630|IF4A2_MOUSE Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 Length=407 Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/359 (30%), Positives = 166/359 (46%), Gaps = 64/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGT 346 +AL++ P+RELA+Q I Y+ IGG R+++ L+ IVVGT Sbjct 103 QALVLAPTRELAQQIQKVILALGDYMGATCHA---CIGGTNVRNEMQKLQAEAPHIVVGT 159 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ +QV++ Sbjct 160 PGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------NTSIQVVLL 213 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + DV ++++K M P + +K E+ + + + V ER Sbjct 214 SATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINV--------ER-------- 256 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E W + L Y I QA+IF T+ D L + Sbjct 257 ----------------EEWK--LDTLCDLYETLTIT-----QAVIFLNTRRKVDWLTEKM 293 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 F+ LHGD ER + F+ G R LI TD+ ARGID+ V Sbjct 294 ---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + YNT ++E Sbjct 345 VINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ETFYNTTVEE 398 Score = 37.0 bits (84), Expect = 0.70, Method: Compositional matrix adjust. Identities = 19/69 (28%), Positives = 37/69 (54%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQ 72 + K+ Q Sbjct 95 LEIEFKETQ 103 >sp|Q14240|IF4A2_HUMAN Eukaryotic initiation factor 4A-II OS=Homo sapiens OX=9606 GN=EIF4A2 PE=1 SV=2 Length=407 Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/359 (30%), Positives = 166/359 (46%), Gaps = 64/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGT 346 +AL++ P+RELA+Q I Y+ IGG R+++ L+ IVVGT Sbjct 103 QALVLAPTRELAQQIQKVILALGDYMGATCHA---CIGGTNVRNEMQKLQAEAPHIVVGT 159 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ +QV++ Sbjct 160 PGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------NTSIQVVLL 213 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + DV ++++K M P + +K E+ + + + V ER Sbjct 214 SATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINV--------ER-------- 256 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E W + L Y I QA+IF T+ D L + Sbjct 257 ----------------EEWK--LDTLCDLYETLTIT-----QAVIFLNTRRKVDWLTEKM 293 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 F+ LHGD ER + F+ G R LI TD+ ARGID+ V Sbjct 294 ---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + YNT ++E Sbjct 345 VINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ETFYNTTVEE 398 Score = 37.0 bits (84), Expect = 0.70, Method: Compositional matrix adjust. Identities = 19/69 (28%), Positives = 37/69 (54%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQ 72 + K+ Q Sbjct 95 LEIEFKETQ 103 >sp|Q3SZ65|IF4A2_BOVIN Eukaryotic initiation factor 4A-II OS=Bos taurus OX=9913 GN=EIF4A2 PE=2 SV=1 Length=407 Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/359 (30%), Positives = 166/359 (46%), Gaps = 64/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGT 346 +AL++ P+RELA+Q I Y+ IGG R+++ L+ IVVGT Sbjct 103 QALVLAPTRELAQQIQKVILALGDYMGATCHA---CIGGTNVRNEMQKLQAEAPHIVVGT 159 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ +QV++ Sbjct 160 PGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------NTSIQVVLL 213 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + DV ++++K M P + +K E+ + + + V ER Sbjct 214 SATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINV--------ER-------- 256 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E W + L Y I QA+IF T+ D L + Sbjct 257 ----------------EEWK--LDTLCDLYETLTIT-----QAVIFLNTRRKVDWLTEKM 293 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 F+ LHGD ER + F+ G R LI TD+ ARGID+ V Sbjct 294 ---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + YNT ++E Sbjct 345 VINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ETFYNTTVEE 398 Score = 37.0 bits (84), Expect = 0.70, Method: Compositional matrix adjust. Identities = 19/69 (28%), Positives = 37/69 (54%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQ 72 + K+ Q Sbjct 95 LEIEFKETQ 103 >sp|Q8JFP1|IF4A2_CHICK Eukaryotic initiation factor 4A-II OS=Gallus gallus OX=9031 GN=EIF4A2 PE=2 SV=1 Length=407 Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 107/359 (30%), Positives = 165/359 (46%), Gaps = 64/359 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGT 346 +AL++ P+RELA+Q I Y+ IGG R+++ L+ IVVGT Sbjct 103 QALVLAPTRELAQQIQKVILALGDYMGATCHA---CIGGTNVRNEMQKLQAEAPHIVVGT 159 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ +QV++ Sbjct 160 PGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------STNIQVVLL 213 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ DV ++++K M P + +K E+ + + + V ER Sbjct 214 SATM-PMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINV--------ER-------- 256 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E W + L Y I QA+IF T+ D L + Sbjct 257 ----------------EEWK--LDTLCDLYETLTIT-----QAVIFLNTRRKVDWLTEKM 293 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 F+ LHGD ER + F+ G R LI TD+ ARGID+ V Sbjct 294 ---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 344 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + YNT ++E Sbjct 345 VINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ETFYNTTVEE 398 Score = 38.1 bits (87), Expect = 0.28, Method: Compositional matrix adjust. Identities = 20/69 (29%), Positives = 38/69 (55%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQ 72 + LK+ Q Sbjct 95 LEIDLKETQ 103 >sp|A5E058|PRP5_LODEL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=PRP5 PE=3 SV=1 Length=994 Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 160/344 (47%), Gaps = 54/344 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+RELA Q I +F +D L+ GG +Q+S L+ GV+++V T Sbjct 462 PIGLVLSPTRELALQIEKEILKFSSTMD---LKVCCCYGGSNIENQISELKRGVNVIVAT 518 Query 347 PGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGRL DL++ G++ L + F+VLDEAD + G+ I ++ QI Q Sbjct 519 PGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDK------QT 572 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT +++L++K++H P + + G V + ++ L+E Sbjct 573 VLFSATFPR-KLEQLAKKVLHNPIEIIVGGVSVVASEISQEII--------LFE------ 617 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 ++ ++ + I+ L+ + + ++F + D D L Sbjct 618 ----------------DTDQLMNHKIQKLEDILSRFFDLGKNTGKVLVFVEKQTDADKLV 661 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK--KGDVRFLICTDVAARGIDI 581 +++ C+ +HG + +RK + F + + LI T +AARG+D+ Sbjct 662 SVLLKKA---------IPCIAIHGGKDQIDRKHAIREFSDDQSGINVLIATSIAARGLDV 712 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + V+N P ++YVHR+GR GRA + G AI+ V +EK Sbjct 713 RNLDLVVNFEPPSHLEDYVHRVGRTGRAGKHGEAITFVDNTQEK 756 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 42/62 (68%), Gaps = 2/62 (3%) Query 9 VMPEIAQAVEEMD--WLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 +MPE +V + D + P+ IQ ++IP++L G D++ A+TGSGKT ++ +P+++ + + Sbjct 393 LMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQD 452 Query 67 TL 68 L Sbjct 453 QL 454 >sp|P0CQ74|DED1_CRYNJ ATP-dependent RNA helicase ded1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DED1 PE=3 SV=1 Length=637 Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 91/334 (27%), Positives = 147/334 (44%), Gaps = 58/334 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q ++ +K+ +R ++ GG Q+ L+ G D++ T Sbjct 248 PTALVLAPTRELVSQIH---EEARKFAYRSWVRPAVVYGGADIGSQMRALDRGCDLLSAT 304 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL DL+ GK++L+ V++LVLDEAD +L G+ I R+ ++ +P V Q + Sbjct 305 PGRLVDLIERGKISLANVKYLVLDEADRMLDMGFEPQIRRIVDEEDMPGVLER----QTL 360 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + + + V V ++ + +R+ ++ Sbjct 361 MFSAT---------------FPREIQNLARSFLKEYIFLTVGRVGSTSENITQRV--EYV 403 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 D + A E ++F TK D L Sbjct 404 DDQDKRSLLLDLLLA-----------------------EQSGGLILVFVETKRMADTLCD 440 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + + + +HGDR ER+ L FK G L+ T VAARG+DI V Sbjct 441 FLCSR---------RHNATSIHGDRTQREREAALYAFKSGRAPILVATAVAARGLDIPNV 491 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VI LP++ Y HRIGR GRA +G + + Sbjct 492 THVILYDLPNDVAEYTHRIGRTGRAGNVGTSTAF 525 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/62 (34%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+ + P + + V+ + PT +Q SIP++ G D++ A+TGSGKTG F P++ Sbjct 162 FTNPPINPVLLENVKYARYATPTPVQKYSIPIVADGRDLMACAQTGSGKTGGFLFPILSA 221 Query 64 VY 65 ++ Sbjct 222 LF 223 >sp|P0CQ75|DED1_CRYNB ATP-dependent RNA helicase ded1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DED1 PE=3 SV=1 Length=637 Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 91/334 (27%), Positives = 147/334 (44%), Gaps = 58/334 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q ++ +K+ +R ++ GG Q+ L+ G D++ T Sbjct 248 PTALVLAPTRELVSQIH---EEARKFAYRSWVRPAVVYGGADIGSQMRALDRGCDLLSAT 304 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ--IPQVTSDGKRLQVI 404 PGRL DL+ GK++L+ V++LVLDEAD +L G+ I R+ ++ +P V Q + Sbjct 305 PGRLVDLIERGKISLANVKYLVLDEADRMLDMGFEPQIRRIVDEEDMPGVLER----QTL 360 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FP + + + + V V ++ + +R+ ++ Sbjct 361 MFSAT---------------FPREIQNLARSFLKEYIFLTVGRVGSTSENITQRV--EYV 403 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 D + A E ++F TK D L Sbjct 404 DDQDKRSLLLDLLLA-----------------------EQSGGLILVFVETKRMADTLCD 440 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + + + + +HGDR ER+ L FK G L+ T VAARG+DI V Sbjct 441 FLCSR---------RHNATSIHGDRTQREREAALYAFKSGRAPILVATAVAARGLDIPNV 491 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +VI LP++ Y HRIGR GRA +G + + Sbjct 492 THVILYDLPNDVAEYTHRIGRTGRAGNVGTSTAF 525 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/62 (34%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+ + P + + V+ + PT +Q SIP++ G D++ A+TGSGKTG F P++ Sbjct 162 FTNPPINPVLLENVKYARYATPTPVQKYSIPIVADGRDLMACAQTGSGKTGGFLFPILSA 221 Query 64 VY 65 ++ Sbjct 222 LF 223 >sp|Q9Y7T7|PRP28_SCHPO Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp28 PE=3 SV=1 Length=662 Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 98/368 (27%), Positives = 159/368 (43%), Gaps = 66/368 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA+Q +F + + R + ++GG A +Q + G IVV T Sbjct 326 PYAVVLAPTRELAQQIQVEGNKFAEPLG---FRCVSVVGGHAFEEQSFQMSQGAHIVVAT 382 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ------------- 393 PGRL D + LSQ ++V+DEAD +L G+ D +N++ + +P Sbjct 383 PGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDVNKILSSLPSSNASEKDGSILAT 442 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 S R Q I+ SATL P V + + + V + + D Sbjct 443 ANSSSSRRQTIMFSATL---------------PPRVANLAKSYLIEPVMLTIGNIGQAVD 487 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 R+ +R+ + +DD + W +IL+ I IIF Sbjct 488 RVEQRV---EMISDD-------------SKKWRRVEEILESNRFSPPI--------IIFV 523 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 K + + + + G + V LHG + +R++ +E+ + L+ TD Sbjct 524 NLKRNIEAIAKQLNAIG---------WHAVTLHGSKSQEQRERAIEQLRNKTADILVATD 574 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY--HVC 631 +A RGIDI V V+N + ++Y HRIGR GRA + G AI+ + E V+Y V Sbjct 575 IAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVL 634 Query 632 SSRGKGCY 639 SR + Sbjct 635 LSRSAKAH 642 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 40/58 (69%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + E G+ E+ + ++++++ P+ IQ +IP++L D++ AETGSGKT AF IP+I Sbjct 251 WEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLI 308 >sp|Q0V1Z7|DRS1_PHANO ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DRS1 PE=3 SV=1 Length=808 Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 103/353 (29%), Positives = 153/353 (43%), Gaps = 58/353 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + I P+RELA Q N + + D + L+ GG ++R+Q +L+ D+V+ TP Sbjct 358 RVAIFMPTRELAVQCFNVATKLASFTD---ITFALLAGGFSSREQEVMLKTRPDVVIATP 414 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + +T + + LVLDEAD +L +G+ +N + IP K Q ++ Sbjct 415 GRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFETQLNEILTTIP------KSRQTMLF 468 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ S V KL M P + + D H V + + RL R GK R Sbjct 469 SATMTST-VDKLIRIGMDKPVRL-------MVDAKKHTVKGLTQEFIRL--RQGKEDKRL 518 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 Y + ++ ++ IIF R K + + F Sbjct 519 ----------------------------AYLMYICEKIYTERVIIFFRQKKEAHRVRVVF 550 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G LHG+ +R Q +E F+ G +L+ TDVA+RG+DI V Sbjct 551 ALCG---------LKASELHGNMSQEQRIQAVEAFRSGKSSYLLATDVASRGLDIKNVST 601 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH-VCSSRGKGC 638 VIN P + Y+HR+GR RA R G A +L A KV V SR +G Sbjct 602 VINYEAPQSHEIYLHRVGRTARAGRSGRACTLAAEPDRKVVKQAVKQSRDQGS 654 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 40/62 (65%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F M + I + + + + PT IQA++IP+ + G DV+ AETGSGKT AF IP+ Sbjct 284 IGSFHAMSLSRPIQKGLAAIGFTEPTPIQAKAIPIAMQGKDVVGGAETGSGKTAAFLIPI 343 Query 61 IQ 62 ++ Sbjct 344 LE 345 >sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio OX=7955 GN=ddx46 PE=2 SV=1 Length=1018 Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 96/338 (28%), Positives = 157/338 (46%), Gaps = 65/338 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q K+F K + LR + + GG +Q++ L+ G +I+V T Sbjct 414 PLAVIMTPTRELALQITKECKKFSKSL---ALRVVCVYGGTGISEQIAELKRGAEIIVCT 470 Query 347 PGRLDDLV--STGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ D++ + G++ NL +V ++V+DEAD + G+ + R+ + V D Q Sbjct 471 PGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRI---VDNVRPD---RQT 524 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLGK 461 ++ SAT ++ L+ +I+ P V + G V V H +V+ K +L E LG Sbjct 525 VMFSATFPR-TMEALARRILSKPVEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILG- 582 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 H ++ KG IIF + D Sbjct 583 --------HYQE-------------------KG-------------SVIIFVDKQEHADG 602 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + ++ + C+ LHG ++R + FK G R L+ T VAARG+D+ Sbjct 603 LLKDLMKAS---------YPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDV 653 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + V+N + P+ ++YVHR GR GRA G A + + Sbjct 654 KQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFI 691 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 39/55 (71%), Gaps = 0/55 (0%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 G+ ++ A+++ ++ PT IQA++IP I+ G D++ A+TGSGKT AF +P+ + Sbjct 346 GISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFR 400 >sp|A1D8G1|DHH1_NEOFI ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dhh1 PE=3 SV=1 Length=507 Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 102/368 (28%), Positives = 161/368 (44%), Gaps = 73/368 (20%) Query 258 LSKAPDG------YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 L++A +G +++ + N + T+T+ ALI+ P+RELA QT K K Sbjct 88 LARAKNGTGKTAAFVIPTLERINPKSTKTQ-------ALILVPTRELALQTSQVCKTLGK 140 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 ++ + ++ GG D + L + V I+VGTPGR+ DL S G +LS+ V+DE Sbjct 141 HLG---INVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDE 197 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD LLS ++ I ++ + P K QV++ SAT VK +K M Sbjct 198 ADKLLSPEFTPVIEQLLSFHP------KDRQVMLFSATF-PLIVKSFKDKHMR------- 243 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 NP L + L I ++ + + Sbjct 244 -----------------NPYEINLMDELTLRGITQYYAFVEE------------KQKVHC 274 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 L ++ + +++Q+IIFC + + L + + G +SC H Sbjct 275 LNTLFS-----KLQINQSIIFCNSTNRVELLAKKITELG---------YSCFYSHARMLQ 320 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR Sbjct 321 QHRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGH 380 Query 612 MGLAISLV 619 +GLAI+L+ Sbjct 381 LGLAINLI 388 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query 64 V 64 + Sbjct 109 I 109 >sp|A7EGG4|PRP28_SCLS1 Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=prp28 PE=3 SV=1 Length=816 Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 90/356 (25%), Positives = 162/356 (46%), Gaps = 52/356 (15%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+I+ P+RELA+Q K+F + + I+GG + +Q L NG +I++ Sbjct 454 DGPYAIILAPTRELAQQIEVEAKKFATPLG---FTCVSIVGGHSLEEQSYNLRNGAEIII 510 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + L L Q ++++DEAD ++ G+ + +N++ + +P Sbjct 511 ATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALP------------ 558 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 V + + D + H L G+D T+ + + P E++ K ++ Sbjct 559 VSNEKPDTDDAEDAQAMSRH------LGGKDRYRQTMMYTAT-MPPAV----EKIAKKYL 607 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA----------IIFCR 514 R + N + E + ++ + GE ++ ++++ I+F Sbjct 608 RRPAIVTIGNI---GEAVETVEQRVEFVAGEDK----RKKRLNEILASGEFQPPIIVFVN 660 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 K +CD + + D K F+ V LHG + +R+ L + G L+ TD+ Sbjct 661 IKRNCDAVAR---------DIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDL 711 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 A RGID+ V V+N + ++Y HRIGR GRA + G+AI+ + E Y + Sbjct 712 AGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDADTMYDL 767 Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 38/66 (58%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++SE + + + ++ + P+ +Q +IP+ L D++ A TGSGKT AF +P+ Sbjct 378 MRSWSESKLPKRLLDVINQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPL 437 Query 61 IQIVYE 66 + + E Sbjct 438 LVYISE 443 >sp|A1CYG5|DBP5_NEOFI ATP-dependent RNA helicase dbp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp5 PE=3 SV=1 Length=489 Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 122/485 (25%), Positives = 200/485 (41%), Gaps = 118/485 (24%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 KN +DLGL I + N ++ L PPK+ V S++ G Sbjct 77 KNFEDLGLDPRILKGLSNMNFRKPSKIQERALPLLLNN-----PPKN-LVGQSQSGTGKT 130 Query 267 VKSQHSGNAQV-TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + ++V T+ + P+ALI+ P+RELA Q L ++ +++D LIIG Sbjct 131 AAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDG------LIIG 184 Query 326 GVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDF 383 D+ S + IVVGTPG + D++ ++++ LVLDEAD +L QG D Sbjct 185 AAVPTDRDSRPKRLECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEADNMLDQQGLGDQ 244 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 R+ +P + +QV++ SAT P+ VH Sbjct 245 CIRVKALLP------RDIQVVLFSATF---------------------------PEHVHQ 271 Query 444 VVVPVNPKTDRLW---ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 P + + E L I+ + D + K L Y + Sbjct 272 YASKFAPNANEITLQHEELTVEGIKQLYLDCADG-----------EDKYKTLVQLYGLLT 320 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + +IIF +T+ +E+ +G + V L G+R P R +++ Sbjct 321 VGS-----SIIFVQTRAAAQEIEKRMTAEG---------HTVVSLTGERDPSVRDAIIDQ 366 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIGRVGRA 609 F++G+ + LI T+V ARGID+ V VIN +P+ + Q Y+HRIGR GR Sbjct 367 FRRGEAKVLIATNVLARGIDVSTVSMVINYDIPELHQPSVPGRQADFQTYLHRIGRTGRF 426 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT 669 R+G++IS V+ +E W ++L++I+ + NC Sbjct 427 GRVGVSISFVSNREE--W-----------------------------EMLNQIQTYFNCE 455 Query 670 ISQVE 674 I +V+ Sbjct 456 IQRVD 460 Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust. Identities = 17/57 (30%), Positives = 36/57 (63%), Gaps = 2/57 (4%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 F ++G+ P I + + M++ P+ IQ ++PL+L +++ +++G+GKT AF + Sbjct 79 FEDLGLDPRILKGLSNMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVL 135 >sp|A1D405|RRP3_NEOFI ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rrp3 PE=3 SV=1 Length=472 Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 102/364 (28%), Positives = 157/364 (43%), Gaps = 59/364 (16%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P + LI+ P+RELA Q + + I+ +R +I+GG+ Q L I+ Sbjct 118 PQSFFGLILAPTRELAFQISKSFESLGSTIN---VRCAVIVGGMDMVSQSIALGKKPHII 174 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T +L +++LV+DEAD LL + ++++ +P + + Sbjct 175 VATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLP------RERR 228 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V+ L + P V SV + V L +S Sbjct 229 TFLFSATMSS-KVESLQRASLSNPLRV------SVSSNKYQTV-----------STLLQS 270 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 ++ H K Y V + E AIIF RT + + Sbjct 271 YLFLPHKH----------------------KDIYLVYLLNEFVGQSAIIFTRTVHETQRI 308 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 F+ + G F + LHG R L +F+ L+ TDVAARG+DI Sbjct 309 S--FLLRSLG-------FGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIP 359 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V V+N LP + + YVHR+GR RA + G+AIS V ++W + + GK Sbjct 360 SVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWLRIEGALGKKLKEYE 419 Query 643 LKED 646 L++D Sbjct 420 LEKD 423 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++G++ ++ +A E M + PT IQAESIPL L G D++ AETGSGKT AF++P++Q Sbjct 53 SFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 112 Query 63 IVYE 66 + E Sbjct 113 ALME 116 >sp|Q4R8K5|IF4A1_MACFA Eukaryotic initiation factor 4A-I OS=Macaca fascicularis OX=9541 GN=EIF4A1 PE=2 SV=1 Length=406 Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 113/398 (28%), Positives = 180/398 (45%), Gaps = 65/398 (16%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQ 308 P G+ +++A G K+ + + Q + A +AL++ P+RELA+Q + Sbjct 64 LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 Y+ IGG R ++ L+ I+VGTPGR+ D+++ L+ ++ Sbjct 123 LGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDEAD +LS+G+ D I + ++ T QV++ SAT+ S DV ++++K M P Sbjct 180 VLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPI 232 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + +K E+ + + + V ER E W Sbjct 233 RILVKKEELTLEGIRQFYINV--------ER------------------------EEWK- 259 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + L Y I QA+IF T+ D L + F+ +HG Sbjct 260 -LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTASAMHG 304 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 D ER + F+ G R LI TD+ ARGID+ V VIN LP ++NY+HRIGR G Sbjct 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 R R G+AI++V E ++ + + YNT ++E Sbjct 365 RFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE 397 Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92 Query 63 IVYETLKDQQ 72 + LK Q Sbjct 93 QIELDLKATQ 102 >sp|P60843|IF4A1_MOUSE Eukaryotic initiation factor 4A-I OS=Mus musculus OX=10090 GN=Eif4a1 PE=1 SV=1 Length=406 Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 113/398 (28%), Positives = 180/398 (45%), Gaps = 65/398 (16%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQ 308 P G+ +++A G K+ + + Q + A +AL++ P+RELA+Q + Sbjct 64 LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 Y+ IGG R ++ L+ I+VGTPGR+ D+++ L+ ++ Sbjct 123 LGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDEAD +LS+G+ D I + ++ T QV++ SAT+ S DV ++++K M P Sbjct 180 VLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPI 232 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + +K E+ + + + V ER E W Sbjct 233 RILVKKEELTLEGIRQFYINV--------ER------------------------EEWK- 259 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + L Y I QA+IF T+ D L + F+ +HG Sbjct 260 -LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG 304 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 D ER + F+ G R LI TD+ ARGID+ V VIN LP ++NY+HRIGR G Sbjct 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 R R G+AI++V E ++ + + YNT ++E Sbjct 365 RFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE 397 Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92 Query 63 IVYETLKDQQ 72 + LK Q Sbjct 93 QIELDLKATQ 102 >sp|P60842|IF4A1_HUMAN Eukaryotic initiation factor 4A-I OS=Homo sapiens OX=9606 GN=EIF4A1 PE=1 SV=1 Length=406 Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 113/398 (28%), Positives = 180/398 (45%), Gaps = 65/398 (16%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQ 308 P G+ +++A G K+ + + Q + A +AL++ P+RELA+Q + Sbjct 64 LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 Y+ IGG R ++ L+ I+VGTPGR+ D+++ L+ ++ Sbjct 123 LGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDEAD +LS+G+ D I + ++ T QV++ SAT+ S DV ++++K M P Sbjct 180 VLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPI 232 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + +K E+ + + + V ER E W Sbjct 233 RILVKKEELTLEGIRQFYINV--------ER------------------------EEWK- 259 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + L Y I QA+IF T+ D L + F+ +HG Sbjct 260 -LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG 304 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 D ER + F+ G R LI TD+ ARGID+ V VIN LP ++NY+HRIGR G Sbjct 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 R R G+AI++V E ++ + + YNT ++E Sbjct 365 RFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE 397 Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92 Query 63 IVYETLKDQQ 72 + LK Q Sbjct 93 QIELDLKATQ 102 >sp|Q3SZ54|IF4A1_BOVIN Eukaryotic initiation factor 4A-I OS=Bos taurus OX=9913 GN=EIF4A1 PE=2 SV=1 Length=406 Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 113/398 (28%), Positives = 180/398 (45%), Gaps = 65/398 (16%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQ 308 P G+ +++A G K+ + + Q + A +AL++ P+RELA+Q + Sbjct 64 LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 Y+ IGG R ++ L+ I+VGTPGR+ D+++ L+ ++ Sbjct 123 LGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDEAD +LS+G+ D I + ++ T QV++ SAT+ S DV ++++K M P Sbjct 180 VLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPI 232 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + +K E+ + + + V ER E W Sbjct 233 RILVKKEELTLEGIRQFYINV--------ER------------------------EEWK- 259 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + L Y I QA+IF T+ D L + F+ +HG Sbjct 260 -LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG 304 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 D ER + F+ G R LI TD+ ARGID+ V VIN LP ++NY+HRIGR G Sbjct 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 R R G+AI++V E ++ + + YNT ++E Sbjct 365 RFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE 397 Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92 Query 63 IVYETLKDQQ 72 + LK Q Sbjct 93 QIELDLKATQ 102 >sp|O34750|YFML_BACSU Probable ATP-dependent RNA helicase YfmL OS=Bacillus subtilis (strain 168) OX=224308 GN=yfmL PE=1 SV=1 Length=376 Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 99/338 (29%), Positives = 157/338 (46%), Gaps = 61/338 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I+ PSREL Q I+ +K +LR +IGG + Q+ L+ I+VGT Sbjct 73 PQAVILAPSRELVMQIFQVIQDWKA---GSELRAASLIGGANVKKQVEKLKKHPHIIVGT 129 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ +L+ KL + +V+ +VLDE D L+ + + + ++ + + + Q++ Sbjct 130 PGRVFELIKAKKLKMHEVKTIVLDETDQLVLPEHRETMKQI------IKTTLRDRQLLCF 183 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL KK +E ++ +L E P+ + K R GK + Sbjct 184 SATL-----KKETEDVLR-----ELAQE---PEVL---------KVQRSKAEAGKVKHQY 221 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +D +K+L+ + + QA++F R D NL Y Sbjct 222 LICDQRDK--------------VKLLQKLSRLEGM------QALVFVR---DIGNLSVY- 257 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 H LH + K ER + + F+ G+ L+ TD+AARG+DI +PY Sbjct 258 -----AEKLAYHHVELGVLHSEAKKMERAKIIATFEDGEFPLLLATDIAARGLDIENLPY 312 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VI+ +PDE YVHR GR GRA + G +SLV +E Sbjct 313 VIHADIPDE-DGYVHRSGRTGRAGKEGNVLSLVTKLEE 349 Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 28/38 (74%), Gaps = 0/38 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 PT +Q ++ LI+ G DV+ + TG+GKT A+++PV++ Sbjct 27 PTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLE 64 >sp|Q2HGF7|DBP5_CHAGB ATP-dependent RNA helicase DBP5 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP5 PE=3 SV=1 Length=479 Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 117/408 (29%), Positives = 182/408 (45%), Gaps = 89/408 (22%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-----------AQVTQTKFLPNA 286 L NF ++ K K + LS P I +SQ SG ++V TK P Sbjct 88 LAMNF-KKPSKIQEKALPLMLSNPPRNMIAQSQ-SGTGKTAAFVLTVLSRVDLTK--PTQ 143 Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV--DIVV 344 P+AL++ PSRELA Q + I+ ++ +N + E I G ++ E GV ++VV Sbjct 144 PQALLLAPSRELARQIQSVIQTIGQFCENLNV-EAAIPGSISR-------ETGVRANVVV 195 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQV 403 GTPG + DL+ + ++SQ++ +V+DEAD +L QG D R+ +P K +Q Sbjct 196 GTPGTVMDLIRRRQFDVSQLKIMVIDEADNMLDQQGMGDQCVRVKGMLP------KDIQT 249 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT EK+M F H + Sbjct 250 LLFSAT--------FPEKVMIFAR--------KYATNAHEI------------------K 275 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +R D+ K ++ + P+ S+ IL Y + I ++IF RT+ ++ Sbjct 276 LRHTDLTVKGISQMYMDCPD-ESKKYDILCKLYGLMTIG-----SSVIFVRTRESASEIQ 329 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + GH+ S LHG + R L+ F+ G + LI T+V ARGID+ Sbjct 330 RRM-------EADGHKVS--ALHGAHEGQNRDALLDDFRSGRSKVLITTNVLARGIDVSS 380 Query 584 VPYVINVTLP--------DEKQNYVHRIGRVGRAERMGLAISLVATEK 623 V VIN +P + + Y+HRIGR GR R+G++IS V K Sbjct 381 VSMVINYDIPMKGPGDKEPDMETYLHRIGRTGRFGRVGVSISFVYDRK 428 Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSI 58 +A+F E+G+ I + M++ P+ IQ +++PL+L +++ +++G+GKT AF + Sbjct 71 VASFEELGLAKSINDGLLAMNFKKPSKIQEKALPLMLSNPPRNMIAQSQSGTGKTAAFVL 130 Query 59 PVIQIV 64 V+ V Sbjct 131 TVLSRV 136 >sp|A7ESL7|DBP10_SCLS1 ATP-dependent RNA helicase dbp10 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp10 PE=3 SV=2 Length=920 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 105/337 (31%), Positives = 158/337 (47%), Gaps = 34/337 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ PSRELA QTL +K+F + D L+ +L++GG + +Q + DIV+ TP Sbjct 160 RALIMSPSRELALQTLKVVKEFGRGTD---LKCVLLVGGDSLEEQFGFMAANPDIVIATP 216 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS ++++V DEAD L G++ + + + +P Q ++ S Sbjct 217 GRFLHLKVEMSLDLSSMKYVVFDEADRLFEMGFAAQLGEILHALPISR------QTLLFS 270 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS-HIRT 466 ATL V+ + + P+ V L E V + V + E+ G HI Sbjct 271 ATLPKSLVE-FARAGLQEPSLVRLDAESKVSPDLQSAFFSV-----KGAEKEGALLHILQ 324 Query 467 DDVHAKDNTRPGA-NSPEMWSEAIKILKG-EYAVRAIK--EHKMDQAIIFCRTKIDCDNL 522 D V A N+ + +S+ K +G + + +K EH IIF TK D L Sbjct 325 DLVKMPTGLPENALNATDNFSKKRK--RGPDGPTKKLKPTEH---STIIFAATKHHVDYL 379 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 G F+ +G R +E F+ G L+ TDVAARGIDI Sbjct 380 ASLLRMSG---------FAVSHAYGSLDQTARNIQVEDFRTGKSNILVVTDVAARGIDIP 430 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + VIN P + + +VHR+GR RA + G + SLV Sbjct 431 VLANVINYDFPPQPKVFVHRVGRTARAGQRGWSYSLV 467 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + +PT IQ ++IPL+L DV+ A TGSGKT AF IP+I+ Sbjct 90 FQAMGLNSHLLKAISRKGFNVPTPIQRKTIPLVLDNQDVVGMARTGSGKTAAFVIPMIE 148 >sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0708600 PE=2 SV=1 Length=736 Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 94/348 (27%), Positives = 159/348 (46%), Gaps = 50/348 (14%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA+Q +F Y+ ++ + I+GG + +Q + G ++V+ T Sbjct 392 PYAVVMAPTRELAQQIEEETVKFATYLG---IKVVSIVGGQSIEEQGFKIRQGCEVVIAT 448 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D + L+Q ++VLDEAD ++ G+ PQV L + Sbjct 449 PGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFE----------PQVVG---VLDAMPS 495 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 S + ++L K ++ T++ ++P V ERL + ++R Sbjct 496 SNLKPENEDEELDAKTIYRTTYM---FSATMPPAV---------------ERLARKYLRN 537 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD----QAIIFCRTKIDCDNL 522 V + ++ ++ + + K + +++ D AI+FC TK D Sbjct 538 PVVVTIGT---AGKATDLITQNVIMTKESEKMSRLQKILTDLGDKPAIVFCNTKKSAD-- 592 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + DK G F LHG + +R+ +L+ F+ L+ TDVA RGIDI Sbjct 593 -----ARAKDLDKAG--FRVTTLHGGKSQEQRETSLDGFRNRRFTVLVATDVAGRGIDIP 645 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V +VIN +P Y HRIGR GRA + GLA S + E +++ + Sbjct 646 DVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTDIFFDL 693 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 40/64 (63%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M +SE + E+ +AVE+ + P+ IQ SIPL L DV+ AETGSGKT AF +P+ Sbjct 314 MRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPM 373 Query 61 IQIV 64 + + Sbjct 374 LSYI 377 >sp|Q6BML1|PRP5_DEBHA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=PRP5 PE=3 SV=2 Length=913 Score = 119 bits (297), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 100/350 (29%), Positives = 161/350 (46%), Gaps = 65/350 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+RELA Q + F K ++ + GG + Q++ L+ G I+V Sbjct 389 DGPIGLIMTPTRELALQIHKELNHFTKKLN---ISSCCCFGGSSIESQIAELKKGAQIIV 445 Query 345 GTPGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 GTPGR+ DL++ +G++ NL +V +LVLDEAD + G+ PQVT R+ Sbjct 446 GTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFE----------PQVTKVFTRV 495 Query 402 ----QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 Q ++ SAT ++ L++KI+ P + + G V + V + D+ E Sbjct 496 RPDRQTVLFSATFPR-KMELLAKKILDNPMEIVVGGISVVASEITQKVELFENEDDKSLE 554 Query 458 RLGKSHIRT--DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 S + + +D KD KIL IF Sbjct 555 EAKFSKLLSTLNDYGDKD-------------AECKIL------------------IFVEK 583 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD--VRFLICTD 573 +I D L + + ++ C+ +HG + +RK + F + V LI T Sbjct 584 QIAADELLVKLLTE---------KYPCLAIHGGKDQIDRKHAIREFSSSNSGVNILIATS 634 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 +AARG+D+ G+ VIN ++YVHR+GR GRA R G AI+ V++++ Sbjct 635 IAARGLDVKGLNLVINYEAASHMEDYVHRVGRTGRAGRKGTAITFVSSKQ 684 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 5/75 (7%) Query 4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +S++G+ I +E +++ P+ IQA++IP I+ G D++ A+TGSGKT +F +P+++ Sbjct 318 WSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLR 377 Query 63 IVYETLKDQQEGKKG 77 ++DQ KKG Sbjct 378 ----HIQDQPPLKKG 388 >sp|A1DL85|SUB2_NEOFI ATP-dependent RNA helicase sub2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=sub2 PE=3 SV=1 Length=441 Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 101/356 (28%), Positives = 163/356 (46%), Gaps = 60/356 (17%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +P L++ +RELA Q N +F KY+ P ++ + GG + + VL N Sbjct 119 QLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPIQKDIEVLSN 176 Query 339 G---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 +IVVGTPGRL+ LV KL+L V+ VLDE D +L Q + R +I + T Sbjct 177 KESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQID---MRRDVQEIFRAT 233 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K QV++ SATL S +++ + +K M P V + +D T+H + + Sbjct 234 PADK--QVMMFSATL-SQEIRPICKKFMRNPLEVYV--DDDTKLTLHGL--------QQY 280 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + +L +S K + + +Q IIF ++ Sbjct 281 YIKLSESE-----------------------------KNRKLNELLDSLEFNQVIIFVKS 311 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + + L++ + F + +H ER + + FK+ + R + TDV Sbjct 312 TLRANELDKLL---------RECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 362 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK-EKVWYHV 630 RGIDI + IN LP + +Y+HR+GR GR GL+IS V++E+ EKV + Sbjct 363 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEEDEKVLKEI 418 >sp|Q879Y6|RHLB_XYLFT ATP-dependent RNA helicase RhlB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) OX=183190 GN=rhlB PE=3 SV=1 Length=543 Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 103/336 (31%), Positives = 158/336 (47%), Gaps = 58/336 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ALI+ P+RELA Q N+ +F N LR LI GGV Q +L G D+V Sbjct 82 PEDPRALILAPTRELAIQIYNDAVKFG---GNLGLRFALIYGGVDYDRQREMLRKGADVV 138 Query 344 VGTPGRLDDLVSTGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D + ++ +L VLDEAD + G+ I + ++P+ S Q Sbjct 139 IATPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFIKDIRFILRRLPERCSR----Q 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL S V +L+ + M+ P + + E T R+ +R+ Sbjct 195 TLLFSATL-SHRVLELAYEYMNEPEKLVAETESVT--------------TTRVRQRI--- 236 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + ++ E I +L G + ++ + ++F TK+ + + Sbjct 237 YFPAEE------------------EKIPLLLG-----LLSRNEGMRTMVFVNTKVFVEGV 273 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + D+ G++ L GD +R+ L RF+KG + L+ TDVAARG+ I Sbjct 274 ARAL-------DEAGYRVGV--LSGDVPQRKRETLLNRFQKGQLEILVATDVAARGLHID 324 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 GV YV N LP + ++YVHRIGR R G AIS Sbjct 325 GVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISF 360 Score = 41.6 bits (96), Expect = 0.027, Method: Compositional matrix adjust. Identities = 21/59 (36%), Positives = 33/59 (56%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + P + + + L T IQA ++P+ L G D+ A+TG+GKT AF + V+ Sbjct 11 FSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVN 69 >sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=RRP3 PE=3 SV=1 Length=484 Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 97/349 (28%), Positives = 146/349 (42%), Gaps = 60/349 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q + I +R +++GG+ Q L I+V TPG Sbjct 109 ALVLAPTRELAYQISQQVTSLGSGIG---VRTAVLVGGMDMMSQSIALSKRPHIIVATPG 165 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T +L +++LV+DEAD LL + I+++ IP K + S Sbjct 166 RLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKILKVIP------KERNTYLFS 219 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + V KL ++ P V++ + S T+ + + K Sbjct 220 ATMTT-KVAKLQRASLNKPVRVEVSSKYSTVSTLLQHYLLLPLKN--------------- 263 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 K Y + E +IF RT D L Sbjct 264 -------------------------KDAYLLYLANELSSSSMMIFTRTVADSQRLSIILR 298 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G F + LHG R +L +FK G L+ TDVA+RG+DI V V Sbjct 299 RLG---------FPAIPLHGQMTQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLV 349 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 IN +P ++YVHR+GR RA R G +I+LV ++ + S GK Sbjct 350 INYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDVEILQRIESHIGK 398 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/63 (48%), Positives = 47/63 (75%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ PE+ +A M + P+DIQAE+IP L G D++ A+TGSGKT AFS+P++Q Sbjct 40 FADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPILQT 99 Query 64 VYE 66 ++E Sbjct 100 LWE 102 >sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=RRP3 PE=3 SV=1 Length=484 Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 97/349 (28%), Positives = 146/349 (42%), Gaps = 60/349 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q + I +R +++GG+ Q L I+V TPG Sbjct 109 ALVLAPTRELAYQISQQVTSLGSGIG---VRTAVLVGGMDMMSQSIALSKRPHIIVATPG 165 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T +L +++LV+DEAD LL + I+++ IP K + S Sbjct 166 RLMDHLENTKGFSLKSLKYLVMDEADRLLDLDFGPIIDKILKVIP------KERNTYLFS 219 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + V KL ++ P V++ + S T+ + + K Sbjct 220 ATMTT-KVAKLQRASLNKPVRVEVSSKYSTVSTLLQHYLLLPLKN--------------- 263 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 K Y + E +IF RT D L Sbjct 264 -------------------------KDAYLLYLANELSSSSMMIFTRTVADSQRLSIILR 298 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G F + LHG R +L +FK G L+ TDVA+RG+DI V V Sbjct 299 RLG---------FPAIPLHGQMTQSLRLASLNKFKSGGRSILVATDVASRGLDIPLVDLV 349 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 IN +P ++YVHR+GR RA R G +I+LV ++ + S GK Sbjct 350 INYDMPTNSKDYVHRVGRTARAGRSGKSITLVTQYDVEILQRIESHIGK 398 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 30/63 (48%), Positives = 47/63 (75%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ PE+ +A M + P+DIQAE+IP L G D++ A+TGSGKT AFS+P++Q Sbjct 40 FADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPILQT 99 Query 64 VYE 66 ++E Sbjct 100 LWE 102 >sp|P29562|IF4A1_RABIT Eukaryotic initiation factor 4A-I (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=EIF4A1 PE=1 SV=2 Length=398 Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 113/398 (28%), Positives = 180/398 (45%), Gaps = 65/398 (16%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQ 308 P G+ +++A G K+ + + Q + A +AL++ P+RELA+Q + Sbjct 56 LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 114 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 Y+ IGG R ++ L+ I+VGTPGR+ D+++ L+ ++ Sbjct 115 LGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 171 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDEAD +LS+G+ D I + ++ T QV++ SAT+ S DV ++++K M P Sbjct 172 VLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPI 224 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + +K E+ + + + V ER E W Sbjct 225 RILVKKEELTLEGIRQFYINV--------ER------------------------EEWK- 251 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + L Y I QA+IF T+ D L + F+ +HG Sbjct 252 -LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG 296 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 D ER + F+ G R LI TD+ ARGID+ V VIN LP ++NY+HRIGR G Sbjct 297 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 356 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 R R G+AI++V E ++ + + YNT ++E Sbjct 357 RFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIEE 389 Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 25 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 84 Query 63 IVYETLKDQQ 72 + LK Q Sbjct 85 QIELDLKATQ 94 >sp|Q5R5F5|IF4A1_PONAB Eukaryotic initiation factor 4A-I OS=Pongo abelii OX=9601 GN=EIF4A1 PE=2 SV=1 Length=406 Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 107/361 (30%), Positives = 166/361 (46%), Gaps = 64/361 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVV 344 A +AL++ P+RELA+Q + Y+ IGG R ++ L+ I+V Sbjct 100 ATQALVLAPTRELAQQIQKVVMALGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIV 156 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ T QV+ Sbjct 157 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNT------QVV 210 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ S DV ++++K M P + +K E+ + + + V ER Sbjct 211 LLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINV--------ER------ 255 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 E W + L Y I QA+IF T+ D L + Sbjct 256 ------------------EEWK--LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTE 290 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F+ +HGD ER + F+ G R LI TD+ ARGID+ V Sbjct 291 KM---------HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQV 341 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 VIN LP ++NY+HRIGR GR R G+AI++V E ++ + + YNT ++ Sbjct 342 SLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ETFYNTSIE 396 Query 645 E 645 E Sbjct 397 E 397 Score = 37.0 bits (84), Expect = 0.58, Method: Compositional matrix adjust. Identities = 18/48 (38%), Positives = 29/48 (60%), Gaps = 0/48 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 P+ IQ +I + G DV+ A++G+GKT F+I ++Q + LK Q Sbjct 55 PSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQ 102 >sp|Q6CJU1|DBP5_KLULA ATP-dependent RNA helicase DBP5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP5 PE=3 SV=1 Length=469 Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 109/348 (31%), Positives = 162/348 (47%), Gaps = 73/348 (21%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N+ +A+ + P+RELA QTL I++ K+ K L++ R++ +IVV Sbjct 148 NSTQAICLSPARELARQTLEVIQEMGKFT---KTSSQLVVPDSFERNK----PITANIVV 200 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQV 403 GTPG + DL+ LNL ++ VLDEAD +L QG D R+ +P K Q+ Sbjct 201 GTPGTVLDLIRRKMLNLGSIKVFVLDEADNMLDKQGLGDQCIRVKKFLP------KTCQL 254 Query 404 IVCSATLHSFD--VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 ++ SAT FD V++ ++KI+ PT V L+ L K Sbjct 255 VLFSAT---FDDGVRQYAKKII--PTAVSLE--------------------------LQK 283 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + + + K N ++ IL Y + I +IIF +TK + Sbjct 284 NEVNVSAI--KQLFMDCDNEEHKYT----ILSELYGLLTI-----GSSIIFVKTKQTANL 332 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L K+GHQ S LHGD + +R + ++ F++G + LI T+V ARGIDI Sbjct 333 LYAKL-------KKEGHQVSI--LHGDLQSQDRDRLIDDFREGRSKVLITTNVLARGIDI 383 Query 582 HGVPYVINVTLPD------EKQNYVHRIGRVGRAERMGLAISLVATEK 623 V V+N LP + YVHRIGR GR R G+AIS + +K Sbjct 384 PSVSMVVNYDLPTLPNGQADPSTYVHRIGRTGRFGRTGVAISFIHDKK 431 >sp|Q9DBN9|DDX59_MOUSE Probable ATP-dependent RNA helicase DDX59 OS=Mus musculus OX=10090 GN=Ddx59 PE=1 SV=1 Length=619 Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 163/349 (47%), Gaps = 61/349 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 P ALI+ P+RELA Q K+ + P+++ +L++GG+ QL L V +++ Sbjct 271 TPSALILTPTRELAIQIERQAKELMSGL--PRMKTVLLVGGLPLPPQLYRLRQHVKVIIA 328 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D++ ++LS ++ +V+DEAD +L G+ + + P Q I+ Sbjct 329 TPGRLLDIIKQSSVSLSGIKIVVVDEADTMLKMGFQQQVLDVLEHTP------GDCQTIL 382 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP-DTVHHVVVPVN--PKTDRLWERLGKS 462 SAT+ +++L+++++H P + + G+ ++P +V +++ V K +L+E L Sbjct 383 VSATIPD-SIEQLTDQLLHNPVRI-ITGDKNLPCASVRQIILWVEDPAKKKKLFEILNDQ 440 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + V + + GA+ + SEA++ + G Sbjct 441 KLFKPPVLVFVDCKLGAD---LLSEAVQKITG---------------------------- 469 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + +H ++ ER+ L+ +GD ++ T V RG+D+ Sbjct 470 -----------------LNSTSIHSEKSQVERRDILKGLLEGDYEVVVSTGVLGRGLDLV 512 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 V V+N +P YVH++GRVGR + G AI+ + +++++ V Sbjct 513 NVKLVVNFDMPSSMDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDVA 561 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F G + Q +++ + +PT IQ + IP+ L G D+L +A+TGSGKT AF +PVI Sbjct 205 FEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262 >sp|Q4IFI0|RRP3_GIBZE ATP-dependent rRNA helicase RRP3 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=RRP3 PE=3 SV=1 Length=486 Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 101/379 (27%), Positives = 158/379 (42%), Gaps = 65/379 (17%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q + I LR +I+GG+ Q L IVV TPGR Sbjct 132 LVLAPTRELATQIGQAFEALGSLIS---LRCAVIVGGLDMVPQAIALGKKPHIVVATPGR 188 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L D L T +L +++L++DEAD LL + I+++ +P + + + SA Sbjct 189 LVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSIDKILKFVP------RERRTYLFSA 242 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGE--DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 T+ S ++ L + P V + +V + + + +P+ Sbjct 243 TISS-KIESLQRASLRDPVKVSISSNKYQTVSTLLQNYLFIPHPQ--------------- 286 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 DVH + I EH I+F RT + + Sbjct 287 KDVHL--------------------------IYLINEHAGQSTIVFTRTVWETQRVSILL 320 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G F + LHG R L +F+ G L+ TDVAARG+DI V Sbjct 321 RTLG---------FGAIPLHGQLSQSSRLGALNKFRSGTRDILVATDVAARGLDIPSVDV 371 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC--YNTRLK 644 V+N LP + + Y+HR+GR RA + G+AISLV +++ + ++ GK Y T + Sbjct 372 VLNYDLPQDSKTYIHRVGRTARAGKSGVAISLVTQYDLEIYLRIEAALGKKLAEYPTEKE 431 Query 645 EDGGCTIWYNEMQLLSEIE 663 E E Q ++ IE Sbjct 432 EVMAFQSRVEEAQRIARIE 450 Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++GV + +A E++++ PT IQ +SIP+ L G D++ AETGSGKT AF++PV+Q Sbjct 62 FKDLGVNDALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAFALPVLQA 121 Query 64 VYE 66 + + Sbjct 122 LLD 124 >sp|Q9Y6V7|DDX49_HUMAN Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 SV=1 Length=483 Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 104/335 (31%), Positives = 147/335 (44%), Gaps = 61/335 (18%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q + K + L++ +I+GG+ Q L +V+ TPGR Sbjct 74 LVLTPTRELAYQIAEQFRVLGKPLG---LKDCIIVGGMDMVAQALELSRKPHVVIATPGR 130 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L D L S+ ++ ++RFLV+DEAD LL QG +DF + + V + R Q ++ SA Sbjct 131 LADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPA---RRQTLLFSA 187 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 TL T +L+G + PV+ E+L + ++ Sbjct 188 TLTD--------------TLRELQGLATNQPFFWEAQAPVST-----VEQLDQRYLLV-- 226 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK----EHKMDQAIIFCRTKIDCDNLEQ 524 PE +A Y V I+ EH+ IIF T C L Sbjct 227 -------------PEKVKDA-------YLVHLIQRFQDEHEDWSIIIFTNTCKTCQILCM 266 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + F V LH K ER L +FK R LI TDVA+RG+DI V Sbjct 267 ML---------RKFSFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTV 317 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN P + Y+HR+GR RA R G AI+LV Sbjct 318 QVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLV 352 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/66 (41%), Positives = 40/66 (61%), Gaps = 0/66 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MA F+E+G+ + + ++ PT +Q IP IL G D L A+TGSGKT AF +P+ Sbjct 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60 Query 61 IQIVYE 66 +Q + E Sbjct 61 LQKLSE 66 >sp|Q757U8|DBP10_EREGS ATP-dependent RNA helicase DBP10 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP10 PE=3 SV=1 Length=960 Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 96/345 (28%), Positives = 160/345 (46%), Gaps = 33/345 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QT K FK++ LR +L+ GG DQ S++ + D+++ TP Sbjct 192 RAMILSPSRELAMQTH---KVFKEFAKGSNLRSVLLTGGDGLEDQFSMMMSNPDVIIATP 248 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+L + ++V DEAD L G+ + +N + +P Q ++ S Sbjct 249 GRFLHLKVEMNLDLHSIEYVVFDEADRLFEMGFQEQLNELLGSLPTAR------QTLLFS 302 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR-------LWERLG 460 ATL S V ++ + P V L E V + + + + V K D L + + Sbjct 303 ATLPSSLV-DFAKAGLTNPVLVRLDTETKVSENLEMLFLSV--KNDEREANLLYLLQEVI 359 Query 461 KSHIRTDD----VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM-DQAIIFCRT 515 K + T++ + N + E + K + + + K+ + IIF T Sbjct 360 KIPVATEEQLQRFRKQSNDDADDSDDETDKKKKHSKKSKQPLPSAKDMPSPNSTIIFVST 419 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + + + G + L+G H R+Q L F+ G L+ TDVA Sbjct 420 RHHVEYVSNLLKDCG---------YLVSYLYGTLDQHARRQQLHNFRCGLTNILVVTDVA 470 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 ARG+DI + V+N++LP + +VHR+GR RA G A ++++ Sbjct 471 ARGVDIPLLANVVNMSLPASSKIFVHRVGRTARAGNKGWAYTILS 515 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ I + + PT IQ ++IPLIL D++ A TGSGKT AF +P+I+ Sbjct 121 SFASFGLSKFILGNISRKGFRQPTPIQRKTIPLILQQRDIVGMARTGSGKTAAFVLPLIE 180 >sp|A6R9U4|MAK5_AJECN ATP-dependent RNA helicase MAK5 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=MAK5 PE=3 SV=1 Length=772 Score = 118 bits (295), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 110/380 (29%), Positives = 168/380 (44%), Gaps = 47/380 (12%) Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 Y +K++ Q + P ALI+ P+RELA Q +I N R L+ Sbjct 248 YYLKNRREEPVQHNDAELSSKYPIALILSPTRELAHQLSKHITALCTNAPNINARIALLT 307 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYS 381 GG++ + Q VL N DIV+GTPGRL D++STG ++FLV+DEAD LLS+G+ Sbjct 308 GGLSVQKQQRVLANA-DIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRLLSEGHF 366 Query 382 DFINRMHNQIPQ------VTSDGKR---------LQVIVCSATLHSFDVKKLSEKIMHFP 426 + + + + VT+D + Q +V SAT H +KL+ K +F Sbjct 367 KEVEEILTALDRKEIHHKVTADSESEDDASRESPRQTLVFSATFHKGLQQKLAGKGRYFD 426 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 DL + ++ +++ +N + DR I + V + N E Sbjct 427 G--DLLDDKQ---SMEYLLKKLNFREDR------PKFIDVNPV-----AQMAENLKEGLV 470 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 E + K Y + H + ++F + I F+Q P + LH Sbjct 471 ECPAMEKDLYLYTLMLYHPQHRTLVFTNS-ISAVRRLTAFLQNLNLP--------ALALH 521 Query 547 GDRKPHERKQNLERFKKGDV---RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 R +++ERF L+ TDVAARG+DI G+ +I+ +P YVHR Sbjct 522 SSMAQKARLRSVERFSSPTADPSSILVATDVAARGLDIKGIDLIIHYHVPRTADTYVHRS 581 Query 604 GRVGRAERMGLAISLVATEK 623 GR RA G +I L A E+ Sbjct 582 GRTARASASGKSILLCAPEE 601 Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 43/71 (61%), Gaps = 0/71 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ + +G+ EI ++ ++ + PT IQ IPLI G DV+ A TGSGKT AF IP+ Sbjct 186 VSGWDPLGISAEIQTSLSKLRFAKPTPIQTACIPLIASGHDVVGKASTGSGKTLAFGIPI 245 Query 61 IQIVYETLKDQ 71 ++ + +++ Sbjct 246 LEYYLKNRREE 256 >sp|Q4WIN6|DBP5_ASPFU ATP-dependent RNA helicase dbp5 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp5 PE=3 SV=2 Length=489 Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 107/417 (26%), Positives = 174/417 (42%), Gaps = 123/417 (29%) Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN- 338 T+ + P+ALI+ P+RELA Q L ++ +++D LIIG D+ S + Sbjct 145 TEQMQKTPQALILAPTRELARQILGVVQVMGQFVDG------LIIGAAVPTDRDSRPKRL 198 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSD 397 IVVGTPG + D++ ++++ LVLDEAD +L QG D R+ +P Sbjct 199 ECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEADNMLDQQGLGDQCIRVKALLP----- 253 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 + +QV++ SAT P+ VH P + + Sbjct 254 -RDIQVVLFSATF---------------------------PEHVHQYASKFAPNANEIT- 284 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL-----KGEYAVRAIKEH----KMDQ 508 E+ E IK L GE R + + + Sbjct 285 ---------------------LQHEELTVEGIKQLYLDCADGEDKYRTLVQLYGLLTVGS 323 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 +IIF +T+ +E+ +G + V L G+R P R +++F++G+ + Sbjct 324 SIIFVQTRAAAQEIERRMTAEG---------HTVVSLTGERDPSVRDAIIDQFRRGEAKV 374 Query 569 LICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIGRVGRAERMGLAIS 617 LI T+V ARGID+ V VIN +P+ + Q Y+HRIGR GR R+G++IS Sbjct 375 LIATNVLARGIDVSTVSMVINYDIPELHQPNVPGRQADFQTYLHRIGRTGRFGRVGVSIS 434 Query 618 LVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 V+ +E W ++L++I+ + NC I +V+ Sbjct 435 FVSNREE--W-----------------------------EMLNQIQTYFNCEIQRVD 460 Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust. Identities = 17/57 (30%), Positives = 36/57 (63%), Gaps = 2/57 (4%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 F ++G+ P I + + M++ P+ IQ ++PL+L +++ +++G+GKT AF + Sbjct 79 FEDLGLDPRILKGLSSMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVL 135 >sp|Q4WXW1|DBP8_ASPFU ATP-dependent RNA helicase dbp8 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp8 PE=3 SV=1 Length=526 Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 101/341 (30%), Positives = 154/341 (45%), Gaps = 64/341 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 +++ P+RELA Q IK I P+ ++ +LI GG R Q L +V+ TPG Sbjct 168 VVLTPTRELALQIFEQIK----AISAPQSMKPVLITGGTDMRPQAIALAGRPHVVIATPG 223 Query 349 RLDDLV-STGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 RL D + S+G+ L +VR +VLDEAD LL+ G + + + + +R Q + Sbjct 224 RLADHIKSSGEDTVCGLKRVRMVVLDEADRLLASGPGSMLPDVETCLSALPPSSER-QTL 282 Query 405 VCSATLHSFDVKKL------SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + +AT+ + +V+ L + K F T + + + ++P T+ + V P T R Sbjct 283 LFTATV-TPEVRALKNMPRSANKPPVFVTEISTENQGTIPPTLKQTYLKV-PLTHR---- 336 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 +H +T A+ P AI+FC Sbjct 337 -------EAFLHVLLSTEGNASKP--------------------------AIVFCNHTKT 363 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D LE+ + H+ + LH ER NL RF+ R L+ TDVA+RG Sbjct 364 ADLLERML-------RRLSHRVTS--LHSLLPQSERNANLARFRASAARILVATDVASRG 414 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +DI V VIN +P +YVHR+GR RA R G A++LV Sbjct 415 LDIPTVSLVINYDVPRNPDDYVHRVGRTARAGRRGEAVTLV 455 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AFS+P++ Sbjct 96 SSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPML 155 Query 62 Q 62 Q Sbjct 156 Q 156 >sp|Q59PR3|DBP8_CANAL ATP-dependent RNA helicase DBP8 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP8 PE=3 SV=1 Length=440 Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 101/345 (29%), Positives = 159/345 (46%), Gaps = 75/345 (22%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 LI+ P+RELA Q +QF N ++ +++GG Q L+ V+ TPGR Sbjct 73 LILTPTRELALQI---AEQFAALGANMNIKVAVVVGGEDFVQQTLALQRKPHFVIATPGR 129 Query 350 L-DDLVSTGKLNLS---QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 L D ++++G+ +S +V++LVLDEAD LLS + + R + +P TSD + Q ++ Sbjct 130 LADHILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVLP--TSDKR--QTLL 185 Query 406 CSATLHSFDVKKLSEK---------IMHFPTWVDLKGEDSVPDT--VHHVVVPVNPKTDR 454 +AT+ V+ L EK MH VD + ++P T + +V VP Sbjct 186 FTATITD-AVRALKEKPPTPGKPPVFMHEVETVD---KVAIPSTLQISYVFVP------- 234 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 S+++ E + +I L+ + K A+IF Sbjct 235 -------SYVK-----------------EAYLNSILHLE---------QFKDSTAVIFVN 261 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 + L + + F LH + ER +L RFK G R LI TDV Sbjct 262 RTTTAEVLRRML---------RKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDV 312 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 A+RG+DI V VIN +P + +++HR+GR RA R G A+S++ Sbjct 313 ASRGLDIPTVELVINFDIPADPDDFIHRVGRTARAGRKGDAVSII 357 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 40/59 (68%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F+++GV ++++++ M PT IQ+ IP IL G D + A+TGSGKT AF+ P++ Sbjct 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPML 60 >sp|Q6FQQ6|IF4A_CANGA ATP-dependent RNA helicase eIF4A OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=TIF1 PE=3 SV=1 Length=396 Score = 114 bits (285), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 102/360 (28%), Positives = 164/360 (46%), Gaps = 64/360 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+AL++ P+RELA Q + ++D ++ IGG + + L + IVVG Sbjct 91 APQALMLAPTRELALQIQKVVMALGFHMD---IKVHACIGGTSFVEDAEGLRDA-QIVVG 146 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + K + ++ +LDEAD +LS G+ + I ++ +P T QV++ Sbjct 147 TPGRVFDNIQRRKFKVDNIKMFILDEADEMLSTGFKEQIYQIFTMLPPTT------QVVL 200 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ DV +++ K M P + +K ++ + + V V E K Sbjct 201 LSATMPR-DVLEVTAKFMQNPVRILVKKDELTLEGIKQFYVNVE-------EEQFKYDCL 252 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 TD ++I + QA+IFC T+ + L Q Sbjct 253 TD-----------------LYDSISV---------------TQAVIFCNTRRKVEELTQR 280 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F+ ++ D ER ++ F+ G R LI TD+ ARGID+ V Sbjct 281 L---------TADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVS 331 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN LP K+NY+HRIGR GR R G+AI+ + E + + + Y+T+++E Sbjct 332 LVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVNEDVQALREL-----EQFYSTQIEE 386 Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust. Identities = 24/69 (35%), Positives = 39/69 (57%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + ++ + V + P+ IQ +I I+ G DVL A++G+GKTG FSI +Q Sbjct 25 FDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQR 84 Query 64 VYETLKDQQ 72 + +K Q Sbjct 85 IDPAIKAPQ 93 >sp|Q61655|DD19A_MOUSE ATP-dependent RNA helicase DDX19A OS=Mus musculus OX=10090 GN=Ddx19a PE=1 SV=2 Length=478 Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 115/437 (26%), Positives = 191/437 (44%), Gaps = 108/437 (25%) Query 256 VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L++ P I +SQ SG A +++ + P+ L + P+ ELA QT I+ Sbjct 124 MMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTGKVIE 182 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK-LNLSQVRF 366 Q K+ +P+L+ + G V E IV+GTPG + D S K ++ +++ Sbjct 183 QMGKF--HPELKLAYAVRGNKLERGQKVSEQ---IVIGTPGTVLDWCSKLKFIDPKKIKV 237 Query 367 LVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 VLDEAD ++ +QG+ D R+ +P + Q+++ SAT V K ++K++ Sbjct 238 FVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPD 290 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P + LK E+ DT+ V N + ++ Sbjct 291 PNIIKLKREEETLDTIKQYYVLCNNREEKF------------------------------ 320 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 +A+ L G + QA+IFC T+ L K+GHQ + L Sbjct 321 -QALCNLYGAITIA--------QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L 362 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNY 599 G+ +R +ERF++G + L+ T+V ARGID+ V VIN LP +K + Y Sbjct 363 SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETY 422 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 +HRIGR GR + GLA+++V ++ + M +L Sbjct 423 LHRIGRTGRFGKRGLAVNMVDSK-------------------------------HSMNIL 451 Query 660 SEIEEHLNCTISQVEPD 676 + I+EH N I +++ D Sbjct 452 NRIQEHFNKKIERLDTD 468 Score = 39.7 bits (91), Expect = 0.089, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 39/64 (61%), Gaps = 2/64 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPV 60 +F E+ + P++ Q V M + P+ IQ ++P++L +++ +++G+GKT AF + + Sbjct 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAM 151 Query 61 IQIV 64 + V Sbjct 152 LSRV 155 >sp|Q2U6P7|SUB2_ASPOR ATP-dependent RNA helicase sub2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=sub2 PE=3 SV=1 Length=441 Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 105/353 (30%), Positives = 165/353 (47%), Gaps = 60/353 (17%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +P L++ +RELA Q N +F KY+ P ++ + GG + + VL N Sbjct 119 QLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPIQKDVEVLSN 176 Query 339 G---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 +IVVGTPGRL+ LV KL+L V+ VLDE D +L Q + R +I + T Sbjct 177 KESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQID---MRRDVQEIFRAT 233 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K QV++ SATL S +++ + +K M P V + +D T+H Sbjct 234 PADK--QVMMFSATL-SQEIRPVCKKFMRNPLEVYV--DDDTKLTLHG------------ 276 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 L + +I+ SEA K K + +++ +Q IIF ++ Sbjct 277 ---LQQYYIK-------------------LSEAEKNRKLNELLDSLE---FNQVIIFVKS 311 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + + L++ + F + +H ER + + FK+ + R + TDV Sbjct 312 TLRANELDKLL---------RECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 362 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK-EKVW 627 RGIDI + IN LP + +Y+HR+GR GR GL+IS V+ E+ EKV Sbjct 363 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEEDEKVL 415 Score = 33.1 bits (74), Expect = 9.9, Method: Compositional matrix adjust. Identities = 16/58 (28%), Positives = 31/58 (53%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 60 FRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTL 117 >sp|Q1E0Z3|DBP8_COCIM ATP-dependent RNA helicase DBP8 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP8 PE=3 SV=1 Length=536 Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 104/342 (30%), Positives = 153/342 (45%), Gaps = 64/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+RELA Q +QFK L+ +LI GG R Q L +V+ TPG Sbjct 177 AVVLTPTRELALQIF---EQFKAISAPQSLKPVLITGGSEMRPQAIALSTRPHVVIATPG 233 Query 349 RLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 RL D + T + L++VR +VLDEAD LL+ G + + + + R Q + Sbjct 234 RLADHIKTSGQDTIYGLNRVRMVVLDEADRLLASGPGSMLPDVETCLSALPPSTSR-QTL 292 Query 405 VCSATLHSFDVKKLS------EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + +AT+ + +V+ L +++ F T + + ++P T+ + V P T R E Sbjct 293 LFTATV-TQEVRALKSMPRPKDRLPIFVTEISTENNTTIPPTLKQCYLQV-PMTHR--EA 348 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC-RTKI 517 + TD ANS + AIIFC RTK Sbjct 349 FLHVLLSTD-----------ANSSK------------------------PAIIFCNRTKT 373 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + GH+ + LH ER NL RF+ R L+ TDVAAR Sbjct 374 ADLLDRLLR--------RLGHRVTS--LHSLLPQSERTSNLARFRASAARLLVATDVAAR 423 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 G+DI V V+N +P +Y+HR+GR RA R G AI+LV Sbjct 424 GLDIPSVGLVVNFDVPRNPDDYIHRVGRTARAGREGEAITLV 465 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 0/60 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++FS +G+ P + ++ M PT IQ IP IL G D + + TGSGKT AF+ P++ Sbjct 106 SSFSSLGLAPWLVGSLSAMAIRRPTAIQRACIPEILKGRDCIGGSRTGSGKTVAFAAPIL 165 >sp|A2R0B5|SUB2_ASPNC ATP-dependent RNA helicase sub2 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=sub2 PE=3 SV=1 Length=440 Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 105/353 (30%), Positives = 165/353 (47%), Gaps = 60/353 (17%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +P L++ +RELA Q N +F KY+ P ++ + GG + + +L N Sbjct 118 QLEPVPGECSILVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPIQKDVELLSN 175 Query 339 G---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 +IVVGTPGRL+ LV KL+L V+ VLDE D +L Q + R +I + T Sbjct 176 KESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQID---MRRDVQEIFRAT 232 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K QV++ SATL S +++ + +K M P V + +D T+H Sbjct 233 PADK--QVMMFSATL-SQEIRPVCKKFMRNPLEVYV--DDDTKLTLHG------------ 275 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 L + +I+ SEA K K + +++ +Q IIF ++ Sbjct 276 ---LQQYYIK-------------------LSEAEKNRKLNELLDSLE---FNQVIIFVKS 310 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + + L++ + F + +H ER + + FK+ + R + TDV Sbjct 311 TLRANELDKLL---------RECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 361 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE-KEKVW 627 RGIDI + IN LP + +Y+HR+GR GR GL+IS V+TE EKV Sbjct 362 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTEDDEKVL 414 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 16/58 (28%), Positives = 31/58 (53%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 59 FRDFLLKEELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTL 116 >sp|Q8GUG7|RH50_ARATH DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana OX=3702 GN=RH50 PE=2 SV=2 Length=781 Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 96/336 (29%), Positives = 146/336 (43%), Gaps = 44/336 (13%) Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +K P P+ +++ P+ ELA Q L N + K R +++ GG R QL LE G Sbjct 445 SKSSPGCPRVIVLVPTAELASQVLANCRSISK--SGVPFRSMVVTGGFRQRTQLENLEQG 502 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 VD+++ TPGR L++ G L LS +R +LDE D L G +F + N I S Sbjct 503 VDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILF--GDDEFEAALQNLI---NSSPV 557 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q + +ATL P + K + PD V + P+ R+ L Sbjct 558 TAQYLFVTATL---------------PLEIYNKLVEVFPD----CEVVMGPRVHRVSNAL 598 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + + D DN +PE + K ++ ++E+ + + IIFC C Sbjct 599 EEFLV---DCSGDDN---AEKTPETAFQNKKTA----LLQIMEENPVSKTIIFCNKIETC 648 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG----DVRFLICTDVA 575 +E F + D+K Q + H R N++ F + FL+CTD A Sbjct 649 RKVENIFKRV----DRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRA 704 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +RGID GV +V+ P + YV R+GR R R Sbjct 705 SRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGAR 740 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/63 (35%), Positives = 41/63 (65%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G ++ +A++E ++ P IQA + ++ G ++A ++GSGKT A+ +PVIQ Sbjct 376 FAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQR 435 Query 64 VYE 66 + E Sbjct 436 LRE 438 >sp|A1D1R8|DRS1_NEOFI ATP-dependent RNA helicase drs1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=drs1 PE=3 SV=1 Length=819 Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 107/385 (28%), Positives = 169/385 (44%), Gaps = 64/385 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + I+ P+RELA Q N + + D + ++GG + R+Q ++L+ D+++ TP Sbjct 372 RVAILMPTRELAVQCYNVATKLATHTD---ITFCQLVGGFSLREQENILKKRPDVIIATP 428 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + + LVLDEAD +L G++D +N + IPQ Q ++ Sbjct 429 GRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIPQSR------QTMLF 482 Query 407 SATLHSFDVKKLSEKIMHFPT--WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT+ V KL ++ P VD K S+ T V RL Sbjct 483 SATMTD-SVDKLIRVGLNRPVRLMVDSKKNTSMNLTQEFV-------------RL----- 523 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 RPG + Y + E + I+F R K + + Sbjct 524 -----------RPGREDKRLG----------YLLYLCNEIYTGRVIVFFRQKREAHRVRI 562 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F G LHG +R +++E F++G V FL+ TD+A+RG+DI GV Sbjct 563 VFGLLG---------LKAAELHGSMSQEQRIKSVENFREGKVAFLLATDLASRGLDIKGV 613 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK-VWYHVCSSRGKGC-YNTR 642 VIN P + Y+HR+GR RA R G A ++ A K V V + + +G +R Sbjct 614 ETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKIVKSAVKAGKAQGAKIVSR 673 Query 643 LKEDGGCTIWYNEMQ-LLSEIEEHL 666 + + W + + L EIEE L Sbjct 674 VVDPAVADEWAAKAKGLEDEIEEVL 698 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P+++ Sbjct 300 SFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 359 >sp|Q6CIR0|DBP10_KLULA ATP-dependent RNA helicase DBP10 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP10 PE=3 SV=1 Length=973 Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 97/346 (28%), Positives = 158/346 (46%), Gaps = 33/346 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QT K+F K D LR +L+ GG + DQ ++ D+V+ TP Sbjct 198 RAVILSPSRELAIQTHRVFKEFSKGSD---LRSILLTGGDSLEDQFGMMMGNPDVVIATP 254 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+L V ++V DEAD L G+ + +N + P Q ++ S Sbjct 255 GRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLVAFPT------NRQTLLFS 308 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR------LWERLGK 461 ATL S V ++ + P V L E + + + + + + K +R L + K Sbjct 309 ATLPSSLVD-FAKAGLSNPVLVRLDAETKISENLEMLFISIK-KDEREANLLYLLQEAIK 366 Query 462 SHIRTDD----VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM---DQAIIFCR 514 + T+ + +++ ++ E + + R ++M I+F Sbjct 367 MPVATESQIKKLKQQNDADSDSDDSEDEKKKKAKKAKKSKRRLPNANEMPSEKATIVFVP 426 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 T+ + + Q G + ++G H RKQ L F+ G L+ TDV Sbjct 427 TRHHVEYVTQLLKNCG---------YLVSYIYGALNQHARKQQLYNFRAGLTSILVVTDV 477 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 AARG+DI + VIN +LP + ++HR+GR RA G A S+V+ Sbjct 478 AARGVDIPLLANVINYSLPGSSKIFIHRVGRTARAGNRGWAFSIVS 523 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ + + + + PT IQ ++IPLIL D++ A TGSGKT AF +P+I+ Sbjct 127 SFASFGLSKLVLINISKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIE 186 >sp|Q1EB85|DBP5_COCIM ATP-dependent RNA helicase DBP5 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP5 PE=3 SV=1 Length=495 Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 94/351 (27%), Positives = 153/351 (44%), Gaps = 73/351 (21%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 +P+AL++ PSRELA Q + I+ +++ L + + IVVG Sbjct 165 SPQALVLAPSRELARQIVGVIQAMGTFVEG------LFVATAVPMEMNRNQRVEASIVVG 218 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPG + DL+ N +R LVLDEAD +L QG D R+ + +P + +QV+ Sbjct 219 TPGTVQDLIKKRLFNTQHLRVLVLDEADNMLDQQGLGDQCIRVKSLLP------RTIQVV 272 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT F V + + K + LK E+ + + + + Sbjct 273 LFSATFPDF-VVRYAHKFAPNSNQLTLKHEELTVEGIKQLYLDCE--------------- 316 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 D H K E V+ + +IIF +T+ +E+ Sbjct 317 --SDEH----------------------KYEILVKFYGLLTIGSSIIFVKTRASAAEIER 352 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + +G + V L G + +R + ++RF+ G + LI T+V ARGID+ V Sbjct 353 RMVAEG---------HTVVSLTGGIEGQKRDEIIDRFRNGTAKVLITTNVLARGIDVSTV 403 Query 585 PYVINVTLPD-----------EKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VIN +P+ + Q Y+HRIGR GR R+G+A+S V+ ++E Sbjct 404 SMVINYDIPELHLPGAARRMADAQTYLHRIGRTGRFGRVGVAVSFVSNQEE 454 Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust. Identities = 18/63 (29%), Positives = 37/63 (59%), Gaps = 2/63 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAA--ETGSGKTGAFSI 58 + +F E+G+ I + +M++ P+ IQ ++PL++ M A ++G+GKT AF + Sbjct 91 IKSFEELGLAEPIQMGLSKMNFRRPSKIQERALPLLMANPPTNMIAQSQSGTGKTAAFVL 150 Query 59 PVI 61 ++ Sbjct 151 NIL 153 >sp|A7TK55|IF4A_VANPO ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=TIF1 PE=3 SV=1 Length=396 Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 100/337 (30%), Positives = 155/337 (46%), Gaps = 59/337 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ALI+ P+RELA Q + ++D ++ IGG + + L++ IVVG Sbjct 91 APQALILAPTRELALQIQKVVIALAFHMD---VKVHACIGGTSFVEDTEGLKDA-QIVVG 146 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + + ++ +LDEAD +LS G+ + I ++ +P T QV++ Sbjct 147 TPGRVSDNIQRHRFKTDNIKMFILDEADEMLSSGFREQIYQIFTMLPPTT------QVVL 200 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL DV +++ K M P + +K K + E + + +I Sbjct 201 LSATLPG-DVLEVTTKFMRNPIRILVK------------------KDELTLEGIKQFYIN 241 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 ++ K L Y ++ QA+IFC T+ + L Q Sbjct 242 VEEEQYK----------------FDCLSDLYDSISVT-----QAVIFCNTRRKVEELTQK 280 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + F+ ++ D ER ++ F+ G R LI TD+ ARGID+ V Sbjct 281 LTESN---------FTVSSIYSDLPQQERDVIMKEFRSGSSRILISTDLLARGIDVQQVS 331 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 VIN LP K+NY+HRIGR GR R G+AI+ V E Sbjct 332 LVINYDLPTNKENYIHRIGRGGRFGRKGVAINFVTNE 368 Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust. Identities = 24/69 (35%), Positives = 39/69 (57%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + E+ + V + P+ IQ +I I+ DVL A++G+GKTG FSI +Q Sbjct 25 FDDMNLKDELLKGVYGYGFEEPSAIQQRAILPIVEEHDVLAQAQSGTGKTGTFSIAALQR 84 Query 64 VYETLKDQQ 72 + ++K Q Sbjct 85 IDSSIKAPQ 93 >sp|Q6BQ61|RRP3_DEBHA ATP-dependent rRNA helicase RRP3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=RRP3 PE=3 SV=2 Length=477 Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 101/349 (29%), Positives = 152/349 (44%), Gaps = 62/349 (18%) Query 290 LIVEPSRELAEQTLNNIKQ-FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 L++ P+RELA Q IK+ F + LR + I+GG+ DQ L I+V TPG Sbjct 137 LVLAPTRELAYQ----IKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPHILVATPG 192 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R +D L T +L +++LV+DEAD LL + ++++ IP + + S Sbjct 193 RIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKIIPTQRT------TYLFS 246 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + + KL +H P V + + D L +S + Sbjct 247 ATMTN-KIAKLQRASLHNPVRVAVSNKYQTADN------------------LVQSMMLVS 287 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 D + K Y + + E IIF RT C + Sbjct 288 DGY----------------------KNTYLIHLLNEFLGKSIIIFTRT---CAH------ 316 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q + FS V LHG +R +L +FK G LI TDVAARG+DI V V Sbjct 317 SQRTALLARILGFSAVPLHGQLTQAQRLGSLNKFKAGKANILIATDVAARGLDIPSVDIV 376 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 IN +P + + Y+HR+GR RA + G +ISL+ +++ + S GK Sbjct 377 INYDIPTDSKAYIHRVGRTARAGKSGKSISLITQYDLEMYLRIESVLGK 425 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 50/64 (78%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+E+ ++PE+ +A+++M + PT IQ+E+IP L G D++ A+TGSGKT AF+IP++Q Sbjct 66 SFNELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQ 125 Query 63 IVYE 66 ++E Sbjct 126 ALWE 129 >sp|A5E6W6|RRP3_LODEL ATP-dependent rRNA helicase RRP3 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=RRP3 PE=3 SV=1 Length=504 Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 109/385 (28%), Positives = 175/385 (45%), Gaps = 75/385 (19%) Query 277 VTQTKFLPNAPK-ALIVEPSRELAEQTLNNIKQ-FKKYIDNPKLRELLIIGGVAARDQLS 334 + QT + P AL++ P+RELA Q IK+ F + LR + IIGG++ +Q Sbjct 156 ILQTLYTAAQPYYALVLAPTRELAFQ----IKETFDALGSSMGLRSVCIIGGMSMMEQAR 211 Query 335 VLENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 L +++ TPGRL D L T +L ++++LV+DE D ++ Y+ I+++ QIP Sbjct 212 DLMRKPHVIIATPGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIP- 270 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 +R+ + +AT+ S +++K ++ ++ P V++ + VPD + + +P T Sbjct 271 ---SHQRITYLY-TATM-SREIEKF-KRSLNSPVQVEIVKLEKVPDKLKQTMCLTSPNT- 323 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 K ++ + M + IIF Sbjct 324 ---------------------------------------KDTRLIQIVNLDSMKRVIIFT 344 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 RT + + G F CV LHG R + +FK G L+ TD Sbjct 345 RTVVHTRRCCLMLLNLG---------FKCVELHGQMPQSRRLGAINKFKAG-TPILVATD 394 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 VAARG+DI V VIN +PD Y+HR+GR RA + G AISLV + + + ++ Sbjct 395 VAARGLDIPAVDLVINYDIPDPTL-YIHRVGRTARAGKAGKAISLVTQYDLESYLRIENT 453 Query 634 RGKGCYNTRL-KEDGGCTIWYNEMQ 657 G T+L KED + +EMQ Sbjct 454 LG-----TKLPKED----LPLDEMQ 469 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 46/63 (73%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+E ++PE+ ++++ + + PT IQA +IP L G D++ AETGSGKT AF+IP++Q Sbjct 99 SFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQ 158 Query 63 IVY 65 +Y Sbjct 159 TLY 161 >sp|Q8X0X2|DBP5_NEUCR ATP-dependent RNA helicase dbp-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-5 PE=3 SV=1 Length=483 Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 97/347 (28%), Positives = 160/347 (46%), Gaps = 74/347 (21%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV--D 341 P+ P+AL++ PSRELA Q ++ ++ +N + E I G ++ E GV Sbjct 143 PHQPQALLLAPSRELARQIQTVVQTIGQFCEN-LIVEAAIPGAISR-------ETGVRGS 194 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKR 400 +VVGTPG + DLV + ++SQ++ LV+DEAD +L QG D R+ N +P K Sbjct 195 VVVGTPGTVMDLVKRRQFDISQLKVLVIDEADNMLDQQGLGDQCVRVKNMLP------KT 248 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 +Q+++ SAT +K++ F +R Sbjct 249 IQILLFSAT--------FPDKVLRF--------------------------AERFAPNAN 274 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + ++ ++ K ++ + P + IL Y + I ++IF RT+ + Sbjct 275 QMKLKHKELTVKGISQMFMDCP-TEKDKYDILCKLYGLMTI-----GSSVIFVRTRETAN 328 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +++ + GH+ S LHG + R L+ F+ G + LI T+V ARGID Sbjct 329 EIQKRM-------EADGHKVS--ALHGAYEGQSRDVLLDEFRSGRSKVLITTNVLARGID 379 Query 581 IHGVPYVINVTLP--------DEKQNYVHRIGRVGRAERMGLAISLV 619 + V VIN +P + + Y+HRIGR GR R+G++IS V Sbjct 380 VSSVSMVINYDIPMKGPGEREPDAETYLHRIGRTGRFGRVGVSISFV 426 Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/63 (24%), Positives = 40/63 (63%), Gaps = 2/63 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSI 58 +++F E+G+ + + + +++ P+ +Q + +PL+L +++ +++G+GKT AF + Sbjct 73 VSSFDELGLPEAVNRGLLAINFKKPSKVQEKCLPLMLSDPPRNMIAQSQSGTGKTAAFVL 132 Query 59 PVI 61 V+ Sbjct 133 TVL 135 >sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=rrp3 PE=3 SV=1 Length=472 Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 101/364 (28%), Positives = 156/364 (43%), Gaps = 59/364 (16%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P + LI+ P+RELA Q + + I+ +R +I+GG+ Q L I+ Sbjct 118 PQSFFGLILAPTRELAFQISKSFESLGSTIN---VRCAVIVGGMDMVSQSIALGKKPHII 174 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T +L +++LV+DEAD LL + ++++ +P + + Sbjct 175 VATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKVLP------RERR 228 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V+ L + P V SV + V L +S Sbjct 229 TFLFSATMSS-KVESLQRASLSNPLRV------SVSSNKYQTV-----------STLLQS 270 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 ++ H K Y V + E IIF RT + + Sbjct 271 YLFLPHKH----------------------KDIYLVYLLNEFVGQSTIIFTRTVHETQRI 308 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 F+ + G F + LHG R L +F+ L+ TDVAARG+DI Sbjct 309 S--FLLRSLG-------FGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIP 359 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V V+N LP + + YVHR+GR RA + G+AIS V ++W + + GK Sbjct 360 SVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWLRIEGALGKKLKEYE 419 Query 643 LKED 646 L++D Sbjct 420 LEKD 423 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++G++ ++ +A E M + PT IQAESIPL L G D++ AETGSGKT AF++P++Q Sbjct 53 SFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 112 Query 63 IVYE 66 + E Sbjct 113 ALME 116 >sp|Q6FKN8|DBP5_CANGA ATP-dependent RNA helicase DBP5 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP5 PE=3 SV=1 Length=504 Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 113/381 (30%), Positives = 174/381 (46%), Gaps = 73/381 (19%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 PP++ +A S++ G + ++V +T+ N P+A+ + PSRELA QTL I++ Sbjct 152 PPRN-MIAQSQSGTGKTAAFSLTMLSRVDETQ---NVPQAICLAPSRELARQTLEVIQEM 207 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 KY K+ LI+ ++ + ++VVGTPG L DL+ + L V+ VL Sbjct 208 GKYT---KITTQLIVPDSFEKNT----KINANVVVGTPGTLLDLIRRKLIQLQNVKIFVL 260 Query 370 DEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 DEAD +L QG D R+ +P+ T Q+++ SAT VK ++K++ Sbjct 261 DEADNMLDKQGLGDQCIRVKKFLPKDT------QLVLFSATFADA-VKAYAQKVIPNANT 313 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 ++L+ + + + + N D+ H E+ E Sbjct 314 LELQRNEVNVKAIKQLYMDCN-----------------DEAHKY----------EVLCEL 346 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 +L + +IIF K D NL G +GHQ S LH D Sbjct 347 YGLLT------------IGSSIIFVAKK-DTANL------LYGKLKHEGHQVSI--LHSD 385 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHR 602 + ER + ++ F++G + LI T+V ARGIDI V V+N LP + YVHR Sbjct 386 LRTDERDRLIDDFREGRSKVLITTNVLARGIDIPSVSMVVNYDLPTLPNGMPDYATYVHR 445 Query 603 IGRVGRAERMGLAISLVATEK 623 IGR GR R G+AIS V +K Sbjct 446 IGRTGRFGRTGVAISFVHDKK 466 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/69 (32%), Positives = 44/69 (64%), Gaps = 2/69 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSI 58 + +F E+G+ PE+ + + M + P+ IQ ++PL+L +++ +++G+GKT AFS+ Sbjct 113 VKSFDELGLSPELLKGIYAMKFQKPSKIQERALPLLLSNPPRNMIAQSQSGTGKTAAFSL 172 Query 59 PVIQIVYET 67 ++ V ET Sbjct 173 TMLSRVDET 181 >sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana OX=3702 GN=RH21 PE=2 SV=1 Length=733 Score = 117 bits (292), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 95/355 (27%), Positives = 158/355 (45%), Gaps = 64/355 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA+Q +F Y+ R I+GG + +Q + G +IV+ T Sbjct 390 PYAVVMAPTRELAQQIEEETVKFAHYLG---FRVTSIVGGQSIEEQGLKITQGCEIVIAT 446 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ---------VTSD 397 PGRL D + L+Q ++VLDEAD ++ G+ + + + +P D Sbjct 447 PGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMPSSNLKPENEEEELD 506 Query 398 GKRL--QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K++ + SAT+ V++L+ K + P V + D + V+ Sbjct 507 EKKIYRTTYMFSATMPP-GVERLARKYLRNPVVVTIGTAGKTTDLISQHVI--------- 556 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 M E+ K + + + + E AI+F T Sbjct 557 ----------------------------MMKESEKFFRLQKLLDELGEK---TAIVFVNT 585 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K +CD++ + DK G++ + LHG + +R+ +LE F+ L+ TDV Sbjct 586 KKNCDSIAKNL-------DKAGYRVTT--LHGGKSQEQREISLEGFRAKRYNVLVATDVV 636 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 RGIDI V +VIN +P + Y HRIGR GRA + G+A S + +V+Y + Sbjct 637 GRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDL 691 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/64 (41%), Positives = 39/64 (61%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E + E+ +AVE + P+ IQ +IPL L DV+ AETGSGKT AF +P+ Sbjct 312 MRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 371 Query 61 IQIV 64 + + Sbjct 372 LAYI 375 >sp|A5A6N4|IF4A1_PANTR Eukaryotic initiation factor 4A-I OS=Pan troglodytes OX=9598 GN=EIF4A1 PE=2 SV=1 Length=406 Score = 114 bits (284), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 112/398 (28%), Positives = 179/398 (45%), Gaps = 65/398 (16%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQ 308 P G+ +++A G K+ + + Q + A +AL++ P+RELA+Q + Sbjct 64 LPCIKGYDVIAQAQSG-TGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMA 122 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 Y+ IGG R ++ L+ I+VGTPGR+ D+++ L+ ++ Sbjct 123 LGDYMGASCHA---CIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMF 179 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDEAD +LS+G+ D I + ++ T QV++ SAT+ S DV ++++K M P Sbjct 180 VLDEADEMLSRGFKDQIYDIFQKLNSNT------QVVLLSATMPS-DVLEVTKKFMRDPI 232 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + +K E+ + + + V ER E W Sbjct 233 RILVKKEELTLEGIRQFYINV--------ER------------------------EEWK- 259 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + L Y I QA+IF T+ D L + F+ +HG Sbjct 260 -LDTLCDLYETLTIT-----QAVIFINTRRKVDWLTEKM---------HARDFTVSAMHG 304 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 D ER + F+ G R LI TD+ ARGID+ V VIN LP ++NY+HRIGR G Sbjct 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 R R G+ I++V E ++ + + YNT ++E Sbjct 365 RFGRKGVTINMVTEEDKRTLRDI-----ETFYNTSIEE 397 Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 33 SFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQ 92 Query 63 IVYETLKDQQ 72 + LK Q Sbjct 93 QIELDLKATQ 102 >sp|Q2FY15|CSHB_STAA8 DEAD-box ATP-dependent RNA helicase CshB OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=cshB PE=3 SV=1 Length=448 Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 99/402 (25%), Positives = 178/402 (44%), Gaps = 71/402 (18%) Query 287 PKALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+A++V P+RELA+Q N++ QFK + + IGG ++ Sbjct 73 PQAIVVAPTRELAQQLYDAANHLSQFKAGVSVK-----VFIGGTDIEKDRQRCNAQPQLI 127 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +GTP R++DL TG L++ +LV+DEAD ++ G + ++ + ++ + + Sbjct 128 IGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDVDYIAARLEDNAN------I 181 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 V SAT+ ++ K + P +V + + + ++P Sbjct 182 AVFSATIPQ-QLQPFLNKYLSHPEYVAVDSKKQNKKNIEFYLIPTK-------------- 226 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 GA E I IL IIFC ++ + ++L Sbjct 227 --------------GAAKVEKTLNLIDILNPYLC------------IIFCNSRDNANDLA 260 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + G +HG P ERKQ ++R + + +++I +D+A+RGIDI G Sbjct 261 RSLNEAG---------IKVGMIHGGLTPRERKQQMKRIRNLEFQYVIASDLASRGIDIEG 311 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG-CYNTR 642 V +VIN +P++ + HR+GR GR G+AI+L + ++E +++ +G +NT Sbjct 312 VSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEE---HNISLIEDRGFVFNTV 368 Query 643 LKEDGGC--TIWYNEMQLLSEIEEHL-NCTISQVEPDIKVPV 681 +DG +N+ Q ++HL N ++V IK V Sbjct 369 DIKDGELKEVKAHNQRQARMRKDDHLTNQVKNKVRSKIKNKV 410 Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 44/69 (64%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + + AV+++++ PT+IQ IP IL +++ ++TG+GK+ AF +P++Q+ Sbjct 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65 Query 64 VYETLKDQQ 72 + +K+ Q Sbjct 66 IDSEIKEPQ 74 >sp|Q5GUR8|RHLB_XANOR ATP-dependent RNA helicase RhlB OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) OX=291331 GN=rhlB PE=3 SV=2 Length=574 Score = 116 bits (290), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 102/336 (30%), Positives = 155/336 (46%), Gaps = 58/336 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ALI+ P+RELA Q + +F + LR L+ GGV Q +L+ GVD++ Sbjct 82 PEDPRALILAPTRELAIQIHKDAVKFGADLG---LRFALVYGGVDYDKQRELLQQGVDVI 138 Query 344 VGTPGRLDDLVSTGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D V K+ +L VLDEAD + G+ I + ++P+ G R Q Sbjct 139 IATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPE---RGTR-Q 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL S V +L+ + M+ P + ++ E R+ +R+ Sbjct 195 TLLFSATL-SHRVLELAYEHMNEPEKLVVETETIT--------------AARVRQRI--- 236 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + +DD E + + +L R + +F TK + + Sbjct 237 YFPSDD--------------EKQTLLLGLLSRSEGARTM---------VFVNTKAFVERV 273 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + + H + L GD +R+ L RF+KG + L+ TDVAARG+ I Sbjct 274 ARTL---------ERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHID 324 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 GV YV N LP + ++YVHRIGR R G AIS Sbjct 325 GVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF 360 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 34/58 (59%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 11 FSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVM 68 >sp|A6SBT4|DBP5_BOTFB ATP-dependent RNA helicase dbp5 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp5 PE=3 SV=1 Length=470 Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/349 (28%), Positives = 158/349 (45%), Gaps = 71/349 (20%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+AL + PSRELA Q I+ +++D + + I G V +++ + +V Sbjct 138 PTTPQALCLAPSRELARQIEGVIRSIGQFVDGLTV-QAAIPGAVERNAKVNAM-----VV 191 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQ 402 VGTPG + DL+ ++ SQ++ L LDEAD +L QG D R+ + I + Q Sbjct 192 VGTPGTVMDLIKRRSIDASQMKILCLDEADNMLDQQGLGDQCMRVKSMI-------RVEQ 244 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 +++ SAT PD V+ +P+ + + Sbjct 245 ILLFSATF---------------------------PDEVYGFAQDFSPRANEI------- 270 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 ++ D++ + + P ++ K E V+ + +IIF + + N+ Sbjct 271 KLKRDELTVSGIKQMFMDCPN------EVGKYEILVKLYGLMTIGSSIIFVKRRDTASNI 324 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + K+GH+ + V HG + ER Q LE F++G + LI T+V ARGID+ Sbjct 325 AERLT-------KEGHKVAAV--HGAFEGSERDQVLEDFRQGKAKVLITTNVLARGIDVQ 375 Query 583 GVPYVINVTLPDE--------KQNYVHRIGRVGRAERMGLAISLVATEK 623 V VIN +P + + Y+HRIGR GR R+G++IS V K Sbjct 376 SVSMVINYDVPMKGRSDSDPPPETYLHRIGRTGRFGRVGVSISFVFDRK 424 Score = 37.7 bits (86), Expect = 0.35, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 38/60 (63%), Gaps = 2/60 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 F ++G+ I + + M++ P+ IQ +++PL+L +++ +++G+GKT AF I ++ Sbjct 71 FEQLGIDASILKGLYAMNFKKPSKIQEKALPLLLRNPPTNMIAQSQSGTGKTAAFVITIL 130 >sp|A1CMQ7|SUB2_ASPCL ATP-dependent RNA helicase sub2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=sub2 PE=3 SV=1 Length=441 Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 101/356 (28%), Positives = 161/356 (45%), Gaps = 60/356 (17%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +P L++ +RELA Q N +F KY+ P ++ + GG + + VL N Sbjct 119 QLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPIQKDVEVLSN 176 Query 339 G---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 +IVVGTPGRL+ LV KL+L V+ VLDE D +L Q + R +I + T Sbjct 177 KESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQID---MRRDVQEIFRAT 233 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K QV++ SATL S +++ + +K M P V + +D T+H + + Sbjct 234 PADK--QVMMFSATL-SQEIRPICKKFMRNPLEVYV--DDDTKLTLHGL--------QQY 280 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + +L +S K + + +Q IIF ++ Sbjct 281 YIKLSESE-----------------------------KNRKLNELLDSLEFNQVIIFVKS 311 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + + L++ + F + +H ER + + FK+ + R + TDV Sbjct 312 TLRANELDKLL---------RECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 362 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE-KEKVWYHV 630 RGIDI + IN LP + +Y+HR+GR GR GL+IS V+ E EKV + Sbjct 363 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEDDEKVLKEI 418 >sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DRS1 PE=3 SV=1 Length=686 Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 90/335 (27%), Positives = 159/335 (47%), Gaps = 58/335 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + KA+I+ P+RELA Q + ++ +++ N L + +GG++ + Q L+ DIV+ Sbjct 266 STKAIILTPTRELAIQVHDVGRKLGQFVSN--LNFGMAVGGLSLKQQEQQLKTRPDIVIA 323 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + ++ ++ V+ L++DEAD +L +G+ + + + + IP+ ++ Q + Sbjct 324 TPGRLIDHIRNSPSFSVEDVQVLIIDEADRMLEEGFQEELTEILSLIPK-----QKRQTL 378 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+++ ++ L + ++ P V + +V + V + R E L Sbjct 379 LFSATMNNTKIQDLVQLSLNKPIKVSIDPPRTVASKLEQQFVRI-----RKREEL----- 428 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 P + +K L+G + ++F RTK++ Sbjct 429 ----------------KPAVLYLLLKKLEG-------------RTVVFTRTKVEA----- 454 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + LHG +R N++ F K +V LICTD+AARG+DI + Sbjct 455 ----HKLRIILGLLGLTVAELHGALTQEQRLANVKAF-KNNVNVLICTDLAARGLDIR-I 508 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 YVIN +P + Y HR+GR RA R G +IS V Sbjct 509 EYVINYDMPKTYEIYTHRVGRTARAGRKGTSISFV 543 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 43/60 (72%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E+ + I ++++++ + +PT +QA +IP+ L G D++ +A+TGSGKT A+ IP+I+ Sbjct 197 TFQELQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKDIVASAQTGSGKTAAYLIPIIE 256 >sp|Q40469|IF4A6_TOBAC Eukaryotic initiation factor 4A-6 (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=253 Score = 110 bits (274), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/304 (28%), Positives = 137/304 (45%), Gaps = 60/304 (20%) Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++ Sbjct 2 VVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKI 55 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 QV + SAT+ + +++ K M+ P + +K ++ + + V V+ Sbjct 56 QVGIFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDK----------- 103 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 E W ++ L Y AI Q++IF T+ D Sbjct 104 ---------------------EEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDW 135 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L +G + HGD + R + F+ G R LI TD+ ARGID+ Sbjct 136 LTDKM---------RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDV 186 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 V VIN LP + +NY+HRIGR GR R G++I+ V + E++ + + + YN Sbjct 187 QQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTKDDERMLFDI-----QKFYNV 241 Query 642 RLKE 645 ++E Sbjct 242 VIEE 245 >sp|A1CNV8|DRS1_ASPCL ATP-dependent RNA helicase drs1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=drs1 PE=3 SV=1 Length=826 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 92/340 (27%), Positives = 151/340 (44%), Gaps = 57/340 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + I+ P+RELA Q N + + D + ++GG + R+Q ++L+ D+++ TP Sbjct 379 RVAILMPTRELAVQCYNVATKLATHTD---VTFCQLVGGFSLREQENILKKRPDVIIATP 435 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + + LVLDEAD +L G++D +N + IP K Q ++ Sbjct 436 GRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIP------KSRQTMLF 489 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ V KL ++ P + + + + + V + P R +RLG Sbjct 490 SATMTD-SVDKLIRVGLNRPVRLMVDSKKNTSMNLTQEFVRLRPG--REGKRLG------ 540 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 Y + E + I+F R K + + F Sbjct 541 -----------------------------YLLYLCSEIFTGRVIVFFRQKKEAHRVRIVF 571 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G LHG +R +++E F++G V FL+ TD+A+RG+DI GV Sbjct 572 GLLG---------LKAAELHGSMSQEQRIKSVESFREGKVAFLLATDLASRGLDIKGVET 622 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 VIN P + Y+HR+GR RA R G A ++ A KV Sbjct 623 VINYEAPQSHEIYLHRVGRTARAGRSGRACTIAADPDRKV 662 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P+++ Sbjct 307 SFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 366 >sp|A5DZX2|DBP5_LODEL ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP5 PE=3 SV=1 Length=511 Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 103/360 (29%), Positives = 161/360 (45%), Gaps = 97/360 (27%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ + + P+RELA QTL ++ KY + L++ R Q ++VG Sbjct 186 APQCICLAPTRELARQTLEVVETMGKY---SNITYQLVVPDSVPRGQAI----SAQVLVG 238 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPG + DL++ +N+++V+ VLDEAD +L +QG +D R+ ++P + Q++ Sbjct 239 TPGIVHDLINRKAINVAKVKVFVLDEADNMLDAQGLADTCLRVKKRLP------RDCQLV 292 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FPT V E VP+ Sbjct 293 LFSAT---------------FPTEVRKYAEKFVPN------------------------- 312 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKI--LKGEYAVRAIKEHKMD------------QAI 510 ANS + E + + +K Y +EHK + +I Sbjct 313 --------------ANSLALKQEELNVKGIKQLYMDCKNQEHKFEVLCELYGLLTIGSSI 358 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IF K D+L Y + ++GH S LHG + +R + ++ F++G + LI Sbjct 359 IFVEQKATADSL--YLRMK-----EEGHTVSI--LHGGLEVADRDRLIDDFREGRSKVLI 409 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQ------NYVHRIGRVGRAERMGLAISLVATEKE 624 T+V ARGIDI V V+N LP K+ Y+HRIGR GR R+G+++S VA EK+ Sbjct 410 TTNVLARGIDIATVSMVVNYDLPRTKEGRPDPSTYLHRIGRTGRFGRVGVSVSFVANEKD 469 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/74 (30%), Positives = 47/74 (64%), Gaps = 2/74 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ PE+ + + M + P+ IQ ++PL++ +++ +++G+GKT AFS+ Sbjct 115 VKSFEELGLKPELLKGLYAMKFNKPSKIQERALPLLISNPPKNMIGQSQSGTGKTAAFSL 174 Query 59 PVIQIVYETLKDQQ 72 ++ V E++K Q Sbjct 175 TMLSRVDESIKAPQ 188 >sp|Q810A7|DDX42_MOUSE ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3 Length=929 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/335 (29%), Positives = 147/335 (44%), Gaps = 57/335 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+IV P+REL +Q K+F K + LR + + GG + +Q L+ G +IVV Sbjct 325 DGPIAVIVCPTRELCQQIHAECKRFGKAYN---LRSVAVYGGGSMWEQAKALQEGAEIVV 381 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D V NL +V +LV DEAD + G+ + + + V D Q + Sbjct 382 CTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH---VRPD---RQTL 435 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT ++KL+ I+ P V V + N ++ E L Sbjct 436 LFSATFRK-KIEKLARDILIDPIRV-----------VQGDIGEANEDVTQIVEIL----- 478 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + P W+ + R ++ ++F K + + L Sbjct 479 --------------HSGPSKWNWLTR--------RLVEFTSSGSVLLFVTKKANAEELAS 516 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Q+G + LHGD ER + + FKK D+ L+ TDVAARG+DI + Sbjct 517 NLKQEG---------HNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSI 567 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN + + + HRIGR GRA G+A +L+ Sbjct 568 KTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLL 602 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + +P+ L G D++ A+TGSGKT AF P++ Sbjct 253 SSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPML 312 >sp|Q9LFN6|RH56_ARATH DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 PE=1 SV=2 Length=427 Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 100/341 (29%), Positives = 154/341 (45%), Gaps = 61/341 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DI 342 P AL++ +RELA Q N +F Y+ + K+ + GGV + +L+N I Sbjct 112 PGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVS--VFYGGVNIKIHKDLLKNECPHI 169 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 VVGTPGR+ L L+L VR +LDE D +L S + R +I ++T K Q Sbjct 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDK--Q 224 Query 403 VIVCSATLHSFDVKKLSEKIMHFP--TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 V++ SATL S +++ + +K M P +VD + + ++ V H + +L E + Sbjct 225 VMMFSATL-SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI--------KLSE-ME 274 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K+ D + A D +Q +IF ++ Sbjct 275 KNRKLNDLLDALD--------------------------------FNQVVIFVKSVSRAA 302 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + ++ F +C+H ER + FK+G R L+ TD+ RGID Sbjct 303 ELNKLLVECN---------FPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGID 353 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 I V VIN +PD Y+HR+GR GR GLAI+ VA+ Sbjct 354 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 394 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DV+ A++G GKT F + + Sbjct 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105 Query 62 Q 62 Q Sbjct 106 Q 106 >sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 PE=1 SV=3 Length=427 Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 100/341 (29%), Positives = 154/341 (45%), Gaps = 61/341 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DI 342 P AL++ +RELA Q N +F Y+ + K+ + GGV + +L+N I Sbjct 112 PGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVS--VFYGGVNIKIHKDLLKNECPHI 169 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 VVGTPGR+ L L+L VR +LDE D +L S + R +I ++T K Q Sbjct 170 VVGTPGRVLALAREKDLSLKNVRHFILDECDKMLE---SLDMRRDVQEIFKMTPHDK--Q 224 Query 403 VIVCSATLHSFDVKKLSEKIMHFP--TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 V++ SATL S +++ + +K M P +VD + + ++ V H + +L E + Sbjct 225 VMMFSATL-SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYI--------KLSE-ME 274 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K+ D + A D +Q +IF ++ Sbjct 275 KNRKLNDLLDALD--------------------------------FNQVVIFVKSVSRAA 302 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + ++ F +C+H ER + FK+G R L+ TD+ RGID Sbjct 303 ELNKLLVECN---------FPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGID 353 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 I V VIN +PD Y+HR+GR GR GLAI+ VA+ Sbjct 354 IERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVAS 394 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DV+ A++G GKT F + + Sbjct 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105 Query 62 Q 62 Q Sbjct 106 Q 106 >sp|Q9UMR2|DD19B_HUMAN ATP-dependent RNA helicase DDX19B OS=Homo sapiens OX=9606 GN=DDX19B PE=1 SV=1 Length=479 Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 114/437 (26%), Positives = 190/437 (43%), Gaps = 108/437 (25%) Query 256 VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L++ P I +SQ SG A ++Q + P+ L + P+ ELA QT I+ Sbjct 125 LMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIE 183 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK-LNLSQVRF 366 Q K+ P+L+ + G + E IV+GTPG + D S K ++ +++ Sbjct 184 QMGKFY--PELKLAYAVRGNKLERGQKISEQ---IVIGTPGTVLDWCSKLKFIDPKKIKV 238 Query 367 LVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 VLDEAD ++ +QG+ D R+ +P + Q+++ SAT V K ++K++ Sbjct 239 FVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPD 291 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P + LK E+ DT+ V + + ++ Sbjct 292 PNVIKLKREEETLDTIKQYYVLCSSRDEKF------------------------------ 321 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 +A+ L G + QA+IFC T+ L K+GHQ + L Sbjct 322 -QALCNLYGAITIA--------QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L 363 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNY 599 G+ +R +ERF++G + L+ T+V ARGID+ V VIN LP +K + Y Sbjct 364 SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETY 423 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 +HRIGR GR + GLA+++V ++ + M +L Sbjct 424 LHRIGRTGRFGKRGLAVNMVDSK-------------------------------HSMNIL 452 Query 660 SEIEEHLNCTISQVEPD 676 + I+EH N I +++ D Sbjct 453 NRIQEHFNKKIERLDTD 469 Score = 40.8 bits (94), Expect = 0.049, Method: Compositional matrix adjust. Identities = 19/64 (30%), Positives = 39/64 (61%), Gaps = 2/64 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG--GGDVLMAAETGSGKTGAFSIPV 60 +F E+ + P++ Q V M + P+ IQ ++PL+L +++ +++G+GKT AF + + Sbjct 93 SFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAM 152 Query 61 IQIV 64 + V Sbjct 153 LSQV 156 >sp|Q86XP3|DDX42_HUMAN ATP-dependent RNA helicase DDX42 OS=Homo sapiens OX=9606 GN=DDX42 PE=1 SV=1 Length=938 Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 96/335 (29%), Positives = 147/335 (44%), Gaps = 57/335 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+IV P+REL +Q K+F K + LR + + GG + +Q L+ G +IVV Sbjct 325 DGPIAVIVCPTRELCQQIHAECKRFGKAYN---LRSVAVYGGGSMWEQAKALQEGAEIVV 381 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D V NL +V +LV DEAD + G+ + + + V D Q + Sbjct 382 CTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH---VRPD---RQTL 435 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT ++KL+ I+ P V V + N ++ E L Sbjct 436 LFSATFRK-KIEKLARDILIDPIRV-----------VQGDIGEANEDVTQIVEIL----- 478 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + P W+ + R ++ ++F K + + L Sbjct 479 --------------HSGPSKWNWLTR--------RLVEFTSSGSVLLFVTKKANAEELAN 516 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Q+G + LHGD ER + + FKK D+ L+ TDVAARG+DI + Sbjct 517 NLKQEG---------HNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSI 567 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN + + + HRIGR GRA G+A +L+ Sbjct 568 KTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLL 602 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + +P+ L G D++ A+TGSGKT AF P++ Sbjct 253 SSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPML 312 >sp|Q7ZY47|DDX42_XENLA ATP-dependent RNA helicase DDX42 OS=Xenopus laevis OX=8355 GN=ddx42 PE=2 SV=1 Length=947 Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 94/340 (28%), Positives = 150/340 (44%), Gaps = 59/340 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+IV P+REL +Q + K+F K + LR + + GG + +Q L+ G +IVV Sbjct 322 DGPIAVIVCPTRELCQQIHSECKRFGKAYN---LRSVAVYGGGSMWEQAKALQEGAEIVV 378 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI-PQVTSDGKRLQV 403 TPGRL D V NL +V +LV DEAD + G+ + + N + P Q Sbjct 379 CTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPD-------RQT 431 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT ++KL+ I+ P V ++G+ + VV + P Sbjct 432 LLFSATFRK-KIEKLARDILVDPIRV-VQGDIGEANEDITQVVEILP------------- 476 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + PE W+ + R ++ ++F K + + L Sbjct 477 ----------------SGPEKWTWLTR--------RLVEFTSTGSVLVFVTKKANAEELA 512 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 Q LHGD ER + + FKK + L+ TDVAARG+DI Sbjct 513 ANLRQD---------DHPLGLLHGDMDQSERNKVISDFKKKSIPVLVATDVAARGLDIPS 563 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 + V+N + + + HRIGR GRA G+A +L+ +++ Sbjct 564 IKTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTSKE 603 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + IP+ L G D++ A+TGSGKT AF P++ Sbjct 250 SSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPIL 309 >sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rrp3 PE=3 SV=1 Length=472 Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 96/354 (27%), Positives = 151/354 (43%), Gaps = 59/354 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P++ L++ P+RELA Q + I +R +++GG+ Q L I+ Sbjct 118 PSSFFGLVLAPTRELAYQISQAFEGLGSTIS---VRSTVLVGGMDMVSQSIALGKKPHII 174 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T +L +++LV+DEAD LL + ++++ +P + + Sbjct 175 VATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKVLP------RERR 228 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V+ L + P + V V+ + L +S Sbjct 229 TYLFSATMSS-KVESLQRASLQNP-----------------LRVAVSSSKFQTVSTLQQS 270 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 +I H K Y V + E IIFCRT + L Sbjct 271 YIFIPHKH----------------------KDLYLVYLLNEFVGQSCIIFCRTVHETQRL 308 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 +F++ G F + LHG R L +F+ L+ TDVAARG+DI Sbjct 309 S-FFLRLLG--------FGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIP 359 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 V V+N LP + + ++HRIGR RA + G+AIS + W + + GK Sbjct 360 SVDVVLNFDLPGDSKTFIHRIGRTARAGKSGVAISFATQYDVEAWLRIEGALGK 413 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+G++ ++ +A + M + PT IQAE+IPL L G D++ AETGSGKT AF++P++Q Sbjct 53 SFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPILQ 112 Query 63 IVYE 66 + + Sbjct 113 ALMD 116 >sp|Q4P3U9|RRP3_USTMA ATP-dependent rRNA helicase RRP3 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=RRP3 PE=3 SV=2 Length=561 Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 91/334 (27%), Positives = 142/334 (43%), Gaps = 64/334 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A ++ P+RELA Q ++ I +R I+GG+ Q L ++V TPG Sbjct 185 ACVLAPTRELAYQISQQVEALGSTIG---VRSATIVGGMDMMSQSIALSKRPHVIVATPG 241 Query 349 RLDD-LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T +L +++LV+DEAD LL + I+++ IP + + ++ S Sbjct 242 RLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQSIP------RERRTMLFS 295 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSHIR 465 AT+ + V KL + P V++ + + T+ H++ +P +H Sbjct 296 ATM-TTKVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYMFMPF-------------AH-- 339 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 K Y V E I+F RT D L Sbjct 340 ---------------------------KDTYLVHLANEQAGHSIIVFTRTVHDSQRLSIL 372 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 G F + LHG R L +FK G L+ TDVA+RG+DI V Sbjct 373 LRLLG---------FPAIPLHGQLSQQARLGALNKFKTGGRSILVATDVASRGLDIPAVD 423 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V+N +P ++Y+HR+GR RA R G +++LV Sbjct 424 LVVNYDIPTNSKDYIHRVGRTARAGRSGRSVTLV 457 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 46/66 (70%), Gaps = 0/66 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++GV+P+I +A M + PT IQ ++IP L DV+ A+TGSGKT AF+IP++Q Sbjct 116 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 175 Query 64 VYETLK 69 +++ K Sbjct 176 LWDNPK 181 >sp|Q750Q4|MS116_EREGS ATP-dependent RNA helicase MSS116, mitochondrial OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MSS116 PE=3 SV=1 Length=658 Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 51/341 (15%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE---LLIIGGVAARDQLSVLENGV-DIV 343 KA+++ P+R+LA Q N I + + N KLR ++++GG + + LE +IV Sbjct 199 KAVVIAPTRDLAAQIFNEINEMRNA--NRKLRRFNAVVMMGGSSRTETFRSLERRRPNIV 256 Query 344 VGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK-RL 401 V TPGRL D++ + G ++V F VLDEAD LL G+ + ++++ + Q+ G + Sbjct 257 VATPGRLIDMLEACGPKYFTEVDFKVLDEADTLLEIGFKQALEQINDILNQLNQKGTTHI 316 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + ++ SATL V+ L+ IM+ + + V+P E + + Sbjct 317 RTLLVSATLDD-KVQSLANSIMNHAKCL--------------FIDTVDPNEQATNENIAQ 361 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR--AIKEHKMDQAIIFCRTKIDC 519 + + D A I Y +R A K+ +AI+F T + Sbjct 362 KVVISKDF------------------ADNITASLYKIREEASANPKL-KAIVFMPTIVAV 402 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + + Q G + HG R ++RF+ D L+CTDVAARG+ Sbjct 403 EYWGELLQSQCRGT-------PVLLFHGGLSQGRRNSTMKRFRAMDSGILVCTDVAARGM 455 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 D+ V +V V +P NY+HRIGR GRA R G + +A Sbjct 456 DVSDVQHVYQVGVPTSPDNYIHRIGRTGRAGRKGSSTIFLA 496 >sp|Q3ZBV2|DD19A_BOVIN ATP-dependent RNA helicase DDX19A OS=Bos taurus OX=9913 GN=DDX19A PE=2 SV=1 Length=478 Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 113/437 (26%), Positives = 192/437 (44%), Gaps = 108/437 (25%) Query 256 VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L++ P I +SQ SG A +++ + P+ L + P+ ELA QT I+ Sbjct 124 MMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIE 182 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK-LNLSQVRF 366 Q K+ +P+L+ + G + E+ IV+GTPG + D S K ++ +++ Sbjct 183 QMGKF--HPELKLAYAVRGNKLERGQKISEH---IVIGTPGTVLDWCSKLKFIDPKKIKV 237 Query 367 LVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 VLDEAD ++ +QG+ D R+ +P + Q+++ SAT V K ++K++ Sbjct 238 FVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPD 290 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P + LK E+ DT+ V N + ++ Sbjct 291 PNIIKLKREEETLDTIKQYYVLCNSRDEKF------------------------------ 320 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 +A+ + G + QA+IFC T+ L K+GHQ + L Sbjct 321 -QALCNIYGAITIA--------QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L 362 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNY 599 G+ +R +ERF++G + L+ T+V ARGID+ V VIN LP +K + Y Sbjct 363 SGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETY 422 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 +HRIGR GR + GLA+++V ++ + M +L Sbjct 423 LHRIGRTGRFGKRGLAVNMVDSK-------------------------------HSMNIL 451 Query 660 SEIEEHLNCTISQVEPD 676 + I+EH N I +++ D Sbjct 452 NRIQEHFNKKIERLDTD 468 Score = 39.7 bits (91), Expect = 0.090, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 39/64 (61%), Gaps = 2/64 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG--GGDVLMAAETGSGKTGAFSIPV 60 +F E+ + P++ Q V M + P+ IQ ++P++L +++ +++G+GKT AF + + Sbjct 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAM 151 Query 61 IQIV 64 + V Sbjct 152 LSRV 155 >sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1 Length=625 Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 96/343 (28%), Positives = 158/343 (46%), Gaps = 59/343 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+A+++ P+REL EQ K + + R ++ GG R Q L VD+V Sbjct 185 PRRPRAVVLCPTRELTEQVFRVAKSISHHA---RFRSTMVSGGSRIRPQEDSLNMPVDMV 241 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY----SDFINRMHNQIPQVTSDGK 399 VGTPGR+ D + G + +++LVLDEAD + QG+ F+ + N+ + G Sbjct 242 VGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAAKPGDQG- 300 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q ++ +AT+ + V+KL ++ F V L +T +R+ Sbjct 301 -FQTVLVTATM-TKAVQKLIDE--EFEGIVHL-------------------RTTTFQKRV 337 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + R D + + S +++L+ A K ++ ++FC T ++ Sbjct 338 ATA--RHDFIKL-------SGSENKLEALLQVLEPSLA-------KGNKVMVFCNT-LNS 380 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK--KGDVRFLICTDVAAR 577 +F+ + +Q S V HG+ ER +NL +F+ +GD L+CTD+AAR Sbjct 381 SRAVDHFLTE--------NQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCTDLAAR 432 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 G+D+ V +VI P +Y+HR GR R G SLVA Sbjct 433 GLDLD-VDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVA 474 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+G+ E+ A+ EM PT+IQ +P +L G V++ + TGSGKT A+ +P++Q Sbjct 111 SFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQ 170 Query 63 IV 64 ++ Sbjct 171 LL 172 >sp|Q4WRV2|DRS1_ASPFU ATP-dependent RNA helicase drs1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=drs1 PE=3 SV=1 Length=830 Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 107/385 (28%), Positives = 169/385 (44%), Gaps = 64/385 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + I+ P+RELA Q N + + D + ++GG + R+Q ++L+ D+++ TP Sbjct 383 RVAILMPTRELAVQCYNVATKLATHTD---ITFCQLVGGFSLREQENILKKRPDVIIATP 439 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + + LVLDEAD +L G++D +N + IP K Q ++ Sbjct 440 GRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELNEILTTIP------KSRQTMLF 493 Query 407 SATLHSFDVKKLSEKIMHFPT--WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT+ V KL ++ P VD K S+ T V RL Sbjct 494 SATMTD-SVDKLIRVGLNRPVRLMVDSKKNTSMNLTQEFV-------------RL----- 534 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 RPG + Y + E + I+F R K + + Sbjct 535 -----------RPGREDKRLG----------YLLYLCNEIYTGRVIVFFRQKREAHRVRI 573 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F G LHG +R +++E F++G V FL+ TD+A+RG+DI GV Sbjct 574 VFGLLG---------LKAAELHGSMSQEQRIKSVENFREGKVAFLLATDLASRGLDIKGV 624 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK-VWYHVCSSRGKGC-YNTR 642 VIN P + Y+HR+GR RA R G A ++ A K V V + + +G +R Sbjct 625 ETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRKIVKSAVKAGKAQGAKIVSR 684 Query 643 LKEDGGCTIWYNEMQ-LLSEIEEHL 666 + + W + + L EIEE L Sbjct 685 VVDPAVADEWAAKAKGLEDEIEEVL 709 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P+++ Sbjct 311 SFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 370 >sp|P10081|IF4A_YEAST ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIF1 PE=1 SV=3 Length=395 Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 97/337 (29%), Positives = 155/337 (46%), Gaps = 59/337 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+AL++ P+RELA Q + ++D ++ IGG + + L + IVVG Sbjct 90 APQALMLAPTRELALQIQKVVMALAFHMD---IKVHACIGGTSFVEDAEGLRDA-QIVVG 145 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + + +++ +LDEAD +LS G+ + I ++ +P T QV++ Sbjct 146 TPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTT------QVVL 199 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ + DV +++ K M P + +K ++ + + V V + Sbjct 200 LSATMPN-DVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEE-------------- 244 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 E E + L +V QA+IFC T+ + L Sbjct 245 -----------------EYKYECLTDLYDSISVT--------QAVIFCNTRRKVEELTTK 279 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + +F+ ++ D ER ++ F+ G R LI TD+ ARGID+ V Sbjct 280 L---------RNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVS 330 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 VIN LP K+NY+HRIGR GR R G+AI+ V E Sbjct 331 LVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNE 367 Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust. Identities = 21/48 (44%), Positives = 31/48 (65%), Gaps = 0/48 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 P+ IQ +I I+ G DVL A++G+GKTG FSI +Q + ++K Q Sbjct 45 PSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQ 92 >sp|A6ZQJ1|IF4A_YEAS7 ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=TIF1 PE=3 SV=1 Length=395 Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 97/337 (29%), Positives = 155/337 (46%), Gaps = 59/337 (18%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+AL++ P+RELA Q + ++D ++ IGG + + L + IVVG Sbjct 90 APQALMLAPTRELALQIQKVVMALAFHMD---IKVHACIGGTSFVEDAEGLRDA-QIVVG 145 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + + +++ +LDEAD +LS G+ + I ++ +P T QV++ Sbjct 146 TPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTT------QVVL 199 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ + DV +++ K M P + +K ++ + + V V + Sbjct 200 LSATMPN-DVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEE-------------- 244 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 E E + L +V QA+IFC T+ + L Sbjct 245 -----------------EYKYECLTDLYDSISVT--------QAVIFCNTRRKVEELTTK 279 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + +F+ ++ D ER ++ F+ G R LI TD+ ARGID+ V Sbjct 280 L---------RNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVS 330 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 VIN LP K+NY+HRIGR GR R G+AI+ V E Sbjct 331 LVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNE 367 Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust. Identities = 21/48 (44%), Positives = 31/48 (65%), Gaps = 0/48 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 P+ IQ +I I+ G DVL A++G+GKTG FSI +Q + ++K Q Sbjct 45 PSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQ 92 >sp|A7EML8|RRP3_SCLS1 ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=rrp3 PE=3 SV=1 Length=482 Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 93/348 (27%), Positives = 150/348 (43%), Gaps = 59/348 (17%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q + + I +++ +I+GG+ Q L I+V TPGR Sbjct 128 LVLAPTRELAYQISQSFEALGSII---RVKCAVIVGGMDMVPQAIALGKKPHIIVATPGR 184 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L D L +T +L +++LV+DEAD LL + ++++ +P + + + SA Sbjct 185 LLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLP------RERRTYLFSA 238 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 T+ S V+ L + P V + TV ++ +++I Sbjct 239 TISS-KVESLQRASLKDPLRVSISSNKY--QTVSTLI---------------QNYIFIPL 280 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 VH K Y + + E AIIF RT + + Sbjct 281 VH----------------------KDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRT 318 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 G F + LHG R L +F+ G L+ TDVAARG+DI V V+ Sbjct 319 LG---------FGAIPLHGQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVL 369 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 N +P + + Y+HR+GR RA + G AIS V ++W + ++ GK Sbjct 370 NYDMPQDSKTYIHRVGRTARAGKSGHAISFVTQYDVEIWMRIEAALGK 417 Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 43/60 (72%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++G++ + +A + + + PT IQ ESIPL L G D++ AETGSGKT AF++P++Q Sbjct 57 SFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQ 116 >sp|Q5ACK7|DRS1_CANAL ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DRS1 PE=3 SV=1 Length=613 Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 96/359 (27%), Positives = 163/359 (45%), Gaps = 58/359 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + K +I+ P+RELA Q K+ +++N L L +GG+ R Q L+ DIV+ Sbjct 198 TSTKVIILTPTRELALQVYEFGKKLSHHVNN--LNIGLAVGGLNLRQQEEQLKTRPDIVI 255 Query 345 GTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 TPGRL D + ++ ++ ++ LV+DEAD +L +G+ D + + + IP+ + Q Sbjct 256 ATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEILSLIPK-----HKRQT 310 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT+++ ++ L + + P + + SV +L + Sbjct 311 LLFSATMNT-RIQDLIQLSLQKPVRIMIDPPKSVAS------------------KLLQQF 351 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +R + +D +P ++LKG + + ++F K L Sbjct 352 VR---IRKRDQLKPAL--------LYQLLKGVSS----------RVVVFVARKETAHRLR 390 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G LHG +R QN++ FK +V LICTD+AARG+DI Sbjct 391 IVLGLLG---------LKVSELHGALTQEQRLQNVKNFKSLEVPVLICTDLAARGLDIPK 441 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA-TEKEKVWYHVCSSRGKGCYNT 641 + VIN +P + Y+HR+GR RA R G +I+ V + +E+ GKG T Sbjct 442 IELVINYDMPKTFEIYLHRVGRTARAGRDGTSITFVGESSQERAIVKSAIVNGKGVAKT 500 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 40/61 (66%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F + + + + + E+ + PT IQ+ SIP+ L G D++ A+TGSGKTGA+ IP+I Sbjct 130 TSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPII 189 Query 62 Q 62 + Sbjct 190 E 190 >sp|Q5R7D1|DDX42_PONAB ATP-dependent RNA helicase DDX42 OS=Pongo abelii OX=9601 GN=DDX42 PE=2 SV=1 Length=942 Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 96/335 (29%), Positives = 147/335 (44%), Gaps = 57/335 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+IV P+REL +Q K+F K + LR + + GG + +Q L+ G +IVV Sbjct 325 DGPIAVIVCPTRELCQQIHAEGKRFGKAYN---LRSVAVYGGGSMWEQAKALQEGAEIVV 381 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D V NL +V +LV DEAD + G+ + + + V D Q + Sbjct 382 CTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASH---VRPD---RQTL 435 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT ++KL+ I+ P V V + N ++ E L Sbjct 436 LFSATFRK-KIEKLARDILIDPIRV-----------VQGDIGEANEDVTQIVEIL----- 478 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + P W+ + R ++ ++F K + + L Sbjct 479 --------------HSGPSKWNWLTR--------RLVEFTSSGSVLLFVTKKANAEELAN 516 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Q+G + LHGD ER + + FKK D+ L+ TDVAARG+DI + Sbjct 517 NLKQEG---------HNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSI 567 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN + + + HRIGR GRA G+A +L+ Sbjct 568 KTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLL 602 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + +P+ L G D++ A+TGSGKT AF P++ Sbjct 253 SSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPML 312 >sp|Q3BNH8|RHLB_XANC5 ATP-dependent RNA helicase RhlB OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) OX=316273 GN=rhlB PE=3 SV=1 Length=573 Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 101/336 (30%), Positives = 155/336 (46%), Gaps = 58/336 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ALI+ P+RELA Q + +F + LR L+ GGV Q +L+ GVD++ Sbjct 82 PEDPRALILAPTRELAIQIHKDAVKFGADLG---LRFALVYGGVDYDKQRELLQQGVDVI 138 Query 344 VGTPGRLDDLVSTGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D V K+ +L VLDEAD + G+ I + ++P+ G R Q Sbjct 139 IATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPE---RGTR-Q 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL S V +L+ + M+ P + ++ E R+ +R+ Sbjct 195 TLLFSATL-SHRVLELAYEHMNEPEKLVVETESIT--------------AARVRQRI--- 236 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + +D+ E + + +L R + +F TK + + Sbjct 237 YFPSDE--------------EKQTLLLGLLSRSEGARTM---------VFVNTKAFVERV 273 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + + H + L GD +R+ L RF+KG + L+ TDVAARG+ I Sbjct 274 ARTL---------ERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHID 324 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 GV YV N LP + ++YVHRIGR R G AIS Sbjct 325 GVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF 360 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ- 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 11 FSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNR 70 Query 63 -IVYETLKDQQ 72 ++ L D++ Sbjct 71 LLIRPALADRK 81 >sp|Q86TM3|DDX53_HUMAN Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens OX=9606 GN=DDX53 PE=1 SV=3 Length=631 Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 92/348 (26%), Positives = 153/348 (44%), Gaps = 70/348 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P L++ P+RELA L+ + KY L+ + I GG Q+ + GVDI++ Sbjct 295 NGPGMLVLTPTRELA---LHVEAECSKY-SYKGLKSICIYGGRNRNGQIEDISKGVDIII 350 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL+DL +NL + +LV+DEAD +L + I ++ Sbjct 351 ATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKIL---------------- 394 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 DV+ + +M TW PDTV + + D + +G ++ Sbjct 395 --------LDVRPDRQTVMTSATW---------PDTVRQLALSY--LKDPMIVYVGNLNL 435 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM------DQAIIFCRTKID 518 + K N I+ E RA+ + + D+ I+F K Sbjct 436 VAVNT-VKQNI---------------IVTTEKEKRALTQEFVENMSPNDKVIMFVSQKHI 479 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D+L F QG S LHG+ + ++++ +E FK G+++ LI TD+ +RG Sbjct 480 ADDLSSDFNIQG---------ISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRG 530 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 +D++ V +V N P YVHR+G +GR + G +++L+ K+ Sbjct 531 LDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKM 578 Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust. Identities = 17/49 (35%), Positives = 36/49 (73%), Gaps = 0/49 (0%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 P++ +++ + + PT IQ+++ P+IL G D+++ A+TG+GKT ++ +P Sbjct 231 PDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMP 279 >sp|Q8PFZ3|RHLB_XANAC ATP-dependent RNA helicase RhlB OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=rhlB PE=3 SV=1 Length=571 Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 101/336 (30%), Positives = 155/336 (46%), Gaps = 58/336 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ALI+ P+RELA Q + +F + LR L+ GGV Q +L+ GVD++ Sbjct 82 PEDPRALILAPTRELAIQIHKDAVKFGADLG---LRFALVYGGVDYDKQRELLQQGVDVI 138 Query 344 VGTPGRLDDLVSTGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D V K+ +L VLDEAD + G+ I + ++P+ G R Q Sbjct 139 IATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPE---RGTR-Q 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL S V +L+ + M+ P + ++ E R+ +R+ Sbjct 195 TLLFSATL-SHRVLELAYEHMNEPEKLVVETESIT--------------AARVRQRI--- 236 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + +D+ E + + +L R + +F TK + + Sbjct 237 YFPSDE--------------EKQTLLLGLLSRSEGARTM---------VFVNTKAFVERV 273 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + + H + L GD +R+ L RF+KG + L+ TDVAARG+ I Sbjct 274 ARTL---------ERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHID 324 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 GV YV N LP + ++YVHRIGR R G AIS Sbjct 325 GVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF 360 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ- 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 11 FSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNR 70 Query 63 -IVYETLKDQQ 72 ++ L D++ Sbjct 71 LLIRPALADRK 81 >sp|A6R603|SUB2_AJECN ATP-dependent RNA helicase SUB2 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=SUB2 PE=3 SV=2 Length=442 Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 98/350 (28%), Positives = 160/350 (46%), Gaps = 59/350 (17%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +P L++ +RELA Q N +F KY+ P ++ + GG + + +L + Sbjct 120 QLEPVPGECSILVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPMQKDIELLSS 177 Query 339 G---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 IVVGTPGRL+ LV KL+L ++ VLDE D +L Q + R +I + T Sbjct 178 KDTYPSIVVGTPGRLNALVRDKKLSLRNIKAFVLDECDKMLDQID---MRRDVQEIFRAT 234 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K QV++ SATL S +V+ + +K M P V + +D T+H ++ + Sbjct 235 PADK--QVMMFSATL-SQEVRPICKKFMRNPLEVYV--DDDTKLTLHGLL--------QY 281 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + +LG+S K + + +Q IIF ++ Sbjct 282 YIKLGESE-----------------------------KNRKLNELLDSLEFNQVIIFVKS 312 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 L++ + F + +H ER + + FK+ + R + TDV Sbjct 313 TQRASELDKLL---------RECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 363 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 RGIDI + IN LP + +Y+HR+GR GR GLAIS V++E+++ Sbjct 364 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSSEQDQ 413 >sp|A1CR32|RRP3_ASPCL ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=rrp3 PE=3 SV=1 Length=473 Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 101/364 (28%), Positives = 156/364 (43%), Gaps = 59/364 (16%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P + L++ P+RELA Q + + I+ +R +I+GG+ Q L I+ Sbjct 119 PQSFFGLVLAPTRELAFQISQSFEALGSTIN---VRCAVIVGGMDMVSQSIALGKKPHII 175 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T +L +++LV+DEAD LL + ++++ +P + + Sbjct 176 VATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLDKILKILP------RERR 229 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V+ L + P V SV + V L +S Sbjct 230 TFLFSATMSS-KVESLQRASLSNPLRV------SVSSNKYQTV-----------STLLQS 271 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + H K Y V + E AIIF RT + + Sbjct 272 YRFIPHKH----------------------KDIYLVYLLNEFVGQSAIIFTRTVHETQRI 309 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 F+ + G F + LHG R L +F+ L+ TDVAARG+DI Sbjct 310 S--FLLRALG-------FGAIPLHGQLSQSSRLGALGKFRSRSRDILVATDVAARGLDIP 360 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V V+N LP + + YVHR+GR RA + G+AIS V ++W + + GK Sbjct 361 SVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWLRIEGALGKKLDEYD 420 Query 643 LKED 646 L++D Sbjct 421 LEKD 424 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 45/64 (70%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++G++ ++ +A M + PT IQAESIPL L D++ AETGSGKT AF++P++Q Sbjct 54 SFKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQDRDLIGLAETGSGKTAAFALPILQ 113 Query 63 IVYE 66 + + Sbjct 114 ALMD 117 >sp|A5DQF1|RRP3_PICGU ATP-dependent rRNA helicase RRP3 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=RRP3 PE=3 SV=2 Length=475 Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 98/349 (28%), Positives = 154/349 (44%), Gaps = 62/349 (18%) Query 289 ALIVEPSRELAEQTLNNIKQ-FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 AL++ P+RELA Q IK+ F +R + I+GG+ DQ L I+V TP Sbjct 135 ALVLAPTRELAYQ----IKETFDALGSGMGVRSVCIVGGMDMMDQARDLMRKPHILVATP 190 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D L +T +L +++LV+DEAD LL + ++++ IP + + Sbjct 191 GRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILKVIPT------KRTTYLF 244 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ + + KL +H P V + + D L +S + Sbjct 245 SATMTN-KIAKLQRASLHEPVKVAVSNKYQTADN------------------LVQSMMLV 285 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D + K + + + E I+F RT C + ++ Sbjct 286 SDGY----------------------KNTFLIHLLNEFMGKSIIVFTRT---CAHTQRST 320 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + + FS V LHG +R +L +FK G LI TDVAARG+DI V Sbjct 321 LLA------RILGFSAVPLHGQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVDV 374 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 VIN +P + + Y+HR+GR RA + G +ISLV +++ + S G Sbjct 375 VINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLEMYLRIESVLG 423 Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 48/63 (76%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+ ++PE+ +A+E++ + PT IQ+ +IP L G D++ A+TGSGKT AF+IP++Q Sbjct 66 FSELNLVPELMEAIEKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFAIPILQS 125 Query 64 VYE 66 ++E Sbjct 126 LWE 128 >sp|Q8P4D4|RHLB_XANCP ATP-dependent RNA helicase RhlB OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=rhlB PE=3 SV=1 Length=573 Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 103/336 (31%), Positives = 152/336 (45%), Gaps = 58/336 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ALI+ P+RELA Q + +F + LR L+ GGV Q +L+ GVD++ Sbjct 82 PEDPRALILAPTRELAIQIHKDAVKFGADLG---LRFALVYGGVDYDKQRELLQQGVDVI 138 Query 344 VGTPGRLDDLVSTGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D V K+ +L VLDEAD + G+ I + ++P+ G R Q Sbjct 139 IATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPE---RGTR-Q 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL S V +L+ + M+ P E V +T E + + Sbjct 195 TLLFSATL-SHRVLELAYEHMNEP-------EKLVVET----------------ETITAA 230 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 +R D E + + +L R + +F TK + + Sbjct 231 RVRQRIYFPSDE--------EKQTLLLGLLSRSEGARTM---------VFVNTKAFVERV 273 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + + H + L GD +R+ L RF+KG + L+ TDVAARG+ I Sbjct 274 ARTL---------ERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHID 324 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 GV YV N LP + ++YVHRIGR R G AIS Sbjct 325 GVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF 360 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ- 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 11 FSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNR 70 Query 63 -IVYETLKDQQ 72 ++ L D++ Sbjct 71 LLIRPALADRK 81 >sp|B0RWT6|RHLB_XANCB ATP-dependent RNA helicase RhlB OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=rhlB PE=3 SV=1 Length=573 Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 103/336 (31%), Positives = 152/336 (45%), Gaps = 58/336 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ALI+ P+RELA Q + +F + LR L+ GGV Q +L+ GVD++ Sbjct 82 PEDPRALILAPTRELAIQIHKDAVKFGADLG---LRFALVYGGVDYDKQRELLQQGVDVI 138 Query 344 VGTPGRLDDLVSTGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D V K+ +L VLDEAD + G+ I + ++P+ G R Q Sbjct 139 IATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPE---RGTR-Q 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL S V +L+ + M+ P E V +T E + + Sbjct 195 TLLFSATL-SHRVLELAYEHMNEP-------EKLVVET----------------ETITAA 230 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 +R D E + + +L R + +F TK + + Sbjct 231 RVRQRIYFPSDE--------EKQTLLLGLLSRSEGARTM---------VFVNTKAFVERV 273 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + + H + L GD +R+ L RF+KG + L+ TDVAARG+ I Sbjct 274 ARTL---------ERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHID 324 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 GV YV N LP + ++YVHRIGR R G AIS Sbjct 325 GVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF 360 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ- 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 11 FSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNR 70 Query 63 -IVYETLKDQQ 72 ++ L D++ Sbjct 71 LLIRPALADRK 81 >sp|Q4UPY5|RHLB_XANC8 ATP-dependent RNA helicase RhlB OS=Xanthomonas campestris pv. campestris (strain 8004) OX=314565 GN=rhlB PE=3 SV=1 Length=573 Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 103/336 (31%), Positives = 152/336 (45%), Gaps = 58/336 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ALI+ P+RELA Q + +F + LR L+ GGV Q +L+ GVD++ Sbjct 82 PEDPRALILAPTRELAIQIHKDAVKFGADLG---LRFALVYGGVDYDKQRELLQQGVDVI 138 Query 344 VGTPGRLDDLVSTGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D V K+ +L VLDEAD + G+ I + ++P+ G R Q Sbjct 139 IATPGRLIDYVKQHKVVSLHACEICVLDEADRMFDLGFIKDIRFLLRRMPE---RGTR-Q 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL S V +L+ + M+ P E V +T E + + Sbjct 195 TLLFSATL-SHRVLELAYEHMNEP-------EKLVVET----------------ETITAA 230 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 +R D E + + +L R + +F TK + + Sbjct 231 RVRQRIYFPSDE--------EKQTLLLGLLSRSEGARTM---------VFVNTKAFVERV 273 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + + H + L GD +R+ L RF+KG + L+ TDVAARG+ I Sbjct 274 ARTL---------ERHGYRVGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHID 324 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 GV YV N LP + ++YVHRIGR R G AIS Sbjct 325 GVKYVYNYDLPFDAEDYVHRIGRTARLGEEGDAISF 360 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ- 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 11 FSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNR 70 Query 63 -IVYETLKDQQ 72 ++ L D++ Sbjct 71 LLIRPALADRK 81 >sp|Q7RY59|RRP3_NEUCR ATP-dependent rRNA helicase rrp-3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rrp-3 PE=3 SV=1 Length=515 Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 102/359 (28%), Positives = 151/359 (42%), Gaps = 59/359 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q + I LR LI+GG+ Q L ++V TPG Sbjct 161 ALVLAPTRELAAQIAQAFEALGSLIS---LRCALILGGMDMVTQAIALGKKPHVIVATPG 217 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L T +L +++LV+DEAD LL + + ++ +P + + + S Sbjct 218 RLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILEKILKFLP------RERRTFLFS 271 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ S V+ L + P V SV + V S ++++ Sbjct 272 ATMSS-KVESLQRASLRDPLKV------SVSSNKYATV----------------STLKSN 308 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 V P M K Y V E IIF RT ++ + Sbjct 309 YVFI----------PHMH-------KDTYLVYLCNEFAGQTIIIFTRTVLETQRIAILLR 351 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 G G + LHG R L +F+ G L+ TDVAARG+DI V V Sbjct 352 TLGMG---------AIPLHGGLSQSARLGALNKFRAGSREILVATDVAARGLDIPNVDCV 402 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 IN LP + + YVHR+GR RA + G AIS+V ++W + ++ G L++D Sbjct 403 INHDLPQDSKTYVHRVGRTARAGKSGHAISIVTQYDLEIWLRIEAALGHKLDEYPLEKD 461 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++G++ + +A E + + PT IQ +SIPL L D++ AETGSGKT AF++P++Q Sbjct 92 FKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFALPILQA 151 Query 64 VYE 66 + + Sbjct 152 LLD 154 >sp|Q921N6|DDX27_MOUSE Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus OX=10090 GN=Ddx27 PE=1 SV=3 Length=760 Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 95/347 (27%), Positives = 155/347 (45%), Gaps = 57/347 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L++ P+REL Q + KQ ++ + L +GG+ + Q + L DI++ TP Sbjct 257 RVLVLVPTRELGIQVHSVTKQLAQFCS---ITTCLAVGGLDVKSQEAALRAAPDILIATP 313 Query 348 GRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GRL D L + +LS + L+LDEAD +L + + +I ++ S + Q ++ Sbjct 314 GRLIDHLHNCPSFHLSSIEVLILDEADRMLDE----YFEEQMKEIIRMCSHHR--QTMLF 367 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ +VK L+ + P + + V + + + P R Sbjct 368 SATMTD-EVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPN-------------RE 413 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D A + +R +H M +F +TK + Sbjct 414 GDREA--------------------IVAALLMRTFTDHVM----LFTQTKKQAHRM---H 446 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I G + G LHG+ +R + L RFK + L+ TDVAARG+DI GV Sbjct 447 ILLGLLGLQVGE------LHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKT 500 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 VIN T+P+ ++YVHR+GR RA R G ++SLV E+ K+ + + Sbjct 501 VINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKA 547 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/64 (38%), Positives = 40/64 (63%), Gaps = 1/64 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + +A+ M + PT IQ IP+ L G D+ A TG+GKT AF++PV++ Sbjct 185 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 244 Query 63 -IVY 65 ++Y Sbjct 245 RLIY 248 >sp|Q0CGJ9|SUB2_ASPTN ATP-dependent RNA helicase sub2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=sub2 PE=3 SV=1 Length=438 Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 102/353 (29%), Positives = 160/353 (45%), Gaps = 60/353 (17%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +P L++ +RELA Q N +F KY+ P ++ + GG + + VL N Sbjct 116 QLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPIQKDIEVLSN 173 Query 339 G---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 +IVVGTPGRL+ LV KL+L V+ VLDE D +L Q + R +I + T Sbjct 174 KESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQID---MRRDVQEIFRAT 230 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K QV++ SATL S +++ + +K M P V + +D T+H + + Sbjct 231 PADK--QVMMFSATL-SQEIRPICKKFMRNPLEVYV--DDDTKLTLHGL--------QQY 277 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + +L +S DN + +Q IIF ++ Sbjct 278 YIKLSESEKNRKLNDLLDNL-----------------------------EFNQVIIFVKS 308 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + L++ + F + +H ER + + FK+ + R + TDV Sbjct 309 TQRANELDKLL---------RECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVF 359 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE-KEKVW 627 RGIDI + IN LP + +Y+HR+GR GR GL+IS V++E EKV Sbjct 360 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEDDEKVL 412 >sp|A1A4H6|DDX27_BOVIN Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus OX=9913 GN=DDX27 PE=2 SV=1 Length=765 Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 93/347 (27%), Positives = 154/347 (44%), Gaps = 57/347 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L++ P+REL Q + KQ ++ + L +GG+ + Q + L DI++ TP Sbjct 260 RVLVLVPTRELGIQVHSVTKQLAQFCS---ITTCLAVGGLDVKSQEAALRAAPDILIATP 316 Query 348 GRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GRL D L + +LS + L+LDEAD +L + + + + +I ++ S + Q ++ Sbjct 317 GRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMK----EIIRMCSHHR--QTMLF 370 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ +VK L+ + P + + V + + + P R Sbjct 371 SATMTD-EVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPN-------------RE 416 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D A + +R +H M +F +TK + Sbjct 417 GDREA--------------------IVAALLMRTFTDHVM----LFTQTKKQAHRMHILL 452 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G LHG+ +R + L RFK + L+ TDVAARG+DI GV Sbjct 453 GLMG---------LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKT 503 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 VIN T+P+ ++YVHR+GR RA R G ++SLV E+ K+ + + Sbjct 504 VINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKEIVKA 550 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/65 (37%), Positives = 41/65 (63%), Gaps = 1/65 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + +A+ M + PT IQ IP+ L G D+ A TG+GKT AF++PV++ Sbjct 188 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 247 Query 63 -IVYE 66 ++Y+ Sbjct 248 RLIYK 252 >sp|P0CQ86|DBP5_CRYNJ ATP-dependent RNA helicase DBP5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP5 PE=3 SV=1 Length=546 Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 96/341 (28%), Positives = 157/341 (46%), Gaps = 73/341 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+ + PSRELA Q I Q ++ ++ L I G +R+ S ++ I++GT Sbjct 219 PQAICIAPSRELARQIQEVIDQIGQFT---QVGTFLAIPGSWSRN--SRIDK--QILIGT 271 Query 347 PGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQ-GYSDFINRMHNQIPQVTSDGKRLQV 403 PG L D++ G L+ +R LVLDEAD L++Q G + R+ +P +Q Sbjct 272 PGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLLP------PNVQN 325 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT + DV++ +++ + L+ ED D + + + Sbjct 326 VLFSATFND-DVQEFADRFAPEANKIFLRKEDITVDAIRQLYLE---------------- 368 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +S + EA+ L Y I Q+I+FC+ K+ D++ Sbjct 369 ---------------CDSEDQKYEALSAL---YDCLVIG-----QSIVFCKRKVTADHIA 405 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + I +G + LHGD+ ER L+ F+ G+ + LI T+V ARGIDI Sbjct 406 ERLISEG---------HAVASLHGDKLSQERDAILDGFRNGETKVLITTNVIARGIDIPA 456 Query 584 VPYVINVTLPD--------EKQNYVHRIGRVGRAERMGLAI 616 V V+N +PD + + Y+HRIGR GR R G ++ Sbjct 457 VNMVVNYDVPDLGPGGNGPDIETYIHRIGRTGRFGRKGCSV 497 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 17/72 (24%), Positives = 42/72 (58%), Gaps = 2/72 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPV 60 +F E+ + ++ + + + P+ IQ +++PL+L +++ +++G+GKT AF++ + Sbjct 149 SFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNM 208 Query 61 IQIVYETLKDQQ 72 + V T+ Q Sbjct 209 LSRVDPTIPTPQ 220 >sp|Q5ASK8|SUB2_EMENI ATP-dependent RNA helicase sub2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=sub2 PE=3 SV=2 Length=434 Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 106/353 (30%), Positives = 163/353 (46%), Gaps = 68/353 (19%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +P L++ +RELA Q N +F KY+ P ++ + GG + + VL N Sbjct 120 QLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPIQKDIEVLSN 177 Query 339 G---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 +I+VGTPGRL+ LV KL+L V+ VLDE D +L Q + R +I + T Sbjct 178 KDTFPNIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQID---MRRDVQEIFRAT 234 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K QV++ SATL S DV+ + +K M P V + +D T+H Sbjct 235 PTDK--QVMMFSATL-SQDVRPICKKFMRNPLEVYV--DDDTKLTLHG------------ 277 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 L + +I+ SEA K K + ++ + +Q IIF ++ Sbjct 278 ---LQQYYIK-------------------LSEAEKNRKLNELLDSL---EFNQVIIFVKS 312 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 I + L++ + F + +H R + FK+ + R + TDV Sbjct 313 TIRANELDKLL---------RECNFPSIAVHSGR--------YKEFKEFNKRICVATDVF 355 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT-EKEKVW 627 RGIDI + IN LP + +Y+HR+GR GR GL+IS V+T E E+V Sbjct 356 GRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTPEDEQVL 408 >sp|P0CQ82|DBP4_CRYNJ ATP-dependent RNA helicase DBP4 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP4 PE=3 SV=1 Length=859 Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 102/346 (29%), Positives = 163/346 (47%), Gaps = 60/346 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+RELA QT ++ KY + L+IGG +++ L ++I++ TPG Sbjct 135 AVVISPTRELAVQTFMQLRDIGKYHN---FSAGLVIGGKPLKEEQERL-GRMNILIATPG 190 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI-PQVTSDGKR--LQVI 404 RL L ST + S V+ LVLDEAD LL G+ + + + P T+ G R Q + Sbjct 191 RLLQHLDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIVSHFSPVQTAPGSRPSRQTL 250 Query 405 VCSATLHSFDVKKLSEKIMHFPTWV--DLKGEDSV-PDTV--HHVVVPVNPKTDRLWERL 459 + SAT S D+ L++ ++ P ++ + GE+ V P + ++ VVP+ K D LW + Sbjct 251 LFSAT-QSKDLAALAKLSLYEPLYISCNKPGEEGVMPANLEQYYAVVPLERKLDALWGFV 309 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 KSH++ + + + G+ A R IF Sbjct 310 -KSHLKMKGI-------------------VFVTSGKQARRV--------RFIF------- 334 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 E + G P + LHG +K R +RF LICTDVAARG+ Sbjct 335 ---ETFRRLHPGLP--------LMHLHGKQKQPTRLDIFQRFSSSKSALLICTDVAARGL 383 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 D V +VI + PD+ Y+HR+GR R + G A++++ +E+ Sbjct 384 DFPAVDWVIQLDCPDDVDTYIHRVGRTARYQSAGTALTILCPSEEE 429 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+ + + + ++ +L PT IQ+ +IP L D+L +A+TGSGKT AF IP+++ Sbjct 62 FSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLER 121 Query 64 VY 65 +Y Sbjct 122 LY 123 >sp|P0CQ83|DBP4_CRYNB ATP-dependent RNA helicase DBP4 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP4 PE=3 SV=1 Length=859 Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 102/346 (29%), Positives = 163/346 (47%), Gaps = 60/346 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+RELA QT ++ KY + L+IGG +++ L ++I++ TPG Sbjct 135 AVVISPTRELAVQTFMQLRDIGKYHN---FSAGLVIGGKPLKEEQERL-GRMNILIATPG 190 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI-PQVTSDGKR--LQVI 404 RL L ST + S V+ LVLDEAD LL G+ + + + P T+ G R Q + Sbjct 191 RLLQHLDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIVSHFSPVQTAPGSRPSRQTL 250 Query 405 VCSATLHSFDVKKLSEKIMHFPTWV--DLKGEDSV-PDTV--HHVVVPVNPKTDRLWERL 459 + SAT S D+ L++ ++ P ++ + GE+ V P + ++ VVP+ K D LW + Sbjct 251 LFSAT-QSKDLAALAKLSLYEPLYISCNKPGEEGVMPANLEQYYAVVPLERKLDALWGFV 309 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 KSH++ + + + G+ A R IF Sbjct 310 -KSHLKMKGI-------------------VFVTSGKQARRV--------RFIF------- 334 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 E + G P + LHG +K R +RF LICTDVAARG+ Sbjct 335 ---ETFRRLHPGLP--------LMHLHGKQKQPTRLDIFQRFSSSKSALLICTDVAARGL 383 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 D V +VI + PD+ Y+HR+GR R + G A++++ +E+ Sbjct 384 DFPAVDWVIQLDCPDDVDTYIHRVGRTARYQSAGTALTILCPSEEE 429 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+ + + + ++ +L PT IQ+ +IP L D+L +A+TGSGKT AF IP+++ Sbjct 62 FSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLER 121 Query 64 VY 65 +Y Sbjct 122 LY 123 >sp|Q9FLB0|RH18_ARATH DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana OX=3702 GN=RH18 PE=2 SV=1 Length=593 Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 97/370 (26%), Positives = 165/370 (45%), Gaps = 46/370 (12%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDI 342 P+ +I+ P+REL+ Q N + F + N + +L++GG + + ++E G ++ Sbjct 88 PHQVMGVIISPTRELSTQIYNVAQPFVSTLAN--VNSVLLVGGREVKADMKIIEEEGCNV 145 Query 343 VVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 ++GTPGRL D++ + L+ + L+LDEAD LL G+ +N + +++P+ G Sbjct 146 LIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLPKQRRTG--- 202 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT + V++L++ + P V+++ K Sbjct 203 ---LFSAT-QTEGVEELAKAGLRNPVRVEVRA---------------------------K 231 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 S + T G + M EA K K V + ++ + I+F T C + Sbjct 232 SKSESSQQLTNSKTPSGLHLEYMECEADK--KSSQLVDLLIKNSDKKLIVFFMT---CAS 286 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 ++ + + P K S + +HGD K + R + L F K L+CTDVAARG+DI Sbjct 287 VDYWGLVLSKIPALKS--ISLIPIHGDMKQNARDKALASFTKASSGALLCTDVAARGLDI 344 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 G+ YV+ P + + HR GR R R G AI + KE+ + R Sbjct 345 PGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLLP-KEEAYVEFMRIRRVPLEER 403 Query 642 RLKEDGGCTI 651 + ED I Sbjct 404 KCSEDASDVI 413 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/53 (42%), Positives = 36/53 (68%), Gaps = 0/53 (0%) Query 12 EIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 +I +A+ + D+ T +QA +IPL+ DV + A TGSGKT AF +P+++I+ Sbjct 26 DIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEIL 78 >sp|Q9NUU7|DD19A_HUMAN ATP-dependent RNA helicase DDX19A OS=Homo sapiens OX=9606 GN=DDX19A PE=1 SV=1 Length=478 Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 113/437 (26%), Positives = 190/437 (43%), Gaps = 108/437 (25%) Query 256 VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L++ P I +SQ SG A +++ + P+ L + P+ ELA QT I+ Sbjct 124 MMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIE 182 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK-LNLSQVRF 366 Q K+ P+L+ + G + E IV+GTPG + D S K ++ +++ Sbjct 183 QMGKFY--PELKLAYAVRGNKLERGQKISEQ---IVIGTPGTVLDWCSKLKFIDPKKIKV 237 Query 367 LVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 VLDEAD ++ +QG+ D R+ +P + Q+++ SAT V K ++K++ Sbjct 238 FVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPD 290 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P + LK E+ DT+ V + + ++ Sbjct 291 PNVIKLKREEETLDTIKQYYVLCSSRDEKF------------------------------ 320 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 +A+ L G + QA+IFC T+ L K+GHQ + L Sbjct 321 -QALCNLYGAITIA--------QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L 362 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNY 599 G+ +R +ERF++G + L+ T+V ARGID+ V VIN LP +K + Y Sbjct 363 SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETY 422 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 +HRIGR GR + GLA+++V ++ + M +L Sbjct 423 LHRIGRTGRFGKRGLAVNMVDSK-------------------------------HSMNIL 451 Query 660 SEIEEHLNCTISQVEPD 676 + I+EH N I +++ D Sbjct 452 NRIQEHFNKKIERLDTD 468 Score = 39.7 bits (91), Expect = 0.087, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 39/64 (61%), Gaps = 2/64 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPV 60 +F E+ + P++ Q V M + P+ IQ ++P++L +++ +++G+GKT AF + + Sbjct 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAM 151 Query 61 IQIV 64 + V Sbjct 152 LSRV 155 >sp|P0CQ87|DBP5_CRYNB ATP-dependent RNA helicase DBP5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP5 PE=3 SV=1 Length=546 Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 95/341 (28%), Positives = 157/341 (46%), Gaps = 73/341 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+ + PSRELA Q + Q ++ ++ L I G +R+ S ++ I++GT Sbjct 219 PQAICIAPSRELARQIQEVVDQIGQFT---QVGTFLAIPGSWSRN--SRIDK--QILIGT 271 Query 347 PGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQ-GYSDFINRMHNQIPQVTSDGKRLQV 403 PG L D++ G L+ +R LVLDEAD L++Q G + R+ +P +Q Sbjct 272 PGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLLP------PNVQN 325 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT + DV++ +++ + L+ ED D + + + Sbjct 326 VLFSATFND-DVQEFADRFAPEANKIFLRKEDITVDAIRQLYLE---------------- 368 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +S + EA+ L Y I Q+I+FC+ K+ D++ Sbjct 369 ---------------CDSEDQKYEALSAL---YDCLVIG-----QSIVFCKRKVTADHIA 405 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + I +G + LHGD+ ER L+ F+ G+ + LI T+V ARGIDI Sbjct 406 ERLISEG---------HAVASLHGDKLSQERDAILDGFRNGETKVLITTNVIARGIDIPA 456 Query 584 VPYVINVTLPD--------EKQNYVHRIGRVGRAERMGLAI 616 V V+N +PD + + Y+HRIGR GR R G ++ Sbjct 457 VNMVVNYDVPDLGPGGNGPDIETYIHRIGRTGRFGRKGCSV 497 Score = 33.5 bits (75), Expect = 8.8, Method: Compositional matrix adjust. Identities = 17/72 (24%), Positives = 42/72 (58%), Gaps = 2/72 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPV 60 +F E+ + ++ + + + P+ IQ +++PL+L +++ +++G+GKT AF++ + Sbjct 149 SFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNM 208 Query 61 IQIVYETLKDQQ 72 + V T+ Q Sbjct 209 LSRVDPTIPTPQ 220 >sp|P20449|DBP5_YEAST ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP5 PE=1 SV=2 Length=482 Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 96/341 (28%), Positives = 157/341 (46%), Gaps = 69/341 (20%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 +P+A+ + PSRELA QTL +++ K+ K+ LI+ +++ + ++VG Sbjct 162 SPQAICLAPSRELARQTLEVVQEMGKFT---KITSQLIVPDSFEKNK----QINAQVIVG 214 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPG + DL+ + L +++ VLDEAD +L QG D R+ +P+ T Q++ Sbjct 215 TPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDT------QLV 268 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT V++ ++KI+ ++L+ + D + + + + D+ Sbjct 269 LFSATFADA-VRQYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKF--------- 318 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +L Y + I +IIF TK + L Sbjct 319 -------------------------DVLTELYGLMTI-----GSSIIFVATKKTANVL-- 346 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G +GH+ S LHGD + ER + ++ F++G + LI T+V ARGIDI V Sbjct 347 -----YGKLKSEGHEVSI--LHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTV 399 Query 585 PYVINVTLPD------EKQNYVHRIGRVGRAERMGLAISLV 619 V+N LP + Y+HRIGR GR R G+AIS V Sbjct 400 SMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFV 440 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 40/61 (66%), Gaps = 2/61 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPV 60 +F E+G+ PE+ + + M + P+ IQ ++PL+L +++ +++G+GKT AFS+ + Sbjct 93 SFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTM 152 Query 61 I 61 + Sbjct 153 L 153 >sp|A6ZNQ1|DBP5_YEAS7 ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP5 PE=3 SV=1 Length=482 Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 96/341 (28%), Positives = 157/341 (46%), Gaps = 69/341 (20%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 +P+A+ + PSRELA QTL +++ K+ K+ LI+ +++ + ++VG Sbjct 162 SPQAICLAPSRELARQTLEVVQEMGKFT---KITSQLIVPDSFEKNK----QINAQVIVG 214 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPG + DL+ + L +++ VLDEAD +L QG D R+ +P+ T Q++ Sbjct 215 TPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDT------QLV 268 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT V++ ++KI+ ++L+ + D + + + + D+ Sbjct 269 LFSATFADA-VRQYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKF--------- 318 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +L Y + I +IIF TK + L Sbjct 319 -------------------------DVLTELYGLMTI-----GSSIIFVATKKTANVL-- 346 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G +GH+ S LHGD + ER + ++ F++G + LI T+V ARGIDI V Sbjct 347 -----YGKLKSEGHEVSI--LHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTV 399 Query 585 PYVINVTLPD------EKQNYVHRIGRVGRAERMGLAISLV 619 V+N LP + Y+HRIGR GR R G+AIS V Sbjct 400 SMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFV 440 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 40/61 (66%), Gaps = 2/61 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPV 60 +F E+G+ PE+ + + M + P+ IQ ++PL+L +++ +++G+GKT AFS+ + Sbjct 93 SFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTM 152 Query 61 I 61 + Sbjct 153 L 153 >sp|Q9HGM5|DBP8_SCHPO ATP-dependent RNA helicase dbp8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp8 PE=3 SV=1 Length=453 Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 102/357 (29%), Positives = 156/357 (44%), Gaps = 59/357 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+ ALI+ P+RELA Q +QF N L+ LI+GG+ Q L +V Sbjct 73 PSGIFALILTPTRELAIQI---DEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRPHVV 129 Query 344 VGTPGRLDDLV-STGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V TPGRL DL+ S G+ L +++FLV+DEAD LLS ++D ++ + +P S+ + Sbjct 130 VATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLP--ASEDR 187 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWE 457 + + + T +K +K P W+ D SVP T+ + V+ + + Sbjct 188 QTLLFTATVTDAIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSYIFVSSQVREAY- 246 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 H+ T I E+ AIIF Sbjct 247 ---LVHLLT----------------------------------IPENAKKSAIIFVNRTR 269 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + + + + LH + ER +L RF+ + L+ TDVA+R Sbjct 270 TAELIYSIL---------RLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASR 320 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 G+DI V VIN LP + +Y+HR+GR RA R G +IS+V TE++ H R Sbjct 321 GLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIV-TERDVDLVHAIEDR 376 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++G+ P + ++ + PTDIQ I IL G + + A+TGSGKT AF++P+I+ Sbjct 8 SFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPIIE 67 >sp|Q2H4D0|SUB2_CHAGB ATP-dependent RNA helicase SUB2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=SUB2 PE=3 SV=1 Length=434 Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 103/342 (30%), Positives = 153/342 (45%), Gaps = 63/342 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD---IVVG 345 L++ +RELA Q N +F KY+ P ++ + GG + VL+N I+VG Sbjct 121 VLVMCHTRELAFQIRNEYNRFSKYM--PDIKTGVFYGGTPIQKDAEVLKNKETHPHIIVG 178 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL+ LV L L VR VLDE D +L Q + R +I + T K QV++ Sbjct 179 TPGRLNALVRDKHLRLGNVRMFVLDECDKMLDQID---MRRDVQEIFRATPQQK--QVMM 233 Query 406 CSATLHSFDVKKLSEKIMHFPT--WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 SATL ++K + K M PT +VD ED+ T+H + P +R R Sbjct 234 FSATLAD-EIKPICRKFMQNPTEHYVD---EDT-KLTLHGLQQYYIPLEEREKNR----- 283 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 K N + E + +Q IIF ++ I L+ Sbjct 284 --------KLN------------------------ELLDELQFNQVIIFVKSTIRATELD 311 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + F + +H ER + + FK+ + R + TDV RGIDI Sbjct 312 KLL---------RECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIER 362 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + IN LP + +Y+HR+GR GR GLAIS V ++++K Sbjct 363 INLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVNSDQDK 404 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + PE+ +A+ + + P+++Q IP + GGD++ A++G GKT F + +Q Sbjct 52 FRDFLLKPELLRAIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQ 111 Query 64 V 64 V Sbjct 112 V 112 >sp|Q5F485|DDX42_CHICK ATP-dependent RNA helicase DDX42 OS=Gallus gallus OX=9031 GN=DDX42 PE=2 SV=1 Length=944 Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 93/335 (28%), Positives = 146/335 (44%), Gaps = 57/335 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+IV P+REL +Q + K+F K + LR + + GG + +Q L+ G +IVV Sbjct 325 DGPIAVIVCPTRELCQQIHSECKRFGKAYN---LRSVAVYGGGSMWEQAKALQEGAEIVV 381 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D V NL +V +LV DEAD + G+ + + + V D Q + Sbjct 382 CTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIAS---HVRPD---RQTL 435 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT ++KL+ I+ P V ++G+ + +V + P W L + Sbjct 436 LFSATFRK-KIEKLARDILIDPIRV-VQGDIGEANEDVTQIVEIFPSGPSKWNWLTR--- 490 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R ++ ++F K + + L Sbjct 491 ----------------------------------RLVEFTSSGSVLLFVTKKANAEELAN 516 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Q+ + LHGD ER + + FKK + L+ TDVAARG+DI + Sbjct 517 NLKQE---------DHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSI 567 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN + + + HRIGR GRA G+A +L+ Sbjct 568 KTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLL 602 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/60 (32%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + +P+ + G D++ A+TGSGKT AF P++ Sbjct 253 SSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPML 312 >sp|Q6FNA2|DBP10_CANGA ATP-dependent RNA helicase DBP10 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP10 PE=3 SV=1 Length=969 Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 92/347 (27%), Positives = 152/347 (44%), Gaps = 35/347 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ PSRELA QT + K+F + LR +L+ GG + DQ ++ D+++ TP Sbjct 187 RAIILSPSRELAMQTHSVFKEFSR---GTHLRSVLLTGGDSLEDQFGMMMTNPDVIIATP 243 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+L V + V DEAD L G+ + +N + +P Q ++ S Sbjct 244 GRFLHLKVEMNLDLKSVEYAVFDEADRLFEMGFQEQLNELLAALPSSR------QTLLFS 297 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR-------LWERLG 460 ATL + V +++ P V L E + D + + + K D + + + Sbjct 298 ATLPTSLVDFAKAGLVN-PVLVRLDAESKISDNLEMLFLST--KNDEREANLLYILQEVI 354 Query 461 KSHIRT-------DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 K + T +D A D+ + K + +A + ++F Sbjct 355 KLPLATPEQIKQLNDNKADDSDESAEEDEDKKRRKRKSFNRKAMPKANELPSEKATVVFV 414 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 T+ + L G + ++G H RK L F+ G L+ TD Sbjct 415 PTRHHVEYLSNLLKDCG---------YLVSYIYGALDQHARKSQLYNFRIGLTSILVVTD 465 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 VAARG+DI + V+N +LP + ++HR+GR RA G A S+V+ Sbjct 466 VAARGVDIPMLANVVNYSLPASSKIFIHRVGRTARAGNRGWAYSIVS 512 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ I + + + PT IQ ++IPLIL D++ A TGSGKT AF +P+I+ Sbjct 116 SFASFGLSKLILVNISKRGFRQPTPIQRKTIPLILQNRDIVGMARTGSGKTAAFVLPMIE 175 >sp|Q6CH90|SUB2_YARLI ATP-dependent RNA helicase SUB2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SUB2 PE=3 SV=2 Length=441 Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/354 (28%), Positives = 156/354 (44%), Gaps = 59/354 (17%) Query 275 AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 + + Q + +P +++ +RELA Q +N +F KY+ P ++ + GG + + Sbjct 114 STLQQLEPVPGECSVVVLCHTRELAYQIMNEYARFSKYL--PDVKTAVFYGGSPIQKDIE 171 Query 335 VLEN---GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 +++N ++V TPGRL LV L L V+ V+DE D +L Q + R +I Sbjct 172 LIQNKETSPHVIVATPGRLHALVRDKHLRLGNVKTFVIDECDKVLDQID---MRRDVQEI 228 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 +VT K QV++ SATL S +++ + +K M P + + E + T+H Sbjct 229 FRVTPRQK--QVMMFSATL-SQEIRPICKKFMSSPLEILVDDEGKL--TLHG-------- 275 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 L + ++ DV K R + + + +Q II Sbjct 276 -------LQQYYV---DVEEKSKNRKLGD-------------------LLDNLEFNQVII 306 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F ++ + L Q G F C +H ER + FK+ R + Sbjct 307 FVKSTSRANGLSQVLNANG---------FPCTAVHSGIPQEERIARYKEFKEFKKRICVS 357 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 TDV RGIDI + IN LP E Y+HR+GR GR GLAIS V+T ++K Sbjct 358 TDVFGRGIDIERINLAINYDLPAEADQYLHRVGRAGRFGTKGLAISFVSTPEDK 411 Score = 39.7 bits (91), Expect = 0.097, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 33/59 (56%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+ +A+ + + P+++Q IP + G DVL A+ G GKT F + +Q Sbjct 59 FRDFLLKPELLRAIVDCGFEHPSEVQQVCIPQSILGTDVLCQAKAGVGKTAVFVLSTLQ 117 >sp|Q4P3W3|DBP10_USTMA ATP-dependent RNA helicase DBP10 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP10 PE=3 SV=1 Length=1154 Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 98/368 (27%), Positives = 154/368 (42%), Gaps = 52/368 (14%) Query 288 KALIVEPSRELAEQTLNNIKQFKK----------YIDNPKLRELLIIGGVAARDQLSVLE 337 K+LI+ PSRELA Q L K+ + +R +I+GG + +Q ++ Sbjct 219 KSLILCPSRELAVQILRVGKEIARGWKADAGEGQDSRGEAIRWAIIVGGESLDEQFGIMS 278 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 N D+V+ TPGR+ L L+L V ++V DEAD L G+++ + M ++P Sbjct 279 NNPDVVIATPGRMLHLTVEMNLDLKSVEYVVFDEADRLFEMGFAEQLEEMLLRLPPTR-- 336 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK------ 451 Q ++ SATL V+ + P V L + + + V P Sbjct 337 ----QTLLFSATLPKKLVEFTKAGLQANPKLVRLDADSKISADLRMAFFSVKPSEKEAAL 392 Query 452 ----TDRLWERLGKSHIRTDDVHAKDNTRPGANSPE-MWSEAIKILKGEYAVRAIKEHKM 506 D + LG+ R D A+ N N + S + E+ + +H Sbjct 393 LVLLRDVIGVPLGEQAARDLDEEAQFNEDASDNQADGQRSRGYGNRRAEFKGKTKDKHLG 452 Query 507 D----------------QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 + Q IIFC TK + L G ++C ++ Sbjct 453 NKRKRGGPGGALELLPHQTIIFCATKHHVEYLLLLLTTTG---------YACSHIYSSLD 503 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 R + RF++G LI TDVAARGID+ + +V+N P + + +VHR+GR RA Sbjct 504 QATRGIQMSRFRRGQNSLLIVTDVAARGIDLPVLEHVVNFDFPPQPRTFVHRVGRTARAG 563 Query 611 RMGLAISL 618 R G A S+ Sbjct 564 RNGWAWSM 571 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 F MG+ P + +++ + PT IQ ++IP I+ DV+ A TGSGKT A+ IP+I Sbjct 146 FQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTLAYLIPLI 205 >sp|Q96GQ7|DDX27_HUMAN Probable ATP-dependent RNA helicase DDX27 OS=Homo sapiens OX=9606 GN=DDX27 PE=1 SV=2 Length=796 Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 91/347 (26%), Positives = 152/347 (44%), Gaps = 57/347 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L++ P+REL Q + +Q ++ + + L +GG+ + Q + L DI++ TP Sbjct 291 RVLVLVPTRELGIQVHSVTRQLAQFCN---ITTCLAVGGLDVKSQEAALRAAPDILIATP 347 Query 348 GRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GRL D L + +LS + L+LDEAD +L ++ +I ++ S + Q ++ Sbjct 348 GRLIDHLHNCPSFHLSSIEVLILDEADRMLD----EYFEEQMKEIIRMCSHHR--QTMLF 401 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ +VK L+ + P + + V + + + P R Sbjct 402 SATMTD-EVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPN-------------RE 447 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D A + R +H M +F +TK + Sbjct 448 GDREA--------------------IVAALLTRTFTDHVM----LFTQTKKQAHRMHILL 483 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G LHG+ +R + L RFK + L+ TDVAARG+DI GV Sbjct 484 GLMG---------LQVGELHGNLSQTQRLEALRRFKDEQIDILVATDVAARGLDIEGVKT 534 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 VIN T+P+ ++YVHR+GR RA R G ++SLV ++ K+ + + Sbjct 535 VINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEDERKMLKEIVKA 581 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/65 (37%), Positives = 41/65 (63%), Gaps = 1/65 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + +A+ M + PT IQ IP+ L G D+ A TG+GKT AF++PV++ Sbjct 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 278 Query 63 -IVYE 66 ++Y+ Sbjct 279 RLIYK 283 >sp|A4RBS3|SUB2_PYRO7 ATP-dependent RNA helicase SUB2 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=SUB2 PE=3 SV=1 Length=436 Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 96/342 (28%), Positives = 152/342 (44%), Gaps = 63/342 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD---IVVG 345 L++ +RELA Q N +F KY+ P ++ + GG + +L+N I+VG Sbjct 123 VLVMCHTRELAFQIRNEYNRFSKYM--PDIKTGVFFGGTPIQKDAELLKNKETHPHIIVG 180 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL+ LV L LS VR VLDE D +L Q + R +I + T K QV++ Sbjct 181 TPGRLNALVRDKFLRLSSVRIFVLDECDKMLDQID---MRRDVQEIFRATPQQK--QVMM 235 Query 406 CSATLHSFDVKKLSEKIMHFPT--WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 SATL S ++K + +K M PT +VD + ++ + V + +R L Sbjct 236 FSATL-SDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKEKNRKLNEL---- 290 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 DD+ + +Q IIF ++ + L+ Sbjct 291 --LDDL-----------------------------------QFNQVIIFVKSTLRATELD 313 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + F + +H ER + + FK+ + R + TDV RGIDI Sbjct 314 KLL---------RECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIER 364 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + IN +P + +Y+HR+GR GR GLA+S V +++K Sbjct 365 INLAINYDMPADADSYLHRVGRAGRFGTKGLAVSFVTNDQDK 406 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + PE+ +A+ + + P+++Q IP + GGD++ A++G GKT F + +Q Sbjct 54 FRDFLLKPELLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQ 113 Query 64 V 64 V Sbjct 114 V 114 >sp|Q6FW42|DRS1_CANGA ATP-dependent RNA helicase DRS1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DRS1 PE=3 SV=1 Length=725 Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 96/389 (25%), Positives = 181/389 (47%), Gaps = 54/389 (14%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + + +++ P+RELA Q + K+ +++ N L L +GG+ R Q +L+ DIV+ Sbjct 277 STRVIVLTPTRELAIQVADVGKKIGQFVSN--LTFGLAVGGLNLRQQEQMLKTRPDIVIA 334 Query 346 TPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR +D + ++ N+ V LV+DEAD +L G+ D +N + + +P + Q + Sbjct 335 TPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDGFQDELNEIMSLLPS------KRQTL 388 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT++S +K+L + P V ++ P PK + +L + + Sbjct 389 LFSATMNS-RIKQLISLSLKRP--------------VRIMIDP--PK--QAATKLTQEFV 429 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R + +D+ +P +++ +R + + + ++F K L Sbjct 430 R---IRKRDHLKPSL----LFN----------LIRKLDPNGQKRIVVFVARKDMAHKLRI 472 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G + LHG +R ++ +FK V LICTD+A+RG+DI + Sbjct 473 ILGLLG---------MAVAELHGSLTQEQRLDSVNKFKSLQVPVLICTDLASRGLDIPKI 523 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 VIN +P + Y+HR+GR RA R G +I+ V + + RG Sbjct 524 EVVINYDMPKSYEIYLHRVGRTARAGREGRSITFVGEASAERSIVKDAIRGVNDSEIPGS 583 Query 645 EDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 + G + +N+++ ++I E+++ T+ + Sbjct 584 KAVGRNVDWNQVEETNKIVENMDQTVQDI 612 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/68 (34%), Positives = 44/68 (65%), Gaps = 1/68 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F+++ + + + + + ++ P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I+ Sbjct 207 TFNDLALSRPVMKGLSNLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIE 266 Query 63 -IVYETLK 69 ++Y+ K Sbjct 267 RLLYKPAK 274 >sp|Q6BGU8|DBP8_DEBHA ATP-dependent RNA helicase DBP8 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP8 PE=3 SV=2 Length=441 Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 101/349 (29%), Positives = 164/349 (47%), Gaps = 69/349 (20%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+ L++ P+RELA Q +QF + ++ +I+GG Q L+ V Sbjct 67 PSGIYGLVLTPTRELALQIA---EQFAALGSSMNIKVSVIVGGEDIVKQALELQRRPHFV 123 Query 344 VGTPGRL-DDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V TPGRL D ++++G+ L +V++L+LDEAD LLS + + R N +P S K Sbjct 124 VATPGRLADHILNSGEDTVCGLRRVKYLILDEADRLLSNSFGGDLERCFNILP---STDK 180 Query 400 RLQVIVCSATLHSFDVKKLSE------KIMHFPTWVDLKGEDSVPDT--VHHVVVPVNPK 451 R Q ++ +AT+ V+ L + K+ F V+ + ++P T V +V VP Sbjct 181 R-QTLLFTATVTDA-VRALKDRPVPKGKLPVFIHEVETVDKVAIPSTLSVKYVFVP---- 234 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 S+++ +H+ N P+ +S+++ +II Sbjct 235 ----------SYVKEAYLHSI------LNLPQ-YSDSL-------------------SII 258 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F + L + + +F LH + ER +L RFK G + LI Sbjct 259 FTNRTATAELLRRTL---------RKLEFRVASLHSEMPQTERTNSLHRFKAGAAKILIA 309 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 TDVA+RG+DI V V+N +P + +++HR+GR RA R G AIS+VA Sbjct 310 TDVASRGLDIPTVELVVNYDIPADADDFIHRVGRTARAGRKGDAISIVA 358 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+GV +++A+ M PT IQ+ IP IL G D + A+TGSGKT AF+ P++ Sbjct 2 SFEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPML 60 >sp|P0CQ92|DRS1_CRYNJ ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DRS1 PE=3 SV=1 Length=808 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 103/347 (30%), Positives = 154/347 (44%), Gaps = 65/347 (19%) Query 286 APKALIVEPSRELAEQ--TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 A + L++ P+RELA Q + K +D +R L++GG++ Q L DI+ Sbjct 295 ACRVLVLCPTRELAVQCEAVGKALAEKGGLD---VRFALLVGGLSLNAQAHTLRTLPDIL 351 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D L +T LS + LV+DEAD +L G++D + + P+ Q Sbjct 352 IATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACPRSR------Q 405 Query 403 VIVCSATLHSFDVKKLSEKIMHFP--TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 ++ SAT+ V +L + + P +VD K + T V Sbjct 406 TMLFSATMTD-SVDELVKLSLDKPIRVFVDPKRNTARGLTQEFV---------------- 448 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 IR+DD + SP + + R I+E + IIF R+K Sbjct 449 --RIRSDD----------SRSPSLLA---------LCKRTIRE----KCIIFFRSKALAH 483 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + F G LHG+ +R Q L FK G V +L+ TD+A+RG+D Sbjct 484 QMRIVFGLFG---------LKAAELHGNLTQEQRLQALNDFKAGTVDYLLATDLASRGLD 534 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 I GV VIN +P + Y HR+GR RA R G ++SLV K+ Sbjct 535 IKGVETVINYDMPGQLAQYTHRVGRTARAGRKGRSVSLVGEADRKML 581 Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 41/61 (67%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ M + + +A+ + + PT IQA +IPL L G D+L +A TGSGKT AF +P++ Sbjct 222 SSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPIL 281 Query 62 Q 62 + Sbjct 282 E 282 >sp|P0CQ93|DRS1_CRYNB ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DRS1 PE=3 SV=1 Length=808 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 103/347 (30%), Positives = 154/347 (44%), Gaps = 65/347 (19%) Query 286 APKALIVEPSRELAEQ--TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 A + L++ P+RELA Q + K +D +R L++GG++ Q L DI+ Sbjct 295 ACRVLVLCPTRELAVQCEAVGKALAEKGGLD---VRFALLVGGLSLNAQAHTLRTLPDIL 351 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D L +T LS + LV+DEAD +L G++D + + P+ Q Sbjct 352 IATPGRLIDHLTNTPSFTLSALDVLVIDEADRMLEAGFTDELEEIIKACPRSR------Q 405 Query 403 VIVCSATLHSFDVKKLSEKIMHFP--TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 ++ SAT+ V +L + + P +VD K + T V Sbjct 406 TMLFSATMTD-SVDELVKLSLDKPIRVFVDPKRNTARGLTQEFV---------------- 448 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 IR+DD + SP + + R I+E + IIF R+K Sbjct 449 --RIRSDD----------SRSPSLLA---------LCKRTIRE----KCIIFFRSKALAH 483 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + F G LHG+ +R Q L FK G V +L+ TD+A+RG+D Sbjct 484 QMRIVFGLFG---------LKAAELHGNLTQEQRLQALNDFKAGTVDYLLATDLASRGLD 534 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 I GV VIN +P + Y HR+GR RA R G ++SLV K+ Sbjct 535 IKGVETVINYDMPGQLAQYTHRVGRTARAGRKGRSVSLVGEADRKML 581 Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 41/61 (67%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ M + + +A+ + + PT IQA +IPL L G D+L +A TGSGKT AF +P++ Sbjct 222 SSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPIL 281 Query 62 Q 62 + Sbjct 282 E 282 >sp|Q759L6|SUB2_EREGS ATP-dependent RNA helicase SUB2 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SUB2 PE=3 SV=1 Length=438 Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 92/346 (27%), Positives = 156/346 (45%), Gaps = 59/346 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN---G 339 +P +++ +RELA Q N +F KY+ P ++ + GG R + +L+N Sbjct 119 VPGEVSVVVLCNARELAYQIRNEYLRFSKYM--PDVKTAVFYGGTDTRKDIELLKNKDTA 176 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV ++LS V+ V+DE D +L + + R I + T K Sbjct 177 PHIVVATPGRLKALVRDNNIDLSHVKNFVIDECDKVLEELD---MRRDVQDIFRATPRDK 233 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SATL S +++ + + + P +++ +D T+H L Sbjct 234 --QVMMFSATL-SQEIRPICRRFLQNP--LEIFVDDEAKLTLHG---------------L 273 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + +IR ++ K + + + + +Q IIF ++ + Sbjct 274 QQYYIRLEERE----------------------KNRKLAQLLDDLEFNQVIIFVKSTLRA 311 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + F + +HG + ER + FK+ + R + TDV RGI Sbjct 312 NELTKLL---------NASNFPAITVHGHMRQEERIARYKAFKEFEKRICVSTDVFGRGI 362 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 DI + IN +P E Y+HR+GR GR GLAISLV+++ ++ Sbjct 363 DIERINLAINYDMPSEADQYLHRVGRAGRFGTKGLAISLVSSKDDE 408 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + +Q Sbjct 56 FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQ 114 >sp|Q1DI07|SUB2_COCIM ATP-dependent RNA helicase SUB2 OS=Coccidioides immitis (strain RS) OX=246410 GN=SUB2 PE=3 SV=1 Length=443 Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 99/351 (28%), Positives = 162/351 (46%), Gaps = 59/351 (17%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + Q + +P L++ +RELA Q N +F KY+ P ++ + GG + + VL Sbjct 119 LNQLEPVPGECSILVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPMQKDIEVL 176 Query 337 ENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 + +IVVGTPGRL+ LV KL+L ++ VLDE D +L Q + R +I + Sbjct 177 SSKDTYPNIVVGTPGRLNALVREKKLSLRNIKAFVLDECDKMLDQID---MRRDVQEIFR 233 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 T K QV++ SATL S +++ + +K M P V + +D T+H Sbjct 234 STPADK--QVMMFSATL-SQEIRPICKKFMRNPLEVYV--DDDTKLTLHG---------- 278 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 L + +I+ SEA K K + + +Q IIF Sbjct 279 -----LQQYYIK-------------------LSEAEKNRKLN---ELLDNLEFNQVIIFV 311 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 ++ + + L++ + F + +H ER + + FK+ + R + TD Sbjct 312 KSTLRANELDKLL---------RECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATD 362 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V RGIDI + IN +P + +Y+HR+GR GR GL+IS V++E + Sbjct 363 VFGRGIDIERINLAINYDMPADADSYLHRVGRAGRFGTKGLSISFVSSEDD 413 Score = 36.6 bits (83), Expect = 0.84, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 62 FRDFLLKPELLRAITDCGFEHPSEVQQVCIPTAILKVDVLCQAKSGLGKTAVFVLTTL 119 >sp|A7F4L5|DRS1_SCLS1 ATP-dependent RNA helicase drs1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=drs1 PE=3 SV=1 Length=801 Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 99/383 (26%), Positives = 166/383 (43%), Gaps = 60/383 (16%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 K +P + A+++ P+RELA Q + + D ++ L +GG++ + Q + L Sbjct 335 KKVPTSRVAILM-PTRELAIQCHAVATKLASHTD---IKFCLAVGGLSLKVQEAELRLRP 390 Query 341 DIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 D+++ TPGR +D + ++ + + LVLDEAD +L G++D +N + IP K Sbjct 391 DVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEAGFADELNEILTTIP------K 444 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q ++ SAT+ S V L ++ P + + + S T+ + + P R +R+ Sbjct 445 SRQTMLFSATMSS-SVDNLIRVGLNRPVRLLVDSQKSTAGTLTQEFIRLRP--GREGKRM 501 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 G Y + D+ I+F R K + Sbjct 502 G-----------------------------------YLLYLCANVYTDRVIVFFRQKKEA 526 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 F G LHG +R +++E F+ G FL+ TD+A+RG+ Sbjct 527 HRARIIFGLSG---------LKATELHGSMSQEQRIKSVEAFRDGKASFLLATDLASRGL 577 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW-YHVCSSRGKGC 638 DI GV VIN P Y+HR+GR RA R G A ++ A KV V +SR +G Sbjct 578 DIKGVDTVINYEAPQSHDIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASRTQGA 637 Query 639 -YNTRLKEDGGCTIWYNEMQLLS 660 +R+ E W ++ ++ Sbjct 638 KVVSRVIEASEADSWSEKVDEMA 660 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F M + I + + + + PT IQ+++IP+ L G DV+ A TGSGKT AF +PV+ Sbjct 268 STFQSMSLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFIVPVL 327 Query 62 Q 62 + Sbjct 328 E 328 >sp|Q0U8V9|DBP8_PHANO ATP-dependent RNA helicase DBP8 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP8 PE=3 SV=1 Length=508 Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 94/336 (28%), Positives = 154/336 (46%), Gaps = 55/336 (16%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 LI+ P+RELA Q +K I P+ ++ +L+ GG R+Q L + +V+ TPG Sbjct 149 LIITPTRELAIQIYEQVK----AISAPQSMKPILVTGGSDQREQAIALASRPHVVIATPG 204 Query 349 RLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 RL + + T + L +VRF+V DEAD LL+ G I + + + +R Q + Sbjct 205 RLAEHIKTSGEDTICGLRRVRFVVFDEADRLLAPGRGSMIPDIETCLSVLPPKEQR-QTL 263 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT+ P + LK + P + V V+ +T L + ++ Sbjct 264 LFTATVT--------------PEVLALKSQPRAPGRLPIFVCEVDTETLATPASLSQLYL 309 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC-RTKIDCDNLE 523 +T H + +P ++++ IIFC RTK L Sbjct 310 QTPVTHKECYLHVLLLTPLNLTKSV--------------------IIFCNRTK--TATLL 347 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 +Y ++ H+ + LH K +R NL RF+ R L+ TDVAARG+DI Sbjct 348 EYMLRM------LDHRVTA--LHSGLKQQDRISNLARFRAQAARILVATDVAARGLDIPE 399 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V V+N +P + +Y+HR+GR RA R G +++ + Sbjct 400 VGLVVNFDVPRDPDDYIHRVGRTARAGRPGNSVTFI 435 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ + V P + ++ M+ PT IQ IP IL G D + + TG+GKT AFS+P++Q Sbjct 78 SFASIDVAPWLVASLASMEIKRPTGIQKACIPEILKGRDCIGGSRTGTGKTVAFSVPILQ 137 >sp|Q0CNX1|DBP8_ASPTN ATP-dependent RNA helicase dbp8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp8 PE=3 SV=1 Length=527 Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 100/341 (29%), Positives = 151/341 (44%), Gaps = 51/341 (15%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+RELA L +QFK ++ +LI GG R Q L +V+ TPG Sbjct 157 AVVLTPTRELA---LQIYEQFKAISAPQSMKPVLITGGTDMRPQALALSQRPHVVIATPG 213 Query 349 RLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 RL D + T + L +VR +VLDEAD LL+ G + + + + +R Q + Sbjct 214 RLADHIQTSGEDTVRGLKRVRMVVLDEADRLLAPGPGSMLPDVETCLSALPPSSER-QTL 272 Query 405 VCSATLHSFDVKKL------SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + +AT+ + +V+ L S K F T ++ G S + P + + + Sbjct 273 LFTATV-TPEVRALKSMPRASTKPPVFVTEIEAGGTTSAGADGAAPKSTLPPTLKQTYLK 331 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 + +H R +H +T A P AIIFC Sbjct 332 VPMTH-REAFLHVLLSTDGNAGKP--------------------------AIIFCNHTKT 364 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D LE+ + H+ + LH ER NL RF+ R L+ TDVA+RG Sbjct 365 ADLLERLLRRLA-------HRVTS--LHSLLPQSERSSNLARFRASAARILVATDVASRG 415 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +DI V V+N +P +YVHR+GR RA R G A++LV Sbjct 416 LDIPSVALVVNYDVPRNPDDYVHRVGRTARAGRRGEAVTLV 456 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F + V P + ++ M PT IQ IP IL G D + + TGSGKT AF++P++ Sbjct 86 SSFKALNVAPWLIGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFAVPIL 145 Query 62 Q 62 Q Sbjct 146 Q 146 >sp|Q0JM17|RH56_ORYSJ DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP1 PE=1 SV=2 Length=432 Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 157/334 (47%), Gaps = 57/334 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DIVVGTP 347 AL++ +RELA Q + ++F KY+ P+++ + GGV + +L+N IVVGTP Sbjct 122 ALVLCHTRELAYQICHEFERFSKYL--PEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTP 179 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L L+L VR +LDE D +L S + R +I ++T K QV++ S Sbjct 180 GRILALAREKDLSLKNVRHFILDECDKMLD---SLDMRRDVQEIFKMTPHDK--QVMMFS 234 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL S +++ + +K M P +++ +D T+H +V + +I+ Sbjct 235 ATL-SKEIRPVCKKFMQDP--MEIYVDDEAKLTLHGLV---------------QHYIK-- 274 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 SEA K K + A+ +Q +IF ++ L + Sbjct 275 -----------------LSEAEKNRKLNDLLDALD---FNQVVIFVKSVSRAAELNKLLC 314 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F + +H ER + FK+G R L+ TD+ RGIDI V V Sbjct 315 ECN---------FPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIV 365 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 IN +PD +Y+HR+GR GR GLAI+ V++ Sbjct 366 INYDMPDSADSYLHRVGRAGRFGTKGLAITFVSS 399 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+++ + P+++Q E IP + G DV+ A++G GKT F + + Sbjct 51 SGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSL 110 Query 62 Q 62 Q Sbjct 111 Q 111 >sp|A6RUH2|DRS1_BOTFB ATP-dependent RNA helicase drs1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=drs1 PE=3 SV=1 Length=801 Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 99/383 (26%), Positives = 166/383 (43%), Gaps = 60/383 (16%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 K +P + A+++ P+RELA Q + + D ++ L +GG++ + Q + L Sbjct 335 KKVPTSRVAILM-PTRELAIQCHAVATKLASHTD---IKFCLAVGGLSLKVQEAELRLRP 390 Query 341 DIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 D+++ TPGR +D + ++ + + LVLDEAD +L G++D +N + IP K Sbjct 391 DVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEAGFADELNEILTTIP------K 444 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q ++ SAT+ S V L ++ P + + + S T+ + + P R +R+ Sbjct 445 SRQTMLFSATMSS-SVDNLIRVGLNRPVRLLVDSQKSTAGTLVQEFIRLRP--GREGKRM 501 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 G Y + D+ I+F R K + Sbjct 502 G-----------------------------------YLLYLCANVYTDRVIVFFRQKKEA 526 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 F G LHG +R +++E F+ G FL+ TD+A+RG+ Sbjct 527 HRARIIFGLSG---------LKATELHGSMSQEQRIKSVEAFRDGKASFLLATDLASRGL 577 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW-YHVCSSRGKGC 638 DI GV VIN P Y+HR+GR RA R G A ++ A KV V +SR +G Sbjct 578 DIKGVDTVINYEAPQSHDIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVKASRTQGA 637 Query 639 -YNTRLKEDGGCTIWYNEMQLLS 660 +R+ E W ++ ++ Sbjct 638 KVVSRVIEASEADSWSEKVDEMA 660 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + I + + + + PT IQ+++IP+ L G DV+ A TGSGKT AF +PV++ Sbjct 270 FQSMSLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFVVPVLE 328 >sp|Q5ACU6|RRP3_CANAL ATP-dependent rRNA helicase RRP3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=RRP3 PE=3 SV=3 Length=534 Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 98/350 (28%), Positives = 153/350 (44%), Gaps = 62/350 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q + F + LR I+GG+ DQ L ++V TPG Sbjct 189 ALVLAPTRELAFQIKDT---FDALGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPG 245 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R +D L T +L +++LV+DEAD LL + ++++ IP KR + S Sbjct 246 RIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPI-----KR-TTYLFS 299 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + ++KL +H P V + + D + ++ VN Sbjct 300 ATMTN-KIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLVN------------------ 340 Query 468 DVHAKDNTRPGANSPEMWSEAIKI-LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + + I I L E+ ++I I+F RT Sbjct 341 ---------------DGYKNTILIHLLNEFMGKSI--------IVFTRTVAHA------- 370 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 Q + F+ V LHG +R +L +FK L+ TDVAARG+DI V Sbjct 371 --QRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARGLDIPSVDV 428 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 VIN +P + + Y+HR+GR RA R G +ISL+ +++ + S GK Sbjct 429 VINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQYDLEMYLRIESVLGK 478 Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 27/59 (46%), Positives = 44/59 (75%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E+ ++P++ +++E M + PT IQ+E+IP L G D++ A+TGSGKT AF+IP++Q Sbjct 120 FKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQ 178 >sp|Q5JK84|RH15_ORYSJ DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP2 PE=1 SV=1 Length=432 Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 157/334 (47%), Gaps = 57/334 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DIVVGTP 347 AL++ +RELA Q + ++F KY+ P+++ + GGV + +L+N IVVGTP Sbjct 122 ALVLCHTRELAYQICHEFERFSKYL--PEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTP 179 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L L+L VR +LDE D +L S + R +I ++T K QV++ S Sbjct 180 GRILALAREKDLSLKNVRHFILDECDKMLD---SLDMRRDVQEIFKMTPHDK--QVMMFS 234 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL S +++ + +K M P +++ +D T+H +V + +I+ Sbjct 235 ATL-SKEIRPVCKKFMQDP--MEIYVDDEAKLTLHGLV---------------QHYIK-- 274 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 SEA K K + A+ +Q +IF ++ L + Sbjct 275 -----------------LSEAEKNRKLNDLLDALD---FNQVVIFVKSVSRAAELNKLLC 314 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + F + +H ER + FK+G R L+ TD+ RGIDI V V Sbjct 315 ECN---------FPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIV 365 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 IN +PD +Y+HR+GR GR GLAI+ V++ Sbjct 366 INYDMPDSADSYLHRVGRAGRFGTKGLAITFVSS 399 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+++ + P+++Q E IP + G DV+ A++G GKT F + + Sbjct 51 SGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSL 110 Query 62 Q 62 Q Sbjct 111 Q 111 >sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1 Length=859 Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/165 (36%), Positives = 93/165 (56%), Gaps = 23/165 (14%) Query 97 DRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCH-------------DQG 143 DR S + + +G W G RA+ G+ +G+ +E+ + D Sbjct 228 DRSSGYPLTIEGFAYL------WSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH 281 Query 144 LCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH- 202 + R+GWS S LG + F +G+GGTGKKS N +F+NYG++F +D IGC+ D + G+ Sbjct 282 VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND 341 Query 203 --VKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGE 244 + F+KNGK +G+AF I + QAL+P ++KN ++FNFG+ Sbjct 342 VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQ 386 >sp|Q9CWX9|DDX47_MOUSE Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus OX=10090 GN=Ddx47 PE=2 SV=2 Length=455 Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 101/387 (26%), Positives = 169/387 (44%), Gaps = 64/387 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P AL++ P+RELA Q +QF+ + ++ +I+GG+ + Q L IV Sbjct 90 PQRLFALVLTPTRELAFQI---SEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIV 146 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D L +T NL +++LV+DEAD +L+ + ++++ IP+ D K Sbjct 147 IATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR---DRK--- 200 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ V+KL + P + + + + + + K Sbjct 201 TFLFSATMTK-KVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSK----------- 248 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 K Y V + E + +IFC T C+N Sbjct 249 -----------------------------FKDTYLVYILNELAGNSFMIFCST---CNNT 276 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 ++ + + F+ + LHG +R +L +FK L+ TDVA+RG+DI Sbjct 277 QRTALLL------RNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIP 330 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG--CYN 640 V V+N +P ++Y+HR+GR RA R G AI+ V +++ + GK + Sbjct 331 HVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFP 390 Query 641 TRLKEDGGCTIWYNEMQLLS--EIEEH 665 T+ +E T NE Q + E+ EH Sbjct 391 TQDEEVMMLTERVNEAQRFARMELREH 417 Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 30/64 (47%), Positives = 45/64 (70%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++GV + +A +++ W PT IQ E+IPL L G D++ AETGSGKTGAF++P++ Sbjct 26 FKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85 Query 64 VYET 67 + ET Sbjct 86 LLET 89 >sp|A5E0U9|DBP8_LODEL ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP8 PE=3 SV=1 Length=444 Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 94/340 (28%), Positives = 153/340 (45%), Gaps = 64/340 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 LI+ P+RELA L +QF ++ +++GG Q L+ V+ TPGR Sbjct 75 LILTPTRELA---LQIAEQFAALGALMNIKVCVVVGGEDFVKQTLELQKKPHFVIATPGR 131 Query 350 LDD-LVSTGKLNLS---QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 L D ++++G+ +S ++++LVLDEAD LLS + + R +P ++ Q ++ Sbjct 132 LADHILNSGEETVSGLRRIKYLVLDEADRLLSNSFGSDLQRCFTILPP----SEKRQTLL 187 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN----PKTDRLWERLGK 461 +AT+ VK L +K + E +P +H V V+ PKT Sbjct 188 FTATVTD-AVKALKDKP---------RAEGKLPVFLHQVDAGVDQIAIPKT--------- 228 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ--AIIFCRTKIDC 519 M+ +K Y +K K ++ A++F + Sbjct 229 -------------------LSTMYVFVPSYVKEAYLTSILKLPKYEESTAVVFVNRTMTA 269 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + + +F LH + ER +L RFK G R LI TDVA+RG+ Sbjct 270 EVLRRML---------RKLEFKVASLHSEMPQTERTNSLHRFKAGAARILIATDVASRGL 320 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 DI V V+N +P + +++HR+GR RA R G AIS++ Sbjct 321 DIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDAISII 360 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFS 57 +F E+GV +++++E M PT IQ+ IP IL G D + A+TGSGKT AF+ Sbjct 4 SFKELGVAKWLSESLEAMKIHSPTSIQSACIPEILKGRDCIGGAKTGSGKTIAFA 58 >sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens OX=9606 GN=DDX47 PE=1 SV=1 Length=455 Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 89/337 (26%), Positives = 149/337 (44%), Gaps = 60/337 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P AL++ P+RELA Q +QF+ + ++ +I+GG+ + Q L I+ Sbjct 90 PQRLFALVLTPTRELAFQI---SEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHII 146 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D L +T NL +++LV+DEAD +L+ + ++++ IP+ D K Sbjct 147 IATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR---DRK--- 200 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ V+KL + P + + + + + + K Sbjct 201 TFLFSATMTK-KVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSK----------- 248 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 K Y V + E + +IFC T C+N Sbjct 249 -----------------------------FKDTYLVYILNELAGNSFMIFCST---CNNT 276 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 ++ + + F+ + LHG +R +L +FK L+ TDVA+RG+DI Sbjct 277 QRTALLL------RNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIP 330 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V V+N +P ++Y+HR+GR RA R G AI+ V Sbjct 331 HVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFV 367 Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 30/64 (47%), Positives = 45/64 (70%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++GV + +A +++ W PT IQ E+IPL L G D++ AETGSGKTGAF++P++ Sbjct 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85 Query 64 VYET 67 + ET Sbjct 86 LLET 89 >sp|A3GH91|DBP5_PICST ATP-dependent RNA helicase DBP5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP5 PE=3 SV=2 Length=500 Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 105/377 (28%), Positives = 170/377 (45%), Gaps = 78/377 (21%) Query 258 LSKAPDGYIVKSQHSGNAQVTQ------TKFLPNAP--KALIVEPSRELAEQTLNNIKQF 309 +S P I +SQ SG + ++ P P + L + P+RELA QTL I Sbjct 145 ISNPPRNMIGQSQ-SGTGKTAAFSLTMLSRVDPKVPSTQCLCLAPTRELARQTLEVISTM 203 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 K+ + + LI+ R I+VGTPG + DL+ ++N++ V+ VL Sbjct 204 GKFTN---ITTQLIVPDALPRGS----STNAHIIVGTPGIVMDLIRRKQINVNGVKVFVL 256 Query 370 DEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 DEAD +L +QG D R+ +P+ T Q+++ SAT + V++ +EK + Sbjct 257 DEADNMLDAQGLGDQCVRVKRTLPKTT------QLVLFSATFPT-KVRQYAEKFVPNANS 309 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 ++LK E+ D + + + + + + E+ E Sbjct 310 LELKQEELNVDGIKQLYMDCDSEKHKF---------------------------EVLCEL 342 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 +L + +IIF K D NL ++ +GH +C LHG Sbjct 343 YGLLT------------IGSSIIFVERK-DTANLLYAKMKA------EGH--ACSILHGG 381 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNYVHR 602 + ER + ++ F++G + LI T+V ARGIDI V V+N LP +K Y+HR Sbjct 382 LETSERDRLIDDFREGRSKVLITTNVLARGIDIASVSMVVNYDLPTDKDGNADPSTYLHR 441 Query 603 IGRVGRAERMGLAISLV 619 IGR GR R+G++IS + Sbjct 442 IGRTGRFGRVGVSISFI 458 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/64 (30%), Positives = 42/64 (66%), Gaps = 2/64 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPV 60 +F E+G+ PE+ + + M + P+ IQ +++PL++ +++ +++G+GKT AFS+ + Sbjct 111 SFEELGLTPELLKGLYAMKFNKPSKIQEKALPLLISNPPRNMIGQSQSGTGKTAAFSLTM 170 Query 61 IQIV 64 + V Sbjct 171 LSRV 174 >sp|Q9BUJ2|HNRL1_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Homo sapiens OX=9606 GN=HNRNPUL1 PE=1 SV=2 Length=856 Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 59/165 (36%), Positives = 93/165 (56%), Gaps = 23/165 (14%) Query 97 DRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCH-------------DQG 143 DR S + + +G W G RA+ G+ +G+ +E+ + D Sbjct 227 DRSSGYPLTIEGFAYL------WSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH 280 Query 144 LCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH- 202 + R+GWS S LG + F +G+GGTGKKS N +F+NYG++F +D IGC+ D + G+ Sbjct 281 VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND 340 Query 203 --VKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGE 244 + F+KNGK +G+AF I + QAL+P ++KN ++FNFG+ Sbjct 341 VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQ 385 >sp|Q6P9R1|DDX51_MOUSE ATP-dependent RNA helicase DDX51 OS=Mus musculus OX=10090 GN=Ddx51 PE=1 SV=1 Length=639 Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 111/426 (26%), Positives = 187/426 (44%), Gaps = 84/426 (20%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA-ARDQLSVLENGVD----- 341 +AL+V P++ELA+Q K F Y D LR L+ G + A++Q S+++ D Sbjct 255 RALVVLPTKELAQQV---SKVFNIYTDTTPLRVALVTGQKSLAKEQESLVQKTADGFRCL 311 Query 342 --IVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR------------ 386 IVV TPGRL D + T +L Q+RFL++DEAD ++ + ++ R Sbjct 312 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAFYSEGPT 371 Query 387 -----MHNQIPQVTSDGKR------LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK-GE 434 + PQ + LQ ++ SATL + D +KL ++ P + G+ Sbjct 372 GSCALLQRTQPQALTAASTCVPQMPLQKLLFSATL-TQDPEKLQRLGLYQPRLFSTRLGQ 430 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 S DT V+ + + +G +H V + +++P Sbjct 431 QSPKDTAE-----VDENSGKYTFPVGLTH---HYVPCRLSSKP----------------- 465 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + + +A+ F ++ + L Y + Q G S P +R Sbjct 466 LIVLHLVLRMSCSRALCFTNSRENSHRL--YLLAQAFG------GVSVAEFSSRYGPGQR 517 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 K+ L++F++G ++ LI TD ARGID+ GV VIN P + YVHR+GR RA + G Sbjct 518 KKILKQFEQGKIQLLISTDATARGIDVQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQ 577 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM--QLLSEIEEHLNCTISQ 672 A +L+ +E+ + + S E G + ++E+ +LL + +SQ Sbjct 578 AFTLLLKVQERKFLQMVS------------EAGVPELTHHEIPRKLLQPLVARYETALSQ 625 Query 673 VEPDIK 678 +E +K Sbjct 626 LEKTVK 631 >sp|Q8SQM5|IF4A_ENCCU ATP-dependent RNA helicase eIF4A OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=TIF1 PE=1 SV=1 Length=425 Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 90/363 (25%), Positives = 166/363 (46%), Gaps = 52/363 (14%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + + L++ +RE+A Q N +F+ R L+ GG LE IVV Sbjct 105 DVTQILVLASTREIAAQ---NAARFEDLGCFMGARVALLSGGSPIAADKVALEKKPHIVV 161 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR++ +++ +L++ ++ V+DEAD +L G+ + + + +I ++ +Q+ Sbjct 162 GTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFRRI----TNKDEVQIA 217 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +++ +SE+I+ P +DL+ D + + Sbjct 218 MFSATYDEEELR-VSEEILINPVIIDLRYNDQTLKGIRQYFI------------------ 258 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 D+ + R G E + K ++ ++ Q+I+F +K D + Sbjct 259 ---DLRKEPPFRKG-------REDYLLPKLVTLYDIFRKQRLGQSIVFINSKEDARIVYD 308 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + I+ H++ C + + ER++ L RF+ G R LI + + +RGIDI + Sbjct 309 WLIR---------HEWECELISAELTQAERERTLNRFRGGTGRCLISSGLLSRGIDIQNL 359 Query 585 PYVINVTLP--DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V + +P + K Y+HRIGR GR R G+AI++V + K + + YNT Sbjct 360 SVVFCLDVPSFERKSTYIHRIGRSGRYGRKGIAINIVYEHELKNLKAI-----ERFYNTT 414 Query 643 LKE 645 +KE Sbjct 415 IKE 417 Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust. Identities = 18/61 (30%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + + G+ ++ + + + + P+ IQ +I I+ G D+ A++G+GKTGAF++ +Q Sbjct 39 TWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQ 98 Query 63 I 63 I Sbjct 99 I 99 >sp|Q18212|DX39B_CAEEL Spliceosome RNA helicase DDX39B homolog OS=Caenorhabditis elegans OX=6239 GN=hel-1 PE=1 SV=1 Length=425 Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 92/331 (28%), Positives = 153/331 (46%), Gaps = 57/331 (17%) Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DIVVGTPGRLDDL 353 +RELA Q ++F KY+ P ++ + GG+A + L N IVVGTPGR+ L Sbjct 118 TRELAFQISKEYERFSKYL--PGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLAL 175 Query 354 VSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 +GKL L +V++ VLDE D ++ G +D + R +I ++T K QV++ SATL Sbjct 176 ARSGKLKLDKVKYFVLDECDKMI--GDAD-MRRDVQEIVKMTPQQK--QVMMFSATLPK- 229 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 +++ + ++ M P V + +D T+H L + +++ + A+ Sbjct 230 ELRTVCKRFMQDPMEVYV--DDEAKLTLHG---------------LQQHYVKLKE--AEK 270 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 N R + + + +Q +IF + C+ L Q +Q Sbjct 271 NRR--------------------LLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQN--- 307 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP 593 F + +H ER + FK R L+ TD+ RG+DI V V N +P Sbjct 308 ------FPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMP 361 Query 594 DEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ++ +Y+HR+ R GR GLAI+ V+ E + Sbjct 362 EDSDSYLHRVARAGRFGTKGLAITFVSDEND 392 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PEI +A+ + + P+++Q E IP + G DV+ A++G GKT F I + Sbjct 41 SGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTL 100 Query 62 Q 62 Q Sbjct 101 Q 101 >sp|A7TJM9|DRS1_VANPO ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DRS1 PE=3 SV=1 Length=752 Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 90/335 (27%), Positives = 154/335 (46%), Gaps = 54/335 (16%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + + +++ P+RELA Q + K+ KY+ L L +GG+ R Q L+ DIV+ Sbjct 302 STRVIVLTPTRELAIQIADVGKKIGKYVSG--LTFGLAVGGLNLRQQEQELKTRPDIVIA 359 Query 346 TPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR +D + ++ N+ V LV+DEAD +L +G+ + +N + +P + Q + Sbjct 360 TPGRFIDHVRNSSSFNVDSVEVLVMDEADRMLEEGFQEELNEILTLLPS------KRQTL 413 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT++S +K L + P V + +NP + RL + + Sbjct 414 LFSATMNS-RIKSLISLSLRKP-----------------VRIMINP-PKQAAARLTQEFV 454 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R + +D+ +P ++ Y +R + + ++F K L Sbjct 455 R---IRKRDHLKPAL----LF----------YLIRKLDGTGQKRIVVFVARKEMAHKLRI 497 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G LHG +R Q++ FK +V LICTD+A+RG+DI + Sbjct 498 ILGLLG---------MKVGELHGSLTQEQRLQSVNNFKSLEVPVLICTDLASRGLDIPKI 548 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN +P + Y+HR+GR RA R G +++ V Sbjct 549 EVVINFDMPKSYEIYLHRVGRTARAGREGRSVTFV 583 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 44/69 (64%), Gaps = 1/69 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+ + + + + + ++ + P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I Sbjct 231 STFNSLTLSRPVLKGLSDLGYTKPSPIQSATIPIGLSGKDIIAGAVTGSGKTAAFMIPII 290 Query 62 Q-IVYETLK 69 + ++Y+ K Sbjct 291 ERLLYKPAK 299 >sp|Q8L4E9|RH36_ORYSJ DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0633500 PE=3 SV=1 Length=501 Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 99/369 (27%), Positives = 164/369 (44%), Gaps = 64/369 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P AL + P+RELA Q +QF+ LR L IGG + Q L +V Sbjct 143 PYGVAALALAPTRELAAQL---AEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPHVV 199 Query 344 VGTPGRLDDLVSTGKLNLSQV----RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V TPGR+ L++ +L++V +FLVLDEAD +L + + + + +P K Sbjct 200 VATPGRIATLINDDP-DLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLP------K 252 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 + Q + SAT+ S +++ L E + + + DT+ + + V P L+ Sbjct 253 KRQTFLFSATI-SDNLRSLLELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELY--- 308 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 ++ Y + + E + I+F T C Sbjct 309 ------------------------LF----------YLLSKMNEDNIRSVIVFVSTCRTC 334 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 L+ + +++ G P V LH + R L FK V L+ TDVA+RG+ Sbjct 335 QYLD-FLLEELGHP--------AVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGL 385 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE-KVWYHVCSSRGK-- 636 DI V VIN +P ++Y+HR+GR RA R GL+IS + T+++ ++ + + GK Sbjct 386 DIQTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQRDIRLLHEIEDVVGKQL 445 Query 637 GCYNTRLKE 645 G Y+ +++ Sbjct 446 GAYDGEMRD 454 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+E+G+ + + + +PT +Q IP L G DVL AETGSGKT AF++P++ Sbjct 77 STFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPIL 136 Query 62 Q 62 Sbjct 137 H 137 >sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1 OS=Caenorhabditis elegans OX=6239 GN=glh-1 PE=1 SV=3 Length=763 Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 90/342 (26%), Positives = 140/342 (41%), Gaps = 57/342 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ +I+ P+RELA+Q N + +K+ + + GG+A +E G I+VGT Sbjct 419 PRCIILTPTRELADQIYN---EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGT 475 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 GR+ G + L + RF VLDEAD ++ + G+ G ++ IV Sbjct 476 VGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGF-----------------GTDIETIV 518 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 S K+ + +M T+ PD+V R + R I Sbjct 519 ---NYDSMPRKENRQTLMFSATF---------PDSVQEAA--------RAFLRENYVMIA 558 Query 466 TDDVHAKDNTR-------PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 D + A + + + E + I Y E + ++F + Sbjct 559 IDKIGAANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAM 618 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L Q + +HG R+ ER + L +F+ G LI T VA RG Sbjct 619 ADTLASIL---------SSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERG 669 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 +DI GV +VIN +PD +Y+HRIGR GR G A S ++ Sbjct 670 LDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRATSFIS 711 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 34/58 (59%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+E + + + V + T IQ ++PL+ G D++ A+TGSGKT AF +P++ Sbjct 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400 >sp|Q5AJD0|DBP5_CANAL ATP-dependent RNA helicase DBP5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP5 PE=3 SV=2 Length=540 Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 104/354 (29%), Positives = 153/354 (43%), Gaps = 97/354 (27%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ L + P+RELA QTL I K+ + + L++ R SV ++VGT Sbjct 221 PQCLCLSPTRELARQTLEVITTMGKFTN---ITTQLVVPNAIPRGS-SV---NAQVLVGT 273 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 PG DL+ +LNLS+++ VLDEAD +L +QG D R+ +P + +Q+++ Sbjct 274 PGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALP------RGVQLVL 327 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT FPT V E VPD Sbjct 328 FSAT---------------FPTEVREYAERLVPD-------------------------- 346 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKI--LKGEYAVRAIKEHKMD------------QAII 511 ANS E+ E + + +K Y ++HK + +II Sbjct 347 -------------ANSLELKQEELNVDGIKQLYMDCRSEQHKFEVLCELYGLLTIGSSII 393 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F K D L G K+GH S LHG +R + ++ F++G + LI Sbjct 394 FVEKKETADVLY-------GKMKKEGHTVSV--LHGGLDNTDRDRLIDDFREGRSKVLIT 444 Query 572 TDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLV 619 T+V ARGIDI V V+N +P +K Y+HRIGR GR R+G++IS + Sbjct 445 TNVLARGIDIASVSMVVNYDMPTDKYGKPDPSTYLHRIGRTGRFGRVGVSISFI 498 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/72 (32%), Positives = 46/72 (64%), Gaps = 2/72 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPV 60 +F E+G+ PE+ + + M + P+ IQ +++PL+L +++ +++G+GKT AFS+ + Sbjct 151 SFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSLTM 210 Query 61 IQIVYETLKDQQ 72 + V T+K Q Sbjct 211 LSRVDPTIKMPQ 222 >sp|O13792|SUB2_SCHPO ATP-dependent RNA helicase uap56 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=uap56 PE=1 SV=3 Length=434 Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 59/339 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN---GVDIVVG 345 L++ +RELA Q N +F KY+ P +R + GG+ + + ++ IVV Sbjct 122 VLVLCHTRELAFQIKNEYARFSKYL--PDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVA 179 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL+ LV L ++ V+ VLDE D LL S + R ++ + T K QV++ Sbjct 180 TPGRLNALVREKILKVNSVKHFVLDECDKLLE---SVDMRRDIQEVFRATPPQK--QVMM 234 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL S +++ + +K M P +++ +D T+H L + +++ Sbjct 235 FSATL-SNEIRPICKKFMQNP--LEIYVDDETKLTLHG---------------LQQHYVK 276 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 ++ +S E +Q +IF ++ + L++ Sbjct 277 LEEKAKNRKINDLLDSLEF----------------------NQVVIFVKSVSRANELDRL 314 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + F +C+HG ER + + FK D R + TDV RGIDI V Sbjct 315 L---------RECNFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVN 365 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VIN +PD +Y+HR+GR GR GLAI+ ++E++ Sbjct 366 IVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEED 404 Score = 40.8 bits (94), Expect = 0.037, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + +Q Sbjct 53 FRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTLQ 111 >sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2 OS=Caenorhabditis elegans OX=6239 GN=glh-2 PE=1 SV=1 Length=974 Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 91/339 (27%), Positives = 149/339 (44%), Gaps = 47/339 (14%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ +I+ P+REL +Q N ++F Y ++R + GG+A +E G I+VGT Sbjct 630 PRCIILTPTRELTDQIYNEGRKFA-YQTMMEIRP--VYGGLAVGYNKGQIEKGATIIVGT 686 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHN--QIPQVTSDGKRLQV 403 GR+ G + L + RF VLDEAD ++ + G+ I+ + N +P+ + Q Sbjct 687 VGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKK----ENRQT 742 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT FP V + + + ++++ ++ K + + + Sbjct 743 LMFSAT---------------FPDSVQEAARNHLKEG--YIMLAID-KIGAANKCVLQEF 784 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + D KD E + I Y E + I+F + D L Sbjct 785 EKCDRSEKKD----------KLLEILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLA 834 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 Q + +HG R+ ER + L +F+ G LI T VA RG+DI G Sbjct 835 SILSSA---------QVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKG 885 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 V +VIN +PD +Y+HRIGR GR G A S ++ + Sbjct 886 VDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATSFISED 924 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/58 (38%), Positives = 34/58 (59%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FSE + + + V + T IQ ++PLI G D++ A+TGSGKT AF +P++ Sbjct 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611 >sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=RRP3 PE=3 SV=1 Length=485 Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 99/358 (28%), Positives = 152/358 (42%), Gaps = 62/358 (17%) Query 283 LPNAPKAL---IVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 L N P++L I+ P+RELA Q + I +R +I+GG+ Q L Sbjct 121 LMNKPQSLFGLILAPTRELACQISEAFEALGSLIS---VRCAVIVGGMDMVSQAISLGKK 177 Query 340 VDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 I+V TPGRL D L +T +L +++LV+DEAD LL + ++++ +P Sbjct 178 PHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLP------ 231 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + + + SAT+ S V+ L + P V S+ + V + L Sbjct 232 RERRTYLFSATMSS-KVESLQRASLSNPLRV------SISSNKYQTVATL------LQSY 278 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 L H + D+ Y V + E+ AI+F RT + Sbjct 279 LFIPH-KYKDI--------------------------YLVYLLNEYAGQSAIVFTRTVNE 311 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 L G F + LHG R L +F+ L+ TDVAARG Sbjct 312 TQRLAILLRALG---------FGSIPLHGQLSQSSRLGALSKFRSRSRDILVATDVAARG 362 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 +DI V V+N LP + + Y+HR+GR RA + G A S+V +VW + ++ GK Sbjct 363 LDIPSVDVVLNFDLPSDSKTYIHRVGRTARAGKSGHAFSIVTQYDIEVWLRIENALGK 420 Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++G++ + +A E + + PT IQAESIPL L G D++ AETGSGKT AF++P++Q Sbjct 60 SFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 119 >sp|Q0UN57|PRP5_PHANO Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=PRP5 PE=3 SV=2 Length=1184 Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 97/360 (27%), Positives = 162/360 (45%), Gaps = 69/360 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIV 343 + P LI+ P+REL+ Q +N +K F ++ + GG DQ+++++ G + I+ Sbjct 616 DGPIGLILAPTRELSLQIVNELKPF---LNASGITIKCAYGGQPISDQIAMIKRGGIHIL 672 Query 344 VGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 T GRL DL+ + L+ ++ ++VLDEAD + G+ + ++ + S Sbjct 673 CATAGRLIDLLQSNSGRVLSFRRITYVVLDEADRMFDMGFEPQVMKI------LASIRPD 726 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHHVVVPVNP----KTDRL 455 Q I+ SAT + L+ K + P V + G V P+ H+ + V P K +L Sbjct 727 RQTILFSATFPKT-MAALARKALDKPAEVIIGGRSKVAPEITQHITI-VPPSYEKKIAKL 784 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC-R 514 LG++ +DD +A Q +IF R Sbjct 785 LHHLGQTF--SDDENA------------------------------------QVLIFTER 806 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 + D L + F K F+ +HG + +R + + FK+G + LI T V Sbjct 807 QETAEDLLSKLF---------KAKYFAVNTIHGAKDQTDRNEAINEFKQGLLNILIATSV 857 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE-KEKVWYHVCSS 633 AARG+D+ G+ V N P ++YVHR GR GRA GLA++L+ +E+ H+ + Sbjct 858 AARGLDVPGLALVYNFDCPTHLEDYVHRCGRTGRAGNKGLAVTLIENPGQERFAVHIVKA 917 Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +++MG++ + + + PT IQA++IP+ G D++ A+TGSGKT AF IP+I+ Sbjct 546 WAQMGLLQQTMDVFTRVGYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRH 605 Query 64 VYE 66 V + Sbjct 606 VLD 608 >sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis (strain RS) OX=246410 GN=RRP3 PE=3 SV=1 Length=474 Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 97/354 (27%), Positives = 145/354 (41%), Gaps = 59/354 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P + L++ P+RELA Q + I +R +I+GG+ Q L I+ Sbjct 114 PQSMFGLVLAPTRELAYQISQQFEALGSLIS---VRCAVIVGGMDMVSQAIALGKKPHII 170 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T +L +++LV+DEAD LL + ++++ +P K + Sbjct 171 VATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLP------KERR 224 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V+ L + P V SV + V + L L Sbjct 225 TYLFSATMSS-KVESLQRASLSNPLRV------SVSSNKYQTVSTL------LQNCLIIP 271 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 H D Y + + E IIF RT + L Sbjct 272 HKHKDI---------------------------YLIYLLNEFPGQSVIIFTRTVNETQRL 304 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 G F + LHG R L +F+ L+ TDVAARG+DI Sbjct 305 AILLRALG---------FGAIPLHGQLSQSARLGALGKFRSRSRNILVATDVAARGLDIP 355 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 V V+N LP + + Y+HR+GR RA + G A SLV ++W + ++ GK Sbjct 356 SVDLVLNYDLPSDSKTYIHRVGRTARAGKSGRAFSLVTQYDVEIWQRIEAALGK 409 Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 46/64 (72%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++G++ + +A + + + PT IQAESIPL L G D++ AETGSGKT AF++P++Q Sbjct 49 SFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 108 Query 63 IVYE 66 + + Sbjct 109 ALMD 112 >sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens OX=9606 GN=DDX46 PE=1 SV=2 Length=1031 Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 155/342 (45%), Gaps = 61/342 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q K+F K + LR + + GG +Q++ L+ G +I+V T Sbjct 446 PIAVIMTPTRELALQITKECKKFSKTLG---LRVVCVYGGTGISEQIAELKRGAEIIVCT 502 Query 347 PGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ D+++ +G++ NL +V ++VLDEAD + G+ + R+ + V D Q Sbjct 503 PGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI---VDNVRPD---RQT 556 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT ++ L+ +I+ P V + G V V V+ + + L H Sbjct 557 VMFSATFPRA-MEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGH 615 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + E S I + K E+A +K+ R C Sbjct 616 YQ-----------------ESGSVIIFVDKQEHADGLLKD--------LMRASYPC---- 646 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + LHG ++R + FK G + L+ T VAARG+D+ Sbjct 647 -------------------MSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKH 687 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + V+N + P+ ++YVHR GR GRA G A + + ++ + Sbjct 688 LILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQAR 729 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/62 (34%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + G+ +I ++++ + PT IQ ++IP I+ G D++ A+TGSGKT AF +P+ Sbjct 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430 Query 61 IQ 62 + Sbjct 431 FR 432 >sp|A7TJK8|PRP5_VANPO Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=PRP5 PE=3 SV=1 Length=872 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 108/377 (29%), Positives = 169/377 (45%), Gaps = 55/377 (15%) Query 255 FVALSKAPDG----YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFK 310 + +SK G YI+ AQ T +K P LI+ P+RELA Q +++F Sbjct 317 LIGISKTGSGKTISYILPMLRQIKAQRTLSKN-ETGPLGLILAPTRELALQINEEVEKFT 375 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS--TGKL-NLSQVRFL 367 K + +R + GG + Q++ L+ GV+IVV TPGRL D+++ +GKL + ++ F+ Sbjct 376 K--QDRSIRTICCTGGSEMKKQINDLKRGVEIVVATPGRLIDILTLNSGKLISTKRITFV 433 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL----QVIVCSATLHSFDVKKLSEKIM 423 V+DEAD L G+ PQ+T K + Q ++ SAT + ++ + +I+ Sbjct 434 VMDEADRLFDMGFE----------PQITQIMKTVRPDKQCVLFSATFPN-KLRSFAARIL 482 Query 424 HFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 P V + + V + V+ + + D+ + RL + D K N +NS E Sbjct 483 TDPLTVTINSNNLVNENVNQSFYIEDNENDK-FNRL----VNILDGFYKVNKNITSNSEE 537 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAII-FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 R I E D+ II F ++ CD L G P Sbjct 538 ---------------REIDEEVSDKKIIIFVSSQQFCDLLYSKLENFGYFP--------- 573 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 +H + ER NLE+FK L+CT+V +RG+++ V VI YVH Sbjct 574 YTIHAGKPYQERVMNLEKFKTTTNSILLCTEVLSRGLNVPEVSLVIIYNAAKTFAQYVHT 633 Query 603 IGRVGRAERMGLAISLV 619 GR R G AI+L+ Sbjct 634 TGRTARGTHKGDAITLL 650 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/65 (31%), Positives = 45/65 (69%), Gaps = 1/65 (2%) Query 1 MAAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ +I + +E+ + PT IQ+++IP I+ G D++ ++TGSGKT ++ +P Sbjct 275 ITRWSQLGLPTDIMNLITKELKYDEPTAIQSQAIPAIMSGRDLIGISKTGSGKTISYILP 334 Query 60 VIQIV 64 +++ + Sbjct 335 MLRQI 339 >sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1 Length=1032 Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 155/342 (45%), Gaps = 61/342 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q K+F K + LR + + GG +Q++ L+ G +I+V T Sbjct 446 PIAVIMTPTRELALQITKECKKFSKTLG---LRVVCVYGGTGISEQIAELKRGAEIIVCT 502 Query 347 PGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ D+++ +G++ NL +V ++VLDEAD + G+ + R+ + V D Q Sbjct 503 PGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI---VDNVRPD---RQT 556 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT ++ L+ +I+ P V + G V V V+ + + L H Sbjct 557 VMFSATFPRA-MEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGH 615 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + E S I + K E+A +K+ R C Sbjct 616 YQ-----------------ESGSVIIFVDKQEHADGLLKD--------LMRASYPC---- 646 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + LHG ++R + FK G + L+ T VAARG+D+ Sbjct 647 -------------------MSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKH 687 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + V+N + P+ ++YVHR GR GRA G A + + ++ + Sbjct 688 LILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQAR 729 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 0/55 (0%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 G+ +I ++++ + PT IQ ++IP I+ G D++ A+TGSGKT AF +P+ + Sbjct 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFR 432 >sp|A6SFV4|DBP8_BOTFB ATP-dependent RNA helicase dbp8 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp8 PE=3 SV=1 Length=545 Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 97/337 (29%), Positives = 142/337 (42%), Gaps = 54/337 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q +QFK L+ +LI GG R Q + L IV+ TPG Sbjct 187 ALVLTPTRELALQIY---EQFKAISSPQSLKAVLITGGSDMRPQATALAQRPHIVIATPG 243 Query 349 RLDDLVSTGKLN----LSQVRFLVLDEADGLLSQG-YSDFINRMHNQIPQVTSDGKRLQV 403 RL D + T + L +VR +VLDEAD LL+ G + + + + KR Q Sbjct 244 RLADHIRTSGEDTIGALRRVRMVVLDEADRLLASGSVGSMLPDVEECLSILPPPAKR-QT 302 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ +AT+ P LK P + V V+ + + L + H Sbjct 303 LLFTATV--------------TPEVRALKDMPRTPGKLPVFVCEVDTQALAIPPSLNQMH 348 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI-IFCRTKIDCDNL 522 ++ H + M+ + E + ++I IFC D L Sbjct 349 LQVPVTHREHYL-------HMF--------------LLTEKNLPKSIVIFCNRTATADYL 387 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + LH +R NL RF+ R L+ TDVAARG+DI Sbjct 388 THLL---------RLLDHRVTALHSKLPQRQRIDNLGRFRASAARILVATDVAARGLDIP 438 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V VIN +P + +Y+HR+GR RA R G A+S V Sbjct 439 EVGLVINYDIPRDPDDYIHRVGRTARAGRKGEAVSFV 475 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AF++P++Q Sbjct 118 FAALNVKPWLVGSLGSMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQ 176 >sp|Q0UK12|RRP3_PHANO ATP-dependent rRNA helicase RRP3 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=RRP3 PE=3 SV=2 Length=546 Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 98/364 (27%), Positives = 155/364 (43%), Gaps = 58/364 (16%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P A LI+ P+RELA Q + I+ ++ ++GG+ Q L I+ Sbjct 181 PQAYFGLIMAPTRELAYQISQQVDALGSIIN---VKCATLVGGMDMVPQAIALSKRPHII 237 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V +PGRL D L +T +L +++LVLDEAD LL + D ++++ +P+ D + Sbjct 238 VASPGRLLDHLENTKGFSLKHLKYLVLDEADRLLDLDFGDSLDKIFKVLPR---DDR--H 292 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V+ L + P V S+ + H VV L +S Sbjct 293 TYLFSATMSS-KVESLQRAALKNPVRV------SISSSSHQVV-----------STLLQS 334 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 ++ P + K Y + + ++ I+F RT + L Sbjct 335 YMLI---------------PHKY-------KDLYLIHLLNDNIGHATILFTRTVNETQRL 372 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 G F + LHG R L +FK L+ TDVAARG+DI Sbjct 373 AVLLRTLG---------FQALPLHGQLSQSNRLGALNKFKAKARDILVATDVAARGLDIP 423 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V V+N LP + + YVHR+GR RA + G A+S V +++ + + GK + Sbjct 424 SVDLVVNFDLPHDSETYVHRVGRTARAGKSGKAVSFVTQYDLEIFQRIEHALGKQVPEEK 483 Query 643 LKED 646 + D Sbjct 484 VSRD 487 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 42/63 (67%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++GV E+ A E + + T IQ ESIPL L G D++ AETGSGKT AF +P++Q Sbjct 117 FADLGVREELCDACENLGYKTATPIQTESIPLALAGKDIIGLAETGSGKTAAFVLPILQA 176 Query 64 VYE 66 + + Sbjct 177 LLD 179 >sp|A3AVH5|RH13_ORYSJ DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0510400 PE=2 SV=2 Length=832 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 95/358 (27%), Positives = 161/358 (45%), Gaps = 24/358 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA+Q +++K+ K++ +++ + I+GG++ Q +L+ +IVVGTP Sbjct 289 RALILTPTRELAKQVCDHLKEAAKFL---RIQVVPIVGGLSMEKQERLLKRKPEIVVGTP 345 Query 348 GRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT-SDGKRLQV 403 GRL +L+STG + L + F VLDEAD ++ +G+ + + +P SD + + Sbjct 346 GRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGT 405 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD-RLWERLGKS 462 T+ +KK + F + L V + TD E L K Sbjct 406 TPSCETVPILQIKK--RQTFVFSATLALSANFRKKLKRGLVTAKASASTDLSSIEALSKQ 463 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKIL----KGEYAVRAIKEHKMDQAIIFCRTKID 518 + D T+ + PE E+ K Y + H + IIFC + Sbjct 464 ARMKPNAEIVDLTK-ASILPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCTSIAA 522 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 +L G + + H + R + ++RF++ + L+ TD ARG Sbjct 523 LRHLSSILRVLG---------INVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARG 573 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 +D V VI+ LP Y+HR GR R G +I+L++ + +Y +C S K Sbjct 574 MDFDDVRTVIHYQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSK 631 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/65 (42%), Positives = 38/65 (58%), Gaps = 1/65 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVI 61 A+ E+ + P + AV + + PT IQ P G DV+ AAETGSGKT AF +P++ Sbjct 199 AWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPIL 258 Query 62 QIVYE 66 Q + E Sbjct 259 QRLLE 263 >sp|A2XVF7|RH13_ORYSI DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_016050 PE=3 SV=2 Length=832 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 95/358 (27%), Positives = 161/358 (45%), Gaps = 24/358 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA+Q +++K+ K++ +++ + I+GG++ Q +L+ +IVVGTP Sbjct 289 RALILTPTRELAKQVCDHLKEAAKFL---RIQVVPIVGGLSMEKQERLLKRKPEIVVGTP 345 Query 348 GRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT-SDGKRLQV 403 GRL +L+STG + L + F VLDEAD ++ +G+ + + +P SD + + Sbjct 346 GRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGT 405 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD-RLWERLGKS 462 T+ +KK + F + L V + TD E L K Sbjct 406 TPSCETVPILQIKK--RQTFVFSATLALSANFRKKLKRGLVTAKASASTDLSSIEALSKQ 463 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKIL----KGEYAVRAIKEHKMDQAIIFCRTKID 518 + D T+ + PE E+ K Y + H + IIFC + Sbjct 464 ARMKPNAEIVDLTK-ASILPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCTSIAA 522 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 +L G + + H + R + ++RF++ + L+ TD ARG Sbjct 523 LRHLSSILRVLG---------INVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARG 573 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 +D V VI+ LP Y+HR GR R G +I+L++ + +Y +C S K Sbjct 574 MDFDDVRTVIHYQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSK 631 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/65 (42%), Positives = 38/65 (58%), Gaps = 1/65 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVI 61 A+ E+ + P + AV + + PT IQ P G DV+ AAETGSGKT AF +P++ Sbjct 199 AWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPIL 258 Query 62 QIVYE 66 Q + E Sbjct 259 QRLLE 263 >sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=2 Length=1032 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 155/342 (45%), Gaps = 61/342 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q K+F K + LR + + GG +Q++ L+ G +I+V T Sbjct 446 PIAVIMTPTRELALQITKECKKFSKTLG---LRVVCVYGGTGISEQIAELKRGAEIIVCT 502 Query 347 PGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ D+++ +G++ NL +V ++VLDEAD + G+ + R+ + V D Q Sbjct 503 PGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI---VDNVRPD---RQT 556 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT ++ L+ +I+ P V + G V V V+ + + L H Sbjct 557 VMFSATFPRA-MEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGH 615 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + E S I + K E+A +K+ R C Sbjct 616 YQ-----------------ESGSVIIFVDKQEHADGLLKD--------LMRASYPC---- 646 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + LHG ++R + FK G + L+ T VAARG+D+ Sbjct 647 -------------------MSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKH 687 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + V+N + P+ ++YVHR GR GRA G A + + ++ + Sbjct 688 LILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQAR 729 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 0/55 (0%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 G+ +I ++++ + PT IQ ++IP I+ G D++ A+TGSGKT AF +P+ + Sbjct 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFR 432 >sp|A5DBI5|DBP5_PICGU ATP-dependent RNA helicase DBP5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP5 PE=3 SV=1 Length=482 Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 97/347 (28%), Positives = 157/347 (45%), Gaps = 70/347 (20%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 PN + + + P+RELA QTL I K+ K+ L++ ++Q + IV Sbjct 161 PNT-QCICLSPTRELARQTLEVITTMGKFT---KVTTQLVVPQAMEKNQGT----QAHIV 212 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQ 402 VGTPG L D++ L +V+ VLDEAD +L QG + R+ +P Q Sbjct 213 VGTPGTLLDMIKRKLLRTGKVKVFVLDEADNMLDGQGLAAQCIRVKKVLPT------SCQ 266 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 +++ SAT + +V+K +EK + ++LK E+ D + + + Sbjct 267 LVLFSATFPT-EVRKYAEKFVPNANSLELKQEELNVDAIKQLYM---------------- 309 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 +S + +E + L G + + +IIF +TK + L Sbjct 310 ---------------DCDSEKHKAEVLSELYGLLTIGS--------SIIFVKTKATANYL 346 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 +G +C LH D ER + ++ F++G + LI T+V ARGIDI Sbjct 347 YAKMKSEG---------HACSILHSDLDNSERDKLIDDFREGRSKVLITTNVLARGIDIA 397 Query 583 GVPYVINVTLPDEKQN------YVHRIGRVGRAERMGLAISLVATEK 623 V V+N +P +K + Y+HRIGR GR R+G+A+S V +K Sbjct 398 SVSMVVNYDIPVDKDDKPDPSTYLHRIGRTGRFGRVGVAVSFVHDKK 444 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/64 (30%), Positives = 42/64 (66%), Gaps = 2/64 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPV 60 +F E+G+ PE+ + + M + P+ IQ +++PL++ +++ +++G+GKT AFS+ + Sbjct 93 SFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSLTM 152 Query 61 IQIV 64 + V Sbjct 153 LSRV 156 >sp|Q75C39|DBP5_EREGS ATP-dependent RNA helicase DBP5 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP5 PE=3 SV=2 Length=466 Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 109/366 (30%), Positives = 155/366 (42%), Gaps = 111/366 (30%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +A+ + PSRELA QTL I++ K+ K+ LI+ +++ I+VG Sbjct 147 ATQAICLAPSRELARQTLEVIQEMGKFT---KIASQLIVPDSYEKNKAI----NAHIIVG 199 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPG + DL+ + L +V+ VLDEAD +L QG D R+ +P+ T Q++ Sbjct 200 TPGTVLDLMRRKMIQLGKVKTFVLDEADNMLDKQGLGDQCIRVKKFLPKDT------QLV 253 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT FD DSV + VV Sbjct 254 LFSAT---FD--------------------DSVREYARRVV------------------- 271 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD----------------- 507 P ANS E+ + E V AIK+ MD Sbjct 272 ------------PNANSLELQ-------RNEVNVSAIKQLFMDCNDERHKFTVLCDLYGL 312 Query 508 ----QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 +IIF +TK + L ++GHQ S LHGD + +R + + F++ Sbjct 313 LTIGSSIIFVQTKQTANMLYTEL-------KREGHQVSI--LHGDLQSADRDRLIGDFRE 363 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAIS 617 G + LI T+V ARGIDI V V+N LP + YVHRIGR GR R G+AIS Sbjct 364 GRSKVLITTNVLARGIDIPTVSMVVNYDLPMTANGQPDPSTYVHRIGRTGRFGRTGVAIS 423 Query 618 LVATEK 623 + +K Sbjct 424 FIHDKK 429 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 41/64 (64%), Gaps = 2/64 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPV 60 +F E+G+ PE+ + + M + P+ IQ ++PL+L +++ +++G+GKT AFS+ + Sbjct 78 SFEELGLAPELLKGLYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTM 137 Query 61 IQIV 64 + V Sbjct 138 LSRV 141 >sp|Q9QY16|DDX25_RAT ATP-dependent RNA helicase DDX25 OS=Rattus norvegicus OX=10116 GN=Ddx25 PE=1 SV=2 Length=483 Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 116/441 (26%), Positives = 188/441 (43%), Gaps = 117/441 (27%) Query 256 VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L+ P I +SQ SG A + + L P+ L + P+ ELA QT ++ Sbjct 130 MMLAHPPQNLIAQSQ-SGTGKTAAFVLAMLNRVNALELFPQCLCLAPTYELALQTGRVVE 188 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD----IVVGTPGRLDDLVSTGKL-NLS 362 + K+ + ++ + I G + + G D IV+GTPG + D KL +L+ Sbjct 189 RMGKFCVDVEV--MYAIRG-------NRIPRGTDVTKQIVIGTPGTVLDWCFKRKLIDLT 239 Query 363 QVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 ++R VLDEAD ++ +QG+SD R+ +P Q+++ SAT V + +E+ Sbjct 240 KIRVFVLDEADVMIDTQGFSDQSIRIQRALP------SECQMLLFSATFED-SVWQFAER 292 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 I+ P + L+ E+ + + V L E R D A N G Sbjct 293 IIPDPNVIKLRKEELTLNNIRQYYV--------LCEN------RKDKYQALCNIYGGIT- 337 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + QAIIFC+T+ + L +Q G HQ S Sbjct 338 ------------------------IGQAIIFCQTRRNAKWLTVEMMQDG-------HQVS 366 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------DE 595 L G+ +R ++RF+ G + LI T+V ARGID+ V V+N LP + Sbjct 367 L--LSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQSEEPD 424 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE 655 + Y+HRIGR GR + GLA +++ +K Sbjct 425 YETYLHRIGRTGRFGKKGLAFNMIEVDK-------------------------------- 452 Query 656 MQLLSEIEEHLNCTISQVEPD 676 + LL +I++H N +I Q++P+ Sbjct 453 LPLLMKIQDHFNSSIKQLDPE 473 >sp|A7TTT5|DBP2_VANPO ATP-dependent RNA helicase DBP2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP2 PE=3 SV=1 Length=441 Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 86/301 (29%), Positives = 138/301 (46%), Gaps = 61/301 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+RELA Q K+ K+ + ++R + GGV Q+ L G +IV+ Sbjct 185 DGPIVLVLAPTRELAVQIQ---KECSKFGSSSRIRNSCVYGGVPRGQQIRELSRGAEIVI 241 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Q + Sbjct 242 ATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTL 295 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVN--PKTDRLWERLGK 461 + SAT +VK+L+ ++ P V + E S + +V V+ K DRL + Sbjct 296 MWSATWPK-EVKQLAHDYLNDPIQVQIGSLELSASHNITQLVEVVSDFEKRDRLLK---- 350 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 H+ T E K + ++F TK CD Sbjct 351 -HLET----------------------------------ASEDKDSKILVFASTKRTCDE 375 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + +Y + G + + +HGD+ ER L+ F++G ++ TDVAARGI + Sbjct 376 VTKYLREDG---------WPALAIHGDKDQRERDWVLQEFREGRSPIMVATDVAARGIGM 426 Query 582 H 582 + Sbjct 427 Y 427 Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G + + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 112 ITSFDEAGFPDYVLEEVKAEGFEKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPG 171 Query 61 I 61 I Sbjct 172 I 172 >sp|Q6C3X7|DBP5_YARLI ATP-dependent RNA helicase DBP5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP5 PE=3 SV=1 Length=488 Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 107/378 (28%), Positives = 163/378 (43%), Gaps = 75/378 (20%) Query 258 LSKAPDGYIVKSQH----SGNAQVTQ-TKFLPN--APKALIVEPSRELAEQTLNNIKQFK 310 LS P I +SQ +G +T ++ PN A + + + PSRELA QTL+ + + K Sbjct 134 LSDPPHNMIGQSQSGTGKTGAFSLTMLSRVDPNLKAVQCICLAPSRELARQTLDVVDEMK 193 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 K+ D + LI+ R Q + I+VGTPG + L+ +++ V+ VLD Sbjct 194 KFTD---ITTHLIVPESTERGQKVTSQ----ILVGTPGSVAGLLQKKQIDAKHVKVFVLD 246 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 EAD ++ R+ +P T QV++ SAT V L+ K+ P + Sbjct 247 EADNMVDSSMGSTCARIKKYLPSST------QVVLFSATFPE-SVLDLAGKMCPNPNEIR 299 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 LK + D + + + E E K Sbjct 300 LKANELNVDAITQLYMDC----------------------------------EDGEEKFK 325 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 +L+ Y++ I ++IF + + L Q K GH+ S LH D Sbjct 326 MLEELYSMLTIA-----SSVIFVAQRSTANALYQRM-------SKNGHKVSL--LHSDLS 371 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIG 604 ER + ++ F+ G + LI T+V ARGIDI V V+N LP +K + Y+HRIG Sbjct 372 VDERDRLMDDFRFGRSKVLISTNVIARGIDIATVSMVVNYDLPTDKNGKPDPETYLHRIG 431 Query 605 RVGRAERMGLAISLVATE 622 R GR R G++IS V E Sbjct 432 RTGRFGRSGVSISFVHDE 449 Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 42/68 (62%), Gaps = 2/68 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPVI 61 F ++G+ + + + M + P+ IQ +++PL+L +++ +++G+GKTGAFS+ ++ Sbjct 101 FEDLGLDENLLKGLYAMKFNKPSKIQEKALPLLLSDPPHNMIGQSQSGTGKTGAFSLTML 160 Query 62 QIVYETLK 69 V LK Sbjct 161 SRVDPNLK 168 >sp|P32892|DRS1_YEAST ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DRS1 PE=1 SV=2 Length=752 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 97/391 (25%), Positives = 179/391 (46%), Gaps = 57/391 (15%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + + +++ P+RELA Q + KQ +++ L +GG+ R Q +L++ DIV+ Sbjct 302 STRVIVLLPTRELAIQVADVGKQIARFVSGITFG--LAVGGLNLRQQEQMLKSRPDIVIA 359 Query 346 TPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR +D + ++ N+ V LV+DEAD +L +G+ D +N + +P Q + Sbjct 360 TPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPS------NRQNL 413 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT++S + V L S+ V ++ P PK + +L + + Sbjct 414 LFSATMNS-----------KIKSLVSL----SLKKPVRIMIDP--PK--KAATKLTQEFV 454 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R + +D+ +P +++ +R + + ++F K L Sbjct 455 R---IRKRDHLKPAL----LFN----------LIRKLDPTGQKRIVVFVARKETAHRLRI 497 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G S LHG +R ++ +FK +V LICTD+A+RG+DI + Sbjct 498 IMGLLG---------MSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKI 548 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV--ATEKEKVWYHVCSSRGKGCYNTR 642 VIN +P + Y+HR+GR RA R G +++ V +++ + S + T+ Sbjct 549 EVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFVGESSQDRSIVRAAIKSVEENKSLTQ 608 Query 643 LKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 K G W +++ +++ E +N TI + Sbjct 609 GKALGRNVDWV-QIEETNKLVESMNDTIEDI 638 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ- 62 F+ + + + + + + ++ P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I+ Sbjct 233 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 292 Query 63 IVYETLK 69 ++Y+ K Sbjct 293 LLYKPAK 299 >sp|A7A0P8|DRS1_YEAS7 ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DRS1 PE=3 SV=1 Length=754 Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 97/391 (25%), Positives = 179/391 (46%), Gaps = 57/391 (15%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + + +++ P+RELA Q + KQ +++ L +GG+ R Q +L++ DIV+ Sbjct 304 STRVIVLLPTRELAIQVADVGKQIARFVSGITFG--LAVGGLNLRQQEQMLKSRPDIVIA 361 Query 346 TPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR +D + ++ N+ V LV+DEAD +L +G+ D +N + +P Q + Sbjct 362 TPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPS------NRQNL 415 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT++S + V L S+ V ++ P PK + +L + + Sbjct 416 LFSATMNS-----------KIKSLVSL----SLKKPVRIMIDP--PK--KAATKLTQEFV 456 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R + +D+ +P +++ +R + + ++F K L Sbjct 457 R---IRKRDHLKPAL----LFN----------LIRKLDPTGQKRIVVFVARKETAHRLRI 499 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G S LHG +R ++ +FK +V LICTD+A+RG+DI + Sbjct 500 IMGLLG---------MSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKI 550 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV--ATEKEKVWYHVCSSRGKGCYNTR 642 VIN +P + Y+HR+GR RA R G +++ V +++ + S + T+ Sbjct 551 EVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFVGESSQDRSIVRAAIKSVEENKSLTQ 610 Query 643 LKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 K G W +++ +++ E +N TI + Sbjct 611 GKALGRNVDWV-QIEETNKLVESMNDTIEDI 640 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ- 62 F+ + + + + + + ++ P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I+ Sbjct 235 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 294 Query 63 IVYETLK 69 ++Y+ K Sbjct 295 LLYKPAK 301 >sp|A6RW56|RRP3_BOTFB ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=rrp3 PE=3 SV=1 Length=486 Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 92/348 (26%), Positives = 152/348 (44%), Gaps = 59/348 (17%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q +QF+ +++ +I+GG+ Q L I+V TPGR Sbjct 132 LVLAPTRELAYQI---SQQFEALGSVIRVKCAVIVGGMDMVPQSIALGKKPHIIVATPGR 188 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L D L +T +L +++LV+DEAD LL + ++++ +P + + + SA Sbjct 189 LLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVLP------RERRTYLFSA 242 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 T+ S V+ L + P V + TV ++ +++I Sbjct 243 TISS-KVESLQRASLKDPLRVSISSNKY--QTVSTLI---------------QNYIFIPL 284 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 +H K Y + + E AIIF RT + + Sbjct 285 IH----------------------KDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRT 322 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 G F + LHG R L +F+ G L+ TDVAARG+DI V V+ Sbjct 323 LG---------FGAIPLHGQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSVDVVL 373 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 N +P + + Y+HR+GR RA + G AIS+V +++ + ++ GK Sbjct 374 NYDVPQDSKTYIHRVGRTARAGKSGHAISVVTQYDLEIFMRIEAALGK 421 Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++G++ + +A + + + PT IQ ESIPL L G D++ AETGSGKT AF++P++Q Sbjct 61 SFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQ 120 Query 63 IVYE 66 + + Sbjct 121 ALLD 124 >sp|Q29S22|DDX47_BOVIN Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus OX=9913 GN=DDX47 PE=2 SV=1 Length=457 Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 90/337 (27%), Positives = 149/337 (44%), Gaps = 60/337 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P AL++ P+RELA Q +QF+ + ++ +I+GG+ + Q L IV Sbjct 92 PQRLFALVLTPTRELAFQI---SEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIV 148 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D L +T NL +++LV+DEAD +L+ + ++++ IP+ D K Sbjct 149 IATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPR---DRK--- 202 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ V+KL + P + + + + + + K Sbjct 203 TFLFSATMTK-KVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSK----------- 250 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 K Y V + E + +IFC T C+N Sbjct 251 -----------------------------FKDTYLVYILNELAGNSFMIFCST---CNNT 278 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 ++ + + F+ + LHG +R +L +FK L+ TDVA+RG+DI Sbjct 279 QRTALLL------RNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIP 332 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 V V+N +P ++Y+HR+GR RA R G AI+ V Sbjct 333 HVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFV 369 Score = 68.9 bits (167), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 30/64 (47%), Positives = 45/64 (70%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++GV + +A +++ W PT IQ E+IPL L G D++ AETGSGKTGAF++P++ Sbjct 28 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 87 Query 64 VYET 67 + ET Sbjct 88 LLET 91 >sp|Q8SQK9|DHH1_ENCCU ATP-dependent RNA helicase DHH1 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=DHH1 PE=3 SV=2 Length=487 Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/352 (27%), Positives = 150/352 (43%), Gaps = 66/352 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKK---YIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + +I+ P RELA Q N+K+ + I P ++GG + +D + + NGV ++V Sbjct 176 QGIILVPIRELALQISRNVKRMSEGTGVISAP------VVGGTSMQDDIIRVSNGVHVMV 229 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DLV LS+ LV DEAD LL + + + ++ + +P + Q++ Sbjct 230 GTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVTKLLDLLP------REKQML 283 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT F V + M P ++L E + P V V P Sbjct 284 LYSATFPYF-VTGFIRRYMKNPLCINLMKELA-PVGVKQFYTYVKP-------------- 327 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 SE + LK +I +Q +IFC + + L Sbjct 328 ---------------------SEKLLCLKSLLLRLSI-----NQCVIFCNSIKTVELLAM 361 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G +H +R F KG + L+ TD+ RG+D Sbjct 362 KITEMG---------LPSYFIHSKMAQEDRNIVFHNFLKGKCKILVATDLITRGVDAPNT 412 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 YVIN + ++Y+HRIGR GR G+AISLV TE++++ + + GK Sbjct 413 NYVINFDISKSPESYLHRIGRAGRFGAPGVAISLVTTEEKEMLMDIEAKLGK 464 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 16/62 (26%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + +G+ P + + + ++ + P+ +Q SIP +LGG ++L+ ++ G+GKT ++ +P++ Sbjct 107 GWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLN 166 Query 63 IV 64 ++ Sbjct 167 MI 168 >sp|Q8W4E1|RH47_ARATH DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH47 PE=1 SV=2 Length=551 Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 96/363 (26%), Positives = 165/363 (45%), Gaps = 44/363 (12%) Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 +S HS N + T+ + A+IV PSREL Q + +++ + ++ + L+ G Sbjct 180 RSSHSENDKRTEIQ-------AMIVAPSRELGMQIVREVEKLLGPVHR-RMVQQLVGGAN 231 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 R + ++ +N IVVGTPGR+ ++ GKL+ RFLVLDE D LLS + + I+R+ Sbjct 232 RMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRI 291 Query 388 HNQIPQVTSDGKR--------LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + + + G + Q I+ SAT+ F V + ++ H P V + P Sbjct 292 LEHVGKRSGAGPKGEVDERANRQTILVSATV-PFSVIRAAKSWSHEPVLV--QANKVTPL 348 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 PV T E G+ + + P A LK Y + Sbjct 349 DTVQPSAPVMSLTPTTSEADGQ-------IQTTIQSLPPA------------LKHYYCI- 388 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK----KGHQFSCVCLHGDRKPHERK 555 + +HK+D + C +D ++ + D + + +HGD R Sbjct 389 SKHQHKVD-TLRRCVHALDAQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRS 447 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 L++FK G+++ L+ +++ARG+D+ V+N+ LP + +Y HR GR GR R G Sbjct 448 TVLKKFKNGEIKVLVTNELSARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTV 507 Query 616 ISL 618 +++ Sbjct 508 VTV 510 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 20/59 (34%), Positives = 40/59 (68%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G+ + ++E + +PTD+Q+ ++P I+ G D ++ + TGSGKT A+ +P++ Sbjct 111 SFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169 >sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii OX=9601 GN=DDX46 PE=2 SV=1 Length=1032 Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 154/342 (45%), Gaps = 61/342 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q K+F K + LR + + GG +Q++ L+ G +I+V T Sbjct 446 PIAVIMTPTRELALQITKECKKFSKTLG---LRVVCVYGGTGISEQIAELKRGAEIIVCT 502 Query 347 PGRLDDLVS--TGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ D+++ +G++ NL +V ++VLDEAD + G+ + R+ + V D Q Sbjct 503 PGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI---VDNVRPD---RQT 556 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT ++ L +I+ P V + G V V V+ + + L H Sbjct 557 VMFSATFPRA-MEALVRRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGH 615 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + E S I + K E+A +K+ R C Sbjct 616 YQ-----------------ESGSVIIFVDKQEHADGLLKD--------LMRASYPC---- 646 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + LHG ++R + FK G + L+ T VAARG+D+ Sbjct 647 -------------------MSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKH 687 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + V+N + P+ ++YVHR GR GRA G A + + ++ + Sbjct 688 LILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQAR 729 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/62 (34%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + G+ +I ++++ + PT IQ ++IP I+ G D++ A+TGSGKT AF +P+ Sbjct 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430 Query 61 IQ 62 + Sbjct 431 FR 432 >sp|Q6CM95|SUB2_KLULA ATP-dependent RNA helicase SUB2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=SUB2 PE=3 SV=1 Length=437 Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 90/334 (27%), Positives = 155/334 (46%), Gaps = 59/334 (18%) Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL---ENGVDIVVGTPGRLD 351 +RELA Q N +F KY+ P ++ + GG ++ + +L E I+V TPGRL Sbjct 130 ARELAYQIRNEYLRFSKYM--PDVKTAVFYGGTEYKNDIDLLSKKETVPHIIVATPGRLK 187 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 LV ++LS V+ V+DE D +L + + R I + T K QV++ SATL Sbjct 188 ALVRDKHIDLSHVKNFVIDECDKVLEELD---MRRDVQDIFRATPRDK--QVMMFSATL- 241 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 S +++ + + + P +++ +D T+H L + +I+ ++ Sbjct 242 SQEIRPICRRFLQNP--LEIFVDDEAKLTLHG---------------LQQYYIKLNE--- 281 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 K+ R A + + + + +Q IIF ++ + + L + Sbjct 282 KEKNRKLA-------------------QLLDDLEFNQVIIFVKSTVRANELTKLL----- 317 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 F + +HG K ER + FK+ + R + TDV RGIDI + IN Sbjct 318 ----NASNFPAITVHGHMKQEERIARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYD 373 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +P+E Y+HR+GR GR GLAIS++++E ++ Sbjct 374 MPNEADQYLHRVGRAGRFGTKGLAISMISSEDDE 407 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + +Q Sbjct 55 FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQ 113 >sp|Q10PV9|RH47B_ORYSJ DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0219700 PE=2 SV=1 Length=573 Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 96/349 (28%), Positives = 155/349 (44%), Gaps = 44/349 (13%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+IV PSREL Q + +++ D +L + L+ G +R + ++ +N IVVGTP Sbjct 212 EAVIVAPSRELGMQIVREVEKILGPNDK-RLVQQLVGGANRSRQEEALKKNKPLIVVGTP 270 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR------- 400 GR+ ++ + GKL+ RFLVLDE D LLS Y + ++R+ + + + R Sbjct 271 GRISEISAGGKLHTHGCRFLVLDEVDQLLSFNYREDMHRILEHVGRKSGTSSRDILGPLA 330 Query 401 ----LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 Q I+ SAT+ F V + + H P V + VP V PV +TD Sbjct 331 RRSERQTILVSATI-PFSVIRAARSWGHDPVLV--RAMSVVPLDSITVPRPVLSQTD--- 384 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE---YAVRAIKEHKMDQAIIFC 513 P + S + A+ L Y + +HK+D + C Sbjct 385 ------------------ANPNSPSNSVNQAAVNSLPPSLEHYYCISKAQHKVD-TLRRC 425 Query 514 RTKIDCDNLEQYFIQQGGGPDK----KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 ++ + + D + LHGD R L++FK G+ R L Sbjct 426 IHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVL 485 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + +++ARG+D+ VIN+ LP + +Y HR GR GR R G +++ Sbjct 486 VTNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTI 534 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G+ P + + + PT++Q+ +IP+I D ++ + TGSGKT A+ +P++ Sbjct 132 SFEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPIL 190 >sp|Q93Y39|RH13_ARATH DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana OX=3702 GN=RH13 PE=2 SV=3 Length=826 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 102/361 (28%), Positives = 168/361 (47%), Gaps = 36/361 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q +++ K N ++ + I+GG+ + Q L+ +IVV TP Sbjct 281 RALIITPTRELALQVTEHLENAAK---NLSVKVVPIVGGMFSEKQERRLKEKPEIVVATP 337 Query 348 GRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT---SDGKRL 401 GRL +L+S G+ + L + F VLDEAD ++ +G+ + + + +P VT ++GK Sbjct 338 GRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLP-VTDKPNEGK-T 395 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDL------KGEDSVPDTVHHVVVPVNPKTDRL 455 Q + + T+ +V K + F + L K + + VN + L Sbjct 396 QTVKSNDTV--LNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNS-IEVL 452 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE---YAVRAIKEHKMDQAIIF 512 ER G D+V D T +P++ IK + E Y + H + I+F Sbjct 453 SERAGMR----DNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIVF 508 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 C + D ++ G L + K R ++++RF+ + LI T Sbjct 509 CTSVTDLRHISGLLKILG---------LDVCTLFSEMKQRARLKSIDRFRASENGILIAT 559 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+ ARGIDI V +I+ LP + YVHR GR RA G +I+L+ + +Y +C Sbjct 560 DLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETSKFYTLCK 619 Query 633 S 633 S Sbjct 620 S 620 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 39/63 (62%), Gaps = 1/63 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLI-LGGGDVLMAAETGSGKTGAFSIP 59 +A+S M + P + +++ +D+ PT IQ + G DV+ AAETGSGKT AF +P Sbjct 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248 Query 60 VIQ 62 ++Q Sbjct 249 ILQ 251 >sp|Q6C799|DBP8_YARLI ATP-dependent RNA helicase DBP8 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP8 PE=3 SV=1 Length=442 Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 96/340 (28%), Positives = 152/340 (45%), Gaps = 60/340 (18%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q +QF N +R LI GGV Q L+ V+ TPGR Sbjct 73 LVLTPTRELAIQI---AEQFTALGANMNIRVALIYGGVDMVKQSLELQKMPHFVIATPGR 129 Query 350 LDDLV-STGKLNLS---QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 L D + S+G+ + +VR++V+DEAD LL+ G+ + + +P D + Q ++ Sbjct 130 LADHIRSSGEDTIRGFRRVRYVVMDEADRLLTPGFVPDLKTCMDLLP----DPSKRQTLL 185 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 +AT+ V+ L ++ KG + + + VP L +S++ Sbjct 186 FTATVTDA-VRALKDRTGE-------KGPPFIHEIASDIAVPST---------LTQSYLF 228 Query 466 TDDVHAKDNTRPG-ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 PG +W A+ +++ AIIF + L + Sbjct 229 L----------PGYVREAYLW-----------AILTHPDNEKKSAIIFVNRTQTAETLRR 267 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + LH + + ER L RF+ R L+ TDVA+RG+DI V Sbjct 268 MLM---------ALDVKTASLHSEMRQQERVNALGRFRAQAARVLVATDVASRGLDIPTV 318 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VIN LP + +Y+HR+GR RA R G ++SLV TE++ Sbjct 319 EMVINFDLPADADDYIHRVGRTARAGRKGQSVSLV-TERD 357 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/59 (36%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F+++G+ + +++ M P+ IQ IP I+ G D + A TGSGKT AF+ P++ Sbjct 2 SFTDLGLPEWLNESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPML 60 >sp|Q2U8K6|DBP5_ASPOR ATP-dependent RNA helicase dbp5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp5 PE=3 SV=1 Length=487 Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 106/405 (26%), Positives = 173/405 (43%), Gaps = 113/405 (28%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA--RDQLSVLENGVDIVV 344 P+ALI+ P+RELA Q + I+ +++D L + V A + S +E+ V VV Sbjct 153 PQALILAPTRELARQIVGVIQCMGQFLDG-----LNVSTAVPADTNSRHSKIESSV--VV 205 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQV 403 GTPG + D++ + ++++ LVLDEAD +L QG D R+ +P K +QV Sbjct 206 GTPGTVMDMIRKRVMVANKLKVLVLDEADNMLDQQGLGDQCIRVKALLP------KDIQV 259 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW---ERLG 460 ++ SAT FPT V H P+ + L E L Sbjct 260 VLFSAT---------------FPTHV------------HQYASKFAPQANELTLQHEELT 292 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I+ + D + K L Y + + +IIF +T+ Sbjct 293 VEGIKQLYLDCSDE-----------EDKYKTLVQLYGLLTVAS-----SIIFVKTRASAA 336 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +E+ + +G + L G + +R +++F+ G + LI T+V ARGID Sbjct 337 EIEKRMVAEG---------HTVASLTGGIEGSQRDAVIDQFRAGQAKVLITTNVLARGID 387 Query 581 IHGVPYVINVTLPD-----------EKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + V VIN +P+ + Q Y+HRIGR GR R+G++IS V+ +E W Sbjct 388 VSTVSMVINYDIPELHQPGAPERQADFQTYLHRIGRTGRFGRVGVSISFVSNREE--W-- 443 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 +L++I+++ NCTI +V+ Sbjct 444 ---------------------------NMLNQIQQYFNCTIQRVD 461 Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 37/58 (64%), Gaps = 2/58 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 +F ++G+ P I Q + M++ P+ IQ ++PL+L +++ +++G+GKT AF + Sbjct 79 SFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVL 136 >sp|Q0CI35|MAK5_ASPTN ATP-dependent RNA helicase mak5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=mak5 PE=3 SV=2 Length=774 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 101/365 (28%), Positives = 162/365 (44%), Gaps = 57/365 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 +P ALI+ P+RELA Q + +I + + R L+ GG++ + Q +L NG DIV+ Sbjct 281 TSPIALILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGGLSVQKQQRLL-NGADIVI 339 Query 345 GTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGY----------------SDFIN 385 GTPGR+ +++S G+ + ++++LV+DEAD LLS+G+ +DF Sbjct 340 GTPGRVWEVLSGGQGLISKMKEIKYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPG 399 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ S +R Q +V SAT H + L +K+ W G D Sbjct 400 AEEDESDDEDSKTQR-QTLVFSATFH----RDLQQKLAGKGKWT---GSD---------- 441 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI----KILKGEYAVRAI 501 + K + + L K + R + D P + E E I + K Y + Sbjct 442 --LMNKQESMEYLLKKLNFREEKPKFID-VNPVSQMAEGLKEGIVECAAMEKDLYLYTLL 498 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 H + ++F + L Q+ + Q + LH R +++ERF Sbjct 499 LYHPKHRTLVFTNSISAVRRLTQFL---------QALQLPALALHSSMAQKARLRSVERF 549 Query 562 KKGDV---RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 L+ TDVAARG+DI G+ +VI+ P YVHR GR RA G ++ + Sbjct 550 SSPTADPSTILVATDVAARGLDIKGIDFVIHYHAPRTADTYVHRSGRTARAGASGKSVII 609 Query 619 VATEK 623 A E+ Sbjct 610 CAPEE 614 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/89 (35%), Positives = 51/89 (57%), Gaps = 0/89 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PEI ++ ++ + PT +Q IP IL G DV+ A TGSGKT AF IP+ Sbjct 201 ISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPILDGHDVVGKASTGSGKTLAFGIPI 260 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLN 89 ++ E + + + K K A +L+ Sbjct 261 LEYYLEKKRRETKNKDDKKETSPIALILS 289 >sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=drs1 PE=3 SV=1 Length=754 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 101/397 (25%), Positives = 166/397 (42%), Gaps = 69/397 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + LI+ P+RELA Q + + + D + L IGG++ + Q L DIV+ TP Sbjct 332 RVLILCPTRELAMQCHSVATKIASFTD---IMVCLCIGGLSLKLQEQELRKRPDIVIATP 388 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + + +V+DEAD +L G++D +N + P K Q ++ Sbjct 389 GRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELNEIIQACP------KSRQTMLF 442 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ V L ++ P V + + + + V V P+ + Sbjct 443 SATMTD-KVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEFVRVRPQRE------------- 488 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +L+ + KE + IIF R+K + F Sbjct 489 ------------------------LLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVIF 524 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + +HG +R + LE F+ G +L+ TDVA+RGIDI G+ Sbjct 525 ---------GLLSLNATEIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEV 575 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 VIN P + Y+HR+GR RA R G AI+L KV V + NT+L Sbjct 576 VINYEAPATHEVYLHRVGRTARAGRSGRAITLAGEGDRKVLKGVF--KNSSAQNTKL--- 630 Query 647 GGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + +N++ E I ++EP ++ +DE Sbjct 631 VNRNLDFNKV-------EKFGKEIEELEPVVQKVLDE 660 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 40/61 (66%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F M + I + + + + +PT IQ ++IPL L G D++ AA TGSGKT AF +P++ Sbjct 259 SSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPIL 318 Query 62 Q 62 + Sbjct 319 E 319 >sp|A7EY76|DBP5_SCLS1 ATP-dependent RNA helicase dbp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp5 PE=3 SV=1 Length=470 Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 90/349 (26%), Positives = 156/349 (45%), Gaps = 71/349 (20%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+AL + PSRELA Q ++ ++++ + + I G V +++ + ++ Sbjct 138 PTTPQALCLAPSRELARQIEGVVRSIGQFVEGLSV-QAAIPGAVERNARVNAM-----VI 191 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQ 402 VGTPG + DL+ ++ SQ++ L LDEAD +L QG D R+ + I K Q Sbjct 192 VGTPGTVMDLIKRKSIDASQMKVLCLDEADNMLDQQGLGDQCLRVKSMI-------KVEQ 244 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 +++ SAT PD V+ +P+ + + Sbjct 245 ILLFSATF---------------------------PDEVYGFAQQFSPRANEI------- 270 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 ++ D++ + + P ++ K E V+ + +IIF + + ++ Sbjct 271 KLKRDELTVSGIKQMFMDCPN------EVGKYEILVKLYGLMTIGSSIIFVKRRDTASHI 324 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + +G H+ + + HG + ER LE F++G + LI T+V ARGID+ Sbjct 325 AERLTAEG-------HKVAAI--HGAFEGAERDTVLEDFRQGKAKVLITTNVLARGIDVQ 375 Query 583 GVPYVINVTLP--------DEKQNYVHRIGRVGRAERMGLAISLVATEK 623 V VIN +P + + Y+HRIGR GR R+G++IS V K Sbjct 376 SVSMVINYDIPMKGRSDFEPDPETYLHRIGRTGRFGRVGVSISFVFDRK 424 Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 39/60 (65%), Gaps = 2/60 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 F ++G+ I + + M++ P+ IQ +++PL+LG +++ +++G+GKT AF I ++ Sbjct 71 FEQLGIDASILKGLYAMNFKKPSKIQEKALPLLLGNPPTNMIAQSQSGTGKTAAFVITIL 130 >sp|Q6CJV1|DRS1_KLULA ATP-dependent RNA helicase DRS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DRS1 PE=3 SV=1 Length=748 Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 90/335 (27%), Positives = 153/335 (46%), Gaps = 54/335 (16%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + + +++ P+RELA Q + K K+++ L L +GG+ R Q L+ DIV+ Sbjct 304 STRVVVLTPTRELAIQVADVGKNIGKFVNG--LTFGLAVGGLNLRQQEQALKTRPDIVIA 361 Query 346 TPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR +D L ++ ++ V LV+DEAD +L +G+ + + + + IP KR Q + Sbjct 362 TPGRFIDHLRNSASFSVDSVEILVIDEADRMLEEGFQEELQEIMSLIP-----SKR-QTL 415 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT++S +K+L + P V ++ P D+L + I Sbjct 416 LFSATMNS-KIKQLISLSLKKP--------------VRIMIDPPKQAADKLTQEF----I 456 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R + +D+ +P ++ +R + + ++F K L Sbjct 457 R---IRKRDHLKPAL----LYQ----------LIRKLDNTSQKRIVVFVARKETAHKLRI 499 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G LHG +R Q++ FK V LICTD+A+RG+DI + Sbjct 500 VLGLLG---------MQVGELHGSLTQEQRLQSVNNFKSLQVPVLICTDLASRGLDIPKI 550 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN +P + Y+HR+GR RA R G +++ V Sbjct 551 EVVINFDMPKTYEIYLHRVGRTARAGREGRSVTFV 585 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/59 (36%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F+ + + + + + + + P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I+ Sbjct 235 FNSLSLSRPVLKGLGSLGYTSPSPIQSAAIPIALLGKDIIAGAVTGSGKTAAFMIPIIE 293 >sp|Q756G5|DBP8_EREGS ATP-dependent RNA helicase DBP8 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP8 PE=3 SV=1 Length=435 Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 91/339 (27%), Positives = 148/339 (44%), Gaps = 61/339 (18%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 +++ P+RELA Q +QF +R L++GG Q L+ ++ TPGR Sbjct 78 IVLTPTRELAMQI---AEQFTALGSVMNIRVALVVGGEDIVSQALELQRKPHFIIATPGR 134 Query 350 LDD-LVSTGKLN---LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 L ++ +G+ L +VR+LVLDEAD LL+ +SD + Q+ ++ Q ++ Sbjct 135 LAHHIMHSGEDTIGGLKRVRYLVLDEADILLTDTFSDALA----TCVQILPPKEKRQNLL 190 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV----PDTVHHVVVPVNPKTDRLWERLGK 461 +AT+ +++++ G+ + + + + VP + +T L Sbjct 191 FTATM--------TDQVLALKDAPPTSGKPPLFSFHVENLDDLAVPASLQTTYLL----- 237 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 PE EA Y V + +E+K AI+F I + Sbjct 238 -------------------VPEHVKEAYL-----YQVLSSEEYKSKSAIVFVNRTISAEI 273 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + +Q + LH ER +L+RF+ R LI TDVA+RG+DI Sbjct 274 LRRMLMQL---------EIRVTSLHSQMPQRERTNSLQRFRANAARVLIATDVASRGLDI 324 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 V V+N +P Y+HR GR RA R G A+S +A Sbjct 325 PAVQLVVNYDIPANPDTYIHRAGRTARAGRGGEALSFIA 363 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F ++GV +A+A+ M PT IQ IP IL G D + A+TGSGKT AF+ P++ Sbjct 6 STFKDLGVAKWLAEALNSMKITQPTTIQKACIPEILAGRDCIGGAKTGSGKTIAFAAPML 65 >sp|Q8SR63|RRP3_ENCCU ATP-dependent rRNA helicase RRP3 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=RRP3 PE=3 SV=1 Length=400 Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 143/332 (43%), Gaps = 61/332 (18%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L+V P+REL+ Q F+ LR L++GG Q + L +VVGTPGR Sbjct 73 LVVAPTRELSSQIAECFNMFQA----TGLRVCLLVGGANFNVQANQLSKRPHVVVGTPGR 128 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 + + ++ T +VR VLDEAD Q DF+ + IP S ++ Q ++ +A Sbjct 129 IAEHVLKTKSFRTERVRKFVLDEADRFFEQ---DFVEDLETIIP---SLREKRQTLLFTA 182 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 T+ S ++ KLS I+ PKT R E Sbjct 183 TM-SDEISKLSSSILK------------------------RPKTIRTAE----------- 206 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 K T P ++ A+K K V ++ + I+F + + + Sbjct 207 ---KYETVPALKEYYLFV-AMK-WKNSALVELLEMSQGMSVIVFVSMCVTARVMSLALAR 261 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 G F LHG+ +R++ + FK+ L+CTD+ +RG+DI V VI Sbjct 262 LG---------FCSEALHGELSQEKREEAMRSFKESRFNVLVCTDLGSRGLDISHVDLVI 312 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 N +P ++Y+HR+GR RA R G AI+LV Sbjct 313 NFDVPKSGKDYIHRVGRTARAGRSGTAITLVT 344 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 22/58 (38%), Positives = 38/58 (66%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++ + + + +E PT++Q + IP +LGGGDV+ ++TGSGKT AF +P++ Sbjct 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIV 60 >sp|A4REU9|MAK5_PYRO7 ATP-dependent RNA helicase MAK5 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=MAK5 PE=3 SV=2 Length=760 Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 114/387 (29%), Positives = 175/387 (45%), Gaps = 72/387 (19%) Query 266 IVKSQHSGNAQVTQTKFLPN----APKALIVEPSRELAEQTLNNIKQF-KKYIDNPKLRE 320 IV+ S NA TQ+K + P AL++ P+RELA Q ++IK +P + Sbjct 245 IVEKWLSINAS-TQSKRVAEGETKTPIALVLSPTRELAHQLTDHIKNLCAGLATSPYV-- 301 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRL-DDLVSTGKL--NLSQVRFLVLDEADGLLS 377 + GG++ Q LE DIVVGTPGRL + L S+ KL ++FLV+DEAD LLS Sbjct 302 CSVTGGLSVHKQQRQLEKA-DIVVGTPGRLWEVLSSSTKLIQAFRGIKFLVVDEADRLLS 360 Query 378 QGYSDFINRMHNQIPQVTSD-------GKRLQVIVCSATLHS-----------FDVKKLS 419 +G+ + + +V +D GK Q +V SAT + FD+ S Sbjct 361 EGHFKDAKDIFEGLDKVETDDDGIIRGGKARQTLVFSATFNKGLQQKLAGKGRFDLATDS 420 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 + + + LK + +P + VNP ++ E L + + GA Sbjct 421 QSMEYL--LKKLKFREEIPK-----FIDVNP-VSQMAEGLKEGIVEC-----------GA 461 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 +++ ++ ++ H + ++F + L +QQ P Sbjct 462 MEKDLYLYSLLLM-----------HPTQRTLVFTNSISSVRRLTP-MLQQLTLP------ 503 Query 540 FSCVCLHGDRKPHERKQNLERF---KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 + LH R +++ERF K G LI TDVAARG+DI G+ VI+ +P Sbjct 504 --VIALHSQMIQKARLRSVERFTSSKPGSASILIATDVAARGLDIRGIDVVIHYHVPRTA 561 Query 597 QNYVHRIGRVGRAERMGLAISLVATEK 623 YVHR GR RA+ GL+I + A E+ Sbjct 562 DAYVHRSGRTARADSSGLSILICAPEE 588 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 38/56 (68%), Gaps = 0/56 (0%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +G+ EI ++ ++ + PT IQA +IP IL G DV+ A TGSGKT AF IP+++ Sbjct 192 LGLSEEIMSSIAKLKFAKPTAIQAATIPEILAGHDVVGKASTGSGKTLAFGIPIVE 247 >sp|Q9UHL0|DDX25_HUMAN ATP-dependent RNA helicase DDX25 OS=Homo sapiens OX=9606 GN=DDX25 PE=1 SV=2 Length=483 Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 108/388 (28%), Positives = 175/388 (45%), Gaps = 85/388 (22%) Query 256 VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L+ P I +SQ SG A +++ L P+ L + P+ ELA QT ++ Sbjct 130 MMLAHPPQNLIAQSQ-SGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVE 188 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI----VVGTPGRLDDLVSTGKL-NLS 362 Q K+ + ++ + I G + + G DI ++GTPG + D KL +L+ Sbjct 189 QMGKFCVDVQV--MYAIRG-------NRIPRGTDITKQIIIGTPGTVLDWCFKLKLIDLT 239 Query 363 QVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 ++R VLDEAD ++ +QG+SD R+ +P Q+++ SAT V +E+ Sbjct 240 KIRVFVLDEADVMIDTQGFSDHSIRIQRALP------SECQMLLFSATFED-SVWHFAER 292 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 I+ P + L+ E+ + + V L E H KD + N Sbjct 293 IIPDPNVIKLRKEELTLNNIRQYYV--------LCE------------HRKDKYQALCN- 331 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + G + QAIIFC+T+ + L IQ G HQ S Sbjct 332 ----------IYGSITI--------GQAIIFCQTRRNAKWLTVEMIQDG-------HQVS 366 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK----- 596 L G+ +R ++RF+ G + LI T+V ARGID+ V V+N LP ++ Sbjct 367 L--LSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPD 424 Query 597 -QNYVHRIGRVGRAERMGLAISLVATEK 623 + Y+HRIGR GR + GLA +++ ++ Sbjct 425 YETYLHRIGRTGRFGKKGLAFNMIEVDE 452 >sp|Q6BME5|SUB2_DEBHA ATP-dependent RNA helicase SUB2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=SUB2 PE=3 SV=2 Length=435 Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 99/355 (28%), Positives = 159/355 (45%), Gaps = 59/355 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG--- 339 +P L++ +RELA Q N +F KY+ P ++ + GG L L+N Sbjct 116 VPGEISTLVICHTRELAYQIRNEYARFSKYM--PDVKTEVFYGGTPITRDLEKLKNKDTC 173 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV+ + L+ ++ V+DE D +L + + R I + T K Sbjct 174 PHIVVATPGRLHALVTEKSIRLNNIKSFVIDECDKVLE---AVDMRRDVQDIFRNTPHQK 230 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SATL S +++ + +K M P +++ +D T+H L Sbjct 231 --QVMMFSATL-SQEIRPVCKKFMQNP--LEIYVDDEAKLTLHG---------------L 270 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + +I+ D+ K+ R S+ + L+ +Q IIF R+ Sbjct 271 QQYYIKLDE---KEKNRK-------LSDLLDSLE------------FNQVIIFVRSTQRA 308 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + F + +H ER + + FK+ + R + TDV RGI Sbjct 309 NELNKLLCSSN---------FPSIAVHSGLPQEERIERYKSFKEFNKRICVSTDVFGRGI 359 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 DI + IN LP+E Y+HR+GR GR GLA+SLV+T+ ++ SR Sbjct 360 DIERINLAINYDLPNEADQYLHRVGRAGRFGTKGLAVSLVSTKDDEEVLEKIQSR 414 Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + +Q Sbjct 53 FRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQ 111 >sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 OS=Dictyostelium discoideum OX=44689 GN=ddx52 PE=3 SV=1 Length=668 Score = 108 bits (269), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 86/332 (26%), Positives = 149/332 (45%), Gaps = 59/332 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +++I+ P+RELA+Q N + K R ++ + + L DI++ TP Sbjct 270 RSVIIAPTRELAQQIYRNFRLLSK---GKPFRICVLSKNLHNQSTNENLIKNYDILITTP 326 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL L+ L+L++V +LV DEAD L + + + ++ I +L++ + S Sbjct 327 LRLVYLIKENLLSLNKVEYLVFDEADKLFDKNFQEQVD-----IVVTACQNPKLKICLFS 381 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT++ V++L IM P + + +++ TV ++ V + +L Sbjct 382 ATMNQ-QVEELGHSIMKNPIKIIIGEQNAAAITVDQKLIYVGKEEGKLL----------- 429 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI-IFCRTKIDCDNLEQYF 526 AVR + + ++ I IF ++K +L Q Sbjct 430 -----------------------------AVRQLIQKGLEPPILIFTQSKERAHDLFQEL 460 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I G D +H +R +R +++F+ G + LICT++ ARG+D GV + Sbjct 461 IFDGINVD---------VIHSERTQFQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNF 511 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 VIN P +Y+HRIGR GRA R G+A +L Sbjct 512 VINFDFPHTLASYIHRIGRTGRAGRPGVAYTL 543 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 4/74 (5%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 M FS++ V + + E+ + P+ IQ + IP++L +V+ A TGSGKT +F Sbjct 194 MTEFSQLENRFKVRKYLLNNINEIGYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTASF 253 Query 57 SIPVIQIVYETLKD 70 SIP++Q +YE K+ Sbjct 254 SIPILQALYEPKKE 267 >sp|A4RGU2|DBP4_PYRO7 ATP-dependent RNA helicase DBP4 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP4 PE=3 SV=1 Length=798 Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 92/341 (27%), Positives = 149/341 (44%), Gaps = 65/341 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA QT +++ ++ L+IGG + R++ L ++I++GTPG Sbjct 124 ALVLSPTRELAVQTFQVLRKIGRH---HLFSAGLVIGGKSVREEAEALSR-MNILIGTPG 179 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T ++ ++ LVLDEAD ++ G+ ++ + +P Q ++ S Sbjct 180 RILQHLDQTHGFDVDNLQLLVLDEADRIMDLGFQRDVDALVQHLPTTR------QTLLFS 233 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGE--DSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT S V L+ + P +V + E + P T+ H++V P+ K D LW Sbjct 234 AT-QSKKVSDLARLSLKDPEYVSVHAEATTATPSTLQQHYIVTPLPEKLDTLW------- 285 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 G + S+ + L VR + E Sbjct 286 --------------GFIKANLKSKMVVFLSSGKQVRFV--------------------YE 311 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + +HG +K R +RF L TDV ARGID G Sbjct 312 SFRQMQPGIP--------LLHMHGRQKQLARLDVTKRFDSSKHACLFATDVIARGIDFTG 363 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V +V+ V P++ +Y+HR+GR R ER G A+ + +E Sbjct 364 VDWVVQVDAPEDTDDYIHRVGRTARYEREGKAVIFLDPSEE 404 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AF+E+ + A+ V + + TDIQA +IPL L G D+L AA+TGSGKT AF +P+++ Sbjct 50 AFAELPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVPLLE 109 Query 63 IVY 65 +Y Sbjct 110 KLY 112 >sp|Q9SA27|RH36_ARATH DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 PE=2 SV=1 Length=491 Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 103/368 (28%), Positives = 161/368 (44%), Gaps = 69/368 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL+V P+RELA Q +QFK LR +I+GG+ Q L + IV+ TPG Sbjct 129 ALVVTPTRELAFQL---AEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPG 185 Query 349 RLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 R+ L+ S+ +FLVLDEAD +L G+ D + + +P K Q ++ Sbjct 186 RIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLP------KSRQTLL 239 Query 406 CSATLHSFDVKKL----SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 SAT+ S +++ L S K + + LK D+ L + Sbjct 240 FSATMTS-NLQALLEHSSNKAYFYEAYEGLKTVDT----------------------LTQ 276 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 I D ++ E++ + IL +++ + A+IF T C Sbjct 277 QFIFEDK-----------DAKELY--LVHILS------QMEDKGIRSAMIFVSTCRTCQR 317 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + + + +H R L +FK G V L+ TDVA+RG+DI Sbjct 318 LSLMLDEL---------EVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDI 368 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC--Y 639 V VIN +P + ++YVHR+GR RA R GLA+S++ K+ + + GK Y Sbjct 369 PTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPY 428 Query 640 NTRLKEDG 647 N ++ D Sbjct 429 NKKVITDS 436 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +G+ + +E+ PT +Q +P IL G DVL A+TGSGKT AF++P++ Sbjct 60 FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119 Query 64 VYE 66 + E Sbjct 120 LAE 122 >sp|A7EIX7|SUB2_SCLS1 ATP-dependent RNA helicase sub2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=sub2 PE=3 SV=1 Length=444 Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 96/352 (27%), Positives = 155/352 (44%), Gaps = 59/352 (17%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + Q + + L++ +RELA Q N ++F ++ P ++ + GGV + VL Sbjct 118 LQQVEVVAGETSVLVMCHTRELAYQIRNEYQRFCHFM--PDVKIGVFYGGVPISKDVEVL 175 Query 337 ENGVD---IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 +N I+VGTPGRL+ LV L L+ V+ VLDE D +L Q + R +I + Sbjct 176 KNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLDECDKMLDQID---MRRDVQEIFR 232 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 T K QV++ SATL S +V+ + +K M P + + E T Sbjct 233 ATPPQK--QVMMFSATL-SQEVRPICKKFMQNPLEIYIDNE-----------------TK 272 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 L + +I+ ++ + N R + E +Q IIF Sbjct 273 LTLYGLQQYYIKLEE--REKNRRLN--------------------ELLDELSFNQVIIFV 310 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 ++ + L++ + F V +H ER + FK + R + TD Sbjct 311 KSTVRATELDKLL---------RECNFPSVAIHSGVSQEERIKRFNDFKDFNKRICVATD 361 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V RGID++ + IN LP + +Y+HR+GR GR GLAIS V+ E ++ Sbjct 362 VFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRFGTKGLAISFVSNEADQ 413 Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E + PE+ +A+ + P+++Q IP + G DVL A++G GKT F + +Q Sbjct 61 FREFLLKPELLRAISWCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLTTLQQ 120 Query 64 V 64 V Sbjct 121 V 121 >sp|Q4WMS3|MAK5_ASPFU ATP-dependent RNA helicase mak5 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=mak5 PE=3 SV=2 Length=777 Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 102/374 (27%), Positives = 164/374 (44%), Gaps = 48/374 (13%) Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 Y+ K + +AQ Q + P ALI+ P+RELA Q +I + R L+ Sbjct 263 YLEKKRDDISAQKEQMSEKDSTPIALILSPTRELAHQLSKHIGELIAQAPGVNARIALLT 322 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYS 381 GG++ + Q +L +G DIV+GTPGR+ +++STG+ + Q++FLV+DEAD LLS+G+ Sbjct 323 GGLSVQKQQRLL-SGADIVIGTPGRVWEILSTGQGLIRKMQQIKFLVVDEADRLLSEGHF 381 Query 382 DFINRMHNQIPQV----TSDGK------------RLQVIVCSATLHSFDVKKLSEKIMHF 425 + + N + +V DG+ Q +V SAT H + L +K+ Sbjct 382 KEVEEILNSLDRVEDGEVPDGEDQASEEESDPSSERQTLVFSATFH----RDLQQKLAGK 437 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 W +G+ ++ D L ++L + + ++ N E Sbjct 438 RKWT--RGD----------IMDKKESMDYLLQKLNFREEKPKFIDMNPISQMADNLKEGI 485 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 E + K + + H + ++F + I +Q P + L Sbjct 486 VECGAMEKDLFLYTLLLYHPKHRTLVFTNS-ISAVRRLTKLLQTLQLP--------ALAL 536 Query 546 HGDRKPHERKQNLERFKKGD---VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 H R +++ERF LI TDVAARG+DI G+ VI+ P YVHR Sbjct 537 HSSMAQKARLRSVERFSSPSSDPSTILIATDVAARGLDIKGIDLVIHYHAPRTADTYVHR 596 Query 603 IGRVGRAERMGLAI 616 GR RA G ++ Sbjct 597 SGRTARAGASGKSV 610 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/82 (38%), Positives = 48/82 (59%), Gaps = 0/82 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PEI + +M + PT +Q IP IL G DV+ A TGSGKT AF IP+ Sbjct 200 VSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQILEGHDVIGKASTGSGKTLAFGIPI 259 Query 61 IQIVYETLKDQQEGKKGKTTIK 82 ++ E +D +K + + K Sbjct 260 LEHYLEKKRDDISAQKEQMSEK 281 >sp|Q0CDT1|DBP5_ASPTN ATP-dependent RNA helicase dbp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp5 PE=3 SV=1 Length=487 Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 98/361 (27%), Positives = 157/361 (43%), Gaps = 80/361 (22%) Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG-GVAARDQLSVLEN 338 T+ + P+ALI+ P+RELA Q + I+ +++DN LIIG V A Sbjct 146 TEQMQKTPQALILAPTRELARQIVGVIQVMGQFLDN------LIIGTAVPADTNNRPARM 199 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSD 397 +VVGTPG + D++ + ++++ LVLDEAD +L QG D R+ +P Sbjct 200 EASVVVGTPGTVMDMIKKRIMVPAKLQVLVLDEADNMLDQQGLGDQCIRVKALLP----- 254 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW- 456 + +QV++ SAT FPT V H P+ + L Sbjct 255 -RTIQVVLFSAT---------------FPTHV------------HQYASKFAPQANELTL 286 Query 457 --ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E L I+ + D + + L Y + + +IIF + Sbjct 287 QHEELTVEGIKQLYLDCSDE-----------EDKYRTLVSLYGLLTVGS-----SIIFVK 330 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 T+ +E+ + +G + L G + +R +++F+ G + LI T+V Sbjct 331 TRQSAMEIEKRMVAEG---------HTVASLTGGIEGSQRDAVIDQFRAGAAKVLITTNV 381 Query 575 AARGIDIHGVPYVINVTLPD-----------EKQNYVHRIGRVGRAERMGLAISLVATEK 623 ARGID+ V VIN +P+ + Q Y+HRIGR GR R+G++IS V+ Sbjct 382 LARGIDVSTVSMVINYDIPELHLPPNQPRQADFQTYLHRIGRTGRFGRVGVSISFVSNRD 441 Query 624 E 624 E Sbjct 442 E 442 Score = 40.8 bits (94), Expect = 0.040, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 38/60 (63%), Gaps = 2/60 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 F ++G+ P I Q + M++ P+ IQ ++PL+L +++ +++G+GKT AF + ++ Sbjct 80 FEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLSNPPKNLVGQSQSGTGKTAAFVLNIL 139 >sp|P21372|PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PRP5 PE=1 SV=1 Length=849 Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 94/347 (27%), Positives = 157/347 (45%), Gaps = 62/347 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + +F + + +R + GG + Q++ L+ G +IVV T Sbjct 331 PMGLILAPTRELALQIHEEVTKFTEA--DTSIRSVCCTGGSEMKKQITDLKRGTEIVVAT 388 Query 347 PGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL-- 401 PGR D+++ GKL + ++ F+V+DEAD L G+ PQ+T K + Sbjct 389 PGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFE----------PQITQIMKTVRP 438 Query 402 --QVIVCSAT----LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH---VVVPVNPKT 452 Q ++ SAT L SF V+ ++H P + + + V + V + + K Sbjct 439 DKQCVLFSATFPNKLRSFAVR-----VLHSPISITINSKGMVNENVKQKFRICHSEDEKF 493 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 D L + + + D+V ++++ G +S +A +AIIF Sbjct 494 DNLVQLIHERSEFFDEVQSEND---GQSSDVEEVDA-------------------KAIIF 531 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 ++ CD + + + G +H + ER NLE+FK+ L+CT Sbjct 532 VSSQNICDFISKKLLNAG---------IVTCAIHAGKPYQERLMNLEKFKREKNSILLCT 582 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V +RG+++ V VI YVH GR R R G AI+L+ Sbjct 583 EVLSRGLNVPEVSLVIIYNAVKTFAQYVHTTGRTARGSRSGTAITLL 629 Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 30/39 (77%), Gaps = 0/39 (0%) Query 26 TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 T IQ++++P I+ G DV+ ++TGSGKT ++ +P+++ V Sbjct 280 TPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQV 318 >sp|Q2TBP1|DDX25_BOVIN ATP-dependent RNA helicase DDX25 OS=Bos taurus OX=9913 GN=DDX25 PE=2 SV=1 Length=483 Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 113/441 (26%), Positives = 186/441 (42%), Gaps = 117/441 (27%) Query 256 VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L+ P I +SQ SG A +++ L P+ L + P+ ELA QT ++ Sbjct 130 MMLAHPPQNLIAQSQ-SGTGKTAAFVLAMLSRVNALKLFPQCLCLAPTYELALQTGRVVE 188 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD----IVVGTPGRLDDLVSTGKL-NLS 362 + K+ + ++ + I G + + G D IV+GTPG + D KL +L+ Sbjct 189 RMGKFCVDVQV--MYAIRG-------NRIPRGTDVTKQIVIGTPGTVLDWCFKRKLIDLT 239 Query 363 QVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 ++R VLDEAD ++ +QG+ D R+ +P Q+++ SAT V + +E+ Sbjct 240 KIRVFVLDEADVMIDTQGFEDQSIRIQRALP------SECQMLLFSATFED-SVWQFAER 292 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 I+ P + L+ E+ + + V R D A N G Sbjct 293 IIPDPNVIKLRKEELTLNNIRQYYVLCGN--------------RKDKYQALCNIYGGIT- 337 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + QAIIFC+T+ + L +Q G HQ S Sbjct 338 ------------------------IGQAIIFCQTRRNAKWLTVEMMQDG-------HQVS 366 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------DE 595 L G+ +R ++RF+ G + LI T+V ARGID+ V V+N LP + Sbjct 367 L--LSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQAEEPD 424 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE 655 + Y+HRIGR GR + GLA +++ +K Sbjct 425 YETYLHRIGRTGRFGKKGLAFNMIEVDK-------------------------------- 452 Query 656 MQLLSEIEEHLNCTISQVEPD 676 + LL +I++H N +I Q++P+ Sbjct 453 LPLLMKIQDHFNSSIKQLDPE 473 >sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0108600 PE=2 SV=2 Length=641 Score = 107 bits (267), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 87/328 (27%), Positives = 135/328 (41%), Gaps = 43/328 (13%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ +++ P+ ELA Q LNN + K R ++ GG + QL L+ +D++ Sbjct 315 PRNPRVVVLTPTAELASQVLNNCRSISK--SGVPFRSMVATGGFRQKTQLESLDQELDVL 372 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 + TPGR L+ G + L+ +R +VLDE D L G F +H I Sbjct 373 IATPGRFLYLLQEGFVQLNNLRCVVLDEVDILY--GEESFEQVLHQLI------------ 418 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 V L+ + + + L + V +T + + P R RL + Sbjct 419 ----------TVAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEIL 468 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + D DN E E K V+ I+E + + IIFC C +E Sbjct 469 V---DCSGDDNE-------EKNPETAFSNKKSALVKIIEESPVRKTIIFCNKIETCRKVE 518 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF---KKGDVRFLICTDVAARGID 580 + D+K Q + H +R N++ F + D FL+CTD A+RGID Sbjct 519 NALRRV----DRKASQIKVLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGID 574 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGR 608 V +V+ P + YV R+GR R Sbjct 575 FANVNHVVLFDYPRDPSEYVRRVGRTAR 602 Score = 41.2 bits (95), Expect = 0.035, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 34/60 (57%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+G EI A+ + P+ IQA + +L G ++ ++GSGKT A+ PV+Q Sbjct 241 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQ 300 >sp|A6ZLH6|PRP5_YEAS7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=PRP5 PE=3 SV=1 Length=849 Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 94/347 (27%), Positives = 157/347 (45%), Gaps = 62/347 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + +F + + +R + GG + Q++ L+ G +IVV T Sbjct 331 PMGLILAPTRELALQIHEEVTKFTEA--DTSIRSVCCTGGSEMKKQITDLKRGTEIVVAT 388 Query 347 PGRLDDLVST--GKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL-- 401 PGR D+++ GKL + ++ F+V+DEAD L G+ PQ+T K + Sbjct 389 PGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFE----------PQITQIMKTVRP 438 Query 402 --QVIVCSAT----LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH---VVVPVNPKT 452 Q ++ SAT L SF V+ ++H P + + + V + V + + K Sbjct 439 DKQCVLFSATFPNKLRSFAVR-----VLHSPISITINSKGMVNENVKQKFRICHSEDEKF 493 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 D L + + + D+V ++++ G +S +A +AIIF Sbjct 494 DNLVQLIHERSEFFDEVQSEND---GQSSDVEEVDA-------------------KAIIF 531 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 ++ CD + + + G +H + ER NLE+FK+ L+CT Sbjct 532 VSSQNICDFISKKLLNAG---------IVTCAIHAGKPYQERLMNLEKFKREKNSILLCT 582 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +V +RG+++ V VI YVH GR R R G AI+L+ Sbjct 583 EVLSRGLNVPEVSLVIIYNAVKTFAQYVHTTGRTARGSRSGTAITLL 629 Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 30/39 (77%), Gaps = 0/39 (0%) Query 26 TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 T IQ++++P I+ G DV+ ++TGSGKT ++ +P+++ V Sbjct 280 TPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQV 318 >sp|A3LP87|DBP8_PICST ATP-dependent RNA helicase DBP8 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP8 PE=3 SV=2 Length=445 Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 90/346 (26%), Positives = 161/346 (47%), Gaps = 75/346 (22%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA L +QF + ++ +++GG Q L+ V+ TPGR Sbjct 73 LVLTPTRELA---LQIAEQFAALGASMNIKISVVVGGEDFVKQTLELQKKPHFVIATPGR 129 Query 350 LDD-LVSTGKLNLS---QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 L D ++++G+ +S ++++LVLDEAD LLS + + R + +P ++ Q + Sbjct 130 LADHILNSGEETISGLRRIKYLVLDEADRLLSNSFGGDLERCFSVLPP----SEKRQTCL 185 Query 406 CSATLHSFDVKKLSEK---------IMHFPTWVDLKGEDSVPDT--VHHVVVPVNPKTDR 454 +AT+ V+ L EK +H VD + ++P T + +V VP Sbjct 186 FTATVTD-AVRALKEKPPAQGKPPVFLHEVETVD---QVAIPSTLSIKYVFVP------- 234 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 S+++ +++ IL+ + +++ A+IF Sbjct 235 -------SYVKEAYLNS-------------------ILR-------LPQYEKSTAVIFVN 261 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 + L + + +F LH + ER +++RFK G R LI TDV Sbjct 262 RTTTAEVLRRTL---------RKLEFRVASLHSEMPQSERTNSVQRFKAGAARILIATDV 312 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 A+RG+DI V V+N +P + +++HR+GR RA R G A++++A Sbjct 313 ASRGLDIPSVELVVNFDIPADPDDFIHRVGRTARAGRSGDAVTIIA 358 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++GV +++A+ M PT IQ+ IP IL G D + A+TGSGKT AF+ P++ Sbjct 2 SFEDLGVSRWLSEALAAMKIHTPTAIQSGCIPKILSGHDCIGGAKTGSGKTIAFAAPML 60 >sp|A4RGD1|RRP3_PYRO7 ATP-dependent rRNA helicase RRP3 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=RRP3 PE=3 SV=1 Length=538 Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 110/419 (26%), Positives = 172/419 (41%), Gaps = 68/419 (16%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q + I LR +++GG+ Q + L IVV TPGR Sbjct 182 LVLAPTRELAAQIGQTFEALGASIS---LRCAVVVGGLDMVSQSTALGKKPHIVVATPGR 238 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L D L T +L ++FLV+DEAD LL + ++++ +P + + + SA Sbjct 239 LLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPILDKILKFLP------RERRTFLFSA 292 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 T+ S V+ L + P V + S TV ++ NP L H + D Sbjct 293 TMSS-KVESLQRASLRDPLKVSVSS--SQEKTVSTLIQ--NP--------LFIPH-KHKD 338 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 V+ + L E+A + I+F RT + + Sbjct 339 VY------------------LIYLANEFAGKT--------TIVFTRTVNEAQRVSILL-- 370 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 + F + LHG R L +FK L+ TDVAARG+DI V VI Sbjct 371 -------RTLSFGAIPLHGQLSQSMRLGALNKFKARSRDILVATDVAARGLDIPEVDLVI 423 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 N +P + Y+HR+GR RA R G AIS++ ++W + + G + D Sbjct 424 NFDMPQDSMTYIHRVGRTARAGRSGRAISIITQYDLELWLRIEKAALNGRKLPLFQPDKE 483 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDI 707 + + E + E + H + + D G V G+KR G + + H D+ Sbjct 484 EVMVFKER--VEEAQRHAREEMKALHED-----RGKKGAVLKGRKR--GSATKRRHDDM 533 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 45/64 (70%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++G++ + +A E + + PT IQ ++IPL L G DV+ AETGSGKT AF++P++Q Sbjct 111 SFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPILQ 170 Query 63 IVYE 66 + E Sbjct 171 SLLE 174 >sp|A5DZT7|DBP10_LODEL ATP-dependent RNA helicase DBP10 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP10 PE=3 SV=1 Length=948 Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 99/361 (27%), Positives = 164/361 (45%), Gaps = 49/361 (14%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+ +A+I+ PSRELA QT +K+F + L+ +++IGG + + + DI+ Sbjct 188 PSGVRAVILSPSRELALQTYKQVKEFSHGTN---LQSIVLIGGDSLEEDFGKMMTKPDII 244 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGR L + +L V+++V DEAD L G+++ +N + +P Q Sbjct 245 VCTPGRFLHLKVEMQYDLMSVQYIVFDEADRLFEMGFAEQLNELLLALPS------NRQS 298 Query 404 IVCSATLHSFDVK------------------KLSEKI-MHFPTWVDLKGEDSVPDTVHHV 444 ++ SATL V+ KLSE + M + T + E ++ + V Sbjct 299 LLFSATLPRSLVEFAKAGLTNPVLVRLDADSKLSENLQMAYFTTKRNEREANLLYILQEV 358 Query 445 V-VPV-NPKTDRLWERLGKSHIRTDDVH--AKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + +P+ P+ + + K I +D+ + AK+ + E + + + Sbjct 359 IKMPLGTPEEVKKLAAMDKRSIESDEENEEAKEQNNGKKRKYKFKKERMP------SAKE 412 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + K IIF TK + + G + ++G H RK L Sbjct 413 LPSEK--STIIFVPTKHHVEYVTSLLKDAG---------YLVSYIYGTLDQHARKNQLYL 461 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G + L+ TDVAARGIDI + VIN TLP + ++HR+GR RA G A S+V Sbjct 462 FRIGLTKILVVTDVAARGIDIPVLANVINFTLPGSSKIFIHRVGRTARAGNKGWAYSIVN 521 Query 621 T 621 + Sbjct 522 S 522 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G + + + + PT IQ SIPLI+ DV+ A TGSGKT AF +P+I+ Sbjct 122 SFASFGFSKFLLANIAKKGYKQPTPIQRRSIPLIIDNRDVVGMARTGSGKTAAFVLPLIE 181 >sp|Q9VIF6|DDX47_DROME ATP-dependent RNA helicase DDX47 OS=Drosophila melanogaster OX=7227 GN=pths PE=1 SV=1 Length=507 Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 95/367 (26%), Positives = 165/367 (45%), Gaps = 66/367 (18%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P AL++ P+RELA Q +QF+ ++ +++GG+ Q L I+ Sbjct 127 PQRYFALVLTPTRELAFQI---GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHII 183 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D L + NL +++LV+DEAD +L+ + ++++ +P + + Sbjct 184 IATPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLP------RERR 237 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH--HVVVPVNPKTDRLWERLG 460 + SAT+ + VKKL + P V++ + + + ++ +PV K Sbjct 238 TFLFSATM-TKKVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYK--------- 287 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 DV Y V + E + +IFC T C+ Sbjct 288 -------DV--------------------------YLVHILNELAGNSFMIFCST---CN 311 Query 521 N-LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 N ++ + + G + + LHG ++R L +FK + LI TDVA+RG+ Sbjct 312 NTVKTALMLRALG-------LAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGL 364 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 DI V V+N +P ++Y+HR+GR RA R G AI+LV+ +++ + GK Sbjct 365 DIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDIELYQRIEHLLGKQLT 424 Query 640 NTRLKED 646 + +ED Sbjct 425 LYKCEED 431 Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 44/63 (70%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + ++G+ + QA +E+ W P+ IQ E+IP+ L G DV+ AETGSGKTGAF++P++ Sbjct 63 WKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHA 122 Query 64 VYE 66 + E Sbjct 123 LLE 125 >sp|Q4I662|DBP8_GIBZE ATP-dependent RNA helicase DBP8 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP8 PE=3 SV=1 Length=547 Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 104/397 (26%), Positives = 167/397 (42%), Gaps = 65/397 (16%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P A A+++ P+RELA Q +QFK L+ +L+ GG R Q + ++ Sbjct 182 PTAIFAVVLTPTRELALQIF---EQFKAISSPQSLKAILVTGGSDMRTQAIEIGKRPHVI 238 Query 344 VGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDG 398 + TPGRL D + T + L +VR++VLDEAD LL + G + + + + Sbjct 239 IATPGRLADHIRTSGEDTICGLRRVRYVVLDEADRLLNATGPGSMLPDVEECLSVLPPAT 298 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 +R Q ++ +AT+ + +V+ L + +P+ P Sbjct 299 ER-QTLLFTATI-TPEVRALKD-------------------------MPIKP-------- 323 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA-VRAIKEHKMDQAII-FCRTK 516 GK + +V + P A +M+ + K Y + E +D+ +I FC Sbjct 324 -GKQPVFVCEVDTQTLAIP-ATLKQMYIKVPVTHKEHYLHTFLLTEANVDKTVILFCNRT 381 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 D L + + LH +R NL RF+ R L+ TDVAA Sbjct 382 STADYLHHLL---------RMLEHRVTSLHSKLPQRQRIDNLARFRASAARILVATDVAA 432 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RG+DI V VIN LP + +Y+HR+GR RA R G A+S V ++ + G+ Sbjct 433 RGLDIPEVSLVINYDLPRDPDDYIHRVGRTARAGRKGEAVSFVGQRDVELALTIEKRVGR 492 Query 637 GC---------YNTRLKEDGGCTIWYNEMQLLSEIEE 664 TR+ D + + + L E+EE Sbjct 493 DMEAWEEEGVNLETRVVRDALKLVSEKKREALLEVEE 529 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/59 (46%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + V P + Q++E M PT IQ IP IL G D + + TGSGKT AF++P++Q Sbjct 118 FSALDVRPWLVQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMAFAVPILQ 176 >sp|Q0TXZ2|SUB2_PHANO ATP-dependent RNA helicase SUB2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=SUB2 PE=3 SV=1 Length=438 Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 88/355 (25%), Positives = 154/355 (43%), Gaps = 61/355 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG---V 340 P L++ +RELA Q N +F K++ P ++ + GG + +L N Sbjct 120 PGVASILVMCHTRELAYQIRNEYNRFAKFL--PDVKVGVFYGGTPVAKDIELLSNKDTHP 177 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV-TSDGK 399 I+VGTPGR++ LV L L+ ++ VLDE D +L Q M N + + + Sbjct 178 HIIVGTPGRINALVRDRHLRLANLKHFVLDECDKMLDQP------DMRNDVQAIFRATPA 231 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SATL S +++ + +K M P + + E + T+H L Sbjct 232 HKQVMMFSATL-SKEIRAVCKKFMQNPLEIYVDDEKKL--TLHG---------------L 273 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + +++ D+ ++ R + + + +Q IIF R+ + C Sbjct 274 QQFYVKLDE---REKNRKLND-------------------LLDNLEFNQVIIFVRSTLRC 311 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 L++ + F +H ER + + FK+ R + TD+ RGI Sbjct 312 TELDKLL---------RECNFPSTAVHSGIGQEERIKRYKEFKEFQTRICVSTDIFGRGI 362 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 D+ + IN +PD+ Y+HR+GR GR GL+IS V+++ ++ R Sbjct 363 DVERINVAINYDMPDKADAYLHRVGRAGRFGTKGLSISFVSSQDDEAVLKAIEER 417 Score = 39.7 bits (91), Expect = 0.096, Method: Compositional matrix adjust. Identities = 18/59 (31%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ +A+ + + P+++Q +IP + G DVL A++G GKT F + +Q Sbjct 54 FRDFLLKDELVRAITDCGFEHPSEVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATLQ 112 >sp|Q81E85|CSHC_BACCR DEAD-box ATP-dependent RNA helicase CshC OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=cshC PE=2 SV=1 Length=389 Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 91/373 (24%), Positives = 155/373 (42%), Gaps = 70/373 (19%) Query 264 GYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 Y++ H N +V Q P+ +++ P+REL Q ++ K+ ++ + Sbjct 51 AYLLPLLHKINPEVKQ-------PQVVVLAPTRELVMQIHEEVQ---KFTAGTEISGASL 100 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 IGG + Q+ L+ ++VG+PGR+ +L+ KL + +V+ +V DE D ++ Q Sbjct 101 IGGADIKRQVEKLKKHPRVIVGSPGRILELIRMKKLKMHEVKTIVFDEFDQIVKQ----- 155 Query 384 INRMHNQIPQVTSDGKR-LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 +M + V R Q++ SAT+ ED+ D Sbjct 156 --KMMGAVQDVIKSTMRDRQLVFFSATMTK-------------------AAEDAARD--- 191 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V P+ R+ KS + ++T E K +Y VR I Sbjct 192 ---LAVEPQLVRVTRAESKSLV--------EHTYIICERRE---------KNDY-VRRIM 230 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +A+ F D + + K + LH + ER+ + F+ Sbjct 231 HMGDVKAVAFLNDPFRLDEITEKL---------KFRKMKAAALHAEASKQEREATMRAFR 281 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G + L+ TD+AARGIDI + +VI++ LPD Y+HR GR GR + G +SLV + Sbjct 282 GGKLEILLATDIAARGIDIDDLTHVIHLELPDTVDQYIHRSGRTGRMGKEGTVVSLVTPQ 341 Query 623 KEKVWYHVCSSRG 635 +E+ G Sbjct 342 EERKLLQFAKKLG 354 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 0/62 (0%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKD 70 P + QA E+ + T+IQ ++IP IL G DV+ + TG+GKT A+ +P++ + +K Sbjct 7 PFLQQAWEKAGFKELTEIQKQAIPTILEGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQ 66 Query 71 QQ 72 Q Sbjct 67 PQ 68 >sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=ROK1 PE=3 SV=1 Length=547 Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 95/341 (28%), Positives = 151/341 (44%), Gaps = 62/341 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPK--LRELLIIGGVAARDQL---SVLENGVDI 342 KAL+V P++ELA Q N + + K L+ L+ A D+L V DI Sbjct 187 KALVVAPTKELASQIFNAVFSLCVGVGKKKDELKPCLLDKSTA--DKLRNGKVSSQKYDI 244 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TP RL ++ G L+L + ++ DEAD L +G++ ++ + P +Q Sbjct 245 CITTPLRLVSALNDGSLDLGSLDLVIFDEADKLFEKGFATQVDDILAACPS------GIQ 298 Query 403 VIVCSATLHSFDVKKLSEKIMHF-PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT+ + V++L+ IM P + + + + TV +V + +L Sbjct 299 KTLFSATIPA-SVEQLANSIMSTDPLRIIIGNKQAAAQTVEQKLVYAGNEEGKL------ 351 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 V + R G ++ + I L+ +A+ F D N Sbjct 352 -------VAIRQMAREG----QLVAPVIIFLQSIDRAKAL----------FKELVFDGIN 390 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 ++Q +HGD +R ++RF+ G+V LICTDV ARGID Sbjct 391 VDQ--------------------IHGDMTAAKRASVIDRFRNGEVWVLICTDVLARGIDF 430 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G+ VIN +P Q+YVHRIGR GRA R+G A++ E Sbjct 431 RGINLVINYDVPQSAQSYVHRIGRTGRAGRLGKAVTFFTKE 471 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + + P + +++ + PT IQ ESIP +L G D++ A TGSGKT A+SIP++++ Sbjct 113 ITRFNLHPYLLANLKKNKYTDPTPIQCESIPTMLNGRDLIACAPTGSGKTMAYSIPMVEM 172 Query 64 V 64 + Sbjct 173 L 173 >sp|Q9QY15|DDX25_MOUSE ATP-dependent RNA helicase DDX25 OS=Mus musculus OX=10090 GN=Ddx25 PE=1 SV=2 Length=484 Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 114/437 (26%), Positives = 184/437 (42%), Gaps = 109/437 (25%) Query 256 VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L+ P I +SQ SG A +++ L P+ L + P+ ELA QT ++ Sbjct 131 MMLAHPPQNLIAQSQ-SGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVE 189 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL-NLSQVRF 366 + K+ + ++ I G R E I++GTPG + D KL +L+++R Sbjct 190 RMGKFCVDVEVM-YAIRGNRIPRGT----EVTKQIIIGTPGTVLDWCFKRKLIDLTKIRV 244 Query 367 LVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 VLDEAD ++ +QG+SD R+ +P Q+++ SAT V + +E+I+ Sbjct 245 FVLDEADVMIDTQGFSDQSIRIQRALP------SECQMLLFSATFED-SVWQFAERIIPD 297 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P + L+ E+ + + V L E R A N G Sbjct 298 PNVIKLRKEELTLNNIRQYYV--------LCEN------RKGKYQALCNIYGGIT----- 338 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + QAIIFC+T+ + L +Q G HQ S L Sbjct 339 --------------------IGQAIIFCQTRRNAKWLTVEMMQDG-------HQVSL--L 369 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------DEKQNY 599 G+ +R ++RF+ G + LI T+V ARGID+ V V+N LP + + Y Sbjct 370 SGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETY 429 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 +HRIGR GR + GLA +++ +K + LL Sbjct 430 LHRIGRTGRFGKKGLAFNMIEVDK--------------------------------LPLL 457 Query 660 SEIEEHLNCTISQVEPD 676 +I++H N I Q++P+ Sbjct 458 MKIQDHFNSNIKQLDPE 474 >sp|Q6H874|RH47A_ORYSJ DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0636300 PE=2 SV=1 Length=573 Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 95/346 (27%), Positives = 153/346 (44%), Gaps = 38/346 (11%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+IV PSREL Q + +++ D +L + L+ G +R + ++ +N IVVGTP Sbjct 212 EAVIVAPSRELGMQIVREVEKILGPNDK-RLVQQLVGGANRSRQEEALKKNKPIIVVGTP 270 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR------- 400 GR+ ++ + GKL+ RFLVLDE D LLS Y + ++R+ + + + R Sbjct 271 GRISEISAAGKLHTHSCRFLVLDEVDQLLSFNYREDMHRILEHVGRKSGTSSRDILGPLA 330 Query 401 ----LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 Q I+ SAT+ F V + + H P V + VP V PV + D Sbjct 331 RRSERQTILVSATI-PFSVIRAARSWGHDPVLV--RAMSVVPLESITVPRPVLSQPDANS 387 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 S + A D+ P Y + +HK+D + C Sbjct 388 NSPSNSVNQA----AVDSLPPSLE--------------HYYCTSKAQHKVD-TLRRCIHA 428 Query 517 IDCDNLEQYFIQQGGGPDK----KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 ++ + + D + LHGD R L++FK G+ R L+ Sbjct 429 LEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTN 488 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +++ARG+D+ VIN+ LP + +Y HR GR GR R G +++ Sbjct 489 ELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTI 534 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G+ P + + + PT++Q+ +IP+I D ++ + TGSGKT A+ +P++ Sbjct 132 SFEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPIL 190 >sp|A1CFV3|DBP5_ASPCL ATP-dependent RNA helicase dbp5 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp5 PE=3 SV=1 Length=487 Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 113/437 (26%), Positives = 182/437 (42%), Gaps = 91/437 (21%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 KN +DLGL I + ++ L G PPK+ V S++ G Sbjct 77 KNFEDLGLDPRILKGLSAMNFRKPSKIQERALPLLLGN-----PPKN-LVGQSQSGTGKT 130 Query 267 VKSQHSGNAQV-TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + ++V T+ + P+ALI+ P+RELA Q + + +++D LIIG Sbjct 131 AAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQIVGVVSVMGQFLDG------LIIG 184 Query 326 GVAARD---QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYS 381 D + LE I VGTPG + D++ + ++++ LVLDEAD +L QG Sbjct 185 TAVPADINNRPKRLE--CSIAVGTPGTVMDMIKRRIMVPNKLKVLVLDEADNMLDQQGLG 242 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 D R+ +P + +QV++ SAT PD V Sbjct 243 DQCIRVKALLP------RDIQVVLFSATF---------------------------PDHV 269 Query 442 HHVVVPVNPKTDRLW---ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 H P + L E L I+ + D + K L Y + Sbjct 270 HAYAAKFAPNANELTLQHEELTVEGIKQLYLDCSDE-----------EDKYKTLVQLYGL 318 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + +IIF +T+ +E+ + +G + L G +R + + Sbjct 319 LTVGS-----SIIFVQTRTSASEIEKRMVAEG---------HTVASLTGGIDVTKRDEII 364 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIGRVG 607 ++F+ G+ + LI T+V ARGID+ V VIN +P+ + Q Y+HRIGR G Sbjct 365 DKFRSGEAKVLITTNVLARGIDVSTVSMVINYDIPELHRPGVPERQADFQTYLHRIGRTG 424 Query 608 RAERMGLAISLVATEKE 624 R R+G++IS V+ +E Sbjct 425 RFGRVGVSISFVSNREE 441 Score = 40.8 bits (94), Expect = 0.041, Method: Compositional matrix adjust. Identities = 18/57 (32%), Positives = 37/57 (65%), Gaps = 2/57 (4%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 F ++G+ P I + + M++ P+ IQ ++PL+LG +++ +++G+GKT AF + Sbjct 79 FEDLGLDPRILKGLSAMNFRKPSKIQERALPLLLGNPPKNLVGQSQSGTGKTAAFVL 135 >sp|Q5ZHZ0|DX39B_CHICK Spliceosome RNA helicase DDX39B OS=Gallus gallus OX=9031 GN=DDX39B PE=2 SV=1 Length=428 Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG+A + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|A2QWW0|MAK5_ASPNC ATP-dependent RNA helicase mak5 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=mak5 PE=3 SV=1 Length=766 Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 97/360 (27%), Positives = 157/360 (44%), Gaps = 47/360 (13%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 AP ALI+ P+RELA Q +I + + R L+ GG++ + Q VL G DIV+ Sbjct 273 TAPIALIMSPTRELAHQLAKHIGELALHAPGSNARIALLTGGLSVQKQQRVL-AGADIVI 331 Query 345 GTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG--- 398 GTPGR+ +++S+G+ +S+++FLV+DEAD LLS+G+ + + +V Sbjct 332 GTPGRVWEVLSSGQGLIRKMSEIKFLVIDEADRLLSEGHFKEAEEILGALDRVEEGNFGG 391 Query 399 ------------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 Q +V SAT H + L +K+ W G D ++ Sbjct 392 EESEDEEKEDARSERQTLVFSATFH----RDLQQKLAGKARWT---GGD---------IM 435 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + L ++L + + ++ E E + K Y + + Sbjct 436 SNKESMEYLLQKLKFREEKPKFIDVNPVSQMAEGLKEGIVECGAMEKDLYLYTLLLYNPK 495 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK---K 563 + ++F + L Q +Q G P + LH R +++ERF Sbjct 496 HRTLVFTNSISAVRRLTQ-LLQNLGLP--------ALALHSSMAQKARLRSVERFSSPTS 546 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 L+ TDVAARG+DI G+ +VI+ P YVHR GR RA G ++ + A E+ Sbjct 547 DPSSILVATDVAARGLDIKGIDFVIHYHAPRAADTYVHRSGRTARAGASGKSVIICAPEE 606 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/77 (42%), Positives = 48/77 (62%), Gaps = 2/77 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +A+ +G+ PEI ++ +M + PT +Q IP IL G DV+ A TGSGKT AF IP++ Sbjct 192 SAWESLGLSPEILTSLSKMKFTTPTLVQKSCIPQILDGHDVIGKASTGSGKTLAFGIPIL 251 Query 62 QIVYETLKDQQEGKKGK 78 + E K +Q+ + GK Sbjct 252 EHYLE--KRRQDLRAGK 266 >sp|Q4PEX7|DBP8_USTMA ATP-dependent RNA helicase DBP8 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP8 PE=3 SV=2 Length=531 Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 108/398 (27%), Positives = 178/398 (45%), Gaps = 76/398 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPK--LRELLIIGGVAARDQLSVLEN-GVDIVVG 345 A+++ P+REL Q +QF + + LR L++GG+ Q S L N ++V Sbjct 109 AVVLTPTRELGVQLH---EQFVAVGEGARMGLRCALVLGGMDMMKQASELANLRPHVIVA 165 Query 346 TPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 TPGRL D + +G + L + +FLVLDEAD LL+ + + +++ +P K LQ Sbjct 166 TPGRLVDHLRSGGGEEWGLRRCKFLVLDEADRLLTDTFKPELEYLYSVLP----SAKTLQ 221 Query 403 VIVCSATLHSFDVKKLSEKIMHF-----------PTWVDLKGEDSVPDTV---------- 441 ++ +ATL +E+++ F P ++ + P+T+ Sbjct 222 TLLFTATL--------TEQVVEFANAKRPEGKPAPMVCKIEMDTKTPETLEQRYVFVPSH 273 Query 442 ------HHVV--VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 +H++ P+ P ++R+ +L H + D ++N R + L Sbjct 274 VREPYLYHILRHPPIKPSSERV-RKLNAKH-QADRERKEENQRKSGKRRRTHHASDSDLD 331 Query 494 GEYAVRAIKEHKMDQAIIF---CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 + + IIF C+T + + + G P+ V LH + Sbjct 332 QDDDAALF----LPATIIFTARCKTAATLSGM----LAELGIPN--------VSLHSHLR 375 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 ER +NL+ F+ V LI TDV +RG+DI V VIN LP Q+YVHR+GR R Sbjct 376 QSERSENLQTFRAQRVPVLIATDVGSRGLDIPDVELVINWDLPSAWQDYVHRVGRTARNG 435 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 + G AIS + TE++ H + NT+L + G Sbjct 436 KRGFAISFI-TERDIDVIHSIEDK----INTKLTQLEG 468 Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 41/59 (69%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS +G+ P + +++ + +PT IQ+ +IP +L G D++ A+TGSGKT F++P++ Sbjct 39 SFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCFALPIL 97 >sp|Q54VT4|DDX47_DICDI Probable ATP-dependent RNA helicase ddx47 OS=Dictyostelium discoideum OX=44689 GN=ddx47 PE=3 SV=1 Length=546 Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 140/343 (41%), Gaps = 67/343 (20%) Query 283 LPNAPKALI---VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 L AP+ L + P+RELA Q + QF ++ +++GG+ + Q L Sbjct 181 LLEAPQGLFCLALAPTRELAYQIAD---QFNAIGSTIGVKTCVLVGGIDSMSQSLALAKK 237 Query 340 VDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 +VVG+PGR L L T NL +++ ++DEAD L S + + +N + IP Sbjct 238 PHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMDEADRLFSADFEEEVNNILKVIP------ 291 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV--HHVVVPVNPKTDRLW 456 K + SAT+ S V KL + P V + + DT+ ++ VP Sbjct 292 KERNTYLFSATMTS-KVAKLQRASLVNPVKVQVASKYQTVDTLLQQYLFVPFK------- 343 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 K Y + E + IIF T Sbjct 344 -----------------------------------YKDCYLAYILNELAGNLTIIFTSTC 368 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + G F + ++GD +R +L +FK+G L+ TDVAA Sbjct 369 ASSTKIAMMLRNLG---------FGAIPINGDMDQGKRLASLNKFKQGTKSILVATDVAA 419 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 RG+DI V VIN +P + YVHR+GR RA G AI++V Sbjct 420 RGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIV 462 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/63 (48%), Positives = 41/63 (65%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +GV P+I A ++ + P +IQ ESIP L G D++ A+TGSGKT AF IPV+Q Sbjct 121 FESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQK 180 Query 64 VYE 66 + E Sbjct 181 LLE 183 >sp|A5DDN0|SUB2_PICGU ATP-dependent RNA helicase SUB2 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=SUB2 PE=3 SV=3 Length=432 Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 95/355 (27%), Positives = 157/355 (44%), Gaps = 59/355 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG--- 339 +P L++ +RELA Q N +F KY+ P ++ + GG+ + L+N Sbjct 113 VPGEITTLVICHTRELAYQIRNEYARFSKYM--PDVKTEVFYGGIPIAKDIEKLKNKDTC 170 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV + L+ V+ V+DE D +L + + R I + T K Sbjct 171 PHIVVATPGRLHALVEEKAIRLNNVKSFVIDECDKVLE---AIDMRRDVQDIFRNTPHQK 227 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SATL S +++ + +K M P +++ +D T+H L Sbjct 228 --QVMMFSATL-SQEIRPVCKKFMQNP--LEIYVDDEAKLTLHG---------------L 267 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + +++ D+ K+ R A+ + + +Q IIF ++ Sbjct 268 QQYYLKLDE---KEKNRKLAD-------------------LLDSLEFNQVIIFVKSTSRA 305 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + + F + +H ER + FK+ + R + TDV RGI Sbjct 306 NELNKLLV---------ASNFPSIAVHSAMPQEERIARYKSFKEFNKRICVSTDVFGRGI 356 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 DI + IN LP+E Y+HR+GR GR GLAIS V +++++ SR Sbjct 357 DIERINLAINYDLPNEADQYLHRVGRAGRFGTKGLAISFVGSKEDEEVLEKIQSR 411 Score = 39.7 bits (91), Expect = 0.085, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + +Q Sbjct 50 FRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQ 108 >sp|Q4P7Z8|DBP5_USTMA ATP-dependent RNA helicase DBP5 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP5 PE=3 SV=1 Length=456 Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 97/388 (25%), Positives = 164/388 (42%), Gaps = 80/388 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDIVVG 345 P+A+ + PSRELA Q ++ + K+ + + + D++ E +++G Sbjct 135 PQAIALAPSRELARQIMDVARTMSKFTN--------VTTCLCLPDEVKRGEKITAQLIIG 186 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPG+ D++ + ++ + ++ VLDEAD +L Q + R+ N +P K Q++ Sbjct 187 TPGKTFDMIKSKGIDTAAIKVFVLDEADNMLDQQSLGEQSIRVKNTMP------KSCQLV 240 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL---WERLGK 461 + SAT FPT V+ V + P + + E L Sbjct 241 LFSAT---------------FPT------------NVYDFAVRIAPGANEIRLKQEELSV 273 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 I+ + KD K E V + Q+IIFC + D Sbjct 274 EGIKQFYMDCKDEDH----------------KYEVLVELYNLLTIGQSIIFCAKRETADR 317 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + Q Q+G D LHG + +R + ++ F+ G + LI T+V ARGIDI Sbjct 318 IAQKMTQEGHKVD---------SLHGRLETADRDRTIDAFRDGKSKVLISTNVIARGIDI 368 Query 582 HGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-SR 634 V VIN +P + + Y+HRIGR GR R G++I+ V ++ W ++ + Sbjct 369 QQVTLVINYDMPLTQTGEADAETYLHRIGRTGRFGRKGVSINFV--HDQQSWSYMDQIEK 426 Query 635 GKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 C TR+ + + Y + L +I Sbjct 427 ALKCQITRVATNDLEEMEYTIKEALKQI 454 >sp|P0CQ96|SUB2_CRYNJ ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=SUB2 PE=3 SV=1 Length=442 Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 97/339 (29%), Positives = 154/339 (45%), Gaps = 59/339 (17%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV---AARDQLSVLENGVDIVVGT 346 +I+ +RELA Q N +F K++ N +R + GG A ++ L+ E IVVGT Sbjct 131 IILCHTRELAYQIKNEFTRFSKFMTN--VRTGVFYGGTPISADQEILANKEKCPHIVVGT 188 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR LV KLN S+V+ VLDE D +L Q + R +I + T K QV++ Sbjct 189 PGRTMALVRDKKLNASKVKHFVLDECDKMLEQLD---MRRDVQEIFRATPHHK--QVMMF 243 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S D++ +K M P +++ +D T+H + + + +L + Sbjct 244 SATL-SKDIRATCKKFMQSP--LEIYVDDETKLTLHGL--------QQFYLKLEEREKNR 292 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 DN + +Q IF ++ L+ Sbjct 293 KLNDLLDNL-----------------------------EFNQVCIFVKSVQRATQLDA-L 322 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +Q+ P +C+H + ER ++FK + R L+ TD+ RGID+ V Sbjct 323 LQECNFPS--------ICIHSGLQQAERISRFQQFKAFEKRILVATDIFGRGIDVERVNV 374 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 VIN P + +Y+HR+GR GR GLAIS V+++ ++ Sbjct 375 VINYDAPSDADSYLHRVGRAGRFGTKGLAISFVSSDADQ 413 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/59 (34%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+ +A+ ++ + P+++Q E IP + G DVL A++G GKT F + +Q Sbjct 61 FRDFLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAALQ 119 >sp|P0CQ97|SUB2_CRYNB ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=SUB2 PE=3 SV=1 Length=442 Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 97/339 (29%), Positives = 154/339 (45%), Gaps = 59/339 (17%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV---AARDQLSVLENGVDIVVGT 346 +I+ +RELA Q N +F K++ N +R + GG A ++ L+ E IVVGT Sbjct 131 IILCHTRELAYQIKNEFTRFSKFMTN--VRTGVFYGGTPISADQEILANKEKCPHIVVGT 188 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR LV KLN S+V+ VLDE D +L Q + R +I + T K QV++ Sbjct 189 PGRTMALVRDKKLNASKVKHFVLDECDKMLEQLD---MRRDVQEIFRATPHHK--QVMMF 243 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL S D++ +K M P +++ +D T+H + + + +L + Sbjct 244 SATL-SKDIRATCKKFMQSP--LEIYVDDETKLTLHGL--------QQFYLKLEEREKNR 292 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 DN + +Q IF ++ L+ Sbjct 293 KLNDLLDNL-----------------------------EFNQVCIFVKSVQRATQLDA-L 322 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +Q+ P +C+H + ER ++FK + R L+ TD+ RGID+ V Sbjct 323 LQECNFPS--------ICIHSGLQQAERISRFQQFKAFEKRILVATDIFGRGIDVERVNV 374 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 VIN P + +Y+HR+GR GR GLAIS V+++ ++ Sbjct 375 VINYDAPSDADSYLHRVGRAGRFGTKGLAISFVSSDADQ 413 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/59 (34%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+ +A+ ++ + P+++Q E IP + G DVL A++G GKT F + +Q Sbjct 61 FRDFLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAALQ 119 >sp|Q754U8|PRP5_EREGS Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=PRP5 PE=3 SV=2 Length=855 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 93/350 (27%), Positives = 151/350 (43%), Gaps = 56/350 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q + +F +P +R L GG + Q++ ++ GV+IV+ T Sbjct 351 PLGLILSPTRELALQIHEEVTKFTS--GDPSIRSLCCTGGSELKRQINDIKRGVEIVIAT 408 Query 347 PGRLDDLVSTGKLNL---SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR DL+S NL ++ F+V+DEAD L G+ + NQI + K Q Sbjct 409 PGRFIDLLSLNSGNLINPKRIVFVVMDEADRLFDLGFEPQV----NQIMKCIRPDK--QC 462 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT + +K + KI+H P ++ + + + + + V + + D+ KS Sbjct 463 VLFSATFPN-KLKSFASKILHDPVYITVNSKSLINENIEQKVEIFSNEEDKF-----KSL 516 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I H T+ N ++ I+F ++ CD L Sbjct 517 I-----HWLALTQQNLND-------------------------EKTIVFVSSQQICDILY 546 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G F+ +H + ER NL+ FK+ LICT+V +RG+++ Sbjct 547 NRLEANG---------FTTFAIHAGKIYTERAWNLKCFKETANGILICTEVLSRGLNVPE 597 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 V VI YVH GR R G A++L+ + Y + S Sbjct 598 VSLVIIYNAAKTFAQYVHTTGRTARGSNKGTALTLLMNTELAASYILMKS 647 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 44/62 (71%), Gaps = 1/62 (2%) Query 4 FSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +S++G+ I + E+++ +PT IQA++IP I+ G DV+ ++TGSGKT +F +P+++ Sbjct 277 WSQLGLNSGIMNLLTRELEFTVPTPIQAQAIPAIMSGRDVIGISKTGSGKTVSFILPLLR 336 Query 63 IV 64 + Sbjct 337 QI 338 >sp|Q9FZ92|RH44_ARATH Putative DEAD-box ATP-dependent RNA helicase 44 OS=Arabidopsis thaliana OX=3702 GN=RH44 PE=5 SV=2 Length=622 Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 95/343 (28%), Positives = 156/343 (45%), Gaps = 45/343 (13%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+RELA Q +F +Y+ + + I G + Q L G +IV+ T Sbjct 287 PYALVMVPTRELAHQIEEETVKFSRYLG---FKAVSITGWESIEKQALKLSQGCEIVIAT 343 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL D + + L+Q +LVLDEAD ++ + PQV+ + L V+ C Sbjct 344 PGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFE----------PQVS---EVLDVMPC 390 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 S + ++L EK ++ T++ +++ V ERL + +R Sbjct 391 SNLKPEKEDEELEEKKIYRTTYM----------FSATMLLSV--------ERLARKFLRN 432 Query 467 DDV-HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 V + T+ M E+ K + + + + + K AI+F T+ D + + Sbjct 433 PVVVTIGETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKT--AIVFVNTRNKVDYIVKN 490 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G + LH + +R +LE FKK L+ TDV RG+DI + Sbjct 491 LEKVG--------RCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLA 542 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 VIN +P+ Y HRIGR GRA + G+A + + E + V+Y Sbjct 543 QVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFY 585 Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 23/34 (68%), Gaps = 0/34 (0%) Query 31 ESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 E+IPL L DV+ + TGSGKT AF +P++ + Sbjct 239 ETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYI 272 >sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rrp3 PE=3 SV=1 Length=465 Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 141/348 (41%), Gaps = 60/348 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P L++ P+RELA Q + I +R +I+GG+ Q L I+ Sbjct 112 PQTLFGLVLAPTRELAYQISQAFETLGSTIG---VRCAVIVGGMDMVAQSIALGKKPHII 168 Query 344 VGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V TPGRL D L +T +L +++L +DEAD LL + + ++++ +P+ Sbjct 169 VATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRILPRTR------H 222 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V+ L + P V + + T+ + + K L Sbjct 223 TYLFSATM-STKVESLQRASLSNPVRVSVSSKYQTVSTLQSSYICIPHKHKNL------- 274 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 Y V + E AIIF T + + Sbjct 275 ---------------------------------YLVYLLNEFAGQSAIIFTTTVHETQRV 301 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 F+ + G F + LHG R L +F+ L+ TDVAARG+DI Sbjct 302 A--FMLRALG-------FGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIP 352 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V V N LP + + Y+HR+GR RA + G+AIS V +VW + Sbjct 353 SVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQYDVEVWLRI 400 Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/64 (47%), Positives = 47/64 (73%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+G++ ++ +A E M + PT IQ+++IPL L G DV+ AETGSGKT AF++P++Q Sbjct 47 SFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQ 106 Query 63 IVYE 66 + E Sbjct 107 ALME 110 >sp|Q6FML5|PRP5_CANGA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=PRP5 PE=3 SV=1 Length=816 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 90/340 (26%), Positives = 147/340 (43%), Gaps = 65/340 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I P+RELA Q +N ++ +K I + + + GG + Q+ L+ GV+I + T Sbjct 327 PIAVIFAPTRELAVQ-IN--EEVQKLISDLDISSICCTGGSDLKKQIDKLKTGVEIAIAT 383 Query 347 PGRLDDLVSTGKLNLS---QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL-- 401 PGR DL+S NL ++ F+V+DEAD L G+ PQ+ S + + Sbjct 384 PGRFIDLLSLNGGNLVSTLRISFVVMDEADRLFDFGFE----------PQIASVLRTVRP 433 Query 402 --QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q ++ SAT S V + + + P + + E V + ++ + ++D+ E L Sbjct 434 DRQCVLFSATFPS-KVSNFASRFLDSPLQITVNAEGMVNERINQKFTICSDESDKFKELL 492 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 +K+ E ++ IIF ++ C Sbjct 493 S---------------------------LLKVFNSETV--------DEKTIIFVSSQQIC 517 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D +E+ + +H R +ER+QNLE FKK L+CT+V +RG+ Sbjct 518 DIIEKRLT---------DYSEKLYSIHAGRPYNERRQNLELFKKTSNSILLCTEVMSRGL 568 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 ++ V VI YVH GR R R G +ISL+ Sbjct 569 NVPEVSRVILYNSAKTFAQYVHSTGRTARGTREGTSISLL 608 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 52/80 (65%), Gaps = 5/80 (6%) Query 1 MAAFSEMGVMPEIAQAVEEM-DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ +I + ++++ + T IQ ++IP I+ G DV+ ++TGSGKT ++ +P Sbjct 250 VTKWSQLGIPYDIIRFIKDVFSYKSLTPIQTQTIPAIMSGRDVIGISKTGSGKTISYLLP 309 Query 60 VIQIVYETLKDQQEGKKGKT 79 +I+ V K Q++ + G+T Sbjct 310 MIRHV----KAQKKLRNGET 325 >sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DRS1 PE=3 SV=2 Length=705 Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 89/344 (26%), Positives = 155/344 (45%), Gaps = 69/344 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 +A + +++ P+RELA Q + K+ +++ N L L +GG+ R Q L++ DIVV Sbjct 268 SATRVIVLTPTRELAIQVCDVGKKLGQFVAN--LNFGLAVGGLNLRQQEQQLKSRPDIVV 325 Query 345 GTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 TPGRL D + ++ ++ + LV+DEAD +L +G+ + + IP+ + Q Sbjct 326 ATPGRLIDHIRNSPSFSIENLEVLVMDEADRMLEEGFQVELTEILELIPK-----HKRQT 380 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT+++ ++ L + + P V + VNP Sbjct 381 MLFSATMNT-KIQDLIQLSLDKP-----------------VRIMVNP------------- 409 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA--------VRAIKEHKMDQAIIFCRT 515 P + ++ E ++I K E+ +R + + ++ ++F Sbjct 410 -------------PKQAASKLVQEFVRIRKREHLKPALLYHLLRLVDPQQQNRIVVFVSR 456 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K L G LHG +R Q+++ F+ V LICTD+A Sbjct 457 KEMAHRLRIVLGLLG---------MKVSELHGSLTQEQRLQSVKDFRSLAVPVLICTDLA 507 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 ARG+DI + VIN +P + Y+HR+GR RA R G +I+ V Sbjct 508 ARGLDIPKIEIVINFDMPKTHEIYLHRVGRTARAGREGRSITFV 551 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F + + + + V + + +P+ IQA SIP+ + G D++ A TGSGKT A+ IP+ Sbjct 197 ITSFQALQLSRPLLKGVGNLGYTVPSAIQAASIPIAMMGKDIVAGAVTGSGKTAAYLIPI 256 Query 61 IQ-IVYE 66 I+ ++Y+ Sbjct 257 IERLIYK 263 >sp|O60173|DBP7_SCHPO ATP-dependent RNA helicase dbp7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp7 PE=3 SV=1 Length=709 Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 101/363 (28%), Positives = 162/363 (45%), Gaps = 69/363 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL---IIGGVAARDQLSVLENGVDIVVG 345 A+I+ P+REL +Q N + +NP ++ +IGG + + + + GV+I++G Sbjct 219 AVIMAPTRELCQQIYNVANKLN---NNPLSHWIVSCNVIGGEKKKSEKARIRKGVNILIG 275 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK----- 399 TPGRL D L +T L++SQVR++VLDE D L+ G+ + + ++ + + +S K Sbjct 276 TPGRLADHLENTEALDVSQVRWVVLDEGDRLMDMGFEETLTKILSYLESQSSIIKKDLSI 335 Query 400 --RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK-------GEDSVPDTV--HHVVVPV 448 R ++CSAT+ VK+LS+ + ++ G P+ + +VVVP Sbjct 336 PSRKVTMLCSATMKD-TVKRLSDSALKDALYLKSSIVEETNDGYSQAPEQLLQRYVVVPP 394 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + L L +SH+R+ + + I L +V D Sbjct 395 KLRLVSLVALL-RSHVRS------------------YKKIIIFLSCSDSV--------DF 427 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS------------CVCLHGDRKPHERKQ 556 R I+ D +E+ ++ PD +G S LHG R Sbjct 428 HFEAFRCAINADEMEEAVKEK---PDSEGDIISNAPALRIDGKSNVYRLHGSLSQQIRTS 484 Query 557 NLERFKKGD---VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 L F + L+CTDVAARG+D+ V V+ P +Y+HRIGR RA G Sbjct 485 TLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLHRIGRTARAGHNG 544 Query 614 LAI 616 AI Sbjct 545 AAI 547 Score = 37.0 bits (84), Expect = 0.67, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%) Query 19 EMDWLLPTDIQAESIPLILGGGD--VLMAAETGSGKTGAFSIPVIQ 62 +M+ PT IQ+ +P +L D + A+TGSGKT A+ +P++Q Sbjct 156 KMNISAPTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQ 201 >sp|Q8VDW0|DX39A_MOUSE ATP-dependent RNA helicase DDX39A OS=Mus musculus OX=10090 GN=Ddx39a PE=1 SV=1 Length=427 Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 91/337 (27%), Positives = 156/337 (46%), Gaps = 57/337 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N +VVGTP Sbjct 115 VLVMCHTRELAFQISKEYERFSKYM--PSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTP 172 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ LV + LNL V+ VLDE D +L Q + R +I ++T K Q ++ S Sbjct 173 GRILALVRSRSLNLRNVKHFVLDECDKMLEQLD---MRRDVQEIFRLTPHEK--QCMMFS 227 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL S +++ + K M P V + E + T+H L + +++ Sbjct 228 ATL-SKEIRPVCRKFMQDPMEVFVDDETKL--TLHG---------------LQQYYVKLK 269 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 D ++ N + + + +L+ +Q +IF ++ C L Q + Sbjct 270 D--SEKNRK--------LFDLLDVLE------------FNQVVIFVKSVQRCMALAQLLV 307 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +Q F + +H ER ++FK R L+ T++ RG+DI V V Sbjct 308 EQN---------FPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIV 358 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 N +P++ Y+HR+ R GR GLA++ V+ E + Sbjct 359 FNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEND 395 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 44 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 103 Query 62 Q 62 Q Sbjct 104 Q 104 >sp|A7TK63|DBP8_VANPO ATP-dependent RNA helicase DBP8 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP8 PE=3 SV=1 Length=431 Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 94/347 (27%), Positives = 152/347 (44%), Gaps = 67/347 (19%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+ +++ P+RELA Q +QF + +R L++GG + Q L+ + Sbjct 68 PSGMFGVVLTPTRELAIQI---AEQFTALGSSMNIRVCLVVGGESIVKQALELQKKPHFI 124 Query 344 VGTPGRL-DDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 + TPGRL ++S+G+ LS+V++LVLDEAD +L+Q ++ ++ ++P + Sbjct 125 IATPGRLAHHILSSGEEVVGGLSRVKYLVLDEADLILTQTFAADLSTCIAKLP----PKQ 180 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP-------DTVHHVVVPVNPKT 452 + Q ++ +AT+ V+ L + +DS P + V +V VP K Sbjct 181 KRQTLLFTATITD-QVRALQ----------NAPAQDSKPPLFAYEVENVDNVAVPSTLKL 229 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 + L PE EA Y + +++K I+F Sbjct 230 EYLL------------------------VPEHVKEAYL-----YQLLTCEDYKDSSVIVF 260 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 + L + + + LH ER +L+RF+ R LI T Sbjct 261 VNRTTAAEVLRRTL---------RSLEVRVASLHSQMPQSERINSLQRFRANAARVLIAT 311 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 DVAARG+DI V VIN +P + ++HR GR RA R G AIS V Sbjct 312 DVAARGLDIPTVELVINYDIPQDPDTFIHRSGRTARAGRSGDAISFV 358 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F +G+ + +++ M PT IQ IP IL G D + A+TGSGKT AF+ P+ Sbjct 1 MQDFKSLGLSRWLVESLNAMRITHPTAIQKHCIPEILKGRDCIGGAKTGSGKTIAFAGPM 60 Query 61 I 61 + Sbjct 61 L 61 >sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4 OS=Caenorhabditis elegans OX=6239 GN=glh-4 PE=1 SV=2 Length=1156 Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 87/350 (25%), Positives = 164/350 (47%), Gaps = 61/350 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIV 343 +P+ LIV P+REL QT +Q L+ L GG + + L + ++I+ Sbjct 814 SPRLLIVAPTRELVNQTFTTARQLTYET---GLKCGLAFGGYSRNANVQHLRSFSQLNIL 870 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQ 402 V T GRL D V+ G+++LS+++++VLDEAD ++ S + + ++++ + S G+R Q Sbjct 871 VATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKI------IGSPGERTQ 924 Query 403 VIVCSATLHSFDVKK--LSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 V + S D++ L + + T + + + + + ++PV P+T++ Sbjct 925 QTVLFSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTANEKIDQKILPV-PRTEKR----- 978 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG--EYAVRAIKEHKMDQ--AIIFCRTK 516 +AI L G E V + + +++ +IF + Sbjct 979 --------------------------DAIYKLLGIDENTVTLLPDAPIEKQKTLIFVNSV 1012 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 CD L G S + +H + +R + L+ F++G + ++ ++V A Sbjct 1013 KFCDTLAALISSAG---------VSTISMHSYQNQEQRDRTLDDFRRGKYQCMVASNVCA 1063 Query 577 RGIDIHGVPYVINVTLPDEK--QNYVHRIGRVGRAERMGLAISLVATEKE 624 RG++I G+ +V+N +PD+ YV+RIGR GRA G + + V E + Sbjct 1064 RGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTSTAFVDVEND 1113 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 43/73 (59%), Gaps = 2/73 (3%) Query 1 MAAFSEMGVMPE-IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 MA+F ++P+ + ++ M PT IQ S I+ G DV+ A TGSGKT AF IP Sbjct 734 MASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIP 793 Query 60 -VIQIVYETLKDQ 71 VI+++ E KD+ Sbjct 794 FVIKLMEEFEKDR 806 >sp|Q3T147|DX39B_BOVIN Spliceosome RNA helicase DDX39B OS=Bos taurus OX=9913 GN=DDX39B PE=2 SV=1 Length=428 Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|Q0J7Y8|RH45_ORYSJ DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0154200 PE=3 SV=2 Length=947 Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 90/345 (26%), Positives = 151/345 (44%), Gaps = 82/345 (24%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P LI+ P+REL Q ++IK+F K + + + I GG Q+S L+ G +IVV Sbjct 357 DGPIGLIMAPTRELVVQIHSDIKKFAKSLG---INCVAIYGGSGVAQQISELKRGAEIVV 413 Query 345 GTPGRLDDLV--STGKL-NLSQVRFLVLDEADGLLSQGYSDFINRM-HNQIPQVTSDGKR 400 TPGR+ D++ S+GK+ NL +V FLV+DEAD + G+ I R+ N P Sbjct 414 CTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPD------- 466 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 Q ++ SA + V+ L+ K++ P + + G V + +V Sbjct 467 RQTVLFSA-IFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLV--------------- 510 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 +R ++ W + KIL +F ++ CD Sbjct 511 --EVRPENERFLRLLELLGE----WFDRGKIL------------------VFVHSQDKCD 546 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +L + Q+G + C+ LHG + +R+ L FK Sbjct 547 SLLKDLFQRG---------YPCLSLHGGKDQTDRESTLADFK------------------ 579 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + V+N +P+ ++YVHR+GR G A R G A++ ++ E+E+ Sbjct 580 -SNLELVVNYDVPNHYEDYVHRVGRTGHAGRKGFAVTFISDEEER 623 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/64 (36%), Positives = 42/64 (66%), Gaps = 4/64 (6%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 G+ ++ ++++ + P IQA+++P+I+ G D + A+TGSGKT AF +P+++ V Sbjct 291 GLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHV--- 347 Query 68 LKDQ 71 KDQ Sbjct 348 -KDQ 350 >sp|A5E3W5|SUB2_LODEL ATP-dependent RNA helicase SUB2 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=SUB2 PE=3 SV=1 Length=433 Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 95/349 (27%), Positives = 155/349 (44%), Gaps = 59/349 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG---VDIVVG 345 L++ +RELA Q N +F KY+ P ++ + GG + + L+N IVV Sbjct 120 TLVICHTRELAYQIRNEYARFSKYM--PDVKTEVFYGGTPVKRDIEKLKNKDTCPHIVVA 177 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL LV + L+ V+ V+DE D +L S + R I + T K QV++ Sbjct 178 TPGRLHALVQEKAIRLNNVKSFVIDECDKVLE---SLDMRRDVQDIFRATPHQK--QVMM 232 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL S D++ + +K M P +++ +D T+H L + +I+ Sbjct 233 FSATL-SQDIRPVCKKFMQNP--LEIYVDDEAKLTLHG---------------LQQYYIK 274 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 ++ K+ R ++ + + +Q IIF ++ + L + Sbjct 275 LEE---KEKNRKLSD-------------------LLDSLEFNQVIIFVKSTQRANELNKL 312 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F + +H ER + + FK+ + R + TDV RGIDI + Sbjct 313 LC---------ACNFPSIAVHSGLPQEERIERYKSFKEFNKRICVSTDVFGRGIDIERIN 363 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 IN LP+E Y+HR+GR GR GL IS V+T++++ SR Sbjct 364 LAINYDLPNEADQYLHRVGRAGRFGTKGLGISFVSTKEDEEVLEKIQSR 412 Score = 40.4 bits (93), Expect = 0.057, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + +Q Sbjct 51 FRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQ 109 >sp|Q63413|DX39B_RAT Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3 Length=428 Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|Q9Z1N5|DX39B_MOUSE Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1 Length=428 Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DRS1 PE=3 SV=3 Length=741 Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 53/335 (16%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + + +++ P+RELA Q + K+ ++++N L L +GG+ R Q L++ D+V+ Sbjct 293 STRVIVLTPTRELAIQVGDVGKKIGQFVNN--LNFGLAVGGLNLRQQEQQLKSRPDVVIA 350 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + ++ ++ + LV+DEAD +L +G+ + + + IP+ KR Q + Sbjct 351 TPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEGFQVELTEILSLIPK----NKR-QTL 405 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+++ ++ L + + P V ++ P PKT +L + + Sbjct 406 LFSATMNT-KIQDLIQLSLQRP--------------VRIMIDP--PKT--AATKLTQEFV 446 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R + +D+ +P ++LK + + + ++F K L Sbjct 447 R---IRKRDHLKPAL--------LFQLLK------KLDPAQQSRIVVFVSRKESAHKLRI 489 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G LHG +R N+ FKK V LICTD+AARG+DI + Sbjct 490 VLGLLG---------MKVSELHGSLTQEQRLNNVNDFKKLIVPVLICTDLAARGLDIPKI 540 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 VIN +P + Y+HR+GR RA R G +IS V Sbjct 541 EIVINYDMPKSHEVYLHRVGRTARAGRDGTSISFV 575 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + + + + ++ + P+ IQ+ SIP+ L G D++ A TGSGKT A+ IP+I Sbjct 222 TTFQTLQLSRPVLKGLSQLGYTKPSPIQSASIPIALLGRDIVAGAVTGSGKTAAYMIPII 281 Query 62 Q 62 + Sbjct 282 E 282 >sp|Q9GZR7|DDX24_HUMAN ATP-dependent RNA helicase DDX24 OS=Homo sapiens OX=9606 GN=DDX24 PE=1 SV=1 Length=859 Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 95/351 (27%), Positives = 156/351 (44%), Gaps = 65/351 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q +I ++ ++ +++GG++ + Q +L +IVV TPGR Sbjct 391 LVLTPTRELAVQVKQHIDAVARFTG---IKTAILVGGMSTQKQQRMLNRRPEIVVATPGR 447 Query 350 LDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 L +L+ NL Q+R LV+DEAD ++ +G+ ++++ + + KR Q +V Sbjct 448 LWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQYNPKR-QTLVF 506 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL V + +I+H H + K D L +++G Sbjct 507 SATLTL--VHQAPARILH---------------KKHTKKMDKTAKLDLLMQKIGM----- 544 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +P + I + + E V + E K I C T L + Sbjct 545 -------RGKP---------KVIDLTRNEATVETLTETK-----IHCETDEKDFYLYYFL 583 Query 527 IQQGGGPDKKGHQFSCV---------------CLHGDRKPHERKQNLERFKKGDVRFLIC 571 +Q G + SC+ LH +R +NLE+F + + L+ Sbjct 584 MQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLA 643 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 TDVAARG+DI V +VI+ +P + YVHR GR RA GL++ L+ E Sbjct 644 TDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPE 694 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 51/93 (55%), Gaps = 8/93 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIP 59 ++A+ ++ V + +A+ + + PT IQA ++ P I D+L AAETGSGKT AF+IP Sbjct 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 250 Query 60 VIQIVYETLK-------DQQEGKKGKTTIKTGA 85 +I V + K E G+T + GA Sbjct 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEAGA 283 >sp|A2QUY7|DBP5_ASPNC ATP-dependent RNA helicase dbp5 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp5 PE=3 SV=1 Length=482 Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 91/355 (26%), Positives = 157/355 (44%), Gaps = 74/355 (21%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG-GVAARDQLSVLENGVD 341 L P+ALI+ P+RELA Q + I+ +++D L+IG V A + Sbjct 145 LQKTPQALILAPTRELARQIVGVIQVMGQFLDG------LVIGTAVPADTGARPAKMECS 198 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKR 400 +VVGTPG + D++ + +++R LVLDEAD +L QG D R+ +P + Sbjct 199 VVVGTPGTVMDMIKRRIMIANKLRVLVLDEADNMLDQQGLGDQCIRVKALLP------RD 252 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 +QV++ SAT + V + + K + L+ E+ + + + + + D+ Sbjct 253 IQVVLFSATFPAH-VHEYASKFAPQANEITLQHEELTVEGIKQLYLDCSNDEDKY----- 306 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + L Y + + +IIF +T+ Sbjct 307 -----------------------------QTLVNLYGLLTVGS-----SIIFVKTRASAQ 332 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +E+ + +G + L G + +R +++F+ G + LI T+V ARGID Sbjct 333 EIEKRMVAEG---------HTVASLTGGIEGSQRDAVIDQFRAGHAKVLITTNVLARGID 383 Query 581 IHGVPYVINVTLPD-----------EKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + V VIN +P+ + Q Y+HRIGR GR R+G++IS V+ +E Sbjct 384 VSTVSMVINYDIPEIHQPGARQRQADFQTYLHRIGRTGRFGRVGVSISFVSNREE 438 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/60 (32%), Positives = 39/60 (65%), Gaps = 2/60 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG--GGDVLMAAETGSGKTGAFSIPVI 61 F ++G+ P I Q + M++ P+ IQ ++PL+LG +++ +++G+GKT AF + ++ Sbjct 76 FEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLGNPAKNLVGQSQSGTGKTAAFVLNIL 135 >sp|Q5U216|DX39A_RAT ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1 Length=427 Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 91/337 (27%), Positives = 156/337 (46%), Gaps = 57/337 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N +VVGTP Sbjct 115 VLVMCHTRELAFQISKEYERFSKYM--PSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTP 172 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ LV + LNL V+ VLDE D +L Q + R +I ++T K Q ++ S Sbjct 173 GRILALVRSRSLNLRNVKHFVLDECDKMLEQLD---MRRDVQEIFRLTPHEK--QCMMFS 227 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL S +++ + K M P V + E + T+H L + +++ Sbjct 228 ATL-SKEIRPVCRKFMQDPMEVFVDDETKL--TLHG---------------LQQYYVKLK 269 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 D ++ N + + + +L+ +Q +IF ++ C L Q + Sbjct 270 D--SEKNRK--------LFDLLDVLE------------FNQVVIFVKSVQRCMALAQLLV 307 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +Q F + +H ER ++FK R L+ T++ RG+DI V V Sbjct 308 EQN---------FPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIV 358 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 N +P++ Y+HR+ R GR GLA++ V+ E + Sbjct 359 FNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEND 395 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 44 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 103 Query 62 Q 62 Q Sbjct 104 Q 104 >sp|Q5RE47|DX39B_PONAB Spliceosome RNA helicase DDX39B OS=Pongo abelii OX=9601 GN=DDX39B PE=2 SV=1 Length=428 Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|Q29024|DX39B_PIG Spliceosome RNA helicase DDX39B OS=Sus scrofa OX=9823 GN=DDX39B PE=3 SV=2 Length=428 Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|P60024|DX39B_PANTR Spliceosome RNA helicase DDX39B OS=Pan troglodytes OX=9598 GN=DDX39B PE=3 SV=1 Length=428 Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|Q5TM17|DX39B_MACMU Spliceosome RNA helicase DDX39B OS=Macaca mulatta OX=9544 GN=DDX39B PE=3 SV=1 Length=428 Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|Q13838|DX39B_HUMAN Spliceosome RNA helicase DDX39B OS=Homo sapiens OX=9606 GN=DDX39B PE=1 SV=1 Length=428 Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|Q5WR10|DX39B_CANLF Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3 SV=1 Length=428 Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 92/342 (27%), Positives = 152/342 (44%), Gaps = 67/342 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N IVVGTP Sbjct 116 VLVMCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTP 173 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ L LNL ++ +LDE D +L Q + R +I ++T K QV++ S Sbjct 174 GRILALARNKSLNLKHIKHFILDECDKMLEQLD---MRRDVQEIFRMTPHEK--QVMMFS 228 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWERLGKS 462 ATL S +++ + K M P + + E + T+H +V + N K +L++ L Sbjct 229 ATL-SKEIRPVCRKFMQDPMEIFVDDETKL--TLHGLQQYYVKLKDNEKNRKLFDLL--- 282 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 DV + +Q +IF ++ C L Sbjct 283 -----DVL----------------------------------EFNQVVIFVKSVQRCIAL 303 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q ++Q F + +H ER ++FK R L+ T++ RG+DI Sbjct 304 AQLLVEQN---------FPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIE 354 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 355 RVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 Q 62 Q Sbjct 105 Q 105 >sp|A3LST5|SUB2_PICST ATP-dependent RNA helicase SUB2 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=SUB2 PE=3 SV=1 Length=433 Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 96/355 (27%), Positives = 158/355 (45%), Gaps = 59/355 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR---DQLSVLENG 339 +P L++ +RELA Q N +F KY+ P ++ + GG + ++L + Sbjct 114 VPGEISTLVICHTRELAYQIRNEYARFSKYM--PDVKTEVFYGGTPIKRDIEKLKSKDTC 171 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV+ + LS V+ V+DE D +L S + R I + T K Sbjct 172 PHIVVATPGRLHALVNEKAIRLSNVKSFVIDECDKVLE---SIDMRRDVQDIFRATPHQK 228 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SATL S +++ + +K M P +++ +D T+H L Sbjct 229 --QVMMFSATL-SQEIRPVCKKFMQNP--LEIYVDDEAKLTLHG---------------L 268 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + +I+ ++ K+ R ++ + + +Q IIF ++ Sbjct 269 QQYYIKLEE---KEKNRKLSD-------------------LLDSLEFNQVIIFVKSTQRA 306 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + F + +H ER + FK+ + R + TDV RGI Sbjct 307 NELNKLLC---------SCNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRGI 357 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 DI + IN LP+E Y+HR+GR GR GLAISLV +++++ SR Sbjct 358 DIERINLAINYDLPNEADQYLHRVGRAGRFGTKGLAISLVGSKEDEEVLEKIQSR 412 Score = 40.0 bits (92), Expect = 0.064, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + +Q Sbjct 51 FRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQ 109 >sp|Q5AVM1|DBP5_EMENI ATP-dependent RNA helicase dbp5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp5 PE=3 SV=1 Length=477 Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 95/359 (26%), Positives = 149/359 (42%), Gaps = 90/359 (25%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ALI+ P+RELA Q + I+ K++D L I V A +VVGT Sbjct 144 PQALILAPTRELARQIVGVIQVMGKFLDG-----LHIGTAVPADTNARPTRMEASVVVGT 198 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 PG + D++ + ++++ +VLDEAD +L QG D R+ +P + +QV++ Sbjct 199 PGTVMDMIKKRIMVAAKLKVIVLDEADNMLDQQGLGDQCIRVKALLP------RDIQVVL 252 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT P VH P + L Sbjct 253 FSATF---------------------------PAHVHQYASKFAPAANELT--------- 276 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ---------AIIFCRTK 516 E+ E IK L + A K + Q +IIF +T+ Sbjct 277 -------------LQHEELTVEGIKQLYLDCASEEDKYRTLVQLYGLLTVGSSIIFVKTR 323 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 +E+ + +G + L G + +R Q +++F+ G + LI T+V A Sbjct 324 ASAVEIERRMVAEG---------HTVASLTGGIEGSQRDQIIDQFRAGHAKVLITTNVLA 374 Query 577 RGIDIHGVPYVINVTLPD-----------EKQNYVHRIGRVGRAERMGLAISLVATEKE 624 RGID+ V VIN +P+ + Q Y+HRIGR GR R+G++IS V+ +E Sbjct 375 RGIDVSTVSMVINYDIPELHQPPNRPRQADFQTYLHRIGRTGRFGRVGVSISFVSNREE 433 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 39/60 (65%), Gaps = 2/60 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 F ++G+ P I Q + M++ P+ IQ ++PL++G +++ +++G+GKT AF + ++ Sbjct 71 FEDLGLDPRILQGLSAMNFRKPSKIQERALPLLMGNPPKNLVGQSQSGTGKTAAFVLNIL 130 >sp|Q5RDL2|DDX24_PONAB ATP-dependent RNA helicase DDX24 OS=Pongo abelii OX=9601 GN=DDX24 PE=2 SV=1 Length=859 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 95/351 (27%), Positives = 156/351 (44%), Gaps = 65/351 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q +I ++ ++ +++GG++ + Q +L +IVV TPGR Sbjct 391 LVLTPTRELAVQVKQHIDAVARFTG---IKTAILVGGMSTQKQQRMLNRRPEIVVATPGR 447 Query 350 LDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 L +L+ NL Q+R LV+DEAD ++ +G+ ++++ + + KR Q +V Sbjct 448 LWELIKEKHYHLRNLRQLRCLVVDEADRMVEKGHFAELSQLLEMLNDSQYNPKR-QTLVF 506 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL V + +I+H H + K D L +++G Sbjct 507 SATLTL--VHQAPARILH---------------KKHTKKMDKTAKLDLLMQKIGM----- 544 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +P + I + + E V + E K I C T L + Sbjct 545 -------RGKP---------KVIDLTRNEATVETLTETK-----IHCETDEKDFYLYYFL 583 Query 527 IQQGGGPDKKGHQFSCV---------------CLHGDRKPHERKQNLERFKKGDVRFLIC 571 +Q G + SC+ LH +R +NLE+F + + L+ Sbjct 584 MQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLA 643 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 TDVAARG+DI V +VI+ +P + YVHR GR RA GL++ L+ E Sbjct 644 TDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPE 694 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/67 (39%), Positives = 42/67 (63%), Gaps = 1/67 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIP 59 ++A+ ++ V + +A+ + + PT IQ ++ P I D+L AAETGSGKT AF+IP Sbjct 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTLAPAIRDKLDILGAAETGSGKTLAFAIP 250 Query 60 VIQIVYE 66 +I V + Sbjct 251 MIHAVLQ 257 >sp|Q27268|DX39B_DROME ATP-dependent RNA helicase WM6 OS=Drosophila melanogaster OX=7227 GN=Hel25E PE=1 SV=1 Length=424 Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 99/344 (29%), Positives = 154/344 (45%), Gaps = 63/344 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DIV 343 N L++ +RELA Q ++F KY+ P ++ + GG+A + L++G IV Sbjct 109 NTCHVLVMCHTRELAFQISKEYERFSKYM--PTVKVAVFFGGMAIQKDEETLKSGTPHIV 166 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 VGTPGR+ L+ KLNL ++ VLDE D +L Q + R +I + T GK QV Sbjct 167 VGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLD---MRRDVQEIFRSTPHGK--QV 221 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP---DTVHHVVVPVNPKTDRLWERLG 460 ++ SATL S D++ + +K M P V + E + H+V + N K +L+E L Sbjct 222 MMFSATL-SKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELL- 279 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 DV + +Q +IF ++ C Sbjct 280 -------DV----------------------------------LEFNQVVIFVKSVQRCV 298 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L Q +Q F + +H ER ++FK R L+ T++ RG+D Sbjct 299 ALSQLLTEQN---------FPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMD 349 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 I V V N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 350 IERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 393 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PEI +A+ + + P+++Q E IP + G D+L A++G GKT F + + Sbjct 41 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 100 Query 62 Q 62 Q Sbjct 101 Q 101 >sp|A1DMT9|MAK5_NEOFI ATP-dependent RNA helicase mak5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=mak5 PE=3 SV=1 Length=777 Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 101/375 (27%), Positives = 163/375 (43%), Gaps = 50/375 (13%) Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 Y+ K + +A+ + + P ALI+ P+RELA Q +I + R L+ Sbjct 263 YLEKKRDDISAEKEKKSEKDSTPIALILSPTRELAHQLSKHIGELIAQAPGVNARIALLT 322 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYS 381 GG++ + Q +L +G DIV+GTPGR+ +++STG+ + Q++FLV+DEAD LLS+G+ Sbjct 323 GGLSVQKQQRLL-SGADIVIGTPGRVWEILSTGQGLIRKMQQIKFLVVDEADRLLSEGHF 381 Query 382 DFINRMHNQIPQVTSDGK-----------------RLQVIVCSATLHSFDVKKLSEKIMH 424 + + N + +V DG+ Q +V SAT H + L +K+ Sbjct 382 KEVEEILNALDRV-EDGEVPGGENQASEEESDPSSERQTLVFSATFH----RDLQQKLAG 436 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 W G D V+ D L ++L + + ++ N E Sbjct 437 KGKWT---GGD---------VMDKKESMDYLLQKLNFREEKPKFIDMNPISQMADNLKEG 484 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 E + K + + H + ++F + I +Q P + Sbjct 485 IVECGAMEKDLFLYTLLLYHPKHRTLVFTNS-ISAVRRLTKLLQTLQLP--------ALA 535 Query 545 LHGDRKPHERKQNLERFKKGD---VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 LH R +++ERF L+ TDVAARG+DI G+ VI+ P YVH Sbjct 536 LHSSMAQKARLRSVERFSSPSSDPSTILVATDVAARGLDIKGINLVIHYHAPRTADTYVH 595 Query 602 RIGRVGRAERMGLAI 616 R GR RA G ++ Sbjct 596 RSGRTARAGASGKSV 610 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/87 (37%), Positives = 49/87 (56%), Gaps = 0/87 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PEI + +M + PT +Q IP IL G DV+ A TGSGKT AF IP+ Sbjct 200 VSAWDSLGLSPEILTGLSKMKFASPTSVQEACIPQILEGHDVIGKASTGSGKTLAFGIPI 259 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASV 87 ++ E +D +K K + K + Sbjct 260 LEHYLEKKRDDISAEKEKKSEKDSTPI 286 >sp|Q40466|IF413_TOBAC Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=355 Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 83/303 (27%), Positives = 136/303 (45%), Gaps = 60/303 (20%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L++GV +VVGTP Sbjct 110 QALVLAPTRELAQQIEKVMRALGDYL---GVKVHACVGGTSVREDQRILQSGVHVVVGTP 166 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ D++ L ++ VLDEAD +LS+G+ D I + +P ++QV V S Sbjct 167 GRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PKIQVGVFS 220 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + +++ K M+ P + +K +D + + V V+ Sbjct 221 ATMPP-EALEITRKFMNQPVRILVKRDDVTLEGIKQFYVNVD------------------ 261 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 E W ++ L Y AI Q++IF T+ D L Sbjct 262 --------------KEEWK--LETLCDLYETLAIT-----QSVIFVNTRRKVDWL----- 295 Query 528 QQGGGPDK-KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 DK + + HGD + R + F+ G R LI TD+ ARGID+ V Sbjct 296 -----TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 350 Query 587 VIN 589 VIN Sbjct 351 VIN 353 Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 >sp|A6ZXP4|SUB2_YEAS7 ATP-dependent RNA helicase SUB2 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=SUB2 PE=3 SV=1 Length=446 Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 91/346 (26%), Positives = 156/346 (45%), Gaps = 59/346 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN---G 339 +P +++ +RELA Q N +F KY+ P ++ + GG +L+N Sbjct 127 VPGEVAVVVICNARELAYQIRNEYLRFSKYM--PDVKTAVFYGGTPISKDAELLKNKDTA 184 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV ++LS V+ V+DE D +L + + R +I + T K Sbjct 185 PHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELD---MRRDVQEIFRATPRDK 241 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SATL S +++ + + + P +++ +D T+H L Sbjct 242 --QVMMFSATL-SQEIRPICRRFLQNP--LEIFVDDEAKLTLHG---------------L 281 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + +I+ ++ ++ R A + + + + +Q IIF ++ Sbjct 282 QQYYIKLEE---REKNRKLA-------------------QLLDDLEFNQVIIFVKSTTRA 319 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + F + +HG K ER + FK + R + TDV RGI Sbjct 320 NELTKLL---------NASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGI 370 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 DI + IN L +E Y+HR+GR GR GLAIS V++++++ Sbjct 371 DIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDE 416 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + +Q Sbjct 64 FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQ 122 >sp|Q9H8H2|DDX31_HUMAN Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens OX=9606 GN=DDX31 PE=1 SV=2 Length=851 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 94/364 (26%), Positives = 169/364 (46%), Gaps = 49/364 (13%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P AL++ P+RELA Q+ + +++ K + +++GG + + + L G++I++ Sbjct 304 DGPYALVLVPTRELALQSFDTVQKLLKPFT--WIVPGVLMGGEKRKSEKARLRKGINILI 361 Query 345 GTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 TPGRL D + ST ++ S++R+LV DEAD +L G+ I + N V ++ ++ Q Sbjct 362 STPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILN---AVNAECQKRQN 418 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SATL + V +L++ +H P + SV D H +NPK + E Sbjct 419 VLLSATL-TEGVTRLADISLHDPVSI------SVLDKSHDQ---LNPKDKAVQEVCPPPA 468 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGE--------YAVRAIKEHKMDQAIIFCRT 515 D A PE + + ++ + + ++ K + + ++F + Sbjct 469 GDKLDSFA---------IPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSS 519 Query 516 KIDCDNLE-------QYFIQQGGGP-----DKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 C+ +E Q + G P + + LHG + ER + F Sbjct 520 ---CELVEFHYSLFLQTLLSSSGAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSH 576 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA-TE 622 L+CTDVAARG+D+ V +++ P Y+HRIGR R G ++ ++A +E Sbjct 577 SRRGVLLCTDVAARGLDLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLILAPSE 636 Query 623 KEKV 626 E V Sbjct 637 AEYV 640 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 42/64 (66%), Gaps = 5/64 (8%) Query 2 AAFSEMGVMPEIAQAVE---EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 AAF E+G+ P + + +M + T +Q +SIP++L G D L+ ++TGSGKT A+ I Sbjct 230 AAFHELGLHPHLISTINTVLKMSSM--TSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCI 287 Query 59 PVIQ 62 PV+Q Sbjct 288 PVVQ 291 >sp|Q07478|SUB2_YEAST ATP-dependent RNA helicase SUB2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SUB2 PE=1 SV=1 Length=446 Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 91/346 (26%), Positives = 156/346 (45%), Gaps = 59/346 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN---G 339 +P +++ +RELA Q N +F KY+ P ++ + GG +L+N Sbjct 127 VPGEVAVVVICNARELAYQIRNEYLRFSKYM--PDVKTAVFYGGTPISKDAELLKNKDTA 184 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV ++LS V+ V+DE D +L + + R +I + T K Sbjct 185 PHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELD---MRRDVQEIFRATPRDK 241 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SATL S +++ + + + P +++ +D T+H L Sbjct 242 --QVMMFSATL-SQEIRPICRRFLQNP--LEIFVDDEAKLTLHG---------------L 281 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + +I+ ++ ++ R A + + + + +Q IIF ++ Sbjct 282 QQYYIKLEE---REKNRKLA-------------------QLLDDLEFNQVIIFVKSTTRA 319 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + F + +HG K ER + FK + R + TDV RGI Sbjct 320 NELTKLL---------NASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGI 370 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 DI + IN L +E Y+HR+GR GR GLAIS V++++++ Sbjct 371 DIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDE 416 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + +Q Sbjct 64 FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQ 122 >sp|O00148|DX39A_HUMAN ATP-dependent RNA helicase DDX39A OS=Homo sapiens OX=9606 GN=DDX39A PE=1 SV=2 Length=427 Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 92/337 (27%), Positives = 154/337 (46%), Gaps = 57/337 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTP 347 L++ +RELA Q ++F KY+ P ++ + GG++ + VL+ N +VVGTP Sbjct 115 VLVMCHTRELAFQISKEYERFSKYM--PSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTP 172 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ LV +L V+ VLDE D +L Q + R +I ++T K Q ++ S Sbjct 173 GRILALVRNRSFSLKNVKHFVLDECDKMLEQLD---MRRDVQEIFRLTPHEK--QCMMFS 227 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL S D++ + K M P V + E + T+H L + +++ Sbjct 228 ATL-SKDIRPVCRKFMQDPMEVFVDDETKL--TLHG---------------LQQYYVKLK 269 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 D ++ N + + + +L+ +Q IIF ++ C L Q + Sbjct 270 D--SEKNRK--------LFDLLDVLE------------FNQVIIFVKSVQRCMALAQLLV 307 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +Q F + +H ER ++FK R L+ T++ RG+DI V V Sbjct 308 EQN---------FPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIV 358 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 N +P++ Y+HR+ R GR GLAI+ V+ E + Sbjct 359 FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 395 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/61 (33%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 44 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 103 Query 62 Q 62 Q Sbjct 104 Q 104 >sp|Q5A9Z6|FAL1_CANAL ATP-dependent RNA helicase FAL1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=FAL1 PE=3 SV=1 Length=399 Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 58/138 (42%), Positives = 78/138 (57%), Gaps = 14/138 (10%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 QA+IFC TK+ + L K F+ V +HGD K ER + F++G+ R Sbjct 267 QAVIFCNTKLKVNWL---------ADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSR 317 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 LI TDV ARGID+ V VIN LP +K+NY+HRIGR GR R G AI+L+ K+ V Sbjct 318 VLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLIT--KDDV- 374 Query 628 YHVCSSRGKGCYNTRLKE 645 V + Y+T++KE Sbjct 375 --VTLKEFEKYYSTKIKE 390 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 3/105 (3%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q N +K Y++ + IGG + + L+ G IV GTP Sbjct 96 QALILSPTRELAIQIQNVVKHLGDYMN---IHTHACIGGKNVGEDVKKLQQGQQIVSGTP 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 GR+ D++ L ++ L+LDEAD L ++G+ + I ++ +P Sbjct 153 GRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLP 197 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + P++ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI +++ Sbjct 27 TFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLE 86 Query 63 IV 64 ++ Sbjct 87 VI 88 >sp|Q6FL17|SUB2_CANGA ATP-dependent RNA helicase SUB2 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=SUB2 PE=3 SV=1 Length=439 Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 92/346 (27%), Positives = 155/346 (45%), Gaps = 59/346 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN---G 339 +P +++ +RELA Q N +F KY+ P +R + GG +L+N Sbjct 120 VPGEVSVVVICNARELAYQIRNEYLRFSKYM--PDVRTAVFYGGTPIAKDAELLKNKDTA 177 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV ++LS V+ V+DE D +L + + R +I + T K Sbjct 178 PHIVVATPGRLKALVRDKMIDLSHVKNFVIDECDKVLEELD---MRRDVQEIFRATPRDK 234 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SATL S +++ + + + P +++ +D T+H L Sbjct 235 --QVMMFSATL-SQEIRPICRRFLQNP--LEIFVDDEAKLTLHG---------------L 274 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + +I+ ++ ++ R A + + + + +Q IIF ++ Sbjct 275 QQYYIKLEE---REKNRKLA-------------------QLLDDLEFNQVIIFVKSTSRA 312 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + F + +HG K ER + FK + R + TDV RGI Sbjct 313 NELTKLL---------NASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGI 363 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 DI + IN L +E Y+HR+GR GR GLAIS V+ ++++ Sbjct 364 DIERINLAINYDLLNEADQYLHRVGRAGRFGTKGLAISFVSNKEDE 409 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + +Q Sbjct 57 FKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQ 115 >sp|Q84T03|RH27_ORYSJ DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0802700 PE=3 SV=1 Length=590 Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 93/337 (28%), Positives = 156/337 (46%), Gaps = 62/337 (18%) Query 282 FLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 F+P N ++V P+RELA QT N K+ KY IIGG R + L GV Sbjct 163 FMPRNGTGVVVVCPTRELAIQTHNVAKELMKYHSQTLG---YIIGGNGRRGEADQLAKGV 219 Query 341 DIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +++V TPGRL D L +T +++ L++DEAD LL Q + + + ++ ++P Sbjct 220 NLLVATPGRLLDHLQNTKGFIYRRLKCLIIDEADRLLEQNFEEDMKQIFKRLPL------ 273 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q ++ SAT +E++ F K E+S V+ V + +T+ E L Sbjct 274 NRQTVLFSATQ--------TEQVKEFAKLSFEKNEESTSKPVY--VGVDDAETNATVEGL 323 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + + D + +L YA K++K + ++F + C Sbjct 324 QQGYCVIDS-----------------ARRFLVL---YAFLKKKQNK--KVMVFFSS---C 358 Query 520 DNLEQY-----FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 ++++ + F+Q C +HG +K +R F K + L+CT+V Sbjct 359 NSVKFHAELLNFLQ-----------IECSDIHGKQKQQKRTTTFFNFCKAEKGILLCTNV 407 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 AARG+DI V +++ PDE ++Y+HR+GR R E+ Sbjct 408 AARGLDIPDVDFIVQYDPPDEPKDYIHRVGRTARGEK 444 Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 33/62 (53%), Positives = 45/62 (73%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+GV A+A+ EM++ T IQA SIP +L G DV+ AA+TGSGKT AF IP I++ Sbjct 98 FSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEM 157 Query 64 VY 65 ++ Sbjct 158 LH 159 >sp|Q6CKI1|PRP5_KLULA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=PRP5 PE=3 SV=1 Length=812 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 86/345 (25%), Positives = 154/345 (45%), Gaps = 55/345 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+RELA Q +F K + + +GG + Q++ L+ GVDI+V T Sbjct 321 PIGLILTPTRELAVQIQEEALKFCK---GSGISSICCVGGSELKQQINELKRGVDIIVAT 377 Query 347 PGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR DL++ L+ +++ F+V+DEAD L G+ +N++ I Q Sbjct 378 PGRFIDLMTLNSGHLLSPTRISFVVMDEADRLFDLGFGPQVNQIMGCIRPDK------QC 431 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT S +K + + + P + + + + + + V + + H Sbjct 432 VLFSATFPS-KLKHFASRTLKNPIQITINSKSLINENIQQRV-----------QIFDEEH 479 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 ++ + + + S+ + + +GE ++ IIF ++ CD L Sbjct 480 VKFEFLLKR------------LSDRLALHRGED----------EKTIIFVGSQQLCDLLY 517 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G + +H + ER +NL++FK+ D LICT+V +RG+++ Sbjct 518 DELLLNG---------ITTFPIHAGKPSAERLRNLQKFKETDNGILICTEVLSRGLNVPE 568 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 V VI YVH +GR GR G+A+S V ++ Y Sbjct 569 VSLVIIYNAAKTIAQYVHTVGRTGRGTNNGVALSFVMVDELASAY 613 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/63 (37%), Positives = 42/63 (67%), Gaps = 1/63 (2%) Query 1 MAAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ EI + E+ ++ T IQ ++IP I+ G DV+ ++TGSGKT AF +P Sbjct 244 VTKWSQLGLSSEIMDLISNELQFVTLTPIQCQAIPAIMSGRDVIGISKTGSGKTVAFLLP 303 Query 60 VIQ 62 +++ Sbjct 304 LVR 306 >sp|O01836|GLH3_CAEEL ATP-dependent RNA helicase glh-3 OS=Caenorhabditis elegans OX=6239 GN=glh-3 PE=1 SV=1 Length=720 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 91/338 (27%), Positives = 149/338 (44%), Gaps = 49/338 (14%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+ +I+ P+RELA+Q N ++F Y +++ + GG+ S + G I+VGT Sbjct 376 PRCIILTPTRELADQIYNEGRKFS-YQSVMEIKP--VYGGINVGYNKSQIMKGCTIIVGT 432 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 GR+ G + L + R+LVLDEAD ++ S G+ I ++ N +D + Q ++ Sbjct 433 IGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKR--QTMM 490 Query 406 CSATLHSFDVKKLSEKIM---HFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 SAT S V++ + K++ + +D G + + K D+L + LG Sbjct 491 FSATFPS-SVQEAARKLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLG-- 547 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 I D + N+ + + + I+F + D L Sbjct 548 -IDIDTYTTEKNS---------------------------DVFVKKTIVFVAQQKMADTL 579 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Q + +HG R+ ER L+ F+ G LI T V RG+DI Sbjct 580 ASIM---------SAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIK 630 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 GV +VIN +P+ +Y+HRIGR GR G A S ++ Sbjct 631 GVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFIS 668 Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI- 61 +FS+ + + + VE + T IQ ++PL+ G D+L A+TGSGKT AF +P++ Sbjct 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358 Query 62 QIVYETLKDQQEGKKG 77 +++ E KD G +G Sbjct 359 RLILE--KDLNYGAEG 372 >sp|A7TEG8|MAK5_VANPO ATP-dependent RNA helicase MAK5 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=MAK5 PE=3 SV=1 Length=763 Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 102/403 (25%), Positives = 175/403 (43%), Gaps = 49/403 (12%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL-IIGGVAARDQLSVL--ENGVDI 342 AP LI P+RELA+Q +++++ I + +L + GG++ + Q +L E I Sbjct 262 APIGLIFTPTRELAKQVTDHLRKIASLIVDKSPHAILSLTGGLSIQKQERLLKYEGSGRI 321 Query 343 VVGTPGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 VV TPGR +L+ K SQ+ LVLDEAD LL G+ D + + + + + K Sbjct 322 VVATPGRFLELIEKDKTLVERFSQISTLVLDEADRLLQDGHFDEFENILKYLGRESKNRK 381 Query 400 -RLQVIVCSATLHSFDVKKLSE---KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 Q ++ SAT + KLS K M P+ K E+ + + H++ ++ K+ + Sbjct 382 HNWQTMIFSATFATDLFDKLSHASWKNMKTPS----KNENEMEIVLKHLMTKIHFKSKPI 437 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + A + + E E + + + + + +IFC Sbjct 438 L------------IDANPEDKVSSQIKESLIECAATERDLFCYYFVSMYP-GKTLIFCNA 484 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK--------GDVR 567 L Y SC +H R +NLER+++ G Sbjct 485 IDSVKKLTAYL---------NNLNISCFQIHSSMTQKNRLRNLERYQQQSEKNKILGKPT 535 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK---- 623 L+ +DVAARG+DI G+ +VI+ LP Y+HR GR RA G+++ + + E+ Sbjct 536 VLVGSDVAARGLDIPGIQHVIHYHLPRTADVYIHRSGRTARANNEGVSVMICSPEEAMGP 595 Query 624 -EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 K+ + + GK + K T+ + +LS+++E Sbjct 596 LRKLRKTLANKSGKDIIMGKKKWQKTVTMLPIDDTILSQLKER 638 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 28/38 (74%), Gaps = 0/38 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 PT IQ E+IP+ L G D++ A TGSGKT A+ IP+I+ Sbjct 215 PTLIQEEAIPMALKGEDIMGKASTGSGKTLAYGIPIIE 252 >sp|Q6DRI7|DDX51_DANRE ATP-dependent RNA helicase DDX51 OS=Danio rerio OX=7955 GN=ddx51 PE=2 SV=1 Length=652 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 97/361 (27%), Positives = 161/361 (45%), Gaps = 36/361 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG---VAARDQLSVLENGV---- 340 +AL V P++ELA+Q N F Y + L+ ++I G A + LS + GV Sbjct 274 RALAVLPTKELAQQVSNV---FSAYTEGSSLKVVMITGQKSFAAEQTALSEIRGGVSHSM 330 Query 341 -DIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI---PQVT 395 DIVV TPGRL D ++ +L +RFL++DEAD ++ + +++++ + P T Sbjct 331 ADIVVATPGRLVDHINKNSSFSLQHLRFLIIDEADRMIDSMHQSWLSQVTKAVYSTPGET 390 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + + T S ++ + + F + E +H RL Sbjct 391 HTSVFRRTVPGPITAASLSPPQIPLQKLLFSATLTQNPEKLQLLDLHQ---------PRL 441 Query 456 WERLGKSHIRTDD-VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 + +H TD+ ++D E + K + + K A+ F Sbjct 442 F---SSTHSLTDNPAQSQDTFHFPQGLSEYYVPCTFSKKPLIILHFLLRLKFSPALCFTN 498 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 ++ L ++ GG + +FS G+R ++ L+ F+KG + LI TD Sbjct 499 SREGAHRL-YLLVKLFGGVEVA--EFSSKLSPGER-----QKTLKDFEKGKIPLLISTDA 550 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARGIDI+GV VIN P + Y+HR+GR RA + GLA + + +EK + + S Sbjct 551 AARGIDINGVKCVINYDAPQYIRTYIHRVGRTARAGKAGLAFTFLLKVQEKRFLKMVSDA 610 Query 635 G 635 G Sbjct 611 G 611 Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 48/112 (43%), Gaps = 20/112 (18%) Query 28 IQAESIPLIL---GGG-----------DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQE 73 +QAE IP IL G G DV ++A TGSGKT AF IPV+Q + + + Q Sbjct 215 VQAEVIPAILESVGSGLLVGPGGYRPRDVCVSAPTGSGKTLAFVIPVVQALSKRVVRQVR 274 Query 74 GKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----GSDGLCCQSREVKEWHG 121 T + V N + + Y GS+ + G + + E G Sbjct 275 ALAVLPTKELAQQVSNVF--SAYTEGSSLKVVMITGQKSFAAEQTALSEIRG 324 >sp|Q6FQZ0|DBP8_CANGA ATP-dependent RNA helicase DBP8 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP8 PE=3 SV=1 Length=437 Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 91/348 (26%), Positives = 144/348 (41%), Gaps = 69/348 (20%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P +++ P+RELA Q Y++ +R L++GG + DQ L+ + Sbjct 75 PTGMFGIVLTPTRELAMQIAEQFTALGSYMN---IRVALVVGGESIVDQALQLQRKPHFI 131 Query 344 VGTPGRL--------DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 + TPGRL DD V L +V++LVLDEAD LL++ +S+ + +P Sbjct 132 IATPGRLAHHILNSGDDTVG----GLKRVKYLVLDEADILLTETFSNDLKTCVGALP--- 184 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV----PDTVHHVVVPVNPK 451 ++ Q ++ +AT+ V+ L + + KG+ + + V +V +P Sbjct 185 -PKEKRQTLLFTATITD-QVRALQDAPVQ-------KGKQPLFCYEVENVDNVAIPSTLN 235 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 T+ + PE EA Y + + + AII Sbjct 236 TEYVL------------------------VPEHVKEAYL-----YQLLTCESYANSTAII 266 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F + L + K LH ER ++ RF+ R LI Sbjct 267 FVNRTTAAEVLRRTL---------KALDVRVASLHSQMPQQERTNSMHRFRANAARVLIA 317 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 TDVA+RG+DI V VIN +P + ++HR GR RA R G AIS + Sbjct 318 TDVASRGLDIPTVELVINYDIPSDPDTFIHRSGRTARAGRKGDAISFI 365 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++G+ + ++++ M PT IQ+ IP IL G D + A+TGSGKT AF+ P++ Sbjct 11 FRQLGLSKWLVESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKTIAFAGPML 68 >sp|Q6BTL5|DRS1_DEBHA ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DRS1 PE=3 SV=1 Length=771 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 96/393 (24%), Positives = 183/393 (47%), Gaps = 56/393 (14%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 ++ + +++ P+RELA Q + K+ ++++N L L +GG+ R Q L+ DIV+ Sbjct 328 SSTRVIVLAPTRELAIQVCDVGKKIGQFVNN--LNFGLAVGGLNLRQQEQQLKTRPDIVI 385 Query 345 GTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 TPGRL D + ++ ++ + LV+DEAD +L +G+ + + + IP+ + Q Sbjct 386 ATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEGFQAELTEILSLIPR-----HKRQT 440 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT+++ ++ L + + P V ++ P PK+ + +L + Sbjct 441 LLYSATMNT-KIQDLIQLSLQKPVRV--------------MIDP--PKSAAI--KLVQEF 481 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +R + +D+ +P + + IK ++ + ++ ++F K L Sbjct 482 VR---IRKRDHLKPA-----LLFQLIK---------SVDPSQQNRIVVFVARKESAHKLR 524 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 G LHG +R ++ FK V LICTD+AARG+DI Sbjct 525 IILGLLG---------MRVSELHGSLTQEQRLASVNDFKNLTVPVLICTDLAARGLDIPK 575 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV---ATEKEKVWYHVCSSRGKGCYN 640 + VIN +P + Y+HR+GR RA R G +I+ V ++ V + S + N Sbjct 576 IEIVINYDMPKTHEIYLHRVGRTARAGREGKSITFVGESTQDRAIVKDAIKSISEEQARN 635 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 ++ + + + E++ L++I E I +V Sbjct 636 SKQGKAVSRNVDWKEVEELNKIVESKATVIEEV 668 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/69 (32%), Positives = 41/69 (59%), Gaps = 1/69 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + + + + ++ + P+ IQ+ IP+ L G D++ A TGSGKT A+ IP+I Sbjct 258 TTFQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPII 317 Query 62 Q-IVYETLK 69 + ++Y+ K Sbjct 318 ERLLYKPAK 326 >sp|Q4P5U4|DBP4_USTMA ATP-dependent RNA helicase DBP4 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP4 PE=3 SV=2 Length=916 Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 96/378 (25%), Positives = 163/378 (43%), Gaps = 67/378 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q +++ Y L+IGG + + L ++I++ TPG Sbjct 133 ALVISPTRELAIQIFEVLRKIGSY---HTFSAGLVIGGKDVKQEKDRLSR-INILIATPG 188 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL + T + S V+ LVLDEAD +L G+S +N + +P + Q ++ S Sbjct 189 RLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTLNAIVENLP------RNRQTMLFS 242 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLK---GEDSVPDTV--HHVVVPVNPKTDRLWERLGKS 462 AT + VK L+ + P +V ++ E P + H+++V + K D L+ S Sbjct 243 AT-QTKRVKDLARLSLQDPEYVAVREPENEGCTPRGLEQHYMLVELEKKLDLLF-----S 296 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 IRT H +A++F + + Sbjct 297 FIRT-------------------------------------HTKCKALVFMSSCRQVQFV 319 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + F + G S + LHG +K +R Q +F K L TD+AARG+D Sbjct 320 HETFCKLRPG-------VSLMALHGKQKQAKRLQIFTQFTKTQHALLFATDIAARGLDFP 372 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V +VI + +P++ Y+HR+GR R G ++ V +EK +++ + Sbjct 373 AVDWVIQLDVPEDVDTYIHRVGRTARYTAKGNSLLFVLPSEEKGILEALATKNIAIGRIK 432 Query 643 LKEDGGCTIWYNEMQLLS 660 KE +I N++Q + Sbjct 433 PKESKTQSIQ-NQLQAFA 449 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + + ++ + TDIQA+S+ L L G DVL AA TGSGKT AF IPV++I Sbjct 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEI 119 Query 64 VY 65 +Y Sbjct 120 LY 121 >sp|Q54ZI9|DDX20_DICDI Probable ATP-dependent RNA helicase ddx20 OS=Dictyostelium discoideum OX=44689 GN=ddx20 PE=3 SV=2 Length=849 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 88/351 (25%), Positives = 153/351 (44%), Gaps = 58/351 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE--------- 337 P LI+ P+RE+A Q + IK KY K + IGG+ + + Sbjct 162 PLVLIIAPTREIAVQIKDVIKSISKYCKRIKCE--VFIGGLNSNNNKDENNNNILNNEDV 219 Query 338 ---NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 NG I+VGTPG++ L+ L ++ +++DEAD LL +S IN +++ I Sbjct 220 NRLNGTQIIVGTPGKIKSLIENLHLRTDTLKMVIMDEADKLLDASFSKTINWIYSAIGNG 279 Query 395 TSDGKR------LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 S+ +Q++ SAT S+ + L + M+ V+++ P Sbjct 280 NSNKNNSSSGSGIQMLAFSATYPSYLIN-LLKLYMNNENLVEIRLCSDTPS--------- 329 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 E + + + + ++N + N K + V +++ Q Sbjct 330 -------LEGIKQYYQIFRNDFTENNYKTFQN------------KCKSLVLVLEQVSFYQ 370 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AIIFC KI + L + ++G + + G + +R + K ++R Sbjct 371 AIIFCNHKIRGEELTRQLNREG---------WPTAFIAGGQNQKDRLSTMSALKSFNIRI 421 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 L+ TD+ +RGID+ V VIN+ LP + + Y HRIGR GR G++I+ + Sbjct 422 LVSTDLISRGIDVERVNLVINLDLPKDHETYFHRIGRTGRFGTYGVSITFI 472 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 3/89 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FSE+ + E+ + +E+ + P+ IQ ++IPL + G D++ A++G+GKT F + ++ Sbjct 56 TFSELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGTGKTIVFGVIALE 115 Query 63 IVY---ETLKDQQEGKKGKTTIKTGASVL 88 V + L+ +QE K + T +T +L Sbjct 116 CVLRESKLLRQKQELNKTQLTNQTNKQLL 144 >sp|Q6BPT8|DBP6_DEBHA ATP-dependent RNA helicase DBP6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP6 PE=3 SV=2 Length=576 Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 88/359 (25%), Positives = 161/359 (45%), Gaps = 60/359 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV------- 340 +A+I+ P++ L Q + Q K + + V+ ++ LS+ E G+ Sbjct 212 RAIILVPTKPLINQVKTTLNQLSKGTN---------LSIVSLKNDLSIKEEGIKLQTNEP 262 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 DI+V TPGRL D ++ G ++L +++LV+DEAD LL+Q + ++ + ++I + T+ +R Sbjct 263 DIIVSTPGRLVDHLTNGYISLKNLQYLVIDEADRLLNQSFQNWCQILISKIDEFTNIKER 322 Query 401 ---------LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 +Q ++ SATL + D KLS H P + + ++ + + + + +N Sbjct 323 NISNSWKLNVQKMIFSATLTT-DAGKLSLLKFHKPRLIIVNNKEQLVNEMFSLPATLN-- 379 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + AK + +P S + S ++K+ +I Sbjct 380 -----------EFKLQFGSAKSSLKPLILSKFLLS----------------KNKLANVLI 412 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL--HGDRKPHERKQNLERFKKGDVRFL 569 F ++ D + +K G + + + R + L+ F K + L Sbjct 413 FTKSN---DASLRLSRLLSLIMNKLGSETINIAYINSTNNTTSVRSKILKDFSKQTINIL 469 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 + TD+ ARGIDI + VIN LP+ + YVHR+GR RA + G A + + E W+ Sbjct 470 VATDLIARGIDILSITDVINYDLPNSSREYVHRVGRTARANQEGFAYNFCFGKGEAKWF 528 Score = 36.6 bits (83), Expect = 0.93, Method: Compositional matrix adjust. Identities = 15/23 (65%), Positives = 20/23 (87%), Gaps = 0/23 (0%) Query 40 GDVLMAAETGSGKTGAFSIPVIQ 62 GD+L+ A TGSGKT A+SIP+I+ Sbjct 179 GDLLVNASTGSGKTLAYSIPIIE 201 >sp|Q0UCB9|DBP5_PHANO ATP-dependent RNA helicase DBP5 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP5 PE=3 SV=1 Length=471 Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 89/345 (26%), Positives = 151/345 (44%), Gaps = 73/345 (21%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+A+ + PSRELA Q L I ++++ L+ + I R+Q ++V Sbjct 133 NEPQAIALAPSRELARQILGVITHMGQFMEG--LKTMAAIPDPTKRNQ----RLDAHVLV 186 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQV 403 GTPG + + + + ++ LVLDEAD +L QG D R+ + +P K +Q Sbjct 187 GTPGTVQEQLKRRLIKSDSIKILVLDEADNMLDQQGMGDQCTRVKSLLP------KNIQT 240 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT V + K + L E+ + + + + ++ D+ Sbjct 241 VLFSATFPPA-VINYANKFAPNSNVLTLAHEELTIEGIKQLYIDIDKDQDK--------- 290 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA--IIFCRTKIDCDN 521 +S +K Y + M QA IIF RT+ + Sbjct 291 ---------------------YSTLLKF----YGL-------MTQASSIIFVRTRRTAEE 318 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 LE+ + +G L G + +R + +++F+ G+ + LI T+V ARGID+ Sbjct 319 LERRMVAEG---------HKVAQLSGALEGQDRDRVIDQFRSGEAKVLITTNVLARGIDV 369 Query 582 HGVPYVINVTLPD-------EKQNYVHRIGRVGRAERMGLAISLV 619 V VIN +P + + Y+HRIGR GR R+G+A++ V Sbjct 370 ESVTMVINYDVPTMADGREADPETYLHRIGRTGRFGRVGVALTFV 414 Score = 35.0 bits (79), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/49 (31%), Positives = 33/49 (67%), Gaps = 2/49 (4%) Query 15 QAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 + V M++ P+ IQ +++PL+L +++ +++G+GKT AFS+ ++ Sbjct 77 KGVRNMNFRKPSKIQEKALPLLLMNPPTNMIAQSQSGTGKTAAFSLNIL 125 >sp|Q5ZLN8|DDX55_CHICK ATP-dependent RNA helicase DDX55 OS=Gallus gallus OX=9031 GN=DDX55 PE=2 SV=1 Length=591 Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 97/343 (28%), Positives = 154/343 (45%), Gaps = 57/343 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-ENGVDIVVGTP 347 A+I+ P+RELA Q + F K+ PK ++L+IGG + + E+G +I+V TP Sbjct 85 AIIITPTRELAIQIDEVLTHFTKHF--PKFSQILLIGGRNPMEDVEKFKEHGGNIIVATP 142 Query 348 GRLDDLVSTGK--LNLSQ----VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 GRL+DL L+L+ + LVLDEAD LL G+ +N + +P+ G Sbjct 143 GRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFLPKQRRTG--- 199 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT + +V+ L + P + +K E V T T + RL Sbjct 200 ---LFSAT-QTQEVENLVRAGLRNPVRISVK-EKGVAAT----------NTQKTPTRL-- 242 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 +N + E +++ + L+ +HK ++ ++F T C Sbjct 243 -----------ENYYMICKADEKFNQLVHFLR---------QHKQEKHLVFFST---CAC 279 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 +E Y G + Q +C+HG K H+R + F++ L+CTDV ARGIDI Sbjct 280 VEYY----GKALESLIKQVKIMCIHGKMK-HKRNKIFTEFRRLAGGILVCTDVMARGIDI 334 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V +V+ P +VHR GR R G A+ + +E Sbjct 335 PEVHWVLQYDPPSSASAFVHRCGRTARIGNAGSALVFLLPMEE 377 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 26/71 (37%), Positives = 43/71 (61%), Gaps = 3/71 (4%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY- 65 + + P + +A++++ + T +Q+ +IPL + DV A TGSGKT AF IP+++I+ Sbjct 14 VALSPGVLRALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPILEILLR 73 Query 66 --ETLKDQQEG 74 E LK Q G Sbjct 74 REEKLKKMQVG 84 >sp|P38719|DBP8_YEAST ATP-dependent RNA helicase DBP8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP8 PE=1 SV=1 Length=431 Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 92/348 (26%), Positives = 150/348 (43%), Gaps = 69/348 (20%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+ +++ P+RELA Q +QF + +R +I+GG + Q L+ + Sbjct 68 PSGMFGVVLTPTRELAMQI---AEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHFI 124 Query 344 VGTPGRL-DDLVSTGKLN---LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 + TPGRL ++S+G L + ++LVLDEAD LL+ ++D + + +P K Sbjct 125 IATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALP---PKDK 181 Query 400 RLQVIVCSATLHSFDVKKLSEKIMH------FPTWVDLKGEDSVPDT--VHHVVVPVNPK 451 R Q ++ +AT+ VK L + F V+ ++P T + +++VP + K Sbjct 182 R-QTLLFTATITD-QVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILVPEHVK 239 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 L++ L +E++ AII Sbjct 240 EAYLYQLL----------------------------------------TCEEYENKTAII 259 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F + + L + K + LH ER +L RF+ R LI Sbjct 260 FVNRTMTAEILRRTL---------KQLEVRVASLHSQMPQQERTNSLHRFRANAARILIA 310 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 TDVA+RG+DI V V+N +P + ++HR GR RA R+G AIS V Sbjct 311 TDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISFV 358 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MA F +G+ + +++ M PT IQ IP IL G D + A+TGSGKT AF+ P+ Sbjct 1 MADFKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPM 60 Query 61 I 61 + Sbjct 61 L 61 >sp|A6ZT77|DBP8_YEAS7 ATP-dependent RNA helicase DBP8 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP8 PE=3 SV=1 Length=431 Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 92/348 (26%), Positives = 150/348 (43%), Gaps = 69/348 (20%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+ +++ P+RELA Q +QF + +R +I+GG + Q L+ + Sbjct 68 PSGMFGVVLTPTRELAMQI---AEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHFI 124 Query 344 VGTPGRL-DDLVSTGKLN---LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 + TPGRL ++S+G L + ++LVLDEAD LL+ ++D + + +P K Sbjct 125 IATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALP---PKDK 181 Query 400 RLQVIVCSATLHSFDVKKLSEKIMH------FPTWVDLKGEDSVPDT--VHHVVVPVNPK 451 R Q ++ +AT+ VK L + F V+ ++P T + +++VP + K Sbjct 182 R-QTLLFTATITD-QVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILVPEHVK 239 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 L++ L +E++ AII Sbjct 240 EAYLYQLL----------------------------------------TCEEYENKTAII 259 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F + + L + K + LH ER +L RF+ R LI Sbjct 260 FVNRTMTAEILRRTL---------KQLEVRVASLHSQMPQQERTNSLHRFRANAARILIA 310 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 TDVA+RG+DI V V+N +P + ++HR GR RA R+G AIS V Sbjct 311 TDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISFV 358 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 36/61 (59%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MA F +G+ + +++ M PT IQ IP IL G D + A+TGSGKT AF+ P+ Sbjct 1 MADFKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPM 60 Query 61 I 61 + Sbjct 61 L 61 >sp|Q5BCI0|MAK5_EMENI ATP-dependent RNA helicase mak5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=mak5 PE=3 SV=1 Length=770 Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 97/363 (27%), Positives = 154/363 (42%), Gaps = 56/363 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+RELA Q +I R L+ GG++ + Q +LE DIV+GT Sbjct 278 PIALILSPTRELAHQLQKHIYGLISNAPGVNARTALLTGGLSVQKQQRLLETA-DIVIGT 336 Query 347 PGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK---- 399 PGR+ +++ TG+ + ++FLV+DEAD LLS+G+ + + + + +V G Sbjct 337 PGRVWEVLRTGQGLIRRMQGIKFLVIDEADRLLSEGHFKEVEDILSSLDRVEDGGPPDEE 396 Query 400 ------------RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 Q +V SAT H + L +K+ W G D Sbjct 397 DDSSEENVVPGVERQTLVFSATFH----RDLQQKLAGKGKWT---GGD------------ 437 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI----KILKGEYAVRAIKE 503 + K + + L K + R + D P + E E I + K Y + Sbjct 438 IMNKKESMEYLLQKLNFREEKPKFID-VNPVSQMAEGLKEGIVECPAMEKDLYLYTLLLY 496 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 H + ++F + + Q + Q + LH R +++ERF Sbjct 497 HPKHRTLVFTNSISAVRRITQLL---------QTLQLPALALHSSMAQKARLRSVERFSS 547 Query 564 GDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 L+ TDVAARG+DI G+ +VI+ P YVHR GR RA G ++ + + Sbjct 548 STANPGTILVATDVAARGLDIKGIDFVIHYHAPRTADTYVHRSGRTARAGASGKSVIICS 607 Query 621 TEK 623 E+ Sbjct 608 PEE 610 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 40/62 (65%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PE ++ ++ + PT +Q IP IL G DV+ A TGSGKT AF +P+ Sbjct 196 ISAWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPILDGHDVIGKASTGSGKTLAFGLPI 255 Query 61 IQ 62 ++ Sbjct 256 LE 257 >sp|A5DLE0|DBP8_PICGU ATP-dependent RNA helicase DBP8 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP8 PE=3 SV=2 Length=433 Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 87/337 (26%), Positives = 148/337 (44%), Gaps = 57/337 (17%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 L++ P+RELA Q +QF + ++ +++GG Q ++ ++ TPGR Sbjct 73 LVLTPTRELALQIA---EQFLALGASMNIKVAVVVGGEDMVKQALEIQKSPHFIIATPGR 129 Query 350 LDD-LVSTGKLN---LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 L D ++++G L +++FLVLDEAD LLS + + R +P D + Q ++ Sbjct 130 LADHILNSGDDTVGGLKRIKFLVLDEADRLLSNSFGSDLERCFKILP----DASKRQTLL 185 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 +AT+ V+ L +K VP+ GK + Sbjct 186 FTATVTDA-VRALKDK--------------PVPE--------------------GKKPVF 210 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA--IIFCRTKIDCDNLE 523 ++ +KD A + +K Y + K ++A I+F + L Sbjct 211 IHEIVSKDQVAIPATLTISYVFVPSYVKEAYLHNILVSPKYEKASAIVFVNRTYTAEILR 270 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + LH + ER +L RF+ G R LI TDVA+RG+DI Sbjct 271 RTL---------RKLDIRVASLHSEMPQSERTNSLHRFRAGAARVLIATDVASRGLDIPN 321 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 V V+N +P + +Y+HR+GR RA + G ++S+V+ Sbjct 322 VELVVNQDIPADPDDYIHRVGRTARAGKKGGSVSIVS 358 Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/59 (46%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++GV + +A+ M PT IQAE IP IL G D + A+TGSGKT AF+ P++ Sbjct 2 SFKDLGVSKWLLEALAAMKIRSPTSIQAECIPQILAGRDCIGGAKTGSGKTIAFAAPMM 60 >sp|A7TJT7|SUB22_VANPO ATP-dependent RNA helicase SUB2-2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=SUB2-2 PE=3 SV=1 Length=442 Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 96/354 (27%), Positives = 155/354 (44%), Gaps = 70/354 (20%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN---G 339 +P +++ +RELA Q N +F KY+ P ++ + GG +L+N Sbjct 123 VPGEVSVVVICNARELAYQIRNEYLRFSKYM--PDVKTAVFYGGTPITKDAELLKNKETA 180 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV ++LS V+ V+DE D +L + + R I + T K Sbjct 181 PHIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELD---MRRDVQDIFRATPRDK 237 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDR 454 QV++ SATL S +++ + + + P +++ +D T+H ++ + N K + Sbjct 238 --QVMMFSATL-SEEIRPICRRFLQNP--LEIFVDDEAKLTLHGLQQYYIKLQENEKNRK 292 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L + L DD+ + +Q IIF + Sbjct 293 LAQLL-------DDL-----------------------------------EFNQVIIFVK 310 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 + + L + + F + +HG+ K ER + FK+ + R + TDV Sbjct 311 STKRANELTKLLNESN---------FPAITVHGNMKQAERIARYKAFKEFEKRICVSTDV 361 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT-EKEKVW 627 RGIDI + IN L E Y+HR+GR GR GLAIS V++ E E+V Sbjct 362 FGRGIDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSSPEDEEVL 415 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/59 (34%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+A+A+ + + P+++Q +IP + G DVL A++G GKT F + +Q Sbjct 60 FKDFLLKPELARAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQ 118 >sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis thaliana OX=3702 GN=RH57 PE=2 SV=1 Length=541 Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 145/334 (43%), Gaps = 65/334 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+I+ P+RELA QT ++ KK I L+ + S L D+++ TP Sbjct 212 RAVILSPARELAAQT---AREGKKLIKGSNFHIRLMTKPLVKTADFSKL--WCDVLISTP 266 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI--V 405 RL + K++LS+V +LVLDE+D L Q + QI V +I + Sbjct 267 MRLKRAIKAKKIDLSKVEYLVLDESDKLFEQS-------LLKQIDCVVKACSNPSIIRSL 319 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL V++L+ IMH D V ++ N ++ + ++L Sbjct 320 FSATLPD-SVEELARSIMH--------------DAVRVIIGRKNTASETVKQKL------ 358 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR-AIKEHKMDQAIIFCRTKIDCDNLEQ 524 V A SE K+L A+R + E +IF ++K L Sbjct 359 ---VFA-------------GSEEGKLL----ALRQSFAESLNPPVLIFVQSKERAKELYD 398 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 K +H D P ER+ +++F+ G+ LI TDV ARG+D G+ Sbjct 399 EL---------KCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGI 449 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 VIN PD Y+HRIGR GRA R G AI+ Sbjct 450 NCVINYDFPDSASAYIHRIGRSGRAGRSGEAITF 483 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/57 (39%), Positives = 33/57 (58%), Gaps = 0/57 (0%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 S G I + + E+ + PT IQ ++IP++L G + A TGSGKT AF P++ Sbjct 144 SRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFICPML 200 >sp|Q54TF8|DDX19_DICDI ATP-dependent RNA helicase ddx19 OS=Dictyostelium discoideum OX=44689 GN=helC PE=2 SV=1 Length=465 Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 99/347 (29%), Positives = 163/347 (47%), Gaps = 78/347 (22%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 NAP+A+ + P++ELA QT I + ++ + ++ LL I + ++ +++ Sbjct 138 NAPQAICISPTKELALQTFEVISKIGQFSN---IKPLLYISEIEVPKNVTN-----QVII 189 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL--Q 402 GTPG++ + V +L++ ++ +VLDEAD FI +M N Q+ + L Sbjct 190 GTPGKILENVIKKQLSVKFLKMVVLDEAD---------FIVKMKNVPNQIAMINRLLPSN 240 Query 403 VIVC--SATLHSFDVKKLSEKIMHFP-TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 V VC SAT S V++L +KI+ P T + LK ++ + +H + Sbjct 241 VKVCLFSATF-SMGVEELIKKIVQDPYTSIRLKRQELSVEKIHQYFI------------- 286 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 D ++DN +A+ IL Y ++ Q+I+F T Sbjct 287 --------DCGSEDN------------KAL-ILSDIYGFISV-----GQSIVFVHTIATA 320 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHG-DRKPHERKQNLERFKKGDVRFLICTDVAARG 578 ++ Q + +G S L+G D ER + ++ FK G + LI T+V ARG Sbjct 321 KSVHQKMVDEG---------HSVSLLYGKDLTTEERFKQIKDFKDGKSKVLITTNVLARG 371 Query 579 IDIHGVPYVINVTLPDEKQ------NYVHRIGRVGRAERMGLAISLV 619 IDI V VIN +P ++ +Y+HRIGRVGR R G+A+S V Sbjct 372 IDIPQVSLVINYDVPLDEMGKPDPVHYLHRIGRVGRFGRSGVALSFV 418 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 42/65 (65%), Gaps = 1/65 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMA-AETGSGKTGAFSIP 59 + F E+G+ PE+ + V M + P+ IQ ++P+I+ + L+A +++G+GKT AF++ Sbjct 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128 Query 60 VIQIV 64 ++ V Sbjct 129 MLNCV 133 >sp|Q6CSZ7|DHH1_KLULA ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DHH1 PE=3 SV=1 Length=514 Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 94/339 (28%), Positives = 142/339 (42%), Gaps = 68/339 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT ++ K+ + ++ GG RD + L V I+V Sbjct 103 NKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTNLRDDIMRLNEPVHILV 159 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ L+L+ R L E + ++R Sbjct 160 GTPGRV--------LDLASRRVTDLSECHLFIMDEADKMLSR------------------ 193 Query 405 VCSATLHSFDVKKLSEKIMHF-PTWVDLK-GEDSVPDTVHHVVVP--VNPKTDRLWERLG 460 D K L+E+I+ F P L + P TV +V NP L + L Sbjct 194 ---------DFKVLAEQILGFLPERRQLLLFSATFPVTVKEFMVKHLKNPHEINLMDELT 244 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 I ++ + + L ++ + +++QAIIFC + + Sbjct 245 LKGISQFYAFVEEKQK------------LHCLNTLFS-----KLQINQAIIFCNSTNRVE 287 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + + G FSC H K ER + F++G VR L+C+D+ RGID Sbjct 288 LLAKKITELG---------FSCYYSHARMKQSERNKVFHEFRQGKVRTLVCSDLLTRGID 338 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 I V VIN P + Y+HRIGR GR +GLAI+L+ Sbjct 339 IQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI 377 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + E+ + E + P+ IQ E+IP+ + G D+L A+ G+GKT AF IP ++ Sbjct 37 SFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLE 96 Query 63 IVYETLKDQQ 72 V L Q Sbjct 97 KVKPKLNKIQ 106 >sp|A2QS00|DBP4_ASPNC ATP-dependent RNA helicase dbp4 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp4 PE=3 SV=1 Length=802 Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 95/342 (28%), Positives = 147/342 (43%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q +++ +Y L+IGG + R++ L ++I+V TPG Sbjct 122 ALVLSPTRELAIQIFEVLRKVGRY---HTFSAGLVIGGKSLREEQERL-GRMNILVCTPG 177 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T ++ LVLDEAD +L G+ ++ + +P K Q ++ S Sbjct 178 RMLQHLDQTSFFETHNLQMLVLDEADRILDMGFQKTVDAIIGHLP------KERQTLLFS 231 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + V L+ + P +V + + P + H+VV P+ K D LW S Sbjct 232 AT-QTKKVSDLARLSLQDPEYVAVHEAASSATPSKLQQHYVVTPLPQKLDVLW-----SF 285 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IR++ + S+ I L VR + E Sbjct 286 IRSN----------------LKSKTIVFLSSGKQVRFV--------------------YE 309 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + LHG +K R +F L TDVAARG+D Sbjct 310 SFRHMQPGVP--------LMHLHGRQKQGGRLDITTKFSSAQHAVLFATDVAARGLDFPA 361 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI + P++ Y+HR+GR R ER G A+ + +EK Sbjct 362 VDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEK 403 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 38/62 (61%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + A + + TDIQ+ +I L G D+L AA+TGSGKT AF IP+++ Sbjct 49 FTDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPILEN 108 Query 64 VY 65 +Y Sbjct 109 LY 110 >sp|Q1EB31|DBP4_COCIM ATP-dependent RNA helicase DBP4 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP4 PE=3 SV=1 Length=806 Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 91/342 (27%), Positives = 150/342 (44%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ +Y L+IGG + +++ L ++I+V TPG Sbjct 123 ALILSPTRELAIQIFEVLRKIGRY---HTFSAGLVIGGKSLQEEQERL-GRMNILVCTPG 178 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L + T + + ++ LVLDEAD ++ G+ ++ + +P K Q ++ S Sbjct 179 RMLQHMDQTAAFDTAHIQMLVLDEADRIMDMGFQSTVDAIVEHLP------KERQTMLFS 232 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + V L+ + P ++ + + P ++ H+VV P+ K D LW S Sbjct 233 AT-QTKKVSDLARLSLRDPEYISVHEAASSATPASLQQHYVVTPLPEKLDTLW-----SF 286 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IR NT + S+ + VR + E Sbjct 287 IR--------NT--------LKSKILVFFSSSKQVRFV--------------------YE 310 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + LHG +K R +F + L TDVAARG+D Sbjct 311 AFRHMQPGIP--------LLHLHGRQKQSARIDITSKFSRAKYSCLFSTDVAARGLDFPA 362 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI + P++ Y+HR+GR R ER G A+ + +E+ Sbjct 363 VDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEE 404 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 40/63 (63%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FSE+ + Q + + TDIQ+ ++P + G D+L AA+TGSGKT AF +PV++ Sbjct 49 SFSELPLSDATLQGLSASHFKTLTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLE 108 Query 63 IVY 65 +Y Sbjct 109 NLY 111 >sp|Q00PI9|HNRL2_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2 Length=745 Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 54/139 (39%), Positives = 79/139 (57%), Gaps = 13/139 (9%) Query 119 WHGCRATKGLMKGKHYYEVS----------CHDQGLCRVGWSTMQASLDLGTDKFGFGFG 168 W G R+T G+ KGK +E C + L RVGWS + LG D+F +GF Sbjct 276 WSGARSTYGVTKGKVCFEAKVTQNLPMKEGCTEVSLLRVGWSVDFSCSQLGEDEFSYGFD 335 Query 169 GTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVK--FSKNGKDLGLAFEIPPH-MKNQ 225 G G K+ N QF+ +G+ F +D IGC+ + + V+ FSKNG+DLG+AF I + ++ Sbjct 336 GRGLKAENGQFEEFGQTFGENDVIGCFANFETEEVELSFSKNGEDLGVAFRISKESLADR 395 Query 226 ALFPACVLKNAELKFNFGE 244 AL P + KN ++ NFG+ Sbjct 396 ALLPHVLCKNCVVELNFGQ 414 >sp|Q0UMB9|DBP4_PHANO ATP-dependent RNA helicase DBP4 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP4 PE=3 SV=1 Length=803 Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 94/342 (27%), Positives = 147/342 (43%), Gaps = 64/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q + + + K+ L+IGG + + L ++I+V TPG Sbjct 125 ALILSPTRELAIQIFDVLCKIGKH--GHMFAAGLLIGGKSLESERQALPR-MNILVATPG 181 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T + ++ LVLDEAD +L G+ ++ + + +P K Q ++ S Sbjct 182 RMLQHLSQTAAFLVDDLKMLVLDEADRILDMGFQRDVDAIIDYLP------KERQTLLFS 235 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT S V L+ + P +V + ED + P ++ ++++ P+ K D LW S Sbjct 236 AT-QSKKVSDLARLSLQDPEYVSVHAEDKSATPKSLQQNYIICPLEEKLDTLW-----SF 289 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+ S+ KIL + F K E Sbjct 290 IQA-------------------SKKSKIL-----------------VFFSSAKAVRFVYE 313 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + +HG +K R +F L TDVAARG+D Sbjct 314 SFRHMQPGIP--------LLHIHGRQKQGARLDTTAKFSSAKNSCLFATDVAARGLDFPA 365 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI V PD+ Y+HR+GR R R G + +A +E+ Sbjct 366 VDFVIQVDCPDDVDTYIHRVGRTARYNREGRGVLFLAPSEEE 407 Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 26/62 (42%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + Q ++ + + TDIQ +++PL L G D+L AA+TGSGKT +F IPV++ Sbjct 51 FSDLPLSDPTKQGLKACHFAVMTDIQRKAVPLALKGHDILGAAKTGSGKTLSFIIPVLEN 110 Query 64 VY 65 +Y Sbjct 111 LY 112 >sp|Q2UHB7|DBP4_ASPOR ATP-dependent RNA helicase dbp4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp4 PE=3 SV=1 Length=796 Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 93/341 (27%), Positives = 150/341 (44%), Gaps = 65/341 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ +Y LIIGG + +++ L ++I+V TPG Sbjct 120 ALILSPTRELAIQIFEVLRKIGRY---HTFSAGLIIGGKSLKEEQERL-GRMNILVCTPG 175 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T ++ ++ LVLDEAD +L G+ ++ + +P K Q ++ S Sbjct 176 RMLQHLDQTAMFDVFNLQMLVLDEADRILDMGFQKTVDAIVGHLP------KERQTLLFS 229 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + V L+ + P +V + + P T+ H+VV P++ K D LW S Sbjct 230 AT-QTKKVSDLARLSLQDPEYVAVHETASSATPSTLQQHYVVTPLSQKLDVLW-----SF 283 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IR++ + ++ I L VR + E Sbjct 284 IRSN----------------LKAKTIVFLSSGKQVRFV--------------------YE 307 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + LHG +K R +F + L TD+ ARG+D Sbjct 308 SFRHLQPGIP--------LMHLHGRQKQGGRLDITAKFSQAKHAVLFSTDITARGLDFPA 359 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V +VI + P++ Y+HR+GR R ER G A+ + +E Sbjct 360 VDWVIQMDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEE 400 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 39/63 (62%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ + A + + TDIQ+ +I L G D+L AA+TGSGKT AF IPV++ Sbjct 46 SFSDLPLSEPTASGLASSHFKTLTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVLE 105 Query 63 IVY 65 +Y Sbjct 106 NLY 108 >sp|Q09747|DBP5_SCHPO ATP-dependent RNA helicase dbp5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp5 PE=1 SV=1 Length=503 Score = 100 bits (248), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 90/359 (25%), Positives = 154/359 (43%), Gaps = 99/359 (28%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV-LENGVDIVVG 345 P+A+ + PSRELA Q ++ + + KY + + +D + + IV+G Sbjct 185 PQAICLAPSRELARQIMDVVTEMGKYTE--------VKTAFGIKDSVPKGAKIDAQIVIG 236 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPG + DL+ +L+ ++ VLDEAD +L QG D R+ + +P+ T Q++ Sbjct 237 TPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNT------QIV 290 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT SE++ ++ ER Sbjct 291 LFSATF--------SERV------------------------------EKYAERFA---- 308 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKI--LKGEYAVRAIKEHKMD------------QAI 510 P AN + +E + + +K Y +EHK + Q+I Sbjct 309 ------------PNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSI 356 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC+ K + + + G + CL G+ + +R ++ F+ G + L+ Sbjct 357 IFCKKKDTAEEIARRMTADG---------HTVACLTGNLEGAQRDAIMDSFRVGTSKVLV 407 Query 571 CTDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLVATEK 623 T+V ARGID+ V V+N +P ++ Q Y+HRIGR GR R+G++I+ V +K Sbjct 408 TTNVIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKK 466 >sp|Q0DBS1|RH51_ORYSJ Putative DEAD-box ATP-dependent RNA helicase 51 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0535100 PE=3 SV=2 Length=590 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 90/366 (25%), Positives = 162/366 (44%), Gaps = 68/366 (19%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + + +F P N +++ P+RELA QT N K+ +Y +IGG+ R + Sbjct 148 LCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQTLG---YVIGGIDLRGEAEQ 204 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L G++++V TPGR LD + T ++ L++DEAD +L Q + + + ++ +P+ Sbjct 205 LAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPR- 263 Query 395 TSDGKRLQVIVCSATLHSFDVKKLS----EKIMHFPTWVDLKGEDSVPDTVH-----HVV 445 G++ + + T D KL+ E+ +V + +S TV + V Sbjct 264 --QGRQTVLFSATQTEKVEDFAKLTFGSKEERQRTLVYVGVDDHES-KATVEGLKQGYCV 320 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 +P + L+ L K+ SE K++ + ++K H Sbjct 321 IPSERRFLVLYAFLKKA----------------------LSEKTKVMVFFSSCNSVKFH- 357 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 A + +I+C + +HG K H+R +F K + Sbjct 358 ---AQLLNFIQIECYD-----------------------IHGQLKQHQRTSTFFKFHKAE 391 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATEKE 624 L+CT+VAARG+DI V Y++ PDE ++Y+HR+GR R + G AI + ++ Sbjct 392 HGILLCTNVAARGLDIPDVDYIVQYDPPDETKDYIHRVGRTARGDNGKGSAILFLLPKEL 451 Query 625 KVWYHV 630 ++ H+ Sbjct 452 QLLIHL 457 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + A A+ +M++ T+IQA SIP ++ G DV+ +A+TGSGKT AF IP I++ Sbjct 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIEL 147 Query 64 V 64 + Sbjct 148 L 148 >sp|Q55BR9|DDX49_DICDI Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 GN=ddx49 PE=3 SV=1 Length=508 Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 149/333 (45%), Gaps = 58/333 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+I+ P+RELA Q +QF + ++IGG+ Q +L+ I+V TPG Sbjct 75 AVILTPTRELAVQIG---EQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPHIIVATPG 131 Query 349 RLDDLVSTG-KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL ++ G K+ L +FLVLDEAD LL + + I + +P ++ Q ++ S Sbjct 132 RLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLPP----PEKRQTLLFS 187 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ ++ KL ++ P + ++S DTV + L + +I Sbjct 188 ATMTK-NLTKLDSIALNKPFIFE---DNSKYDTV---------------DTLKQEYIYM- 227 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 P K Y V +K+H+ AI+F +C Y + Sbjct 228 ---------PAPT------------KDCYLVYILKKHEGSSAIVFVN---NC-----YAV 258 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G K V LH R L+ FK G V+ L+ TDVA+RG+DI V V Sbjct 259 EAVKGMLNK-LDIPSVSLHSFLDQKSRLAALKTFKSGKVKVLVATDVASRGLDIPDVQIV 317 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 IN L + ++Y+HR+GR R R G AIS + Sbjct 318 INYKLSNSSKDYIHRVGRTARFGRSGRAISFIT 350 Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 24/64 (38%), Positives = 43/64 (67%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E+G+ + +++ + P++IQA +IP IL G D++ +A+TGSGKT +F+IP++ Sbjct 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64 Query 63 IVYE 66 + E Sbjct 65 QLSE 68 >sp|Q7RYZ7|DBP8_NEUCR ATP-dependent RNA helicase dbp-8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-8 PE=3 SV=1 Length=626 Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 103/397 (26%), Positives = 164/397 (41%), Gaps = 63/397 (16%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLENGVDI 342 P+A +I+ P+RELA Q + + + P L+ +LI GG R Q L + Sbjct 261 PSAIFGVILTPTRELALQIMEQVIALSQ----PHVLKAVLITGGADMRKQAIDLAKRPHL 316 Query 343 VVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQ-GYSDFINRMHNQIPQVTSD 397 V+ TPGRL D + T + L +V+F+VLDEAD LL+ G+ + + + Sbjct 317 VIATPGRLADHIRTSGEDTICGLRRVKFIVLDEADRLLANSGHGSMLPDVEECFSVLPPP 376 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 +R Q ++ +AT+ + +VK LSE+ +P V V+ + + Sbjct 377 SER-QTLLFTATM-TPEVKALSER-------------PPIPGRAPVFVCEVDTQRLAIPA 421 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L + H++ H + +P+ +++ IIFC Sbjct 422 TLRQMHLQVPVTHREHYLHMFLLTPQNVDKSV--------------------IIFCNRTS 461 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + LH +R NL RF+ R L+ TDVAAR Sbjct 462 TADFLHHL---------LRLLDHRVTSLHSKLPQSQRIDNLGRFRASAARILVATDVAAR 512 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 G+DI V VIN +P + +Y+HR+GR RA R G A++ V + + G+ Sbjct 513 GLDIPEVKIVINYDIPRDPDDYIHRVGRTARAGRKGDAVTFVGQRDVDLVLAIEQRVGRQ 572 Query 638 C---------YNTRLKEDGGCTIWYNEMQLLSEIEEH 665 TR+ D + + + L EIEE Sbjct 573 MEAWTEEGVNLETRVIRDALKVVGEKKREALLEIEEQ 609 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + V P + Q++ M PT IQ IP IL G D + + TGSGKT AF++P++Q Sbjct 197 FDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQ 255 >sp|Q07886|DDX49_DROME Probable ATP-dependent RNA helicase Dbp45A OS=Drosophila melanogaster OX=7227 GN=Dbp45A PE=2 SV=2 Length=521 Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 97/333 (29%), Positives = 146/333 (44%), Gaps = 59/333 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+ ELA Q +QF +R ++ GG + L IVV PG Sbjct 78 ALVLTPTHELAYQI---SEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPG 134 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L + +++LV+DEAD +L+ + + ++ + +P K Q + S Sbjct 135 RLADHLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLP------KTRQNLFFS 188 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLK--GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 AT+ F +K+ S FP D +DS TV E L + ++ Sbjct 189 ATMKDF-IKESS----IFPIASDCFEWSQDSDVATV---------------ETLDQRYLL 228 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 D + + EA++ + +E++ +IF TK C L Sbjct 229 CADY----------DRDMVLIEALRKYR--------EENENANVMIFTNTKKYCQLLSMT 270 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 K + VCLHG + ER L RFK +R LI TDVAARG+DI V Sbjct 271 L---------KNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVE 321 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V+N LP + Y+HR+GR RA R G++IS+ Sbjct 322 LVMNHMLPRTPKEYIHRVGRTARAGRKGMSISI 354 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 40/63 (63%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +G+ P + + + ++ T IQ + IP IL G D + AA+TGSGKT AF++P+++ Sbjct 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68 Query 64 VYE 66 + E Sbjct 69 LSE 71 >sp|Q9ESV0|DDX24_MOUSE ATP-dependent RNA helicase DDX24 OS=Mus musculus OX=10090 GN=Ddx24 PE=1 SV=2 Length=857 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/366 (27%), Positives = 158/366 (43%), Gaps = 66/366 (18%) Query 276 QVTQTKFLPNAPK-ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 Q+ K P P L++ P+RELA Q +I K+ + +++GG++ + Q Sbjct 376 QIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAKFTG---INTAILVGGMSTQKQQR 432 Query 335 VLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 +L +IV+ TPGRL +LV NL Q+R LV+DEAD ++ +G+ ++++ + Sbjct 433 MLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEML 492 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 + R Q +V SATL V + +I+H + D K Sbjct 493 NDSQYNPSR-QTLVFSATLTL--VHQAPARILHKKHVKKMDKTD---------------K 534 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 D L +++G +P + I + + E V + E K I Sbjct 535 LDLLMQKVGM------------RGKP---------KVIDLTRNEGTVETLTETK-----I 568 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV---------------CLHGDRKPHERKQ 556 C T L + +Q G + SC+ LH +R + Sbjct 569 HCETDEKDLYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLR 628 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 NLE+F + L+ TDVAARG+DI V +VI+ +P + Y+HR GR RA GL++ Sbjct 629 NLEQFARLQDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIHRSGRTARAASEGLSL 688 Query 617 SLVATE 622 L+ E Sbjct 689 MLIGPE 694 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIP 59 ++A+ ++ V + +A+ + + PT IQA ++ P I D+L AAETGSGKT AF+IP Sbjct 192 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 251 Query 60 VIQIVYE 66 +I V + Sbjct 252 MIHSVLQ 258 >sp|Q6AZV7|DDX55_XENLA ATP-dependent RNA helicase DDX55 OS=Xenopus laevis OX=8355 GN=ddx55 PE=2 SV=1 Length=594 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 97/348 (28%), Positives = 152/348 (44%), Gaps = 57/348 (16%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-E 337 + K N ALI+ P+RELA Q + F K+ P+ ++L+IGG D + E Sbjct 75 EEKLKKNQVGALIITPTRELAVQIDEVLSCFTKHF--PQFSQILLIGGSNPVDDVRKFKE 132 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQV------RFLVLDEADGLLSQGYSDFINRMHNQI 391 +G +I+V TPGRL+D+ L V L+LDEAD LL G+ IN + + Sbjct 133 HGGNIIVATPGRLEDMFRRQADGLDLVICVKTLDVLILDEADRLLDMGFEASINTILGFL 192 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P+ G + SAT + +++ L + P + +K E V T Sbjct 193 PKQRRTG------LFSAT-QTQELENLVRAGLRNPVRIAVK-EKGVAATSTQ-------- 236 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 K+ IR + + + E +++ I L+ + K ++ ++ Sbjct 237 ---------KTPIRLQNYYM------ICKADEKFNKLIAFLQ---------KRKQEKHLV 272 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T C +E Y G + +C+HG K H+R + F+K + L+C Sbjct 273 FFST---CACVEYY----GKALEMLLKPVKVMCIHGKMK-HKRNRIFTEFRKINSGILVC 324 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 TDV ARGIDIH V +V+ P +VHR GR R G A+ + Sbjct 325 TDVMARGIDIHEVNWVVQYDPPSSASAFVHRCGRTARIGHHGSALVFL 372 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 3/65 (5%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY---ETLK 69 I + +EE+ + T +Q+ +IPL + D+ A TGSGKT AF IP+++I+ E LK Sbjct 20 IRRTLEELKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKTLAFVIPLLEILLKREEKLK 79 Query 70 DQQEG 74 Q G Sbjct 80 KNQVG 84 >sp|A7TLA0|SUB21_VANPO ATP-dependent RNA helicase SUB2-1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=SUB2-1 PE=3 SV=1 Length=441 Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 153/349 (44%), Gaps = 60/349 (17%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN---G 339 +P +++ +RELA Q N +F KY+ P ++ + GG +L+N Sbjct 122 VPGEVSVVVICNARELAYQIRNEYLRFSKYM--PDVKTAVFYGGTPINKDAELLKNKETA 179 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV ++LS V+ V+DE D +L + + R I + T K Sbjct 180 PHIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELD---MRRDVQDIFRATPRDK 236 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SATL S +++ + + + P +++ +D T+H + + + +L Sbjct 237 --QVMMFSATL-SEEIRPICRRFLQNP--LEIFVDDEAKLTLHGL--------QQYYTKL 283 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 ++ K + + + + +Q IIF ++ Sbjct 284 QENE-----------------------------KNRKLAQLLDDLEFNQVIIFVKSTKRA 314 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + + F + +HG K ER + FK+ + R + TDV RGI Sbjct 315 NELTKLLNESN---------FPAITVHGHMKQAERIARYKAFKEFEKRICVSTDVFGRGI 365 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT-EKEKVW 627 DI + IN L E Y+HR+GR GR GLAIS V++ E E+V Sbjct 366 DIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSSPEDEEVL 414 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 20/59 (34%), Positives = 36/59 (61%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + PE+A+A+ + + P+++Q +IP + G DVL A++G GKT F + +Q Sbjct 59 FKDFLLKPELARAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQ 117 >sp|Q6CQA1|MS116_KLULA ATP-dependent RNA helicase MSS116, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=MSS116 PE=3 SV=1 Length=685 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 56/353 (16%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL---RELLIIGGVAARDQLSVLEN-G 339 P A KA+IV P+R+LA Q + +K+ ++ NP L R L +IGG L L Sbjct 209 PLAVKAVIVTPTRDLAIQIASEVKKLQQC--NPSLKSYRSLTLIGGTNLDKSLKDLHTLN 266 Query 340 VDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 +I+VGTPGR++D++ G V F VLDEAD LL G+ ++ + ++ + + G Sbjct 267 PNIIVGTPGRINDILDRVGAKYFKDVDFKVLDEADTLLQIGFQTELSLISRKLNEFNTQG 326 Query 399 KR-LQVIVCSATLHSFDVKKLSEKIMH-----FPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 + ++ ++ SAT+ +V++L+ IM+ F VD K + D++ +V Sbjct 327 EEHIRTLLFSATM-DHNVQELAATIMNKKDCLFIDTVD-KNDSEAHDSIDQKLV------ 378 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 + KS E I+ ++ E + + K +AI+F Sbjct 379 ------ITKSF------------------AESMVALIQSIESE-----LLQKKNFKAILF 409 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 T D + + + + HG +R + ++RFKK + +CT Sbjct 410 LPTVKFVDFFSETL------SESLTKRIDIIKFHGKIDQKKRTKLVDRFKKTNHGIFVCT 463 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 DV ARG+ V +V + +P NY+HRIGR RA G A + E+ K Sbjct 464 DVGARGMHFPSVEHVYQLCVPTSLPNYIHRIGRTARAGESGAATIFLFREELK 516 Score = 36.6 bits (83), Expect = 0.91, Method: Compositional matrix adjust. Identities = 19/56 (34%), Positives = 32/56 (57%), Gaps = 1/56 (2%) Query 13 IAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 + +A+ M + T +Q +I P++ DV+ A+TG+GKT AF P+ Q + T Sbjct 149 VHKAISAMKFESLTPVQQRTIKPILTTENDVVAKAKTGTGKTLAFLAPLFQHLIST 204 >sp|Q7RZ35|DBP4_NEUCR ATP-dependent RNA helicase dbp-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-4 PE=3 SV=1 Length=823 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 147/342 (43%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ + N L+IGG + +++ L ++I+V TPG Sbjct 132 ALIISPTRELAVQIFEVLRKIGR---NHSFSAGLVIGGKSLKEEAERL-GRMNILVCTPG 187 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T ++ ++ LVLDEAD ++ G+ ++ + +P K Q ++ S Sbjct 188 RMLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLP------KSRQTLLFS 241 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV----HHVVVPVNPKTDRLWERLGKSH 463 AT S V L+ + P +V + + V H++V P+ K D LW Sbjct 242 AT-QSKRVSDLARLSLKDPEYVSVHEAAASATPVGLQQHYIVTPLPEKLDTLW-----GF 295 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +RT+ + S+ I + VR + E F R Sbjct 296 LRTN----------------LKSKIIVFMSSGKQVRFVYES-------FKRM-------- 324 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 Q G P + LHG +K R + RF L TDV ARG+D Sbjct 325 -----QPGIP--------LLHLHGRQKQIARLEITNRFTSAKYSCLFATDVVARGVDFPA 371 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI V P++ Y+HR+GR R E G A+ + +E+ Sbjct 372 VDWVIQVDCPEDADTYIHRVGRTARYESKGRAVLFLDPSEEE 413 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/62 (42%), Positives = 39/62 (63%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + A + + + TD+Q +IPL L G D+L AA TGSGKT AF +PV++ Sbjct 59 FSDLPLCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEK 118 Query 64 VY 65 +Y Sbjct 119 LY 120 >sp|P90897|RDE12_CAEEL DEAD-box ATP-dependent RNA helicase rde-12 OS=Caenorhabditis elegans OX=6239 GN=rde-12 PE=1 SV=4 Length=959 Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 146/350 (42%), Gaps = 53/350 (15%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P ALI+ P+RELA Q + + Y N + LL G L+ + NG DI++ Sbjct 457 DGPLALILAPTRELAAQIH---EALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILI 513 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV--TSDGKRLQ 402 GT GR+ D ++L +RFLV DEAD LL D + + I Q Sbjct 514 GTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPLGHLGAIIKDAGFMESAATRQ 573 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 I+ SAT ++ + +E + P G+D ++ + RL +R+ Sbjct 574 TIMTSATFNASVMTVANELMKRLP------GQDE--------MIKIVLANGRLSKRVNLE 619 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + K+ ++ +ILK + +K IIF + K CD Sbjct 620 FFECKGLAEKN------------AKLREILKQNVNGKTLK------TIIFVQKKDQCDAC 661 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 G LHGDR R++ + FK V L+ TD+ +RGID+ Sbjct 662 AAKLTSGG---------MLAQTLHGDRSQDMREKLINDFKSNRVNLLVTTDLLSRGIDVS 712 Query 583 GVPYVINVTLPDEKQN-----YVHRIGRVGRAERM--GLAISLVATEKEK 625 + VIN LPD + ++HR GR GR R GL +S V + ++ Sbjct 713 DLDRVINFDLPDGDPDQGADTFIHRAGRTGRTGRKENGLCVSFVDPQSDR 762 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 37/64 (58%), Gaps = 0/64 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +++ G+ P I + ++ + + IQ IP +L G DVL AET +GKT AF +P+ Sbjct 379 LTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPI 438 Query 61 IQIV 64 I + Sbjct 439 IDKI 442 >sp|Q3EBD3|RH41_ARATH DEAD-box ATP-dependent RNA helicase 41 OS=Arabidopsis thaliana OX=3702 GN=RH41 PE=2 SV=1 Length=505 Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 81/341 (24%), Positives = 145/341 (43%), Gaps = 57/341 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+REL Q + K K + + L++GG QL ++ GV++++GT Sbjct 187 PLAMVLAPTRELCVQVEDQAKMLGKGL---PFKTALVVGGDPMSGQLYRIQQGVELIIGT 243 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL+S + L + VLDE D +L +G+ D Q+ Q+ + QV++ Sbjct 244 PGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRD-------QVMQIFQALSQPQVLLF 296 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT+ S +V+K+ + V + G + P+ Sbjct 297 SATI-SREVEKVGGSLAKEIILVSI-GNPNKPNK-------------------------- 328 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 N +W +A + + + + + H A+++ +++ D L Sbjct 329 -----------AVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLANAI 377 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 G + +HG++ ER+ + F G+V L+ T V RG+D+ V Sbjct 378 TVVTG--------VKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQ 429 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 VI +P + Y+H IGR R G AI V + ++ Sbjct 430 VIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLF 470 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+ G+ P++ +E + PT IQ ++IP L G +L +A+TGSGKT +F +P+I Sbjct 112 FTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPII 169 >sp|Q5BFU1|DBP4_EMENI ATP-dependent RNA helicase dbp4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp4 PE=3 SV=1 Length=812 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 147/342 (43%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ +Y L+IGG + +++ L ++I+V TPG Sbjct 123 ALIISPTRELAIQIFEVLRKIGRY---HTFSAGLVIGGKSLKEEQERL-GRMNILVCTPG 178 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T ++ LVLDEAD ++ G+ ++ + +P Q ++ S Sbjct 179 RMLQHLDQTAFFETYNLQMLVLDEADRIMDMGFQKTVDAIIGHLP------PERQTLLFS 232 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + V L+ + P +V + + P + H+VV P+ K D LW S Sbjct 233 AT-QTKKVSDLARLSLQDPEYVAVHEAASSATPSKLQQHYVVTPLPQKLDTLW-----SF 286 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IR++ + S+ I + VR + E Sbjct 287 IRSN----------------LKSKTIVFMSSGKQVRFV--------------------YE 310 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + LHG +K R RF + L TDVAARG+D Sbjct 311 SFRHMQPGIP--------LLHLHGRQKQGGRLDITTRFSQAQHAVLFSTDVAARGLDFPA 362 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI + P++ Y+HR+GR R ER G A+ + +EK Sbjct 363 VDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEK 404 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ + + + TDIQ+ +I L G DVL AA+TGSGKT AF +P+++ Sbjct 49 SFSDLPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILE 108 Query 63 IVY 65 +Y Sbjct 109 NLY 111 >sp|Q9UHI6|DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 OS=Homo sapiens OX=9606 GN=DDX20 PE=1 SV=2 Length=824 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 86/333 (26%), Positives = 141/333 (42%), Gaps = 60/333 (18%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 LI+ P+RE+A Q + I ++ L + IGG + L+ I VG+PGR Sbjct 134 LILAPTREIAVQIHSVITAIGIKMEG--LECHVFIGGTPLSQDKTRLKK-CHIAVGSPGR 190 Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQG-YSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 + L+ LN +R +LDEAD LL +G + + IN +++ +P Q++ SA Sbjct 191 IKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASK------QMLAVSA 244 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV----HHVVVPVNPKTDRLWERLGKSHI 464 T F L+ K M PT+V L D P + ++ VV P +++E Sbjct 245 TYPEFLANALT-KYMRDPTFVRLNSSD--PSLIGLKQYYKVVNSYPLAHKVFEE------ 295 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 K ++ +QA++F +L Sbjct 296 ----------------------------KTQHLQELFSRIPFNQALVFSNLHSRAQHLAD 327 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 +G F C+ G+ ++R + + K R LI TD+ +RGID V Sbjct 328 ILSSKG---------FPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKV 378 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 V+N+ +P + + Y+HRIGR GR +GL ++ Sbjct 379 NLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVT 411 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/48 (40%), Positives = 31/48 (65%), Gaps = 1/48 (2%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFS-IPVIQIVYETLKDQ 71 P+ +Q ++IPL G D+++ A++G+GKT FS I + +V E L Q Sbjct 85 PSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQ 132 >sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo sapiens OX=9606 GN=HNRNPUL2 PE=1 SV=1 Length=747 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/139 (39%), Positives = 79/139 (57%), Gaps = 13/139 (9%) Query 119 WHGCRATKGLMKGKHYYEVS----------CHDQGLCRVGWSTMQASLDLGTDKFGFGFG 168 W G R+T G+ KGK +E C + L RVGWS + LG D+F +GF Sbjct 278 WSGARSTYGVTKGKVCFEAKVTQNLPMKEGCTEVSLLRVGWSVDFSRPQLGEDEFSYGFD 337 Query 169 GTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVK--FSKNGKDLGLAFEIPP-HMKNQ 225 G G K+ N QF+ +G+ F +D IGC+ + + V+ FSKNG+DLG+AF I + ++ Sbjct 338 GRGLKAENGQFEEFGQTFGENDVIGCFANFETEEVELSFSKNGEDLGVAFWISKDSLADR 397 Query 226 ALFPACVLKNAELKFNFGE 244 AL P + KN ++ NFG+ Sbjct 398 ALLPHVLCKNCVVELNFGQ 416 >sp|Q59MW2|DBP6_CANAL ATP-dependent RNA helicase DBP6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP6 PE=3 SV=2 Length=606 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 91/363 (25%), Positives = 163/363 (45%), Gaps = 45/363 (12%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DIVVGTPG 348 +I+ P++ L Q + + Q L+ + V+ D+ L V DI+V TPG Sbjct 253 IILVPTKPLINQVKSTLLQLSS---GTNLQIAALKNDVSINDEKDSLTKSVPDIIVSTPG 309 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK----RLQVI 404 RL + + +NLS +++L++DEAD LL+Q + ++ N + ++I + + +Q + Sbjct 310 RLVEHLLNDSINLSSLQYLIIDEADRLLNQSFQNWSNVLLDKIDSQINIAEVWKLSVQKL 369 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 V SATL + D KLS + P + + + + + V V ++ K H+ Sbjct 370 VFSATLTT-DAGKLSSLKFYNPRLIIVNDSKQLVNEIFTVPVTLSE---------FKIHL 419 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 AK++ +P ++ ++ I +K+ +IF ++ L + Sbjct 420 GV----AKNSLKP-------------LILTKFL---ISTNKLSNVLIFTKSNESSIRLTE 459 Query 525 YFIQQGGGPDKKGHQFSCVCLHG-DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 K ++ + + R + L++F +V LI TD+ ARGID+ Sbjct 460 LLTSLF---QKLSINLKIAFINSTNNRTSIRSKILKQFSNQEVNILITTDLIARGIDVAS 516 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS---SRGKGCYN 640 + VIN LP+ + YVHR+GR RA ++G A S + E W+ + SR K N Sbjct 517 ITDVINYDLPNSSREYVHRVGRTARANQVGYAYSFCFGKGENSWFKKLAHEVSRSKEVEN 576 Query 641 TRL 643 L Sbjct 577 VDL 579 Score = 40.4 bits (93), Expect = 0.060, Method: Compositional matrix adjust. Identities = 23/63 (37%), Positives = 40/63 (63%), Gaps = 4/63 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +MG + + ++ +LP +I+A+ + P +G D+L+ A TGSGKT A+SIP+I+ Sbjct 184 LEKMGFTEAFSVQISVLNMMLP-EIEAQKLKPDRVG--DILVNASTGSGKTLAYSIPIIE 240 Query 63 IVY 65 +Y Sbjct 241 SLY 243 >sp|Q9SB89|RH27_ARATH DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana OX=3702 GN=RH27 PE=2 SV=2 Length=633 Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 95/349 (27%), Positives = 152/349 (44%), Gaps = 60/349 (17%) Query 279 QTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + KF P N L++ P+RELA Q+ K+ KY + +IGG + + +L Sbjct 218 RVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQTVGK---VIGGEKRKTEAEILA 274 Query 338 NGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 GV+++V TPGRL D L +T ++FLV+DEAD +L Q + + + ++ N +P Sbjct 275 KGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLP---- 330 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL-KGEDSVPDTVHHVVVPVNPKTDRL 455 K Q + SAT S V+ L+ + P ++D+ +G V + V P RL Sbjct 331 --KTRQTSLFSAT-QSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAMRL 387 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 L + + KI+ ++ K H A +F Sbjct 388 LFLL--------------------TFLKRFQGKKKIMVFFSTCKSTKFH----AELFRYI 423 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K DC ++ GG D+ ++R +F K + L+CT+VA Sbjct 424 KFDC-------LEIRGGIDQ----------------NKRTPTFLQFIKAETGILLCTNVA 460 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ARG+D V +++ PD +Y+HR+GR R E LV T +E Sbjct 461 ARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQE 509 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++++EM + T IQA++IP ++ G DVL AA TGSGKT AF IP ++ Sbjct 155 TFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVE 214 Query 63 IVY 65 ++Y Sbjct 215 LLY 217 >sp|Q09775|ROK1_SCHPO ATP-dependent RNA helicase rok1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rok1 PE=3 SV=1 Length=481 Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 94/362 (26%), Positives = 151/362 (42%), Gaps = 67/362 (19%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFK-----KYIDNPKLRELLIIGGVAARDQLSVLE 337 +P +A+IV P+REL EQ ++ K I+ K E + +++ L Sbjct 112 VPGGYRAIIVAPTRELCEQIYRQAEKLSFGTSLKIIELSKSNEKI-------QEKAPKLR 164 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 D+ +GTP RL + TG L+ +V F V+DEAD L G FI + + + TS Sbjct 165 EKYDMCIGTPMRLVQAIQTG-LSFEKVEFFVMDEADRLFEPG---FIEQTDHILSACTSS 220 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 +C + + P+ V+ + D + +V + TD + + Sbjct 221 N------ICKSLFSA-----------TIPSRVEELAKVVTVDPIRIIVGLKDAATDSIDQ 263 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 RL G+++ ++ I GE R + IF + Sbjct 264 RL---------------LFVGSDTSKIVILRQMISNGELKPRVV---------IFVQ--- 296 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D + + + + G +HG+ +R++ L +F+KG++ LI TD+ AR Sbjct 297 DIERAKALYTELLFDEIHVG------VIHGELPQAKREEALAKFRKGEIWVLIATDLLAR 350 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK-EKVWYHVCSSRGK 636 GID HGV VIN P +Y+HRIGR GRA G A++ E E + R Sbjct 351 GIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKEDGEYIKLIAGVMRSS 410 Query 637 GC 638 GC Sbjct 411 GC 412 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 18/37 (49%), Positives = 23/37 (62%), Gaps = 0/37 (0%) Query 26 TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 T IQ +IP I D+L A TGSGKT A+ P++Q Sbjct 70 TTIQRYAIPTIGSKRDLLACAPTGSGKTIAYLFPILQ 106 >sp|A1DNF9|DBP4_NEOFI ATP-dependent RNA helicase dbp4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp4 PE=3 SV=1 Length=810 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 150/342 (44%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ +Y L+IGG + +++ L ++I+V TPG Sbjct 122 ALILSPTRELAIQIFEVLRKIGRY---HTFSAGLVIGGKSLKEEQERL-GRMNILVCTPG 177 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T + ++ LVLDEAD +L G+ ++ + +P K Q ++ S Sbjct 178 RMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLP------KERQTLLFS 231 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + V L+ + P +V + + P + H+V+ P+ K D LW S Sbjct 232 AT-QTKKVSDLARLSLQDPEYVAVHETASSATPSKLQQHYVITPLPQKLDILW-----SF 285 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IR++ + S+ + L VR + E Sbjct 286 IRSN----------------LKSKTMVFLSSGKQVRFV--------------------YE 309 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + LHG +K R + RF + L TDVAARG+D Sbjct 310 SFRHLQPGIP--------LMHLHGRQKQGGRLDIVTRFSQSKHCVLFSTDVAARGLDFPA 361 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI + P++ Y+HR+GR R ER G A+ + +E+ Sbjct 362 VDWVIQLDCPEDADTYIHRVGRTARYEREGRAVLFLDPSEEE 403 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 39/63 (62%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ + A + + TDIQ+ +I L G DVL AA+TGSGKT AF +PV++ Sbjct 48 SFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLE 107 Query 63 IVY 65 +Y Sbjct 108 NLY 110 >sp|Q13206|DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 OS=Homo sapiens OX=9606 GN=DDX10 PE=1 SV=2 Length=875 Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 92/343 (27%), Positives = 153/343 (45%), Gaps = 66/343 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 LI+ P+RELA QT +++ K N LIIGG + + + N ++I+V TPGR Sbjct 145 LIISPTRELAYQTFEVLRKVGK---NHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGR 200 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L + T + + ++ LVLDEAD +L G++D +N + +P K+ Q ++ SA Sbjct 201 LLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLP------KKRQTLLFSA 254 Query 409 TLHSFDVKKLSEKIMHFP--TWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSHI 464 T + VK L+ + P WV K + S P T+ +++V + K L+ L +SH+ Sbjct 255 T-QTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFL-RSHL 312 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + ++I+F + + L + Sbjct 313 KK-----------------------------------------KSIVFFSSCKEVQYLYR 331 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F + G S + LHG ++ R + F + L TD+AARG+D V Sbjct 332 VFCRLRPG-------VSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAV 384 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLA-ISLVATEKEKV 626 +V+ P++ Y+HR GR R + G A + L+ +EK V Sbjct 385 NWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMV 427 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/65 (42%), Positives = 43/65 (66%), Gaps = 0/65 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS+ + + + ++E + L T+IQ ++I L L G DVL AA+TGSGKT AF +PV Sbjct 68 ITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPV 127 Query 61 IQIVY 65 ++ +Y Sbjct 128 LEALY 132 >sp|Q4WM60|DBP4_ASPFU ATP-dependent RNA helicase dbp4 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp4 PE=3 SV=1 Length=787 Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 150/342 (44%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ +Y L+IGG + +++ L ++I+V TPG Sbjct 122 ALILSPTRELAIQIFEVLRKIGRY---HTFSAGLVIGGKSLKEEQERL-GRMNILVCTPG 177 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T + ++ LVLDEAD +L G+ ++ + +P K Q ++ S Sbjct 178 RMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLP------KERQTLLFS 231 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + V L+ + P +V + + P + H+V+ P+ K D LW S Sbjct 232 AT-QTKKVSDLARLSLQDPEYVAVHETASSATPSKLQQHYVITPLPQKLDILW-----SF 285 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IR++ + S+ + L VR + E Sbjct 286 IRSN----------------LKSKTMVFLSSGKQVRFV--------------------YE 309 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + LHG +K R + RF + L TDVAARG+D Sbjct 310 SFRHLQPGIP--------LMHLHGRQKQGGRLDIVTRFSQSKHCVLFSTDVAARGLDFPA 361 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI + P++ Y+HR+GR R ER G A+ + +E+ Sbjct 362 VDWVIQLDCPEDADTYIHRVGRTARYEREGRAVLFLDPSEEE 403 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 39/63 (62%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ + A + + TDIQ+ +I L G D+L AA+TGSGKT AF +PV++ Sbjct 48 SFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVLE 107 Query 63 IVY 65 +Y Sbjct 108 NLY 110 >sp|Q86B47|Y8611_DROME Probable ATP-dependent RNA helicase CG8611 OS=Drosophila melanogaster OX=7227 GN=CG8611 PE=1 SV=1 Length=975 Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 107/393 (27%), Positives = 174/393 (44%), Gaps = 71/393 (18%) Query 289 ALIVEPSRELAEQTLNNIKQFKK---YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AL++ P+REL QT I++ K +I L +GG + + + + L G++I++G Sbjct 405 ALVIVPTRELVMQTYELIQKLVKPYTWIVPGSL-----LGGESRKSEKARLRKGINILIG 459 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK----- 399 TPGRL D L+ T L++++FL+LDEAD LL GY + ++ I + ++ + Sbjct 460 TPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELP 519 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVD---------LKGED--------------- 435 +LQ ++ SATL S V++L+ + P ++D LK +D Sbjct 520 QLQRMLLSATLTS-QVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDD 578 Query 436 -------------SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 S+P+ + V V PK RL + S + +V A SP Sbjct 579 GLGEYQEDVTGVLSIPENLQLSYVVVPPKL-RL---VALSSLLAKEVDA---------SP 625 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG-PDKKGHQFS 541 + + +AI + V H M + R + D E+ G P +G +F Sbjct 626 KQF-KAIVFMSTTEMVNF--HHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQGLRF- 681 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 LHG ER+ F+ L+ TDV RGID+ + V+ T P ++VH Sbjct 682 -FKLHGSMTQTERQGVFRGFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVH 740 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 R+GR RA R G A+ + + + H+ R Sbjct 741 RVGRTARAGRKGRAVLFLTPSEAQFVRHLEKKR 773 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/67 (36%), Positives = 45/67 (67%), Gaps = 7/67 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLP----TDIQAESIPLILGGGDVLMAAETGSGKTGAFS 57 + S +G+ P AV+ ++ LL T +Q ++IP +L G DVL+ ++TGSGKT A++ Sbjct 327 SKISTLGLHP---HAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYA 383 Query 58 IPVIQIV 64 +P+++++ Sbjct 384 LPLVELL 390 >sp|Q76PD3|DBP6_SCHPO ATP-dependent RNA helicase dbp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp6 PE=2 SV=1 Length=604 Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 102/385 (26%), Positives = 161/385 (42%), Gaps = 99/385 (26%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-----ENGVDI 342 + +++ P+REL Q K F+ Y+ L+ G + R + L E +D+ Sbjct 207 RCVVIVPTRELTVQV---AKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNGDENECRIDV 263 Query 343 VVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI---------- 391 +V TPGRL D + + +L +R++V+DEAD LL Q + D+++ + +I Sbjct 264 LVSTPGRLVDHIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKS 323 Query 392 ----------PQVTSD---------GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 P D LQ +V SATL + D K++ +H P V ++ Sbjct 324 NILDLDQNISPTFLPDIDTLLPYRLPSPLQKLVFSATL-TRDPSKIASLKLHNPRLVLVQ 382 Query 433 GED----------------SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +D SVP T+ V V+ + L L +H+K+ T Sbjct 383 NKDMEVDDGGEIEDDAIVFSVPPTLQEYHVSVSSEKPILLYHL---------IHSKNLT- 432 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 + +K A A + H++ + I ++L Q Sbjct 433 ----------NILCFVKSNEA--AARLHRLLELI--------HESLNQ------------ 460 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 FSC ERK+ + RF GD+ L+C+D+ ARGID+ VIN P Sbjct 461 --SFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQNVINYDPPLSV 518 Query 597 QNYVHRIGRVGRAERMGLAISLVAT 621 ++YVHRIGR RA R G A +LV + Sbjct 519 RSYVHRIGRTARAGREGFAWTLVQS 543 Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 39/69 (57%), Gaps = 10/69 (14%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG----------GGDVLMAAETGSGKT 53 FS + + ++ + +++ + +QA +PL+L GGDV ++A TGSGKT Sbjct 128 FSSLNISSKLVERLQKQNITRGFAVQAAVLPLLLQDGRHGPMYSYGGDVCVSAATGSGKT 187 Query 54 GAFSIPVIQ 62 ++ IP++Q Sbjct 188 LSYVIPIVQ 196 >sp|Q1E9T9|DBP7_COCIM ATP-dependent RNA helicase DBP7 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP7 PE=3 SV=1 Length=769 Score = 98.2 bits (243), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 114/424 (27%), Positives = 175/424 (41%), Gaps = 110/424 (26%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+++ P+REL +Q L+ + + +I +IGG + + + L G++I+V Sbjct 245 AIVLAPTRELCKQISVVLDGLLRCAHWI-----VAGTVIGGEKKKSEKARLRKGLNILVA 299 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN---------RMHNQIPQVT 395 TPGRL D L +T L++S VR+LVLDE D L+ G+ + I R ++IP + Sbjct 300 TPGRLADHLENTKVLDVSNVRWLVLDEGDRLMDLGFEEEIQGIIKKLDERRRPSKIPDLP 359 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + + I+CSATL +V++L GE S+ + + Sbjct 360 A---KRTTILCSATL-KMNVQRL--------------GEISLKEAI-------------- 387 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK------------- 502 HI+ D D + G+ PE + A LK YAV A K Sbjct 388 -------HIKADPADEDDEQKDGSKQPEFSAPA--QLKQSYAVVAAKLRLVTLTALLKRT 438 Query 503 ---EHKMDQAIIFCRTKIDCDNLEQYFIQQGGG---PD----------------KKGHQF 540 + + +AIIF D + F ++ PD F Sbjct 439 FARKGSVMKAIIFVSCADSVDFHFEVFTRRESSEELPDADDENAPSSSNVHGSIATASAF 498 Query 541 SCVC-------LHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 S LHG H R L F K+ D LICTDVAARG+D+ V +VI Sbjct 499 SNPSNNVILHKLHGSLPQHVRTATLSAFAKQKDASVLICTDVAARGLDLPNVDFVIEYDP 558 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIW 652 +++HRIGR R R G A+ + E+ + + KG Y +E ++ Sbjct 559 AFCSDDHLHRIGRTARLGRDGRALIFLLPGNEEGYVDIL----KGSY----REGSSNSVT 610 Query 653 YNEM 656 NE+ Sbjct 611 RNEV 614 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query 4 FSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPVI 61 F+ +G+ P +A + +++ PT IQ SI +L D + A+TGSGKT A+ +P++ Sbjct 157 FTSLGLSPSLATHLLTKLNLKTPTAIQKSSITQLLKEECDAFVQAQTGSGKTLAYLLPIV 216 Query 62 QIVYETLKDQQEGKK 76 + + + +GKK Sbjct 217 ERLMR-ISSHNKGKK 230 >sp|P0CR06|DBP10_CRYNJ ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP10 PE=3 SV=1 Length=802 Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 95/356 (27%), Positives = 144/356 (40%), Gaps = 63/356 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPK--------------------LRELLIIGG 326 P+ALI+ PSRELA Q K + ++ K LR LIIGG Sbjct 100 PRALILCPSRELAVQIYTVGKDLARGMNKGKGKGKNKNEDEEDEEGKGKEGLRWALIIGG 159 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 Q + + DIV+ TPGR L+ ++L ++ ++ DEAD L G+ + Sbjct 160 EGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQTVIYDEADRLFEMGFDVQLQE 219 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + +++P Q ++ SATL S V + ++ + P V L E + + Sbjct 220 ILHRLPSTR------QNLLFSATLPS-SVAEFAKAGLVNPLLVRLDAEQKISPDLALKFF 272 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 V P E+ + +V K N +P P Sbjct 273 SVKP-----GEKEASLLVLLREVIGKPN-QPEPADPS---------------------SA 305 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 QAI+F TK D + + G + ++ R+Q L F+ Sbjct 306 PQAIVFVATKHHVDYVAELLRTTG---------YRTSLIYSSLDQVARQQQLAGFRSHQS 356 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 L+ TDVAARG+DI + +VIN P + +VHR+GR RA R G A SL+ E Sbjct 357 DVLVVTDVAARGLDIPIMDHVINYDFPAGPRIFVHRVGRTARAGRKGTAYSLIVKE 412 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 22/58 (38%), Positives = 34/58 (59%), Gaps = 2/58 (3%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPVIQ 62 + V P++ +++ + PT IQ +IP L D+L A TGSGKT A+ IP++Q Sbjct 32 LNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIPLLQ 89 >sp|P0CR07|DBP10_CRYNB ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP10 PE=3 SV=1 Length=802 Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 95/356 (27%), Positives = 144/356 (40%), Gaps = 63/356 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPK--------------------LRELLIIGG 326 P+ALI+ PSRELA Q K + ++ K LR LIIGG Sbjct 100 PRALILCPSRELAVQIYTVGKDLARGMNKGKGKGKNKNEDEEDEEGKGKEGLRWALIIGG 159 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 Q + + DIV+ TPGR L+ ++L ++ ++ DEAD L G+ + Sbjct 160 EGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQTVIYDEADRLFEMGFDVQLQE 219 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + +++P Q ++ SATL S V + ++ + P V L E + + Sbjct 220 ILHRLPSTR------QNLLFSATLPS-SVAEFAKAGLVNPLLVRLDAEQKISPDLALKFF 272 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 V P E+ + +V K N +P P Sbjct 273 SVKP-----GEKEASLLVLLREVIGKPN-QPEPADPS---------------------SA 305 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 QAI+F TK D + + G + ++ R+Q L F+ Sbjct 306 PQAIVFVATKHHVDYVAELLRTTG---------YRTSLIYSSLDQVARQQQLAGFRSHQS 356 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 L+ TDVAARG+DI + +VIN P + +VHR+GR RA R G A SL+ E Sbjct 357 DVLVVTDVAARGLDIPIMDHVINYDFPAGPRIFVHRVGRTARAGRKGTAYSLIVKE 412 Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust. Identities = 22/58 (38%), Positives = 34/58 (59%), Gaps = 2/58 (3%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPVIQ 62 + V P++ +++ + PT IQ +IP L D+L A TGSGKT A+ IP++Q Sbjct 32 LNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIPLLQ 89 >sp|Q0CMM5|DBP4_ASPTN ATP-dependent RNA helicase dbp4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp4 PE=3 SV=2 Length=804 Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 93/342 (27%), Positives = 150/342 (44%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ +Y L+IGG + +++ L ++I+V TPG Sbjct 121 ALILSPTRELAIQIFEVLRKVGRY---HHFSAGLVIGGKSLKEEQERL-GKMNILVCTPG 176 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T + ++ LVLDEAD ++ G+ ++ + +P K Q ++ S Sbjct 177 RMLQHLDQTALFDTYNLQMLVLDEADRIMDMGFQKTVDAIIGHLP------KERQTMLFS 230 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + V L+ + P +V + + P T+ H+VV P+ K D LW S Sbjct 231 AT-QTKKVSDLARLSLQDPEYVAVHEAAASATPSTLQQHYVVTPLPQKLDILW-----SF 284 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IR++ + S+ I L VR + E Sbjct 285 IRSN----------------LKSKTIVFLSSGKQVRFV--------------------YE 308 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + LHG +K R ++ + L TDVAARG+D Sbjct 309 AFRHLQPGIP--------LMHLHGRQKQGGRLDITTKYSQAKHAVLFSTDVAARGLDFPA 360 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI + P++ Y+HR+GR R ER G A+ + +E+ Sbjct 361 VDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEQ 402 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AF+++ + + + TDIQ+ ++ L G D+L AA+TGSGKT AF IPV++ Sbjct 47 AFTDLPLSEPTLSGLSASHYKTLTDIQSRAVSHALKGRDILGAAKTGSGKTLAFLIPVLE 106 Query 63 IVY 65 +Y Sbjct 107 NLY 109 >sp|Q5ZJF6|DDX10_CHICK Probable ATP-dependent RNA helicase DDX10 OS=Gallus gallus OX=9031 GN=DDX10 PE=2 SV=1 Length=875 Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 90/341 (26%), Positives = 158/341 (46%), Gaps = 65/341 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 LI+ P+RELA QT +++ K N LIIGG +++ + + +++++ TPGR Sbjct 149 LIISPTRELAFQTFKVLRKVGK---NHDFSAGLIIGGKDLKEESERIHH-INMLICTPGR 204 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L + T S ++ L+LDEAD +L G++D +N + +P K+ Q ++ SA Sbjct 205 LLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAIIENLP------KKRQTLLFSA 258 Query 409 TLHSFDVKKLSEKIMHFP--TWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSHI 464 T + VK L+ + P WV K + S P T+ +++V + K + L+ L +SH+ Sbjct 259 T-QTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYIVCELQHKINVLYSFL-RSHL 316 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + + ++ + K + +Y R +FC+ Sbjct 317 KKKSI--------------VFFASCKEV--QYLFR-----------VFCKL--------- 340 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Q G P + LHG ++ +R + F + L TD+AARG+D V Sbjct 341 ----QPGLP--------VLALHGKQQQMKRMEVYTCFVRKKAAVLFATDIAARGLDFPAV 388 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +VI P++ Y+HR+GR R + G A+ ++ +EK Sbjct 389 NWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEEK 429 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + + + ++E + + T+IQ ++I L L G DVL AA+TGSGKT AF +P +++ Sbjct 75 FSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPALEL 134 Query 64 VY 65 +Y Sbjct 135 LY 136 >sp|Q9JJY4|DDX20_MOUSE Probable ATP-dependent RNA helicase DDX20 OS=Mus musculus OX=10090 GN=Ddx20 PE=1 SV=2 Length=825 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 86/333 (26%), Positives = 147/333 (44%), Gaps = 60/333 (18%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 LI+ P+RE+A Q + I ++ L + IGG + L+ I VG+PGR Sbjct 135 LILAPTREIAVQIHSVITAIGIKMEG--LECHVFIGGTPLSQDKTRLKK-CHIAVGSPGR 191 Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQG-YSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 + L+ LN +R +LDEAD LL +G + + IN +++ +P Q++ SA Sbjct 192 IKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASK------QMLAVSA 245 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV----HHVVVPVNPKTDRLWERLGKSHI 464 T L+ + M PT+V L D P + ++ VV P +++E + H+ Sbjct 246 TYPEVLANALT-RYMRDPTFVRLNPSD--PSLIGLKQYYQVVNSYPLAHKIFEEKTQ-HL 301 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + E++S+ +QA++F +L Sbjct 302 Q-----------------ELFSKV----------------PFNQALVFSNLHSRAQHLAD 328 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 +G F C+ G+ ++R + + K+ R LI TD+ +RGID V Sbjct 329 ILSSKG---------FPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKV 379 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 V+N+ +P + + Y+HRIGR GR +GL ++ Sbjct 380 NLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVT 412 >sp|Q6BSM3|SPB4_DEBHA ATP-dependent rRNA helicase SPB4 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=SPB4 PE=3 SV=1 Length=614 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 87/340 (26%), Positives = 152/340 (45%), Gaps = 56/340 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIGGVAA-RDQLS-VLENGVDIVV 344 ++I+ P+RELA+Q + +YI D ++ L++G +++ R+ + L N I++ Sbjct 96 SIILSPTRELAKQIQTVFDKVLEYIPEDKATIKTQLLVGSLSSVREDIDYFLTNKTHILI 155 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D +S+ + + V VLDEAD LL + + ++ Q+P+ G Sbjct 156 ATPGRLLDFLSSNYVKTNSVEIAVLDEADKLLDISFERDVIKILKQLPKQRRTG------ 209 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ S D + + V VV N K + + Sbjct 210 LFSATISSAG---------------DTIFRTGMANPVKIVVKSKNSKN------AAPTSL 248 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +H + T+ A + IK+++ + I++ T C +++ Sbjct 249 NVSYMHVEPETKISA-----------------LIALIKDYRFQKCIVYFPT---CTSVKH 288 Query 525 YF-IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF----LICTDVAARGI 579 ++ + Q ++ ++ LHG R + L+ F +GD L+ TDVAARGI Sbjct 289 FYSVFQTLVNVEEEDRYKFFSLHGQLSTKPRLKTLQNFSEGDSMLHKHVLLTTDVAARGI 348 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 DI V VI + P + + HR GR GRA ++G AI ++ Sbjct 349 DIPDVDLVIQLDPPTDPDVFFHRSGRTGRANKVGQAIVML 388 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 0/74 (0%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKD 70 P I +A++ + + T +QA +IPL G DV++ A TGSGKT AF IPV+Q + L + Sbjct 19 PWIKEAIKSLGYPTMTPVQASTIPLFSGNKDVVVEAVTGSGKTLAFVIPVLQKLSNRLYN 78 Query 71 QQEGKKGKTTIKTG 84 E + +K G Sbjct 79 IDEEGENPEPVKKG 92 >sp|A3LWH3|DBP7_PICST ATP-dependent RNA helicase DBP7 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DPB7 PE=3 SV=2 Length=733 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 96/348 (28%), Positives = 157/348 (45%), Gaps = 36/348 (10%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+I+ P+RELA Q ++ + + + ++IGG + + + + GV+I+VGTPG Sbjct 224 AVILTPTRELATQIYGVLETLTRCYHH--IVPGIVIGGEKKKSEKARIRKGVNILVGTPG 281 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI---PQVTSDGKRLQ-- 402 RL D + +T L++SQ+R+L+LDE D L+ G+ + I ++ N I Q+ + Q Sbjct 282 RLADHMENTESLDISQLRWLILDEGDKLVELGFEETITKITNLITRNSQIMESMHKWQGL 341 Query 403 -----VIVCSATLHSFDVKKLSEKIMHFPTWVD-------LKGEDSVPDTVHHVVVPVNP 450 ++CSAT+ + +V+KL I++ P + E + PD + VV V P Sbjct 342 PVRRINLLCSATMQN-NVEKLGSIILNNPEMISDGSSSGKHSEEVTAPDQLIQNVVVVPP 400 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K + I +D ++TR S K+ K D++ Sbjct 401 KLRLVTLSAILKKISSDMSGTNNSTRTIVFFSCSDSVNFHFDVFTRGGNTFKKVKNDESG 460 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF---KKGDVR 567 +++ D I QG K LHG R L+ F K + Sbjct 461 KLETVEVENDT---PLIGQGTAVYK---------LHGSLSQQTRTSTLQAFIKDSKSNHS 508 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 L CTDVA+RG+D+ + VI P +++HRIGR R + G A Sbjct 509 ILFCTDVASRGLDLPNIASVIEYDPPFTIDDHLHRIGRSARVGKEGTA 556 Score = 37.0 bits (84), Expect = 0.76, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Query 2 AAFSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIP 59 + F +G+ +++ + E + + PT +Q IP +L D+ + A+TGSGKT +F +P Sbjct 144 STFEGLGINERLSKHLTETLRFKNPTKVQKSVIPTMLSTERDLFIKAQTGSGKTLSFLLP 203 Query 60 VIQ 62 + Sbjct 204 IFH 206 >sp|A5E3K3|DBP4_LODEL ATP-dependent RNA helicase DBP4 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP4 PE=3 SV=1 Length=775 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 153/343 (45%), Gaps = 67/343 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALIV P+RELA Q + + KY L+ GG + + + ++I+VGTPG Sbjct 123 ALIVSPTRELAVQIFEVLAKIGKY---NSFSAGLVTGGKDVQYEKERISR-MNILVGTPG 178 Query 349 RLDD-LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R+ L + + S ++ LVLDEAD L G+ I+ + N +P+ Q ++ S Sbjct 179 RISQHLNESVGMETSNLQVLVLDEADRCLDMGFRKQIDNILNHLPRTR------QTLLFS 232 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGE---DSVPDTV--HHVVVPVNPKTDRLWERLGKS 462 AT H+ V+ L+ + P + + ++P+++ ++V VP+N K D LW + KS Sbjct 233 AT-HTDSVQDLARLSLTNPKRIGTSSDQDISAIPESLDQYYVKVPLNEKLDVLWSFI-KS 290 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 H+++ KIL + F +K Sbjct 291 HLKS-----------------------KIL-----------------VFFSSSKQVQYAY 310 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 E + Q G P + L+G K R + +F + L TD+ ARG+D Sbjct 311 ETFRTLQPGIP--------LMKLYGRHKQTSRLETTVKFSQAQHACLFATDIVARGLDFP 362 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA-ISLVATEKE 624 + +VI V P++ YVHR+GR R R G + + L+ TE++ Sbjct 363 AIDWVIQVDCPEDVATYVHRVGRSARFGRQGKSLLMLLPTEED 405 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + + ++E ++ TDIQ +SIP+ L G D++ A TGSGKT AF IPVI+I Sbjct 50 FSDLPITQNTLRGLKECSFVSLTDIQKKSIPVALKGEDLMGTARTGSGKTLAFLIPVIEI 109 Query 64 V 64 + Sbjct 110 L 110 >sp|P0C218|DDX20_DANRE Probable ATP-dependent RNA helicase DDX20 OS=Danio rerio OX=7955 GN=ddx20 PE=3 SV=1 Length=761 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 86/338 (25%), Positives = 149/338 (44%), Gaps = 63/338 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L++ P+RE+A Q + ++ L + IGG L+ I +G+P Sbjct 96 QVLVLAPTREIAVQIHAVVMAIGSAMEG--LECHVFIGGRPISQDKQHLKK-CHIAIGSP 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLL----SQGYSDFINRMHNQIPQVTSDGKRLQV 403 GR+ L+ G L +S +R VLDEAD LL S + + IN +++ +P Q+ Sbjct 153 GRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLP------ANKQM 206 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV----HHVVVPVNPKTDRLWERL 459 + SAT ++LS + M PT+V L D P + ++ +VP + +++E Sbjct 207 LALSATYPESLAQQLS-RYMREPTFVRLNPTD--PGLLGLKQYYKIVPSHSLPHKVFEEK 263 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 +S + E++S+ +QA++F Sbjct 264 VQSLL------------------ELFSKI----------------PFNQALVFSNLHTRA 289 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 +L +G VC+ G +R + + + K+ R LI TD+ +RGI Sbjct 290 QHLADILSSKG---------LPAVCISGGLSQDQRLEAMWKLKQYQCRVLISTDLTSRGI 340 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 D V VIN+ +P + + Y+HRIGR GR +G+A++ Sbjct 341 DAEKVNLVINLDVPQDWETYMHRIGRAGRFGTLGVAVT 378 >sp|Q5APM7|MS116_CANAL ATP-dependent RNA helicase MSS116, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MSS116 PE=3 SV=2 Length=668 Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 104/395 (26%), Positives = 172/395 (44%), Gaps = 64/395 (16%) Query 289 ALIVEPSRELA---EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 +++ P+R+LA E+ + KY + P L LIIGG R + +IV+ Sbjct 160 TVVLVPTRDLAFQIEEEYRKLISHLKYNERPNLE--LIIGG--QRTSFNP-RRPAEIVIA 214 Query 346 TPGRLD-DLVSTGKLN--LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 TPGRL+ +L + KL S V + + DEAD LL G+ +N + + +V + K ++ Sbjct 215 TPGRLEKELQTDRKLAKCFSNVTYRIYDEADRLLDVGFESVLNEIDGLLYKVRTTPKPIK 274 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDL----KGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++ SAT+ + + S+K +H P + L K + +P+ +H ++ D++ Sbjct 275 SLLFSATVDE-AISEFSKKHIH-PEYEFLNTVTKDDLEIPENIHQQLIECTDGIDKVNVS 332 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 L + H +K+H + I+F TK Sbjct 333 LSELH-----------------------------------GIMKQHNDYKVIVFLPTKTA 357 Query 519 CDNLEQYFIQQGGGPDKKGHQFS----CVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 D +Y D+ FS LHG R +R L+ FK LI TDV Sbjct 358 VDWFYEYIT--NALDDELFELFSKPPRVFMLHGGRSVRQRSAALKGFKVAKKGILISTDV 415 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARGID+ V V+ + E +Y+H++GR GRA + G A SL AT E + + + Sbjct 416 AARGIDVKDVTNVMQMFPSVEIADYIHKVGRTGRAGKKGKA-SLFATPAELPYVSLLKRK 474 Query 635 GKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT 669 K + ++ + N ++ +IE L+ T Sbjct 475 RKVKFQEVIQSEK-----LNSSNIIDQIESPLDST 504 Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/55 (33%), Positives = 33/55 (60%), Gaps = 1/55 (2%) Query 13 IAQAVEEMDWLLPTDIQAES-IPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 I ++ + D+ T IQ +S +P+ ++ A+TG+GKT AF++P +Q Y+ Sbjct 98 IINSLHKNDFKELTPIQQKSLVPIFNTEKGLVCRAKTGTGKTLAFAVPTLQYAYK 152 >sp|Q54S03|DDX18_DICDI Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum OX=44689 GN=ddx18 PE=3 SV=1 Length=602 Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 88/339 (26%), Positives = 147/339 (43%), Gaps = 68/339 (20%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + ++ F P N +I+ P+RELA Q ++ KY ++IGG + + + Sbjct 181 LVKSNFKPRNGTGVIIISPTRELALQIYGVARELMKYHTQ---THGIVIGGASKKPEEER 237 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 LE GV+++V TPGR LD L +T ++ L++DEAD +L G+ + ++++ ++P+ Sbjct 238 LEKGVNLLVATPGRLLDHLQNTKGFITKNLKCLIIDEADRILEVGFEEEMHQIIKKVPKT 297 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVN 449 ++ + + T D+ K+S + + P +V + E + TV +VV P Sbjct 298 ----RQTMLFSATQTRKVDDIAKVS--LNNSPVYVGVDDEREI-STVEGLEQGYVVCPSE 350 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + L+ L K+ + + I L AV+ E Sbjct 351 RRFLLLYTFLKKN---------------------LSKKIIVFLSSCNAVKYTAE------ 383 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 ID LE LHG +K +R F + L Sbjct 384 ---LLNYIDIPVLE---------------------LHGRQKQQKRTNTFYEFVNAEKGIL 419 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ICTDVAARG+DI V ++I PD+ + Y+HR+GR R Sbjct 420 ICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTAR 458 Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + +++EEM + T IQA+SI +L G D+L AA TGSGKT AF IP I++ Sbjct 121 FSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEV 180 Query 64 VYET 67 + ++ Sbjct 181 LVKS 184 >sp|A7TFZ9|DBP6_VANPO ATP-dependent RNA helicase DBP6 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP6 PE=3 SV=1 Length=637 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 95/357 (27%), Positives = 165/357 (46%), Gaps = 60/357 (17%) Query 285 NAPKALIVEPSRELAEQ---TLNNIKQFKKYIDN-PKLRELLIIGGVAARDQLSVLENGV 340 N +AL++ P++ L Q T NN+ Q I + KL L + +L+N Sbjct 259 NKLRALVIVPTKLLINQVYETFNNLAQGTSLIVSISKLENSL------KEENKKLLQNEP 312 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 DI++ TPGRL D + +G +NL ++FLVLDEAD LL+Q + ++ N + N++ D Sbjct 313 DILITTPGRLVDHLQSGAVNLRNLKFLVLDEADRLLNQSFQNWCNELLNKLKTDKQDHMP 372 Query 401 LQVI--VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++ V SATL + + +KL + P V D+V +P R+ + Sbjct 373 GNIVKMVFSATLTT-NTEKLHGLQFYNPKLF-------VMDSVKLYHLP------RMLQE 418 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK-- 516 HI T AK + +P + +R + E + ++F ++ Sbjct 419 YN-LHIPT----AKTSYKPL-----------------FLLRLLSEINGSKMLVFVKSNES 456 Query 517 -IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD----VRFLIC 571 + +L I+ K G QF ++ + E ++ + F + V+ LI Sbjct 457 SLRLASLLSIMIEH-----KLGSQFDINSVNSNNTKAENRRIVNEFASNNNTSKVQVLIT 511 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 TDV +RG+DI+ + V+N +P Q Y+HR GR RA+ G A +++ + E+ ++ Sbjct 512 TDVMSRGVDINDITDVLNYDVPISSQQYIHRCGRTARAQSKGTAYNMLIGKGERTFW 568 Score = 40.4 bits (93), Expect = 0.062, Method: Compositional matrix adjust. Identities = 17/25 (68%), Positives = 22/25 (88%), Gaps = 0/25 (0%) Query 40 GDVLMAAETGSGKTGAFSIPVIQIV 64 GDVL+ A TGSGKT A+SIP++QI+ Sbjct 229 GDVLVNASTGSGKTLAYSIPILQIL 253 >sp|A5DGM4|SPB4_PICGU ATP-dependent rRNA helicase SPB4 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=SPB4 PE=3 SV=2 Length=601 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 93/344 (27%), Positives = 152/344 (44%), Gaps = 70/344 (20%) Query 290 LIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAA-RDQLSVL-ENGVDIVV 344 +++ P+RELA Q + + QF D P ++ LI+G +A R+ L+ EN I++ Sbjct 92 IVISPTRELANQINTVFHTLLQFYPE-DQPPIKTQLIVGSLATVREDLNAFAENKPQIII 150 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D S+ + S V +VLDEAD LL + + + + ++P+ G Sbjct 151 ATPGRLLDFFSSNAVKRSTVEMVVLDEADRLLDISFQNDVVSILKKLPKQRRTG------ 204 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGE--DSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SATL S + M P + + +S P ++ + VNP+T Sbjct 205 LFSATLSSAG-DSIFRTGMSNPVKISVNSNKAESKPQSLTVNYMMVNPET---------- 253 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 I +L + + + + I++ T C ++ Sbjct 254 -------------------------KIAVL-----INMLSTLQYKKCIVYFPT---CASV 280 Query 523 EQYFIQQGGGPDKKGHQFSCVCL---HGDRKPHERKQNLERFKKGDVR----FLICTDVA 575 + ++ +K H V L HG R + + +F +GDVR L+ TDVA Sbjct 281 KYFY-----SVFQKLHPLEDVNLTSIHGQLLAKARLKAMNKFTEGDVRTSKHVLLTTDVA 335 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 ARGIDI V VI + P + ++HR GR GRA ++G AI ++ Sbjct 336 ARGIDIPEVDLVIQLDPPTDPDMFLHRCGRTGRANKVGRAIVML 379 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 46/70 (66%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 A+S+ + P I A++ + + T +QA +IPL G DV++ A TGSGKT AF+IPV++ Sbjct 15 AWSQASLQPWIHDAIDSLGFRSMTPVQASTIPLFCGNKDVVVEAVTGSGKTLAFAIPVLE 74 Query 63 IVYETLKDQQ 72 V + +K+ + Sbjct 75 RVTKCMKENR 84 >sp|Q2UUN6|HAS1_ASPOR ATP-dependent RNA helicase has1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=has1 PE=3 SV=2 Length=596 Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 98/365 (27%), Positives = 163/365 (45%), Gaps = 66/365 (18%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N A+IV P+RELA Q +++ + + ++IGG R + Sbjct 181 LSALRFKPRNGTGAIIVSPTRELALQIFGQVREL---LAHHSQTYGIVIGGANRRAEAEK 237 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV+++V TPGR LD L +T +R L++DEAD +L G+ D + ++ +P Sbjct 238 LMKGVNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEADRILEVGFEDEMRQIAKILP-- 295 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 + Q ++ SAT + V+ L+ R Sbjct 296 ---SENRQTMLFSAT-QTTKVEDLA----------------------------------R 317 Query 455 LWERLGKSHIRTDDVHAKD-NTRPGANSPEMWSEAIK--ILKGEYAVRAIKEHKMDQAII 511 + R G +I D H K+ +T G + EA K +L + R +K+ + I+ Sbjct 318 ISLRPGPLYINVD--HRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLKK----KIIV 371 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F + C++++ Y G + LHG +K +R F LIC Sbjct 372 FLSS---CNSVKYY------GELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLIC 422 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY--H 629 TDVAARG+DI V ++I PD+ ++Y+HR+GR R G SL+ + +V + H Sbjct 423 TDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGSN-GKGRSLMFLQPSEVGFLKH 481 Query 630 VCSSR 634 + +R Sbjct 482 LKEAR 486 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 42/61 (69%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G+ + + +E M + T++Q +IP +L G DVL AA+TGSGKT +F IP I++ Sbjct 121 FTELGLSEKTMKGIEGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEM 180 Query 64 V 64 + Sbjct 181 L 181 >sp|Q761Z9|RH18_ORYSJ DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0164500 PE=1 SV=2 Length=647 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 99/360 (28%), Positives = 159/360 (44%), Gaps = 49/360 (14%) Query 284 PNAPK-----ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 P+ PK +I+ P+REL+ Q N + F + + +L++GG + +L LE Sbjct 89 PSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKG--VSSMLLVGGFDIKAELKKLEE 146 Query 339 -GVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 G +I+VGTPG+L D++ LN + L+LDEAD LL G+ I + +++P++ Sbjct 147 EGANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRR 206 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK-TDRL 455 G + SAT + VK+L++ + P V++K E V P D Sbjct 207 TG------LFSAT-QTEAVKELAKAGLRNPVRVEVKTE-------------VKPTGKDGA 246 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + LG S T G M EA K V + ++ + +++ T Sbjct 247 QQELGPS-----------KTPLGLRLEYMICEASN--KSSQLVDFLVQNNGKKIMVYFAT 293 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 C ++ + I KG + HG K R++ L F L+CTDVA Sbjct 294 ---CACVDYWAIVLPLLDSLKGS--PIIPYHGKMKQGPREKALASFSALSSGILVCTDVA 348 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 ARG+DI V ++ P + ++HR GR R ++ G AI + KE + RG Sbjct 349 ARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDAIVFLLP-KEDTYVEFLKRRG 407 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/63 (43%), Positives = 42/63 (67%), Gaps = 2/63 (3%) Query 4 FSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FSE+ + PE+ +A++ + T +QA +IPL+L DV + A TGSGKT AF +PV+ Sbjct 23 FSELSPALSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVV 82 Query 62 QIV 64 +I+ Sbjct 83 EIL 85 >sp|Q6FY67|MAK5_CANGA ATP-dependent RNA helicase MAK5 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=MAK5 PE=3 SV=1 Length=733 Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 87/355 (25%), Positives = 154/355 (43%), Gaps = 49/355 (14%) Query 290 LIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIGGVAARDQLSVL--ENGVDIVVG 345 +I P+RELA+Q +++ + NP + L + GG++ + Q +L + IVV Sbjct 229 IIFTPTRELAQQVTKHLQNVCSMLLKKNPYMI-LSLTGGLSIQKQERLLKYDGSARIVVA 287 Query 346 TPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL- 401 TPGR +L+ + +++ LVLDEAD LL G+ D ++ + ++ K + Sbjct 288 TPGRFLELIEKNEELMKRFAKIDVLVLDEADRLLQDGHFDEFEKILKHLGRIRKSLKNME 347 Query 402 --QVIVCSATLHSFDVKKLSEKIMHFPTWV---DLKGEDSVPDTVHHVVVPVNPKTDRLW 456 Q ++ SAT + KL+ +W + K E + + H++ +N K+ + Sbjct 348 YWQTLIYSATFSTDLFDKLAN-----SSWKKKNNSKDESEMESVLKHLMTKINFKSKPMM 402 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 + A + A E E + + Y + + +IFC + Sbjct 403 ------------IDANPEDKISAQIKESLIECAPLERDLYCYYFVTLYP-GTTLIFCNSI 449 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK--------GDVRF 568 L Y I G + +H R +NLE+F+ G Sbjct 450 ESVKKLNAYLINLG---------INSFQIHSSMTQKNRLKNLEKFEAMASKNNHLGKPTV 500 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 LI +DVAARG+DI G+ +V++ LP Y+HR GR R + G+A+ + + ++ Sbjct 501 LIASDVAARGLDIKGIKHVVHYHLPHSADTYIHRSGRTARGDNEGVAVMICSPQE 555 Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 25/37 (68%), Gaps = 0/37 (0%) Query 26 TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 T IQ SIP L G D++ A TGSGKT A+ IP+I+ Sbjct 179 TPIQKLSIPAALEGKDIMGKASTGSGKTLAYGIPIIE 215 >sp|A7F8V8|DBP7_SCLS1 ATP-dependent RNA helicase dbp7 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp7 PE=3 SV=1 Length=877 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 100/375 (27%), Positives = 173/375 (46%), Gaps = 40/375 (11%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+I+ P+REL +Q +++ + P + + GG + + + + L GV+I+V TPG Sbjct 337 AIILSPTRELCKQIAAVLEKVLRCA--PWIVGTTVNGGESKQSEKARLRKGVNILVATPG 394 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI---------PQVTSDG 398 RL D L +T LN++ VR+LVLDE D L+ G+ + I + +I ++ S Sbjct 395 RLADHLDNTEVLNVATVRWLVLDEGDRLMELGFEEEIKGIVEKIGRRSVASGSSEMMSLP 454 Query 399 KRLQVIVCSATLHSFDVKKLSE-------KIMHFPTWVD-------LKGED---SVPDTV 441 KR I+CSAT+ +V++L E I P+ + ++ +D S P + Sbjct 455 KRRVTILCSATM-KMNVQRLGEISLKDAVHIQADPSEQEKQDKANGIEADDKAFSAPTQL 513 Query 442 --HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + +VP + L L ++ R V A+S + + ++ E + Sbjct 514 KQSYAIVPAKLRLVTLTALLKRAFARKGSVMKAIVFMSCADSVD-FHFSLFSRSAEKSAE 572 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 A +E K+D + L + I G + LHG + R L+ Sbjct 573 ASEEGKVDPPT------LPKSELIKETITHGATISNNSNPVILHKLHGSLAQNIRTATLK 626 Query 560 RF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + + D LICTDVA+RG+D+ V +VI P ++++HR+GR RA R G A+ Sbjct 627 AYSESADPCVLICTDVASRGLDLPNVDFVIEYDPPFSAEDHLHRVGRTARAGREGRALIF 686 Query 619 VATEKEKVWYHVCSS 633 + E+ + + +S Sbjct 687 LMPGTEEEYVSILAS 701 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query 1 MAAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSI 58 MA F+ +G+ +A + ++D PT IQ S+ LI D + AETGSGKT A+ + Sbjct 254 MATFTNLGLSRRLAAHLSTKLDMKAPTAIQKASVTQLISDDSDAFIQAETGSGKTLAYLL 313 Query 59 PVIQIV 64 P+++ + Sbjct 314 PIVERI 319 >sp|Q80Y44|DDX10_MOUSE Probable ATP-dependent RNA helicase DDX10 OS=Mus musculus OX=10090 GN=Ddx10 PE=1 SV=2 Length=875 Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 88/341 (26%), Positives = 153/341 (45%), Gaps = 65/341 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 LI+ P+RELA QT +++ K N LIIGG + + + N ++I+V TPGR Sbjct 145 LIISPTRELAYQTFEVLRKVGK---NHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGR 200 Query 350 L-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 L + T + + ++ LVLDEAD +L G++D +N + +P K+ Q ++ SA Sbjct 201 LLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLP------KKRQTLLFSA 254 Query 409 TLHSFDVKKLSEKIMHFP--TWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSHI 464 T + VK L+ + P WV K + S P T+ ++++ ++ K L+ L +SH+ Sbjct 255 T-QTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSFL-RSHL 312 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + ++I+F + + L + Sbjct 313 KK-----------------------------------------KSIVFFSSCKEVQYLYR 331 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F + G S + LHG ++ R + F + L TD+AARG+D V Sbjct 332 VFCRLRPG-------ISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAV 384 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +V+ P++ Y+HR GR R + G A+ ++ +E+ Sbjct 385 NWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEQ 425 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/65 (42%), Positives = 43/65 (66%), Gaps = 0/65 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS+ + + + ++E + L T+IQ ++I L L G DVL AA+TGSGKT AF +PV Sbjct 68 ITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPV 127 Query 61 IQIVY 65 ++ +Y Sbjct 128 LEALY 132 >sp|Q6CXW0|DBP8_KLULA ATP-dependent RNA helicase DBP8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP8 PE=3 SV=1 Length=435 Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 92/347 (27%), Positives = 152/347 (44%), Gaps = 58/347 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P +++ P+RELA Q +QF + +R +++GG + Q L+ + Sbjct 70 PQGMFGIVLTPTRELAMQIA---EQFTAFGSAMNIRVAIVVGGESIVQQAIELQKRPHFI 126 Query 344 VGTPGRLDD-LVSTGKLN---LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 + TPGRL ++++G+ L +V+FLVLDEAD LL++ +S + + +P K Sbjct 127 IATPGRLAHHVLNSGEDTIGGLKRVKFLVLDEADILLTETFSKDLATCVSILP---PKNK 183 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 R Q ++ +AT+ VK LS+ P+T+ Sbjct 184 R-QNLLFTATMTD-QVKALSDA----------------------------PQTE------ 207 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA--IIFCRTKI 517 GK + T +V + DN + + +K Y + + K ++ IIF + Sbjct 208 GKPPVFTFEVESVDNVAIPKTLETTYLLVPEHVKESYLYQILTSEKYVKSSCIIFVNRTV 267 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + L + K LH ER +++RF+ R LI TDVA+R Sbjct 268 TAEILRRTL---------KSLDVRVTSLHSQMPQQERTNSVQRFRAQAARVLIATDVASR 318 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 G+DI V V+N +P ++HR GR RA R G ++ V TEK+ Sbjct 319 GLDIPIVELVVNYDIPGNPDTFIHRAGRTARAGRHGESLCFV-TEKD 364 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 33/58 (57%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F +G + +A+ M + PT IQ IP IL G D + A TGSGKT AF+ P++ Sbjct 6 FKSLGCSKWLVEALNAMKIVQPTAIQKACIPEILKGRDCIGGANTGSGKTIAFAAPML 63 >sp|Q9VVK8|DDX52_DROME Probable ATP-dependent RNA helicase DDX52 OS=Drosophila melanogaster OX=7227 GN=ais PE=1 SV=1 Length=594 Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 88/338 (26%), Positives = 146/338 (43%), Gaps = 57/338 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV-LENGVDIVVGT 346 +AL++ P+RELA+Q + + LR I A+ + + DI+V T Sbjct 190 RALVLAPTRELAQQIYRECAELTRETG---LRTHFISKVSEAKQKHGAECKQRYDILVST 246 Query 347 PGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 P R+ L+ L+LS V + VLDEAD L+ +G ++F ++ + ++ K V Sbjct 247 PNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEGQNNFKEQLDDIYAACSNPTK--CVA 304 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SAT ++ V K + + + + + ++S +TV ++ V + +L Sbjct 305 FFSAT-YTVPVAKWALRHLKNLVRITIGVQNSATETVQQELLFVGSEGGKL--------- 354 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 V +D R G P ++F ++K L + Sbjct 355 ----VAIRDLVRQGLQPP--------------------------VLVFVQSKERAKQLFE 384 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G D +H +R H+R ++ F++G + LICT++ RGID GV Sbjct 385 ELLYDGINVD---------VIHAERSQHQRDNCVKAFREGSIWVLICTELMGRGIDFKGV 435 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 VIN P +Y+HRIGR GRA R G AI+ E Sbjct 436 NLVINYDFPPTTISYIHRIGRTGRAGRPGRAITFFTQE 473 Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust. Identities = 19/53 (36%), Positives = 33/53 (62%), Gaps = 0/53 (0%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++P + Q + ++ PT IQ +++P++L ++ A TGSGKT AF P+I Sbjct 126 MLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPII 178 >sp|Q0D622|RH32_ORYSJ DEAD-box ATP-dependent RNA helicase 32 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0517000 PE=2 SV=2 Length=773 Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/353 (24%), Positives = 156/353 (44%), Gaps = 66/353 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 +++ P+++LA Q N F+K I+G D+ + N ++I+V TPGR Sbjct 156 IVLSPNKDLAGQIFN---VFQKVGKLHGFSAACIVGNRKGLDEEKAVINNMNILVCTPGR 212 Query 350 L-DDLVSTGKLNLSQVR-FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 L + T + SQ++ LV+DEAD +L + + + ++ + +Q+P+V Q ++ S Sbjct 213 LLQHMGETTNFDCSQIQQILVIDEADQVLDKNFQEQVDNVVSQLPKVR------QTLLFS 266 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGE--DSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + VK L+ + P ++ + E + PDT+ + ++VP+ K + LW Sbjct 267 AT-QTKSVKDLARVSLKDPEYISVHEEATTATPDTLEQYAMIVPLEQKLNMLWS------ 319 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IK H + ++F + + Sbjct 320 ------------------------------------FIKRHLKSRILVFLSSVKQVKFVY 343 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + F + G S C+HG K ++ + FK+G L TD+ ARG+DI Sbjct 344 EVFKKLRPG-------ISLRCMHGRMKYEVQQAIVAEFKEGH-SVLFSTDIFARGLDIED 395 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 V +V+ V P+ Y+HR+GR R + G A+ + E+EK+ + ++ K Sbjct 396 VDWVVQVDCPENIALYIHRVGRTARYNKRGKALIFLCPEEEKMLEKLKAAESK 448 Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 39/64 (61%), Gaps = 0/64 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F E+ + + + + + ++IQ ++P L G DVL AA+TGSGKT AF IPV+ Sbjct 80 ARFDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVL 139 Query 62 QIVY 65 + +Y Sbjct 140 EKLY 143 >sp|A3LSJ2|DBP6_PICST ATP-dependent RNA helicase DBP6 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP6 PE=3 SV=2 Length=591 Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 91/366 (25%), Positives = 160/366 (44%), Gaps = 61/366 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV------- 340 +A+++ P++ L Q Q + + + V+ R+ +S+ E G+ Sbjct 235 RAIVLVPTKPLINQVKATFVQLSRGTN---------LSVVSLRNDVSIKEEGIKIVNSPP 285 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD----FINRMHNQIPQVTS 396 DI+V TPGRL + +S +NL+ ++FLV+DEAD LL+Q + + I+ + + Sbjct 286 DIIVSTPGRLVEHISNKSINLNSLQFLVIDEADRLLNQSFQNWCQVLISSLEGDVNIAEE 345 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 Q ++ SATL + D KLS P V + + + + +V ++ T + Sbjct 346 WKITPQKLIFSATLTT-DSGKLSALKFQKPRLVIVNDRKQLVNEIFNVPSSLSEYTIQFG 404 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 AK + +P ++ +Y ++ +K+ +IF ++ Sbjct 405 T-------------AKASIKP-------------LILAKYL---LENNKLSNVLIFTKSN 435 Query 517 ID----CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 C LE F G + + + K R + L+ F + L+ T Sbjct 436 EASIRLCKLLELMF-----GKLHPSMNIAYIN-STNNKSAIRTKILKDFSTQKINILVAT 489 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY-HVC 631 D+ ARGIDI + VIN LP+ + YVHR+GR RA + G A +L + E W+ + Sbjct 490 DLIARGIDILSITDVINYDLPNSSREYVHRVGRTARANQTGHAYTLCFGKGEAKWFKKII 549 Query 632 SSRGKG 637 S G+G Sbjct 550 SDVGRG 555 Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 11/73 (15%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG-----------GDVLMAAETGSGK 52 FSE + P + + +E ++ +Q + ++L GD+L+ A TGSGK Sbjct 155 FSEFEISPFLLKNLERDNFTTAFSVQIAIMDILLHDIKRNRLEPDVKGDILVNAATGSGK 214 Query 53 TGAFSIPVIQIVY 65 T A+SIP+I+ ++ Sbjct 215 TLAYSIPIIEALH 227 >sp|Q93ZG7|RH38_ARATH DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana OX=3702 GN=RH38 PE=1 SV=2 Length=496 Score = 94.7 bits (234), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 101/408 (25%), Positives = 171/408 (42%), Gaps = 93/408 (23%) Query 242 FGEEEFKFPPKDGFVALS---KAPDGYIVKSQHSGNAQVT------QTKFLPN--APKAL 290 + E +F+ P K ++L P +++ H+G+ + T ++ P P+AL Sbjct 107 YVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQAL 166 Query 291 IVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII----GGVAARDQLSVLENGVDIVVGT 346 + P+RELA Q + +++ K+ EL + G AA V +V+GT Sbjct 167 CICPTRELANQNMEVLQKMGKFTG--ITAELAVPDSTRGAPAATRGAPV---SAHVVIGT 221 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 PG L ++ +L L+ ++ LV DEAD +L + G+ D ++ I +V + QV++ Sbjct 222 PGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPN---FQVLL 278 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 SAT + VK + + P + +K ED D+V + VV P Sbjct 279 FSATFNE-TVKDFVARTVKDPNQLFVKREDLALDSVKQYKVVCP---------------- 321 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD-----QAIIFCRTKID 518 K + + IK+ M+ Q IIF +TK Sbjct 322 -----------------------------KEQNKIEVIKDQIMELGDIGQTIIFVKTKAS 352 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 + + + G + +HG+ +R + ++ FK+ + LI TDV ARG Sbjct 353 AQKVHKALAEMG---------YDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARG 403 Query 579 IDIHGVPYVINVTLPDEKQN-------YVHRIGRVGRAERMGLAISLV 619 D V V+N LP + + Y+HR+GR GR R G +L+ Sbjct 404 FDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLL 451 Score = 37.4 bits (85), Expect = 0.51, Method: Compositional matrix adjust. Identities = 23/72 (32%), Positives = 41/72 (57%), Gaps = 3/72 (4%) Query 4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPV 60 F ++ + PE+ + + EM + P+ IQA S+P+I+ ++ A GSGKT F + + Sbjct 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGM 152 Query 61 IQIVYETLKDQQ 72 + V TL++ Q Sbjct 153 LSRVDPTLREPQ 164 >sp|A3LX02|SPB4_PICST ATP-dependent rRNA helicase SPB4 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=SPB4 PE=3 SV=2 Length=617 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 91/367 (25%), Positives = 157/367 (43%), Gaps = 71/367 (19%) Query 269 SQHSGNA--QVTQTKFLPNAPKALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLI 323 SQ G A +V Q L A+++ P+RELA Q NN+ ++ P +LL+ Sbjct 79 SQEEGEAPEKVKQGHML-----AIVLSPTRELASQIQSVFNNVIEYLPEDKIPIKTQLLV 133 Query 324 IGGVAARDQLS-VLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 RD L L++ I++ TPGR+ D +S+ + ++ V +LDEAD LL + Sbjct 134 GSLSTVRDDLDRFLKDKPHILIATPGRMLDFMSSQYVKMNSVEIAILDEADKLLDFSFEK 193 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE----DSVP 438 + + ++P+ G + SAT+ + + M+ P V +K + +S P Sbjct 194 DVVNILKRLPKQRRTG------LFSATISAAG-NTIFRAGMNNPVKVAVKSKSTTANSAP 246 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 +H + + P+ K + Sbjct 247 SALHISYLMIEPEK----------------------------------------KITTLI 266 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYF--IQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 + + +++ + I++ T C +++ ++ Q+ + F LHG R + Sbjct 267 KLLHDYRYKKCIVYFPT---CTSVKHFYSIFQKIVNGNDNTESFKFYSLHGQLATKPRLR 323 Query 557 NLERFKKGDV----RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 L+ F GDV L+ TDVAARGIDI V VI + P + ++HR GR GRA ++ Sbjct 324 TLQSFTDGDVALNKHILMTTDVAARGIDIPDVDLVIQLDPPTDPDVFLHRCGRTGRANKV 383 Query 613 GLAISLV 619 G AI ++ Sbjct 384 GRAIVML 390 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 46/76 (61%), Gaps = 0/76 (0%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + P I +A+ + + T +QA +IPL+ G DV++ A TGSGKT AF+IPV+Q V L Sbjct 17 LQPWIKEAIASLGFPTMTPVQAATIPLLSGNKDVVVEAVTGSGKTLAFAIPVLQKVSNRL 76 Query 69 KDQQEGKKGKTTIKTG 84 D QE + +K G Sbjct 77 YDSQEEGEAPEKVKQG 92 >sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 OS=Bos taurus OX=9913 GN=DDX52 PE=2 SV=1 Length=596 Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 90/355 (25%), Positives = 150/355 (42%), Gaps = 58/355 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI-IGGVAARDQLSVLENGVDIVVGT 346 +ALI+ P+RELA Q ++ K + R +I VAA+ DI+V T Sbjct 234 RALIISPTRELASQIH---RELVKLSEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTT 290 Query 347 PGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 P RL L+ ++L+ V +LV+DE+D L G + F +++ + TS +++ Sbjct 291 PNRLIYLLKQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTS--HKVKRA 348 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT ++DV++ + V + +S +TV ++ V +T +L Sbjct 349 MFSATF-AYDVEQWCRLNLDSVITVSVGARNSAVETVEQELLFVGSETGKL--------- 398 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + ++ + G N P ++F ++ L Sbjct 399 ----LAMRELVKKGFNPP--------------------------VLVFVQSIERAKELFH 428 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 I +G D +H DR +R + F+ G + LICT + ARGID GV Sbjct 429 ELIYEGINVD---------VIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGV 479 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS-RGKGC 638 VIN P Y+HRIGR GRA G A++ + + + V + + GC Sbjct 480 NLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGC 534 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 0/56 (0%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 E + + Q + + + PT IQ ++IP++L G ++L +A TGSGKT AFSIP++ Sbjct 167 EYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPIL 222 >sp|Q6FU81|MS116_CANGA ATP-dependent RNA helicase MSS116, mitochondrial OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=MSS116 PE=3 SV=1 Length=666 Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 97/366 (27%), Positives = 161/366 (44%), Gaps = 64/366 (17%) Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE---LLIIGG 326 QH N ++ N K++IV P+R+LA Q + ++ K + N KL+ + ++GG Sbjct 221 QHLLNTKIDSQ----NKVKSVIVAPTRDLALQIEDEVR--KIHSKNRKLKAFECVSLVGG 274 Query 327 VAARDQLSVLEN-GVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDEADGLLSQGYSD-- 382 + +E IV+GTPGRL D++ G V F VLDEAD LL G+ + Sbjct 275 TNFDRSIRYIEKVSPSIVIGTPGRLIDVMEKFGNKFFKDVDFKVLDEADRLLEIGFKEDL 334 Query 383 -FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP--TWVDL--KGEDSV 437 +IN+M N + T+ + ++ ++ SATL V+ LS IM+ ++D + E Sbjct 335 SYINKMLNTLN--TNSTEHIRTLLFSATL-DHKVQSLSNDIMNKEECLYIDTIDENEPQA 391 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + + +V D L+ + HIR G +P Sbjct 392 HEKIDQTLVVGETFADNLYAAI--EHIR----------EFGTKTPNY------------- 426 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 ++I+F T F + K+ + HG +R + Sbjct 427 ----------KSILFLPT--------VKFTKFMATILKRQVKLPIYEFHGQIDQKKRTRI 468 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 + FK L+CTDV ARG+D + V+ + LP E NY+HRIGR R+ + G +++ Sbjct 469 VNEFKTMKKGLLVCTDVGARGMDFPNITEVLQIGLPSEIPNYIHRIGRTARSGKEGSSVT 528 Query 618 LVATEK 623 ++ E+ Sbjct 529 FISKEE 534 Score = 36.6 bits (83), Expect = 0.90, Method: Compositional matrix adjust. Identities = 21/68 (31%), Positives = 37/68 (54%), Gaps = 2/68 (3%) Query 12 EIAQAVEEMDWLLPTDIQAESI-PLILGG-GDVLMAAETGSGKTGAFSIPVIQIVYETLK 69 ++ ++ M + T +Q ++I P+I D++ A+TG+GKT AF +P+ Q + T Sbjct 169 DLYDSISRMGFEQLTPVQQKTIEPIITNSDSDIIARAKTGTGKTFAFLLPIFQHLLNTKI 228 Query 70 DQQEGKKG 77 D Q K Sbjct 229 DSQNKVKS 236 >sp|Q8JHJ2|DDX55_DANRE ATP-dependent RNA helicase DDX55 OS=Danio rerio OX=7955 GN=ddx55 PE=2 SV=2 Length=593 Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 90/343 (26%), Positives = 151/343 (44%), Gaps = 57/343 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTP 347 ALI+ P+RELA Q + +F + P+ ++L+IGG + + L+ G +I++ TP Sbjct 85 ALIITPTRELAMQISEVMGRFLQGF--PQFTQILLIGGSNPIEDVEKLKTQGANIIIATP 142 Query 348 GRLDDLVSTGK--LNLS----QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 GRL+D+ L+L+ + LVLDEAD LL G+ +N + +P+ G Sbjct 143 GRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYLPKQRRTG--- 199 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT + +++KL + P + +K + +V ++ Sbjct 200 ---LFSAT-QTQELEKLVRAGLRNPVRITVKEKGVAASSVQKTPAKLS------------ 243 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 N + E ++ + L+ +HK ++ ++F T C Sbjct 244 ------------NYYTMCRAEEKFNTLVAFLR---------QHKHEKQLVFFST---CAC 279 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 +E YF G + S C+HG K H+R + F+ L+CTDV ARGIDI Sbjct 280 VE-YF---GKALEVLVKNVSIHCIHGKMK-HKRNKIFADFRALKSGILVCTDVMARGIDI 334 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V +V+ P ++VHR GR R G A+ + +E Sbjct 335 PEVNWVLQYDPPSSASSFVHRCGRTARIGNQGNALVFLLPMEE 377 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/65 (42%), Positives = 37/65 (57%), Gaps = 3/65 (5%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY---ETLK 69 I Q ++E+ + T +Q+ IPL + DV A TGSGKT AF IP ++I+ E LK Sbjct 20 ILQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKLK 79 Query 70 DQQEG 74 Q G Sbjct 80 KMQVG 84 >sp|O61305|DDX19_DROME DEAD-box helicase Dbp80 OS=Drosophila melanogaster OX=7227 GN=Dbp80 PE=1 SV=1 Length=460 Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 106/391 (27%), Positives = 167/391 (43%), Gaps = 80/391 (20%) Query 258 LSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 L+ P I +SQ SG A +++ N P+ L + P+ ELA QT + Sbjct 108 LADPPQNMIAQSQ-SGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARM 166 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL-NLSQVRFLV 368 ++ KLR + G + E+ I++GTPG+L D +L ++ ++ V Sbjct 167 GQFCREIKLR--FAVRGEEVDRSKKIEEH---ILIGTPGKLLDWGIKFRLFDMKKISVFV 221 Query 369 LDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 LDEAD ++ +QG+ D R+H + Q++ SAT + +V + I+ PT Sbjct 222 LDEADVMIATQGHHDQCIRIHKML------NPHCQMLFFSAT-YGKEVMDFARLIVADPT 274 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + L E+ E + + +++ + K N Sbjct 275 IIRLMREEES------------------LENIKQYYVKCKNEEGKYN------------- 303 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 AI+ + G +V QAIIFC TK L G S L G Sbjct 304 AIQNIYGCISV--------GQAIIFCHTKRTAAWLAAKMTSDG---------HSVAVLTG 346 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------DEKQNYVH 601 D +R L+RF+ G + LI T++ +RGIDI + V+N LP + + Y+H Sbjct 347 DLTVVQRLDVLDRFRSGLEKVLITTNILSRGIDIEQLQVVVNFDLPVDLDGMADCETYLH 406 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 RIGR GR + G+AI+L+ EK VCS Sbjct 407 RIGRTGRFGKSGIAINLITDEKT---MKVCS 434 >sp|A5DTK7|MS116_LODEL ATP-dependent RNA helicase MSS116, mitochondrial OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=MSS116 PE=3 SV=1 Length=692 Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 102/402 (25%), Positives = 176/402 (44%), Gaps = 63/402 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL-LIIGGVAARDQLSVLENGVDIVVGTP 347 +I+ P+R+LA Q + ++ + I + + +IGG+ ++ + N +IV+ TP Sbjct 209 TVIIVPTRDLALQIYDEYQKVLRGISGSRKPHISYVIGGM--KNSFNP-RNPSEIVIATP 265 Query 348 GRLD-DLVSTGKLN-LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD-GKRLQVI 404 GRL+ DL S + + +++ V DEAD LL G+ ++ + I + SD + L+ + Sbjct 266 GRLEADLRSPLFASAFTDIKYRVYDEADRLLDVGFEPTLDSIDRSIKMIRSDDAEPLKSL 325 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS--VPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ + + + I +++ ED V + +H V+ D+ Sbjct 326 LFSATVDARLDQFAKQHINKKYDYINTVPEDDPEVHENIHQVMYKCKDAIDKFGSFFNYV 385 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + D SP+M + ++F T+ + L Sbjct 386 NQLVKD------------SPDM-----------------------KMMVFLPTQTAVEFL 410 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Y + K LHG R +R++ L FK+ D LI TDVAARGID+ Sbjct 411 YSYMSE---ACHKHDVDIDIFHLHGKRSASQRQRALSNFKRDDSGILITTDVAARGIDVK 467 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 GV +V+ + E +YVH++GR GRA + G A+ L T+ E Y R Sbjct 468 GVTHVVQLFPSSEIADYVHKVGRTGRAGKEGKAV-LFITQPEM------------AYVRR 514 Query 643 LKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 L + G T + ++ SEI+ ++ + PD +V D F Sbjct 515 LNSERGVT--FEQVHESSEIDNSIDF-FEGMRPDEQVANDFF 553 >sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 OS=Homo sapiens OX=9606 GN=DDX52 PE=1 SV=4 Length=599 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/348 (25%), Positives = 148/348 (43%), Gaps = 57/348 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI-IGGVAARDQLSVLENGVDIVVGT 346 +ALI+ P+RELA Q ++ K + R +I VAA+ DI+V T Sbjct 236 RALIISPTRELASQIH---RELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTT 292 Query 347 PGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 P RL L+ ++L+ V +LV+DE+D L G + F +++ + TS +++ Sbjct 293 PNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSH--KVRRA 350 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT ++DV++ + + V + +S +TV ++ V +T +L Sbjct 351 MFSATF-AYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKL--------- 400 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + ++ + G N P ++F ++ L Sbjct 401 ----LAVRELVKKGFNPP--------------------------VLVFVQSIERAKELFH 430 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 I +G D +H +R +R + F+ G + LICT + ARGID GV Sbjct 431 ELIYEGINVD---------VIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGV 481 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 VIN P Y+HRIGR GRA G AI+ + + + V + Sbjct 482 NLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVAN 529 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 38/56 (68%), Gaps = 0/56 (0%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 E + + Q + + + +PT IQ ++IP++L G ++L +A TGSGKT AFSIP++ Sbjct 169 EYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPIL 224 >sp|A7TJ71|DBP4_VANPO ATP-dependent RNA helicase DBP4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP4 PE=3 SV=1 Length=768 Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 88/347 (25%), Positives = 156/347 (45%), Gaps = 49/347 (14%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q + K + L+IGG + ++ + + ++I++GTPG Sbjct 116 ALIISPTRELAMQIYEVLL---KIGTSTSFSAGLVIGGKDVKFEMERI-SKINILIGTPG 171 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L + LN S ++ LVLDEAD L G+ ++ + + +P Q ++ S Sbjct 172 RILQHMDQAIGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLPPTR------QTLLFS 225 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT S ++ L+ + + + D + + V+ P P+T L +S+I Sbjct 226 AT-QSQSLEDLAR--LSLTDYKTIGNPDILNPSNGKVLGPSTPET------LQQSYI--- 273 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 +V D K + IK H + I+F + + + F Sbjct 274 NVELPD-------------------KLDMLYSFIKSHLKSKMIVFLSSSKQVHFVYETFR 314 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G S + LHG +K R + L++F + L TDV ARGID + +V Sbjct 315 KMQPG-------ISLMHLHGRQKQKARTETLDKFNRAQHVCLFATDVVARGIDFPAIDWV 367 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 + V P++ Y+HR+GR R + G ++ ++ ++E+ + +SR Sbjct 368 VQVDCPEDVDTYIHRVGRCARYGKQGKSMIMLTPQEEEGFLKRLASR 414 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/62 (44%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + + +L TDIQ +SIP+ L G D+L AA+TGSGKT AF IPV++ Sbjct 43 FKDLPISNSTLKGLNDSAFLKLTDIQRDSIPMSLKGYDILGAAKTGSGKTLAFLIPVLEK 102 Query 64 VY 65 +Y Sbjct 103 LY 104 >sp|Q9VHU1|DDX55_DROME Probable ATP-dependent RNA helicase DDX55 homolog OS=Drosophila melanogaster OX=7227 GN=CG9630 PE=2 SV=1 Length=613 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 92/348 (26%), Positives = 150/348 (43%), Gaps = 64/348 (18%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 +T + P AL++ P+RELA Q + QF ++ D L + LI+GG + + ++ L Sbjct 75 ETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIATLRR 134 Query 339 GVD-IVVGTPGRLDDLVST--GKLNL-SQVR---FLVLDEADGLLSQGYSDFINRMHNQI 391 I+V TPGRL+DL LNL +QV+ FLVLDEAD LL G+ +N + + Sbjct 135 ETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYL 194 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P+ G + SAT + +V L + P V +K + SV Sbjct 195 PRQRRTG------LFSAT-QTTEVTDLIRAGLRNPVLVSVKEKASV-------------- 233 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 N+P +I++ E A+ E A + Sbjct 234 ----------------------------NTPARLQNFYRIVEPELKFVALLEFLSSPATV 265 Query 512 FCRTKI---DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 + + C +E + K+ + + +HG K ++R +E+F+ Sbjct 266 IGKVMVFFPTCACVEYWAEALPPLLPKR----TVLGIHGKMK-NKRANVVEKFRNTPQAV 320 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 L+CTDV ARG+D+ + +V+ P ++VHR+GR R G A+ Sbjct 321 LLCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNAL 368 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/64 (38%), Positives = 36/64 (56%), Gaps = 0/64 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 + Q V+ + T +Q +IPL+L DV A TGSGKT AF +P+++I+ K+ Sbjct 18 VLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRHKETP 77 Query 73 EGKK 76 G K Sbjct 78 WGPK 81 >sp|A5DLF4|DBP4_PICGU ATP-dependent RNA helicase DBP4 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP4 PE=3 SV=2 Length=754 Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 92/343 (27%), Positives = 153/343 (45%), Gaps = 66/343 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALIV P+RELA QT + + KY L+ GG + + + + ++I++GTPG Sbjct 121 ALIVSPTRELAVQTFEVLTKIGKY---NSFSAGLVTGGKDVKYEKERI-SRMNILIGTPG 176 Query 349 RLDD-LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R+ L + S ++ LVLDEAD L G+ I+ + +P VT Q ++ S Sbjct 177 RISQHLNEAVGMETSNLQVLVLDEADRCLDMGFRKQIDNILGHLP-VTR-----QTLLFS 230 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGE---DSVPDTV--HHVVVPVNPKTDRLWERLGKS 462 AT S +VK L+ + P V + + S+P+++ +++ + + K D LW L KS Sbjct 231 AT-QSDNVKDLARLSLVNPKRVGVSSDQEVSSIPESLEQYYIKISLASKMDVLWSFL-KS 288 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 H+++ KIL + F +K Sbjct 289 HLKS-----------------------KIL-----------------VFFSSSKQVQFAY 308 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 E + Q G S + L+G K R + +F + L TD+ ARG+D Sbjct 309 EAFRRLQPG--------ISLLKLYGRHKQTSRLETTMKFSRAQHACLFATDIVARGLDFP 360 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +V+ V P++ YVHR+GR R R G ++ ++A +E+ Sbjct 361 AIDWVVQVDCPEDAATYVHRVGRAARFGRQGKSLLMLAPSEEE 403 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 0/44 (0%) Query 19 EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 E +++ TDIQ ++IP+ L DV+ A TGSGKT AF +PVI+ Sbjct 63 ENNFVSLTDIQKKAIPVALKSEDVMGTARTGSGKTLAFLVPVIE 106 >sp|Q9CWT6|DDX28_MOUSE Probable ATP-dependent RNA helicase DDX28 OS=Mus musculus OX=10090 GN=Ddx28 PE=2 SV=2 Length=540 Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 93/354 (26%), Positives = 157/354 (44%), Gaps = 71/354 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA-ARDQLSVLEN-GVDI 342 AP+ L++ PSRELAEQ + Y+ L+ + + GG+ +R +L + D+ Sbjct 202 TAPRGLVLVPSRELAEQVQAVAQSLGGYLG---LQVIELGGGLGMSRLKLQLYRRPAADV 258 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK--- 399 +V TPG L + + ++L + F+VLDE D LL + + + ++ + + P S + Sbjct 259 LVATPGALWKALKSQLISLQHLNFIVLDEVDTLLDESFLELVDYILEKSPIAESPAELED 318 Query 400 ----RLQVIVCSATLHSFDVKKLSEKIMHFPTWVD-LKGEDSVPDTVH-------HVVVP 447 + Q+++ AT FP ++ L + + PD++ H ++P Sbjct 319 PFNPKAQLVLVGAT---------------FPEGLNQLLSKVTSPDSLTTITSSKLHCLMP 363 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 H+R + K GA+ +E ++ILK + +A K Sbjct 364 ---------------HVRQTFMRLK-----GADK---VTELVQILKQQD--KASKTEPSG 398 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 ++FC + + L Y + H+ + L G R + F+KG Sbjct 399 TVLVFCNSASTVNWLG-YILDD--------HKIQHLRLQGQMPASMRAGIFQSFQKGSQN 449 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR--AERMGLAISLV 619 L+CTD+A+RG+D V VIN P Q+Y+HR GRVGR +E G IS V Sbjct 450 ILVCTDIASRGLDSVHVEVVINYDFPPTLQDYIHRAGRVGRVGSEVPGSVISFV 503 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 43/62 (69%), Gaps = 2/62 (3%) Query 3 AFSEMGVMPEIAQAVEEM--DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +F ++G+ P + A++E + + PT +Q+++IP +L G +L AAETGSGKT ++ +P+ Sbjct 127 SFVDLGLEPRVLLALQEAVPEVVQPTSVQSKTIPPLLRGRHLLCAAETGSGKTLSYLLPL 186 Query 61 IQ 62 Q Sbjct 187 FQ 188 >sp|Q6CDN5|DBP6_YARLI ATP-dependent RNA helicase DBP6 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP6 PE=3 SV=1 Length=607 Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 99/396 (25%), Positives = 166/396 (42%), Gaps = 73/396 (18%) Query 255 FVALSKAPDGYIVKSQHSGNA--------QVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 +A + PD + S SG + + + +P +A++V P++ L Q + + Sbjct 228 LLAPDRKPDLLVSASTGSGKTATYGIPIIEKLRDRIVPRI-RAVVVLPTKPLVMQVRDVL 286 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 + K L + + + + + +VLE DIVV PGRL + V S + F Sbjct 287 ENLSK---GSSLSVVALRNDRSTKRERAVLETA-DIVVAAPGRLVEQVKENPELFSYIEF 342 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK---------RLQVIVCSATLHSFDVKK 417 LV+DEAD LL Q Y D+ + + N Q GK +Q ++ SATL + + + Sbjct 343 LVVDEADRLLGQDYYDWASVLQNN-QQRAQAGKTNLTEHYVRNMQTLIFSATLTA-NPEH 400 Query 418 LSEKIMHFPTWVDLKGEDS--VPDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKD 473 ++ +H P + DS +P ++ +V V+ K L E L + I V K Sbjct 401 IASMDIHNPGVFVIGSSDSYSIPKSLTEIVTHVSAAEKPLMLCELLVQRDINRGVVFTKS 460 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 + E A R + ++ A IF + Sbjct 461 S--------------------ETAARVARMMEIMDADIFHK------------------- 481 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP 593 + + + R++++++F G + FL+CTD+ +RGID V VIN +P Sbjct 482 -----DWKIAAVSAETSSVHRRRSMKQFIDGKIDFLVCTDLVSRGIDF-VVDNVINYDIP 535 Query 594 DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 K+ YVHR+GR RA R G A + + E W+ Sbjct 536 SGKREYVHRVGRTARAGREGNAYTFLTGSGEAKWFR 571 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 21/80 (26%), Positives = 39/80 (49%), Gaps = 13/80 (16%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG---------DVLMAAETGSG 51 + +F E + + + ++ + + +Q IP +L D+L++A TGSG Sbjct 187 VGSFDEFDLSKNMMKNLDTLGYTKAFSVQKAVIPWLLAQQKLLAPDRKPDLLVSASTGSG 246 Query 52 KTGAFSIPVIQIVYETLKDQ 71 KT + IP+I E L+D+ Sbjct 247 KTATYGIPII----EKLRDR 262 >sp|P75172|Y623_MYCPN Probable ATP-dependent RNA helicase MG425 homolog OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=MPN_623 PE=3 SV=1 Length=450 Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 86/343 (25%), Positives = 143/343 (42%), Gaps = 59/343 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + L+V P+RELAEQ F K+ L+ + +IGG+ QL LEN +IVVGT Sbjct 75 QTLVVAPTRELAEQIKTTFINFAKHTH---LKVVSLIGGIPIWQQLKQLENQPEIVVGTM 131 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR+ DL+ G + + L++DE D +L +G+ + + ++I + Q+ V S Sbjct 132 GRVMDLLERGVIKFEHLEHLIIDEVDLMLDRGFKRKLFDLLSRIEKFE------QIAVYS 185 Query 408 ATLH--SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 A+ + + + K K F +LK PD N D+ L + Sbjct 186 ASYNEETIETAKQITKNGIFLAAPELKQNAPEPD---------NKLIDQFVCYLFSNR-- 234 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 K + + + + I+FC TK D L + Sbjct 235 ---------------------------KKQALYSLVSQTRAKSIIVFCDTKKLVDELCIF 267 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF-LICTDVAARGIDIHGV 584 + + LHGD+ R++NL+ F L+ TD+ RGI + GV Sbjct 268 L---------RKNDVKTYPLHGDKAQFIRERNLKLFANTTAPIVLVTTDLIGRGIHVEGV 318 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 V+N + + Y+HR+GR GR G I+ + +++ + Sbjct 319 DMVVNYSACVNFETYLHRMGRTGRNNHKGSCITFCTSHEKQAF 361 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/65 (34%), Positives = 40/65 (62%), Gaps = 0/65 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+E+GV P + +++ + PT IQ +IP L ++++ + TG+GKT F IPVI Sbjct 3 STFNELGVSPALIATLKDNNINQPTTIQQLAIPQFLQHQNLIVHSPTGTGKTAVFGIPVI 62 Query 62 QIVYE 66 + + + Sbjct 63 ETLLK 67 >sp|A5DID7|HAS1_PICGU ATP-dependent RNA helicase HAS1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=HAS1 PE=3 SV=2 Length=569 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/330 (27%), Positives = 146/330 (44%), Gaps = 57/330 (17%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 KF P N ++V P+RELA Q + + ++IGG R + L G Sbjct 171 KFKPRNGTGVIVVSPTRELALQIFGVARDLMAHHSQTLG---IVIGGANRRQEADKLMKG 227 Query 340 VDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 V++++ TPGRL D L +T ++ LV+DEAD +L G+ D + ++ +P SD Sbjct 228 VNLLIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMKQIIKVLP---SDE 284 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++ + + T D+ ++S + P ++++ VP+T Sbjct 285 RQSMLFSATQTTKVEDLARIS--LRAGPLYINV-----VPET------------------ 319 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 +V D G + + S+ +L + R IK+ + I+F + Sbjct 320 ---------EVSTADGLEQGYVTCD--SDMRFLLLFSFLRRNIKK----KIIVFLSS--- 361 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 C N +YF + D + LHG +K +R F LICTDVAARG Sbjct 362 C-NCVKYFGELLNYID-----LPVLDLHGKQKQQKRTNTFFEFCNAKQGILICTDVAARG 415 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +DI V ++I PD+ ++Y+HR+GR R Sbjct 416 LDIPAVDWIIQFDPPDDPRDYIHRVGRTAR 445 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/62 (44%), Positives = 43/62 (69%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++G+ +A+++M + T +Q ++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 107 FEDLGLSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 166 Query 64 VY 65 +Y Sbjct 167 LY 168 >sp|Q6BZR4|DBP9_YARLI ATP-dependent RNA helicase DBP9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP9 PE=3 SV=1 Length=544 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 96/357 (27%), Positives = 146/357 (41%), Gaps = 84/357 (24%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALIV P+REL EQ I + ++ P L+ L + + S+LE I+VGTP Sbjct 85 ALIVVPTRELCEQVSKVITKLTQFC--PHLKSLNVTQQLGDDVISSLLEEKPSIIVGTPS 142 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 RL L +++ S+V +LV+DEAD LLS GY + + + +P+ + SA Sbjct 143 RL--LKYAKEMDCSKVGYLVIDEADLLLSYGYKEDLIELSEMLPKTK------HTFIMSA 194 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 TL N ++D + ++ +S + + Sbjct 195 TL--------------------------------------NKESDLMKQQFCRSTVASVA 216 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 V A + R SE K L Y + ++ K + I+F C L + F++ Sbjct 217 VTAAEEERKLLQYYVKCSERDKFLLA-YVMFKLQLVK-GKTIVFVNEIDRCYRL-RLFLE 273 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA------------- 575 Q G +CV L+ + R +E+F KG LICTD A Sbjct 274 QFGIK-------ACV-LNSELPIASRLHIVEQFNKGVFNLLICTDEANKLAEASKSASKQ 325 Query 576 ------------ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 RG+D V +V+N LP + YVHR+GR RA + G A+S V Sbjct 326 TKEVSRAHEYSSTRGLDFMNVAFVLNFDLPLSSRAYVHRVGRTARANKAGTALSFVV 382 Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPVI 61 +F G+ + + D PT IQ +IPL L G D+ A TGSGKT A+ +P+ Sbjct 10 SFDSFGLDDRLLSGLAACDMKQPTLIQNTTIPLALDKGVDITAKAVTGSGKTVAYLLPIF 69 Query 62 QIVYETLKDQQEGKKGKTTIKT 83 +++ K++++ + + T Sbjct 70 ELMLRAEKEKRDIQTALIVVPT 91 >sp|A4R8B5|HAS1_PYRO7 ATP-dependent RNA helicase HAS1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=HAS1 PE=3 SV=2 Length=587 Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 85/331 (26%), Positives = 137/331 (41%), Gaps = 61/331 (18%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 KF P N ++V P+RELA Q + K+ ++IGG R + L G Sbjct 178 KFKPRNGTGVIVVSPTRELALQIFGVARDLMKHHSQTYG---IVIGGANRRAEAEKLSKG 234 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V++++ TPGRL D + +R LV+DEAD +L G+ D + QI ++ + Sbjct 235 VNLLIATPGRLLDHLQNTPFVFKNLRSLVIDEADRILEIGFEDEMR----QIIKILPKER 290 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH--HVVVPVNPKTDRLWE 457 + + + T D+ ++S + VD + E S + + +VV + + L+ Sbjct 291 QSMLFSATQTTKVEDLARVSLRPGPLYLNVDEEKEYSTVEGLEQGYVVCEADKRFILLFS 350 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L K + V NS + ++E + I Sbjct 351 FLQKMKKKKIIVFFS-----SCNSVKYYAELLNY-------------------------I 380 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 DC L+ LHG +K +R F D LICTDVAAR Sbjct 381 DCQVLD---------------------LHGKQKQQKRTNTFFEFCNADRGTLICTDVAAR 419 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 G+DI V +++ PD+ ++Y+HR+GR R Sbjct 420 GLDIPAVDWIVQFDPPDDPRDYIHRVGRTAR 450 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AFSE+ + +A+EEM + T+IQ IP +L G DVL AA+TGSGKT AF IP ++ Sbjct 113 AFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVE 172 Query 63 IV 64 ++ Sbjct 173 ML 174 >sp|Q0C9E8|MRH4_ASPTN ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=mrh4 PE=3 SV=2 Length=631 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 100/372 (27%), Positives = 154/372 (41%), Gaps = 63/372 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+ +I+ P+ EL Q +K I K R +I + R + L N G+DI+V Sbjct 273 PRVIILVPTAELVAQVGAKVKTLSHTI---KYRSGMISSNLTPRRIKNTLFNPDGIDILV 329 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD LL + + + + + G ++I Sbjct 330 TTPHLLASIAKTEPYVLSRVSHLVLDEADSLLDRSFQPITTEIIEK-----TSGSLQKLI 384 Query 405 VCSAT----LHSF------DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 +CSAT L +F D+++L+ +H ++P V VV + R Sbjct 385 LCSATIPRSLDNFLRKKYPDIQRLTTPNLH-----------AIPRRVQLGVVDIQKDPYR 433 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L + + A D+ G + KIL V + + D+ F R Sbjct 434 GNRNLACADVIWSIGKAGDSEPAGPFASYQGPSVKKIL-----VFVNEREEADEVAQFLR 488 Query 515 TK-IDCDNLEQ------------YFIQQGGGPD--------KKGHQFSCVCLHGDRKPHE 553 +K ID +L + F + G P KKG Q + KPHE Sbjct 489 SKGIDAHSLSRDSSARRQEEILAEFTEAGAPPSSEEIMLAQKKGRQDDAIPFEAPSKPHE 548 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 K + + L+ TD+A+RGID V VI +P +++HR+GR+GR + G Sbjct 549 P------HKLPNTKVLVTTDIASRGIDTLAVKTVILYHVPHTTIDFIHRLGRLGRMNKRG 602 Query 614 LAISLVATEKEK 625 I LV + K Sbjct 603 RGIVLVGKKDRK 614 Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 43/88 (49%), Gaps = 22/88 (25%) Query 1 MAAFSEMGVMPEI-----AQAVEEMDWLLPTDIQAESIPLILGGGD-------------- 41 + +F + ++P + +QA+ + + PT IQ +IP +L + Sbjct 142 ITSFDQFPLLPVVRHSIFSQALPGLHDVTPTPIQRVAIPRLLDDTNKDKKPKKRAEGEPE 201 Query 42 ---VLMAAETGSGKTGAFSIPVIQIVYE 66 L+AAETGSGKT A+ IP++ V + Sbjct 202 YDQYLLAAETGSGKTLAYLIPLVNTVKQ 229 >sp|Q54Q94|DDX10_DICDI Probable ATP-dependent RNA helicase ddx10 OS=Dictyostelium discoideum OX=44689 GN=ddx10 PE=3 SV=1 Length=878 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 88/342 (26%), Positives = 147/342 (43%), Gaps = 66/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+RELA Q + +K KY LIIGG + + + N ++I++ TPG Sbjct 216 AIVLSPTRELAIQIFDVLKAVGKY---HTFSAGLIIGGRNVQQEKDKI-NAMNILIATPG 271 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL + T + S ++ LVLDEAD +L G+S +N + +P + Q ++ S Sbjct 272 RLLQHMDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIVENLP------RERQTLLFS 325 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHV--VVPVNPKTDRLWERLGKSH 463 AT + ++ L+ + P ++ + +D + P + V+P+ K + L+ Sbjct 326 AT-QTKSIRDLARLSLQEPEYISVYEKDITTTPQNLTQTLCVIPLEMKLNMLFS------ 378 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IK H + I+F + Sbjct 379 ------------------------------------FIKTHLTSKIIVFFASCKQVRFAH 402 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + F G + LHG K R + E F K L TD+AARG+D Sbjct 403 ETFKLLNPGT-------TLFPLHGKMKQWTRLEVFEDFCKKKAGTLFATDIAARGLDFPA 455 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS-LVATEKE 624 V +VI V PD+ + Y+HR+GR R + G +I+ L+ +EK+ Sbjct 456 VEWVIQVDCPDDIETYIHRVGRTARNDAPGQSITILLPSEKD 497 Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 40/62 (65%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + +A+ E +L TDIQ S+P L G D+L AA+TGSGKT +F +P+++ Sbjct 143 FKDLPISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFILPILET 202 Query 64 VY 65 ++ Sbjct 203 LW 204 >sp|Q2H2J1|DBP4_CHAGB ATP-dependent RNA helicase DBP4 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP4 PE=3 SV=1 Length=825 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/370 (25%), Positives = 153/370 (41%), Gaps = 58/370 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ + N L+IGG + +++ L ++I+V TPG Sbjct 128 ALIISPTRELAVQIFEVLRKIGR---NHFFSAGLVIGGKSLKEEAERL-GRMNILVCTPG 183 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T +++ ++ LVLDEAD ++ G+ ++ + +P Q ++ S Sbjct 184 RMLQHLDQTANFDVNNLQILVLDEADRIMDMGFQSAVDALVEHLPTTR------QTLLFS 237 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT S V L+ + P +V + H V P L +S+I T Sbjct 238 AT-QSKRVSDLARLSLKEPEYV----------SAHEAAVSATPTN------LQQSYIVTP 280 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 + K +T G + S+ I VR + E + Sbjct 281 -LAEKLDTLFGFLRTNLKSKIIVFFSSGKQVRFV--------------------FESFKR 319 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 Q G P + LHG +K R + RF L TDV ARG+D V +V Sbjct 320 MQPGIP--------LLHLHGRQKQVARMEITSRFSSAKYGCLFATDVVARGVDFPAVDWV 371 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDG 647 + P++ Y+HR+GR R E G A+ + +E + + ++E+ Sbjct 372 VQADCPEDADTYIHRVGRTARYESKGRAVLFLEPSEEAGFLKRLEQKKVPLQKVNVRENK 431 Query 648 GCTIWYNEMQ 657 +I NE+Q Sbjct 432 KKSI-KNELQ 440 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 40/62 (65%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + A + + + TD+Q +IPL L G D+L AA+TGSGKT AF +PV++ Sbjct 55 FTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEK 114 Query 64 VY 65 +Y Sbjct 115 LY 116 >sp|Q2NL08|DDX55_BOVIN ATP-dependent RNA helicase DDX55 OS=Bos taurus OX=9913 GN=DDX55 PE=2 SV=1 Length=601 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 95/353 (27%), Positives = 151/353 (43%), Gaps = 57/353 (16%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV-AARDQLSVLE 337 + KF + A+I+ P+RELA Q + F K P+ ++L IGG D E Sbjct 75 EEKFKKSQVGAIIITPTRELAVQIEEVLSHFTKPF--PQFSQILWIGGRNPGEDVARFKE 132 Query 338 NGVDIVVGTPGRLDDLVSTGK--LNLSQ----VRFLVLDEADGLLSQGYSDFINRMHNQI 391 G +I+V TPGRL+D+ L+L+ + LVLDEAD LL G+ IN + + Sbjct 133 LGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFL 192 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P+ G + SAT + +V+ L + P + +K + + Sbjct 193 PKQRRTG------LFSAT-QTQEVENLVRAGLRNPVRISVKEKGVAASS----------- 234 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 T + RL +N + E +++ + L+ HK ++ ++ Sbjct 235 TQKTPSRL-------------ENHYMVCKADEKFNQLVHFLRN---------HKQEKHLV 272 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T C +E Y G + +C+HG K ++R + F+K L+C Sbjct 273 FFST---CACVEYY----GKALETLVKGVKIMCIHGKMK-YKRNKIFMEFRKLQSGILVC 324 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 TDV ARGIDI V +V+ P +VHR GR R G A+ + +E Sbjct 325 TDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEE 377 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/69 (35%), Positives = 41/69 (59%), Gaps = 3/69 (4%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKD 70 P++ + E+ + T +Q+ +IPL + DV A TGSGKT AF IP+ +I+ L+ Sbjct 18 PKVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIEEIL---LRR 74 Query 71 QQEGKKGKT 79 +++ KK + Sbjct 75 EEKFKKSQV 83 >sp|A7EAY2|MAK5_SCLS1 ATP-dependent RNA helicase mak5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=mak5 PE=3 SV=1 Length=780 Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 103/351 (29%), Positives = 151/351 (43%), Gaps = 45/351 (13%) Query 287 PKALIVEPSRELAEQTLNNIKQF-KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 P ALI+ P+RELA Q +I K +P + + GG++ + Q L DI++G Sbjct 294 PTALILSPTRELAHQLTEHITTLCKGMPTSPYV--AAVTGGLSVQKQQRQLSKA-DIIIG 350 Query 346 TPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGY-------SDFINRMHNQIPQVT 395 TPGRL +++S+ L QVRFLV+DEAD LL+ G+ + ++R H Sbjct 351 TPGRLWEVISSSNELSAGLKQVRFLVIDEADRLLTDGHFKEAEEILNALDRTHGNEDDDE 410 Query 396 SDG-KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 D Q +V SAT H K L +K+ KG+ S D + + Sbjct 411 EDTLPPRQTLVFSATFH----KGLQQKLAG-------KGKQSFKDDSQSM--------EY 451 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L ++L + V ++ AN E E K Y + H + +IF Sbjct 452 LLKKLNFREEKPKFVDVNPISQMAANLKEGMVECGGEEKDLYLYSLLLHHPNQRTLIFTN 511 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV--RFLICT 572 + L P + LH R +++E+F + + L+ T Sbjct 512 SIHSVRRLT---------PMLQTLNIPAHSLHSQMIQKARMRSIEKFSRTNNTGSVLVAT 562 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 DVAARG+DI GV VI+ LP YVHR GR RA G +I L E+ Sbjct 563 DVAARGLDIGGVQLVIHYHLPRTADMYVHRSGRTARAAASGSSILLCGPEE 613 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/89 (35%), Positives = 51/89 (57%), Gaps = 0/89 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ + E+ + A+ +M + PT IQ+E+IP +L G DV+ A TGSGKT AF IP+ Sbjct 212 VSGWVELDLSSNTLMALSKMGFSKPTPIQSEAIPEVLAGHDVVGKASTGSGKTLAFGIPI 271 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLN 89 ++ E + E + K+T A +L+ Sbjct 272 VEKWLEVYGELDEDELKKSTRPPTALILS 300 >sp|Q4WRP2|MS116_ASPFU ATP-dependent RNA helicase mss116, mitochondrial OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=mss116 PE=3 SV=1 Length=655 Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 152/334 (46%), Gaps = 45/334 (13%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGT 346 +A+I+ P+RELAEQ ++ + + +GG R+ L ++ G +++GT Sbjct 169 RAIIISPTRELAEQIAVEARRLAAH---SGVIVQTAVGGTQKREGLRRIQREGCHVLIGT 225 Query 347 PGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 PGRL D++S + + LVLDEAD LL G+SD I + +P + Q + Sbjct 226 PGRLKDVLSDSYNGVTAPNLSTLVLDEADRLLDDGFSDAIIDIQRLLPDPMKVDR--QTL 283 Query 405 VCSATLHSFDVKKLSEKIM--HFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ +V ++ K M +F +V +D VP H+ VP R +E Sbjct 284 MFSATVPR-EVMQMVRKTMKPNF-KFVKTVRDDEVPT---HLTVPQKYVILRGYENA--- 335 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 P + K ++GE + + +AI++ + + + + Sbjct 336 ------------------MPALLEFVTKYVEGE---KENPNQRPFKAIVYFNSTVQTNLV 374 Query 523 EQYF---IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + F ++Q P ++ + +H R ++ + F+ L +DV ARG+ Sbjct 375 YETFRNIVEQRHHPLRRVRVYE---IHSQLTQARRTRSSDFFRAAKSAILFSSDVTARGM 431 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 D V +VI V++P ++ Y+HR+GR RA + G Sbjct 432 DFPDVTHVIQVSIPRDRATYIHRLGRTARANKTG 465 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 42/61 (69%), Gaps = 2/61 (3%) Query 4 FSEMGVM-PEIAQA-VEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +E G++ P+I +A V++M+ TD+Q++++ IL G DVL A+TG+GKT AF PV Sbjct 85 LAERGLVDPKIIRAIVKDMNIKTMTDVQSQTLREILQGDDVLAQAKTGTGKTLAFLTPVF 144 Query 62 Q 62 Q Sbjct 145 Q 145 >sp|Q59S50|DBP7_CANAL ATP-dependent RNA helicase DBP7 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP7 PE=3 SV=1 Length=727 Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 103/368 (28%), Positives = 158/368 (43%), Gaps = 77/368 (21%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+I+ P+RELA Q L + + +I ++IGG + + + L G +I+V Sbjct 215 AIILTPTRELATQIYGVLETLTRCHHWI-----VPGIVIGGEKKKSEKARLRKGCNILVA 269 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI---PQVTSDGKRL 401 TPGRL D L +T L++SQ+R+LVLDE D L+ G+ D I ++ +I ++ ++ Sbjct 270 TPGRLADHLENTKTLDISQLRWLVLDEGDKLMELGFEDTIAQITAKIDSNSKIADTAEKW 329 Query 402 Q-------VIVCSATLHSFDVKKLSEKIMHFPTWVDLK----------------GEDSVP 438 Q ++CSATLHS +VKKL ++ P + ++ + P Sbjct 330 QGLPSRRINMLCSATLHS-NVKKLGSIVLKDPEMISVETASVAGTVSFDETIATTTSTAP 388 Query 439 DTVHHVVVPVNPK-----TDRLWERLGK-SHIRTD---------DVHAKDNTRPGANSPE 483 D + VV V PK D L ++ K S RT D H TR G + Sbjct 389 DQLIQNVVVVPPKLRLVTLDALLLKISKHSAERTIVFFSCSDSVDFHFDVFTRDGKKFKK 448 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 + E GE + + + ++ DN Y Sbjct 449 VTDEET----GEVKTVLVSPEDDENDGLLTAPQL-SDNTIIY------------------ 485 Query 544 CLHGDRKPHERKQNLERFKKGDVRF---LICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 LHG R L+ F K + + L CTDVA+RG+D+ V VI P +++ Sbjct 486 KLHGSLSQQTRASTLQSFVKDNNSYNKILFCTDVASRGLDLPNVANVIEYDPPFTIDDHL 545 Query 601 HRIGRVGR 608 HRIGR R Sbjct 546 HRIGRSAR 553 Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%) Query 4 FSEMGVMPEIA-QAVEEMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIPVI 61 FS +G+ +++ + + ++ PT IQ IP LI D+ + A+TGSGKT AF +P+ Sbjct 137 FSGLGLNEKLSIHLTDHLRFMHPTKIQQLVIPSLISTENDLFVKAQTGSGKTLAFVLPIF 196 Query 62 Q 62 Sbjct 197 H 197 >sp|A1CTZ2|DBP4_ASPCL ATP-dependent RNA helicase dbp4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp4 PE=3 SV=1 Length=823 Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 91/342 (27%), Positives = 147/342 (43%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ +Y L+IGG + R++ L ++I+V TPG Sbjct 124 ALILSPTRELAIQIFEVLRKIGRY---HTFSAGLVIGGKSLREEQERL-GRMNILVCTPG 179 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L T + ++ LVLDEAD +L G+ ++ + +P K Q ++ S Sbjct 180 RMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIVGHLP------KERQTLLFS 233 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + V L+ + P +V + + P + H+V+ P+ K D LW S Sbjct 234 AT-QTKKVSDLARLSLRDPEYVAVHETASTATPAKLQQHYVIAPLPQKLDILW-----SF 287 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 IR++ + S+ + VR + E Sbjct 288 IRSN----------------LKSKTMVFFSSGKQVRFV--------------------YE 311 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + LHG +K R + F + L TDVAARG+D Sbjct 312 SFRHMQPGIP--------LMHLHGRQKQGGRLDIMTNFSQAKHCVLFSTDVAARGLDFPA 363 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI + P++ Y+HR+GR R R G A+ + +E+ Sbjct 364 VDWVIQMDCPEDADTYIHRVGRTARYGRDGRAVLFLDPSEEE 405 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/40 (58%), Positives = 30/40 (75%), Gaps = 0/40 (0%) Query 26 TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 TDIQ+ +I L G DVL AA+TGSGKT AF +PV++ +Y Sbjct 73 TDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLENLY 112 >sp|Q59N29|SPB4_CANAL ATP-dependent rRNA helicase SPB4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=SPB4 PE=3 SV=1 Length=631 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 92/349 (26%), Positives = 154/349 (44%), Gaps = 68/349 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPK---LRELLIIGGVA-ARDQLS-VLENGVDIV 343 ++++ P+RELA Q + Q +Y+ K + L++G + R+ L+ L N I+ Sbjct 96 SIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQIL 155 Query 344 VGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 +GTPGR L+ L S+ + S + ++LDEAD LL + + + ++P+ G Sbjct 156 IGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLPKQRRTG---- 211 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLK-----GEDS-VPDTVHHVVVPVNPKTDRLW 456 + SAT+ S + M+ P V +K GE S P ++ + +NP+ Sbjct 212 --LFSATISSAG-NTIFRTGMNNPVKVQVKSKNYFGEQSNSPKSLQLSYMMINPE----- 263 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 LK + + +++ +AI++ T Sbjct 264 -----------------------------------LKITTLLTILSKYQYKKAIVYFPTC 288 Query 517 IDCDNLEQYF--IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF----LI 570 + Q F + Q D+ FS LHG R + L+ F +GD+ L+ Sbjct 289 TSVKHFYQIFNKVYQQESSDEPLKFFS---LHGQLNTKSRLKTLDNFTQGDINLYKHILM 345 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 TDVAARGIDI V VI + P + ++HR GR GRA ++G AI ++ Sbjct 346 TTDVAARGIDIPDVDLVIQIDPPTDPNVFLHRCGRTGRANKVGRAIVML 394 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/56 (45%), Positives = 37/56 (66%), Gaps = 0/56 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 I +A+ M + T +QA +IPL+ G DV++ A TGSGKT +F IPV+Q + + L Sbjct 21 IKEAISSMGYPTMTPVQASTIPLLSGNKDVVVEAVTGSGKTLSFVIPVLQKISDRL 76 >sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus OX=10116 GN=Ddx52 PE=2 SV=1 Length=598 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 85/348 (24%), Positives = 148/348 (43%), Gaps = 57/348 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI-IGGVAARDQLSVLENGVDIVVGT 346 +AL++ P+RELA Q ++ K + R +I +AA+ DI+V T Sbjct 237 RALVISPTRELASQIH---RELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTT 293 Query 347 PGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 P RL L+ ++L+ V +LV+DE+D L G + F +++ + TS +++ Sbjct 294 PNRLIYLLKQEPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSP--KVRRA 351 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT ++DV++ + + V + +S +TV ++ V +T +L Sbjct 352 MFSATF-AYDVEQWCKLNLDNIVSVSIGARNSAVETVEQELLFVGSETGKL--------- 401 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + ++ + G N P ++F ++ L Sbjct 402 ----LAMRELVKKGFNPP--------------------------VLVFVQSIERAKELFH 431 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 I +G D +H +R +R + F+ G + LICT + ARGID GV Sbjct 432 ELIYEGINVD---------VIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGV 482 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 VIN P Y+HRIGR GRA G A++ + + + V + Sbjct 483 NLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVAN 530 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 24/56 (43%), Positives = 39/56 (70%), Gaps = 0/56 (0%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 E + P + Q + + + +PT IQ ++IP++L G ++L +A TGSGKT AFSIP++ Sbjct 170 EYKISPRLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPIL 225 >sp|A3GGE9|DBP4_PICST ATP-dependent RNA helicase DBP4 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP4 PE=3 SV=2 Length=765 Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 89/343 (26%), Positives = 151/343 (44%), Gaps = 66/343 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALIV P+RELA QT + + KY L+ GG + + + + ++I+VGTPG Sbjct 122 ALIVSPTRELAVQTFEVLTKIGKY---NTFSAGLVTGGKDVQYEKERV-SRMNILVGTPG 177 Query 349 RLDD-LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R+ L + S ++ LVLDEAD L G+ I+ + +P Q ++ S Sbjct 178 RISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNIVGHLPPTR------QTLLFS 231 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSV---PDTV--HHVVVPVNPKTDRLWERLGKS 462 AT+ S VK L+ + P + + + V P+++ +++ +P++ K D LW + KS Sbjct 232 ATV-SDSVKDLARLSLTNPKRIGVSSDQDVSATPESLDQYYIRIPLDEKLDVLWSFI-KS 289 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 H+++ KIL + F +K Sbjct 290 HLKS-----------------------KIL-----------------VFFSSSKQVQYAY 309 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 E + Q G S + L+G K R + +F + L TD+ ARG+D Sbjct 310 ETFRTLQPG--------ISLLKLYGRHKQTSRLETTVKFTQAQYACLFATDIVARGLDFP 361 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +V+ V P++ YVHR+GR R R G ++ ++ +E+ Sbjct 362 AIDWVVQVDCPEDAVTYVHRVGRAARFGRQGKSLLMLLPSEEE 404 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ FS++ + E + + E ++ TDIQ ++IP+ L G D++ A TGSGKT AF IPV Sbjct 46 ISQFSDLPITQETLRGLNESSFMSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPV 105 Query 61 IQ 62 ++ Sbjct 106 VE 107 >sp|Q4HZ68|DBP7_GIBZE ATP-dependent RNA helicase DBP7 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP7 PE=3 SV=1 Length=744 Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 99/355 (28%), Positives = 156/355 (44%), Gaps = 45/355 (13%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+IV P+RELA+Q +++ + P L I GG + + + + + GV+ +V TPG Sbjct 232 AIIVAPTRELAKQVHTVLEKLIRPF--PWLVSTAITGGESKKAEKARIRKGVNFLVATPG 289 Query 349 RLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV-----TSDGKRLQ 402 RL D + +T LNLS VR+L+LDE D L+ G+ D + ++ + V DG L+ Sbjct 290 RLADHIDNTKALNLSIVRWLILDEGDRLMDLGFEDDLKKVITALKAVDVSDTLPDGTPLK 349 Query 403 -------VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED----------SVPDTVH--H 443 ++CSAT+ +V+KL E + T++ K ED P +H + Sbjct 350 ALPERRVTVLCSATM-KMNVQKLGEMSLADATFLAAKKEDMELDVQKSEMKAPAQLHQYY 408 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK-GEYAVRAIK 502 VVP + L L + R A+S + E ++ E V A K Sbjct 409 SVVPAKLRLVTLISYLKSTFSRRGKTMKAIIFISCADSVDFHYELLRDPNTTEAPVAASK 468 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 E + I + +I P+ H+ +HG R L+ F Sbjct 469 EAE----------SISKTVSKAAYITSPASPEVVLHR-----MHGSLSQPIRTATLKSFS 513 Query 563 K-GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 LI TDV++RG+DI V VI +++HR+GR RA + G A+ Sbjct 514 ACKSPSLLITTDVSSRGLDIPSVDLVIEYDPAFSFADHIHRVGRTARAGKPGDAL 568 Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 35/65 (54%), Gaps = 1/65 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIP 59 +A F + + + + +M PT IQ + IP ++ D + AETGSGKT A+ +P Sbjct 149 VANFGTLTISARLVDELGKMGLERPTGIQNKVIPHMLTSSSDAFVQAETGSGKTLAYLLP 208 Query 60 VIQIV 64 ++ V Sbjct 209 ILHRV 213 >sp|Q6C835|DBP7_YARLI ATP-dependent RNA helicase DBP7 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP7 PE=3 SV=1 Length=799 Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 95/359 (26%), Positives = 153/359 (43%), Gaps = 57/359 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+I+ P+REL Q + ++ + P + ++IGG + + + + GV+I+V TPG Sbjct 310 AVILTPTRELTTQIYSVLETLCRKA-CPWIVPGIVIGGEKKKSEKARIRKGVNILVATPG 368 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM------------HNQIPQVT 395 RL D +T L+LSQVR++VLDE D L+ G+ + I ++ N + + Sbjct 369 RLADHFDNTEALDLSQVRWVVLDEGDRLMELGFEETITKILRTIEWKSVLRGENYLKDIP 428 Query 396 SDGK----RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP---- 447 + K R ++CSAT+ V +L + + WV DSV D + V Sbjct 429 KNLKPLPSRRVTVLCSATMKG-GVTELGKSTLKDADWV---SNDSVEDALAETSVETFSA 484 Query 448 ---------VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 V P RL LG +R D + + + T S+++ + Sbjct 485 PSQLVQEWVVVPAKLRLVTLLG--ALRGDILQSSEKTNTKVIVFLSCSDSVDFHFDVLSR 542 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + +KMD A D S LHG R L Sbjct 543 DGSQINKMDTAKTAPLLLDDVST-------------------SVYKLHGSLSQQARTATL 583 Query 559 ERFKKGDV-RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 F K L+CTDVA+RG+D+ + +VI P ++++HR+GR RA + G A+ Sbjct 584 ASFAKNSTPSILLCTDVASRGLDLPKITHVIEYDPPFSIEDHLHRVGRTARAGQDGRAL 642 Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS +G + A+ M PT IQ +IP LI D+ + A+TGSGKT AF +PV++ Sbjct 235 FSGLGCSQRLVDALVGMQLAKPTKIQRATIPRLIQRERDLFVQAQTGSGKTLAFVLPVLE 294 Query 63 IV 64 + Sbjct 295 RI 296 >sp|Q5ZBH5|RH25_ORYSJ DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0618400 PE=2 SV=1 Length=594 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 93/340 (27%), Positives = 146/340 (43%), Gaps = 65/340 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV-AARDQLSVLENGVDIVVGTPG 348 L++ P+RELA Q K+ KY + L ++IGG ++Q S+ N I+V TPG Sbjct 206 LVMCPTRELAIQVAVEAKKLLKY--HRSLGVQVVIGGTRLTQEQRSMQANPCQILVATPG 263 Query 349 RLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 RL D V L V+ LVLDEAD LL G+ I R+ +P K Q ++ Sbjct 264 RLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDIERIIASVP------KERQTLL 317 Query 406 CSATLHSFDVKKLSEKIMH-----FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 SAT+ +V+++S M T D E + ++ P++ L++ L Sbjct 318 FSATVPE-EVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFMIAPLDLHFSILYDVL- 375 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K H+ D +Y V IIFC T + Sbjct 376 KKHVAED--------------------------ADYKV-----------IIFCTTAMVTK 398 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + + Q + + +H + R + + F+K L+ +DV+ARG+D Sbjct 399 LVAEILSQ---------LRLNIREIHSRKSQSARTKVSDEFRKSRGLILVSSDVSARGVD 449 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 V VI V +P ++Q Y+HR+GR GR + G + L+A Sbjct 450 YPDVTLVIQVGVPADRQQYIHRLGRTGRKGKEGQGLLLLA 489 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P +AV++ + T +Q ++P+IL G DVL A+TG+GKT AF +P I++ Sbjct 128 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEV 187 Query 64 V 64 + Sbjct 188 L 188 >sp|Q6FPT7|DBP4_CANGA ATP-dependent RNA helicase DBP4 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP4 PE=3 SV=1 Length=765 Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 90/347 (26%), Positives = 152/347 (44%), Gaps = 55/347 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q + + + + L+IGG +L + ++I++GTPG Sbjct 116 ALIISPTRELAMQIYEVLVKIGSHT---QFSAGLVIGGKDVNFELERIAK-INILIGTPG 171 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L + LN S ++ LVLDEAD L G+ ++ + +P Q ++ S Sbjct 172 RILQHMDQAVGLNTSNLQMLVLDEADRCLDMGFQKTLDAIVGNLP------PDRQTLLFS 225 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT S + L+ + + + DS D P PKT L +S+I D Sbjct 226 AT-QSQSISDLAR--LSLTDYKKIGTIDSSEDG------PATPKT------LQQSYIIAD 270 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 ++ + +L Y+ IK H + I+F + + + F Sbjct 271 -----------------LADKLDVL---YSF--IKSHLKTKMIVFFSSSKQVHFVYETFR 308 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G S + LHG +K R + L++F + L TDV ARGID V +V Sbjct 309 KMQPG-------ISLLHLHGRQKQRARTETLDKFFRAQQVCLFATDVVARGIDFPAVDWV 361 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 I V P++ Y+HR+GR R + G ++ ++ ++E + + + Sbjct 362 IQVDCPEDVDTYIHRVGRAARYGKKGRSLIILTPQEEAFLTRMAAKK 408 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + E ++ TDIQ +SI L G DV A+TGSGKT AF +PV++ Sbjct 43 FKDLPISKSTLKGLNEASFIKMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLEK 102 Query 64 VY 65 +Y Sbjct 103 LY 104 >sp|Q7S2N9|HAS1_NEUCR ATP-dependent RNA helicase has-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=has-1 PE=3 SV=1 Length=578 Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 85/338 (25%), Positives = 142/338 (42%), Gaps = 66/338 (20%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N A++V P+RELA Q ++ K N ++IGG R + Sbjct 169 LSSLRFKPRNGTGAIVVTPTRELALQIFGVARELMK---NHSQTYGVVIGGANRRAEAEK 225 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++++ TPGRL D + +R L++DEAD +L G+ D + ++ +P+ Sbjct 226 LGKGVNLLIATPGRLLDHLQNTPFVFKNMRSLIIDEADRILEIGFEDEMRQIIKILPK-- 283 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNP 450 + ++ + + T D+ ++S + P +V++ E TV +VVV + Sbjct 284 -EDRQTMLFSATQTTKVEDLARIS--LRPGPLYVNVDEEKQF-STVEGLDQGYVVVDADK 339 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 + L+ L K + V NS + +SE Sbjct 340 RFLLLFSFLKKMQKKKVIVFFS-----SCNSVKYYSE----------------------- 371 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 L QY + LHG +K +R F LI Sbjct 372 -----------LLQYI------------DLQVLDLHGKQKQQKRTNTFFEFCNAKQGTLI 408 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 CTDVAARG+DI V +++ PD+ ++Y+HR+GR R Sbjct 409 CTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTAR 446 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/61 (48%), Positives = 41/61 (67%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+ + + +A+ EM + T+IQ IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 109 FSELNLSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEM 168 Query 64 V 64 + Sbjct 169 L 169 >sp|Q6FIL3|HAS1_CANGA ATP-dependent RNA helicase HAS1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=HAS1 PE=3 SV=1 Length=494 Score = 91.3 bits (225), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 89/330 (27%), Positives = 147/330 (45%), Gaps = 57/330 (17%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 KF P N +I+ P+RELA Q +++ ++ ++IGG R + L G Sbjct 95 KFKPRNGTGVIIITPTRELALQIFGVVRELMEFHSQT---FGIVIGGANRRQEAEKLMKG 151 Query 340 VDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 V+++V TPGRL D L +T ++ LV+DEAD +L G+ D + QI ++ + Sbjct 152 VNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMR----QIIKILPNE 207 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 R Q ++ SAT + V+ LS R+ R Sbjct 208 DR-QSMLFSAT-QTTKVEDLS----------------------------------RISLR 231 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 G I H +T G + E+ K ++ +K ++ + I+F + Sbjct 232 PGPLFINVVSEH-DSSTADGLEQGYVVCESDKRFLLLFSF--LKRNQKKKIIVFLSS--- 285 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 C+++ +Y+ + D + LHG +K +R F + LICTDVAARG Sbjct 286 CNSV-KYYAELLNYID-----LPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARG 339 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +DI V ++I PD+ ++Y+HR+GR R Sbjct 340 LDIPAVDWIIQFDPPDDPRDYIHRVGRTAR 369 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 42/63 (67%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + +A+E+M + T +QA +IP ++ G DVL AA+TGSGKT AF +P I+ Sbjct 30 SFKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTIE 89 Query 63 IVY 65 +++ Sbjct 90 LLH 92 >sp|Q6CXB7|HAS1_KLULA ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=HAS1 PE=3 SV=1 Length=497 Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 81/333 (24%), Positives = 150/333 (45%), Gaps = 57/333 (17%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 KF P N +++ P+RELA Q ++ ++ ++IGG R + L G Sbjct 100 KFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQT---FGIVIGGANRRQEADKLMKG 156 Query 340 VDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 V+I++ TPGRL D L +T ++ LV+DEAD +L G+ D + ++ +P ++ Sbjct 157 VNILIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILP---NED 213 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++ + + T D+ ++S + P ++++ DS DT Sbjct 214 RQSMLFSATQTTKVEDLARIS--LRPGPLFINV---DSEKDT------------------ 250 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 +T G + E+ K ++ +K ++ + I+F + Sbjct 251 ---------------STADGLEQGYVVCESDKRFLLLFSF--LKRNQKKKVIVFLSS--- 290 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 C+++ +Y+ + D + LHG +K +R F + L+CTDVAARG Sbjct 291 CNSV-KYYAELLNYID-----LPVLELHGKQKQQKRTNTFFEFCNAERGILVCTDVAARG 344 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +DI V ++I PD+ ++Y+HR+GR R + Sbjct 345 LDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTK 377 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 42/63 (67%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ + +A+ +M + T +Q +IP +L G DVL AA+TGSGKT AF IP I+ Sbjct 35 SFSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIE 94 Query 63 IVY 65 +++ Sbjct 95 MLH 97 >sp|A6ZPU3|DBP4_YEAS7 ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP4 PE=3 SV=1 Length=770 Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 89/356 (25%), Positives = 156/356 (44%), Gaps = 69/356 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q + + + L+IGG + +L + ++I++GTPG Sbjct 116 ALIISPTRELAMQIYEVLTKIGSHTS---FSAGLVIGGKDVKFELERISR-INILIGTPG 171 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L LN S ++ LVLDEAD L G+ ++ + V++ Q ++ S Sbjct 172 RILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAI------VSTLSPSRQTLLFS 225 Query 408 ATLHS--FDVKKLS---EKIMHFPTWVD--LKGEDSVPDTVH--HVVVPVNPKTDRLWER 458 AT D+ +LS K + +D + E S P+T+ ++ VP+ K D L+ Sbjct 226 ATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQQFYIEVPLADKLDILFSF 285 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 + KSH++ + I+F + Sbjct 286 I-KSHLKC-----------------------------------------KMIVFLSSSKQ 303 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 + + F + G S + LHG +K R + L++F + L TDV ARG Sbjct 304 VHFVYETFRKMQPG-------ISLMHLHGRQKQRARTETLDKFNRAQQVCLFATDVVARG 356 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 ID V +V+ V P++ Y+HR+GR R + G ++ ++ ++++ + ++R Sbjct 357 IDFPAVDWVVQVDCPEDVDTYIHRVGRCARYGKKGKSLIMLTPQEQEAFLKRLNAR 412 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + E ++ T+IQA+SIP+ L G DVL AA+TGSGKT AF +PVI+ Sbjct 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEK 102 Query 64 VY 65 +Y Sbjct 103 LY 104 >sp|Q74Z73|HAS1_EREGS ATP-dependent RNA helicase HAS1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=HAS1 PE=3 SV=2 Length=504 Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 83/335 (25%), Positives = 142/335 (42%), Gaps = 61/335 (18%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 KF P N +++ P+RELA Q ++ ++ ++IGG R + L G Sbjct 105 KFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQT---FGIVIGGANRRQEAEKLAKG 161 Query 340 VDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 V++++ TPGRL D L +T ++ LV+DEAD +L G+ D + ++ +P ++ Sbjct 162 VNLLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIKILP---NED 218 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH--HVVVPVNPKTDRLW 456 ++ + + T D+ ++S + VD + E S D + +VV + + L+ Sbjct 219 RQSMLFSATQTTKVEDLARISLRPGPLFINVDSEKETSTADGLEQGYVVCDSDKRFLLLF 278 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 L K + V NS + ++E + Sbjct 279 TFLKKFQNKKIIVFLS-----SCNSVKYYAELLNY------------------------- 308 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 ID LE LHG +K +R F + L+CTDVAA Sbjct 309 IDLPVLE---------------------LHGKQKQQKRTNTFFEFCNAERGILVCTDVAA 347 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 RG+DI V ++I PD+ ++Y+HR+GR R + Sbjct 348 RGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTK 382 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+ + + +A+ +M + T +QA +IP ++ G DVL AA+TGSGKT AF +P I++ Sbjct 41 FDELNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEM 100 Query 64 VY 65 ++ Sbjct 101 LH 102 >sp|A5E2I8|SPB4_LODEL ATP-dependent rRNA helicase SPB4 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=SPB4 PE=3 SV=1 Length=637 Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 93/391 (24%), Positives = 173/391 (44%), Gaps = 71/391 (18%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDN--PKLRELLIIG--GVAARDQLSVLENGVD 341 A+++ P+RELA+Q + + + D+ P+++ L++G G D S EN Sbjct 96 AIVMAPTRELAKQIQMVFDKVLELLPEEDSYEPRIKTQLLVGFLGNVREDLDSYQENRPQ 155 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 I++ TPGRL D +S + S + ++LDEAD LL + + ++ +P+ G Sbjct 156 ILIATPGRLLDFMSLQIVKTSSLEIVILDEADKLLDMSFETDVIKILKMLPKQRRTG--- 212 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT+ + DT+ + NP K Sbjct 213 ---LFSATISA------------------------AGDTIFRTGMN-NP---------VK 235 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY----AVRAIKEHKMDQAIIFCRTKI 517 ++T + + N N+P + +++ E+ ++ +++++ +AI++ T Sbjct 236 LQVKTKNFLGEQN-----NAPTSLQLSYMMIEPEHKLTTMLQMLRDNQFKKAIVYFPT-- 288 Query 518 DCDNLEQYF-----IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR----F 568 C +++ ++ + + D LHG R LE+F +G+ Sbjct 289 -CTSVKHFYQMLSKLCKSSANDIDISALLFFSLHGQLTTKSRLNTLEKFTEGNDESKKYI 347 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARGIDI V VI + P + ++HR GR GRA ++G AI ++ + ++ Y Sbjct 348 LMATDVAARGIDIPDVDLVIQIDPPTDPSVFLHRCGRTGRANKVGRAIVMLNNDTQEEDY 407 Query 629 HVCSSRGKGCYNTRLK--EDGGCTIWYNEMQ 657 V K + T++ ED ++N+ Q Sbjct 408 -VGFMEVKSVFMTKIDPPEDKDNHSFHNKFQ 437 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/74 (41%), Positives = 46/74 (62%), Gaps = 0/74 (0%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKD 70 P + A+ +++ T +QA +IPL+ G DV++ A TGSGKT AF+IPV+Q V + L Sbjct 19 PWLKDAIRSLNYPTMTPVQASTIPLLSGNKDVIVEAVTGSGKTLAFAIPVLQKVSKRLYQ 78 Query 71 QQEGKKGKTTIKTG 84 EG++ +K G Sbjct 79 VPEGEEKPEPVKRG 92 >sp|P20448|DBP4_YEAST ATP-dependent RNA helicase HCA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HCA4 PE=1 SV=2 Length=770 Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 89/356 (25%), Positives = 156/356 (44%), Gaps = 69/356 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q + + + L+IGG + +L + ++I++GTPG Sbjct 116 ALIISPTRELAMQIYEVLTKIGSHTS---FSAGLVIGGKDVKFELERISR-INILIGTPG 171 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L L LN S ++ LVLDEAD L G+ ++ + V++ Q ++ S Sbjct 172 RILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAI------VSTLSPSRQTLLFS 225 Query 408 ATLHS--FDVKKLS---EKIMHFPTWVD--LKGEDSVPDTVH--HVVVPVNPKTDRLWER 458 AT D+ +LS K + +D + E S P+T+ ++ VP+ K D L+ Sbjct 226 ATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQQFYIEVPLADKLDILFSF 285 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 + KSH++ + I+F + Sbjct 286 I-KSHLKC-----------------------------------------KMIVFLSSSKQ 303 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 + + F + G S + LHG +K R + L++F + L TDV ARG Sbjct 304 VHFVYETFRKMQPG-------ISLMHLHGRQKQRARTETLDKFNRAQQVCLFATDVVARG 356 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 ID V +V+ V P++ Y+HR+GR R + G ++ ++ ++++ + ++R Sbjct 357 IDFPAVDWVVQVDCPEDVDTYIHRVGRCARYGKKGKSLIMLTPQEQEAFLKRLNAR 412 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + E ++ T+IQA+SIP+ L G DVL AA+TGSGKT AF +PVI+ Sbjct 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEK 102 Query 64 VY 65 +Y Sbjct 103 LY 104 >sp|Q6CKZ4|DBP6_KLULA ATP-dependent RNA helicase DBP6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP6 PE=3 SV=1 Length=630 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 83/301 (28%), Positives = 135/301 (45%), Gaps = 43/301 (14%) Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L N DI++ TPGRL D + +L ++FLVLDEAD LL+Q + ++ + + + Sbjct 308 LYNSPDILIITPGRLVDHLQMESFDLKTLKFLVLDEADRLLNQSFQNWNQVLFHHLTNDK 367 Query 396 SDGKRLQVI--VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 D + VI V SATL + + +KL +H P + D+V +P Sbjct 368 QDKRPGNVIKMVFSATLTT-NAEKLYNLYLHNPKIF-------LTDSVKLYSIP------ 413 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANS---PEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 ++L + ++ P A S P + I +K + A + + Sbjct 414 ---KKLQELNVNI----------PTAKSLFKPLLLLRIIHDIKSSASRNA-------KIL 453 Query 511 IFCRTKIDCDNLEQYF-IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-- 567 +F ++ LE G G + + +H + ++ ++ F + + Sbjct 454 VFVKSNEASIRLESLLHAMLGSGIIEDEYNMFLSSIHSNISKGSSRKLIQEFASSEQKKS 513 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS-LVATEKEKV 626 LI TD+ ARGIDI+ + +VIN LP Q YVHR GR RA G+AI+ LV ++K Sbjct 514 VLISTDIMARGIDINEITHVINYDLPISSQQYVHRCGRTARANTEGIAINLLVGKGEQKF 573 Query 627 W 627 W Sbjct 574 W 574 Score = 38.9 bits (89), Expect = 0.20, Method: Compositional matrix adjust. Identities = 15/25 (60%), Positives = 22/25 (88%), Gaps = 0/25 (0%) Query 40 GDVLMAAETGSGKTGAFSIPVIQIV 64 GD+L+ A TGSGKT A+S+P++QI+ Sbjct 229 GDILVNASTGSGKTLAYSVPLVQIL 253 >sp|Q9UTP9|DBP4_SCHPO ATP-dependent RNA helicase dbp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp4 PE=1 SV=1 Length=735 Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 96/379 (25%), Positives = 160/379 (42%), Gaps = 73/379 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL---LIIGGVAARDQLSVLENGVDIVVG 345 AL++ P+RELA QT F+ + +L LIIGG +++ L ++I+V Sbjct 114 ALVISPTRELAIQT------FETLVKIGRLHSFSAGLIIGGNNYKEEKERLSR-MNILVC 166 Query 346 TPGRLDDLVSTG-KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL + + S ++ L+LDEAD +L G+ ++ + + +P Q + Sbjct 167 TPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPV------HRQTM 220 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVH--HVVVPVNPKTDRLWERLG 460 + SAT + VK L+ + P ++ + D S P ++ ++ VP+ K D L+ Sbjct 221 LFSAT-QTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQFYLTVPLTEKLDILF---- 275 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 IRT H + I+F + Sbjct 276 -GFIRT-------------------------------------HLKFKTIVFLSSCKQVR 297 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + + F + G S + LHG +K R + +F L CTD+ ARG+D Sbjct 298 FVYETFRRMRPG-------ISLLHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDIVARGLD 350 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 V +VI + P++ Y+HR+GR R R G A+ L+ E+ + S+ Sbjct 351 FPAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNAL-LLLLPSEEAFLKRLESKKIAVER 409 Query 641 TRLKEDGGCTIWYNEMQLL 659 +K DG T N++Q L Sbjct 410 INVK-DGKKTSIRNQLQNL 427 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 40/62 (65%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + A++ ++ T+IQ + IP L G D+L AA+TGSGKT AF +P+I+ Sbjct 41 FAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIEN 100 Query 64 VY 65 +Y Sbjct 101 LY 102 >sp|Q2GV49|SPB4_CHAGB ATP-dependent rRNA helicase SPB4 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=SPB4 PE=3 SV=1 Length=646 Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 107/373 (29%), Positives = 171/373 (46%), Gaps = 69/373 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKY-------------------IDNPKLRELLIIGGV- 327 +A+I+ P+RELA Q N + F K+ P + L++GG Sbjct 90 QAIIISPTRELASQIYNVLVSFLKFHAPSAHLLPHAKGDEKRPATTEPVVVPQLLVGGTT 149 Query 328 -AARDQLSVLENGVDIVVGTPGRLDDLVSTG--KLNLSQVRFLVLDEADGLLSQGYSDFI 384 AA D + L +I++GTPGRL +L+ST K S LV+DEAD LL G+S + Sbjct 150 KAAEDLSTFLRLSPNILIGTPGRLAELLSTPYVKAPSSSFEVLVMDEADRLLDLGFSQEL 209 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD--TVH 442 R+ +P+ G + SA+L S V++L + +P + ++ + S+ D V Sbjct 210 TRILGYLPKQRRTG------LFSASL-SEAVERLITVGLLYPHKITVRVK-SLRDGGIVQ 261 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 P++ L S+I T P + + ++ L Sbjct 262 ERKTPMS---------LQMSYIVT----------PASQKIPALCQLLERL---------- 292 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF- 561 E + ++I+F T C + +YF + G G FS V LHG +P R++N ERF Sbjct 293 EPRPSRSIVFFST---CFAV-KYFARVLHGILPPG--FSIVSLHGKLEPQVREKNFERFV 346 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 L+ TD+AARG+DI V V+ P + + ++HR GR GRA R GLA+ ++ Sbjct 347 NAASPTVLLTTDIAARGLDIPQVDLVVQHDPPTDTKVFIHRCGRAGRAGRRGLAVVMLQP 406 Query 622 EKEKVWYHVCSSR 634 +E+ + + R Sbjct 407 GREEGYVQLLDVR 419 Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 30/55 (55%), Gaps = 0/55 (0%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + P I + M + PT +Q + G DV++ A TGSGKT AF IPV++ Sbjct 21 SLAPWILDYLSSMGFEQPTPVQKSCFDIFRGNKDVVVEAVTGSGKTLAFLIPVVE 75 >sp|Q9DGP9|DDX25_XENLA ATP-dependent RNA helicase DDX25 OS=Xenopus laevis OX=8355 GN=deadsouth PE=2 SV=1 Length=483 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 98/380 (26%), Positives = 160/380 (42%), Gaps = 77/380 (20%) Query 256 VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L+ P I +SQ SG A +++ P+ + + P+ ELA QT ++ Sbjct 130 MMLADPPQNLIAQSQ-SGTGKTAAFVLAMLSRVDANKKYPQCICLSPTFELALQTGKVVE 188 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL-NLSQVRF 366 + K+ ++ L +L IV+GTPG + D +L + + Sbjct 189 EMGKFCAGIEVIYALRGNRPGKGSRLEA-----QIVIGTPGTVLDWCFKLRLITVENISV 243 Query 367 LVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 VLDEAD +++ QG+SD R+ +P K Q+++ SAT V +E+I+ Sbjct 244 FVLDEADVMINVQGHSDHSVRVKRSMP------KSCQMLLFSATFED-SVWAFAERIVPD 296 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P + LK E+ + D K+ Sbjct 297 PNIIKLKKEELTLKNIQQFY---------------------DQCENKE------------ 323 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + L Y V I QAI+FC+T+ L Q GHQ + L Sbjct 324 -QKYSALCNLYGVITIA-----QAIVFCQTRKIASWLSQKL-------SDDGHQVAL--L 368 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------DEKQNY 599 G+ ++R ++RF++G + L+ T+V ARGID+ V V+N LP + + Y Sbjct 369 SGELPVYDRADMIQRFREGREKVLVTTNVCARGIDVEQVSIVVNFDLPVNVDGSVDFETY 428 Query 600 VHRIGRVGRAERMGLAISLV 619 +HRIGR GR + G+A+SL+ Sbjct 429 LHRIGRTGRFGKKGIAVSLI 448 Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/64 (25%), Positives = 38/64 (59%), Gaps = 2/64 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPV 60 +F E+ + E+ + + M + P+ IQ ++P++L +++ +++G+GKT AF + + Sbjct 98 SFEELHLKNELLRGIYAMGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAM 157 Query 61 IQIV 64 + V Sbjct 158 LSRV 161 >sp|Q4IAS1|DBP4_GIBZE ATP-dependent RNA helicase DBP4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP4 PE=3 SV=1 Length=793 Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/341 (26%), Positives = 140/341 (41%), Gaps = 65/341 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q ++ K L+IGG + +++ L+ ++I+V TPG Sbjct 126 ALIISPTRELAAQIFEVLR---KVGTKHSFSAGLVIGGKSLKEEAERLDR-MNILVCTPG 181 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L T + + ++ LVLDEAD ++ G+ ++ + +P + Q ++ S Sbjct 182 RMLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSAVDALIEHLP------RERQTLMFS 235 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT S V L+ + P +V + + P + H++V P+ K D L+ Sbjct 236 AT-QSKKVSDLARLSLKDPEYVSVHEAAVSATPTNLQQHYIVTPLTEKLDTLY------- 287 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 G + S+ I L VR + E Sbjct 288 --------------GFIKANLKSKIIVFLSSGKQVRFV--------------------YE 313 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G P + LHG +K R + RF L TDV ARGID Sbjct 314 SFRHLQPGIP--------LLHLHGRQKQGARMEITSRFTAAKQTCLFATDVVARGIDFPA 365 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V +VI P++ Y+HR+GR R E G A+ + +E Sbjct 366 VDWVIQADCPEDVDTYIHRVGRTARYESNGRAVLFLDPSEE 406 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/62 (47%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+ + A+ +E + TD+QA ++PL L G D+L AA+TGSGKT AF IPV++ Sbjct 53 FSELPLSVPTAEGLEIAHFQTLTDVQARAVPLALKGKDILGAAKTGSGKTLAFLIPVLEK 112 Query 64 VY 65 +Y Sbjct 113 LY 114 >sp|Q75C76|DBP4_EREGS ATP-dependent RNA helicase DBP4 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP4 PE=3 SV=2 Length=763 Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 86/342 (25%), Positives = 150/342 (44%), Gaps = 57/342 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q + + KY+ L+IGG + ++ + + ++I++GTPG Sbjct 116 ALVISPTRELAMQIYEVLVKIGKYMS---FSAGLVIGGKDVKFEMERV-SKINILIGTPG 171 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL + + LN S ++ LVLDEAD L G+ ++ + + +P Q ++ S Sbjct 172 RLLQHMDQSVGLNTSNLQILVLDEADRCLDMGFKKALDAIVSNLPPSR------QTLLFS 225 Query 408 ATLHS--FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 AT D+ +LS + + T + G P + + P E L + +I+ Sbjct 226 ATQSQSLADLARLS--LADYKTVGTMDG----PSSKNKPATP---------ENLEQFYIQ 270 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + + IL IK H + I+F + + + Sbjct 271 V-----------------ALPDKLDIL-----FSFIKSHLKSKMIVFLSSSKQVHFVYET 308 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F + G S + LHG +K R + L++F + L TDV ARGID V Sbjct 309 FRKMQPG-------ISLMHLHGRQKQTARTETLDKFSRAQHVCLFSTDVVARGIDFPSVD 361 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 +VI P++ Y+HR GR R + G ++ ++ ++E + Sbjct 362 WVIQTDCPEDVDTYIHRAGRSARYGKTGKSLLMLTPQEEDAF 403 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 26/62 (42%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + ++E ++ TDIQ +IP+ L G DVL AA+TGSGKT AF +PV++ Sbjct 43 FQDLPISSGTVKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLEK 102 Query 64 VY 65 +Y Sbjct 103 LY 104 >sp|Q0JL73|RH26_ORYSJ DEAD-box ATP-dependent RNA helicase 26 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0618500 PE=2 SV=1 Length=536 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 94/338 (28%), Positives = 150/338 (44%), Gaps = 69/338 (20%) Query 283 LPNAPKA--LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA-ARDQLSVLENG 339 LP +P L++ P+RELA Q ++ KY + L ++IGG ++Q S+ N Sbjct 139 LPRSPSINLLVICPTRELANQVAAEARKLLKY--HRSLGVQVVIGGTKLPQEQRSMQSNP 196 Query 340 VDIVVGTPGRLDD-LVSTGKLN--LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 I+V TPGRL D L +T + + V+ LVLDEAD LL G+ I ++ IP Sbjct 197 CQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEKIIAFIP---- 252 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMH----FPTWVDLKGEDSVPDTVH--HVVVPVNP 450 K Q ++ SAT+ +V+++S M F V +G++ V ++V P++ Sbjct 253 --KERQTLLFSATVPE-EVRQISHIAMKRGYKFINTVK-EGDEETHSQVSQMYMVAPLDL 308 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 L+ L K HI D +Y V I Sbjct 309 HFSILYNVL-KKHIAED--------------------------ADYKV-----------I 330 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 +FC T + + + Q + + +H + R + + F+K L+ Sbjct 331 VFCTTAMVTKLVAEVLSQL---------KLNIREIHSRKSQSARTKVSDEFRKSKGLILV 381 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +DV+ARG+D V VI V LP +++ Y+HR+GR GR Sbjct 382 SSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGR 419 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + V P +A+++ + T +Q ++P+IL G DVL A+TG+GKT AF +P I++ Sbjct 76 FDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIEL 135 Query 64 V 64 + Sbjct 136 L 136 >sp|A7TJS7|SPB4_VANPO ATP-dependent rRNA helicase SPB4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=SPB4 PE=3 SV=1 Length=607 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 152/346 (44%), Gaps = 60/346 (17%) Query 289 ALIVEPSRELAEQTLNNIKQF-KKYIDN--PKLRELLIIGGV-AARDQLS-VLENGVDIV 343 +LIV P++ELA+Q + + F + Y +N P +LL+ V RD +S +EN I+ Sbjct 86 SLIVSPTKELAKQIHSVFESFLEHYPENLYPIRSQLLVGTNVKTVRDDVSDFMENKPQIL 145 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +GTPGR+ D + + S ++LDEAD LL + + + N +P+ G Sbjct 146 IGTPGRILDFLKIPSVKTSMCSMVILDEADRLLDVSFLKDMENIMNILPKQRRTG----- 200 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SAT+ S + + + P V + + P ++ ++ + Sbjct 201 -LFSATITSAG-DNIFKTGLRNPVKVTVNSKSQAPSSL----------------KIDCAV 242 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF---CRTKIDCD 520 + TD K E + I +K + I + C + Sbjct 243 VETDK------------------------KLEQVISIINNYKFKKCIAYFPTCHSVTYFY 278 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGI 579 + QY +++G + + LHG + R + LE F + L+ TDVAARGI Sbjct 279 SFMQYLLKKGIIKE----EIQIYSLHGKLQTSARIKTLETFTETISNAVLLTTDVAARGI 334 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 DI V V+ + P + + ++HR GR GRA ++G AI+ + +E+ Sbjct 335 DIPDVDLVLQLDPPTDPEVFLHRCGRTGRANKLGKAITFLTPGREE 380 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 41/72 (57%), Gaps = 0/72 (0%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 E + P I AV+ M + T +QA +IPL DV++ + TGSGKT +F IP+ + + Sbjct 11 EYPIQPWIRSAVDVMGFENMTPVQAATIPLFARNKDVVVDSVTGSGKTVSFVIPIFEKIV 70 Query 66 ETLKDQQEGKKG 77 + + + KKG Sbjct 71 QEEANTTKMKKG 82 >sp|Q8NHQ9|DDX55_HUMAN ATP-dependent RNA helicase DDX55 OS=Homo sapiens OX=9606 GN=DDX55 PE=1 SV=3 Length=600 Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 93/343 (27%), Positives = 147/343 (43%), Gaps = 57/343 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV-AARDQLSVLENGVDIVVGTP 347 A+I+ P+RELA Q + F K+ P+ ++L IGG D + G +I+V TP Sbjct 85 AIIITPTRELAIQIDEVLSHFTKHF--PEFSQILWIGGRNPGEDVERFKQQGGNIIVATP 142 Query 348 GRLDDLVSTGKLNL---SQVR---FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 GRL+D+ L S VR LVLDEAD LL G+ IN + +P+ G Sbjct 143 GRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTG--- 199 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT + +V+ L + P V +K + + K Sbjct 200 ---LFSAT-QTQEVENLVRAGLRNPVRVSVKEKGVAASSAQ------------------K 237 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + R ++ + + E +++ + L+ HK ++ ++F T C Sbjct 238 TPSRLENYYMV------CKADEKFNQLVHFLRN---------HKQEKHLVFFST---CAC 279 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 +E Y G + +C+HG K ++R + F+K L+CTDV ARGIDI Sbjct 280 VEYY----GKALEVLVKGVKIMCIHGKMK-YKRNKIFMEFRKLQSGILVCTDVMARGIDI 334 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V +V+ P +VHR GR R G A+ + +E Sbjct 335 PEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEE 377 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 40/67 (60%), Gaps = 3/67 (4%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY---ET 67 P++ A+ E+ + T +Q+ +IPL + DV A TGSGKT AF IP+++I+ E Sbjct 18 PQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEK 77 Query 68 LKDQQEG 74 LK Q G Sbjct 78 LKKSQVG 84 >sp|Q4WV71|DBP7_ASPFU ATP-dependent RNA helicase dbp7 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp7 PE=3 SV=1 Length=758 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 100/371 (27%), Positives = 162/371 (44%), Gaps = 72/371 (19%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+++ P+REL +Q L N+ + +I +IGG + + + L G++I+V Sbjct 228 AIVLAPTRELCKQISVVLENLLRCAHWI-----VAGTVIGGEKKKSEKARLRKGLNILVA 282 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN---------RMHNQIPQVT 395 TPGRL D L +T L++S VR+LVLDE D L+ G+ + I + ++IP + Sbjct 283 TPGRLADHLDNTQALDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGIP 342 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + R I+CSATL V+KL GE S+ D VH + +P+ + Sbjct 343 A---RRTTILCSATL-KMSVQKL--------------GEISLKDAVH---IKADPEDEDE 381 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 R K+ V A+ + ++ + L + +++ + +AIIF Sbjct 382 KARRSKAEESAYRVPAQLKQSYAVVAAKLR---LVTLTAFFKRTFMRKGSVMKAIIFVSC 438 Query 516 KIDCDNLEQYFIQQ-----GGGP---DKK---------------------GHQFSCVCLH 546 D + F ++ GG P DK + + LH Sbjct 439 ADSVDFHFEVFTRKQVKEDGGEPSDTDKSEEKPPSSPHGTIAPATAFSNPSNPVTLFRLH 498 Query 547 GDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 G + R L F K + LICTDVA+RG+D+ V V+ ++++HRIGR Sbjct 499 GSLPQNVRTSTLGAFAKNKEASVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGR 558 Query 606 VGRAERMGLAI 616 R R G A+ Sbjct 559 TARVGRDGRAL 569 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/89 (33%), Positives = 48/89 (54%), Gaps = 8/89 (9%) Query 4 FSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 F+ +G+ P +A + +++ PT IQ SI +L GD + AETGSGKT A+ +P++ Sbjct 140 FTNLGLSPNLAAHLLTKLELKAPTAIQKASISQLLKEEGDAFIQAETGSGKTLAYLLPLV 199 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNK 90 Q + K G T TG ++++ Sbjct 200 QRIMAL------SKPGAQTDATGQPIVHR 222 >sp|Q757I6|MAK5_EREGS ATP-dependent RNA helicase MAK5 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MAK5 PE=3 SV=1 Length=752 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 121/512 (24%), Positives = 206/512 (40%), Gaps = 104/512 (20%) Query 210 KDLGL-AFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 KD+GL E P P N A VL+ F P + ++ KA DG+ Sbjct 166 KDIGLDEAEAPELPSWTNTMKLSATVLQG------LSRLGFSNPTEIQLQSIPKALDGHD 219 Query 267 VKSQHSGNAQVTQTKFLP-----------NAPKALIVEPSRELAEQTLNNIKQFKKYI-- 313 + + S + T +P + P LI P+RELA Q +++++ + Sbjct 220 IMGKASTGSGKTLAYGIPILEGIIRDDTDSRPIGLIFTPTRELAHQVTDHLREVGALLVK 279 Query 314 DNPKLRELLIIGGVAARDQLSVLE--NGVDIVVGTPGRLDDLVSTGKL---NLSQVRFLV 368 NP + + GG++ + Q +L+ +VV TPGR +L+ + ++V LV Sbjct 280 RNP-YSIMCLTGGLSIQKQERLLKYKGSARVVVATPGRFLELLEKDQTLIDRFAKVDTLV 338 Query 369 LDEADGLLSQGYSDFINRMHNQIPQVT--SDGKR--LQVIVCSATLHSFDVKKLSEKIMH 424 LDEAD LL G+ + R+ + + ++GK+ + ++ SAT KLS Sbjct 339 LDEADRLLQDGHFEEFERILKHLSRARKFTNGKKHGWKTMIYSATFSLDYFNKLSN---- 394 Query 425 FPTWVDLK---GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 +W +K E+ + + + H++ + + GK I + + + Sbjct 395 -TSWKKMKKAPSENEMEEVLKHLMTKIPFR--------GKPLI----IDTNPEQKVASQI 441 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 E E + + Y + + ++FC L Y + S Sbjct 442 KESLIECLPTERDLYVYYFVTLYP-GTTLVFCNAIDSVKKLNAYL---------HNLKIS 491 Query 542 CVCLHGDRKPHERKQNLERFKKGDVR--------FLICTDVAARGIDIHGVPYVINVTLP 593 +H R ++LE+F++ + LI +DVAARG+DI G+ +VI+ LP Sbjct 492 AFQIHSSMLQKNRLKSLEKFQEQAKKNQALNKPTVLIASDVAARGLDIPGIQHVIHYHLP 551 Query 594 DEKQNYVHRIGRVGRAERMGLAISLVATEK--------EKVWYHVCSSRGKGCYNTRLKE 645 Y+HR GR RAE G+A+++ + ++ +V S+GK Sbjct 552 RSADVYIHRSGRTARAENEGVAVTICSPQEAMGPLRKLRRVLAGKAGSKGKR-------- 603 Query 646 DGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI 677 W NE+ LL VEPDI Sbjct 604 ------WQNEIALLP------------VEPDI 617 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 35/56 (63%), Gaps = 0/56 (0%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 M + + Q + + + PT+IQ +SIP L G D++ A TGSGKT A+ IP+++ Sbjct 185 MKLSATVLQGLSRLGFSNPTEIQLQSIPKALDGHDIMGKASTGSGKTLAYGIPILE 240 >sp|P25808|SPB4_YEAST ATP-dependent rRNA helicase SPB4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SPB4 PE=1 SV=1 Length=606 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/379 (25%), Positives = 159/379 (42%), Gaps = 62/379 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIGGVAA--RDQLS-VLENGVDIV 343 +LI+ P+REL+ Q + + F ++ D ++ L++G A RD +S L N I+ Sbjct 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQIL 145 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +GTPGR+ D + + S +V+DEAD LL + ++ +P+ G Sbjct 146 IGTPGRVLDFLQMPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTG----- 200 Query 404 IVCSATLHSF--DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT+ S D+ K + P + + ++ P ++ VNP Sbjct 201 -LFSATMRSAGSDIFKTG---LRNPVRITVNSKNQAPSSLKLNYCVVNP----------- 245 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 +E +++L V + +K + I++ T C + Sbjct 246 ------------------------AEKLQLL-----VSILNNYKFKKCIVYFPT---CVS 273 Query 522 LEQY--FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARG 578 + + FIQ G + ++ LHG + R + L F L TDVAARG Sbjct 274 VSYFYSFIQYLGKRNILVNEVEIFSLHGKLQTSARTKTLTAFTDSLSNSVLFTTDVAARG 333 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 IDI V VI + P ++HR GR GRA R+G AI+ + +E+ + + Sbjct 334 IDIPDVDLVIQLDPPTNTDMFMHRCGRTGRANRVGKAITFLNEGREEDFIPFMQVKNVEL 393 Query 639 YNTRLKEDGGCTIWYNEMQ 657 L+ G T +Y + + Sbjct 394 EELDLEVKGITTNFYEDFR 412 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 0/71 (0%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 ++P I ++ M + T +QA +IP++ G DV++ + TGSGKT AF IPV++ V + Sbjct 12 FSLLPWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVLEKVVK 71 Query 67 TLKDQQEGKKG 77 + + KK Sbjct 72 EEANTSKFKKA 82 >sp|A7A237|SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=SPB4 PE=3 SV=1 Length=606 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/379 (25%), Positives = 159/379 (42%), Gaps = 62/379 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIGGVAA--RDQLS-VLENGVDIV 343 +LI+ P+REL+ Q + + F ++ D ++ L++G A RD +S L N I+ Sbjct 86 SLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQIL 145 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +GTPGR+ D + + S +V+DEAD LL + ++ +P+ G Sbjct 146 IGTPGRVLDFLQMPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTG----- 200 Query 404 IVCSATLHSF--DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT+ S D+ K + P + + ++ P ++ VNP Sbjct 201 -LFSATMRSAGSDIFKTG---LRNPVRITVNSKNQAPSSLKLNYCVVNP----------- 245 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 +E +++L V + +K + I++ T C + Sbjct 246 ------------------------AEKLQLL-----VSILNNYKFKKCIVYFPT---CVS 273 Query 522 LEQY--FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARG 578 + + FIQ G + ++ LHG + R + L F L TDVAARG Sbjct 274 VSYFYSFIQYLGKRNILVNEVEIFSLHGKLQTSARTKTLTAFTDSLSNSVLFTTDVAARG 333 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 IDI V VI + P ++HR GR GRA R+G AI+ + +E+ + + Sbjct 334 IDIPDVDLVIQLDPPTNTDMFMHRCGRTGRANRVGKAITFLNEGREEDFIPFMQVKNVEL 393 Query 639 YNTRLKEDGGCTIWYNEMQ 657 L+ G T +Y + + Sbjct 394 EELDLEVKGITTNFYEDFR 412 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 0/71 (0%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 ++P I ++ M + T +QA +IP++ G DV++ + TGSGKT AF IPV++ V + Sbjct 12 FSLLPWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVLEKVVK 71 Query 67 TLKDQQEGKKG 77 + + KK Sbjct 72 EEANTSKFKKA 82 >sp|P15424|MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MSS116 PE=1 SV=1 Length=664 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 100/347 (29%), Positives = 159/347 (46%), Gaps = 63/347 (18%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE---LLIIGGV---AARDQLSVLENGVD 341 KA+IV P+R+LA Q +K+ N L++ + ++GG AA ++++ L + Sbjct 182 KAVIVAPTRDLALQIEAEVKKIHDM--NYGLKKYACVSLVGGTDFRAAMNKMNKLR--PN 237 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFL---VLDEADGLLSQGYSDFINRMHNQIPQVTS-D 397 IV+ TPGRL D++ K + RF+ VLDEAD LL G+ D + + + + S Sbjct 238 IVIATPGRLIDVLE--KYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKS 295 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 ++ ++ SATL V+KL+ IM+ + L D H E Sbjct 296 ADNIKTLLFSATLDD-KVQKLANNIMNKKECLFLDTVDKNEPEAH--------------E 340 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD-QAIIFCRT- 515 R+ +S + ++ ANS E IK + IKE + +AIIF T Sbjct 341 RIDQSVVISEKF---------ANSIFAAVEHIK--------KQIKERDSNYKAIIFAPTV 383 Query 516 ---KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 C L+ F + HG ++R ++RFKK + L+CT Sbjct 384 KFTSFLCSILKNEF----------KKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCT 433 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 DV ARG+D V V+ + +P E NY+HRIGR R+ + G ++ + Sbjct 434 DVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFI 480 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 3/75 (4%) Query 1 MAAFSEMGVM-PEIAQAVEEMDWLLPTDIQAESIPLILGGGD--VLMAAETGSGKTGAFS 57 + + E GV+ EI +A+ M++ T +Q ++I IL D V+ A+TG+GKT AF Sbjct 104 LDSLLEEGVLDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFL 163 Query 58 IPVIQIVYETLKDQQ 72 IP+ Q + T D Q Sbjct 164 IPIFQHLINTKFDSQ 178 >sp|Q6FKS8|SPB4_CANGA ATP-dependent rRNA helicase SPB4 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=SPB4 PE=3 SV=1 Length=617 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 88/361 (24%), Positives = 156/361 (43%), Gaps = 64/361 (18%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIGG--VAARDQ 332 + +KF +LI+ P+REL+ Q N + F ++ D +R L++G + RD Sbjct 74 INNSKFKKGHFYSLILAPTRELSMQIQNVVSSFLEHYPEDQYPIRSQLVVGTNEKSVRDD 133 Query 333 L-SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 + ++L+ I++GTPGR+ D + + + S +VLDEAD LL + + ++ N + Sbjct 134 VNTLLDERPQILIGTPGRVLDFLQSPSVKTSSCGMVVLDEADRLLDVSFFKDVEKILNVL 193 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P+ G + SAT+ S + F T + + V + VN + Sbjct 194 PKQRRTG------LFSATIS-------SAGTLIFKTGLR-----------NPVKITVNSQ 229 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA----VRAIKEHKMD 507 G N+P + ++K E + + + Sbjct 230 --------------------------GKNAPTTLNLFYSVMKPEEKLQNLIHIMNNIRFK 263 Query 508 QAIIFCRTKIDCDNLEQY--FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + I++ T + QY ++QQ ++ Q + +HG R++ L F + Sbjct 264 KCIVYFSTCVSVTFFYQYLKYLQQTDKTLREDLQ--VISIHGKLTTQSRRKALSTFTESL 321 Query 566 VR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARGIDI V V+ + P + ++HR GR GRA ++G AI + +E Sbjct 322 SDCILLTTDVAARGIDIPDVDLVLQIDPPTDADIFLHRCGRTGRANKIGRAIVFLNEGRE 381 Query 625 K 625 + Sbjct 382 E 382 Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 39/69 (57%), Gaps = 0/69 (0%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + P I +A+ + T +QA +IP+ DV++ + TGSGKT AF IP+++ + Sbjct 14 LQPWIKKAINVSGFDSMTPVQASTIPMFAKNKDVVVESVTGSGKTIAFVIPILEKIISEG 73 Query 69 KDQQEGKKG 77 + + KKG Sbjct 74 INNSKFKKG 82 >sp|Q5AF95|DBP4_CANAL ATP-dependent RNA helicase DBP4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP4 PE=3 SV=1 Length=765 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 89/343 (26%), Positives = 147/343 (43%), Gaps = 66/343 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALIV P+RELA Q + + KY L+ GG + + + ++I+VGTPG Sbjct 123 ALIVSPTRELAVQIFEVLTKIGKY---NTFSAGLVTGGKDVQFEKERVSR-MNILVGTPG 178 Query 349 RLDD-LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R+ L + S ++ LVLDEAD L G+ I+ + +P Q ++ S Sbjct 179 RISQHLNEAVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPTTR------QTLLFS 232 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSV---PDTV--HHVVVPVNPKTDRLWERLGKS 462 AT S V L+ + P + + + V P+++ ++V VP++ K D LW + KS Sbjct 233 AT-QSESVNDLARLSLTNPNKIGVSSDQEVSATPESLEQYYVKVPLDEKLDVLWSFI-KS 290 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 H+++ KIL + F +K Sbjct 291 HLKS-----------------------KIL-----------------VFFSSSKQVQYTY 310 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 E + Q G S + L+G K R + +F + L TD+ ARG+D Sbjct 311 ETFRTLQPG--------ISLMKLYGRHKQTSRLETTMKFSQAQHACLFATDIVARGLDFP 362 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + +V+ V P++ YVHR+GR R R G ++ ++ +E+ Sbjct 363 AIDWVVQVDCPEDAATYVHRVGRSARFGRKGKSLLMLLPSEEE 405 Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ FS++ + + ++E ++ TDIQ ++IP+ L G D++ A TGSGKT AF IPV Sbjct 47 VSQFSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPV 106 Query 61 IQ 62 I+ Sbjct 107 IE 108 >sp|Q750F8|SPB4_EREGS ATP-dependent rRNA helicase SPB4 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SPB4 PE=3 SV=2 Length=599 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 84/345 (24%), Positives = 142/345 (41%), Gaps = 58/345 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPK--LRELLIIGG--VAARDQLSV-LENGVDIV 343 +I+ P+RELA Q I+ F Y + + ++ L+IG + RD ++ LE+ I+ Sbjct 86 TIIISPTRELASQIQGVIEAFLTYYPDGEYPIKSQLLIGSNTSSVRDDVAAFLEHRPQIL 145 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 VGTPGRL D + + S +LDEAD LL + + + +P+ G Sbjct 146 VGTPGRLLDFLKMPNIKTSSCGAAILDEADKLLDMNFEKDVETILKMLPKQRRTG-LFSA 204 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 V SA F M P V +K + P ++ + + P+ Sbjct 205 TVSSAGTQVFKTG------MRNPVKVSVKTSNKAPSSLDINYIVIEPR------------ 246 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 +K + + + ++ + I++ T C + Sbjct 247 ----------------------------MKLQLLLTLLNNYRYKKCIVYLPT---CIAVT 275 Query 524 QYF--IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGID 580 ++ +Q +K LHG + R + L+RF + + L+ TDVAARGID Sbjct 276 YFYSILQHLAKLNKMDENLKLYSLHGKLLTNSRMKTLDRFTQELGKAVLLTTDVAARGID 335 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 I + V+ + P + ++HR GR GRA R G AI + +E+ Sbjct 336 IPDIDLVLQMDPPIDADIFLHRCGRAGRANRAGRAIVFLNQGREE 380 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 28/69 (41%), Positives = 41/69 (59%), Gaps = 0/69 (0%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + P I AV+ M + T +QA +IPL DV++ + TGSGKT AF IPV++ V + Sbjct 14 LQPWIRTAVDAMGYETMTPVQASTIPLFARNKDVVVESVTGSGKTVAFVIPVLERVIQDD 73 Query 69 KDQQEGKKG 77 + + KKG Sbjct 74 ANSSKLKKG 82 >sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus OX=10090 GN=Ddx52 PE=2 SV=2 Length=598 Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 84/348 (24%), Positives = 146/348 (42%), Gaps = 57/348 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI-IGGVAARDQLSVLENGVDIVVGT 346 +AL++ P+RELA Q ++ K + R +I +AA+ DI+V T Sbjct 237 RALVISPTRELASQIH---RELIKISEGTGFRIHMIHKAAIAAKKFGPKSSKKFDILVTT 293 Query 347 PGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 P RL L+ ++L+ V +LV+DE+D L G + F ++ + TS +++ Sbjct 294 PNRLIYLLKQDPPGIDLTNVEWLVVDESDKLFEDGKTGFREQLASIFLACTSP--KVRRA 351 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT ++DV++ + + V + +S +TV ++ V +T +L Sbjct 352 MFSATF-AYDVEQWCKLNLDNVVSVSIGARNSAVETVEQELLFVGSETGKL--------- 401 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + ++ + G P ++F ++ L Sbjct 402 ----LAMRELVKKGFKPP--------------------------VLVFVQSIERAKELFH 431 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 I +G D +H +R +R + F+ G + LICT + ARGID GV Sbjct 432 ELIYEGINVD---------VIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGV 482 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 VIN P Y+HRIGR GRA G A++ + + + V + Sbjct 483 NLVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVAN 530 Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 38/56 (68%), Gaps = 0/56 (0%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 E + + Q + + + +PT IQ ++IP++L G ++L +A TGSGKT AFSIP++ Sbjct 170 EYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPIL 225 >sp|Q0UG00|MS116_PHANO ATP-dependent RNA helicase MSS116, mitochondrial OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=MSS116 PE=3 SV=1 Length=550 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 98/352 (28%), Positives = 149/352 (42%), Gaps = 63/352 (18%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPG 348 L+V P+RELA Q + K+ GG + L NG I+V TPG Sbjct 148 LVVCPTRELALQIAKECNGVTACLPR-KMECHTAFGGTSRASNLKAFLNGNPTILVATPG 206 Query 349 RLDDLVSTGKLN--LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 RLDD++ + + ++ +VLDEAD +L G++ + ++ +IP SDG Q + Sbjct 207 RLDDILGEEHVRERFTHLKTVVLDEADQMLDAGFAPAVKKILRRIPP-KSDG--WQGMCF 263 Query 407 SATL--HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SATL D+ K I+ FP + L D P+ V P +R+ Sbjct 264 SATLPKEVLDIAK----IVLFPGFTHLTTVD--PNEV--------PTHERV--------- 300 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI--KEHKMD----QAIIFCRTKID 518 P+ + + + A+ A+ +EHK D +AI+F T Sbjct 301 -----------------PQYFLSVPNVGQTFAALSALIQEEHKQDPTDFKAIVFGTTANG 343 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 L Y + + P QF LH R + +FK+ L +DV RG Sbjct 344 VGLL--YDLYKHALP-----QFRVFELHSRMSQPMRTRTTAQFKEATSGILFASDVVGRG 396 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 +D V V+ + LP + YVHR+GR RA + G A+ LV EKE + + Sbjct 397 MDFPNVGLVVQLGLPSSTEQYVHRVGRTARAGKDGRAV-LVLFEKEAFFPRI 447 >sp|Q2GZU7|DBP7_CHAGB ATP-dependent RNA helicase DBP7 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP7 PE=3 SV=1 Length=806 Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 97/370 (26%), Positives = 154/370 (42%), Gaps = 71/370 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+I+ P+REL +Q +++ + P L +IGG + + + + + GV+I++ TPG Sbjct 229 AIIMAPTRELCKQISVVLEKVLRCA--PWLVCTTVIGGESKKSEKARIRKGVNILIATPG 286 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM-----HNQIPQVTSDG---- 398 RL D L +T LN+ VR+LVLDE D ++ G+ D I + +++ +V ++G Sbjct 287 RLADHLDNTKVLNVGTVRWLVLDEGDRMMEMGFEDDIKTIVGKIRADKLEKVNAEGVVLD 346 Query 399 ----KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 R ++CSAT+ +V+KL GE S+ D +H + D Sbjct 347 GVLPSRRVTVLCSATM-KMNVQKL--------------GEISLEDAIHIMAAKSESDGDA 391 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF-- 512 S ++ + R I +LK +A R + +AIIF Sbjct 392 DAVFAAPSQLKQSCIVTPAKLR--------LVTLIALLKSTFARRG----SVMKAIIFIS 439 Query 513 CRTKI--------DCDNLEQYFIQQGGGPDKKGHQFSCVC-----------------LHG 547 C + D +E D+ H + V LHG Sbjct 440 CADSVDFHYQLLKDTKAVEPPTPDSSSTKDRNPHTDTTVARAAYITSPANPKVMLHKLHG 499 Query 548 DRKPHERKQNLERFKK-GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 R L F D LI TD+++RG+D+ V VI ++VHRIGR Sbjct 500 SLAQPVRSATLNAFSACKDPAVLITTDISSRGLDVPAVDLVIEYDPAFAVPDHVHRIGRT 559 Query 607 GRAERMGLAI 616 RA R G A+ Sbjct 560 ARAGRAGKAV 569 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/80 (34%), Positives = 45/80 (56%), Gaps = 3/80 (4%) Query 4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIPVI 61 F +GV +AQ + +++ PT IQ ++P LI G D + AETGSGKT A+ +P++ Sbjct 143 FHSLGVSRRVAQHLATKLEMKAPTAIQKNTVPQLINGDSDAFLQAETGSGKTLAYLLPIV 202 Query 62 QIVYETLKDQQEGKKGKTTI 81 + +L ++G T + Sbjct 203 HRIM-SLSLNEDGTPKDTKV 221 >sp|Q8SR01|DBP4_ENCCU ATP-dependent RNA helicase DBP4 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=DBP4 PE=3 SV=2 Length=449 Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 89/338 (26%), Positives = 141/338 (42%), Gaps = 61/338 (18%) Query 291 IVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRL 350 ++ P+RELA Q + + + KY L LI+GG+ A D+L + N ++I+V TPGRL Sbjct 78 VITPTRELALQIFDVLSRIAKY---TVLSTGLIMGGLEAEDELLKV-NQMNILVCTPGRL 133 Query 351 -DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT 409 L L+ + V+ L+LDEAD ++ G+ + + + IPQ + Q ++ SAT Sbjct 134 LQHLQENPYLSTANVQILILDEADKMIEMGFKEVLEDILEYIPQ------KKQTLLFSAT 187 Query 410 LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 + + L + P + + E+ P + +RT D Sbjct 188 PKASTARILK---LEDPRIISIYKEEGFPSQLRQYFY----------------MMRTGDK 228 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ 529 +T G+N PE +KG KE K ++F R K+ Sbjct 229 INYLHTFIGSN-PE--------VKGIVFFSTCKEVKF-HCLLFERLKL------------ 266 Query 530 GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN 589 + CL G +R +RF K L CTD+ +RG+D V VI Sbjct 267 ---------RNRIFCLSGGMSQKQRIDVFKRFVKEKNGILFCTDLGSRGLDFPKVDVVIQ 317 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 P + YVHR+GR R G + + +EK+ Sbjct 318 YDCPCNVETYVHRVGRTARNSERGESYVYLVHGEEKLL 355 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 18/59 (31%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F ++ + I + + E ++ ++Q + IP+ L G D++ +++TG+GKT AF +P +Q Sbjct 3 FEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQ 61 >sp|Q03532|HAS1_YEAST ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HAS1 PE=1 SV=1 Length=505 Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 79/333 (24%), Positives = 151/333 (45%), Gaps = 57/333 (17%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 KF P N +++ P+RELA Q ++ ++ ++IGG R + L G Sbjct 108 KFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQ---TFGIVIGGANRRQEAEKLMKG 164 Query 340 VDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 V++++ TPGRL D L +T ++ L++DEAD +L G+ D + ++ +P ++ Sbjct 165 VNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILP---NED 221 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++ + + T D+ ++S + P +++ V P+TD Sbjct 222 RQSMLFSATQTTKVEDLARIS--LRPGPLFIN-----------------VVPETD----- 257 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 ++T G + ++ K ++ +K ++ + I+F + Sbjct 258 --------------NSTADGLEQGYVVCDSDKRFLLLFSF--LKRNQKKKIIVFLSS--- 298 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 C+++ +Y+ + D + LHG +K +R F + LICTDVAARG Sbjct 299 CNSV-KYYAELLNYID-----LPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARG 352 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +DI V ++I PD+ ++Y+HR+GR R + Sbjct 353 LDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTK 385 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+ + +A+E+M + T +QA +IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 103 Query 64 VY 65 ++ Sbjct 104 LH 105 >sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=ROK1 PE=3 SV=2 Length=550 Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 46/122 (38%), Positives = 67/122 (55%), Gaps = 8/122 (7%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +H +R P +R + ++RFK GD+ LI TDV ARG+D GV VIN +P Q YVHRI Sbjct 390 VIHAERTPKQRDEVIKRFKSGDIWVLITTDVIARGVDFKGVNLVINYDVPQSAQAYVHRI 449 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCS-SRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 GR GR + G A++ E +K + + + GC + G + W +M LS+ Sbjct 450 GRTGRGGKAGKAVTFFTKEDDKAVKPIINVMKQSGC-------ESGYSGWLEDMHKLSKN 502 Query 663 EE 664 E+ Sbjct 503 EK 504 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/162 (27%), Positives = 83/162 (51%), Gaps = 14/162 (9%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGT 346 + LI+ P+ ELA Q + K K++ ++ +A + ++ + DI+V T Sbjct 189 RGLIISPTNELAVQIFQELNTMTK---GKKMKIGILSKQLANKINNKIINSSKYDILVST 245 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD--GKRLQVI 404 P RL D + ++LS+V LV+DE D L QG+ + Q ++ S+ +L+ Sbjct 246 PLRLIDSIKNETISLSKVEQLVIDETDKLFDQGFVE-------QTDEILSNCTNTKLRKS 298 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + SAT+ S V+++++ IM P V + +++ +T+ +V Sbjct 299 MFSATIPS-GVEEMAQSIMKDPIRVIIGHKEAASNTIEQKLV 339 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 2/83 (2%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKD-QQEGKKGKTTIKT 83 PT IQ E+IP+ L G D++ A TGSGKT AF IP++Q + ++ + + G +G T Sbjct 137 PTPIQDEAIPISLEGRDLIACAPTGSGKTLAFLIPLVQTILQSNPNVKNYGIRGLIISPT 196 Query 84 GASVLNKWQ-MNPYDRGSAFAIG 105 + +Q +N +G IG Sbjct 197 NELAVQIFQELNTMTKGKKMKIG 219 >sp|Q6CK32|DBP7_KLULA ATP-dependent RNA helicase DBP7 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP7 PE=3 SV=1 Length=740 Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 94/349 (27%), Positives = 150/349 (43%), Gaps = 45/349 (13%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL+V P+RELA Q + + L L+IGG + + + L G + ++GTPG Sbjct 228 ALVVTPTRELANQIYQVTSELAQCCHF--LVPCLLIGGERKKSEKARLRKGANFIIGTPG 285 Query 349 RLDDLVSTGKLNLSQ----VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG------ 398 R+ D + K+ Q +R++VLDE D L+ G+ + + + N I + D Sbjct 286 RVLDHLQNTKVIKEQLAPSLRYVVLDEGDKLMELGFEETLKEILNIIHGIDIDTHQFPKL 345 Query 399 -KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED----SVPDTVHHVVVPVNPKTD 453 KR+ ++CSAT+ +V KL + + + +VPD + +V V PK Sbjct 346 PKRILHVLCSATVKG-NVTKLGNVTLQNYKLISSGQKQTETTTVPDQLLQKIVIVPPKL- 403 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE--HK---MDQ 508 RL L S H K+ ++ ++ + Y V + + H+ D Sbjct 404 RLVT-LAGSLTTITQKHYKEGSKSDVTRTIVFLSCSDSVDFHYEVFSSHDGNHRGLVGDT 462 Query 509 AIIFCR--TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF----- 561 A + + + + C N D C LHG R L+ F Sbjct 463 ARLLTKGNSILPCFN------------DTDDPNVICYKLHGSLSQQTRTATLKHFATNND 510 Query 562 -KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 KG L CTDVA+RG+D+ V VI + P ++++HRIGR RA Sbjct 511 ATKGKHLILFCTDVASRGLDLPHVSTVIEMDPPFAVEDHLHRIGRTARA 559 Score = 37.0 bits (84), Expect = 0.73, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (61%), Gaps = 1/41 (2%) Query 25 PTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVIQIV 64 PT IQ IP L D+ + A+TGSGKT AF +P+ Q + Sbjct 173 PTKIQKLVIPPFLQAQNDLFIHAQTGSGKTLAFLLPIFQSI 213 >sp|Q3SZ40|DDX56_BOVIN Probable ATP-dependent RNA helicase DDX56 OS=Bos taurus OX=9913 GN=DDX56 PE=2 SV=1 Length=546 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 97/360 (27%), Positives = 155/360 (43%), Gaps = 61/360 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD---QLSVLENGVD 341 A +AL++ P++ELA Q + I+Q Y R++ + AA D Q +VL D Sbjct 81 QAVRALVLVPTKELARQAQSMIQQLAAYCA----RDIRVANVSAAEDSASQRAVLMEKPD 136 Query 342 IVVGTPGRLDDLVSTGKLNL-SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 +VVGTP R+ + + L L + LV+DEAD L S G+ + + + +P++ Sbjct 137 VVVGTPSRILNHLQQDNLKLRDSMELLVVDEADLLFSFGFEEELKSLLCHLPRI------ 190 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK-GEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q + SAT + DV+ L E ++H P + L+ + PD + V + D+ Sbjct 191 YQAFLMSATFNE-DVQALKELVLHNPVTLKLQESQLPGPDQLQQFQVVCETEEDKFLLLY 249 Query 460 ---------GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH---KMD 507 GKS + + + R E +S +L GE +R+ + H + + Sbjct 250 ALLKLSLIRGKSLLFVNTLERSYRLRLFL---EQFSIPACVLNGELPLRS-RCHIISQFN 305 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 Q C D + L GP KG R + +R K D Sbjct 306 QGFYDCVIATDAEVL---------GPPVKGKH--------------RGKGPKRDKASDPE 342 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV-ATEKEKV 626 + ARGID H V V+N LP + Y+HR GR RA G+ ++ V TE+ ++ Sbjct 343 AGV-----ARGIDFHHVCAVLNFDLPPTPEAYIHRAGRTARANNPGIVLTFVLPTEQSQL 397 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 29/61 (48%), Positives = 42/61 (69%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + QAV ++ W PT IQ ++IPL L G D+L A TGSGKT A++IP++Q+ Sbjct 9 FEHMGLDHRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQL 68 Query 64 V 64 + Sbjct 69 L 69 >sp|A5E2Z9|HAS1_LODEL ATP-dependent RNA helicase HAS1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=HAS1 PE=3 SV=1 Length=559 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 66/330 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +I+ P+RELA Q +Q +Y ++IGG R + + L GV+++V Sbjct 164 NGTAVIIITPTRELALQIFGVARQLMEYHSQTCG---IVIGGADRRQEATKLAKGVNLLV 220 Query 345 GTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 TPGRL D L +T ++ LV+DEAD +L G+ + + ++ +P ++ ++ + Sbjct 221 ATPGRLLDHLKNTQGFVFLNLKALVIDEADRILEIGFEEEMKQIIKILP---NEDRQTML 277 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + T D+ ++S + P ++ VVP Sbjct 278 FSATQTTKVEDLARISLR----------------PGPLYINVVP---------------- 305 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 DV D G + S+ +L + R IK+ + I+F + C++++ Sbjct 306 --EKDVSTADGLEQGYVVCD--SDKRFLLLFSFLKRNIKK----KIIVFLSS---CNSVK 354 Query 524 QY-----FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 Y +I + LHG +K +R F L+CTDVAARG Sbjct 355 FYSELLNYID-----------LPVLDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARG 403 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +DI V ++I PD+ ++Y+HR+GR R Sbjct 404 LDIPAVDWIIQFDPPDDPRDYIHRVGRTAR 433 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 0/51 (0%) Query 15 QAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 +A++EM + T +QA++IP +L G DVL AA+TGSGKT AF +P ++++Y Sbjct 106 KAIKEMGFQKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAVELLY 156 >sp|Q8SR49|SPB4_ENCCU ATP-dependent rRNA helicase SPB4 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=SPB4 PE=3 SV=1 Length=463 Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 90/348 (26%), Positives = 144/348 (41%), Gaps = 72/348 (21%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+RELA Q I++ D ++ IGG++ + ++ I VGTPG Sbjct 79 AVVITPTRELALQ----IREVAGLFD---VKCECFIGGMSIEEDYKRMKEEFSIAVGTPG 131 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 RL ++V S + LVLDEAD LL G+ + + ++ ++P+ G + SA Sbjct 132 RLLEIVGKETKKFSSLSHLVLDEADKLLGFGFEEKLMQLLAKLPRNRVTG------LFSA 185 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 T + V KLS + P +++ G + +P + ++VV K L + Sbjct 186 TRND-SVDKLSRVFLRNPVSINV-GNNEMPVALEYIVVSPMEKLLVLMD----------- 232 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 I+ G + I+F T + D + Sbjct 233 ----------------------IVTGR------------RCIVFFATCSEVDFFSGLVSR 258 Query 529 QGGGPDKKGHQFSCVC-LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 G F +C +HG ER + E F + D L CTDVAARGID GV V Sbjct 259 AG---------FGNICKIHGKISQDERNRVYEEFFQRD-GLLFCTDVAARGIDFRGVDLV 308 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 ++ +P E + VHR GR R G ++ L E+ + +G Sbjct 309 VHFDVPKEYSSIVHRSGRTARNGSKGESV-LFVMPNERAYVEFLKLKG 355 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 22/69 (32%), Positives = 41/69 (59%), Gaps = 3/69 (4%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 + + +EE + T++Q + IP +L G DV++ + TG+GKT AF P++ +Y+ + Sbjct 15 LKKEIEENGFGKMTEVQLKCIPEVLKGKDVVVQSPTGTGKTMAFLAPILSCIYD---GKG 71 Query 73 EGKKGKTTI 81 G+ G T + Sbjct 72 RGRPGVTAV 80 >sp|A3LT90|MRH4_PICST ATP-dependent RNA helicase MRH4, mitochondrial OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=MRH4 PE=3 SV=2 Length=593 Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 102/403 (25%), Positives = 173/403 (43%), Gaps = 93/403 (23%) Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL------NNIK-QFKKYIDNPKLRE 320 K + S NAQ+ K++++ P+ +L EQ N+IK +K N +L+E Sbjct 226 KYRASRNAQMV---------KSVVLVPTHDLVEQVYSTLERANSIKFDVEKIGANSRLKE 276 Query 321 LLIIGGVAARDQLSVLENG----------------VDIVVGTPGRLDDLVSTGKLN---- 360 L + LS+L+ G VD++V TPG+L L +N Sbjct 277 FLQLPEQNGSLNLSILKWGSGEAHKKLFDRCLKGRVDVLVTTPGKLASLSKLQNVNRPYR 336 Query 361 -LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 L+ V + VLDEAD L+ + + + +P + K +I+CSAT+ K+ Sbjct 337 FLNHVEYCVLDEADTLMDESW------IETTMPVIEKFKKLRDLIICSATIP----KRFQ 386 Query 420 EKIMH-FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 + FPT +DS+ + V P +L +++ S I ++ Sbjct 387 TTLNRIFPT------DDSIINIV-------TPSLHKLPKQIKVSVIDSEL---------- 423 Query 479 ANSPEMWSEAIKILKGEYAVR--AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 SP S+ + + YA+ + + + I+F K ++L + +K Sbjct 424 --SPYHGSKTRALAQALYAITRDGTEPGLVKRVIVFVNKKESVNSLVDTLV------NKF 475 Query 537 GHQFSCVC-LHGDRKPHERKQNLERFKK-----------GDVRFLICTDVAARGIDIHGV 584 H+ V + G+ KP ER + LE F K ++ L+ +D+ ARG++ G+ Sbjct 476 SHRPEDVIGITGEDKPEERSEKLEPFIKPAESIEEDPLNSKIKVLVTSDLMARGVNFVGI 535 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 VI + +P + VHRIGR GR + G I +V +K K W Sbjct 536 KNVIIMDIPHNSVDLVHRIGRTGRMNQSGRVILIVDKKKNKAW 578 >sp|A2Q9T6|HAS1_ASPNC ATP-dependent RNA helicase has1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=has1 PE=3 SV=1 Length=606 Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 90/337 (27%), Positives = 143/337 (42%), Gaps = 63/337 (19%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N L+V P+RELA Q ++ + ++IGG R + Sbjct 187 LSALRFKPRNGTGVLVVSPTRELALQIFGVARELMAHHSQTYG---IVIGGANRRAEAEK 243 Query 336 LENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV++++ TPGRL D L +T ++ LV+DEAD +L G+ D + ++ +P Sbjct 244 LTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILP-- 301 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 + Q ++ SAT + V+ L+ R Sbjct 302 ---SEERQTMLFSAT-QTTKVEDLA----------------------------------R 323 Query 455 LWERLGKSHIRTDDVHAKD-NTRPGANSPEMWSEAIK--ILKGEYAVRAIKEHKMDQAII 511 + R G +I D H K+ +T G + EA K +L + R +K + II Sbjct 324 ISLRPGPLYINVD--HRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLK-----KKII 376 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 + +C + P + LHG +K +R F LIC Sbjct 377 VFFSSCNCVKYHAELLNYIDLP--------VLELHGKQKQQKRTNTFFEFCNAKQGTLIC 428 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 TDVAARG+DI V ++I PD+ ++YVHR+GR R Sbjct 429 TDVAARGLDIPAVDWIIQFDPPDDTRDYVHRVGRTAR 465 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 42/61 (69%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + + + +++M + T+IQ +IP +L G DVL AA+TGSGKT +F IP +++ Sbjct 127 FTELNLSEKTMKGIQDMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEM 186 Query 64 V 64 + Sbjct 187 L 187 >sp|Q7S873|DBP7_NEUCR ATP-dependent RNA helicase dbp-7 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-7 PE=3 SV=1 Length=814 Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 103/390 (26%), Positives = 159/390 (41%), Gaps = 76/390 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+I+ P+REL +Q +++ + P L +IGG + + + + + GV+I++ TPG Sbjct 233 AIILAPTRELCKQIAVVLEKVLRCA--PWLVCTTVIGGESKKSEKARIRKGVNILIATPG 290 Query 349 RLDD-LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RL D L +T L++ VR+LVLDE D ++ G+ D I + +I T K + +V Sbjct 291 RLTDHLDNTKVLDVGTVRWLVLDEGDRMMEMGFEDDIKTIVGKIRAGTLQKKNAEGVVLD 350 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 L S V L M V GE S+ D VH KS + D Sbjct 351 GVLPSRRVTVLCSATMKM--NVQKLGEISLEDAVHITA--------------SKSDMEKD 394 Query 468 DVHAKDNTRPGANSPEMWSEA-------------IKILKGEYAVRAIKEHKMDQAIIFCR 514 T ++P +A I +LK +A ++ + +AIIF Sbjct 395 AETGAVET--AFSAPAQLKQAAIVTPAKLRLVTLIALLKSTFA----RKGSVMKAIIF-- 446 Query 515 TKIDCDNLEQYFIQ---------------QGGGPDKKG-HQFSCVC-------------- 544 I C + Y + +G P K H S V Sbjct 447 --ISCADSVDYHFELLKSTTPRAEPEPKPEGEAPTKPNIHIESTVAPATYITSPANPTVM 504 Query 545 ---LHGDRKPHERKQNLERFKK-GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 LHG R L+ F + D LI TD+++RG+D+ V VI ++V Sbjct 505 LHKLHGSLAQPVRSATLKAFSECKDPAVLITTDISSRGLDVPAVELVIEYDPAFAVPDHV 564 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHV 630 HRIGR RA R G A+ + E+ + + Sbjct 565 HRIGRTARAGRAGKAVLFLLPGSEEGYISI 594 Score = 38.9 bits (89), Expect = 0.20, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 43/80 (54%), Gaps = 3/80 (4%) Query 4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIPVI 61 F +G+ ++Q + +++ PT IQ +IP L+ D + AETGSGKT A+ +P++ Sbjct 147 FLSLGLSRRVSQHLATKLEMKAPTAIQKNTIPQLVKEDSDAFLQAETGSGKTLAYLLPIV 206 Query 62 QIVYETLKDQQEGKKGKTTI 81 + L ++G T + Sbjct 207 HRIL-ALSHNEDGTPKTTKV 225 >sp|Q9NUL7|DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28 OS=Homo sapiens OX=9606 GN=DDX28 PE=1 SV=2 Length=540 Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 97/359 (27%), Positives = 155/359 (43%), Gaps = 83/359 (23%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII--------GGVAARDQLSVLE 337 AP+ L++ PSRELA+Q + + P R L ++ G R QLS + Sbjct 203 APRGLVLVPSRELAQQV--------RAVAQPLGRSLGLLVRDLEGGHGMRRIRLQLS-RQ 253 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVT 395 D++V TPG L + + ++L Q+ FLVLDEAD LL + + + ++ + + I + Sbjct 254 PSADVLVATPGALWKALKSRLISLEQLSFLVLDEADTLLDESFLELVDYILEKSHIAEGP 313 Query 396 SD-----GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV-DLKGEDSVPDTVH------- 442 +D + Q+++ AT FP V L + + PD V Sbjct 314 ADLEDPFNPKAQLVLVGAT---------------FPEGVGQLLNKVASPDAVTTITSSKL 358 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 H ++P H++ + K GA+ +E + ILK + RA + Sbjct 359 HCIMP---------------HVKQTFLRLK-----GADK---VAELVHILK--HRDRAER 393 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 ++FC + + L Y + H+ + L G R + F+ Sbjct 394 TGPSGTVLVFCNSSSTVNWLG-YILDD--------HKIQHLRLQGQMPALMRVGIFQSFQ 444 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR--AERMGLAISLV 619 K L+CTD+A+RG+D GV V+N P Q+Y+HR GRVGR +E G IS V Sbjct 445 KSSRDILLCTDIASRGLDSTGVELVVNYDFPPTLQDYIHRAGRVGRVGSEVPGTVISFV 503 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 39/56 (70%), Gaps = 2/56 (4%) Query 3 AFSEMGVMPEIAQAVEEM--DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 +F+++G+ P + A++E + + PT +Q+ +IP +L G V+ AAETGSGKT ++ Sbjct 127 SFADLGLEPRVLHALQEAAPEVVQPTTVQSSTIPSLLRGRHVVCAAETGSGKTLSY 182 >sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CHR1 PE=3 SV=2 Length=578 Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 46/122 (38%), Positives = 68/122 (56%), Gaps = 8/122 (7%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +H +R P +R++ ++RFK GD+ LI TDV ARG+D GV VIN +P Q YVHRI Sbjct 407 VIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVINYDVPQSAQAYVHRI 466 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCS-SRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 GR GR + G A++ E +K + + + GC + G + W +M LS+ Sbjct 467 GRTGRGGKAGKAVTFFTKEDDKAIKPILNVMKQSGC-------NDGYSQWMEDMGKLSKK 519 Query 663 EE 664 E+ Sbjct 520 EK 521 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 81/167 (49%), Gaps = 23/167 (14%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV------D 341 + LI+ P+ ELA Q ++ + I + ++ S L N + D Sbjct 205 RGLIISPTNELAVQIFQELEIITRGCKQ-------INVAILSKQLASKLNNNIIKSSKYD 257 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVTSDGK 399 I+V TP RL D+V G ++LS++ L++DEAD L G+++ + + H P++ Sbjct 258 IIVSTPLRLIDVVKQGNMDLSKIEQLIIDEADKLFDHGFAEQTDEILTHCTNPKIRKS-- 315 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + SAT+ S V++++ IM P + + +++ +T+ +V Sbjct 316 -----IFSATIPS-SVEEMAHSIMKDPLRIIIGHKEAASNTIDQKLV 356 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 0/57 (0%) Query 21 DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 +++ PT IQ ESIP+ L D++ A TGSGKT AF IP++Q + + G +G Sbjct 150 EFVEPTPIQCESIPITLNNRDLIACAPTGSGKTLAFLIPLVQQILSKNVSKNHGIRG 206 >sp|Q6K7R9|RH48_ORYSJ DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0826100 PE=2 SV=1 Length=811 Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 93/360 (26%), Positives = 162/360 (45%), Gaps = 65/360 (18%) Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR-DQ 332 NA + T + +LI+ P+RELA Q KY ++ L IGG + DQ Sbjct 406 NAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGIGVQSL--IGGTRFKLDQ 463 Query 333 LSVLENGVDIVVGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 + + I+V TPGRL D + S+ + L ++ LVLDEAD LL G+ I ++ + Sbjct 464 RRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADHLLDLGFRTDIEKIVD 523 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 +P ++ Q ++ SAT+ +V+++S+ + LK + DTV V Sbjct 524 SLP------RQRQTLLFSATIPK-EVRRVSQLV--------LKRDHVFVDTVGLGAVETP 568 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ- 508 K ++L+ + ++H R ++EH +DQ Sbjct 569 TKVEQLY------LVMPHELHF-----------------------HMVYRLLREH-IDQE 598 Query 509 ----AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 I+FC T + + + Y + + + + +H + R + E F+ Sbjct 599 VDYKVIVFCTTAMVTEFM--YIML-------RDLKLNVREIHSRKPQLYRTRISEEFRDS 649 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ +DV+ RG++ GV VI V +P ++++Y+HR+GR GR + G I L+A +E Sbjct 650 SRLILVTSDVSTRGVNYPGVTLVIQVGVPSDREHYIHRLGRTGREGKSGKGILLLAPWEE 709 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 0/66 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E G+ P +A+ + ++ T +Q ++P+ L G DVL+ A+TG+GK+ AF +P I+ Sbjct 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIES 403 Query 64 VYETLK 69 V +K Sbjct 404 VLNAMK 409 >sp|Q6BXG0|DBP4_DEBHA ATP-dependent RNA helicase DBP4 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP4 PE=3 SV=2 Length=766 Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 85/342 (25%), Positives = 150/342 (44%), Gaps = 66/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q + + K+ + L+ GG + + + + ++I+VGTPG Sbjct 121 ALIISPTRELAVQIFEVLVKIGKHNN---FSAGLVTGGKDVKYEKERV-SKMNILVGTPG 176 Query 349 RLDD-LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R+ L + + S ++ LVLDEAD L G+ I+ + +P Q ++ S Sbjct 177 RISQHLNESVGMETSNLQVLVLDEADRCLDMGFKKQIDNILGHLPPTR------QTLLFS 230 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGE---DSVPDTV--HHVVVPVNPKTDRLWERLGKS 462 AT S VK L+ + P V + + + P+++ +++ +P++ K D LW + KS Sbjct 231 AT-QSDSVKDLARLSLANPKRVGISSDQELSATPESLEQYYIKIPLDEKLDVLWSFI-KS 288 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 H+++ KIL + F +K Sbjct 289 HLKS-----------------------KIL-----------------VFFSSSKQVQYAY 308 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 E + Q G S + L+G K R + +F + L TD+ ARG+D Sbjct 309 ETFRTLQPG--------ISLLKLYGRHKQTSRMETTMKFSQAQHACLFATDIVARGLDFP 360 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + +V+ + P++ YVHR+GR R R G ++ ++ +E Sbjct 361 AIDWVVQIDCPEDAATYVHRVGRAARFGRAGKSLMMLLPSEE 402 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 27/62 (44%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ FS++ + E A+ ++E + TDIQ ++IP+ L G DV+ A+TGSGKT AF IP Sbjct 45 ISQFSDLPISEETARGLKEASFASLTDIQKKTIPISLKGEDVMGTAKTGSGKTLAFLIPT 104 Query 61 IQ 62 I+ Sbjct 105 IE 106 >sp|Q9FNM7|RH26_ARATH DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana OX=3702 GN=RH26 PE=1 SV=2 Length=850 Score = 88.6 bits (218), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 99/356 (28%), Positives = 151/356 (42%), Gaps = 77/356 (22%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA-ARDQLSVLENGVDIVVGTPG 348 L+V P+RELA Q KY +P + ++IGG +Q + N I+V TPG Sbjct 462 LVVCPTRELASQAAAEANTLLKY--HPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPG 519 Query 349 RLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 RL D + S L V+ LVLDEAD LL G+ I R+ +P K+ Q + Sbjct 520 RLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVP------KQRQTFL 573 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT V + +I H V LK + + V E G++H + Sbjct 574 FSAT-----VPEEVRQICH----VALKRDHEFINCVQ--------------EGSGETHQK 610 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI--KEHKMD----QAIIFCRT---- 515 ++ I L +++ + KEH D + IIFC T Sbjct 611 VTQMYM-----------------IASLDRHFSLLHVLLKEHIADNVDYKVIIFCTTAMVT 653 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE-RKQNLERFKKGDVRFLICTDV 574 ++ D L Q + +H RKP R + + F+K L+ +DV Sbjct 654 RLVADLLSQL-------------SLNVREIHS-RKPQSYRTRVSDEFRKSKAIILVTSDV 699 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 +ARG+D V V+ + LP +++ Y+HR+GR GR + G + L+A +E V Sbjct 700 SARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSV 755 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/64 (36%), Positives = 40/64 (63%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P +A+++ + T +Q ++P+IL G DVL A+TG+GKT AF +P I+ Sbjct 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443 Query 64 VYET 67 V ++ Sbjct 444 VIKS 447 >sp|Q6ZPL9|DDX55_MOUSE ATP-dependent RNA helicase DDX55 OS=Mus musculus OX=10090 GN=Ddx55 PE=1 SV=2 Length=600 Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 91/353 (26%), Positives = 152/353 (43%), Gaps = 57/353 (16%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV-AARDQLSVLE 337 + K N A+++ P+RELA Q + F K+ P+ ++L IGG D + Sbjct 75 EEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHF--PQFSQILWIGGRNPGEDVERFKQ 132 Query 338 NGVDIVVGTPGRLDDLVSTGK--LNLSQ----VRFLVLDEADGLLSQGYSDFINRMHNQI 391 +G +I+V TPGRL+D+ L+L+ + LVLDEAD LL G+ IN + + Sbjct 133 HGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFL 192 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P+ G + SAT + +V+ L + P + +K + + Sbjct 193 PKQRRTG------LFSAT-QTQEVENLVRAGLRNPVRISVKEKGVAASS----------- 234 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 T + RL +N + E +++ + L+ + ++ ++ Sbjct 235 TQKTPSRL-------------ENHYMICKADEKFNQLVHFLRS---------RQQEKHLV 272 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T C +E Y G + + +C+HG K ++R + F+K L+C Sbjct 273 FFST---CACVEYY----GKALEALLKKVKILCIHGKMK-YKRNKIFMEFRKLQSGILVC 324 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 TDV ARGIDI V +V+ P +VHR GR R G A+ + +E Sbjct 325 TDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEE 377 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 3/67 (4%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY---ET 67 P + A+ E+ + T +Q+ +IPL + DV A TGSGKT AF IP+++I+ E Sbjct 18 PRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEK 77 Query 68 LKDQQEG 74 LK Q G Sbjct 78 LKKNQVG 84 >sp|Q9FFQ1|RH31_ARATH DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana OX=3702 GN=RH31 PE=2 SV=2 Length=716 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 94/349 (27%), Positives = 150/349 (43%), Gaps = 73/349 (21%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA-ARDQLSVLENGVDIVVGTP 347 AL++ P+RELA Q KY +P + ++IGG +Q + N I+V TP Sbjct 327 ALVICPTRELANQAATEANTLLKY--HPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATP 384 Query 348 GRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GRL D + L V+ LVLDEAD LL G+ I R+ + +P K Q Sbjct 385 GRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVP------KERQTF 438 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ +V+++ V L+ + + VH + ++H Sbjct 439 LFSATVPE-EVRQI--------CLVALRRDHEFVNCVHEGTI--------------ETHQ 475 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD----QAIIFCR----TK 516 + +H M + + Y + ++EH M + I+FC TK Sbjct 476 QVRQMH-------------MIASLDRHFSLLYTL--LREHIMGNVDYKVIVFCTTAMVTK 520 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE-RKQNLERFKKGDVRFLICTDVA 575 + D L + + +H RKP R + F+K L+ +DV+ Sbjct 521 LVADLLGEL-------------NLNVREIHS-RKPQSYRTRVSNEFRKSKGLILVTSDVS 566 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ARG+D V V+ V LP +++ Y+HR+GR GR + G I L+A +E Sbjct 567 ARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLAPWEE 615 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/73 (33%), Positives = 43/73 (59%), Gaps = 0/73 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + P +A+++ + T +Q ++P+IL G DVL A+TG+GKT AF +P I++ Sbjct 250 FDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEV 309 Query 64 VYETLKDQQEGKK 76 V ++ + K+ Sbjct 310 VVKSPPTSPDNKR 322 >sp|A1DE84|DBP7_NEOFI ATP-dependent RNA helicase dbp7 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp7 PE=3 SV=1 Length=758 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 97/371 (26%), Positives = 157/371 (42%), Gaps = 72/371 (19%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+++ P+REL +Q L N+ + +I +IGG + + + L G++I+V Sbjct 228 AIVLAPTRELCKQISVVLENLLRCAHWI-----VAGTVIGGEKKKSEKARLRKGLNILVA 282 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN---------RMHNQIPQVT 395 TPGRL D L +T L++S VR+LVLDE D L+ G+ + I + ++IP V Sbjct 283 TPGRLADHLDNTQALDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGVP 342 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + R I+CSATL V+KL GE S+ D VH + +P+ + Sbjct 343 T---RRTTILCSATL-KMSVQKL--------------GEISLKDAVH---IKADPEDEDE 381 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 R K V A+ + ++ + L + +++ + +AIIF Sbjct 382 KARRSKEEESAYRVPAQLKQSYAVVAAKLR---LVTLTAFFKRTFMRKGSVMKAIIFVSC 438 Query 516 KIDCDNLEQYFIQQGGGPD-----------------------------KKGHQFSCVCLH 546 D + F ++ D + + LH Sbjct 439 ADSVDFHFEVFTRKQAKEDGDESSDTDKSEDKPPSSPHGTIAPATAFSNPSNPVTLFRLH 498 Query 547 GDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 G + R L F K + LICTDVA+RG+D+ V V+ ++++HRIGR Sbjct 499 GSLPQNVRTSTLGAFAKNKEASVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGR 558 Query 606 VGRAERMGLAI 616 R R G A+ Sbjct 559 TARVGRDGRAL 569 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 39/63 (62%), Gaps = 2/63 (3%) Query 4 FSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 F+ +G+ P +A + +++ PT IQ SI +L GD + AETGSGKT A+ +P++ Sbjct 140 FTNLGLSPSLAAHLLTKLELKAPTAIQKASISQLLKEEGDAFIQAETGSGKTLAYLLPLV 199 Query 62 QIV 64 Q + Sbjct 200 QRI 202 >sp|Q6CRF4|DBP4_KLULA ATP-dependent RNA helicase DBP4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP4 PE=3 SV=1 Length=770 Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 87/348 (25%), Positives = 152/348 (44%), Gaps = 73/348 (21%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG---VAARDQLSVLENGVDIVVG 345 ALI+ P+RELA Q + + K+ L+IGG ++++S ++I++G Sbjct 116 ALIISPTRELAMQIYEVLSKIGKHT---TFSAGLVIGGKDVTFEKERIS----RINILIG 168 Query 346 TPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR L + N S ++ LVLDEAD L G+ ++ + N +P Q + Sbjct 169 TPGRILQHMDQAVGFNTSNLQLLVLDEADRCLDMGFKRTLDAIINNLPASR------QTL 222 Query 405 VCSATLHSF--DVKKLS---EKIMHFPTWVDLKGEDSVPDTVH--HVVVPVNPKTDRLWE 457 + SAT D+ +LS K + ++ + P+++ ++ VP+ K D L+ Sbjct 223 LFSATQSQSLDDLARLSLTDYKQVGTMEVLNANSSSATPESLQQSYIEVPLPDKLDILFS 282 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 + KSH+++ + I+F + Sbjct 283 FI-KSHLKS-----------------------------------------KLIVFLSSSK 300 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + + F + G S + LHG +K R + L++F + L TDV AR Sbjct 301 QVHFVYETFRKLQPG-------ISLMHLHGRQKQTARTETLDKFSRAQHVCLFSTDVVAR 353 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 GID V +VI V P++ Y+HR+GR R + G ++ ++ E+E+ Sbjct 354 GIDFPSVDWVIQVDCPEDVDTYIHRVGRAARFGKEGKSLIMLTPEEEE 401 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + ++E ++ T+IQ ESIPL L G DVL AA+TGSGKT AF IPVI+ Sbjct 43 FQDLPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEK 102 Query 64 VY 65 +Y Sbjct 103 LY 104 >sp|Q2GMX1|HAS1_CHAGB ATP-dependent RNA helicase HAS1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=HAS1 PE=3 SV=1 Length=586 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 60/331 (18%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +F P N ++V P+RELA Q ++ K N ++IGG R + L G Sbjct 178 RFKPRNGTGVIVVTPTRELALQIFGVARELMK---NHSQTYGVVIGGANIRAEEDKLGKG 234 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V++++ TPGRL D + G ++ L++DEAD +L G+ D + + +P Sbjct 235 VNLLIATPGRLLDHLRRGSFVFKNLKSLIIDEADRILEVGFEDEMRHIVKILP------- 287 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 K + + M F K ED R+ R Sbjct 288 -----------------KENRQTMLFSATQTTKVEDLA----------------RISLRP 314 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 G +I D+ + +T G + + +A K ++ +K+ + I+F + C Sbjct 315 GPLYINVDE-EKQFSTVEGLDQGYVIVDADKRFLLLFSF--LKKMAKKKIIVFLSS---C 368 Query 520 DNLEQY--FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 ++++ Y +Q + LHG +K +R F LICTDVAAR Sbjct 369 NSVKYYSELLQY--------IDLQVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAAR 420 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 G+DI V +++ PD+ ++Y+HR+GR R Sbjct 421 GLDIPQVDWIVQFDPPDDPRDYIHRVGRTAR 451 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/62 (47%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AFSE+ + + ++ EM + T+IQ IP +L G DVL AA+TGSGKT AF IP I+ Sbjct 113 AFSELNLSDKTMMSINEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIE 172 Query 63 IV 64 ++ Sbjct 173 ML 174 >sp|Q0UR48|HAS1_PHANO ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=HAS1 PE=3 SV=1 Length=610 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 85/334 (25%), Positives = 147/334 (44%), Gaps = 58/334 (17%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N ++V P+RELA Q ++ ++ ++IGG R + Sbjct 193 LSSMRFKPRNGTGVIVVSPTRELALQIFGVAREL---MEKHSQTFGIVIGGANRRAEAEK 249 Query 336 LENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV++++ TPGRL D L +T ++ L++DEAD +L G+ D M + I + Sbjct 250 LAKGVNLLIATPGRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFED---EMRSIIKIL 306 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 +D ++ + + T D+ ++S K VD + E S Sbjct 307 PTD-RQTMLFSATQTTKVEDLARISLKAGPLYINVDYRKEHST----------------- 348 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E L + ++ D +TR ++L +K+H+ + I+F Sbjct 349 -VEGLEQGYVICDS-----DTR------------FRLL-----FSFLKKHQKKKVIVFFS 385 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 + C+++ +++ + D + LHG K R F LICTDV Sbjct 386 S---CNSV-KFYAELLNYID-----LPVLELHGKLKQQARTNRFFEFCNAQSGTLICTDV 436 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 AARG+DI V +VI PD+ ++Y+HR+GR R Sbjct 437 AARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTAR 470 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+ + +A++ M + T+IQ ++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 133 FDELNLSERTMEAIKTMGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAIEM 192 Query 64 V 64 + Sbjct 193 L 193 >sp|Q9FFT9|RH32_ARATH DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana OX=3702 GN=RH32 PE=2 SV=1 Length=739 Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 88/346 (25%), Positives = 143/346 (41%), Gaps = 72/346 (21%) Query 290 LIVEPSRELAEQT---LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 +I+ P+RELA QT LN + +F K+ L+IGG D + ++I+V Sbjct 147 IIISPTRELAAQTFGVLNKVGKFHKFSAG------LLIGGREGVDVEKERVHEMNILVCA 200 Query 347 PGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 PGRL + T Q++ L+LDEAD +L + ++ + +Q+P K Q ++ Sbjct 201 PGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLP------KHRQTLL 254 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGE--DSVPDTVHHVV--VPVNPKTDRLWERLGK 461 SAT + VK L+ + P ++ + E + P ++ V VPV K D LW Sbjct 255 FSAT-QTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWS---- 309 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 IK H + ++F TK Sbjct 310 --------------------------------------FIKTHLNSRILVFLSTKKQVKF 331 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + F + G LHG +R +F + L CTDV ARG+D Sbjct 332 VHEAFNKLRPG-------IPLKSLHGKMSQEKRMGVYSQFIERQ-SVLFCTDVLARGLDF 383 Query 582 -HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 V +V+ V P++ +Y+HR+GR R G ++ + +EK+ Sbjct 384 DKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEKM 429 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + + + +++ ++ TD+Q+ +IP L G D+L AA TGSGKT AF IP+++ Sbjct 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132 Query 64 VY 65 ++ Sbjct 133 LH 134 >sp|A5DIP0|DHH1_PICGU ATP-dependent RNA helicase DHH1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DHH1 PE=3 SV=1 Length=547 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/222 (28%), Positives = 96/222 (43%), Gaps = 33/222 (15%) Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 K++QAIIFC + + L + + G +SC H R + F++G Sbjct 265 KINQAIIFCNSTNRVELLAKKITELG---------YSCYYSHAKMPQQARNKVFHEFRQG 315 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VR L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+ + + Sbjct 316 SVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINFIHWDDR 375 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 K +++ + G T +K + S+I+ L T + +DE Sbjct 376 KSLFNIETELG-----TEIKP------------IPSDIDRSLYVTEDEASIPRPFKIDEL 418 Query 685 DGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSF 726 + +KR G Y+G PT Q +A T + Sbjct 419 PKGNEHSRKR--NGYEYRGQ-----PTSQGFPQQPPQANTGY 453 Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 52/158 (33%), Positives = 82/158 (52%), Gaps = 10/158 (6%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + Q K N + LI+ P+RELA QT +K K++ KL+ ++ GG RD + L Sbjct 88 LQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKHL---KLQCMVTTGGTLLRDDVMRL 144 Query 337 ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 + V I+VGTPGR+ DL + + S+ V+DEAD +LS+ + I ++ P Sbjct 145 DEPVHILVGTPGRVLDLAARSIADFSECPMFVMDEADKMLSREFKGIIEQILEFFP---- 200 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 K Q ++ SAT VK +K ++ P ++L E Sbjct 201 --KNRQSLLFSATF-PLAVKSFMDKHLNKPYEINLMDE 235 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E G+ E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT +F IP +Q Sbjct 30 SFEEFGLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPALQ 89 Query 63 IVYETLKDQQ 72 V L Q Sbjct 90 QVKTKLNKIQ 99 >sp|Q0DBU5|RH31_ORYSJ DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0526600 PE=3 SV=2 Length=547 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 93/350 (27%), Positives = 151/350 (43%), Gaps = 75/350 (21%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV-AARDQLSVLENGVDIVVGTP 347 ++V P+RELA+Q + K+ +P + L+IGG A +Q + N I+V TP Sbjct 158 VVVVCPTRELADQAAAEANKLLKF--HPSIGVQLVIGGTRMALEQKRMHTNPCQILVATP 215 Query 348 GRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GRL D + L V+ L+LDEAD LL G+ I R+ +P K+ Q + Sbjct 216 GRLKDHMENTPGFATRLMGVKVLILDEADRLLDMGFRTDIERIVAALP------KQRQTL 269 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV---PDTVH------HVVVPVNPKTDRL 455 + SAT V ++ H DL+ ++V + H HVV P++ + L Sbjct 270 LFSAT-----VPDEVRQVCHIAMKRDLEFVNTVEEGSEETHSQVKQMHVVAPLDKQFSIL 324 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + L TD H +N +Y V I+FC T Sbjct 325 YGLL------TD--HISENV-------------------DYKV-----------IVFCTT 346 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER-FKKGDVRFLICTDV 574 + + + + + +H RKP + + + FK+ L+ +DV Sbjct 347 AKVTSLVAELLSEL---------KLNVREIHS-RKPQSYRTRISKEFKESKGLILVSSDV 396 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +ARG+D V V+ + +P +++ Y+HR+GR GR G I L+A +E Sbjct 397 SARGVDYPNVTLVVQMGVPTDREQYIHRLGRTGRRGNEGSGILLLAPWEE 446 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/61 (39%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E + P + V+ + T +Q ++P+IL G DVL A+TG+GKT AF +P I++ Sbjct 81 FDECSLSPLTLKGVKAAGYERMTAVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPAIEV 140 Query 64 V 64 V Sbjct 141 V 141 >sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=ROK1 PE=3 SV=1 Length=565 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 63/321 (20%) Query 288 KALIVEPSRELAEQTLNNIKQFKK--YIDNPKLRELLIIG---GVAARDQLSVLENGVDI 342 K LI+ P++ELA Q N + K Y+D + ++ I+ G R+++ + + D+ Sbjct 196 KGLIISPTKELATQIFNECVKLSKRIYLDKKRPLQVAILSKSLGAKLRNKV-ISDKKYDL 254 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++ TP RL D+V L+LS V+ L+ DEAD L + FI + + + T R Sbjct 255 IISTPLRLIDVVKNEALDLSNVKHLIFDEADKLFDKT---FIEQTDDILNSCTDPSMRKS 311 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ S V++ + IM+ P V + +++ + ++ + +L Sbjct 312 MF--SATIPS-SVEETANSIMNDPVRVIIGHKEAANTNIEQKLIFCGNEEGKL------- 361 Query 463 HIRTDDVHAKDNTRPGANSPE--MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + + + G P ++ E+I K Y +++ R +D Sbjct 362 ------IAIRQLVQQGEFKPPIIIFLESIARAKALY-----------HELMYDRINVDVI 404 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + E+ IQ R++ +ERFK G++ LICTDV ARGID Sbjct 405 HAERTAIQ-------------------------REKIIERFKTGELWCLICTDVLARGID 439 Query 581 IHGVPYVINVTLPDEKQNYVH 601 GV VIN +P Q YVH Sbjct 440 FKGVNLVINYDVPTTAQAYVH 460 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/42 (60%), Positives = 30/42 (71%), Gaps = 0/42 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 PT IQ E+IPL L G D+L A TGSGKT AF IP++Q + E Sbjct 147 PTPIQCEAIPLCLNGRDLLACAPTGSGKTLAFLIPLLQQIIE 188 >sp|Q1K8F7|CYT19_NEUCR ATP-dependent RNA helicase cyt-19, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cyt-19 PE=1 SV=1 Length=626 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 95/362 (26%), Positives = 152/362 (42%), Gaps = 57/362 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL-SVLENGVDIVVGT 346 +A+I+ P+RELAEQ ++ +K + + +GG L + G I+VGT Sbjct 159 RAIIISPTRELAEQIG---EEARKLVKGTGIIVQTAVGGTQKNAMLYKTRQQGCHILVGT 215 Query 347 PGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL--Q 402 PGRL+DL+S + R LVLDEAD +L G+++ + ++ N +P D K L Q Sbjct 216 PGRLNDLLSDSHSGIDAPRLSTLVLDEADRMLEVGFNEELRQIINYLP----DRKVLPRQ 271 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SAT+ DV L+ +++D + V Sbjct 272 TLLYSATIPK-DVVGLAR------SYIDKNNFEFV------------------------Q 300 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD------QAIIFCRTK 516 ++ D+V D P P E I E +A+ E + + +AI+F T Sbjct 301 TVKADEVLTHDRI-PQYIVPCKGFENIYPAMLELIEKALNESRTNPEALPFKAIVFLPTT 359 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + F + K H +H + R + + FK L +DV A Sbjct 360 AEVIMANAIFKRLQW---KFKHIPKTWDIHSKLTQNARTRAADEFKNARTGILFSSDVTA 416 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RG+D V +VI +P ++ Y+HR+GR GRA + G +V + H SR Sbjct 417 RGMDFPNVSHVIQTHIPPNREQYIHRLGRTGRANKPGQGWLIV----PDIELHAARSRLP 472 Query 637 GC 638 G Sbjct 473 GL 474 Score = 40.4 bits (93), Expect = 0.062, Method: Compositional matrix adjust. Identities = 22/65 (34%), Positives = 38/65 (58%), Gaps = 1/65 (2%) Query 1 MAAFSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 A + +GV + +A+ M + T++Q+ +I L G D++ A+TG+GKT F +P Sbjct 73 FADLAALGVHENVVRAITHGMGYENMTEVQSMTISPALKGKDIVAQAKTGTGKTLGFLVP 132 Query 60 VIQIV 64 VIQ + Sbjct 133 VIQKI 137 >sp|Q2UST1|MS116_ASPOR ATP-dependent RNA helicase mss116, mitochondrial OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=mss116 PE=3 SV=1 Length=633 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 93/344 (27%), Positives = 138/344 (40%), Gaps = 50/344 (15%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV-DIVVGTPG 348 LI+ P+RELA+Q + Q + P L + +GG A L+ G I+V TPG Sbjct 170 LIITPTRELAQQIAKSCDQLTSQLARP-LECHIAVGGTARASALARFMKGAPSILVATPG 228 Query 349 RLDDLVS--TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 RL D +S + LS ++ L+LDEAD +L G+ + R+ IP ++ Q + Sbjct 229 RLKDYLSEPSTAEKLSNIQTLILDEADTMLESGFLADVKRILQLIPPKSTG---WQGMCF 285 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT + K+ + V G S+ T+ P + ER+ + H+ Sbjct 286 SAT--------VPPKVKDVVSVVLKPGYTSI-STIEKNETPTH-------ERVPQYHVLI 329 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 V + ++ +L E K II + L Sbjct 330 PSVA------------DTFTTLASLLNLEI--------KNSSKIIVFGVTANMVALFAAA 369 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 QG P K +H R + FK+ + +DV RG+D V Sbjct 370 FSQGLTPLK------VFEIHSRLSQSARTKTTALFKEAATGIMFASDVIGRGMDFPNVDL 423 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VI V LP + YVHR+GR RA G AI L+ TE E + V Sbjct 424 VIQVGLPSNGEQYVHRVGRTARAGNDGRAIILL-TEAESFFMKV 466 >sp|Q6BJX6|DHH1_DEBHA ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DHH1 PE=3 SV=2 Length=516 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 9/116 (8%) Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 +++QAIIFC + + L + + G +SC H H R + F++G Sbjct 266 QINQAIIFCNSTNRVELLAKKITELG---------YSCYYSHAKMPQHARNKVFHEFRQG 316 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 VR L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L++ Sbjct 317 KVRVLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMS 372 Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 79/150 (53%), Gaps = 10/150 (7%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT ++ K++ L+ ++ GG + RD + L + V ++V Sbjct 97 NKIQALILVPTRELALQTSQVVRTLGKHLG---LQCMVTTGGTSLRDDILRLNDPVHVLV 153 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL S +LS+ V+DEAD +LS+ + I ++ P Q + Sbjct 154 GTPGRVLDLASRKVADLSECPLFVMDEADKMLSREFKGIIEQILAFFPTTR------QSL 207 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 + SAT VK ++ + P ++L E Sbjct 208 LFSATF-PLAVKSFMDQHLTKPYEINLMDE 236 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 35/60 (58%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ +Q ESIP+ L G D+L A+ G+GKT +F IP +Q Sbjct 31 TFEDFPLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCLQ 90 >sp|P34668|YO12_CAEEL Putative ATP-dependent RNA helicase ZK686.2 OS=Caenorhabditis elegans OX=6239 GN=ZK686.2 PE=3 SV=2 Length=593 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 98/398 (25%), Positives = 184/398 (46%), Gaps = 48/398 (12%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA--ARDQLSVLENGVDIVVG 345 +A+I+ P + L Q ++ +FK++ D + +++ + G ++ + + +++V Sbjct 190 QAVILVPVQTLVAQIVD---EFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVA 246 Query 346 TPGRLDDLVSTG---KLNLSQVRFLVLDEAD---GLLSQGYSDFINRMHNQIPQVT---- 395 TP RL +++ ++LS++RFL++DEAD L+ + + D + + + +V Sbjct 247 TPARLVQHLTSKIPPPIDLSKLRFLIVDEADRMGKLMREEWLDLVEFLCGGMERVACLKD 306 Query 396 --SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 + Q IV SATL S DV++L + P SV D + P+ D Sbjct 307 IIRQRRAPQKIVLSATL-SKDVEELHLWNLFKPRLFSATAV-SVKDITSGI-----PQVD 359 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 + RL + + + R P+ A+ + I +K ++ +IF Sbjct 360 HVSGRLA--------LPSSISHRLVVTDPKFHPLAV--------YQQITRNKFNRTLIFV 403 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 ++ N + +++ D+ + L G R R + LE+F K + R LIC+D Sbjct 404 -NEVSSSNRLAHVLKELCK-DQFEVDYFTAQLFGKR----RYKMLEKFNKNENRVLICSD 457 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 V ARG D++ V VIN LP + + +VHR GR GRA + G IS+ E ++++ + Sbjct 458 VLARGTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQDGYVISVGDKESKRLFVKML-- 515 Query 634 RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 + + ++E I+ +M S+ E L T+S Sbjct 516 KVTNLWGDTVEEQMEEYIFEKDMDRYSKALESLKATVS 553 >sp|Q0UMB6|DBP10_PHANO ATP-dependent RNA helicase DBP10 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP10 PE=3 SV=1 Length=878 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 89/354 (25%), Positives = 149/354 (42%), Gaps = 39/354 (11%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +I+ PSRELA QTL +K+F + D LR +L++GG + +Q + + DI++ TP Sbjct 150 RGVIMSPSRELALQTLKVVKEFGRGTD---LRTILLVGGDSLEEQFNSMTTNPDIIIATP 206 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GR L L+LS V+++V DEAD L G++ + + +P Q ++ S Sbjct 207 GRFLHLKVEMGLDLSSVQYIVFDEADRLFEMGFAAQLAEILYALPTSR------QTLLFS 260 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 ATL V + + + P + L E + + + + +R G Sbjct 261 ATLPKSLV-EFARAGLQEPKLIRLDAESKISPDLKSAYFTI-----KSGDRDGAL----- 309 Query 468 DVHAKDNT-RPGANSPEMW----SEAIKILKGEYAVRAIKEHK----MDQAIIFCRTKID 518 +H +N + E+W EA + KG+ R K + IIF TK Sbjct 310 -IHLLENVIKMPVGQTEVWKQAKEEADNLSKGKKRKRGSGNPKDAPVEESTIIFAATKHR 368 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 + L G + ++G+ R++ ++ F+ G R L+ TDVAARG Sbjct 369 VEYLSTLLKAAG---------YPVSYVYGNLDQTARQEQVKDFRAGLTRILVVTDVAARG 419 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 + LP +N G G GL I V T + + + + + Sbjct 420 YRHATHKPRHQLRLPFSTKNLCSSSGEDGPRWAEGLGIQPVQTCRSAISHRLTN 473 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 27/59 (46%), Positives = 40/59 (68%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ + +A+ + + +PT IQ +++PLIL G DV+ A TGSGKT AF IP+I+ Sbjct 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIE 138 >sp|A5E726|DBP6_LODEL ATP-dependent RNA helicase DBP6 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP6 PE=3 SV=1 Length=663 Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 84/335 (25%), Positives = 155/335 (46%), Gaps = 49/335 (15%) Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD----FINRMH-NQIPQVT 395 D+V+ TPGRL + ++ ++LS +R+LV+DEAD LL+Q + + I+++H Q+ V Sbjct 355 DVVISTPGRLVEHLAMDSISLSSLRYLVVDEADRLLNQSFQNWSQILISKIHLQQVYDVA 414 Query 396 SD-GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 + ++Q + SATL + D KL+ H P + + + + + V P + Sbjct 415 NVWSLKVQKFIFSATLTT-DAGKLASLDFHNPRLLIVNDSQRLVNELFSV--PAMLSEYK 471 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L + KS ++ P + ++ + I + K+ ++F + Sbjct 472 LNFGVAKSSLK----------------PLILAKFL-----------IAQEKLSDVLVFTK 504 Query 515 TK---IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 + I L Q + +K F + + + R + L+ F + L+ Sbjct 505 SNESSIRLCTLLQAIFDRICLQEKVKVGFMNLT---NNRTSLRSKILKDFTSQKINILVA 561 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 TD+ ARG+D+ + V+N L + + YVHR+GR RA + G A +LV + E+ W+ Sbjct 562 TDLIARGLDVTSIKDVVNYDLLNSSREYVHRVGRTARANQAGNAYNLVFGKGEEKWFKTI 621 Query 632 SSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL 666 SS + N +K+ + N QL+S+ +E L Sbjct 622 SS--EVSRNNDVKD-----VEVNLKQLISDEDEKL 649 Score = 39.7 bits (91), Expect = 0.10, Method: Compositional matrix adjust. Identities = 20/32 (63%), Positives = 25/32 (78%), Gaps = 4/32 (13%) Query 40 GDVLMAAETGSGKTGAFSIPVIQIVYETLKDQ 71 GDVL+ A TGSGKT A+SIP+I E+LKD+ Sbjct 271 GDVLVNASTGSGKTLAYSIPII----ESLKDR 298 >sp|Q7FGZ2|RH1_ARATH DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana OX=3702 GN=RH1 PE=2 SV=3 Length=522 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 97/394 (25%), Positives = 154/394 (39%), Gaps = 117/394 (30%) Query 288 KALIVEPSRELAEQTLNNIK---------------------QFKKYIDNPKLRELLIIGG 326 +AL+V P+R+LA Q + + + I PKL G Sbjct 106 RALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDA----GI 161 Query 327 VAARDQLSV-LENGVDIVVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFI 384 D LS LE+ VDI+V TPGRL D ++ K L +R+LV+DE D LL + Y ++ Sbjct 162 CYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWL 221 Query 385 NRMHNQIPQVTSDG---------------------------------KRLQVIVCSATLH 411 + Q+ Q + D RL +V SATL Sbjct 222 PTVL-QLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLT 280 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 D KL + +H P ++ G RL E+L Sbjct 281 Q-DPSKLIQLDLHHPLFMTTGGSRY-----------------RLPEKL------------ 310 Query 472 KDNTRPGANSPEMWSEAIKI-----LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 E +++ +K Y V +K + ++ IIF + ++ Sbjct 311 ---------------ECLRLICETGMKPVYLVALLKSWEGEKCIIFT-SSVETTRRLCKL 354 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G P K ++S G R + L+ F+KGD++ L+ +D RG+D+ GV Sbjct 355 LNFFGDPKIKAKEYS-----GGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTN 409 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 VIN +P + ++HR GR RA + G +L++ Sbjct 410 VINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLS 443 >sp|A3LNR6|HAS1_PICST ATP-dependent RNA helicase HAS1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=HAS1 PE=3 SV=2 Length=567 Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 80/330 (24%), Positives = 149/330 (45%), Gaps = 57/330 (17%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 KF P N ++V P+RELA Q ++ + ++IGG R + L G Sbjct 169 KFKPRNGTGVIVVSPTRELALQIFGVARELMAHHTQ---TFGIVIGGANRRQEAEKLAKG 225 Query 340 VDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 V++++ TPGRL D L +T ++ LV+DEAD +L G+ + + ++ +P+ + Sbjct 226 VNLLIATPGRLLDHLQNTQGFVFKNLKALVIDEADRILEIGFEEEMKQIIKILPK---EE 282 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++ + + T D+ ++S + P ++++ VP+T + Sbjct 283 RQSMLFSATQTTKVEDLARIS--LRPGPLYINV-----VPETAASTA-----------DG 324 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 L + ++ D S+ +L + +K++ + I+F + Sbjct 325 LEQGYVVCD------------------SDKRFLLLFSF----LKKYSKKKIIVFLSS--- 359 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 C+++ +YF + D + LHG +K +R F L+CTDVAARG Sbjct 360 CNSV-KYFGELLNYID-----LPVLDLHGKQKQQKRTNTFFEFCNAKQGTLVCTDVAARG 413 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +DI V ++I PD+ ++Y+HR+GR R Sbjct 414 LDIPAVDWIIQFDPPDDPRDYIHRVGRTAR 443 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + G+ +A+ +M + T +QA++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 105 FEDAGLSEPTMRAISDMGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEL 164 Query 64 VY 65 +Y Sbjct 165 LY 166 >sp|Q4R4T6|DDX28_MACFA Probable ATP-dependent RNA helicase DDX28 OS=Macaca fascicularis OX=9541 GN=DDX28 PE=2 SV=1 Length=546 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 94/351 (27%), Positives = 156/351 (44%), Gaps = 67/351 (19%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII--------GGVAARDQLSVLE 337 AP+ L++ PSRELA+Q + + P R L ++ G R QL+ + Sbjct 203 APRGLVLVPSRELAQQV--------QAVAQPLGRSLGLLVRDLEGGHGMCRIRMQLA-RQ 253 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM--HNQIPQVT 395 D++V TPG L + + ++L Q+ FLVLDEAD LL + + + ++ + + I Sbjct 254 PSADVLVATPGALWKALKSRLISLEQLSFLVLDEADTLLDESFLELVDCILEKSHIADGP 313 Query 396 SD-----GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 +D + Q+++ AT V +L +K+ P V ++ + H ++P Sbjct 314 ADLEDRFNPKAQLVLVGATFPE-GVGQLLDKVAS-PDAVT-----TITSSNLHCIMP--- 363 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 H++ + K GA+ +E + ILK + RA + + Sbjct 364 ------------HVKQTFLRLK-----GADK---VAELVHILK--HHNRAERTGPSGTVL 401 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 +FC + + L Y + H+ + L G R + F+K L+ Sbjct 402 VFCNSSSTVNWLG-YILDD--------HKIQHLRLQGQMPALMRAGIFQSFQKSSRDILL 452 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR--AERMGLAISLV 619 CTD+A+RG+D GV V+N P Q+Y+HR GRVGR +E G IS V Sbjct 453 CTDIASRGLDSTGVELVVNYDFPPTLQDYIHRAGRVGRVGSEVPGTVISFV 503 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 43/61 (70%), Gaps = 2/61 (3%) Query 4 FSEMGVMPEIAQAVEEM--DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ P + A++E+ + + PT +Q+ +IP +L G VL AAETGSGKT ++ +P+ Sbjct 128 FADLGLEPRVLHALQEVAPEVVQPTTVQSNTIPQLLRGRHVLCAAETGSGKTLSYLLPLF 187 Query 62 Q 62 Q Sbjct 188 Q 188 >sp|Q9NY93|DDX56_HUMAN Probable ATP-dependent RNA helicase DDX56 OS=Homo sapiens OX=9606 GN=DDX56 PE=1 SV=1 Length=547 Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 149/355 (42%), Gaps = 66/355 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS---VLENGVD 341 A + L++ P++ELA Q + I+Q Y R++ + AA D +S VL D Sbjct 81 QAVRGLVLVPTKELARQAQSMIQQLATYCA----RDVRVANVSAAEDSVSQRAVLMEKPD 136 Query 342 IVVGTPGRLDDLVSTGKLNLS-QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 +VVGTP R+ + L L + LV+DEAD L S G+ + + + +P++ Sbjct 137 VVVGTPSRILSHLQQDSLKLRDSLELLVVDEADLLFSFGFEEELKSLLCHLPRI------ 190 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK-GEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q + SAT + DV+ L E I+H P + L+ + PD + V + D+ Sbjct 191 YQAFLMSATFNE-DVQALKELILHNPVTLKLQESQLPGPDQLQQFQVVCETEEDKFLLLY 249 Query 460 ---------GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH---KMD 507 GKS + + + R E +S +L GE +R+ + H + + Sbjct 250 ALLKLSLIRGKSLLFVNTLERSYRLRLFL---EQFSIPTCVLNGELPLRS-RCHIISQFN 305 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 Q C D + L G P K G R+ R KGD Sbjct 306 QGFYDCVIATDAEVL--------GAPVK-----------GKRR--------GRGPKGDK- 337 Query 568 FLICTDV---AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +D ARGID H V V+N LP + Y+HR GR RA G+ ++ V Sbjct 338 ---ASDPEAGVARGIDFHHVSAVLNFDLPPTPEAYIHRAGRTARANNPGIVLTFV 389 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ P + QAV ++ W PT IQ ++IPL L G D+L A TGSGKT A++IP++Q+ Sbjct 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQL 68 Query 64 V 64 + Sbjct 69 L 69 >sp|Q6CGD1|DBP4_YARLI ATP-dependent RNA helicase DBP4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP4 PE=3 SV=1 Length=740 Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 90/344 (26%), Positives = 144/344 (42%), Gaps = 71/344 (21%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG---VAARDQLSVLENGVDIVVG 345 AL++ P+RELA Q +++ + L+IGG D+L+ L +I++ Sbjct 114 ALVISPTRELAVQIFQVLRKIGRC---HSFSAGLVIGGKDVAMEADRLAKL----NILIC 166 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL + T +LS V+ LVLDEAD +L G+ ++ + +P Q + Sbjct 167 TPGRLLQHMDQTSGFDLSNVKMLVLDEADRILDMGFKKTMDAILENLPV------DRQTL 220 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGE--DSVPDTV--HHVVVPVNPKTDRLWERLG 460 + SAT + V L+ + P ++ + S P + ++V V + K D LW Sbjct 221 LFSAT-QTKSVSDLARLSLADPKYISANPDTTSSTPKNLEQNYVCVELQDKLDTLW---- 275 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 +RT H K KI+ + F +K Sbjct 276 -GFLRT---HTK----------------FKII-----------------VFFSSSKQVRY 298 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 E + Q G P + LHG +K R + +F K L TD+ ARGID Sbjct 299 VYETFRTLQPGIP--------LLHLHGKQKQGARMDVVSKFSKASSSCLFATDIVARGID 350 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V +V+ V P++ Y+HR+GR R + G A+ + +E Sbjct 351 FPAVHWVVQVDCPEDAATYIHRVGRSARFGKSGKALLFLTPTEE 394 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 40/65 (62%), Gaps = 0/65 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ F E+ + + ++ ++ TD+Q +IP L G D+L AA TGSGKT AF +PV Sbjct 38 VSKFEELPLSEATIEGLKNSHYVTCTDVQKRAIPPALQGHDLLGAARTGSGKTLAFLVPV 97 Query 61 IQIVY 65 ++ ++ Sbjct 98 LECLF 102 >sp|A3GHW9|ROK1_PICST ATP-dependent RNA helicase ROK1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=ROK1 PE=3 SV=1 Length=558 Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 8/118 (7%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +H +R P +R++ ++RFK GD+ LI TDV ARG+D GV VIN +P Q YVHRI Sbjct 397 VIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNMVINYDVPQTAQAYVHRI 456 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCS-SRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 GR GR + G A++ E ++ + + + GC + G + W M +S Sbjct 457 GRTGRGGKAGRAVTFFTKEDDQAVKPIINVMKQSGC-------EAGFSGWMENMTKMS 507 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 44/158 (28%), Positives = 84/158 (53%), Gaps = 10/158 (6%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPG 348 L++ P+ ELA Q ++ + KL ++ +A + +++ + DI+V TP Sbjct 198 LVISPTNELAIQIFQELQILTR---GKKLNVAILSKQLANKLNNDIVKASKYDIIVSTPL 254 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 RL D+V K++LS+V LV+DEAD L QG F+ + + + T +++ + SA Sbjct 255 RLIDIVKNEKVDLSKVEQLVIDEADKLFDQG---FVEQTDDILSHCTY--TKIRKSMFSA 309 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 T+ S V++++ IM P V + +++ +T+ +V Sbjct 310 TIPS-GVEEMAHSIMRDPIRVIIGRKEAASNTIDQKLV 346 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/44 (55%), Positives = 32/44 (73%), Gaps = 0/44 (0%) Query 19 EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 E +++ PT IQ ES+P+ L G D++ A TGSGKT AF IP+IQ Sbjct 137 EAEFVEPTAIQCESLPISLSGRDLIACAPTGSGKTLAFLIPLIQ 180 >sp|Q6IMY8|HNRPU_RAT Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1 Length=798 Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 26/173 (15%) Query 102 FAIGSDGLCCQSREVKE----WHGCRATKGLMKGK--------------HYY--EVSCHD 141 F I D L S ++ W G RA+ G+ KGK H Y ++ H+ Sbjct 273 FKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHE 332 Query 142 QGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCY--LDID 199 R+GWS + + LG ++F +G+ G K+ N + ++YGE+F +D I C+ + D Sbjct 333 ---VRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFETD 389 Query 200 KGHVKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEEFKFPP 251 + + ++KNG+DLG+AF+I + ++ LFP + N ++FNFG++E + P Sbjct 390 EVELSYAKNGQDLGVAFKISKEVLADRPLFPHVLCHNCAVEFNFGQKEKPYFP 442 >sp|Q5XPI3|RN123_MOUSE E3 ubiquitin-protein ligase RNF123 OS=Mus musculus OX=10090 GN=Rnf123 PE=1 SV=1 Length=1314 Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 66/226 (29%), Positives = 98/226 (43%), Gaps = 10/226 (4%) Query 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178 R+T + KGK YEV QGL ++GW T+ + +G + + G + N Sbjct 125 RSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRKWNVT 184 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE- 237 NYG+ + D + C +D+D G + F NG LG AFE A FPA L E Sbjct 185 TTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLSFKES 244 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH-SGNAQVTQTKFLPNAPKALIVEPSR 296 + FNFG ++P GF L P +V++Q G Q + L L+ S Sbjct 245 VAFNFGSRPLRYPVA-GFRPLQDPPFADLVRAQRLLGCFQAVLSVELDPVEGRLVETESS 303 Query 297 ELAEQTLNNIKQFKKYIDN---PKLRELLIIGGVAARDQLSVLENG 339 E Q + +I + P LR++ ++ V L V+E G Sbjct 304 EWQLQGQPTVLLTLAHIFHHFAPLLRKVYLVEAVLMSFLLGVVEKG 349 >sp|Q5XPI4|RN123_HUMAN E3 ubiquitin-protein ligase RNF123 OS=Homo sapiens OX=9606 GN=RNF123 PE=1 SV=1 Length=1314 Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 49/154 (32%), Positives = 72/154 (47%), Gaps = 6/154 (4%) Query 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178 R+T + KGK YEV QGL ++GW T+ + +G + + G + N Sbjct 125 RSTTCVYKGKWLYEVLISSQGLMQIGWCTISCRFNQEEGVGDTHNSYAYDGNRVRKWNVT 184 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE- 237 NYG+ + D + C +D+D G + F NG LG AFE A FPA L E Sbjct 185 TTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLSFKES 244 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 + FNFG ++P G+ L P +V++Q Sbjct 245 VAFNFGSRPLRYPVA-GYRPLQDPPSADLVRAQR 277 >sp|Q9D0R4|DDX56_MOUSE Probable ATP-dependent RNA helicase DDX56 OS=Mus musculus OX=10090 GN=Ddx56 PE=1 SV=1 Length=546 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 95/352 (27%), Positives = 147/352 (42%), Gaps = 60/352 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD---QLSVLENGVD 341 A + L++ P++ELA Q I+Q Y R++ + AA D Q +VL D Sbjct 81 QAVRGLVLVPTKELARQAQAMIQQLAAYCA----RDVRVANVSAAEDSASQRAVLMEKPD 136 Query 342 IVVGTPGRLDDLVSTGKLNLS-QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 +VVGTP R+ + L L + LV+DEAD L S G+ D + + +P++ Sbjct 137 VVVGTPSRVLSHLQQNTLKLRDSLELLVVDEADLLFSFGFEDELKSLLCHLPRI------ 190 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK-GEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q + SAT + DV+ L E ++H P + L+ + PD + V + D+ Sbjct 191 YQAFLMSATFNE-DVQTLKELVLHNPVTLKLQESQLPGPDQLQQFQVVCETEEDKFLLLY 249 Query 460 ---------GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH---KMD 507 GK+ + + + R E +S +L GE +R+ + H + + Sbjct 250 ALLKLSLIRGKALLFVNTLERGYRLRLFL---EQFSIPSCVLNGELPLRS-RCHIISQFN 305 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 Q + C D + L GP K G R+ K N + V Sbjct 306 QGLYDCVIATDAEIL---------GPQVK----------GKRRGRGSKGNKASDPESGV- 345 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 ARGID H V V+N LP + YVHR GR RA G+ ++ V Sbjct 346 --------ARGIDFHHVSAVLNFDLPPTAEAYVHRAGRTARANNPGIVLTFV 389 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 30/59 (51%), Positives = 41/59 (69%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ P + QAV ++ W PT IQ ++IPL L G D+L A TGSGKT A++IP++Q Sbjct 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQ 67 >sp|Q8VEK3|HNRPU_MOUSE Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 Length=800 Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 26/173 (15%) Query 102 FAIGSDGLCCQSREVKE----WHGCRATKGLMKGK--------------HYY--EVSCHD 141 F I D L S ++ W G RA+ G+ KGK H Y ++ H+ Sbjct 275 FKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHE 334 Query 142 QGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCY--LDID 199 R+GWS + + LG ++F +G+ G K+ N + ++YGE+F +D I C+ + D Sbjct 335 ---VRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFETD 391 Query 200 KGHVKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEEFKFPP 251 + + ++KNG+DLG+AF+I + ++ LFP + N ++FNFG++E + P Sbjct 392 EVELSYAKNGQDLGVAFKISKEVLADRPLFPHVLCHNCAVEFNFGQKEKPYFP 444 >sp|Q0DLB9|RH17_ORYSJ DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp. japonica OX=39947 GN=RH17 PE=2 SV=2 Length=591 Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 90/354 (25%), Positives = 147/354 (42%), Gaps = 39/354 (11%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+REL Q +Q L I+GG + + L G+ I++ TPG Sbjct 101 ALVLVPTRELCLQVYGIAQQLVHRFH--WLVPGYIMGGENRAKEKARLRKGISILIATPG 158 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI----------NRMHNQIPQVTSD 397 RL D L T +R++V DEAD +L G+ + N NQ Sbjct 159 RLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEP 218 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 KR Q ++ SATL+ V +L++ + P + L ++S +H + + + E Sbjct 219 MKR-QNLLLSATLNE-KVNRLAKISLKNPVMIGLDEQNSSAHGKNHTSLLSDDE-----E 271 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY------AVRAIKEHKMDQAII 511 + + H T + D P ++ +K+ G ++++ E ++ ++ Sbjct 272 EILEKHNVTVEQAVDDFKLPA----QLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVV 327 Query 512 FCRTKIDCDNLEQYFIQQ-------GGGPDKKGHQFSCVC--LHGDRKPHERKQNLERFK 562 + D + + Q DKK SC LHG+ +RK++ F Sbjct 328 VFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFS 387 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 L+ TDVAARG+D V +I P E YVHR+GR R G A+ Sbjct 388 SEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEAL 441 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 22/63 (35%), Positives = 43/63 (68%), Gaps = 1/63 (2%) Query 3 AFSEMGVMPEI-AQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F+++G+ P + A ++M + PT IQA++IP+ + G +L+ A TG+GKT A+ P++ Sbjct 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83 Query 62 QIV 64 ++ Sbjct 84 HLL 86 >sp|A7ESL8|DBP4_SCLS1 ATP-dependent RNA helicase dbp4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp4 PE=3 SV=1 Length=808 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 88/342 (26%), Positives = 148/342 (43%), Gaps = 65/342 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA Q +++ +Y LIIGG + +++ L ++I+V TPG Sbjct 124 ALIISPTRELAIQIFEVLRKIGRY---HTFSAGLIIGGRSLQEERERL-GRMNILVCTPG 179 Query 349 R-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 R L + T ++ ++ LVLDEAD ++ G+ ++ + +P K+ Q ++ S Sbjct 180 RMLQHMDQTAAFDVDNLQMLVLDEADRIMDMGFQTSVDAILEHLP------KQRQTMLFS 233 Query 408 ATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV--HHVVVPVNPKTDRLWERLGKSH 463 AT + V L+ + P +V + + P T+ H+ VVP L E+L Sbjct 234 AT-QTKKVSDLARLSLKEPEYVAVHEAASSATPTTLQQHYCVVP-------LPEKL---- 281 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 NT G + ++ I + VR + E +L Sbjct 282 ----------NTLFGFIRANLKAKIIVFMSSGKQVRFVYE-----------------SLR 314 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 Q G P + LHG +K R +F + TDV ARG+D Sbjct 315 HL---QPGIP--------LLHLHGRQKQTARLDITSKFSSSKNSCIFATDVVARGLDFPA 363 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +VI + P++ Y+HR+GR R ++G A+ + +E+ Sbjct 364 VDWVIQLDCPEDADTYIHRVGRTARYGKVGRAVLFLDPSEEE 405 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/62 (42%), Positives = 42/62 (68%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+ + + +E + TD+Q++++PL L G D+L AA+TGSGKT AF +PV++ Sbjct 51 FSELPLSGPTSSGLEASHFKTLTDVQSKAVPLALKGKDILGAAKTGSGKTLAFLVPVLEN 110 Query 64 VY 65 +Y Sbjct 111 LY 112 >sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=ROK1 PE=3 SV=2 Length=537 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 8/128 (6%) Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + + +H +R P +R++ + RFK GD LI TDV ARG+D GV VIN +P Q Sbjct 376 KLNVEVIHAERTPKQREEAIRRFKNGDAWVLITTDVLARGVDFKGVNLVINYDVPQTSQA 435 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-SRGKGCYNTRLKEDGGCTIWYNEMQ 657 YVHRIGR GR + G A++ E + V + + GC+ G + W M+ Sbjct 436 YVHRIGRTGRGGKEGKAVTFFTKEDKLAIKPVLNVMKQSGCHE-------GYSEWMESME 488 Query 658 LLSEIEEH 665 L++ E+ Sbjct 489 KLTKKEKQ 496 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/81 (36%), Positives = 42/81 (52%), Gaps = 1/81 (1%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTG 84 PT IQ E+IP G D++ A TGSGKT A+ IP+ Q + + K + G +G T Sbjct 129 PTAIQCEAIPASAEGRDLIACAPTGSGKTLAYLIPMAQALISSPKTKNYGIRGVVIAPTN 188 Query 85 ASVLNKWQ-MNPYDRGSAFAI 104 + +Q + P RGS + Sbjct 189 ELAIQIYQTLAPMCRGSNLNV 209 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/86 (35%), Positives = 48/86 (56%), Gaps = 6/86 (7%) Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 N D+++ TP RL DLV +++LS+V LV+DEAD L G F+ + + T Sbjct 228 NKFDVLICTPLRLIDLVKKEQVDLSKVEHLVIDEADKLFDHG---FVEQTDEILSHCTLP 284 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIM 423 +R + SAT+ S V++++ IM Sbjct 285 TRRTSMF--SATIPS-GVEEMANSIM 307 >sp|A5DAR2|DBP7_PICGU ATP-dependent RNA helicase DBP7 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP7 PE=3 SV=3 Length=747 Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 91/360 (25%), Positives = 159/360 (44%), Gaps = 46/360 (13%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+RELA Q ++ + + ++ ++IGG + + + + GV+I+V TPG Sbjct 215 AIVLVPTRELANQIYGVLETLTRC--HHQIVPGIVIGGEKKKSEKARIRKGVNILVATPG 272 Query 349 RLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH------NQIPQVTSD---- 397 RL D + +T L+LSQ+R+L+LDE D L+ G+ + I ++ ++I + T Sbjct 273 RLADHIENTTSLDLSQLRYLILDEGDRLIDLGFEETITKITDTITRCSRISESTQKWQGL 332 Query 398 -GKRLQVIVCSATLHSFDVKKLSEKIMHFPTW-------------VDLKGEDSVPDTVHH 443 KR+ V+ CSAT+ + +V+KL I++ P +D K T Sbjct 333 PTKRVNVL-CSATMEN-NVEKLGSIILNNPEQISIDTSKSREGDEIDSKSMAPAQLTQRV 390 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR-----PGANSPEMWSEAIKILKGEYAV 498 VVVP + L L K +T + + R ++S EA K E+ Sbjct 391 VVVPAKLRLVTLSAVL-KEVAKTAPTSSTEIVRTIVFFSCSDSVNFHYEAFKRNGSEFRK 449 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 E + + + + + + + P + LHG R L Sbjct 450 ARNAETNRFEMVTVGEDEANAEGSDTEIPKISSAPTISANSV-VYKLHGSLTQQVRTSTL 508 Query 559 ERFKKG----------DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + F + + L+CTDVA+RG+D+ + V+ P Q+++HRIGR R Sbjct 509 QSFVQAVPFDNSENNYNHLILLCTDVASRGLDLPNISSVVEYDPPFSVQDHLHRIGRTAR 568 Score = 37.7 bits (86), Expect = 0.42, Method: Compositional matrix adjust. Identities = 19/55 (35%), Positives = 32/55 (58%), Gaps = 1/55 (2%) Query 17 VEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPVIQIVYETLKD 70 E + + PT IQ IP +L D+ + A+TGSGKT +F +P++ + + K+ Sbjct 151 TESLRFKNPTQIQKSVIPSLLSTSRDLFVKAQTGSGKTLSFLLPILHKLMQEKKN 205 >sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens OX=9606 GN=HNRNPU PE=1 SV=6 Length=825 Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 91/173 (53%), Gaps = 26/173 (15%) Query 102 FAIGSDGLCCQSREVKE----WHGCRATKGLMKGK--------------HYY--EVSCHD 141 F I D L S ++ W G RA+ G+ KGK H Y ++ H+ Sbjct 299 FKISRDRLSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHE 358 Query 142 QGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKG 201 R+GWS + + LG ++F +G+ G K+ N + ++YGE+F +D I C+ + + Sbjct 359 ---VRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESD 415 Query 202 HVK--FSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEEFKFPP 251 V+ ++KNG+DLG+AF+I + + LFP + N ++FNFG++E + P Sbjct 416 EVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKPYFP 468 >sp|Q6C193|SPB4_YARLI ATP-dependent rRNA helicase SPB4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SPB4 PE=3 SV=1 Length=626 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 96/376 (26%), Positives = 153/376 (41%), Gaps = 80/376 (21%) Query 289 ALIVEPSRELAEQT----------------------LNNIKQFKKYIDNPK-LRELLIIG 325 +++V P+RELA QT L K+ K PK +R LI+G Sbjct 81 SVVVSPTRELARQTYEVLQSILEMGCPEADASDKITLEKKKKGKAAPTMPKKIRGQLIMG 140 Query 326 G--VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 G + D + L + I+V TPGRL +L+ ++ S LVLDEAD LL G+ Sbjct 141 GDLPSHMDLKNFLRDKPQIIVATPGRLLELLRAPQIKTSAFDSLVLDEADRLLDLGFGRD 200 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK----GEDSVPD 439 I + N +P+ G + SAT+ ++ L + + P + +K E P Sbjct 201 ITSIINILPKQRRTG------LFSATITDA-IQNLVKIGLRNPVKIVVKVGGKKEQKTPL 253 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 ++ V + P+ E+L YA+ Sbjct 254 SLGLSYVVLEPR-----EKLA-----------------------------------YALN 273 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + + +AI++ T +Q F G + + LHG R + L Sbjct 274 LLSIYPYRKAIVYLPTCAAVTYYQQMFSHLNEG---REEPYEIYGLHGKLPSSTRIKILN 330 Query 560 RFKK-GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 +++K G L+ TD+AARG+DI V V+ + P + + HR GR GRA R G AI L Sbjct 331 KYQKTGAQAILMTTDIAARGLDIPEVDLVVQLDPPSDADTFQHRCGRAGRAGRQGQAIVL 390 Query 619 VATEKEKVWYHVCSSR 634 + +E+ + + R Sbjct 391 LHKGREEEYVDLMRVR 406 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 40/67 (60%), Gaps = 0/67 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + ++ V P + +E+ + T +QA IP+ G DV++ A TGSGKT AF +P+IQ Sbjct 5 WKDLPVAPWLIDTMEQFGFTDMTPVQASVIPMFAGNKDVIVEAVTGSGKTIAFLVPLIQR 64 Query 64 VYETLKD 70 + LK+ Sbjct 65 MLNLLKE 71 >sp|A0KEG9|RHLB_AERHH ATP-dependent RNA helicase RhlB OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=rhlB PE=3 SV=1 Length=429 Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/112 (42%), Positives = 66/112 (59%), Gaps = 9/112 (8%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 ++AI+F TK C+++ + + GH+ L GD +R + LE F KG V Sbjct 257 EKAIVFANTKHVCEDVHAWL-------ENDGHRVGL--LTGDVPQKKRMKILEDFTKGTV 307 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G +ISL Sbjct 308 DILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISL 359 Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 88/152 (58%), Gaps = 8/152 (5%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L N P+A+I+ P+RELA Q N+ + + L+ L GG QL+VLE GVDI Sbjct 81 LINQPRAIIMAPTRELAVQIYNDAESMSA---STGLKLGLAYGGEGYDKQLAVLEQGVDI 137 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++GT GR+ D + ++LS ++ +VLDEAD + G+ I + ++P T +RL Sbjct 138 LIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIRFLFRRMPPAT---ERLS 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 ++ SATL S V++L+ + M+ P V ++ E Sbjct 195 MLF-SATL-SLRVQELAYEHMNHPEHVQIEPE 224 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F++MG+ PE+ +E + T IQA S+PL++ G D+ A+TG+GKT AF Sbjct 11 FAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKTLAF 63 >sp|Q54EC2|DDX55_DICDI Probable ATP-dependent RNA helicase ddx55 OS=Dictyostelium discoideum OX=44689 GN=ddx55 PE=3 SV=1 Length=663 Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 89/320 (28%), Positives = 145/320 (45%), Gaps = 70/320 (22%) Query 321 LLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRF-----LVLDEADG 374 LL+IGG L +N G +I++GTPGR D+ ++ N Q +F L+LDEAD Sbjct 159 LLLIGGTDIYQDLVNYKNYGGNILIGTPGRTDEFLTRVVRNDQQFKFKEFEMLILDEADR 218 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK-- 432 LL G+ IN + ++P+ G + SAT S +VK+L+ M P V + Sbjct 219 LLDMGFHLPINSILLKLPKQRRTG------LFSATQTS-EVKELARTGMRNPFKVSVSVK 271 Query 433 -----GEDSVPDTV--HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + S+P T+ +++VPV + ++L VH Sbjct 272 HIETHEDQSIPTTLDNRYMIVPVEERLNQL-------------VH--------------- 303 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + + I ++K+ II+ T C ++ +F G F L Sbjct 304 ----------FLLNHIDKNKI---IIYFLT---CSTVDYFFKILQSVKVLSGKPF--FSL 345 Query 546 HGDRKPH-ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 HG + PH +R + + F + L+ TD+AARG+DI V +V+ P + + +VHRIG Sbjct 346 HG-KAPHSQRIKVFDSFSQATNGCLLSTDLAARGLDIPNVDWVLQYDSPQDPKAFVHRIG 404 Query 605 RVGRAERMGLAISLVATEKE 624 R R R G A+ ++ E++ Sbjct 405 RTARMGRDGNALIFLSPEED 424 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 0/35 (0%) Query 28 IQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +Q+ IPL + DVL+ A TGSGKT AF IP+I+ Sbjct 36 VQSAVIPLFMSNKDVLVEACTGSGKTLAFVIPIIE 70 >sp|D3ZXK7|RN123_RAT E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus OX=10116 GN=Rnf123 PE=1 SV=1 Length=1318 Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 72/153 (47%), Gaps = 6/153 (4%) Query 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178 R++ + KGK YEV QGL ++GW T+ + +G + + G + N Sbjct 123 RSSTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRKWNVT 182 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE- 237 NYG+ + D + C +D+D G + F NG LG AFE A FPA L E Sbjct 183 TTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLSFKES 242 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FNFG ++P GF L P +V++Q Sbjct 243 VAFNFGSRPLRYPVA-GFRPLQDPPFADLVRAQ 274 >sp|Q873H9|SPB4_NEUCR ATP-dependent rRNA helicase spb-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=spb-4 PE=3 SV=1 Length=654 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 98/374 (26%), Positives = 163/374 (44%), Gaps = 65/374 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKY-------------------IDNPKLRELLIIG 325 N + +I+ P+RELA Q N + K+ P + L++G Sbjct 89 NHVQGIIISPTRELATQIYNVLVSLVKFHEPSAEAISHAKSDEKRPTATQPVVVPQLLVG 148 Query 326 GV--AARDQLSVLENGVDIVVGTPGRLDDLVSTG--KLNLSQVRFLVLDEADGLLSQGYS 381 G AA D + L ++++GTPGRL +L+S+ K S L++DEAD LL G++ Sbjct 149 GTTKAAEDLGTFLRLSPNLLIGTPGRLAELLSSAYVKAPASTFEVLIMDEADRLLDMGFA 208 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + +NR+ +P+ G + SA+L S V++L + +P Sbjct 209 NELNRILGYLPKQRRTG------LFSASL-SDAVERLITVGLLYP--------------- 246 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 H + V V ++ + + T + + A + + + Sbjct 247 HKITVRVK-------------SLKDGGIIQERKTPMSLQMSYLVTPASQKMPAIVQLLEK 293 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 E + ++IIF + + +YF + G G FS LHG +P R++N ERF Sbjct 294 LEPRPQRSIIFFSSCMAV----KYFSRILGAVLPAG--FSVTSLHGKLEPKVREKNYERF 347 Query 562 -KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 L+ TD+AARG+DI V VI P + + ++HR GR GRA R GLA+ L+ Sbjct 348 VNTTSPMVLLTTDLAARGLDIPQVDLVIQHDPPTDTKVFIHRCGRAGRAGRRGLAVVLLQ 407 Query 621 TEKEKVWYHVCSSR 634 +E+ + + R Sbjct 408 PGREEGYVQLLEVR 421 Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust. Identities = 23/59 (39%), Positives = 33/59 (56%), Gaps = 4/59 (7%) Query 8 GVMPEIAQAV----EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + P +AQ + M + PT +Q + L G DV++ A TGSGKT AF IPV++ Sbjct 19 ALTPPLAQWILDYLSSMGFTQPTPVQKSCLELFRGNKDVVVEAVTGSGKTLAFLIPVVE 77 >sp|A4STJ7|RHLB_AERS4 ATP-dependent RNA helicase RhlB OS=Aeromonas salmonicida (strain A449) OX=382245 GN=rhlB PE=3 SV=1 Length=429 Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 66/112 (59%), Gaps = 9/112 (8%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 ++AI+F TK C+++ + + GH+ L GD +R + LE F KG + Sbjct 257 EKAIVFANTKHVCEDVHAWL-------ENDGHRVGL--LTGDVPQKKRMKILEDFTKGTL 307 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G +ISL Sbjct 308 DILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISL 359 Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 55/152 (36%), Positives = 87/152 (57%), Gaps = 8/152 (5%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L N P+A+I+ P+RELA Q N+ + L+ L GG QL+VLE GVDI Sbjct 81 LVNQPRAIIMAPTRELAVQIYNDADTISA---STGLKLGLAYGGEGYDKQLAVLEQGVDI 137 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++GT GR+ D + ++LS ++ +VLDEAD + G+ I + ++P T +RL Sbjct 138 LIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIRFLFRRMPAPT---ERLS 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 ++ SATL S V++L+ + M+ P V ++ E Sbjct 195 MLF-SATL-SLRVQELAYEHMNHPEHVQIEPE 224 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 0/53 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 F++MG+ PE+ +E + T IQA S+PL++ G D+ A+TG+GKT AF Sbjct 11 FAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKTIAF 63 >sp|A1CIQ5|HAS1_ASPCL ATP-dependent RNA helicase has1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=has1 PE=3 SV=1 Length=625 Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 91/337 (27%), Positives = 140/337 (42%), Gaps = 63/337 (19%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N L+V P+RELA Q ++ ++ ++IGG R + Sbjct 205 LSALRFKPRNGTGVLVVSPTRELALQIFGVARELCQHHSQTYG---IVIGGANRRAEAEK 261 Query 336 LENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV++++ TPGRL D L +T ++ LV+DEAD +L G F + M QI ++ Sbjct 262 LMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVG---FEDEMR-QIVKI 317 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 +R + M F K ED R Sbjct 318 LPSEER--------------------QTMLFSATQTTKVEDLA----------------R 341 Query 455 LWERLGKSHIRTDDVHAKD-NTRPGANSPEMWSEAIK--ILKGEYAVRAIKEHKMDQAII 511 + R G +I D H K+ +T G + EA K +L + R +K + II Sbjct 342 ISLRPGPLYINVD--HRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLK-----KKII 394 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 + +C + P + LHG +K +R F LIC Sbjct 395 VFFSSCNCVKYHAELLNYIDLP--------VLELHGKQKQQKRTNTFFEFCNAKQGTLIC 446 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 TDVAARG+DI V ++I PD+ ++Y+HR+GR R Sbjct 447 TDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTAR 483 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G+ + +A+ EM + T+IQ +IP +L G DVL AA+TGSGKT +F IP +++ Sbjct 145 FTELGLSEKTLKAINEMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEM 204 Query 64 V 64 + Sbjct 205 L 205 >sp|Q5AZY1|MRH4_EMENI ATP-dependent RNA helicase mrh4, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=mrh4 PE=3 SV=1 Length=630 Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 107/392 (27%), Positives = 165/392 (42%), Gaps = 79/392 (20%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+A+I+ P+ EL Q +K F + K R +I + R S L N G+DI+V Sbjct 272 PRAIILVPTAELVAQVGAKLKAFAHTV---KFRSGIISSNLTPRRIKSTLFNPAGIDILV 328 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ-V 403 TP L + T LS+V LVLDEAD L+ + + + ++ LQ + Sbjct 329 STPHLLASIAKTDPYVLSRVSHLVLDEADSLMDRSFLPISTEV------ISKAAPSLQKL 382 Query 404 IVCSATL-HSFD--VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK--------- 451 I CSAT+ S D ++KL I T ++P V VV + Sbjct 383 IFCSATIPRSLDSQLRKLYPDIWRLTT----PNLHAIPRRVQLGVVDIQKDPYRGNRNLA 438 Query 452 -TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE--AIKILKGEYAVRAIKEHKMDQ 508 D +W +GKS +D+ A SP WSE KIL V + + D+ Sbjct 439 CADVIWS-IGKSGAGSDE----------AGSP--WSEPKTKKIL-----VFVNEREEADE 480 Query 509 AIIFCRTK-IDCDNLEQ------------YFIQQGGGPD-------KKGHQFSCVCLHGD 548 F ++K ID + + F + P +K Q + + Sbjct 481 VAQFLKSKGIDAHSFNRDSGTRKQEEILAEFTEPAAVPTAEEILLARKQQQRENINIPFV 540 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 P ++ ER G V+ L+ TD+A+RGID + VI +P +++HR+GR+GR Sbjct 541 -LPERTNRDTERRLDG-VKVLVTTDIASRGIDTLALKTVILYHVPHTTIDFIHRLGRLGR 598 Query 609 AERMGLAISLVATEKEK--------VWYHVCS 632 + G A+ LV + K VW+ + S Sbjct 599 MGKRGRAVVLVGKKDRKDVVKEVREVWFGLDS 630 Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust. Identities = 27/72 (38%), Positives = 33/72 (46%), Gaps = 24/72 (33%) Query 10 MPEIAQAVEEMDWLLPTDIQAESIPLILGGGDV-----------------LMAAETGSGK 52 +P IA AV PT IQ +IP +L L+AAETGSGK Sbjct 162 LPGIADAV-------PTPIQRVAIPRLLEDAPAKKQAKKVDDDEPQYEQYLLAAETGSGK 214 Query 53 TGAFSIPVIQIV 64 T A+ IPVI + Sbjct 215 TLAYLIPVIDAI 226 >sp|Q0CF43|DBP7_ASPTN ATP-dependent RNA helicase dbp7 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp7 PE=3 SV=2 Length=769 Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 96/381 (25%), Positives = 157/381 (41%), Gaps = 91/381 (24%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+++ P+REL +Q L + + +I +IGG + + + L G++I+V Sbjct 238 AIVLAPTRELCKQISVVLEGLLRCAHWI-----VAGTVIGGEKKKSEKARLRKGLNILVA 292 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD----FINRMH-----NQIPQVT 395 TPGRL D L +T L++S VR+LVLDE D L+ G+ I ++ ++IP V Sbjct 293 TPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEQELQGIIKKLDARQRPSRIPGVP 352 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + + I+CSATL +V+KL GE S+ D +H P + Sbjct 353 T---KRTTILCSATL-KMNVQKL--------------GEMSLKDAIHIKADPAD------ 388 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI---------KEHKM 506 D K++ P ++ I+ + + + ++ + Sbjct 389 ---------EDGDAKPKNDDESAFTVPAQLKQSYAIVAAKLRLVTLTAFLKRTFMRKGSV 439 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDK-----------------------KGHQFSC- 542 +AI+F D + F ++ D+ + FS Sbjct 440 MKAIVFVSCADSVDFHFEVFTRKLQDSDENAEDSDASDTKEKPAAFTHNTIARATAFSNP 499 Query 543 ---VCLH---GDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 V LH G H R L F + D L+CTDVA+RG+D+ V VI Sbjct 500 SNPVTLHRLHGSLPQHVRTSTLASFARNKDASVLVCTDVASRGLDLPNVDLVIEYDPAFS 559 Query 596 KQNYVHRIGRVGRAERMGLAI 616 ++++HRIGR R R G A+ Sbjct 560 AEDHLHRIGRTARLGRDGRAL 580 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 45/89 (51%), Gaps = 2/89 (2%) Query 4 FSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 F+ +G+ P +A + +++ PT IQ SI +L D + AETGSGKT A+ +P++ Sbjct 144 FTNLGLSPTLAAHLLTKLELKAPTAIQKASISQLLKEESDAFIQAETGSGKTLAYLLPLV 203 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNK 90 Q + TT G V+++ Sbjct 204 QRIMALSHPTNRTDATSTTDAEGQPVVHR 232 >sp|O74764|SPB4_SCHPO ATP-dependent rRNA helicase spb4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spb4 PE=3 SV=1 Length=606 Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 83/322 (26%), Positives = 138/322 (43%), Gaps = 60/322 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNP-----KLRELLIIGG--VAARDQLSVLENGVD 341 ALIV P+RELA Q N K+ Y + KL + IGG D S E Sbjct 75 ALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTLTNDLASFREKNPS 134 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 +V+GTPGRL++++S ++ + L+LDEAD L+ G+ + + +Q+P+ G Sbjct 135 VVIGTPGRLNEMLS--HISSKHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTG--- 189 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT++ + + F L+ V TV Sbjct 190 ---LFSATMN--------DTVSSFLKIAGLRNSVRVSVTV-------------------- 218 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIK-ILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K +TR +S + S I I K + + + + ++AI+F + + Sbjct 219 -------TSKKIDTR-TPSSLAIQSLVIPPIYKVQCMIHLLCTIEYEKAIVFFSSCASVE 270 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGI 579 F+ F V LHG + R +N E+FKK + + L TD+A+RG+ Sbjct 271 YFNSLFLTYKLP-------FEIVALHGQQVQSNRSRNFEKFKKSNKKTVLFTTDIASRGL 323 Query 580 DIHGVPYVINVTLPDEKQNYVH 601 DI V +V+ + P + +++ H Sbjct 324 DIPNVDFVLQLDPPLDPKSFSH 345 Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 0/57 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 +F + + + AV + T +QA +IPL L D+++ A TGSGKT A+ +P Sbjct 2 SFQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLP 58 >sp|Q94C75|RH25_ARATH DEAD-box ATP-dependent RNA helicase 25 OS=Arabidopsis thaliana OX=3702 GN=RH25 PE=2 SV=2 Length=563 Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 94/344 (27%), Positives = 150/344 (44%), Gaps = 65/344 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA-ARDQLSVLENGVDIVVGTPG 348 L+V P+RELA Q KY +P + ++IGG +Q + ++ I+V TPG Sbjct 160 LVVCPTRELACQAAAEANILLKY--HPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPG 217 Query 349 RLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 RL D + S L V+ LVLDEAD LL G+ I R+ +P K+ Q + Sbjct 218 RLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIAAVP------KQRQTFL 271 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ S +V+++ V LK + + V E G++H + Sbjct 272 FSATV-SDEVRQICH--------VALKRDHEFVNCVQ--------------EGAGETHQK 308 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD----QAIIFCRTKIDCDN 521 ++ M + + Y + +K+H D + IIFC T + Sbjct 309 VSQMY-------------MIASLDRHFSLLYGL--LKKHITDNVGYKVIIFCTTAMVTRL 353 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE-RKQNLERFKKGDVRFLICTDVAARGID 580 + D G V RKP R + + F+K L+ +DV+ARG+D Sbjct 354 VA----------DLLGKLSLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVD 403 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 V V+ + LP +++ Y+HR+GR GR + G + L+A +E Sbjct 404 YPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEE 447 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/63 (37%), Positives = 38/63 (60%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + +E+ + T +Q ++PLIL G D+L A+TG+GKT AF +P I+ Sbjct 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141 Query 64 VYE 66 V + Sbjct 142 VIK 144 >sp|A0A5F9C6I2|RN123_RABIT E3 ubiquitin-protein ligase RNF123 OS=Oryctolagus cuniculus OX=9986 GN=RNF123 PE=1 SV=2 Length=1314 Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 71/153 (46%), Gaps = 6/153 (4%) Query 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178 R+T + KGK YEV QGL ++GW T+ + +G + + G + N Sbjct 125 RSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVRKWNVT 184 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE- 237 NYG+ + D + C +D+D G + F NG LG AFE A FPA L E Sbjct 185 TTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAISLSFKES 244 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FNFG ++P G+ L P + ++Q Sbjct 245 VAFNFGSRPLRYPVA-GYRPLQDPPCADLTRAQ 276 >sp|A1CB55|DBP7_ASPCL ATP-dependent RNA helicase dbp7 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp7 PE=3 SV=1 Length=755 Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 98/361 (27%), Positives = 158/361 (44%), Gaps = 52/361 (14%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+++ P+REL +Q L ++ + +I +IGG + + + L G++I+V Sbjct 224 AIVLAPTRELCKQISVVLESLLRCAHWIVAG-----TVIGGEKKKSEKARLRKGLNILVA 278 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN---------RMHNQIPQVT 395 TPGRL D L +T L++S VR+LVLDE D L+ G+ + I + ++IP + Sbjct 279 TPGRLADHLENTKVLDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGIP 338 Query 396 SDGKRLQVIVCSATLHSFDVKKLSE-------KIMHFPTWVDLKG------EDS---VPD 439 + + ++CSAT+ +V+KL E I P D K EDS VP Sbjct 339 T---KRTTVLCSATM-KMNVQKLGEISLKDAVHIKADPEDEDEKARLANKEEDSAYRVPA 394 Query 440 TV--HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + + VV + L L ++ +R V A+S + + Sbjct 395 QLKQSYAVVAAKLRLVTLTAYLKRTFMRKGSVMKTIVFVSCADSVDF----------HFE 444 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQY-FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 V K+ + D A K + L + I + + LHG + R Sbjct 445 VFTRKKQQTDDADASDEEKTEEKPLSPHGTIAPATAFSNPSNPVTLYRLHGSLPQNVRTS 504 Query 557 NLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 L F K + LICTDVA+RG+D+ V V+ ++++HRIGR R R G A Sbjct 505 TLASFAKNREPSVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGRTARVGRDGRA 564 Query 616 I 616 + Sbjct 565 L 565 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 39/63 (62%), Gaps = 2/63 (3%) Query 4 FSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVI 61 F+ +G+ P +A + +++ PT IQ SI +L GD + AETGSGKT A+ +P++ Sbjct 138 FTNLGLSPSLAAHLLTKLELKAPTAIQKASISQLLKEDGDAFIQAETGSGKTLAYLLPLV 197 Query 62 QIV 64 Q + Sbjct 198 QRI 200 >sp|Q5BBY1|HAS1_EMENI ATP-dependent RNA helicase has1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=has1 PE=3 SV=1 Length=609 Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 90/337 (27%), Positives = 139/337 (41%), Gaps = 63/337 (19%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N ++V P+RELA Q ++ + ++IGG R + Sbjct 190 LSALRFKPRNGTGVIVVSPTRELALQIFGVAREL---LTAHSQTYGIVIGGANRRAEAEK 246 Query 336 LENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV++++ TPGRL D L +T ++ LV+DEAD +L G F + M QI ++ Sbjct 247 LTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVG---FEDEMR-QIIKI 302 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 + R + M F K ED R Sbjct 303 LPNEDR--------------------QTMLFSATQTTKVEDLA----------------R 326 Query 455 LWERLGKSHIRTDDVHAKD-NTRPGANSPEMWSEAIK--ILKGEYAVRAIKEHKMDQAII 511 + R G +I D H K+ +T G + EA K +L + R +K + II Sbjct 327 ISLRPGPLYINVD--HRKEHSTVEGLEQGYVICEADKRFLLLFSFLKRNLK-----KKII 379 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 + +C + P + LHG +K +R F LIC Sbjct 380 VFFSSCNCVKYHAELLNYIDLP--------VLDLHGKQKQQKRTNTFFEFCNAKQGVLIC 431 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 TDVAARG+DI V ++I PD+ ++Y+HR+GR R Sbjct 432 TDVAARGLDIPAVDWIIQFDPPDDTRDYIHRVGRTAR 468 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/61 (48%), Positives = 43/61 (70%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G+ + Q ++EM + T+IQ +IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 130 FTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 189 Query 64 V 64 + Sbjct 190 L 190 >sp|Q5AAW3|DHH1_CANAL ATP-dependent RNA helicase DHH1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DHH1 PE=3 SV=1 Length=549 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 43/131 (33%), Positives = 65/131 (50%), Gaps = 9/131 (7%) Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 +++Q+IIFC + + L + + G +SC H R + F++G Sbjct 266 QINQSIIFCNSTNRVELLAKKITELG---------YSCYYSHAKMPQQARNKVFHEFRQG 316 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 VR L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L++ Sbjct 317 KVRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDR 376 Query 625 KVWYHVCSSRG 635 Y + G Sbjct 377 YSLYKIEQELG 387 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 48/150 (32%), Positives = 79/150 (53%), Gaps = 10/150 (7%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT ++ K++ + ++ GG + RD + L + V I+V Sbjct 97 NKVQALILVPTRELALQTSQVVRTLGKHVGT---QCMVTTGGTSLRDDIVRLHDPVHILV 153 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL + ++LS+ V+DEAD +LS+ + I ++ P Q + Sbjct 154 GTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFP------PNRQAL 207 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 + SAT VK +K + P ++L E Sbjct 208 LFSATF-PLAVKSFMDKHLTKPYEINLMDE 236 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT +F IP +Q Sbjct 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQ 90 Query 63 IVYETLKDQQ 72 +V L Q Sbjct 91 LVKPKLNKVQ 100 >sp|A7TNT1|DBP7_VANPO ATP-dependent RNA helicase DBP7 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP7 PE=3 SV=1 Length=732 Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 97/367 (26%), Positives = 153/367 (42%), Gaps = 63/367 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+ + P+RELA Q + + + L L+IGG + + + + L G + ++GTPG Sbjct 224 AIFITPTRELATQIYHVLSELTNCCH--YLVPCLLIGGESKKSEKARLRKGCNFIIGTPG 281 Query 349 R-LDDLVSTGKLN---LSQVRFLVLDEADGLLSQGY----SDFINRMHN------QIPQV 394 R LD +T + +R++VLDEAD L+ G+ +D + +H+ PQ+ Sbjct 282 RILDHFQNTQSVKEQLAVSLRYVVLDEADKLMELGFEETLTDILKLIHDISLNTSVYPQL 341 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSE------KIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 S R+ I+CSAT V KL K++ + +VPD + + V Sbjct 342 PS---RIMHILCSATSKG-SVTKLGNVALQNYKMISNSHVTNELENATVPDQLLQKIAIV 397 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 PK RL D +H K + + S + L +V E Sbjct 398 PPKL-----RLVTLAATLDSIHRK-HIEQKKKKLDYVSRTVVFLSCSDSVNFHFE----- 446 Query 509 AIIFCRTKIDCDNL---EQYFIQQGGG----------PDKKGHQFSCVCLHGDRKPHERK 555 F + + NL + +G PD F C LHG R Sbjct 447 --AFSSSDANHRNLVGESARLLTKGNDILPSFDPENDPD-----FICYKLHGSLSQQIRS 499 Query 556 QNLERFKK------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 L+ F K G L CTDVA+RG+D+ + VI + P ++++HRIGR RA Sbjct 500 STLQHFSKTNENVKGKHLVLFCTDVASRGLDLPEIGTVIELDPPFAVEDHLHRIGRTARA 559 Query 610 ERMGLAI 616 + G ++ Sbjct 560 GKHGESL 566 Score = 40.0 bits (92), Expect = 0.087, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 37/62 (60%), Gaps = 3/62 (5%) Query 18 EEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGK 75 E+M PT IQ +P +L D+ + A+TGSGKT AF++P++ + ++K + + K Sbjct 161 EKMRIQKPTSIQKLVLPQLLSSKNNDLFIHAQTGSGKTLAFALPILSKIL-SMKTRVDRK 219 Query 76 KG 77 G Sbjct 220 SG 221 >sp|Q9SW44|RH16_ARATH DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana OX=3702 GN=RH16 PE=2 SV=1 Length=626 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 92/363 (25%), Positives = 137/363 (38%), Gaps = 91/363 (25%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP A I+ PSREL +Q + + +L+ + + ++A D + L +I+V Sbjct 120 APSAFILVPSRELCQQVYTEVSSLIELC-RVQLKAVQLTSSMSASDMRNALAGLPEILVS 178 Query 346 TPGRLDDLVSTGKLNLSQVR----FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 TP + + G L + V LVLDEAD LLS GY D + + + IP +R Sbjct 179 TPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTSIIP------RRC 232 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 Q ++ SAT S DV+KL + I+H P + L D VP N + W Sbjct 233 QCLLMSATTSS-DVEKLKKLILHNPIVLTL-----TEDNDKEEAVPSN--VQQFW----- 279 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + + + E ++ + +IF T ID Sbjct 280 -------ISCSAQDKLLHILALLKLEVVQ----------------KKILIFINT-IDMGF 315 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV------- 574 + F+++ G L+G+ + R LE+F G +LI TD Sbjct 316 RLKLFLEKFG--------IKSAILNGELPQNSRLHILEQFNAGLFDYLIATDDNSQTKKQ 367 Query 575 ----------------------------AARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 RGID V VIN +P Y+HRIGR Sbjct 368 KEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVHTVINFDMPQSVTGYIHRIGRT 427 Query 607 GRA 609 GRA Sbjct 428 GRA 430 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 41/63 (65%), Gaps = 0/63 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+G+ + +A+ + PT IQ +IP IL G DV+ A+TGSGKT A+ +P++Q Sbjct 47 SFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQ 106 Query 63 IVY 65 ++ Sbjct 107 KLF 109 >sp|Q6C3J3|MRH4_YARLI ATP-dependent RNA helicase MRH4, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=MRH4 PE=3 SV=1 Length=514 Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 80/339 (24%), Positives = 153/339 (45%), Gaps = 65/339 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +++I+ P+ EL++Q +KQF++ + ++ G + ++ N +D++V TP Sbjct 200 RSVILVPTLELSQQVGQVLKQFEEPLG---IKTFASAFGQSHQEIAKAFNNRLDVLVTTP 256 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 +L T + NL LV+DEAD L + D + +Q+P++ C+ Sbjct 257 QKLQ---QTREKNLGGATHLVVDEADTLFDTNFIDSTTDVISQMPKLK----------CA 303 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 A + + K K+ F HVVV P+ + + HIR Sbjct 304 AFVAATVSKSFLRKLRSF---------------YPHVVVIAAPRLHAIPD-----HIRFS 343 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK--MDQAIIFCRTKIDCDNLEQY 525 V +P ++ + +L+ YA+ ++ K + + ++F K L++ Sbjct 344 VVDVN-------KAPYYNNKKVALLQALYAISHSQKQKNYVRRVVVFRNRKEHIPELKK- 395 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK-----------GDVRFLICTDV 574 F+++ G P LHG + HER + +E++ +VR L+ TD+ Sbjct 396 FLEENGYP--------VDTLHGKQDLHERNEVVEKYTNMPDAADQTENARNVRVLLTTDI 447 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 A+RG+D+ + +V+ +P +K +++HR+GR GR R G Sbjct 448 ASRGMDMKNLRFVVLYDVPFDKTDFIHRVGRTGRFGREG 486 >sp|Q2TZH2|MRH4_ASPOR ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=mrh4 PE=3 SV=1 Length=628 Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 94/372 (25%), Positives = 153/372 (41%), Gaps = 60/372 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+ +I+ P+ EL Q +K + K R +I + R S L N G+DI+V Sbjct 267 PRVIILVPTSELVAQVGVKVKALAHTV---KYRSGMISSNLTPRRIKSTLFNPDGIDILV 323 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD L+ + F+ I +V ++L I Sbjct 324 STPHLLASIAKTEPYVLSRVSHLVLDEADSLMDRS---FLPTTTEIISKVAPSLRKL--I 378 Query 405 VCSATLHSF----------DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 +CSAT+ D+K+L+ +H ++P V VV + + R Sbjct 379 LCSATIPRSLDNLLRKRYPDIKRLTTPNLH-----------AIPRRVQLGVVDIQKEPYR 427 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 G ++ DV + E ++ + + V + + D+ F R Sbjct 428 -----GNRNLACADVIWSIGKAGDSEPSEPFASYVGPNIKKILVFVNEREEADEVAQFLR 482 Query 515 TK-IDCDNLEQ------------YFIQQGGGPD--------KKGHQFSCVCLHGDRKPHE 553 +K ID +L + F + P KK Q + H Sbjct 483 SKGIDAQSLSRDSSARKQEEILAEFTESAPPPSPEEIMLAQKKRRQEDAIPFELPEN-HN 541 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 + +N+ R + + L+ TD+A+RGID V VI +P +++HR+GR+GR + G Sbjct 542 KPENVRRL--ANTKVLVTTDLASRGIDTLPVKTVILYHVPHTTIDFIHRLGRLGRMNKRG 599 Query 614 LAISLVATEKEK 625 I LV + K Sbjct 600 RGIVLVGKKDRK 611 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 42/86 (49%), Gaps = 22/86 (26%) Query 1 MAAFSEMGVMPEI-----AQAVEEMDWLLPTDIQAESIPLI------------LGGGD-- 41 + +F ++P + +QA+ + + PT IQ +IP + L GD Sbjct 136 ITSFDHFPLLPVVRHSIFSQALPGLVDVTPTPIQRLAIPKLMEDSPDGKRGTKLEDGDPQ 195 Query 42 ---VLMAAETGSGKTGAFSIPVIQIV 64 L+AAETGSGKT A+ +P++ V Sbjct 196 YDQYLLAAETGSGKTLAYLLPLVDAV 221 >sp|Q5UQD1|YR458_MIMIV Putative ATP-dependent RNA helicase R458 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R458 PE=3 SV=1 Length=524 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 70/133 (53%), Gaps = 7/133 (5%) Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K E + +K+ ++ QAIIF +I+ N + + + P S HGD Sbjct 370 KKEIILDLLKQCRIAQAIIFA-NRIETANEIKKLLDEQEVP------ISSAVFHGDLPAV 422 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 RK + F + +R LI TD+ +RG+D+ G+ V N +PD + Y+HR+GR GR R Sbjct 423 TRKNIHKDFVENKIRLLISTDLTSRGLDVQGINVVFNFDMPDTLETYIHRVGRSGRYGRK 482 Query 613 GLAISLVATEKEK 625 G++ISL+ + K Sbjct 483 GVSISLILVNQNK 495 >sp|Q9SF41|RH45_ARATH DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana OX=3702 GN=RH45 PE=3 SV=1 Length=989 Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 100/182 (55%), Gaps = 15/182 (8%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P L++ P+REL +Q ++I++F K + + + + GG Q+S L+ G +IVV Sbjct 468 DGPIGLVMAPTRELVQQIYSDIRKFSKALG---IICVPVYGGSGVAQQISELKRGTEIVV 524 Query 345 GTPGRLDDLV--STGKL-NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 TPGR+ D++ S+GK+ NL +V +LV+DEAD + G+ I R+ + + D Sbjct 525 CTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRI---VQNIRPD---R 578 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV--VPVNPKTDRLWERL 459 Q ++ SAT V+ L+ K+++ P + + G V + +V P + + RL E L Sbjct 579 QTVLFSATFPR-QVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLELL 637 Query 460 GK 461 G+ Sbjct 638 GE 639 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/72 (38%), Positives = 45/72 (63%), Gaps = 0/72 (0%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 +++++ FK LI T VAARG+D+ + V+N P+ ++YVHR+GR GRA R G Sbjct 653 QEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKG 712 Query 614 LAISLVATEKEK 625 A++ ++ + K Sbjct 713 CAVTFISEDDAK 724 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 39/57 (68%), Gaps = 0/57 (0%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + G+ +I ++++++ P IQA+++P+I+ G D + A+TGSGKT F +P+++ Sbjct 400 QTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLR 456 >sp|P38112|MAK5_YEAST ATP-dependent RNA helicase MAK5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MAK5 PE=1 SV=1 Length=773 Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 97/366 (27%), Positives = 147/366 (40%), Gaps = 67/366 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQF-KKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIV 343 P +LI P+RELA Q +++K+ + + + L + GG++ + Q +L +N IV Sbjct 244 PISLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKYDNSGQIV 303 Query 344 VGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSD---------FINRMHNQI 391 + TPGR +L+ +T S+V L+LDEAD LL G+ D + R N+ Sbjct 304 IATPGRFLELLEKDNTLIKRFSKVNTLILDEADRLLQDGHFDEFEKIIKHLLVERRKNR- 362 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSE----KIMHFPTWVDLKGEDSVPDTVHHVVVP 447 K Q ++ SAT KLS K F ED + + H+ Sbjct 363 ENSEGSSKIWQTLIFSATFSIDLFDKLSSSRQVKDRRFKN-----NEDELNAVIQHL--- 414 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS--PEMWSEAIKILKGEYAVRAIKEHK 505 + K H + V N +S E E + + Y + Sbjct 415 -----------MSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFP 463 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IFC ID ++ G P +H R ++LERFK+ Sbjct 464 -GTTLIFCNA-IDSVKKLTVYLNNLGIP--------AFQIHSSMTQKNRLKSLERFKQQS 513 Query 566 VR----------------FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 + LI +DVAARG+DI GV +VI+ LP Y+HR GR RA Sbjct 514 AKQKTINHSNPDSVQLSTVLIASDVAARGLDIPGVQHVIHYHLPRSTDIYIHRSGRTARA 573 Query 610 ERMGLA 615 G++ Sbjct 574 GSEGVS 579 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 39/50 (78%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 I Q+++ +++L PT+IQ +SIP+I+ G DV+ A TGSGKT A+ IP+++ Sbjct 182 ILQSLQNLNFLRPTEIQKKSIPVIMQGVDVMGKASTGSGKTLAYGIPIVE 231 >sp|Q6C0X2|DHH1_YARLI ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DHH1 PE=3 SV=1 Length=522 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 59/114 (52%), Gaps = 9/114 (8%) Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 ++Q+IIFC + + + L + + G +SC H R + F+ G Sbjct 265 INQSIIFCNSTVRVELLARKITELG---------YSCYYSHAKMIQSHRNRVFHEFRNGT 315 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +G+AI+L+ Sbjct 316 CRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGIAINLI 369 Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 50/150 (33%), Positives = 82/150 (55%), Gaps = 10/150 (7%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +ALI+ P+RELA QT K K++ ++ ++ GG RD + LE+ V ++V Sbjct 95 NKIQALIMVPTRELALQTSQVCKTLGKHLG---IKVMVTTGGTNLRDDIMRLEDTVHVLV 151 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GTPGR+ DL G +LS+ ++DEAD LLS ++ I ++ + P+ Q++ Sbjct 152 GTPGRVLDLAGKGVADLSESPMFIMDEADKLLSPDFTPIIEQVLHFFPE------DRQIL 205 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 + SAT VK ++ +H P ++L E Sbjct 206 LFSATF-PLTVKAFMDRNLHKPYEINLMDE 234 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP + Sbjct 28 TGFEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPAL 87 Query 62 QIV 64 Q V Sbjct 88 QQV 90 >sp|Q6ATJ8|RH16_ORYSJ DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0728800 PE=2 SV=1 Length=670 Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 94/379 (25%), Positives = 159/379 (42%), Gaps = 38/379 (10%) Query 264 GYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 Y++ H + + +AP I+ P+REL +Q N ++ + KL+ + + Sbjct 145 AYLLPMLHELLKLSAEGRIRKSAPNVFILVPTRELCQQVHNEASSLLEFCTS-KLKVVQV 203 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR----FLVLDEADGLLSQG 379 ++ +D L +I+V TP + +S G + S ++ ++LDEAD LLS Sbjct 204 NASMSDKDIKVALSGPPNILVTTPACVASCISKGIIRGSSIKESLSMMILDEADLLLSYR 263 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP-----TWVDLKGE 434 D I + IP + Q I+ SAT S D++KL++ ++H P T V + Sbjct 264 CEDDIKALVPHIP------RSCQSILMSAT-SSADIEKLTKLLLHNPFILTLTEVGHAKD 316 Query 435 DSVPDTVHHVVVPVNPKTDRLWER-LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 D +P V + + K L+ L K + V N+ A ++ E I Sbjct 317 DLIPKNVQQFWISCDAKDKMLYILVLLKLELIQKKVLIFVNSIDSAFKLRLFLEKFGIRS 376 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + ++ F D Y I K+ Q + G++K Sbjct 377 SVLNAELPQNSRLHIIQAFNARLFD------YLIATDDNKSKEERQAN----KGNKKDSR 426 Query 554 --RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 RKQ + D F + RGID V V+N +P + YVHR+GR GRA + Sbjct 427 VSRKQLQQTL---DAEFGVV-----RGIDFKNVFTVVNYDMPPDPAGYVHRVGRTGRANK 478 Query 612 MGLAISLVATEKEKVWYHV 630 G +ISLV+ ++ ++ + Sbjct 479 TGASISLVSPKENGIFEDI 497 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 31/78 (40%), Positives = 49/78 (63%), Gaps = 3/78 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+G+ ++ +A+ + T IQ E+IPLIL G DV+ A+TGSGKT A+ +P++ Sbjct 93 SFDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPML- 151 Query 63 IVYETLKDQQEGKKGKTT 80 +E LK EG+ K+ Sbjct 152 --HELLKLSAEGRIRKSA 167 >sp|Q7XJN0|RH17_ARATH DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana OX=3702 GN=RH17 PE=2 SV=1 Length=609 Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 88/359 (25%), Positives = 146/359 (41%), Gaps = 46/359 (13%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+REL Q +++ + ++GG + + L G+ I++ TPG Sbjct 107 ALVIVPTRELCLQVYETLEKLLHRFH--WIVPGYVMGGEKKAKEKARLRKGISILIATPG 164 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM----------HNQIPQVTSD 397 RL D L +T +R+++ DEAD +L GY I ++ + + Sbjct 165 RLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPK 224 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG----------EDSVPDT-VHHVVV 446 G + Q ++ SATL+ V L++ + P + L + PD+ +V+ Sbjct 225 GIQKQNLLLSATLND-KVNDLAKLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVI 283 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 VN + L E G I + V GA + S +LK + A + Sbjct 284 HVNKSANPLSEDYG---IPSQLVQRYLRVPCGARLVALLS----VLKNLFEREASQ---- 332 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ-------FSCVC--LHGDRKPHERKQN 557 + ++F T+ D + P+ + + C LHG + +R+ Sbjct 333 -KVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRRSA 391 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 FK L+ TDVAARG+D V +I P E YVHR+GR R G A+ Sbjct 392 FGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEAL 450 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (2%) Query 3 AFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS +G+ +++ Q E M + PT +QA++IP+IL G DVL+ A TG+GKT A+ P+I Sbjct 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89 >sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=ROK1 PE=3 SV=1 Length=570 Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 87/320 (27%), Positives = 147/320 (46%), Gaps = 61/320 (19%) Query 288 KALIVEPSRELAEQT-LNNIKQFKK-YIDNPK-LRELLIIGGVAARDQLSVL-ENGVDIV 343 K LI+ P++ELA Q L IK + ++D + L+ L+ ++A+ + V+ + DI+ Sbjct 203 KGLIISPTKELANQIFLECIKLSNRIFLDKKRPLQVALLSKSLSAKLRNKVISDKKYDII 262 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TP RL D+V L+LSQV+ L+ DEAD L + F+ + + + + R + Sbjct 263 VSTPLRLIDVVKNEALDLSQVKHLIFDEADKLFDKT---FVEQSDDILSSCSHSSLRKSM 319 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 SAT+ S +V+++++ IM P V + +++ ++ +V + +L Sbjct 320 F--SATIPS-NVEEIAKSIMMDPVRVIIGHKEAANTSIEQKLVFCGNEEGKL-------- 368 Query 464 IRTDDVHAKDNTRPGANSPE--MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + K + G P ++ E+I K Y H+M ++ +D + Sbjct 369 -----IAIKQLVQEGEFKPPVIIFLESITRAKALY-------HEM----MYDSLNVDVIH 412 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 E+ +Q R + +ERFK GD+ LI TDV ARG+D Sbjct 413 AERTQVQ-------------------------RNKIIERFKSGDLWCLITTDVLARGVDF 447 Query 582 HGVPYVINVTLPDEKQNYVH 601 GV VIN +P Q YVH Sbjct 448 KGVNLVINYDVPRTAQAYVH 467 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/61 (51%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +H +R +R + +ERFK GD+ LI TDV ARG+D GV VIN +P Q YVHRI Sbjct 410 VIHAERTQVQRNKIIERFKSGDLWCLITTDVLARGVDFKGVNLVINYDVPRTAQAYVHRI 469 Query 604 G 604 G Sbjct 470 G 470 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 31/53 (58%), Positives = 34/53 (64%), Gaps = 2/53 (4%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 PT IQ E+IPL L D+L A TGSGKT AF IP+IQ V KD Q G KG Sbjct 154 PTPIQCEAIPLALNNRDMLACAPTGSGKTLAFLIPLIQQVIND-KDTQ-GLKG 204 >sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=ROK1 PE=3 SV=1 Length=564 Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 83/322 (26%), Positives = 141/322 (44%), Gaps = 65/322 (20%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL---LIIGGVAARDQLSVL-ENGVDIV 343 K LI+ P++ELA Q + I K R L L+ + A+ + V+ + DI+ Sbjct 194 KGLIISPTKELANQIFIECFKLSHKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDII 253 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR--L 401 + TP RL D+V L+LS+V+ L+ DEAD L + + + Q + S + L Sbjct 254 ISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFDKTFVE-------QSDDILSACREPSL 306 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + + SAT+ S +V+++++ IM P V + +++ + ++ + +L Sbjct 307 RKAMFSATIPS-NVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKL------ 359 Query 462 SHIRTDDVHAKDNTRPGANSPE--MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + + + G P ++ E+I K Y +++ R +D Sbjct 360 -------IAIRQLVQEGEFKPPIIIFLESITRAKALY-----------HELMYDRINVDV 401 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + E+ +Q R + +ERFK G++ LICTDV ARGI Sbjct 402 IHAERTALQ-------------------------RDRIIERFKTGELWCLICTDVLARGI 436 Query 580 DIHGVPYVINVTLPDEKQNYVH 601 D GV VIN +P Q YVH Sbjct 437 DFKGVNLVINYDVPGSSQAYVH 458 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 2/53 (4%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 PT IQ E IP+ L DVL TGSGKT AF IP++Q + + Q G KG Sbjct 145 PTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQIIDD--KQTAGLKG 195 >sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ROK1 PE=1 SV=1 Length=564 Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 83/322 (26%), Positives = 141/322 (44%), Gaps = 65/322 (20%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL---LIIGGVAARDQLSVL-ENGVDIV 343 K LI+ P++ELA Q + I K R L L+ + A+ + V+ + DI+ Sbjct 194 KGLIISPTKELANQIFIECFKLSYKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDII 253 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR--L 401 + TP RL D+V L+LS+V+ L+ DEAD L + + + Q + S + L Sbjct 254 ISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFDKTFVE-------QSDDILSACREPSL 306 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + + SAT+ S +V+++++ IM P V + +++ + ++ + +L Sbjct 307 RKAMFSATIPS-NVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKL------ 359 Query 462 SHIRTDDVHAKDNTRPGANSPE--MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + + + G P ++ E+I K Y +++ R +D Sbjct 360 -------IAIRQLVQEGEFKPPIIIFLESITRAKALY-----------HELMYDRINVDV 401 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + E+ +Q R + +ERFK G++ LICTDV ARGI Sbjct 402 IHAERTALQ-------------------------RDRIIERFKTGELWCLICTDVLARGI 436 Query 580 DIHGVPYVINVTLPDEKQNYVH 601 D GV VIN +P Q YVH Sbjct 437 DFKGVNLVINYDVPGSSQAYVH 458 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/53 (49%), Positives = 31/53 (58%), Gaps = 2/53 (4%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 PT IQ E IP+ L DVL TGSGKT AF IP++Q + + Q G KG Sbjct 145 PTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQIIDD--KQTAGLKG 195 >sp|A6ZL85|MAK5_YEAS7 ATP-dependent RNA helicase MAK5 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=MAK5 PE=3 SV=1 Length=769 Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 96/360 (27%), Positives = 144/360 (40%), Gaps = 67/360 (19%) Query 287 PKALIVEPSRELAEQTLNNIKQF-KKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIV 343 P +LI P+RELA Q +++K+ + + + L + GG++ + Q +L +N IV Sbjct 240 PISLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKYDNSGQIV 299 Query 344 VGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSD---------FINRMHNQI 391 + TPGR +L+ +T S+V L+LDEAD LL G+ D + R N+ Sbjct 300 IATPGRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLVERRKNR- 358 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSE----KIMHFPTWVDLKGEDSVPDTVHHVVVP 447 K Q ++ SAT KLS K F ED + + H+ Sbjct 359 ENSEGSSKIWQTLIFSATFSIDLFDKLSSSRQVKDRRFKN-----NEDELNAVIQHL--- 410 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS--PEMWSEAIKILKGEYAVRAIKEHK 505 + K H + V N +S E E + + Y + Sbjct 411 -----------MSKIHFNSKPVIIDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFP 459 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IFC ID ++ G P +H R ++LERFK+ Sbjct 460 -GTTLIFCNA-IDSVKKLTVYLNNLGIP--------AFQIHSSMTQKNRLKSLERFKQQS 509 Query 566 VR----------------FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 + LI +DVAARG+DI GV +VI+ LP Y+HR GR RA Sbjct 510 AKQKTINHSNPDSVQLSTVLIASDVAARGLDIPGVQHVIHYHLPRSTDIYIHRSGRTARA 569 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 39/50 (78%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 I Q+++ +++L PT+IQ +SIP+I+ G DV+ A TGSGKT A+ IP+++ Sbjct 178 ILQSLQNLNFLRPTEIQKKSIPVIMQGVDVMGKASTGSGKTLAYGIPIVE 227 >sp|Q6CTN7|MAK5_KLULA ATP-dependent RNA helicase MAK5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=MAK5 PE=3 SV=1 Length=796 Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 100/415 (24%), Positives = 177/415 (43%), Gaps = 70/415 (17%) Query 290 LIVEPSRELAEQTLNNIKQ-FKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVVGT 346 LI P+RELA Q +++++ + K K L + GG++ + Q +L + I+V T Sbjct 293 LIFTPTRELAHQVTDHLQKVWTKMNKLNKYTILSLTGGLSIQKQERILKYDGSGRIIVAT 352 Query 347 PGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI-----PQVTSDG 398 PGR +L+ +++ LVLDEAD LL G+ D ++ + + + DG Sbjct 353 PGRFLELLERNPDLIPRFAKIDTLVLDEADRLLQDGHFDEFEKILKLLGKARKIKTSIDG 412 Query 399 KRL----QVIVCSATLHSFDVKKLSEKIMHFPTWVDLK---GEDS-VPDTVHHVVVPVNP 450 K Q ++ SAT S D+ +K +W LK GE++ + ++H++ + Sbjct 413 KPTGSGWQTMIFSATF-SLDLFTKLDKT----SWKILKTAGGENNEMEQVLNHLMKKIQF 467 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K+ + H T V E E + + + Y I + + Sbjct 468 KSKPVIIDTNPEHKVTSQVK------------ESLIECLPMERDLYVYYFIMMYP-GTTL 514 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK------- 563 +FC L + + S +H R +NLE+FK+ Sbjct 515 VFCNAIDSVKKLNAFL---------NNLKISSFQIHSSMAQKNRLRNLEKFKEQSEKNSK 565 Query 564 -GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G LI +DVAARG+DI G+ +V++ LP Y+HR GR R + G+++ ++ + Sbjct 566 VGKPTILIASDVAARGLDISGIKHVLHYHLPRSADVYIHRSGRTARGDNEGVSV-MICSP 624 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI 677 +E + + + +T+ + T W N++ +L +EPDI Sbjct 625 QESMG---PLRKLRKVLSTKKSSNPRKTKWQNDVPMLP------------LEPDI 664 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 54/97 (56%), Gaps = 7/97 (7%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI-QIVYETLKDQQEGKKGKTTIKT 83 PT+IQ +SIPL L G +++ A TGSGKT A+ IP+I Q++ +T D+ G T + Sbjct 242 PTEIQLKSIPLALKGHNIMGKASTGSGKTLAYGIPIIEQLIKDTSNDRSIGLIFTPTREL 301 Query 84 GASVLNKWQ-----MNPYDRGSAFAIGSDGLCCQSRE 115 V + Q MN ++ + ++ + GL Q +E Sbjct 302 AHQVTDHLQKVWTKMNKLNKYTILSL-TGGLSIQKQE 337 >sp|Q10RI7|RH38_ORYSJ DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0158200 PE=3 SV=1 Length=505 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 96/384 (25%), Positives = 164/384 (43%), Gaps = 84/384 (22%) Query 266 IVKSQHSGNAQVT------QTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYID--- 314 ++ H+G+ + T ++ PN +A+ + P+RELA+Q + + + K+ Sbjct 143 LIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGITC 202 Query 315 ----NPKLRELLIIGGVAA-RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 P ++ + I + DQ +V+GT G L ++ K+ + ++ LV Sbjct 203 ACAIPPAQKDYVPIAKMPKITDQ---------VVIGTSGTLMKWINHKKILTNDIKILVF 253 Query 370 DEADGLLSQ-GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 DEAD +L++ G+ R+ I Q ++ G QV++ SAT + E++ F T Sbjct 254 DEADHMLAEDGFRSDSERIMRDI-QRSAGG--CQVLLFSATFN--------ERVKDFVTR 302 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 V G + + V K + E++ + ++ D AK Sbjct 303 VIKDG--------NQIFVK---KEELTLEKVKQYKVQVPDERAK---------------- 335 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 I ++K + K+ Q IIF RTK ++ + + C + G Sbjct 336 IAVIKDKIFEFG---QKVGQVIIFVRTKQSTKDVHNALTLE---------DYVCSSIQGS 383 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------DEK--QNYV 600 ER++ ++ FK G + LI TDV ARG D V VIN +P DE + Y+ Sbjct 384 LDQSEREKIIQEFKNGYTKVLISTDVLARGFDQAQVNLVINYDMPIKFGTRDEPDYEVYL 443 Query 601 HRIGRVGRAERMGLAISLVATEKE 624 HRIGR GR R G +L+ E + Sbjct 444 HRIGRAGRFGRKGAVFNLLCGETD 467 Score = 40.4 bits (93), Expect = 0.060, Method: Compositional matrix adjust. Identities = 23/66 (35%), Positives = 40/66 (61%), Gaps = 3/66 (5%) Query 2 AAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 AAF ++ + PE+ + + +EM + P+ IQA ++P+IL D++ A GSGKT F + Sbjct 100 AAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVL 159 Query 59 PVIQIV 64 ++ V Sbjct 160 GMLSRV 165 >sp|Q0E2Q3|IF4A2_ORYSJ Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0221300 PE=3 SV=2 Length=416 Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/359 (24%), Positives = 152/359 (42%), Gaps = 68/359 (19%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL++ P+ +LA +T N I +++ + GG +A + +L GV + VGTP Sbjct 116 QALVLVPTHDLAHETQNVIGVLGQFLSA---KAHAFCGGTSAHEDQQILSTGVQVAVGTP 172 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 + ++ L +R VLDEAD +L +G+ D I+ + +P T G S Sbjct 173 CHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFG------FFS 225 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 A++ S + ++ K M+ P ++VP Sbjct 226 ASM-SHEALEMCRKYMNKPV---------------EIIVP-------------------- 249 Query 468 DVHAKDNTRPGANSPEMWSEAIK-ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +D G N + + K K + ++ ++IIF T+ +L + Sbjct 250 ----RDEELEGINVKQFYVNVEKEDCKLDKLCGLFDTMEITRSIIFVNTRHHAKSLTEKI 305 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +G ++ +HG R + ++ F+ G R LI TD+ RGID+ P Sbjct 306 ---------RGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL--RGIDVLRAPA 354 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 I LP + Y+ + + G+ R G+AIS + + E+V+ S+ K C NT+++E Sbjct 355 AIFYDLPTQPVCYLRHV-QSGQHGRKGVAISFITSTDERVF----STIQKFC-NTQIEE 407 >sp|Q7SBR1|MRH4_NEUCR ATP-dependent RNA helicase mrh4, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-15 PE=3 SV=1 Length=625 Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 161/402 (40%), Gaps = 87/402 (22%) Query 270 QHSGNAQVTQ--TKFLPNA----PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 + G A V++ KF P+ P+ +++ P+ EL +Q + K+ Y K + + Sbjct 248 ERRGGAPVSEWIEKFEPHPNTARPRVVVLVPTAELVDQVTSVAKKLAHYT---KFKVRPL 304 Query 324 IGGVAA-RDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 ++ R+Q ++ GVD++V TP L + + LS+V LV+DEAD LL + +S Sbjct 305 SASISPLRNQRNLYSPIGVDMIVSTPHLLATIAKSDPNVLSRVSHLVIDEADSLLDRSFS 364 Query 382 -DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 D + + +P + Q+I+CSAT+ P +D E+ P Sbjct 365 GDTTSIVDRAMPSLK------QLILCSATI---------------PRRLDTYMEEQFP-Y 402 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 ++ + P R + LG + D N + A + +WS + K E Sbjct 403 INRITTPNLHAIPRRVQ-LGVIDVSKDPYR---NNKMLACADAIWSIGKEAAKHEGPKSE 458 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 I ++ ++F + + Y + +G + LH D + H + + L Sbjct 459 IDVKRI---MVFVNERETTQQVADYLVSKG---------IDAIALHRDTEEHRKSEMLAS 506 Query 561 FKKGD-------------------------------------VRFLICTDVAARGIDIHG 583 F + + ++ TD+A+RGID Sbjct 507 FTSNEPMKISRPADDDVAAAAAEGGKAGGAVSSSPTRRHLPNTKVIVATDLASRGIDTLA 566 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V YV+ +P +++HR+GR GR R G I LV + + Sbjct 567 VRYVVLYDVPHTTIDFIHRLGRAGRMNRRGRGIVLVGKDDRR 608 Score = 40.8 bits (94), Expect = 0.049, Method: Compositional matrix adjust. Identities = 24/84 (29%), Positives = 42/84 (50%), Gaps = 20/84 (24%) Query 1 MAAFSEMGVMPEIAQAVEE-----MDWLLPTDIQAESIPLILGGG--------------- 40 + AF + ++P + +A+ + M + PT +Q +IP +LG Sbjct 143 IQAFDQFDLLPVVKEAIAQEALKGMTEIKPTPVQRLAIPALLGQPMGRKPRRPKSDNGRE 202 Query 41 DVLMAAETGSGKTGAFSIPVIQIV 64 + L+AAETGSGKT A+ +P + + Sbjct 203 EFLLAAETGSGKTLAYLVPAVNAI 226 >sp|Q66HG7|DDX59_RAT Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus OX=10116 GN=Ddx59 PE=2 SV=1 Length=589 Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 75/348 (22%), Positives = 146/348 (42%), Gaps = 91/348 (26%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 P ALI+ P+RELA Q K+ + + P+++ +L++GG+ QL L+ V Sbjct 271 TPSALILTPTRELAIQIERQAKELMRGL--PRMKTVLLVGGLPLPPQLYRLQQHV----- 323 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 +AD +L G+ + + P SD Q ++ Sbjct 324 -------------------------KADTMLKMGFQQQVLDVLEHTP---SD---CQTVL 352 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP-DTVHHVVVPVN--PKTDRLWERLGKS 462 SAT+ + +L+++++H P + + G+ ++P +V +++ V K +L+E L Sbjct 353 VSATIPD-SIDQLADQLLHNPVRI-VTGDKNLPCSSVRQIILWVEDPAKKKKLFEILNDQ 410 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + V + + GA+ + SEA++ + G Sbjct 411 KLFKPPVLVFVDCKLGAD---LLSEAVQKITG---------------------------- 439 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 S +H ++ ER++ L+ +GD ++ T + RG+D+ Sbjct 440 -----------------LSSTSIHSEKSQVERREILKGLLEGDYEVVVSTGILGRGLDLV 482 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V V+N +P YVH++GRVGR + G AI+ + +++++ V Sbjct 483 NVKLVVNFDMPSSLDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDV 530 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F G + Q +++ + +PT IQ + IP+ L G D+L +A+TGSGKT AF +PVI Sbjct 205 FEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262 >sp|Q9SIZ8|RKP_ARATH E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana OX=3702 GN=RKP PE=2 SV=2 Length=1280 Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 57/193 (30%), Positives = 88/193 (46%), Gaps = 20/193 (10%) Query 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKSHNKQ 178 RA + KGK YEV+ G+ ++GW+T+ +G + F G NK+ Sbjct 139 RANACIWKGKWMYEVALETSGIQQLGWATLACPFTDQKGVGDADDSYAFDGRRVSKWNKE 198 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFE-IPPHMKNQALFPACVLKNAE 237 + YG+ + D IGC +D++ + F +NG LG AF I +PA L E Sbjct 199 AEPYGQSWVAGDVIGCCIDLNCDEIYFYRNGVSLGAAFTGIRKLGPGFGYYPAISLSQGE 258 Query 238 -LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSR 296 + NFG FK+ P DGF L +AP + ++ L L+ P R Sbjct 259 RCELNFGAYPFKY-PVDGFQPLQEAPTRFSFATE------------LLRCFSRLLDRPDR 305 Query 297 ELAEQTLNNIKQF 309 LA+ TL+ +++F Sbjct 306 SLAD-TLSRLRRF 317 >sp|Q9C8S9|RH48_ARATH Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 GN=RH48 PE=3 SV=1 Length=798 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 85/340 (25%), Positives = 153/340 (45%), Gaps = 63/340 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR-DQLSVLENGVDIVVGTP 347 ALI+ P+RELA Q K K+ D ++ L IGG + DQ + I++ TP Sbjct 408 ALILCPTRELASQIAAEGKALLKFHDGIGVQTL--IGGTRFKLDQQRLESEPCQILIATP 465 Query 348 GRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GRL D + S L ++ ++DEAD LL G+ + ++ + +P ++ Q + Sbjct 466 GRLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDCLP------RQRQSL 519 Query 405 VCSATLHSFDVKKLSEKIMHFP-TWVDLKGEDSVP--DTVHH-VVVPVNPKTDRLWERLG 460 + SAT+ +V+++S+ ++ +++D G V D V +V + L L Sbjct 520 LFSATIPK-EVRRVSQLVLKRDHSYIDTIGLGCVETHDKVRQSCIVAPHESHFHLVPHLL 578 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K HI N+P+ Y + I+FC T + Sbjct 579 KEHIN--------------NTPD------------YKI-----------IVFCSTGM-VT 600 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +L +++ + + +H + R + + FK+ + L+ +DV+ARG++ Sbjct 601 SLMYTLLRE--------MKLNVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMN 652 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 V VI V +P +++ Y+HR+GR GR + G + L+A Sbjct 653 YPDVTLVIQVGIPSDREQYIHRLGRTGREGKGGEGLLLIA 692 Score = 40.0 bits (92), Expect = 0.079, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 35/65 (54%), Gaps = 0/65 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E + P +A+ L T +Q ++ L G D L+ A+TG+GK+ AF +P I+ Sbjct 330 FDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 389 Query 64 VYETL 68 V + + Sbjct 390 VLKAM 394 >sp|A1DGF2|MRH4_NEOFI ATP-dependent RNA helicase mrh4, mitochondrial OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=mrh4 PE=3 SV=1 Length=631 Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 94/368 (26%), Positives = 155/368 (42%), Gaps = 53/368 (14%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVV 344 P+A+I+ P+ EL Q +K + K R +I + R + L +G+DI+V Sbjct 271 PRAIILVPTSELVAQVGVKVKALSHTV---KYRSGMISSNLTPRRIKNTLFHPDGIDILV 327 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD LL + ++ + I + ++L I Sbjct 328 ATPHLLASIAKTEPYVLSRVSHLVLDEADSLLDRSFAPTTTEI---ISKAAPSLRKL--I 382 Query 405 VCSATLHSF----------DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 +CSAT+ D+K+L+ +H ++P V VV + R Sbjct 383 LCSATIPRSLDNLLRKRYPDIKRLTTPNLH-----------AIPRRVQLGVVDIEKDPYR 431 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L + + A D G + + + KIL V + + D+ F R Sbjct 432 GNRSLACADVIWSIGKAGDAESEGPYASYVAPKTKKIL-----VFVNEREEADEVAQFLR 486 Query 515 TK-IDCDNL---------EQYFIQQGGGPDKKGHQFSCVC----LHGDRKPHE--RKQNL 558 +K ID +L E+ + P + H D P E +K N Sbjct 487 SKGIDAQSLSRDSDARKQEEILAEFTEAPPPPTPDEILLAQKQRRHEDAIPFEMPQKTNQ 546 Query 559 ERFKK-GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 + ++ + + L+ TD+A+RGID V VI +P +++HR+GR+GR + G + Sbjct 547 DSSRRLANTKVLVTTDLASRGIDTLAVKTVILYHVPHTTIDFIHRLGRLGRMGKRGRGVV 606 Query 618 LVATEKEK 625 LV + K Sbjct 607 LVGKKDRK 614 Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 41/86 (48%), Gaps = 22/86 (26%) Query 1 MAAFSEMGVMPEI-----AQAVEEMDWLLPTDIQAESIPLILGGGDV------------- 42 + +F + ++P + +QA+ + + PT IQ +IP +L Sbjct 140 ITSFDQFQLLPVVRNSISSQALPGLVDVTPTPIQRLAIPRLLEEPKTEKKPTKADDDEPQ 199 Query 43 ----LMAAETGSGKTGAFSIPVIQIV 64 L+AAETGSGKT A+ +PV+ V Sbjct 200 YDQYLLAAETGSGKTLAYLLPVVDAV 225 >sp|Q6FST5|DBP6_CANGA ATP-dependent RNA helicase DBP6 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP6 PE=3 SV=1 Length=651 Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 86/362 (24%), Positives = 140/362 (39%), Gaps = 85/362 (23%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV---- 340 N + LI+ P++ L Q + Q + G + +S LEN Sbjct 277 NKLRVLIILPTKLLINQVFQTMSQLAE--------------GTSLVITVSKLENSFNEEH 322 Query 341 --------DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 DI + TPGRL D ++ ++L ++FLVLDEAD LL+Q + N IP Sbjct 323 KRLLKTEPDIFITTPGRLVDHLTNSSISLRNLKFLVLDEADRLLNQSF-------QNWIP 375 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 +V S K S+K D +P ++ +V T Sbjct 376 EVMSKFK-------------------SDKF------------DQMPGSIIKMVFSATLTT 404 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD----- 507 + E+L + + A D+ + P + ++I + + + K+ Sbjct 405 N--TEKLNDLQLYNPTLFATDSVKLYNLPPTLQEYQLQIPSAKSVYKPLYLLKLLEQLSG 462 Query 508 -QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH----QFSCVCLHGDRKPHERKQNLERFK 562 + ++F R+ LE KGH Q ++ + E ++ + F Sbjct 463 GKTLVFVRSNESSLKLEVLLKSLI-----KGHMTTLQIVVHSINSNNSKAENRRLVTDFT 517 Query 563 K----GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 K LI TD+ +RGIDI + VIN +P Q YVHR GR RA + G A ++ Sbjct 518 KESLPNQTNVLITTDLMSRGIDIENIANVINYDVPISSQQYVHRCGRTARANKDGKAYNM 577 Query 619 VA 620 + Sbjct 578 LV 579 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 16/25 (64%), Positives = 21/25 (84%), Gaps = 0/25 (0%) Query 40 GDVLMAAETGSGKTGAFSIPVIQIV 64 GD+L+ A TGSGKT A+SIP+IQ + Sbjct 247 GDILVNASTGSGKTLAYSIPIIQTL 271 >sp|A6R918|SPB4_AJECN ATP-dependent rRNA helicase SPB4 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=SPB4 PE=3 SV=2 Length=676 Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 86/348 (25%), Positives = 142/348 (41%), Gaps = 80/348 (23%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY-----------------ID--NP---------KLRE 320 A+++ P+RELA Q N + + +D NP K+ Sbjct 97 AILISPTRELATQIYNVLLSLLAFHGPSAARLQRTENNSGEVDESNPASSYPPSTLKIVP 156 Query 321 LLIIGGVAA--RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLL 376 L++GG +D + L+ +++V TPGRL +L+S+ + SQ F LVLDEAD LL Sbjct 157 QLLLGGTTTPTQDLSAFLKQSPNVLVSTPGRLLELLSSPHAHCSQSSFEVLVLDEADRLL 216 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 G+ + + ++ ++P+ G L S V + ++I+ V L+ Sbjct 217 DLGFKEDLQKILQRLPKQRRTG-----------LFSASVSEAVDQIIR----VGLRN--- 258 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 P + V + R L +++ T H K+ +Y Sbjct 259 -PVKIAVKVKGAGLEDKRTPASLQMTYLLTPPTH-------------------KLPAVKY 298 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQY-FIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 V + + F C ++ Y I PD+ F+ + LHG P R+ Sbjct 299 IVSTLSPTPQRSILYFS----TCAAVDYYQHILPCILPDR----FTTIPLHGKHPPQVRQ 350 Query 556 QNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 +N RF L+ TDVAARG+DI V VI + P + + ++HR Sbjct 351 KNFTRFVNSVTSSILLTTDVAARGLDIPAVDLVIQIDPPTDPKAFLHR 398 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 I A+ M + T +QA +IPL + DV++ A TGSGKT AF IPV++ Sbjct 32 ILDAISAMGFSRMTPVQASTIPLFMAHKDVVVEAVTGSGKTLAFLIPVVE 81 >sp|A5DC85|DBP9_PICGU ATP-dependent RNA helicase DBP9 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP9 PE=3 SV=2 Length=586 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 84/373 (23%), Positives = 149/373 (40%), Gaps = 91/373 (24%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K++I+ P++ELA Q I++ Y ++ + ++ + V+ + +S+L +I++ TP Sbjct 109 KSVILVPTKELANQVTKFIEKLLVYCNS--ITQINLATNVSDQVVVSLLSAKPEIIISTP 166 Query 348 GRLDDLVS--TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 RL ++ ++L+ V L +DE D +LS GY + + ++ + +P + LQ + Sbjct 167 SRLTTVLEKHASIVDLTTVTSLAIDEVDLMLSYGYMEDLQKLDDFLPI----KRNLQTYL 222 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT++ DV L + P + L + + RL + + R Sbjct 223 MSATVND-DVNDLKARFCTKPAIIKLNDNEENQN------------------RLVQFYAR 263 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 T SE K L +A K H + + ID + Sbjct 264 T-------------------SEFDKFL---FAYVIFKLHLIKGKTLAFVNNIDRGYRLKL 301 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA---------- 575 F++Q G C L+ + + R ++ F K LI +D + Sbjct 302 FLEQFG--------VRCCILNSELPVNSRLHIVDEFNKNVYNLLIASDESTEVTEQEGED 353 Query 576 ------------------------ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +RG+D V V+N LP ++YVHR+GR RA + Sbjct 354 DQEDSKPEKSKKKKGKKVDGEYGVSRGVDFRNVACVLNFDLPTTSRSYVHRVGRTARAGK 413 Query 612 MGLAISLVATEKE 624 G+A+S V KE Sbjct 414 AGMALSFVVPVKE 426 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/53 (51%), Positives = 37/53 (70%), Gaps = 1/53 (2%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVIQ 62 P + QAV ++ + PT IQ+ +IPL L D++ A TGSGKTGA+SIP+IQ Sbjct 44 PRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDIIAKASTGSGKTGAYSIPIIQ 96 >sp|Q4IJ56|DBP9_GIBZE ATP-dependent RNA helicase DBP9 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP9 PE=3 SV=1 Length=615 Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 53/152 (35%), Positives = 85/152 (56%), Gaps = 16/152 (11%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY----IDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 ALI+ P+RELA+Q I+QF + I KL + V+++ Q ++L N DIV+ Sbjct 116 ALILVPTRELADQVSKAIEQFASFCAKDISTAKLTD-----KVSSKVQRALLSNSPDIVI 170 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP V++ L++ ++ L+LDEAD +LS GYS+ + + +P K +QV+ Sbjct 171 STPSTAWQNVNSSALSIDKLTHLILDEADLVLSYGYSEDLENLSRSVP------KGVQVM 224 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 + SATL S +V L PT +DLK +++ Sbjct 225 MMSATL-SDEVDTLKGIFRRDPTLLDLKEKEA 255 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++G+ P + QA+ + + PT +Q ++IPL L G DVL A+ GSGKT A+ +P++ Sbjct 41 SFVDLGLDPRLLQAIAQQKFAKPTLVQRKAIPLALNGQDVLAKADCGSGKTAAYVLPLLS 100 Query 63 IV 64 + Sbjct 101 SI 102 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/44 (48%), Positives = 26/44 (59%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RG+D V VIN LP Y HRIGR RA + G+A+S V Sbjct 399 SRGVDFKKVSAVINFDLPTTASAYTHRIGRTARAGQTGMALSFV 442 >sp|Q06218|DBP9_YEAST ATP-dependent RNA helicase DBP9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP9 PE=1 SV=1 Length=594 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 87/153 (57%), Gaps = 8/153 (5%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +I+ P+RELA+Q N +++ Y + +R L I ++ ++L + +I+V Sbjct 93 NGTLGIILVPTRELAQQVYNVLEKLVLYC-SKDIRTLNISSDMSDSVLSTLLMDQPEIIV 151 Query 345 GTPGRLDDLVST--GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 GTPG+L DL+ T ++L++++FLV+DE D +L+ GY D +N++ +P K LQ Sbjct 152 GTPGKLLDLLQTKINSISLNELKFLVVDEVDLVLTFGYQDDLNKIGEYLPL----KKNLQ 207 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 + SATL+ D++ L +K P + E+ Sbjct 208 TFLMSATLND-DIQALKQKFCRSPAILKFNDEE 239 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPV 60 F + + QA++ + + PT IQ+ +IPL L D++ A TGSGKT A+ IPV Sbjct 17 TTFEAFHLDSRLLQAIKNIGFQYPTLIQSHAIPLALQQKRDIIAKAATGSGKTLAYLIPV 76 Query 61 IQIVYETLKDQQEGKKGKT 79 I+ + E K G++ T Sbjct 77 IETILEYKKTIDNGEENGT 95 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 0/50 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +RG+D V V+N LP ++YVHR+GR R + G AIS V KE Sbjct 383 VSRGVDFKNVACVLNFDLPTTAKSYVHRVGRTARGGKTGTAISFVVPLKE 432 >sp|A7A1G0|DBP9_YEAS7 ATP-dependent RNA helicase DBP9 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP9 PE=3 SV=1 Length=594 Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/153 (32%), Positives = 87/153 (57%), Gaps = 8/153 (5%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +I+ P+RELA+Q N +++ Y + +R L I ++ ++L + +I+V Sbjct 93 NGTLGIILVPTRELAQQVYNVLEKLVLYC-SKDIRTLNISSDMSDSVLSTLLMDQPEIIV 151 Query 345 GTPGRLDDLVST--GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 GTPG+L DL+ T ++L++++FLV+DE D +L+ GY D +N++ +P K LQ Sbjct 152 GTPGKLLDLLQTKINSISLNELKFLVVDEVDLVLTFGYQDDLNKIGEYLPL----KKNLQ 207 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 + SATL+ D++ L +K P + E+ Sbjct 208 TFLMSATLND-DIQALKQKFCRSPAILKFNDEE 239 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPV 60 F + + QA++ + + PT IQ+ +IPL L D++ A TGSGKT A+ IPV Sbjct 17 TTFEAFHLDSRLLQAIKNIGFQYPTLIQSHAIPLALQQKRDIIAKAATGSGKTLAYLIPV 76 Query 61 IQIVYETLKDQQEGKKGKT 79 I+ + E K G++ T Sbjct 77 IETILEYKKTIDNGEENGT 95 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 0/50 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +RG+D V V+N LP ++YVHR+GR R + G AIS V KE Sbjct 383 VSRGVDFKNVACVLNFDLPTTAKSYVHRVGRTARGGKTGTAISFVVPLKE 432 >sp|A2YV85|RH29_ORYSI DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_028228 PE=2 SV=2 Length=851 Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/124 (40%), Positives = 71/124 (57%), Gaps = 10/124 (8%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+R+LA QTL +Q K+ D L+ LI+GG + Q L DI++ TP Sbjct 121 RALILSPTRDLATQTLKFAQQLGKFTD---LKISLIVGGDSMESQFEELAENPDIIIATP 177 Query 348 GRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GRL L LNL V ++V DEAD L S G I ++H+ + ++ SD + Q ++ Sbjct 178 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLG---LIQQLHDILHKL-SDTR--QTLLF 231 Query 407 SATL 410 SATL Sbjct 232 SATL 235 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/116 (34%), Positives = 57/116 (49%), Gaps = 9/116 (8%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +Q IIF TK + L F ++G P +G R ++ +F+ Sbjct 293 EQTIIFVSTKHHVEFLNILFREEGLEPS---------LSYGAMDQEARNIHISKFRARKT 343 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 LI TDVAARG+DI + V+N P + + +VHR+GRV R R G A + V +E Sbjct 344 MILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSE 399 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/59 (46%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ E+ + V + +PT IQ +++PLIL G D+ A TGSGKT AF +P+IQ Sbjct 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQ 109 >sp|Q4X1X0|MRH4_ASPFU ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=mrh4 PE=3 SV=1 Length=631 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 92/369 (25%), Positives = 150/369 (41%), Gaps = 55/369 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVV 344 P+A+I+ P+ EL Q +K + K R +I R + L +G+DI+V Sbjct 271 PRAIILVPTSELVAQVGVKVKALSHTV---KYRSGMISSNFTPRRIKNTLFHPDGIDILV 327 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD LL + ++ + I + ++L I Sbjct 328 ATPHLLASIAKTEPYVLSRVSHLVLDEADSLLDRSFAPTTTEI---ISKAAPSLRKL--I 382 Query 405 VCSATLHSF----------DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 +CSAT+ D+K+L+ +H ++P V VV + R Sbjct 383 LCSATIPRSLDNLLRKRYPDIKRLTTPNLH-----------AIPRRVQLGVVDIEKDPYR 431 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L + + A D G + + + KIL V + + D+ F R Sbjct 432 GNRSLACADVIWSIGKAGDAESEGPYASYVAPKTKKIL-----VFVNEREEADEVAQFLR 486 Query 515 TK-IDCDNL---------EQYFIQQGGGPDKKGHQFSCVCLHGDR--------KPHERKQ 556 +K ID +L E+ + P + R P + Q Sbjct 487 SKGIDAQSLSRDSDARKQEEILAEFTEAPPPPSPDEILLAQKKRRYEDAIPFEMPEKANQ 546 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 R + + + L+ TD+A+RGID V VI +P +++HR+GR+GR + G + Sbjct 547 GSSR-RLANTKVLVTTDLASRGIDTLAVKTVILYHVPHTTIDFIHRLGRLGRMGKRGRGV 605 Query 617 SLVATEKEK 625 LV + K Sbjct 606 VLVGKKDRK 614 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 41/86 (48%), Gaps = 22/86 (26%) Query 1 MAAFSEMGVMPEI-----AQAVEEMDWLLPTDIQAESIPLILGGGDV------------- 42 + +F + ++P + +QA+ + + PT IQ +IP +L Sbjct 140 ITSFDQFQLLPVVRNSISSQALPGLVDVTPTPIQRLAIPRLLEEPKTEKKPTKADDDEPR 199 Query 43 ----LMAAETGSGKTGAFSIPVIQIV 64 L+AAETGSGKT A+ +PV+ V Sbjct 200 YDQYLLAAETGSGKTLAYLLPVVDAV 225 >sp|A7E436|DBP8_SCLS1 ATP-dependent RNA helicase dbp8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp8 PE=3 SV=1 Length=540 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 9/110 (8%) Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +IFC D L + + LH +R NL RF+ R L Sbjct 370 VIFCNRTATADYLTHLL---------RLLEHRVTALHSKLPQRQRIDNLGRFRASAARIL 420 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + TDVAARG+DI V VIN +P + +Y+HR+GR RA R G A++ V Sbjct 421 VATDVAARGLDIPEVGLVINYDVPRDPDDYIHRVGRTARAGRKGEAVTFV 470 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/95 (41%), Positives = 53/95 (56%), Gaps = 7/95 (7%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q +QFK L+ +LI GG R Q + L +V+ TPG Sbjct 182 ALVLTPTRELALQIY---EQFKAISSPQSLKAVLITGGSDMRPQATALAQRPHVVIATPG 238 Query 349 RLDDLVSTGKLN----LSQVRFLVLDEADGLLSQG 379 RL D + T + L +VR +VLDEAD LL+ G Sbjct 239 RLADHIRTSGEDTVCALRRVRMVVLDEADRLLASG 273 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AF++P++Q Sbjct 113 FAALDVKPWLVASLGAMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPILQ 171 >sp|A5DR68|MRH4_PICGU ATP-dependent RNA helicase MRH4, mitochondrial OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=MRH4 PE=3 SV=2 Length=573 Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 93/389 (24%), Positives = 161/389 (41%), Gaps = 92/389 (24%) Query 288 KALIVEPSRELAEQTLNNIK---------------------QFKKYIDNP-KLREL-LII 324 +AL+V P+ EL +Q N ++ ++ +++ P +L L L I Sbjct 213 RALVVLPTHELVDQVYNTLRSANDQKFATDEVVDPKLLSDAKYARFLKAPDQLNGLHLNI 272 Query 325 GGVAARDQLSVLENG----VDIVVGTPGRLDDLVSTGKLN-----LSQVRFLVLDEADGL 375 A D VL +G VD++V TPG++ L ++ + V++ V+DEAD L Sbjct 273 KKFGAGDSHRVLFDGIKQRVDVLVTTPGKIQGLAKLQNVDRPFRFFNHVQYCVVDEADTL 332 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQ----VIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 + + D T+ +RL ++ CSAT+ + LS+ FP D Sbjct 333 MDNSWVD----------DTTAVLRRLTKCKDLVFCSATIPKQFNRTLSK---MFP---DE 376 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 K ++ H+ P K R + ++ D SP S+ + Sbjct 377 K-------SIIHINTPALHKIPR------QIVVKIIDAQV---------SPYNGSKTRCL 414 Query 492 LKGEYAVR--AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 + YA+ + + + ++F K D L +++ G + V + GD Sbjct 415 AQALYAIHNDGTEAGYVKRILVFVNEKKDVAPLVDVLVKKYGNRAE-----DIVGITGDT 469 Query 550 KPHERKQNLERFKK-----------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 KP ERK LE F K ++ L+ TD+ ARG++ G+ VI + LP+ + Sbjct 470 KPEERKGLLEPFLKPAELVEDDIDQSKIKVLVTTDLMARGMNFVGIKNVILMDLPNTSVD 529 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVW 627 +HR+GR GR + G ++ + K W Sbjct 530 LMHRVGRTGRMRQSGRVFVIIDKKTGKSW 558 >sp|A3BT52|RH29_ORYSJ DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0416100 PE=2 SV=2 Length=851 Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/124 (40%), Positives = 71/124 (57%), Gaps = 10/124 (8%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+R+LA QTL +Q K+ D L+ LI+GG + Q L DI++ TP Sbjct 121 RALILSPTRDLATQTLKFAQQLGKFTD---LKISLIVGGDSMESQFEELAENPDIIIATP 177 Query 348 GRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GRL L LNL V ++V DEAD L S G I ++H+ + ++ SD + Q ++ Sbjct 178 GRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLG---LIQQLHDILHKL-SDTR--QTLLF 231 Query 407 SATL 410 SATL Sbjct 232 SATL 235 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 39/116 (34%), Positives = 57/116 (49%), Gaps = 9/116 (8%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +Q IIF TK + L F ++G P +G R ++ +F+ Sbjct 293 EQTIIFVSTKHHVEFLNILFREEGLEPS---------LSYGAMDQEARNIHISKFRARKT 343 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 LI TDVAARG+DI + V+N P + + +VHR+GRV R R G A + V +E Sbjct 344 MILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSE 399 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 27/59 (46%), Positives = 38/59 (64%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ E+ + V + +PT IQ +++PLIL G D+ A TGSGKT AF +P+IQ Sbjct 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQ 109 >sp|Q9PA24|RHLB_XYLFA ATP-dependent RNA helicase RhlB OS=Xylella fastidiosa (strain 9a5c) OX=160492 GN=rhlB PE=3 SV=2 Length=543 Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 42/111 (38%), Positives = 61/111 (55%), Gaps = 9/111 (8%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 + ++F TK+ + + + D+ G++ L GD +R+ L RF+KG + Sbjct 259 RTMVFVNTKVFVEGVARAL-------DEAGYRVGV--LSGDVPQRKRETLLNRFQKGQLE 309 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 L+ TDVAARG+ I GV YV N LP + ++YVHRIGR R G AIS Sbjct 310 ILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISF 360 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 53/144 (37%), Positives = 77/144 (53%), Gaps = 9/144 (6%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P P+ALI+ P+RELA Q N+ +F N LR LI GGV Q +L G D+V Sbjct 82 PEDPRALILAPTRELAIQIYNDAVKFG---GNLGLRFALIYGGVDYDKQREMLRKGADVV 138 Query 344 VGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D + + ++L VLDEAD + G+ I + ++P+ S Q Sbjct 139 IATPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFIKDIRFILRRLPERCSR----Q 194 Query 403 VIVCSATLHSFDVKKLSEKIMHFP 426 ++ SATL S V +L+ + M+ P Sbjct 195 TLLFSATL-SHRVLELAYEYMNEP 217 Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust. Identities = 21/59 (36%), Positives = 34/59 (58%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + + P + + + L T IQA ++P+ L G D+ A+TG+GKT AF + V+ Sbjct 11 FSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVN 69 >sp|Q8N8A6|DDX51_HUMAN ATP-dependent RNA helicase DDX51 OS=Homo sapiens OX=9606 GN=DDX51 PE=1 SV=3 Length=666 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 41/130 (32%), Positives = 68/130 (52%), Gaps = 14/130 (11%) Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 P +R+ L++F++G ++ LI TD ARGID+ GV V+N P + YVHR+GR RA Sbjct 541 PGQRRMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAG 600 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM--QLLSEIEEHLNC 668 + G A +L+ +E+ + + L E G + +E+ +LL + Sbjct 601 KTGQAFTLLLKVQERRFLRM------------LTEAGAPELQRHELSSKLLQPLVPRYEE 648 Query 669 TISQVEPDIK 678 +SQ+E +K Sbjct 649 ALSQLEESVK 658 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/109 (37%), Positives = 63/109 (58%), Gaps = 12/109 (11%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA-ARDQLSVLENGVD----- 341 +AL+V P++ELA+Q K F Y D LR L+ G + A++Q S+++ D Sbjct 283 RALVVLPTKELAQQV---SKVFNIYTDATPLRVSLVTGQKSLAKEQESLVQKTADGYRCL 339 Query 342 --IVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 IVV TPGRL D + T +L Q+RFL++DEAD ++ + ++ R+ Sbjct 340 ADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRV 388 >sp|A5DEZ5|MS116_PICGU ATP-dependent RNA helicase MSS116, mitochondrial OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=MSS116 PE=3 SV=2 Length=714 Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 87/364 (24%), Positives = 147/364 (40%), Gaps = 54/364 (15%) Query 288 KALIVEPSRELA---EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 +AL+V P+R+LA E + Q + + K ++IGG ++ L IV+ Sbjct 150 QALVVAPTRDLALQIEAEFKKVLQHQTRNVHRKTDTFVLIGG--RKNDLHPKAKAA-IVI 206 Query 345 GTPGRLDDLVSTGKL--NLSQVRFLVLDEADGLLSQGYSDFIN----RMHNQIPQVTSDG 398 TPGRL+ ++ ++ S +++ V DEAD LL QG++ + R+ + + Sbjct 207 ATPGRLEAILRDPRMLPMFSDLKYRVYDEADRLLDQGFAPTLEVIEERLRDAKAEALEPD 266 Query 399 KRLQVIVCSATLHSFDVKKLSEKI---MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + + SAT+ E I + VD E+S + +H +V D Sbjct 267 NHFKTALFSATVDDAVTNFAHETIGKEYEYINCVDKDAEES-HENIHQGIVRTQSIKDSF 325 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI----KILKGEYAVRAIKEHKMDQAII 511 S+I H D + +AI I EY R ++ K ++ Sbjct 326 EASF--SYILN---HINDK----------YFKAIVFLPTITGTEYYYRVLQRAKREE--- 367 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 K G + + LHG R + ++ F++ L+C Sbjct 368 --------------LYDSETATKKYGSR--ILRLHGKMSQSARDRTVKEFRRTSHGVLVC 411 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 TDVAARG+D + V +VI + +Y+H+IGR RA G A ++ + K + Sbjct 412 TDVAARGLDFNDVSHVIQMCPSSSVADYIHKIGRTARAGARGKARIFISEPEMKFIETLQ 471 Query 632 SSRG 635 RG Sbjct 472 RERG 475 Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 32/51 (63%), Gaps = 1/51 (2%) Query 26 TDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGK 75 T +Q +I P++ V++ A+TG+GKT AF++P IQ E + Q+G+ Sbjct 98 TVVQQRAIMPMMDTKTGVVVRAKTGTGKTLAFALPCIQAALENPQQTQKGR 148 >sp|A1CSR1|MRH4_ASPCL ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=mrh4 PE=3 SV=2 Length=632 Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 92/372 (25%), Positives = 154/372 (41%), Gaps = 60/372 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVV 344 P+A+I+ P+ EL Q +K + K R +I + R + L +G+DI+V Sbjct 271 PRAIILVPTSELVAQVGVKVKALSHTV---KYRSGMISSNLTPRRIKNTLFHPDGIDILV 327 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ-V 403 TP L + T LS+V LVLDEAD LL + ++ + +++ LQ + Sbjct 328 ATPHLLASIAKTEPYLLSRVSHLVLDEADSLLDRSFAPTTTEIISKV------APSLQKL 381 Query 404 IVCSATLHSF----------DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 I+CSAT+ D+K+L+ +H ++P V VV + Sbjct 382 ILCSATIPRSLDNLLRKRYPDIKRLTTPNLH-----------AIPRRVQLGVVDIEKDPY 430 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 R L + + A D+ G S + + KIL V + + D+ F Sbjct 431 RGNRSLACADVIWSIGKAGDSEVSGPYSSFLEPKTKKIL-----VFVNEREEADEVAQFL 485 Query 514 RTK-IDCDNL---------EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 ++K ID +L E+ + P + L ++ HE E K+ Sbjct 486 QSKGIDAHSLSRDSSARKQEEILAEFTEAPPPPSPD--EIMLAQKQRRHEDPIPFEMPKR 543 Query 564 G----------DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 + + L+ TD+ +RGID V VI +P +++HR+GR+GR + G Sbjct 544 TNSGGSTRRLPNTKVLVTTDLTSRGIDTLAVKTVILYHVPHTTIDFIHRLGRLGRMGKRG 603 Query 614 LAISLVATEKEK 625 + LV + K Sbjct 604 RGVVLVGKKDRK 615 Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 41/86 (48%), Gaps = 22/86 (26%) Query 1 MAAFSEMGVMPEI-----AQAVEEMDWLLPTDIQAESIPLILGGG--------------- 40 + +F + ++P + +QA+ + + PT IQ +IP +L Sbjct 140 ITSFDQFPLLPVVRNSIVSQALPGLMEVTPTPIQRLAIPKLLEESKPDKKPVKTDDDEPH 199 Query 41 --DVLMAAETGSGKTGAFSIPVIQIV 64 L+AAETGSGKT A+ +PV+ V Sbjct 200 YDQFLLAAETGSGKTLAYLLPVVDAV 225 >sp|Q2UBZ5|SPB4_ASPOR ATP-dependent rRNA helicase spb4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=spb4 PE=3 SV=1 Length=638 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 97/379 (26%), Positives = 157/379 (41%), Gaps = 83/379 (22%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY------IDNP----------------KLRELLIIGG 326 A+I+ P+RELA Q + + + + NP K+ L++GG Sbjct 90 AIIISPTRELASQIYHVLLSLLAFHPPSASVINPSEDDDVPRQKFPSSTLKVVPQLLLGG 149 Query 327 --VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSD 382 A D L+ +++V TPGRL +L+S+ ++ Q F LVLDEAD LL G+ + Sbjct 150 STTPAEDLSKFLKQSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT--WVDLKGEDSVPDT 440 + + ++P+ G + SA++ S V ++ + P V +KG D Sbjct 210 TLQNIIRRLPKQRRTG------LFSASI-SEAVDQIVRVGLRNPVKVMVKVKGTSGAQD- 261 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 R L +++ T +H D A++ Sbjct 262 ------------KRTPASLQMTYLTTPTIHKFD-----------------------ALKH 286 Query 501 IKEHKMD----QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 I H +D + I F T D L P G F + LHG + R++ Sbjct 287 IL-HSVDPTPQKTIFFASTCSGVDYLSAIL------PLILGDDFQLISLHGKHPANVREK 339 Query 557 NLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 N RF L+ TDVA+RG+DI V V+ + P + + ++HR GR GRA R GL+ Sbjct 340 NFNRFVNSYSPAILLTTDVASRGLDIPSVDLVVQIDPPSDPKTFIHRCGRAGRAGRRGLS 399 Query 616 ISLVATEKEKVWYHVCSSR 634 + L+ +E+ + R Sbjct 400 VVLLHPGREEDYVSFLEVR 418 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 37/59 (63%), Gaps = 4/59 (7%) Query 8 GVMPEIAQ----AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 GV P +++ AV M + T +QA +IPL + DV++ A TGSGKT +F IP+++ Sbjct 16 GVSPSLSEWVLEAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPIVE 74 >sp|Q1E7Y4|MAK5_COCIM ATP-dependent RNA helicase MAK5 OS=Coccidioides immitis (strain RS) OX=246410 GN=MAK5 PE=3 SV=1 Length=783 Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 25/162 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P ALI+ P+RELA Q ++ + N ++R + GG++ Q +L + DI++ T Sbjct 274 PMALILSPTRELAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLLADA-DIIIAT 332 Query 347 PGRLDDLVS--TGKLN-LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV--------- 394 PGRL ++V TG L+ L ++RFLV+DEAD LLS+G+ + + N I +V Sbjct 333 PGRLWEVVGSMTGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGE 392 Query 395 ------------TSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 + Q +V SAT H +KLS KI + Sbjct 393 RSEREPEPEPDEEKKAEPRQTLVFSATFHKGLQQKLSGKIRY 434 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 43/83 (52%), Gaps = 3/83 (4%) Query 544 CLHGDRKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 LH R +++ERF L+ TDVAARG+DI G+ +++ +P YV Sbjct 529 ALHSSMAQKARLRSVERFSSLSSDPSSILVATDVAARGLDIKGIDLIVHYHIPRTADTYV 588 Query 601 HRIGRVGRAERMGLAISLVATEK 623 HR GR RA G +I + A E+ Sbjct 589 HRSGRTARASASGKSILICAPEE 611 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 39/62 (63%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ + + E+ ++ + + PT IQ+ IP +L G DV+ A TGSGKT AF IP+ Sbjct 189 VSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIPAVLQGHDVIGKASTGSGKTLAFGIPI 248 Query 61 IQ 62 ++ Sbjct 249 VE 250 >sp|A4R8G3|DBP8_PYRO7 ATP-dependent RNA helicase DBP8 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP8 PE=3 SV=3 Length=579 Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 46/78 (59%), Gaps = 0/78 (0%) Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 LH + +R NL RF+ R L+ TDVA+RG+DI V V+N LP + +Y+H Sbjct 430 VTSLHSKLRQQQRIDNLGRFRASAARILVATDVASRGLDIPEVSVVVNYDLPRDPDDYIH 489 Query 602 RIGRVGRAERMGLAISLV 619 R+GR RA R G A++ V Sbjct 490 RVGRTARAGRKGEAVNFV 507 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/98 (44%), Positives = 56/98 (57%), Gaps = 7/98 (7%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+A A+++ +RELA L +QFK L+ LIIGG R Q L IV Sbjct 214 PSAIFAVVLTATRELA---LQIYEQFKAVSSPHVLKAALIIGGSDMRSQAIALAQRPSIV 270 Query 344 VGTPGRL-DDLVSTGK---LNLSQVRFLVLDEADGLLS 377 + TPGRL D + S+G+ L +V+FLVLDEAD LLS Sbjct 271 IATPGRLADHIRSSGEDTICGLRRVKFLVLDEADRLLS 308 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 35/59 (59%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +GV P + Q++ + PT IQ I IL G D + + TGSGKT AF++P++Q Sbjct 150 FESLGVEPWLVQSLANLAVKRPTGIQKGCIGEILKGRDCIGGSRTGSGKTIAFAVPILQ 208 >sp|Q2UQW3|ROK1_ASPOR ATP-dependent RNA helicase rok1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rok1 PE=3 SV=1 Length=725 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH D +R + ++ F+KG++ L+ TD+ ARGID G+ V+N + Sbjct 517 PPEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGIDFRGINGVVNYDI 576 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 P+ YVHR+GR GRA R G +++ KE + Y Sbjct 577 PNSAAVYVHRVGRTGRAGREG-GVAVTYYTKEDIPY 611 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 13/74 (18%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGG-------------GDVLMAAETGSGKTGAFSIP 59 +A+ + E + +PT++Q ++PL+LG D+L+ A TGSGKT +F IP Sbjct 190 LAENITEQGFTVPTEVQLGTLPLLLGDRTIGQSKTEEPVEPDLLVVAPTGSGKTLSFLIP 249 Query 60 VIQIVYETLKDQQE 73 VI + QQE Sbjct 250 VINKIVRHHHGQQE 263 >sp|Q6CEB8|DRS1_YARLI ATP-dependent RNA helicase DRS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DRS1 PE=3 SV=1 Length=753 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 15/127 (12%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +R Q++ FKK +V L+CTD+A+RG+DI + V+N +P Y+HR+G Sbjct 528 LHGALSQEQRLQSITAFKKLEVPILVCTDLASRGLDIPKIECVVNYDMPQTHAVYLHRVG 587 Query 605 RVGRAERMGLAISLV-------ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 R RA R G +I+LV A +E + S +GK G W + Sbjct 588 RTARAGREGRSITLVGEAAADRAIVREAIKSVSESKQGKAV--------GRNVDWPEVEK 639 Query 658 LLSEIEE 664 L S+IEE Sbjct 640 LYSKIEE 646 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/127 (30%), Positives = 71/127 (56%), Gaps = 9/127 (7%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A K +++ P+REL+ Q + K+ +Y+ +R L +GG+ R Q L+ ++V+ Sbjct 323 ATKVVVLTPTRELSIQVADVGKKLAQYVSG--VRFGLAVGGLNLRVQEQELKTRPEVVIA 380 Query 346 TPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR +D + ++ N+ V LV+DEAD +L +G+ + + +P K+ Q + Sbjct 381 TPGRFIDHVRNSPSFNVDDVEILVIDEADRMLEEGFQQELTEILTLLP------KKRQTL 434 Query 405 VCSATLH 411 + SAT++ Sbjct 435 LFSATMN 441 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 42/67 (63%), Gaps = 1/67 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ- 62 F + + + + + + + PT IQ+ +IP+ L G D++ A TGSGKT A+ IPV++ Sbjct 254 FQTLNLSRPVMKGISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLER 313 Query 63 IVYETLK 69 ++Y++ K Sbjct 314 LLYKSSK 320 >sp|Q75F95|DRS1_EREGS ATP-dependent RNA helicase DRS1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DRS1 PE=3 SV=1 Length=734 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 0/75 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +R Q++ FK DV L+CTD+A+RG+DI + VIN +P + Y+HR+G Sbjct 497 LHGSLTQEQRLQSVNNFKSLDVPVLVCTDLASRGLDIPKIEVVINYDMPKTYEIYLHRVG 556 Query 605 RVGRAERMGLAISLV 619 R RA R G +++LV Sbjct 557 RTARAGREGKSVTLV 571 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 72/128 (56%), Gaps = 9/128 (7%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + + L++ P+RELA Q + K+ K++ L L +GG+ R Q L+ DIV+ Sbjct 290 STRVLVLTPTRELAIQVADVGKKLGKFVSG--LTFGLAVGGLNLRQQEQALKLRPDIVIA 347 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR+ D + ++ ++ V LV+DEAD +L G+ D +N + + IP + Q + Sbjct 348 TPGRIIDHIRNSASFSVDSVEVLVIDEADRMLEDGFQDELNEIMSLIPS------KRQTL 401 Query 405 VCSATLHS 412 + SAT++S Sbjct 402 LFSATMNS 409 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/69 (35%), Positives = 42/69 (61%), Gaps = 1/69 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+ + + + + + + + P+ IQ +IP+ L G DV+ A TGSGKT AF IP+I Sbjct 219 STFNSLSLSRPVLKGLAALGYTKPSPIQGATIPIALLGKDVIAGAVTGSGKTAAFMIPII 278 Query 62 Q-IVYETLK 69 + ++Y+ K Sbjct 279 ERLLYKPAK 287 >sp|A1CNK1|ROK1_ASPCL ATP-dependent RNA helicase rok1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=rok1 PE=3 SV=1 Length=738 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH D +R + ++ F+KG++ L+ TD+ ARG+D G+ V+N + Sbjct 530 PTEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYDI 589 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 P+ YVHR+GR GRA R G I++ KE + Y Sbjct 590 PNSAAVYVHRVGRTGRAGREG-GIAVTYYTKEDIPY 624 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 11/84 (13%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQA----------ESIPLILGGGDVLMAAETGSGKTG 54 S+ + +A+ + E + +PT++Q ES D+L+ A TGSGKT Sbjct 193 SKYKISSRLAENIAEQGFTVPTEVQLGTLPLLLGGFESKAGESVEPDLLVVAPTGSGKTL 252 Query 55 AFSIPVIQIVYETLKDQ-QEGKKG 77 +F IPVI + DQ QE ++G Sbjct 253 SFLIPVINKIVRHHHDQSQEQERG 276 >sp|P0CQ91|MAK5_CRYNB ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=MAK5 PE=3 SV=1 Length=772 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 0/89 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LH + +R +NL+RFK LI TDVAARG+DI V +V++ LP Y+HR G Sbjct 514 LHSHLQQKQRLKNLDRFKSNPKGILIATDVAARGLDIPQVDHVVHFNLPRTADAYIHRSG 573 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSS 633 R RA+ G A+ LV+ +++ V + S Sbjct 574 RTARAQNEGFALQLVSPDEKSVQRALMKS 602 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 13/105 (12%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYI----------DNPKLRELLIIGGVAARDQLSVLEN 338 AL++ P+RELA Q ++++ K+ P++ ++GG++A+ Q +LE Sbjct 250 ALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQKRILER 309 Query 339 GVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGY 380 G D++V TPGRL DL+ ++ +RFLV+DEAD ++ G+ Sbjct 310 GCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGH 354 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S + + P + ++ + PT IQ+ +IP + G DV+ AETGSGKT A+S+P+ Sbjct 171 LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPI 230 Query 61 I 61 + Sbjct 231 L 231 >sp|P0CQ90|MAK5_CRYNJ ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=MAK5 PE=3 SV=1 Length=772 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 0/89 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LH + +R +NL+RFK LI TDVAARG+DI V +V++ LP Y+HR G Sbjct 514 LHSHLQQKQRLKNLDRFKSNPKGILIATDVAARGLDIPQVDHVVHFNLPRTADAYIHRSG 573 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSS 633 R RA+ G A+ LV+ +++ V + S Sbjct 574 RTARAQNEGFALQLVSPDEKSVQRALMKS 602 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 13/105 (12%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYI----------DNPKLRELLIIGGVAARDQLSVLEN 338 AL++ P+RELA Q ++++ K+ P++ ++GG++A+ Q +LE Sbjct 250 ALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQKRILER 309 Query 339 GVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGY 380 G D++V TPGRL DL+ ++ +RFLV+DEAD ++ G+ Sbjct 310 GCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGH 354 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S + + P + ++ + PT IQ+ +IP + G DV+ AETGSGKT A+S+P+ Sbjct 171 LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPI 230 Query 61 I 61 + Sbjct 231 L 231 >sp|O80792|RH33_ARATH Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 GN=RH33 PE=3 SV=1 Length=845 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 84/339 (25%), Positives = 148/339 (44%), Gaps = 63/339 (19%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR-DQLSVLENGVDIVVGTPG 348 LI+ P+RELA Q K K D ++ L IGG R DQ + I++ TPG Sbjct 456 LILCPTRELASQIAAEGKALLKNHDGIGVQTL--IGGTRFRLDQQRLESEPCQILIATPG 513 Query 349 RLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 RL D + L ++ ++DEAD LL G+ + ++ + +P ++ Q ++ Sbjct 514 RLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFKRDVEKIIDCLP------RQRQSLL 567 Query 406 CSATLHSFDVKKLSEKIMHFP-TWVDLKGEDSVP--DTV-HHVVVPVNPKTDRLWERLGK 461 SAT+ +V+++S+ ++ +++D G V D V +V + L L K Sbjct 568 FSATIPK-EVRRVSQLVLKRDHSYIDTIGLGCVETHDKVKQSCIVAPHESHFHLVPHLLK 626 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 HI N P +Y + I+FC T + + Sbjct 627 EHI---------NNMP-----------------DYKI-----------IVFCSTGM-VTS 648 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L +++ + + +H + R + FK+ + L+ +DV+ARG++ Sbjct 649 LMYTLLRE--------MKLNVREIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNY 700 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 V VI V +P +++ Y+HR+GR GR + G + L+A Sbjct 701 PDVTLVIQVGIPSDREQYIHRLGRTGREGKGGKGLLLIA 739 Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust. Identities = 20/65 (31%), Positives = 35/65 (54%), Gaps = 0/65 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E + P +A+ + T +Q ++ L G D L+ A+TG+GK+ AF +P I+ Sbjct 377 FDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 436 Query 64 VYETL 68 V + + Sbjct 437 VLKAM 441 >sp|A1D1E3|ROK1_NEOFI ATP-dependent RNA helicase rok1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rok1 PE=3 SV=1 Length=738 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH D +R + ++ F+KG++ L+ TD+ ARG+D G+ V+N + Sbjct 531 PAEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYDI 590 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 P+ YVHR+GR GRA R G I++ KE + Y Sbjct 591 PNSAAVYVHRVGRTGRAGREG-GIAVTYYTKEDIPY 625 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/91 (30%), Positives = 47/91 (52%), Gaps = 18/91 (20%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--------------GDV 42 + +F E+ + +A+ + E + +PT++Q ++PL+L G D+ Sbjct 186 LVSFKELRTRYKISRRLAENIAEQGFSVPTEVQLGTLPLLLEGFKVSGNSKDAESIEPDL 245 Query 43 LMAAETGSGKTGAFSIPVIQIVYETLKDQQE 73 L+ A TGSGKT +F IPVI + +Q+E Sbjct 246 LVVAPTGSGKTLSFLIPVINKIVRHHHEQEE 276 >sp|Q4WRH5|ROK1_ASPFU ATP-dependent RNA helicase rok1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=rok1 PE=3 SV=1 Length=739 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH D +R + ++ F+KG++ L+ TD+ ARG+D G+ V+N + Sbjct 532 PAEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYDI 591 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 P+ YVHR+GR GRA R G I++ KE + Y Sbjct 592 PNSAAVYVHRVGRTGRAGREG-GIAVTYYTKEDIPY 626 >sp|Q54TD7|DDX24_DICDI ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum OX=44689 GN=ddx24 PE=3 SV=1 Length=940 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 56/92 (61%), Gaps = 0/92 (0%) Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 LH + +R +NL+RF+ D LI TDVAARG+DI V +VI+ +P Q Y+H Sbjct 690 VFALHAQMQQKQRLKNLDRFRTLDNVVLIATDVAARGLDIPLVQHVIHYQVPRTTQLYIH 749 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 R GR R+++ G+++ LV ++ ++ + SS Sbjct 750 RSGRTARSDQDGISVVLVTPKERPLYIKLDSS 781 Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/95 (39%), Positives = 61/95 (64%), Gaps = 6/95 (6%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 +L++ P+RELA Q N+IK I + L+ + I+GG+A++ Q VL +IVV TPG Sbjct 407 SLVICPTRELAIQVTNHIKSI---ISHTNLKVISIVGGMASQRQQRVLSKRPEIVVATPG 463 Query 349 RLDDLVSTGKLNLSQVRFLV---LDEADGLLSQGY 380 RL +L++ G +L ++ L+ +DEAD ++ QG+ Sbjct 464 RLWELITEGHQHLVELESLLCLGIDEADRMVEQGH 498 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIP 59 M+ ++ + P I + + + + PT+IQ+ IP+ + G DV+ AA+TGSGKT AF IP Sbjct 293 MSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIGAAQTGSGKTLAFGIP 352 Query 60 VIQIVYETLK 69 ++Q + + L+ Sbjct 353 MVQRILQHLR 362 >sp|A2QAB5|ROK1_ASPNC ATP-dependent RNA helicase rok1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=rok1 PE=3 SV=2 Length=729 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 1/96 (1%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH + +R + +++F+KG++ L+ TD+ ARG+D G+ V+N + Sbjct 524 PPEAGGSSRIAVLHSELSDGQRSEIMKQFRKGEIWILVTTDLLARGVDFRGINGVVNYDI 583 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 P+ YVHR+GR GRA R G I++ KE + Y Sbjct 584 PNSAAVYVHRVGRTGRAGREG-GIAVTYYTKEDIPY 618 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 14/66 (21%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGG--------------DVLMAAETGSGKTGAFSI 58 +A+ + E + +PT++Q S+PL+LG D+L+ A TGSGKT +F I Sbjct 194 LAENIAEQGFTVPTEVQLGSLPLLLGDQSVPQKSGTEKSTEPDLLVVAPTGSGKTLSFMI 253 Query 59 PVIQIV 64 PVI + Sbjct 254 PVINKI 259 >sp|P53166|MRH4_YEAST ATP-dependent RNA helicase MRH4, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRH4 PE=1 SV=1 Length=561 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/365 (23%), Positives = 152/365 (42%), Gaps = 46/365 (13%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +++I+ P+ EL +Q + + K + L + RD L ++N +DI+V TP Sbjct 203 RSIILVPTHELVDQVYETVSKTKTLLG---LNSFKWDKATSYRDLLENIKNRIDILVTTP 259 Query 348 GRLDDLVSTGKLN-----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 G+L +L S + LS+V F+VLDEAD LL + + + + +IP + Sbjct 260 GKLLNLFSIRMITRPDKVLSKVGFVVLDEADTLLDRSWLEETHSAIKRIPNIN------H 313 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLG 460 +I CSAT+ + K +++ FPT V + +P + V +N Sbjct 314 LIFCSATIPQ-EFNKTMQRL--FPTVVPIMTPRLHKLPFALDFKV--INSALSPFKGSKI 368 Query 461 KSHIRTDDVHAKDNTRPG--------ANSPEMWSEAIKILKGEYAVRAIK-------EHK 505 K+ +T + D+T PG N + E + +L ++ AI E + Sbjct 369 KALAQTLYAISNDDTEPGFEKRCIIFVNEKKNVPEIVNLLNKKFGHNAIGLTGEDTFEER 428 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV---CLHGDRKPHERKQNLERFK 562 ++ + F + + Q P +F + G K N Sbjct 429 SEKIMPFLSPPRPLSEV----VAQSTSPPTSLKKFEIPDSNIVIGKLK--NTNSNGTAPS 482 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + L+ TD+ ARG++ GV V+ +P + +HR+GR R ++ G + ++ Sbjct 483 NKSLHVLVTTDLMARGLNFKGVRNVVLYDVPKTSIDLIHRVGRTARMKQGG-RVFMLTDS 541 Query 623 KEKVW 627 K K W Sbjct 542 KTKSW 546 >sp|A6ZUB2|MRH4_YEAS7 ATP-dependent RNA helicase MRH4, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=MRH4 PE=3 SV=1 Length=561 Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 85/365 (23%), Positives = 152/365 (42%), Gaps = 46/365 (13%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +++I+ P+ EL +Q + + K + L + RD L ++N +DI+V TP Sbjct 203 RSIILVPTHELVDQVYETVSKTKTLLG---LNSFKWDKATSYRDLLENIKNRIDILVTTP 259 Query 348 GRLDDLVSTGKLN-----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 G+L +L S + LS+V F+VLDEAD LL + + + + +IP + Sbjct 260 GKLLNLFSIRMITRPDKVLSKVGFVVLDEADTLLDRSWLEETHSAIKRIPNIN------H 313 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLG 460 +I CSAT+ + K +++ FPT V + +P + V +N Sbjct 314 LIFCSATIPQ-EFNKTMQRL--FPTVVPIMTPRLHKLPFALDFKV--INSALSPFKGSKI 368 Query 461 KSHIRTDDVHAKDNTRPG--------ANSPEMWSEAIKILKGEYAVRAIK-------EHK 505 K+ +T + D+T PG N + E + +L ++ AI E + Sbjct 369 KALAQTLYAISNDDTEPGFEKRCIIFVNEKKNVPEIVNLLNKKFGHNAIGLTGEDTFEER 428 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV---CLHGDRKPHERKQNLERFK 562 ++ + F + + Q P +F + G K N Sbjct 429 SEKIMPFLSPPRPLSEV----VAQSTSPPTSLKKFEIPDSNIVIGKLK--NTNSNGTAPS 482 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + L+ TD+ ARG++ GV V+ +P + +HR+GR R ++ G + ++ Sbjct 483 NKSLHVLVTTDLMARGLNFKGVRNVVLYDVPKTSIDLIHRVGRTARMKQGG-RVFMLTDS 541 Query 623 KEKVW 627 K K W Sbjct 542 KTKSW 546 >sp|Q0CQF3|SPB4_ASPTN ATP-dependent rRNA helicase spb4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=spb4 PE=3 SV=1 Length=639 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 94/375 (25%), Positives = 153/375 (41%), Gaps = 75/375 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY-------IDNP---------------KLRELLIIGG 326 A+I+ P+RELA Q + + I P K+ L++GG Sbjct 90 AIIISPTRELASQIHQVLLSLLAFHPPSAAAIKPPGEDDAPREKFSASTLKVVPQLLLGG 149 Query 327 --VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSD 382 A D L++ ++++ TPGRL +L+S+ ++ Q F LVLDEAD LL G+ + Sbjct 150 STTPAEDLSYFLKHSPNVLISTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT--WVDLKGEDSVPDT 440 + + ++P+ G + SA++ S V ++ + P V +KG V D Sbjct 210 TLQNILRRLPKQRRTG------LFSASI-SEAVDQIVRVGLRNPVKVLVKVKGTSGVQD- 261 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 R L +++ T H RP S + + Sbjct 262 ------------KRTPASLQMTYLTTPPAHKFLTLRPILTSLQPTPQ------------- 296 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + I F T D L P G F + LHG + R++N R Sbjct 297 -------KTIFFVSTCSGVDYLAAIL------PLLLGDDFQLIPLHGKHPANVRQKNFNR 343 Query 561 FKKGDV-RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 F L+ TDVA+RG+DI V V+ + P + + ++HR GR GRA R G+++ L+ Sbjct 344 FINAHTPSILLTTDVASRGLDIPSVDLVVQIDPPSDPKTFIHRCGRAGRAGRRGVSVVLL 403 Query 620 ATEKEKVWYHVCSSR 634 +E+ + R Sbjct 404 HPGREEDYVSFLEVR 418 Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust. Identities = 18/37 (49%), Positives = 27/37 (73%), Gaps = 0/37 (0%) Query 26 TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 T +QA +IPL + DV++ A TGSGKT +F +PV++ Sbjct 38 TPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLVPVVE 74 >sp|P0C2N7|DRS1_CHAGB ATP-dependent RNA helicase DRS1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DRS1 PE=3 SV=1 Length=795 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/126 (34%), Positives = 70/126 (56%), Gaps = 8/126 (6%) Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G V +L+ TD+A+RG+DI G+ VIN P + YVHR+GR RA R G+AI+L A Sbjct 561 FRDGKVNYLLATDLASRGLDIKGIDTVINYEAPQSLEIYVHRVGRTARAGRSGVAITLAA 620 Query 621 TEKEKVW-YHVCSSRGKGC-YNTRLKEDGGCTIWYNEM-QLLSEIEEHLN-----CTISQ 672 KV V + + +G +R+ + W +++ ++ EI+E L ++Q Sbjct 621 EPDRKVVKAAVRAGKAQGAKIISRVIDAADADKWQDQIDEMDDEIDEILQEEKEEKQLAQ 680 Query 673 VEPDIK 678 +E +K Sbjct 681 IEMQVK 686 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 11/164 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + +++ P+RELA Q + + + D ++ L +GG++ + Q L D+V+ TP Sbjct 349 RVVVLTPTRELAIQCHSVATKLASHTD---IKFCLAVGGLSLKVQEGELRLRPDVVIATP 405 Query 348 GR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 GR +D + ++ + V LVLDEAD +L G++D +N + +P K Q ++ Sbjct 406 GRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLP------KSRQTMLF 459 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 SAT+ S V KL ++ P + + + T+ V + P Sbjct 460 SATMTST-VDKLIRVGLNKPARIMVDSQKQTAVTLAQEFVRLRP 502 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/62 (39%), Positives = 40/62 (65%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F M + I + + + + PT IQA++IP+ L G DV+ A TGSGKT AF +P+ Sbjct 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334 Query 61 IQ 62 ++ Sbjct 335 LE 336 >sp|P52271|Y308_MYCGE Probable ATP-dependent RNA helicase MG308 OS=Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37) OX=243273 GN=MG308 PE=3 SV=1 Length=410 Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 73/328 (22%), Positives = 129/328 (39%), Gaps = 78/328 (24%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P+A+I P++EL Q +N + + KKY + +++ QL V Sbjct 64 PQAVIFVPTKELQWQIINILTEIKKY-----FKTFTFATSFSSKAQLIV----------- 107 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG-YSDFINRMHNQIPQVTSDGKRLQVIV 405 L++ L S+VR++V DE D L Q ++ +H + K L Sbjct 108 -----SLLNEKYLFTSKVRYVVFDEIDMFLEQSSIQQWLECVH-----LFQKAKPL-FAF 156 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL + ++ + +++++ ++L + + V H VV H+ Sbjct 157 FSATLFNQQLQIIKKQVINTKV-INLHPKQWIHPLVKHFVV----------------HLN 199 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 T++ + G A+ +K H+ Q I+FC + L Q Sbjct 200 TENRFS----------------------GLLAL--LKHHQNQQIIVFCSNQKSLKQLTQL 235 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + S ++G ERK N + ++ L+ +D+ +RGID++ Sbjct 236 L---------SNNNISFGSIYGSLTYQERKNNFTKATNNKLKLLVVSDLFSRGIDLNYFS 286 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMG 613 VI+ LP Y+HR GRV R G Sbjct 287 VVISWDLPKIDSFYIHRSGRVARLNSWG 314 >sp|Q2UMY7|MAK5_ASPOR ATP-dependent RNA helicase mak5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=mak5 PE=3 SV=1 Length=757 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/117 (36%), Positives = 71/117 (61%), Gaps = 9/117 (8%) Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++S+ +++ T+T P AL++ P+RELA Q +I + + R L+ GG Sbjct 250 LRSKTQKDSEKTET-----TPIALVLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGG 304 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGY 380 ++ + Q VL N DIV+GTPGR+ +++S+G + ++FLV+DEAD LLS+G+ Sbjct 305 LSLQKQQRVLTNA-DIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEADRLLSEGH 360 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 2/82 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PEI + +M + PT +Q IP IL G DV+ A TGSGKT AF IP+ Sbjct 183 VSAWESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGRDVIGKASTGSGKTLAFGIPI 242 Query 61 IQIVYETL--KDQQEGKKGKTT 80 ++ E L K Q++ +K +TT Sbjct 243 LEYYLEKLRSKTQKDSEKTETT 264 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/78 (36%), Positives = 40/78 (51%), Gaps = 3/78 (4%) Query 542 CVCLHGDRKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + LH R +++ERF L+ TDVAARG+DI G+ +V++ P Sbjct 513 ALALHSSMAQKARLRSVERFSSPSSDPSSILVATDVAARGLDIKGIDFVVHYHAPRTADA 572 Query 599 YVHRIGRVGRAERMGLAI 616 YVHR GR RA G ++ Sbjct 573 YVHRSGRTARAGASGKSV 590 >sp|Q5BET6|ROK1_EMENI ATP-dependent RNA helicase rok1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rok1 PE=3 SV=1 Length=742 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 1/96 (1%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH D +R ++ F+KG++ L+ TD+ ARG+D G+ V+N + Sbjct 529 PPEAGGSARIAVLHSDLSDTQRSDIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDI 588 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 P+ YVHR+GR GRA R G +++ KE + Y Sbjct 589 PNSPAVYVHRVGRTGRAGREG-GVAVTYYTKEDIPY 623 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/72 (38%), Positives = 41/72 (57%), Gaps = 15/72 (21%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-----GG----------DVLMAAETG 49 S+ + +A+ + E + +PT++Q S+PL+LG GG D+L+ A TG Sbjct 192 SKYKISRRLAENIAEQGFTVPTEVQLGSLPLLLGNSAVPGGSSDSTSATEPDLLVVAPTG 251 Query 50 SGKTGAFSIPVI 61 SGKT +F IPVI Sbjct 252 SGKTLSFMIPVI 263 >sp|Q7S6F3|DBP9_NEUCR ATP-dependent RNA helicase dbp-9 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-9 PE=3 SV=1 Length=676 Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 49/151 (32%), Positives = 80/151 (53%), Gaps = 6/151 (4%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA+Q I F + ++ + V+ S+L N D++V TP Sbjct 171 ALILVPTRELADQVHKAIDAFSAFC-TKDIQSAKLTDNVSDAVLRSLLANAPDVIVSTPA 229 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 R + +G L+++++++LVLDEAD +LS GY + + + +P+ +Q + SA Sbjct 230 RAWHNIESGALSVAKLQYLVLDEADLVLSYGYDEDMENIARSLPK-----GGVQTTMMSA 284 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 TL S ++ L PT +DLK E S D Sbjct 285 TLVSDELDTLKGFFCRNPTMLDLKEEFSNED 315 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 28/58 (48%), Positives = 41/58 (71%), Gaps = 0/58 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS++G+ P + QAV + + PT +Q ++IPL L G DVL A+TGSGKT A+ +PV+ Sbjct 97 FSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAGQDVLCKAKTGSGKTAAYVLPVL 154 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 29/44 (66%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V VIN +P +Y+HRIGR RA R G+A+S+V Sbjct 449 SRGIDFKNVAAVINFDMPTSSSSYIHRIGRTARAGRAGIALSMV 492 >sp|A2QE29|SPB4_ASPNC ATP-dependent rRNA helicase spb4 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=spb4 PE=3 SV=2 Length=642 Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 7/128 (5%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV- 566 + I+F T D L P G F + LHG + + R++N RF Sbjct 298 KTIMFVSTCSGVDYLSAIL------PSIIGDDFQLIPLHGKHQANVREKNFNRFVNSHTP 351 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 L+ TDVA+RG+DI V VI + P + + ++HR GR GRA R GL++ L+ +E+ Sbjct 352 AILLTTDVASRGLDIPSVDVVIQIDPPSDPKTFIHRCGRAGRAGRKGLSVVLLHPGREED 411 Query 627 WYHVCSSR 634 + R Sbjct 412 YVSFLEVR 419 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 27/137 (20%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY--------------IDNP---------KLRELLIIG 325 A+I+ P+RELA Q N + + D P K+ L++G Sbjct 90 AIIISPTRELASQIYNVLTSLLAFHPPSASTLKPSDDDDDAPRQKFPSSTLKVVPQLLLG 149 Query 326 G--VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYS 381 G A D + L+ +++V TPGRL +L+S+ ++ Q F LV+DEAD LL G+ Sbjct 150 GSTTPAEDLSTFLKRSPNLLVSTPGRLLELLSSPHVHCPQSSFEMLVMDEADRLLDLGFK 209 Query 382 DFINRMHNQIPQVTSDG 398 D + + ++P+ G Sbjct 210 DTLQNILRRLPKQRRTG 226 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 37/59 (63%), Gaps = 4/59 (7%) Query 8 GVMPEIAQ----AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 GV P +++ AV M + T +QA +IPL + DV++ A TGSGKT +F IPV++ Sbjct 16 GVTPALSEWVLDAVASMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVE 74 >sp|Q5ANB2|DBP10_CANAL ATP-dependent RNA helicase DBP10 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP10 PE=3 SV=1 Length=908 Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 10/159 (6%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P +A+I+ PSRELA QT +K+F + L+ +++IGG + + S + DI+ Sbjct 166 PGGVRAVILSPSRELALQTYKQVKEFSHGTN---LQSIVLIGGDSLEEDFSKMMTKPDII 222 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TPGR L + +L V+++V DEAD L G+++ +N + +P Q Sbjct 223 VCTPGRFLHLKVEMQYDLMTVQYIVFDEADRLFEMGFAEQLNELLASLPS------NRQS 276 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 ++ SATL V ++ + P V L E + D + Sbjct 277 LLFSATLPRSLV-DFAKAGLTNPVLVRLDAESKISDQLQ 314 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 1/80 (1%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 ++G H RK L +F+ G L+ TDVAARGIDI + VIN TLP + ++HR+G Sbjct 424 IYGTLDQHARKNQLYQFRVGLTNVLVVTDVAARGIDIPVLANVINFTLPASSKIFIHRVG 483 Query 605 RVGRAERMGLAISLVATEKE 624 R RA G A S+V EKE Sbjct 484 RTARAGNKGWAYSIV-NEKE 502 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/72 (42%), Positives = 43/72 (60%), Gaps = 4/72 (6%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ I + + + PT IQ ++IPLI+ G DV+ A TGSGKT AF +P+I Sbjct 100 SFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLI- 158 Query 63 IVYETLKDQQEG 74 E LK +Q G Sbjct 159 ---ERLKSRQPG 167 >sp|Q54CD6|DDX5_DICDI Probable ATP-dependent RNA helicase ddx5 OS=Dictyostelium discoideum OX=44689 GN=ddx5 PE=3 SV=1 Length=697 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 79/325 (24%), Positives = 139/325 (43%), Gaps = 55/325 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTP 347 L++ P+REL Q +N + ++ +I GG++ Q+ LE I++ TP Sbjct 294 VLVLVPTRELGLQVHSNTLIITQLFG---IKTSVIYGGISKNLQIEQLEKEKPQILISTP 350 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL +++ G ++LS V LVLDEAD +LS+G + ++ QI + Q I+ S Sbjct 351 GRLIEMIENGHVDLSSVTMLVLDEADKMLSKGLIPQLKQIRGQIRPDS------QNILFS 404 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT +K++S+ + P+ G +P +HI+ D Sbjct 405 ATFPD-SLKEVSKDWIKDPSIRLRIGSSELPKL---------------------NHIQQD 442 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 + +P A IK+L + KE K + I+F + + + Sbjct 443 AQLIAHHKKPRA--------LIKLL----SEPQFKEKK--KTIVFFNKIKELKRISIMLL 488 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + D + G+ R++ + +F L+ TD+ RGI I + + Sbjct 489 KSNIKHD---------TIFGNIDQELREKLINKFSSSRSTLLLSTDIIGRGIHIDDIFNI 539 Query 588 INVTLPDEKQNYVHRIGRVGRAERM 612 IN P + Y HR+GR GR++++ Sbjct 540 INYDFPRSLEQYCHRVGRAGRSDKV 564 >sp|Q6NZQ2|DDX31_MOUSE Probable ATP-dependent RNA helicase DDX31 OS=Mus musculus OX=10090 GN=Ddx31 PE=2 SV=2 Length=687 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 44/148 (30%), Positives = 87/148 (59%), Gaps = 7/148 (5%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P AL++ P+RELA Q+ + +++ K + +++GG + + + L G++I++ Sbjct 177 DGPYALVLVPTRELALQSFDTVQKLLKPFT--WIVPGVLMGGEKRKSEKARLRKGINILI 234 Query 345 GTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 TPGRL D + ST L+ +++R+L++DEAD +L G+ I + N V ++ ++ Q Sbjct 235 STPGRLVDHIKSTKNLHFNRIRWLIVDEADRILDLGFEKDITVILN---AVNAECQKRQN 291 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDL 431 ++ SATL + V +L + +H P + + Sbjct 292 VLLSATL-TEGVTRLVDISLHNPVSISV 318 Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/83 (35%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG+ + ER F + L+CTDVA+RG+D+ V +++ + P Y+HRIG Sbjct 422 LHGNMEQEERTSVFHEFSHSETGVLLCTDVASRGLDLPQVTWIVQYSAPSSPAEYIHRIG 481 Query 605 RVGRAERMGLAISLVA-TEKEKV 626 R R G ++ ++A +E E V Sbjct 482 RTARIGCHGSSLLILAPSEAEYV 504 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 39/61 (64%), Gaps = 1/61 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLP-TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 AF E+ + P + + + + T +Q +SIP++L G D L+ ++TGSGKT A+ +PV+ Sbjct 104 AFQELDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCVPVV 163 Query 62 Q 62 Q Sbjct 164 Q 164 >sp|Q0CMB0|ROK1_ASPTN ATP-dependent RNA helicase rok1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rok1 PE=3 SV=2 Length=749 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 1/96 (1%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH + +R + ++ F+KG++ L+ TD+ ARG+D G+ V+N + Sbjct 540 PPEAGGSSRIAVLHSELSDSQRSEIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDI 599 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 P+ YVHR+GR GRA R G +++ KE + Y Sbjct 600 PNSAAVYVHRVGRTGRAGREG-GVAVTYYTKEDIPY 634 Score = 40.8 bits (94), Expect = 0.048, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 18/82 (22%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--------------DV 42 + +F E+ + +A+ + E + +PT++Q ++PL LG D+ Sbjct 191 LVSFKELRTKYKISRRLAENIAEQGFTVPTEVQLGTLPLQLGDSSVQQASKPGETVEPDL 250 Query 43 LMAAETGSGKTGAFSIPVIQIV 64 L+ A TGSGKT +F IPVI + Sbjct 251 LVVAPTGSGKTLSFLIPVINKI 272 >sp|Q54BD6|DDX51_DICDI Probable ATP-dependent RNA helicase ddx51 OS=Dictyostelium discoideum OX=44689 GN=ddx51 PE=3 SV=1 Length=563 Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 5/121 (4%) Query 511 IFCRTK-IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 I C TK +D + ++ G DK +F+C ER L RFK + L Sbjct 329 IICFTKSVDITHRLNTLLKLIGQVDKL--KFTCEEYSSSLSTVERADLLSRFKLNQIDIL 386 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 IC+D+ +RG+DI + VIN P YVHR+GR RA G++ ++V +K ++ Y+ Sbjct 387 ICSDIMSRGMDIQDIDVVINYNTPPNITLYVHRVGRTARAGNFGVSYTIV--DKSEIKYY 444 Query 630 V 630 + Sbjct 445 I 445 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (2%) Query 334 SVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 ++ E+ VDI+V TPGR+ D ++ T L + +LV+DEAD LL Q + D++ Sbjct 142 ALYESLVDIIVSTPGRIVDHINETLGFTLKYLNYLVIDEADRLLRQSFQDWL 193 Score = 36.6 bits (83), Expect = 0.92, Method: Compositional matrix adjust. Identities = 17/37 (46%), Positives = 25/37 (68%), Gaps = 2/37 (5%) Query 28 IQAESIPLI--LGGGDVLMAAETGSGKTGAFSIPVIQ 62 +Q E +P I G D+ + A TGSGKT A++IP++Q Sbjct 41 VQQEIVPFINRTEGHDICVCAPTGSGKTLAYAIPLVQ 77 >sp|Q0U6X2|MAK5_PHANO ATP-dependent RNA helicase MAK5 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=MAK5 PE=3 SV=1 Length=817 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 44/98 (45%), Positives = 60/98 (61%), Gaps = 8/98 (8%) Query 287 PKALIVEPSRELAEQTLNNIKQF--KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 P ALI+ P+RELA Q ++ K + P + + GG+A + Q LE DI+V Sbjct 326 PLALIIAPTRELAHQITAHLTALCAKGAFEAPLIAS--VTGGLAVQKQRRQLEKA-DIIV 382 Query 345 GTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQG 379 GTPGRL +++STG + Q+RFLV+DEAD LLSQG Sbjct 383 GTPGRLWEVISTGHGLLEKVKQIRFLVVDEADRLLSQG 420 Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/84 (42%), Positives = 46/84 (55%), Gaps = 0/84 (0%) Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 + LH R +++ERFK+ L+ TDVAARG+DI V VI+ LP Y Sbjct 566 LPALPLHSSMAQKARLRSIERFKERPGSILVATDVAARGLDIPKVELVIHYHLPRAADTY 625 Query 600 VHRIGRVGRAERMGLAISLVATEK 623 VHR GR RAE G +I + A E+ Sbjct 626 VHRSGRTARAEASGSSILICAPEE 649 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 42/61 (69%), Gaps = 0/61 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +A+ E+ + +I +++ ++ + PT IQA +IP I+ G DV+ A TGSGKT AF IP+I Sbjct 249 SAWEELELSTKILESLAKLKFSKPTTIQASTIPEIMAGRDVIGKASTGSGKTLAFGIPII 308 Query 62 Q 62 + Sbjct 309 E 309 >sp|Q0U397|MRH4_PHANO ATP-dependent RNA helicase MRH4, mitochondrial OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=MRH4 PE=3 SV=2 Length=658 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 85/349 (24%), Positives = 138/349 (40%), Gaps = 69/349 (20%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA---RDQLSVLENGV 340 P P+A+I+ PS EL Q K + K R I ++A R+QL E GV Sbjct 311 PARPRAIILVPSAELVAQVGAVAKSLSHTV---KFRAAPISAKMSATVIRNQL-FNEKGV 366 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 D+V+ TP L + + L++V L+ DEAD L + + + + + T K Sbjct 367 DVVISTPPLLASIAESNPNILARVTHLICDEADSLFDRSFKPSTTEI---LERATPSLK- 422 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 Q+I+CSAT+ P ++D D PD ++ +V P R + LG Sbjct 423 -QLILCSATI---------------PKYLDKYLADRFPD-MNRLVTPNLHAIPRRVQ-LG 464 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH-KMDQAIIFCRTKIDC 519 + D H N A + +W I GEY KE + ++F + D Sbjct 465 VVDVNKDPYHGNKNL---ACADTIWQ--IGRSTGEYDPAEGKEAVPTKRILVFVNEREDT 519 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV------------- 566 + + QY + +G + H D P + + L F D Sbjct 520 EKVAQYLMSKG---------IDALAFHRDTDPSRQAKTLASFTGSDTSTAIKSSPDAPPK 570 Query 567 ------------RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 + ++ TD+ +RGID V +VI +P +++HR+ Sbjct 571 PELASKRTLANTKVIVTTDLGSRGIDTVSVRHVILYDVPHTTIDFIHRL 619 Score = 38.1 bits (87), Expect = 0.31, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 20/96 (21%) Query 3 AFSEMGVMPEIAQAVEE----MDWLLPTDIQAESIPLILG--------------GGD--V 42 +F +M ++ + A+++ +++ PT Q+ ++P +LG GG Sbjct 183 SFDKMPLLDTVQAAIKDALPALEYRSPTPAQSVAVPALLGLEAKKRTKATSTKKGGPEAF 242 Query 43 LMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGK 78 L+AAETGSGKT A+ +P + + + + ++E + + Sbjct 243 LLAAETGSGKTLAYLLPTLDAIKKAEQQEKEDAEAQ 278 >sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP10 PE=3 SV=2 Length=914 Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 39/88 (44%), Positives = 51/88 (58%), Gaps = 3/88 (3%) Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 GH S + +G H RKQ L +F+ L+ TDVAARGIDI + V+N TLP Sbjct 412 GHLVSYI--YGTLDQHARKQQLYQFRAAYTNILVVTDVAARGIDIPVLANVVNYTLPGSS 469 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKE 624 + ++HR+GR RA G A S+V EKE Sbjct 470 KIFIHRVGRTARAGNKGWAYSIV-NEKE 496 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 38/60 (63%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ + + + + + PT IQ ++IPL++ DV+ A TGSGKT AF +PV++ Sbjct 100 SFASFGLSKFLLKNIAKKGFKQPTPIQRKTIPLVMESRDVVGMARTGSGKTAAFVLPVVE 159 >sp|Q1E306|ROK1_COCIM ATP-dependent RNA helicase ROK1 OS=Coccidioides immitis (strain RS) OX=246410 GN=ROK1 PE=3 SV=1 Length=730 Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 1/96 (1%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH + +R + F+KG++ LI TD+ ARG+D G+ V+N + Sbjct 525 PAEAGGSSRIAVLHSELSDSKRSDVMAGFRKGEIWVLITTDLLARGVDFRGINGVVNYDI 584 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 P+ +YVHR+GR GRA R G +++ KE + Y Sbjct 585 PNSSASYVHRVGRTGRAGREG-GVAVTFYTKEDIPY 619 Score = 37.4 bits (85), Expect = 0.56, Method: Compositional matrix adjust. Identities = 21/66 (32%), Positives = 33/66 (50%), Gaps = 21/66 (32%) Query 22 WLLPTDIQAESIPLILGGG---------------------DVLMAAETGSGKTGAFSIPV 60 + +PT++Q S+PL+LG D+L+ A TGSGKT +F IP+ Sbjct 196 YTVPTEVQLGSLPLLLGNAPAPNERTADDESLRSQSEREPDLLVVAPTGSGKTLSFMIPL 255 Query 61 IQIVYE 66 I + + Sbjct 256 INKIMK 261 >sp|Q4IPI1|ROK1_GIBZE ATP-dependent RNA helicase ROK1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=ROK1 PE=3 SV=1 Length=693 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 79/305 (26%), Positives = 119/305 (39%), Gaps = 59/305 (19%) Query 341 DIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 DI+V TP L +++G + L VR L+LDEAD LL D + R Sbjct 329 DILVTTPFLLFKFLTSGPPSTQKVLPTVRDLILDEADVLL-----DPLFRDATMADWTAC 383 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK-----------GEDSVPDTVHHVV 445 L+V SAT+ S ++EK+ +D+ + +VP+ H ++ Sbjct 384 TNTNLRVSFWSATMGSNIESMVTEKLTSRAQSLDITPKPFVRLVVGLKDTAVPNIAHKLI 443 Query 446 VPVNPKTDRLWERLGKSHIRTDDVH--AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + + GK +H A D++ P P Sbjct 444 YTASEQ--------GKLLALRQLLHPTASDDSGPPLRPP--------------------- 474 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 ++F +T L + Q P + G LH R + +F+ Sbjct 475 -----FLVFTQTIDRATALHEEL--QYDIPLEAGGAARIAALHSGLTDSARSSIMRKFRA 527 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 GD+ LI TDV ARG+D GV V+N +P YVHR GR GRA R G I++ K Sbjct 528 GDIWILITTDVLARGVDFAGVNGVVNYDVPGSSAGYVHRAGRTGRAGREG-GIAVTFYTK 586 Query 624 EKVWY 628 E + + Sbjct 587 EDIPF 591 Score = 38.5 bits (88), Expect = 0.25, Method: Compositional matrix adjust. Identities = 26/91 (29%), Positives = 44/91 (48%), Gaps = 17/91 (19%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLIL-------------GGGDVL 43 + +F E+ G+ ++A + + +PT++Q S+PL++ GG D L Sbjct 154 LDSFGELRNAYGLSDKVADNLVFQGYRVPTEVQMGSLPLLVHPQAALKDEDGLDGGVDFL 213 Query 44 MAAETGSGKTGAFSIPVIQIVYETLKDQQEG 74 A TGSGKT +F IP I + ++ G Sbjct 214 AIAPTGSGKTISFLIPAINNILRRRSEENTG 244 >sp|P0CR04|ROK1_CRYNJ ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=ROK1 PE=3 SV=1 Length=620 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/96 (38%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +HG + +R + ++ F+ G V L+ T+V ARG+D GV VIN P +Y+HRI Sbjct 451 AVHGGKAKTKRDEAIKDFRVGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 510 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSS-RGKGC 638 GR GRA R G AI+ E + + R GC Sbjct 511 GRTGRAGRPGKAITFFNIEDGPYLRTIANVLRSSGC 546 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 35/46 (76%), Gaps = 3/46 (7%) Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+D++V TP RL L+ + +++L++ ++++LDE+D LLS SDF+ Sbjct 298 GIDMLVATPERLHHLIDSRRISLARTKYVILDESDRLLS---SDFL 340 >sp|P0CR05|ROK1_CRYNB ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=ROK1 PE=3 SV=1 Length=620 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/96 (38%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +HG + +R + ++ F+ G V L+ T+V ARG+D GV VIN P +Y+HRI Sbjct 451 AVHGGKAKTKRDEAIKDFRVGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 510 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSS-RGKGC 638 GR GRA R G AI+ E + + R GC Sbjct 511 GRTGRAGRPGKAITFFNIEDGPYLRTIANVLRSSGC 546 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 35/46 (76%), Gaps = 3/46 (7%) Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+D++V TP RL L+ + +++L++ ++++LDE+D LLS SDF+ Sbjct 298 GIDVLVATPERLHHLIDSRRISLARTKYVILDESDRLLS---SDFL 340 >sp|A7F2S3|SPB4_SCLS1 ATP-dependent rRNA helicase spb4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=spb4 PE=3 SV=1 Length=625 Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%) Query 539 QFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 QF+ V LHG P+ R++N ++ L+ TDVAARG+DI V V+ + P + + Sbjct 317 QFALVSLHGKHPPNVRQRNFSKYVAAVSPTILLTTDVAARGLDIPQVDLVVQIDPPSDPK 376 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEK 625 ++HR GR GRA R GL++ + +E+ Sbjct 377 VFLHRCGRAGRAGRKGLSVIFLQPGREE 404 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/133 (32%), Positives = 71/133 (53%), Gaps = 23/133 (17%) Query 289 ALIVEPSRELAEQ-----------------TLNNIKQFKKYIDNPKLREL--LIIGGVA- 328 A+IV P+RELA Q L +++ +K + LR + L++GG Sbjct 90 AIIVSPTRELATQIHSVLTSLLAFHEPSAGALKPLEEGEKRKPSSTLRVVSQLLLGGTTT 149 Query 329 -ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSDFIN 385 A+D L+N ++++ TPGRL +L+S+ ++ Q F LVLDEAD LL G+ D + Sbjct 150 PAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQ 209 Query 386 RMHNQIPQVTSDG 398 ++ +++P+ G Sbjct 210 KILSRLPKQRRTG 222 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 I A++ M + T +QA +IPL +G DV++ A TGSGKT +F IPV++ Sbjct 25 ILDAIKSMGFEKMTPVQASTIPLFMGNKDVVVEAVTGSGKTLSFLIPVVE 74 >sp|Q1E9B7|MRH4_COCIM ATP-dependent RNA helicase MRH4, mitochondrial OS=Coccidioides immitis (strain RS) OX=246410 GN=MRH4 PE=3 SV=1 Length=656 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 102/366 (28%), Positives = 155/366 (42%), Gaps = 49/366 (13%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVV 344 PKA+I+ P+ EL EQ +KQ + K R L+ R L NG+DI+V Sbjct 296 PKAIILVPTSELVEQIGRIVKQLAHTV---KYRSALLASNYTPRKIRKTLFNPNGLDILV 352 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP + + S+V LV+DEAD L + +S N + ++ Q+I Sbjct 353 TTPYLVASIAEANPYIFSRVTHLVVDEADSLFDKSFSPKTNTIIDRTAPTLK-----QLI 407 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPK----------T 452 +CSAT+ +L E+ FP L + ++P V VV ++ + Sbjct 408 LCSATIPRSLDNRLRER---FPQIRRLVTPNLHAIPRRVQLGVVDIDKEPYRGRRHLACA 464 Query 453 DRLWERLGKSHIRTD-DV--HAKDNTRPGA-----NSPEMWSEAIKIL--KGEYAV---R 499 D +W +G+S D DV P + N E +E + L KG AV R Sbjct 465 DAIWS-IGRSGNPYDADVGYQVTGQKEPKSIIVFVNERETAAEVAEFLVTKGINAVSLTR 523 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 E + Q + T+ + E Y + +G D F V R +ER L Sbjct 524 DTSEKRQAQILAEFTTEKNPPQPEDYKMLKGNRSDDDSVPFVNV-----RPGNERSNRL- 577 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + + L+ TD+ +RGID V VI +P +++HR+GR+GR R G I LV Sbjct 578 ----SNTKVLVVTDLGSRGIDTVAVKTVILYDVPHSTIDFIHRLGRLGRMGRRGRGIVLV 633 Query 620 ATEKEK 625 + K Sbjct 634 GKKDRK 639 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 45/89 (51%), Gaps = 22/89 (25%) Query 1 MAAFSEMGVMPEIAQAVEE-----MDWLLPTDIQAESIPLILGGGDV------------- 42 + +F + ++P + Q+V + ++++ PT IQ +IP IL G Sbjct 156 ITSFDQFDLLPSVRQSVYDSALPGLEYVTPTPIQRLAIPAILRQGSATPKPEEGQEDMPR 215 Query 43 ----LMAAETGSGKTGAFSIPVIQIVYET 67 L+AAETGSGKT A+ +PV+ + T Sbjct 216 FDQYLLAAETGSGKTLAYLLPVVDAIKRT 244 >sp|Q0CZS8|HAS1_ASPTN ATP-dependent RNA helicase has1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=has1 PE=3 SV=1 Length=576 Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/87 (38%), Positives = 46/87 (53%), Gaps = 0/87 (0%) Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 + LHG K R Q F LICTDVAARG+DI V Y+I PDE + Y+H Sbjct 372 VLALHGKLKQQTRTQRFFEFCNATQGTLICTDVAARGLDIPAVDYIIQFDPPDEPKAYIH 431 Query 602 RIGRVGRAERMGLAISLVATEKEKVWY 628 R+GR R + + S++ + +V + Sbjct 432 RVGRTARGTKGKIGRSIMLLQPSEVGF 458 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 46/167 (28%), Positives = 79/167 (47%), Gaps = 8/167 (5%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N +I+ P+RELA Q K+ ++ ++IGG R + Sbjct 160 LSALRFKPRNGTGVIIITPTRELALQIFGVAKELCEFHSQTYG---IVIGGANRRAEAEK 216 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV++++ TPGR LD L +T + LVLDEAD L G+ + ++ +P Sbjct 217 LNKGVNLLIATPGRLLDHLQNTQGFVYKNCKVLVLDEADRCLDVGFEAELRQIVKILP-- 274 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 S+ ++ + + T D+ ++S K VD + E + D V Sbjct 275 -SEERQTLLFSATQTTKVEDLARISLKPGPLYINVDHRKEHATVDGV 320 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+ + +A+ +M + T+IQ +IP L G D+L AA+TGSGKT AF IP +++ Sbjct 100 FDELNLSEPTMKAIRQMGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEM 159 Query 64 V 64 + Sbjct 160 L 160 >sp|A6RMZ2|SPB4_BOTFB ATP-dependent rRNA helicase spb4 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=spb4 PE=3 SV=1 Length=626 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 33/88 (38%), Positives = 51/88 (58%), Gaps = 1/88 (1%) Query 539 QFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 QF V LHG P+ R++N ++ L+ TDVAARG+DI V V+ + P + + Sbjct 318 QFGLVSLHGKHPPNVRQRNFSKYVAAVSPTILLTTDVAARGLDIPQVDLVVQIDPPSDPK 377 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEK 625 ++HR GR GRA R GL++ + +E+ Sbjct 378 VFLHRCGRAGRAGRKGLSVIFLQPGREE 405 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 42/133 (32%), Positives = 70/133 (53%), Gaps = 23/133 (17%) Query 289 ALIVEPSRELAEQ-----------------TLNNIKQFKKYIDNPKLREL--LIIGGVA- 328 A+IV P+RELA Q L +++ +K + LR + L++GG Sbjct 90 AIIVSPTRELATQIHSVLTSLLKFHEPSAEALQPLEEGEKRKPSSTLRVIPQLLLGGTTT 149 Query 329 -ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSDFIN 385 A+D L+N ++++ TPGRL +L+S+ ++ Q F LVLDEAD LL G+ D + Sbjct 150 PAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEADRLLDLGFKDDLQ 209 Query 386 RMHNQIPQVTSDG 398 ++ ++P+ G Sbjct 210 KILGRLPKQRRTG 222 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/59 (41%), Positives = 37/59 (63%), Gaps = 4/59 (7%) Query 8 GVMPEIAQ----AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + P +A+ A+ M + T +QA +IPL +G DV++ A TGSGKT +F IPV++ Sbjct 16 ALTPSLAEWVLDAISSMGFEKMTPVQASTIPLFMGNKDVVVEAVTGSGKTLSFLIPVVE 74 >sp|Q6BKH3|DBP7_DEBHA ATP-dependent RNA helicase DBP7 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP7 PE=3 SV=1 Length=798 Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/165 (28%), Positives = 88/165 (53%), Gaps = 14/165 (8%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+I+ P+REL Q ++ + + + ++IGG + + + L GV+I+V TPG Sbjct 241 AIILVPTRELCTQIYGVLETLVRC--HHHIVPGIVIGGEKKKSEKARLRKGVNILVATPG 298 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV---- 403 RL D + +T L++SQ+R+L+LDE D L G+ + I ++ + I + + + + Sbjct 299 RLADHMENTTSLDVSQLRWLILDEGDRLTELGFEETITKITDNISKNSKISETIHKYQGL 358 Query 404 ------IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 ++CSAT+ +VKKL I++ P + + + T++ Sbjct 359 PTERVNVLCSATIQD-NVKKLGNMILNNPETISVDSNKQIEGTLN 402 Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 9/85 (11%) Query 541 SCVC-LHGDRKPHERKQNLERFKK--------GDVRFLICTDVAARGIDIHGVPYVINVT 591 SCV LHG +R L+ F K L CTDVA+RG+D+ + VI Sbjct 535 SCVYKLHGSLSQQQRATTLQAFIKEKNEGKNSAKHSILFCTDVASRGLDLPNISSVIEYD 594 Query 592 LPDEKQNYVHRIGRVGRAERMGLAI 616 P ++++HRIGR R G A+ Sbjct 595 PPFSVEDHLHRIGRSARVGNEGSAV 619 Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 34/63 (54%), Gaps = 2/63 (3%) Query 2 AAFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIP 59 F +G+ ++A E + + PT +Q IP LI D+ + A+TGSGKT +F +P Sbjct 161 TTFDGLGLNDKLATHLTESLRFKAPTKVQRSVIPSLIATQRDLFVKAQTGSGKTLSFLLP 220 Query 60 VIQ 62 + Sbjct 221 IFH 223 >sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=ROK1 PE=3 SV=1 Length=553 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 8/123 (7%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +H +R P +R + ++RFK GD+ LI TDV ARG+D GV VIN +P Q YVHRI Sbjct 395 VIHAERTPKQRDEVIKRFKNGDIWVLITTDVLARGVDFKGVNMVINYDVPQSAQAYVHRI 454 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCS-SRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 GR GR R G A++ E +K + + + GC + G + W ++ LS+ Sbjct 455 GRTGRGGRSGKAVTFFTKEDDKAVKPIINVMKQSGCTD-------GLSDWMEDLGKLSKR 507 Query 663 EEH 665 E+ Sbjct 508 EKR 510 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 10/171 (6%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 V+Q + + LI+ P+ ELA Q ++ K L ++ +A + V+ Sbjct 183 VSQNVLKNHGIRGLIISPTNELAVQIFQQLEIISK---GKGLNIAILSKQLAGKISNDVV 239 Query 337 E-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 + + DI+V TP RL D+V GK++LS+V LV+DEAD L G+++ + + + V Sbjct 240 KASKYDILVSTPLRLIDVVKLGKVDLSKVTQLVIDEADKLFDHGFAEQTDELLSHCTNV- 298 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 +++ + SAT+ S V++++ IM P V + +++ +T+ +V Sbjct 299 ----KIRKSMFSATIPS-GVEEMAHSIMKDPIRVIIGHKEAASNTIEQKLV 344 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/44 (48%), Positives = 31/44 (70%), Gaps = 0/44 (0%) Query 19 EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + +++ PT IQ E+IP+ L D++ A TGSGKT AF IP++Q Sbjct 137 DAEFVEPTPIQCEAIPITLANRDLIACAPTGSGKTLAFLIPLLQ 180 >sp|A4QX49|DBP7_PYRO7 ATP-dependent RNA helicase DBP7 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP7 PE=3 SV=1 Length=825 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/146 (29%), Positives = 81/146 (55%), Gaps = 16/146 (11%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+REL +Q +++ + P + +IGG + + + + G++I++ TPG Sbjct 222 AIVLAPTRELCKQIATVLEKLLRCA--PWIVSTTVIGGESKHSEKARIRKGINILIATPG 279 Query 349 RLDD-LVSTGKLNLSQVRFLVLDEADGLLSQGYSD----FINRMHNQ-IPQVTSDGKRLQ 402 RL D L +T L++S R+L+LDE D ++ G+ D +++M + ++ DG +L+ Sbjct 280 RLKDHLDNTKVLDVSLARWLILDEGDRMMEMGFMDDLKEIVSKMREAPLKKINPDGIQLE 339 Query 403 --------VIVCSATLHSFDVKKLSE 420 ++CSATL V++L E Sbjct 340 PALPTRRVTVLCSATLDHAQVRRLGE 365 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 29/73 (40%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query 545 LHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 LHG R L+ F K D LI TD+++RG+D+ V VI ++VHRI Sbjct 518 LHGSLAQPVRTATLDSFSKSKDPSILITTDISSRGLDVPAVDLVIEYDPAFAVADHVHRI 577 Query 604 GRVGRAERMGLAI 616 GR RA R G A+ Sbjct 578 GRTARAGRPGKAV 590 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (4%) Query 2 AAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIP 59 A F+ +G+ IAQ + +++ PT IQ ++P L+ D + A+TGSGKT A+ +P Sbjct 131 ATFAALGLSRRIAQHLSAKLELKAPTAIQHRAVPHLVTTDEDAFLQAQTGSGKTLAYLLP 190 Query 60 VIQIVYETLKDQQEGKKGKTTIK 82 ++ + L ++G K K Sbjct 191 IVNRIL-ALNQNEDGTISKDASK 212 >sp|P0CR03|DBP8_CRYNB ATP-dependent RNA helicase DBP8 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP8 PE=3 SV=1 Length=619 Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/106 (36%), Positives = 56/106 (53%), Gaps = 5/106 (5%) Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 V LH +R +L RF+ +V L+ TDV +RG+DI V VIN P +Y Sbjct 463 IPSVPLHSHLTQPQRLLSLARFRAHEVPVLVTTDVGSRGLDIPEVAMVINWDCPRRSDDY 522 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VHR+GR RA R G+A++++ TE++ + N RL+E Sbjct 523 VHRVGRTARAGRGGVAVTII-TERDTELVKIIEDE----VNVRLEE 563 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 6/107 (6%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+RELA Q K + L I+GG+ Q LE I+V TPG Sbjct 223 AVVLTPTRELAYQLSEQFLVIGKPLG---LTTATIVGGMDMMKQAQELEARPHIIVATPG 279 Query 349 RLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 RL DL+ +G + LS+VR LVLDEAD +L+ ++ + + +QIP Sbjct 280 RLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLFSQIP 326 Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 37/59 (63%), Gaps = 0/59 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +G+ + A+ ++ PT+IQA + IL G D + A+TGSGKT AF++P+++ Sbjct 154 FESLGLSRPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212 >sp|P0CR02|DBP8_CRYNJ ATP-dependent RNA helicase DBP8 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP8 PE=3 SV=1 Length=619 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/106 (36%), Positives = 56/106 (53%), Gaps = 5/106 (5%) Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 V LH +R +L RF+ +V L+ TDV +RG+DI V VIN P +Y Sbjct 463 IPSVPLHSHLTQPQRLLSLARFRAHEVPVLVTTDVGSRGLDIPEVAMVINWDCPRRSDDY 522 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VHR+GR RA R G+A++++ TE++ + N RL+E Sbjct 523 VHRVGRTARAGRGGVAVTII-TERDTELVKIIEDE----VNVRLEE 563 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 6/107 (6%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+++ P+RELA Q K + L I+GG+ Q LE I+V TPG Sbjct 223 AVVLTPTRELAYQLSEQFLVIGKPLG---LTTATIVGGMDMMKQAQELEARPHIIVATPG 279 Query 349 RLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 RL DL+ +G + LS+VR LVLDEAD +L+ ++ + + +QIP Sbjct 280 RLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLFSQIP 326 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +G+ + A+ ++ PT+IQA + IL G D + A+TGSGKT AF++P+++ Sbjct 154 FESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVER 213 Query 64 V 64 + Sbjct 214 I 214 >sp|O74393|MAK5_SCHPO ATP-dependent RNA helicase mak5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mak5 PE=1 SV=1 Length=648 Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 0/87 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LH +R Q+LE+FK L+CTDVAARGIDI V +VI+ +P YVHR G Sbjct 419 LHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAARGIDIPSVTHVIHYHVPHTADMYVHRSG 478 Query 605 RVGRAERMGLAISLVATEKEKVWYHVC 631 R RA G++I + ++ +C Sbjct 479 RTARANEDGVSILMCGPKELSQLKRLC 505 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/102 (35%), Positives = 61/102 (60%), Gaps = 5/102 (5%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +AL+V P+RELA Q + + K +P +R + I GG+A + Q +L +VV TP Sbjct 194 QALVVAPTRELAHQICQHFELIKP---SPNIRVMSITGGLAVQKQQRLLNKHPHVVVATP 250 Query 348 GRLDDLVSTGKL--NLSQVRFLVLDEADGLLSQGYSDFINRM 387 GRL +++ L N +++ LVLDEAD LL + + + ++++ Sbjct 251 GRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKL 292 Score = 42.4 bits (98), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/62 (34%), Positives = 38/62 (61%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A++ + PE+ ++ + + P IQ+ IP G D++ A+TGSGKT AF IP+ Sbjct 121 VSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPI 180 Query 61 IQ 62 ++ Sbjct 181 LE 182 >sp|Q0UP45|SPB4_PHANO ATP-dependent rRNA helicase SPB4 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=SPB4 PE=3 SV=1 Length=633 Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 86/386 (22%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY-------------------IDNP----------KLR 319 A+I+ P+RELA Q + K+ D P K Sbjct 87 AIIISPTRELATQIHTVLSSLLKFHAPSAAMLEPDDEDTDMEDADTPPKPTFPPGTLKAV 146 Query 320 ELLIIGG--VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGL 375 L++GG A+D + L+ +I++GTPGRL +L+ + ++ Q F LV+DEAD L Sbjct 147 PQLLLGGSVTPAQDLSAFLKKSPNILIGTPGRLLELLRSPHVHCPQSSFDALVMDEADRL 206 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK--- 432 L G+ + + ++ +++P+ G + SA++ S V +L + P + +K Sbjct 207 LDLGFKEDLQKIISRLPKQRRTG------LFSASM-SEAVDQLIRVGLRNPVRIAVKVKA 259 Query 433 ---GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 GED + P + L S++ T P P M Sbjct 260 RATGEDG---KIEDKRTPAS---------LQMSYLVTP---------PSHKIPAMK---- 294 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 KIL + + ++I++ T D + + G D V LHG Sbjct 295 KILSS-------LQPQPQKSILYLSTCFSVDYFQHVLPEVLQGYD-------IVPLHGKH 340 Query 550 KPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 R++N +F L+ TDVAARG+DI V V + P + + ++HR GR GR Sbjct 341 PDKVRRKNFNKFVDSVTPSILLTTDVAARGLDIPSVDLVFQLDPPSDPKTFIHRCGRAGR 400 Query 609 AERMGLAISLVATEKEKVWYHVCSSR 634 A R GLA++ + +E+ + R Sbjct 401 AGRRGLAVTFLNPGREEDYIEFLQVR 426 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 I AV+ M ++ T +Q +IP+ + DV++ A TGSGKT AF IP+++ Sbjct 22 IIDAVDAMGFVKTTPVQHAAIPMFMKNSDVVVEAVTGSGKTLAFLIPIVE 71 >sp|Q5AZA6|DBP9_EMENI ATP-dependent RNA helicase dbp9 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp9 PE=3 SV=1 Length=610 Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 51/150 (34%), Positives = 76/150 (51%), Gaps = 8/150 (5%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A LI+ P+RELAEQ I F + +R + + V+ Q ++L + DIVV Sbjct 102 ATTGLILVPTRELAEQVQKVITTFAAFC-GKDVRSVNLTQKVSDAVQKAMLADYPDIVVS 160 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TP R+ + T L+L + LV+DEAD +LS GY D IN + IP + +Q + Sbjct 161 TPARVIANLGTSALSLENLTHLVIDEADLVLSYGYEDDINALSKAIP------RGVQTFL 214 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 SATL + +V L P + L+ +D Sbjct 215 MSATLTA-EVDTLKGLFCRSPVILKLEDKD 243 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 42/63 (67%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +QA++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 30 FETLNLDPRLRQALVKEKFSKPTPVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 89 Query 64 VYE 66 + + Sbjct 90 ILQ 92 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/44 (48%), Positives = 28/44 (64%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V V+N LP ++Y HRIGR GR + G+A+S V Sbjct 389 SRGIDFQNVACVLNFDLPTSSKSYTHRIGRTGRGGKTGMALSFV 432 >sp|Q59S59|MRH4_CANAL ATP-dependent RNA helicase MRH4, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MRH4 PE=3 SV=2 Length=555 Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 88/379 (23%), Positives = 150/379 (40%), Gaps = 78/379 (21%) Query 288 KALIVEPSRELAEQTLNNIKQ--------------FKKYIDNPKLRELLIIG-----GVA 328 K++I+ P+ EL +Q +++ F +++ P+ + + I G A Sbjct 201 KSVILLPTNELVDQVYETLQRANSFELDHKGAPGNFTSFLELPENKTMNITTMKLGQGEA 260 Query 329 ARDQLSVLENG--VDIVVGTPGRLDDLVSTGKLN-----LSQVRFLVLDEADGLLSQGYS 381 LE +D+++ TPG++ +N + V++ VLDEAD L + Sbjct 261 PVRLFRQLETKGPIDVLITTPGKIVAFSKLVNINRPFRVFANVKYCVLDEADTLFDDSFE 320 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 N +T K L +I+ SAT+ KKLS+ FP L Sbjct 321 ------KNTTDVITHFPKLLDLILVSATIPKVFEKKLSK---LFPDQRSL---------- 361 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR-- 499 V P K R +I+ + A D + P ++A+ YA+ Sbjct 362 IRVATPSLHKVPR--------NIKVMTIDA-DVAPYNGSKPRCLAQAL------YAISKD 406 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + + + I+F K + D + + I + K V + G +RK L+ Sbjct 407 GTEPGYVKRIIVFVNEKSEVDGIVESMITK-----YKVRPEDIVGVSGSVNIRDRKDMLQ 461 Query 560 RFKK-----------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 F + V+ L+ TD+ ARG++ GV VI + LP + VHR+GR GR Sbjct 462 PFLQPAELIENDDFGSKVKILVTTDLLARGLNFQGVKNVILLGLPRNSVDLVHRLGRTGR 521 Query 609 AERMGLAISLVATEKEKVW 627 + G +V + +K W Sbjct 522 MNQNGRVFVIVDKKSKKSW 540 >sp|A6RSH5|DBP7_BOTFB ATP-dependent RNA helicase dbp7 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp7 PE=3 SV=1 Length=877 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 53/164 (32%), Positives = 85/164 (52%), Gaps = 27/164 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+I+ P+REL +Q +++ + P + + GG + + + + L GV+I+V TPG Sbjct 337 AIILSPTRELCKQIAAVLEKVLRCA--PWIVGTTVNGGESKQSEKARLRKGVNILVATPG 394 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM-----HNQIPQVTSD----G 398 RL D L +T LN++ VR+LVLDE D L+ G+ + I + + + SD Sbjct 395 RLADHLDNTEVLNVATVRWLVLDEGDRLMELGFEEEIKGIVEKIGRRSVAKANSDMGSLP 454 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 KR I+CSAT+ +V++L GE S+ D VH Sbjct 455 KRRVTILCSATM-KMNVQRL--------------GEISLKDAVH 483 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 54/106 (51%), Gaps = 4/106 (4%) Query 545 LHGDRKPHERKQNLERFKK-GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 LHG + R L+ F + D +ICTDVA+RG+D+ V +VI P ++++HR+ Sbjct 612 LHGSLAQNIRTATLKAFSESADPCVMICTDVASRGLDLPNVDFVIEYDPPFSAEDHLHRV 671 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSS---RGKGCYNTRLKED 646 GR RA R G A+ + E+ + + +S GK ED Sbjct 672 GRTARAGREGRALIFLMPGVEEEYVSILASGYREGKKALTRHTAED 717 Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/66 (35%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query 1 MAAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSI 58 MA F+ +G+ +A + ++D PT IQ S+ L+ D + AETGSGKT A+ + Sbjct 254 MATFTNLGLSRRLAAHLSTKLDMKAPTAIQKASVQQLVSDDSDAFIQAETGSGKTLAYLL 313 Query 59 PVIQIV 64 P+++ + Sbjct 314 PIVERI 319 >sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0647900 PE=2 SV=2 Length=540 Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 0/88 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +H D +R+ ++ + G LI T+V ARG+D GV VIN P+ Y+HRIG Sbjct 415 IHADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIG 474 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCS 632 R GRA R G AI+ E + ++ + Sbjct 475 RSGRAGRSGEAITFFTEEDKPFLRNIAN 502 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 11/137 (8%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 KA+I+ P+RELA QT K+ K K L+ ++ + DI++ TP Sbjct 217 KAVILCPTRELAAQTTRECKKLAK---GRKFYIKLMTKDLSKSGNFKDMH--CDILISTP 271 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 RLD V L+LS+V +LVLDE+D L G+ + I + + + S+ ++ + S Sbjct 272 LRLDHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVI----DSVVKACSNPSIIRSLF-S 326 Query 408 ATLHSFDVKKLSEKIMH 424 ATL ++ L+ IMH Sbjct 327 ATLPD-SIETLARTIMH 342 Score = 42.0 bits (97), Expect = 0.018, Method: Compositional matrix adjust. Identities = 18/37 (49%), Positives = 25/37 (68%), Gaps = 0/37 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 PT IQ ++IP++L G + A TGSGKT AF P++ Sbjct 169 PTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPIL 205 >sp|P47664|Y425_MYCGE Probable ATP-dependent RNA helicase MG425 OS=Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37) OX=243273 GN=MG425 PE=3 SV=1 Length=449 Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/109 (36%), Positives = 61/109 (56%), Gaps = 9/109 (8%) Query 286 APKALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 A L++ P+REL EQ T +NI + N KLR + +IGGV A Q+ ++ I Sbjct 72 AKPTLVIAPTRELVEQIKTTFSNIAK------NKKLRIISLIGGVPAWKQIKKIKTNPQI 125 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 +VGT GR+ DL+ ++ S + L++DE D +L +G+ I + QI Sbjct 126 IVGTMGRIMDLLERKAIHFSDLEHLIIDEVDLMLDRGFKKQIFNLLEQI 174 Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 10/128 (8%) Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 IK ++ I+FC TK D+L + + ++ LHGD+K R++NL+ Sbjct 242 IKTAQVKSIIVFCDTKKLVDDLHVFL---------RKNELRTFALHGDKKQFIRERNLKI 292 Query 561 FKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 F L+ TD+ RGI + + VIN + + Y++R+GR GR G ++ Sbjct 293 FANTKQPTILVTTDLIGRGIHVEAIDMVINYSACLNLEAYINRMGRTGRNNHKGTCVTFC 352 Query 620 ATEKEKVW 627 ++++KV+ Sbjct 353 TSQEKKVF 360 Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/74 (34%), Positives = 43/74 (58%), Gaps = 3/74 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F E+G+ + + + + PT IQ SIP L ++++ + TG+GKT AF+IP+I Sbjct 3 STFHELGISQTLIETLNALHINKPTKIQQISIPQFLSEKNLIVHSPTGTGKTAAFAIPII 62 Query 62 QIVYETLKDQQEGK 75 + + LK+ Q K Sbjct 63 E---KLLKEDQTAK 73 >sp|Q0CY48|DBP9_ASPTN ATP-dependent RNA helicase dbp9 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp9 PE=3 SV=2 Length=619 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/161 (32%), Positives = 80/161 (50%), Gaps = 8/161 (5%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A LI+ P+RELAEQ N I F + +R + + V+ Q ++L + D++V Sbjct 101 ATTGLILVPTRELAEQVQNVITTFAAFC-GKDVRSVNLTQKVSDAVQRTMLADYPDLIVS 159 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TP R+ + + L+L + LV+DEAD +LS GY + IN + IP + +Q + Sbjct 160 TPSRVIANLGSSALSLENLTHLVIDEADLVLSYGYDEDINALAKAIP------RGVQTFL 213 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 SATL + +V L P + L+ +D V VV Sbjct 214 MSATLTA-EVDTLKGLFCRSPVILKLEDKDDQGSGVSQFVV 253 Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 42/63 (67%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +QA++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 29 FESLNLDPRLRQALVKEKFTKPTLVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 88 Query 64 VYE 66 + + Sbjct 89 ILQ 91 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 29/44 (66%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V V+N LP ++Y HRIGR GRA + G+A+S V Sbjct 395 SRGIDFQNVACVLNFDLPTTSKSYTHRIGRTGRAGKTGMALSFV 438 >sp|Q2HCV7|ROK1_CHAGB ATP-dependent RNA helicase ROK1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=ROK1 PE=3 SV=1 Length=667 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 33/81 (41%), Positives = 42/81 (52%), Gaps = 0/81 (0%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH R + + RF+ G+V L+ TDV ARG+D GV V+N + Sbjct 464 PLEAGGSARVAVLHSSMADSARSKIMARFRAGEVWVLVTTDVLARGVDFAGVNGVVNYDV 523 Query 593 PDEKQNYVHRIGRVGRAERMG 613 P YVHR GR GRA R G Sbjct 524 PTSAAAYVHRAGRTGRAGREG 544 Score = 40.4 bits (93), Expect = 0.057, Method: Compositional matrix adjust. Identities = 29/97 (30%), Positives = 44/97 (45%), Gaps = 24/97 (25%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLIL------------------G 38 + +F E+ V P++A + + +PT++Q S+PL+L Sbjct 170 LTSFGELRHTYDVSPQLAANIAAQGFRVPTEVQMASLPLLLQPTTALKKSEGADIPNIDN 229 Query 39 GGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGK 75 G D L A TGSGKT F IP I V + +EG+ Sbjct 230 GADFLAVAPTGSGKTITFLIPAIDGVLR--RRAEEGR 264 >sp|A4RMV8|ROK1_PYRO7 ATP-dependent RNA helicase ROK1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=ROK1 PE=3 SV=1 Length=775 Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 36/91 (40%), Positives = 44/91 (48%), Gaps = 1/91 (1%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P G LH R + RF+ DV LI TDV ARG+D GV V+N + Sbjct 574 PAAAGGASRVAVLHSSMPESARAAVIRRFRAADVWVLITTDVLARGVDFAGVNGVVNYDV 633 Query 593 PDEKQNYVHRIGRVGRAERM-GLAISLVATE 622 P YVHR GR GRA R G+A++ E Sbjct 634 PGSAAAYVHRAGRTGRAGRKGGIAVTFYTKE 664 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 21/47 (45%), Positives = 28/47 (60%), Gaps = 4/47 (9%) Query 340 VDIVVGTPGRLDDLVSTG----KLNLSQVRFLVLDEADGLLSQGYSD 382 DI+V TP L + +S G K L +VR L+LDEAD LL Q + + Sbjct 398 ADILVTTPMLLLNFLSKGTSTTKKRLPRVRSLILDEADVLLDQLFRE 444 >sp|A2QA23|DBP6_ASPNC ATP-dependent RNA helicase dbp6 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp6 PE=3 SV=1 Length=593 Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 36/130 (28%), Positives = 66/130 (51%), Gaps = 4/130 (3%) Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 K ++ L +++G + +I TD A+RG+D+ + +V+N +P YVHR+GR RA Sbjct 457 KSSASRKTLTAYRRGKISVIIATDRASRGLDLRSLTHVVNYDVPASITTYVHRVGRTARA 516 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT 669 + G A +LVA +E W+ ++G TR + G + M+ E++ Sbjct 517 GQKGSAWTLVA-HREGKWFASQIAKGSDGKITRSTKVGKVQFKLDNMK---EVKARYASA 572 Query 670 ISQVEPDIKV 679 + +E ++K Sbjct 573 LDLLEKEVKT 582 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 43/124 (35%), Positives = 65/124 (52%), Gaps = 23/124 (19%) Query 277 VTQTKFLPNAPK--ALIVEPSRELAEQTLNNIKQFKKYID----NPKLRELLIIGGVAAR 330 VT K LP AP+ LIV P+REL +KQ ++ + LR +G VA + Sbjct 185 VTALKPLP-APRLRGLIVVPTREL-------VKQAREACELCAAGSGLRVASAVGNVAIK 236 Query 331 DQ--------LSVLENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 D+ + E VDI++ TPGRL D L T L + +LV+DEAD LL++ + Sbjct 237 DEQRESLPGYVHRSEPNVDILICTPGRLVDHLRYTKGFTLKNLEWLVIDEADRLLNESFQ 296 Query 382 DFIN 385 ++++ Sbjct 297 EWVD 300 Score = 38.5 bits (88), Expect = 0.25, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 39/63 (62%), Gaps = 5/63 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG-----GDVLMAAETGSGKTGAFSI 58 F+++G+ + + +E+ + +Q+ IPL+L G GD+ ++A TGSGKT ++ + Sbjct 123 FADLGIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPTNHPGDLCISAATGSGKTLSYVL 182 Query 59 PVI 61 P++ Sbjct 183 PLV 185 >sp|P0CQ84|HAS1_CRYNJ ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=HAS1 PE=3 SV=1 Length=607 Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 43/72 (60%), Gaps = 0/72 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R F L+CTDVAARG+DI V ++I PD+ ++Y+HR+G Sbjct 406 LHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVG 465 Query 605 RVGRAERMGLAI 616 R RA + G ++ Sbjct 466 RTARAGKSGKSL 477 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 28/61 (46%), Positives = 40/61 (66%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P A+E M + T++QA +IP +L G DVL AA TGSGKT AF IP +++ Sbjct 131 FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVEL 190 Query 64 V 64 + Sbjct 191 L 191 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 8/169 (5%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N +I+ P+RELA Q K+ + +++GG + + Sbjct 191 LSTLRFKPVNGTGVIIISPTRELALQIFGVAKEL---MQGHSQTFGVLMGGANRKAEADK 247 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV+++V TPGR LD L +T ++ LV+DEAD +L G+ + + ++ +P Sbjct 248 LVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLP-- 305 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 S+ ++ + + T D+ ++S + VD E S D + Sbjct 306 -SENRQSMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQ 353 >sp|P0CQ85|HAS1_CRYNB ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=HAS1 PE=3 SV=1 Length=607 Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 43/72 (60%), Gaps = 0/72 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R F L+CTDVAARG+DI V ++I PD+ ++Y+HR+G Sbjct 406 LHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVG 465 Query 605 RVGRAERMGLAI 616 R RA + G ++ Sbjct 466 RTARAGKSGKSL 477 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 28/61 (46%), Positives = 40/61 (66%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P A+E M + T++QA +IP +L G DVL AA TGSGKT AF IP +++ Sbjct 131 FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVEL 190 Query 64 V 64 + Sbjct 191 L 191 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 8/169 (5%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N +I+ P+RELA Q K+ + +++GG + + Sbjct 191 LSTLRFKPVNGTGVIIISPTRELALQIFGVAKEL---MQGHSQTFGVLMGGANRKAEADK 247 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV+++V TPGR LD L +T ++ LV+DEAD +L G+ + + ++ +P Sbjct 248 LVKGVNLIVATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEEEMKQIIKLLP-- 305 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 S+ ++ + + T D+ ++S + VD E S D + Sbjct 306 -SENRQSMLFSATQTTKVTDLARISLRPGPLYINVDETKEASTADMLEQ 353 >sp|O13622|MS116_SCHPO ATP-dependent RNA helicase mss116, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mss116 PE=3 SV=1 Length=535 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 51/99 (52%), Gaps = 1/99 (1%) Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 GG + + C LH +R+ E F+K L TDV ARG+D + V+ + Sbjct 309 GGVLENHLKIPCFILHSGLTTAQRRSITESFRKCQSGILFATDVVARGMDFPNITQVVQI 368 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 T P +Y+HRIGR GRA + G A L+ E+EK + + Sbjct 369 TGPSNTDDYIHRIGRTGRAGKTGEAY-LILLEQEKPFLN 406 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 60/106 (57%), Gaps = 7/106 (7%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA-ARDQLSVLENGVDIVVGTP 347 ++I+ P+RELA Q ++ +K +R IGG + R++ ++ ++++ TP Sbjct 115 SVILSPTRELALQIF---EEARKLTYGTGIRVSYAIGGNSKMREENAIRRGNANLLIATP 171 Query 348 GRLDDLVSTGKL--NLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 GRL+D + ++ +LS F +LDEAD L+ G+++ I +H + Sbjct 172 GRLEDHLQNPRILESLSTDSF-ILDEADRLMDMGFAESILNIHEAV 216 >sp|Q8GXD6|RH49_ARATH DEAD-box ATP-dependent RNA helicase 49 OS=Arabidopsis thaliana OX=3702 GN=RH49 PE=2 SV=2 Length=558 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/124 (32%), Positives = 58/124 (47%), Gaps = 5/124 (4%) Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K V + E+K + ++F T C ++ + + P K F HG Sbjct 252 KSSQLVHLLIENKNKKLVVFFMT---CACVDYWGLVLSKIPTLKSISF--FSTHGKMDQK 306 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 R L F + L+CTDVAARG+DI G+ YV+ P + ++HR+GR R ER Sbjct 307 GRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQ 366 Query 613 GLAI 616 G AI Sbjct 367 GRAI 370 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 35/117 (30%), Positives = 65/117 (56%), Gaps = 4/117 (3%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDI 342 P+ +I+ P+REL+ Q + F + P + +L++GG ++ LE G ++ Sbjct 88 PHQVMGVIISPTRELSAQIHKVAEPFVSTL--PNVNSVLLVGGREVEADMNTLEEEGANL 145 Query 343 VVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 ++GTPGRL D++ + L+ + L+LDEAD LL G+ +N + +++P+ G Sbjct 146 LIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 202 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/66 (38%), Positives = 42/66 (64%), Gaps = 2/66 (3%) Query 1 MAAFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 + FSE+ + +I +A++ + + T +QAE+IP + DV++ A TGSGKT AF + Sbjct 13 LPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLL 72 Query 59 PVIQIV 64 P I+I+ Sbjct 73 PFIEII 78 >sp|Q6CUI6|DBP9_KLULA ATP-dependent RNA helicase DBP9 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP9 PE=3 SV=1 Length=594 Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/154 (28%), Positives = 81/154 (53%), Gaps = 5/154 (3%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A +I+ P+RELA+Q L +++ + L G V+ S+L +I++ Sbjct 91 ATLGVILVPTRELAQQVLEVVEKLIVFCSQEIKCLNLSSGNVSGNLLKSLLTENPEILIA 150 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TP +L DL+ +N+ +++FLV+DE D +L+ GY + + ++ ++P K LQ + Sbjct 151 TPAKLVDLLDAQDVNIDRLKFLVIDEVDLVLTFGYQEDLTKISERLPL----RKSLQTFL 206 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 SATL+ D++ L ++ P + L ++ D Sbjct 207 MSATLND-DIQHLKQQFCRSPAILKLNDDEVNKD 239 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 0/50 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +RG+D V V+N LP ++YVHRIGR RA + G++IS V KE Sbjct 381 VSRGVDFKNVACVLNFDLPTTAKSYVHRIGRTARAGKSGISISFVVPLKE 430 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 27/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPV 60 ++F + ++QA+ + + PT IQ+ +IPL L D++ A TGSGKT A+ IPV Sbjct 15 SSFDSFHLDSRLSQAIRSIGFKHPTLIQSSAIPLALQEKRDIIAKASTGSGKTLAYLIPV 74 Query 61 IQIVYETLKDQQ 72 IQ + + K Q Sbjct 75 IQTILDHKKADQ 86 >sp|Q2UFL0|DBP9_ASPOR ATP-dependent RNA helicase dbp9 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp9 PE=3 SV=1 Length=605 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/161 (32%), Positives = 79/161 (49%), Gaps = 8/161 (5%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A LI+ P+RELAEQ N + F + +R + + V+ Q ++L + D+VV Sbjct 101 ATTGLILVPTRELAEQVQNVVTTFAAFC-GKDVRSVNLTQKVSDAVQRTMLADYPDLVVS 159 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TP R+ + + L+L + LV+DEAD +LS GY + IN + IP + +Q + Sbjct 160 TPARVVTNLGSSALSLENLTHLVIDEADLVLSYGYEEDINALAKAIP------RGVQTFL 213 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 SATL +V L P + L+ +D V VV Sbjct 214 MSATLTD-EVDTLKGLFCRSPVTLKLEDKDDQGAGVSQFVV 253 Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 42/63 (67%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +QA++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 29 FESLNLDPRLRQALIKEKFTKPTLVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 88 Query 64 VYE 66 + + Sbjct 89 ILQ 91 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 29/44 (66%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V V+N LP ++Y HRIGR GRA + G+A+S V Sbjct 380 SRGIDFQNVACVLNFDLPSTSKSYTHRIGRTGRAGKTGMALSFV 423 >sp|Q6H601|RH22_ORYSJ DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0383400 PE=2 SV=2 Length=577 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/113 (34%), Positives = 60/113 (53%), Gaps = 12/113 (11%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK-GD 565 ++ ++F T +D N +Q+ G P C+ H D ER +NL+ F++ G Sbjct 427 NRTMVFTNT-VDAANSVSDILQRVGVP--------CILYHRDSSLEERAKNLQSFRENGG 477 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 V L+CTD AARG+D+ V +VI +++HR+GR RA + G+ SL Sbjct 478 V--LVCTDAAARGLDVPNVSHVIQAEFAACAVDFLHRVGRTARAGQSGIVTSL 528 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 ++ +GV +A A+ P+ +QA IP +L DV++AAETGSGKT + +P+I+ Sbjct 83 SWESLGVSDRLASALHGAGLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLIE 142 >sp|A6SNX1|DBP9_BOTFB ATP-dependent RNA helicase dbp9 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp9 PE=3 SV=2 Length=607 Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 68/124 (55%), Gaps = 7/124 (6%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA+Q ++ F + +R + + V+ Q S+L + DIV+ TP Sbjct 100 ALILVPTRELADQVYKTVESFTAFCAK-DVRAVNLTQRVSDAVQRSLLADSPDIVIATPA 158 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 R +T L+L+ + +V+DEAD +LS GY + + + +P K +Q ++ SA Sbjct 159 RASLNANTSALSLANLTHMVIDEADLVLSYGYDEDLQNVAKIMP------KGVQTVLMSA 212 Query 409 TLHS 412 TL S Sbjct 213 TLTS 216 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 41/61 (67%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+ +G+ + Q + + ++ PT +Q+++IPL L G D+L A+TGSGKT A+ +P++ Sbjct 26 FASLGLDARLLQGIAKQNFQSPTLVQSKAIPLTLEGRDILARAKTGSGKTAAYLLPILHS 85 Query 64 V 64 + Sbjct 86 I 86 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/44 (48%), Positives = 28/44 (64%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V V+N LP ++Y HRIGR RA + G+A+S V Sbjct 386 SRGIDFKNVACVLNFDLPTSSKSYTHRIGRTARAGQTGMALSFV 429 >sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=HAS1 PE=3 SV=1 Length=605 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 0/75 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R F LICTDVAARG+DI V ++I PD+ ++Y+HR+G Sbjct 407 LHGKQKQQKRTNTFFEFINAKQGVLICTDVAARGLDIPKVDWIIQFDPPDDPRDYIHRVG 466 Query 605 RVGRAERMGLAISLV 619 R R G +I + Sbjct 467 RTARGSASGKSIMFL 481 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 41/61 (67%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + Q++++M + T +Q ++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 133 FSTIPLSENTMQSLKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 192 Query 64 V 64 + Sbjct 193 L 193 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/135 (30%), Positives = 66/135 (49%), Gaps = 11/135 (8%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + + KF P N ++V P+RELA Q + + N ++IGG R + Sbjct 193 LRKLKFKPRNGTGVIVVSPTRELALQIYGVARDL---MANHSQTLGIVIGGNNRRQEEEK 249 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV+++V TPGR LD L ++ ++ L++DEAD +L G+ + + +P Sbjct 250 LNKGVNLLVCTPGRLLDHLQNSQGFVFKNLKALIIDEADRILEIGFEQEMKEIIKILP-- 307 Query 395 TSDGKRLQVIVCSAT 409 K Q ++ SAT Sbjct 308 ----KERQSMLFSAT 318 >sp|P26802|DDX51_DROME Probable ATP-dependent RNA helicase Dbp73D OS=Drosophila melanogaster OX=7227 GN=Dbp73D PE=2 SV=3 Length=687 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 48/93 (52%), Gaps = 0/93 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 L G+ R + L F G + LIC+D ARGID+ V V++ P Y+HR+G Sbjct 478 LSGNLSAKVRNERLRDFAAGKINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVG 537 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 R RA R G A++++ + ++ + S KG Sbjct 538 RTARAGRKGTAVTVLTEQDMTLFKKILSDANKG 570 Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/59 (36%), Positives = 36/59 (61%), Gaps = 1/59 (2%) Query 338 NGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 + DIVV TPGRL D L +T L ++FLV+DEAD ++ + +++ + + + + T Sbjct 272 SKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLYHLDSHVKETT 330 Score = 37.7 bits (86), Expect = 0.39, Method: Compositional matrix adjust. Identities = 21/59 (36%), Positives = 34/59 (58%), Gaps = 9/59 (15%) Query 15 QAVEEMDWLLPTDIQAESIPLILGG---------GDVLMAAETGSGKTGAFSIPVIQIV 64 QA+++M +Q + IP IL D+ ++A TGSGKT AF+IP++Q++ Sbjct 150 QALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIPIVQLL 208 >sp|Q4X0C2|DBP9_ASPFU ATP-dependent RNA helicase dbp9 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp9 PE=3 SV=1 Length=649 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/127 (35%), Positives = 69/127 (54%), Gaps = 7/127 (6%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A LI+ P+RELAEQ + I +F + +R + + V+ Q ++L + D++V Sbjct 131 ATTGLILVPTRELAEQVQSVIIKFSAFC-GKDVRSVNLTQKVSDAVQRTMLADYPDLIVS 189 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TP R+ + T L+L + LV+DEAD +LS GY + IN + IP + +Q + Sbjct 190 TPARVIANLGTSALSLENLTHLVIDEADLVLSYGYDEDINALAKAIP------RGVQTFL 243 Query 406 CSATLHS 412 SATL S Sbjct 244 MSATLTS 250 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 42/63 (67%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +Q+++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 59 FESLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 118 Query 64 VYE 66 + + Sbjct 119 ILQ 121 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 29/44 (66%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V V+N LP ++Y HRIGR GRA + G+A+S V Sbjct 425 SRGIDFQNVACVLNFDLPTTSKSYTHRIGRTGRAGKAGMALSFV 468 >sp|P0CR08|SPB4_CRYNJ ATP-dependent rRNA helicase SPB4 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=SPB4 PE=3 SV=1 Length=748 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 123/299 (41%), Gaps = 57/299 (19%) Query 342 IVVGTPGRLDDLVSTGK----LNLSQVRFLVLDEADGLLSQ-GYSDFINRMHNQIPQVTS 396 I++GTPGRL + + + +S++ LVLDEAD LLS + + R+ +P Sbjct 175 ILIGTPGRLAAFLLNPRGLAIVRVSELDVLVLDEADRLLSSPDHRRDVERIMRHLP---- 230 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-----HHVVVPVNPK 451 K+ + + SAT+ D+V + + + V + VN K Sbjct 231 --KQRRTHLFSATM-----------------------TDAVEEMIGLGLRNPVRIVVNLK 265 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 R + G+ A NT E + I++L E +H+ + I+ Sbjct 266 DKR---KDGEEPKERRTPMALQNTYLVCRHAEKTLQLIRLLLCEST-----KHERSKFIV 317 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR---- 567 + T C ++ ++ P +F HG+ P R+ L F Sbjct 318 YFST---CAAVDYFYRILSRLPSLS--KFHLTSFHGELPPKIRETALSTFTSHPSSHLSP 372 Query 568 -FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+CTDVAARG+D + VI P + + + HR GR RA R G A+ L+ +E+ Sbjct 373 AVLLCTDVAARGVDFLDIDVVIQYDAPTDPKTFSHRAGRTARAGRRGKAVVLLGKGREE 431 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 31/52 (60%), Gaps = 0/52 (0%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 P I + M + T +QA +IP + D ++ A TGSGKT AF+IPV++ Sbjct 24 PWILDVINSMGFKNMTPVQAGTIPRAVKNQDCVVEAVTGSGKTLAFTIPVLE 75 >sp|P0CR09|SPB4_CRYNB ATP-dependent rRNA helicase SPB4 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=SPB4 PE=3 SV=1 Length=748 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 123/299 (41%), Gaps = 57/299 (19%) Query 342 IVVGTPGRLDDLVSTGK----LNLSQVRFLVLDEADGLLSQ-GYSDFINRMHNQIPQVTS 396 I++GTPGRL + + + +S++ LVLDEAD LLS + + R+ +P Sbjct 175 ILIGTPGRLAAFLLNPRGLAIVRVSELDVLVLDEADRLLSSPDHRRDVERIMRHLP---- 230 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-----HHVVVPVNPK 451 K+ + + SAT+ D+V + + + V + VN K Sbjct 231 --KQRRTHLFSATM-----------------------TDAVEEMIGLGLRNPVRIVVNLK 265 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 R + G+ A NT E + I++L E +H+ + I+ Sbjct 266 DKR---KDGEEPKERRTPMALQNTYLVCRHAEKTLQLIRLLLCEST-----KHERSKFIV 317 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR---- 567 + T C ++ ++ P +F HG+ P R+ L F Sbjct 318 YFST---CAAVDYFYRILSRLPSLS--KFHLTSFHGELPPKIRETALSTFTSHPSSHLSP 372 Query 568 -FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+CTDVAARG+D + VI P + + + HR GR RA R G A+ L+ +E+ Sbjct 373 AVLLCTDVAARGVDFLDIDVVIQYDAPTDPKTFSHRAGRTARAGRRGKAVVLLGKGREE 431 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 31/52 (60%), Gaps = 0/52 (0%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 P I + M + T +QA +IP + D ++ A TGSGKT AF+IPV++ Sbjct 24 PWILDVINSMGFKNMTPVQAGTIPRAVKNQDCVVEAVTGSGKTLAFTIPVLE 75 >sp|Q4HVW2|SPB4_GIBZE ATP-dependent rRNA helicase SPB4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SPB4 PE=3 SV=1 Length=637 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Query 540 FSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 F+ V LHG R++N +F L+ TD+AARG+DI V V+ + P + + Sbjct 323 FALVPLHGKHAAKVREKNFNKFLSSVSPTILLTTDLAARGLDIPQVDLVVQIDAPSDPKV 382 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 ++HR GR GRA R GLA+ ++ +E+ + R Sbjct 383 FIHRSGRAGRAGRKGLAVVMLHPGREEDYVQFLEIR 418 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 65/134 (49%), Gaps = 24/134 (18%) Query 289 ALIVEPSRELAEQ---TLNNIKQF-----------------KKYIDNPKLRELLIIGGVA 328 A+IV P+RELA Q L + QF + + P + L++GG Sbjct 90 AIIVSPTRELAAQIHTVLMKLLQFHEASAEILPHLKDDDEKRPFTTVPAIVPQLLVGGTT 149 Query 329 A--RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSDFI 384 +D L + ++++ +PGRL +L+S+ ++ Q F LVLDEAD LL G+ + Sbjct 150 TTVQDLRFFLRHSPNVLISSPGRLVELMSSPHVHCPQSSFEVLVLDEADRLLDLGFKPDL 209 Query 385 NRMHNQIPQVTSDG 398 ++ + +P+ G Sbjct 210 QKILSHLPKQRRTG 223 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 I AV M + T +QA ++P +G DV++ A TGSGKT AF IP++Q Sbjct 25 IRDAVATMGFDQMTPVQAATLPHFMGNKDVVVEAVTGSGKTLAFLIPLVQ 74 >sp|Q7SFC8|ROK1_NEUCR ATP-dependent RNA helicase rok1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-16 PE=3 SV=1 Length=781 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/81 (42%), Positives = 42/81 (52%), Gaps = 0/81 (0%) Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH R + + RF+ G+V LI TDV ARG+D GV V+N + Sbjct 570 PLEAGGSARVAVLHSSLPDSVRSKIMARFRSGEVWVLITTDVLARGVDFAGVNGVVNYDV 629 Query 593 PDEKQNYVHRIGRVGRAERMG 613 P YVHR GR GRA R G Sbjct 630 PVSAAAYVHRAGRTGRAGREG 650 Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 22/86 (26%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLIL------------------G 38 + +F E+ G+ P +A + + +PT++Q S+PL L Sbjct 179 LNSFGELKYTYGIHPVLADNITRQGFRVPTEVQMGSLPLQLRPEMALEKATDVEDVKVEK 238 Query 39 GGDVLMAAETGSGKTGAFSIPVIQIV 64 G D L A TGSGKT +F IP I + Sbjct 239 GIDFLGVAPTGSGKTISFLIPAIDAI 264 >sp|A1DHV3|DBP9_NEOFI ATP-dependent RNA helicase dbp9 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp9 PE=3 SV=1 Length=619 Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 43/127 (34%), Positives = 69/127 (54%), Gaps = 7/127 (6%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A L++ P+RELAEQ + I +F + +R + + V+ Q ++L + D++V Sbjct 101 ATTGLVLVPTRELAEQVQSVIIKFSAFC-GKDVRSVNLTQKVSDAVQRTMLADYPDLIVS 159 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TP R+ + T L+L + LV+DEAD +LS GY + IN + IP + +Q + Sbjct 160 TPARVIANLGTSALSLEHLTHLVIDEADLVLSYGYDEDINALAKAIP------RGVQTFL 213 Query 406 CSATLHS 412 SATL S Sbjct 214 MSATLTS 220 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + PT +Q+++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 29 FESLNLDPRLRQALIREQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 88 Query 64 VYE 66 + + Sbjct 89 ILQ 91 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/49 (47%), Positives = 30/49 (61%), Gaps = 0/49 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +RGID V V+N LP ++Y HRIGR GRA + G+A+S V E Sbjct 395 SRGIDFQNVACVLNFDLPTTSKSYTHRIGRTGRAGKAGMALSFVVPADE 443 >sp|Q75AE1|ROK1_EREGS ATP-dependent RNA helicase ROK1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=ROK1 PE=3 SV=1 Length=569 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 38/58 (66%), Gaps = 0/58 (0%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 +H +R +R++ +ERFK GD+ LICTDV ARGID G+ VIN +P Q YVH Sbjct 403 VIHAERTQVQREKIIERFKSGDLWCLICTDVLARGIDFKGINLVINYDVPRSAQAYVH 460 Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 85/161 (53%), Gaps = 16/161 (10%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL---LIIGGVAAR-- 330 QV K + K LI+ P++ELA Q + + + I K R L L+ +AA+ Sbjct 184 QVISDKAVGTGVKGLIISPTKELANQIFDECSKLAQRIFLEKKRPLSVALLSKSLAAKLK 243 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 +Q+ V + DI++ TP RL D+V + L+LS V++L+ DEAD L + + + + + + Sbjct 244 NQI-VSDKKYDIIISTPLRLIDIVKSESLDLSAVKYLIFDEADKLFDKTFVEQTDDILSA 302 Query 391 I--PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 P ++ ++ SATL S V++L++ IM P V Sbjct 303 CSHPNISK-------VLFSATLPS-SVEELAQSIMTDPVRV 335 Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 0/46 (0%) Query 19 EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 E ++ PT IQ E+IP+ L D++ A TGSGKT AF IP++Q V Sbjct 140 ENNFTEPTPIQCEAIPISLQNRDIVACAPTGSGKTLAFLIPLLQQV 185 >sp|A6R2L6|DBP9_AJECN ATP-dependent RNA helicase DBP9 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP9 PE=3 SV=1 Length=625 Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + P + QA+ + + PT IQAE+IPL L G DVL A+TGSGKT A+ +PV+Q Sbjct 25 SFETLKLDPRLLQALTQQKFTKPTPIQAEAIPLALDGKDVLARAKTGSGKTAAYLLPVLQ 84 Query 63 IVYE 66 + + Sbjct 85 SILQ 88 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 42/124 (34%), Positives = 65/124 (52%), Gaps = 7/124 (6%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELAEQ F + +R + + V+ Q S+L + DIVV TP Sbjct 101 ALILVPTRELAEQVHRTAISFSAF-SGKHVRSVNLTQKVSDAVQRSLLADLPDIVVSTPA 159 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 R V++ L+L ++ LV+DEAD +LS GY + + + +P + +Q + SA Sbjct 160 RAVANVNSSALSLERLTHLVIDEADLVLSYGYEEDMQSLAKAVP------RGVQTFLMSA 213 Query 409 TLHS 412 T S Sbjct 214 TFTS 217 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 29/44 (66%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V V+N LP ++Y HRIGR GRA + G+A+S V Sbjct 396 SRGIDFQNVACVLNFDLPTTSKSYTHRIGRTGRAGKTGMALSFV 439 >sp|Q8TFL3|DBP7_CANGA ATP-dependent RNA helicase DBP7 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP7 PE=3 SV=1 Length=715 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 56/183 (31%), Positives = 91/183 (50%), Gaps = 25/183 (14%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDN--PKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 ALI+ P+RELA Q I + N L L+IGG + + + L G + ++GT Sbjct 206 ALIIAPTRELASQ----IYHVTTMLANCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGT 261 Query 347 PGRLDDLVSTGKL----NLSQVRFLVLDEADGLLSQGYSDFINRMH---NQIPQVTSD-- 397 PGR+ D K+ S +R++VLDE D L+ G+ + IN++ N + +T Sbjct 262 PGRILDHFQNTKVIKEQMQSSLRYVVLDEGDKLMELGFEETINQIMEIVNSMDVITRKYP 321 Query 398 --GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-------SVPDTVHHVVVPV 448 R+ ++CSAT ++ +V KLS++ + + + G+ SVPD + VV Sbjct 322 KLPNRIVHLLCSATKNN-EVAKLSKRSLDNYKVISIGGKKDTMMDNTSVPDQLLQKVVIA 380 Query 449 NPK 451 PK Sbjct 381 PPK 383 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/81 (40%), Positives = 41/81 (51%), Gaps = 6/81 (7%) Query 542 CVCLHGDRKPHERKQNLERF------KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 C LHG R L+ F KG L CTDVA+RG+D+ V VI P Sbjct 465 CYKLHGSLSQQMRTMTLKHFATDSEQTKGKHLILFCTDVASRGLDLPDVSTVIEFDPPFA 524 Query 596 KQNYVHRIGRVGRAERMGLAI 616 ++++HRIGR RA R G A+ Sbjct 525 VEDHLHRIGRTARAGRSGEAL 545 >sp|Q54VF1|DDX56_DICDI Probable ATP-dependent RNA helicase ddx56 OS=Dictyostelium discoideum OX=44689 GN=ddx56 PE=3 SV=1 Length=685 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ I +A+++M + P+ +Q++SIPL L G D+L A TGSGKT A+SIP+IQ Sbjct 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQ 83 Query 63 IV 64 V Sbjct 84 KV 85 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/68 (40%), Positives = 36/68 (53%), Gaps = 0/68 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 ARGID V V+N P +NY+HRIGR R G+A+S V E++ V +R Sbjct 427 VARGIDFRNVDIVVNFDFPRTIKNYIHRIGRTARGTNKGIALSFVTYHNEELLKKVSKTR 486 Query 635 GKGCYNTR 642 G YN + Sbjct 487 GDAGYNLK 494 Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 84/152 (55%), Gaps = 11/152 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD-QLSVLENGVDIVVGT 346 KA+++ P+REL EQ N+ Q Y +L ++ +G D Q +L + D++V T Sbjct 98 KAVVLVPTRELCEQVKNHFNQVSYYCQ--QLVSVVQLGNDKTLDEQKGLLRDIPDVIVST 155 Query 347 PGRLDDLVSTGKLNL-SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 P RL + + L S + LV+DEAD +L+ G+ + IN + + +P+V Q + Sbjct 156 PTRLVQHLENKTIQLQSTLDILVIDEADLVLNYGHQNDINIIKSFLPKVC------QCFL 209 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 SATL + +V++L + ++H P + L+ + ++ Sbjct 210 MSATL-TKEVEELKKLVLHTPAVLKLEEDKAI 240 >sp|O60080|DBP9_SCHPO ATP-dependent RNA helicase dbp9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp9 PE=3 SV=1 Length=595 Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 85/157 (54%), Gaps = 8/157 (5%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA+Q N +++ + +R + + + Q +L + DIV+ TP Sbjct 91 ALLLVPTRELAQQVYNVLEKLTAFCSK-HIRFINVATNSSDTVQRPLLLDLPDIVIATPS 149 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 R V++G L L +++FLV+DEAD +LS GY++ + + +P+ T Q + SA Sbjct 150 RCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNEDMKTLSRSLPRGT------QSFLMSA 203 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 TL S ++ L + + P + +K +++ +VV Sbjct 204 TL-SKNIASLQKLVCRNPFILAVKDKEASGKLTQYVV 239 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 29/77 (38%), Positives = 51/77 (66%), Gaps = 5/77 (6%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS+ + P + +A+ + ++ PT +Q+E+IPL L G D++ A TGSGKT A+ IP+++ Sbjct 15 TFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPILE 74 Query 63 IVYETLKDQQ--EGKKG 77 ++ LK +Q E ++G Sbjct 75 LL---LKQKQIDENQRG 88 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 0/50 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ARG+D V V+N +P ++Y+HRIGR RA + G A+S V + E Sbjct 386 VARGLDFENVACVLNFDMPSNTKSYIHRIGRTARAGKPGTAMSFVVPKSE 435 >sp|Q6BLM5|DBP9_DEBHA ATP-dependent RNA helicase DBP9 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP9 PE=3 SV=1 Length=586 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 10/153 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K++I+ P+REL+ Q +++ + N K+R + I ++ + S+L N +I+V TP Sbjct 95 KSIILVPTRELSNQVSQFLEKLLIFC-NSKIRLINISSNLSDQVINSLLINKPEIIVSTP 153 Query 348 GRLDDL----VSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +L + V++ +NLS V+ L +DE D +LS GY + + ++ + +P K LQ Sbjct 154 AKLIQILEKNVNSNLINLSTVKNLTIDEVDLVLSYGYLEDLQKLESYLPI----KKNLQT 209 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 + SAT++ D+ + K P + L EDS Sbjct 210 FLMSATIND-DLNDIKSKFCSRPAILKLNDEDS 241 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 47/76 (62%), Gaps = 4/76 (5%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 G+ + QA++++ + PT IQ+ +IPL I D++ A TGSGKT A+SIP+IQ Sbjct 26 FGLDARLLQAIDQLGFENPTLIQSSAIPLAIEEKRDIIAKASTGSGKTAAYSIPIIQ--- 82 Query 66 ETLKDQQEGKKGKTTI 81 L+D+ ++ K+ I Sbjct 83 NLLQDESTEREIKSII 98 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 0/45 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RG+D V V+N LP ++Y+HR+GR RA + G+A+S V Sbjct 377 VSRGVDFRNVACVLNFDLPTSSKSYIHRVGRTARAGKSGMALSFV 421 >sp|Q09916|HAS1_SCHPO ATP-dependent RNA helicase has1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=has1 PE=1 SV=1 Length=578 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 44/62 (71%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + I +A++EM + T+IQ SIP +L G DVL AA+TGSGKT AF IP I++ Sbjct 91 FSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEM 150 Query 64 VY 65 +Y Sbjct 151 LY 152 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 8/143 (6%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 KF P N +I+ P+RELA Q K+ KY ++IGG R + L G Sbjct 155 KFKPRNGTGVIIISPTRELALQIFGVAKELLKYHHQT---FGIVIGGANRRAEADKLVKG 211 Query 340 VDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 V+++V TPGR LD L +T +R LV+DEAD +L G+ D + ++ +P S+ Sbjct 212 VNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEADRILEIGFEDEMRQIMKILP---SEN 268 Query 399 KRLQVIVCSATLHSFDVKKLSEK 421 ++ + + T D+ ++S K Sbjct 269 RQTLLFSATQTTKVEDLARISLK 291 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 0/67 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K R F + L+CT+VAARG+DI V +++ PD+ ++Y+HR+G Sbjct 366 LHGKQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVG 425 Query 605 RVGRAER 611 R R + Sbjct 426 RTARGTK 432 >sp|A7EM78|DBP9_SCLS1 ATP-dependent RNA helicase dbp9 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp9 PE=3 SV=1 Length=607 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 7/124 (6%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELA+Q ++ F + +R + + V+ Q S+L + DIV+ TP Sbjct 100 ALILVPTRELADQVYKTVESFTAFCAK-DVRAVNLTQRVSDAVQRSLLADSPDIVIATPA 158 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 R +T L L+ + +V+DEAD +LS GY + + + +P K +Q ++ SA Sbjct 159 RASLNANTSALLLTNLTHMVIDEADLVLSYGYDEDLQNVAKIMP------KGVQTVLMSA 212 Query 409 TLHS 412 TL S Sbjct 213 TLTS 216 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/63 (37%), Positives = 42/63 (67%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F+ +G+ + Q + + ++ PT +Q+++IPL L G D+L A+TGSGKT A+ +P++ Sbjct 24 ATFASLGLDARLLQGIAKQNFQSPTLVQSKAIPLTLEGRDILARAKTGSGKTAAYLLPIL 83 Query 62 QIV 64 + Sbjct 84 HSI 86 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/44 (48%), Positives = 28/44 (64%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V V+N LP ++Y HRIGR RA + G+A+S V Sbjct 386 SRGIDFKNVACVLNFDLPTSSKSYTHRIGRTARAGQTGMALSFV 429 >sp|A2QCW6|DBP9_ASPNC ATP-dependent RNA helicase dbp9 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp9 PE=3 SV=1 Length=616 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 43/127 (34%), Positives = 66/127 (52%), Gaps = 7/127 (6%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A LI+ P+RELAEQ + F + +R + + V+ Q ++L + DIV+ Sbjct 101 ATTGLILVPTRELAEQVQKVVTTFAAFC-GKDVRSVNLTQKVSEAVQRTMLSDYPDIVIS 159 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TP R+ + L+L + LV+DEAD +LS GY + IN + IP + +Q + Sbjct 160 TPARVIANLGNSSLSLDNLTHLVIDEADLVLSYGYDEDINALSKAIP------RGVQTFL 213 Query 406 CSATLHS 412 SATL S Sbjct 214 MSATLTS 220 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 0/65 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F + + P + QA+ + + PT +QA++IPL L G D+L A+TGSGKT A+ +P++ Sbjct 27 ADFESLNLDPRLRQALIKEKFTKPTPVQAKAIPLALAGKDILARAKTGSGKTAAYVLPIL 86 Query 62 QIVYE 66 Q + + Sbjct 87 QTILQ 91 Score = 34.7 bits (78), Expect = 3.7, Method: Compositional matrix adjust. Identities = 21/44 (48%), Positives = 28/44 (64%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V V+N LP ++Y HRIGR GR + G+A+S V Sbjct 392 SRGIDFQNVACVLNFDLPTTAKSYTHRIGRTGRGGKTGMALSFV 435 >sp|Q5BGX6|DBP7_EMENI ATP-dependent RNA helicase dbp7 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp7 PE=3 SV=1 Length=778 Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/182 (31%), Positives = 92/182 (51%), Gaps = 36/182 (20%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+I+ P+REL +Q L + + +I +IGG + + + L G++I+V Sbjct 241 AIILAPTRELCKQISVVLEGLLRCAHWIVAG-----TVIGGEKKKSEKARLRKGLNILVA 295 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGY----SDFINRMH-----NQIPQVT 395 TPGRL D L +T L++S VR+LVLDE D L+ G+ + I+++ ++IP V Sbjct 296 TPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEKELQEIISKLDARQRPSRIPGVP 355 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + + I+CSATL +V+KL GE S+ D VH P + ++ Sbjct 356 A---KRATILCSATL-KMNVQKL--------------GEISLKDAVHIKADPADEDGEKT 397 Query 456 WE 457 E Sbjct 398 AE 399 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 37/73 (51%), Gaps = 1/73 (1%) Query 545 LHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 LHG H R L F K D LICTDVA+RG+D+ V V+ ++HRI Sbjct 519 LHGSLPQHVRTSTLSSFAKNRDPSVLICTDVASRGLDLPNVDLVVEYDPAFSADEHLHRI 578 Query 604 GRVGRAERMGLAI 616 GR R R G A+ Sbjct 579 GRTARLGRDGRAL 591 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/81 (35%), Positives = 47/81 (58%), Gaps = 3/81 (4%) Query 4 FSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 F+ +G+ P +A + +++ PT IQ SI +L D + AETGSGKT A+ +P++ Sbjct 153 FTNLGLSPTLAAHLLTKLELKAPTAIQKASITQLLKEETDAFIQAETGSGKTLAYLLPLV 212 Query 62 QIVYETLKDQQEG-KKGKTTI 81 Q + + + EG KG T++ Sbjct 213 QRIMALSRAKNEGDAKGDTSV 233 >sp|Q754J2|DBP7_EREGS ATP-dependent RNA helicase DBP7 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP7 PE=3 SV=1 Length=710 Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 85/181 (47%), Gaps = 24/181 (13%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+IV P+RELA Q ++ + Q Y L L++GG + + + L G + +VG Sbjct 213 AMIVTPTRELAAQIYGVISTLAQCCHY-----LVPCLLVGGERKKSEKARLRKGANFIVG 267 Query 346 TPGRLDDLVSTGKLNLSQ----VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG--- 398 TPGR+ D + K+ Q +R+L+LDE D L+ G+ + + + + V D Sbjct 268 TPGRMLDHLQNTKVAREQLPHSLRYLILDEGDKLMELGFEETLKSILEIVHSVACDNTRF 327 Query 399 ----KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE----DSVPDTVHHVVVPVNP 450 +R+ ++CSAT V KL + + P + +VPD + + V P Sbjct 328 PRLPQRIVHVLCSATRQG-TVSKLGDIALTDPKVIAASDSTTDVSTVPDQLLQKIAIVPP 386 Query 451 K 451 K Sbjct 387 K 387 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 51/109 (47%), Gaps = 7/109 (6%) Query 545 LHGDRKPHERKQNLERFK------KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 LHG R L F +G L CTDVA+RG+D+ V VI + P ++ Sbjct 470 LHGSLPQAVRVATLRHFSSDAAATRGKHLVLFCTDVASRGLDLPRVSTVIEMDPPFAVED 529 Query 599 YVHRIGRVGRAERMGLAIS-LVATEKEKVWYHVCSSRGKGCYNTRLKED 646 ++HRIGR RA G ++ L+ E+E H+ + +G R D Sbjct 530 HLHRIGRTARAGVAGESLLFLLPGEEEGYMEHIRAHHPRGWELLRYDRD 578 Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/41 (51%), Positives = 29/41 (71%), Gaps = 1/41 (2%) Query 25 PTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVIQIV 64 PT IQ +IP +L G D+ + A+TGSGKT AF +PV+Q + Sbjct 158 PTKIQKMAIPEVLNGKADLFLHAQTGSGKTLAFLLPVLQTL 198 >sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=ROK1 PE=3 SV=1 Length=579 Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 37/58 (64%), Gaps = 0/58 (0%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 +H +R +R + +ERFK GD+ LICTDV ARG+D GV VIN +P Q YVH Sbjct 412 VIHAERTQVQRDKIIERFKSGDLWCLICTDVLARGVDFKGVNLVINYDVPRSAQAYVH 469 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 42/146 (29%), Positives = 71/146 (49%), Gaps = 10/146 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS----VLENGVDIV 343 K LI+ P++ELA Q + I K R L + + + E+ DI+ Sbjct 205 KGLIISPTKELANQIFIECSKLANKIYLDKKRPLQVALLSKSLSSKLKNKVISEDKYDII 264 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 + TP RL +V LNL +V+ L+ DEAD L + F+ + + + T L+ Sbjct 265 ISTPLRLITVVQEEALNLGKVKHLIFDEADKLFDKT---FVEQTDDILSSCTD--PHLRK 319 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWV 429 + SAT+ S +V+++++ IM+ P V Sbjct 320 TMFSATIPS-NVEEIAQTIMNDPIRV 344 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/44 (52%), Positives = 32/44 (73%), Gaps = 0/44 (0%) Query 19 EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 E ++ PT IQ+ESIP++L D++ A TGSGKT AF IP++Q Sbjct 150 ENNFTEPTPIQSESIPILLHERDMIACAPTGSGKTLAFLIPLLQ 193 >sp|A1C7F7|DBP9_ASPCL ATP-dependent RNA helicase dbp9 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp9 PE=3 SV=1 Length=621 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 43/127 (34%), Positives = 68/127 (54%), Gaps = 7/127 (6%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A LI+ P+RELAEQ + I +F + +R + + V+ Q ++L + D++V Sbjct 101 ATTGLILVPTRELAEQVQSVITKFTAFC-GKDVRSVNLTQKVSDAVQRTMLADYPDLIVS 159 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TP R+ + + L L + LV+DEAD +LS GY + IN + IP + +Q + Sbjct 160 TPARVIANLGSSALALDNLTHLVIDEADLVLSYGYDEDINALAKAIP------RGVQTFL 213 Query 406 CSATLHS 412 SATL S Sbjct 214 MSATLTS 220 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 42/63 (67%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +Q+++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 29 FENLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 88 Query 64 VYE 66 + + Sbjct 89 ILQ 91 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/49 (47%), Positives = 30/49 (61%), Gaps = 0/49 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +RGID V V+N LP ++Y HRIGR GRA + G+A+S V E Sbjct 397 SRGIDFQNVACVLNFDLPTTSKSYTHRIGRTGRAGKAGMALSFVVPADE 445 >sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP6 PE=3 SV=2 Length=631 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 44/75 (59%), Gaps = 0/75 (0%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + L+ F V L+ TD+ ARGIDI + VIN LP+ ++YVHR+GR RA + G Sbjct 510 RAKILKDFANQTVHILVVTDLIARGIDIATITNVINYDLPNSSRDYVHRVGRTARANQDG 569 Query 614 LAISLVATEKEKVWY 628 A ++ + E W+ Sbjct 570 EAYTMCFGKGETKWF 584 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 10/148 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +A+++ P++ L Q K N L + + ++ D+ L+ DI+V TP Sbjct 273 RAIVLVPTKPLISQVKATFAMLSK---NTNLSVVSLRSDISINDEAQRLQVVPDIIVSTP 329 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI---PQVTSDGK---RL 401 GRL + ++ G +NL +R+LV+DEAD LL+Q + ++ + ++I P D + Sbjct 330 GRLVEHLTNGHINLKSLRYLVIDEADRLLNQSFQNWCETLMSRIDSNPISELDQTWRPSV 389 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWV 429 Q +V SATL + D +LS + P + Sbjct 390 QKLVFSATLTT-DAGRLSMLKLQRPRLI 416 Score = 37.7 bits (86), Expect = 0.40, Method: Compositional matrix adjust. Identities = 22/47 (47%), Positives = 34/47 (72%), Gaps = 4/47 (9%) Query 17 VEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 V + LLP D+++++I P I GGD+L+ A TGSGKT ++IP+I+ Sbjct 219 VSVLKLLLP-DMESQAIRPDI--GGDLLVNAATGSGKTLGYAIPIIE 262 >sp|Q6BH93|HAS1_DEBHA ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=HAS1 PE=3 SV=1 Length=568 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 38/64 (59%), Gaps = 0/64 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R F LICTDVAARG+DI V ++I PD+ ++Y+HR+G Sbjct 381 LHGKQKQQKRTNTFFEFCNATQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVG 440 Query 605 RVGR 608 R R Sbjct 441 RTAR 444 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/62 (47%), Positives = 43/62 (69%), Gaps = 0/62 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E G+ +A+++M + T +QA++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 106 FEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 165 Query 64 VY 65 +Y Sbjct 166 LY 167 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 40/156 (26%), Positives = 78/156 (50%), Gaps = 10/156 (6%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +F P N ++V P+RELA Q ++ + ++IGG R + L G Sbjct 170 RFKPRNGTGVVVVSPTRELALQIFGVARELMAHHSQT---FGIVIGGANRRQEAEKLMKG 226 Query 340 VDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 V++++ TPGR LD L +T V+ LV+DEAD +L G+ + + ++ +P ++ Sbjct 227 VNLLIATPGRLLDHLQNTQGFVFKNVKALVIDEADRILEIGFEEEMKQIIKILP---NED 283 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 ++ + + T D+ ++S + P ++++ E Sbjct 284 RQSMLFSATQTTKVEDLARIS--LRPGPLYINVASE 317 >sp|A5E5F7|MRH4_LODEL ATP-dependent RNA helicase MRH4, mitochondrial OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=MRH4 PE=3 SV=1 Length=603 Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 84/385 (22%), Positives = 149/385 (39%), Gaps = 90/385 (23%) Query 288 KALIVEPSRELAEQTLNNIK--------------QFKKYIDNPKLREL-LIIG----GVA 328 +++I+ P+ EL EQ +K Q+K++++ P+ L L I G A Sbjct 249 RSVILLPTHELVEQVYETLKRANSFLLEYENVPLQYKEFLNLPEHHTLGLSIAKLSHGDA 308 Query 329 ARDQLSVLEN--GVDIVVGTPGRLDDLVSTGKLN-----LSQVRFLVLDEADGLLSQGYS 381 + L N +DI++ TPG++ ++ +R+ V+DEAD L + Sbjct 309 PINVYKQLRNRGKIDILITTPGKITSFSKLESIDRPFKIFKSIRYCVIDEADTLFDDSF- 367 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + + V + K L +I+ SAT +P Sbjct 368 -----LKDTTAVVKNFPKLLDLILVSAT---------------------------IPKEF 395 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR-- 499 ++ + P L R+ + + K T +P S+ + + YA+ Sbjct 396 EKTLLRLFPDQKSLI-RVATPSLHKISKNIKVMTLDADLAPYNGSKTRCLAQAIYAISKD 454 Query 500 AIKEHKMDQAIIFCRTKIDCDNL-----EQYFIQQGGGPDKKGHQFSCVC-LHGDRKPHE 553 + + + + IIF K + D L +Y I++ +C + G + Sbjct 455 GTEHNHVKRIIIFVNEKAEVDGLVDLLQSKYHIRRED-----------ICGISGSVNVGD 503 Query 554 RKQNLERFKK-----------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 RK LE F K ++ L+ TD+ ARG++ G+ VI + LP VHR Sbjct 504 RKDYLEPFLKPAQLLEDDVDQSKIKILVTTDLLARGMNFIGIKNVILMGLPKSSVELVHR 563 Query 603 IGRVGRAERMGLAISLVATEKEKVW 627 +GR GR ++G +V + K W Sbjct 564 LGRTGRMNQLGRVFIIVDKKSRKSW 588 >sp|Q8K363|DDX18_MOUSE ATP-dependent RNA helicase DDX18 OS=Mus musculus OX=10090 GN=Ddx18 PE=1 SV=1 Length=660 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 26/69 (38%), Positives = 41/69 (59%), Gaps = 0/69 (0%) Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 + +HG +K ++R +F D L+CTDVAARG+DI V +++ PD+ + Y Sbjct 440 LPVLAIHGKQKQNKRTTTFFQFCNADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEY 499 Query 600 VHRIGRVGR 608 +HR+GR R Sbjct 500 IHRVGRTAR 508 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/135 (33%), Positives = 73/135 (54%), Gaps = 11/135 (8%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + + KF+P N LI+ P+RELA QT +K+ + + LI+GG ++ Sbjct 231 IVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVH---TYGLIMGGSNRSAEVQK 287 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L NG++I+V TPGR LD + +T ++ LV+DEAD +L G+ + + ++ +P Sbjct 288 LLNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPA- 346 Query 395 TSDGKRLQVIVCSAT 409 R Q ++ SAT Sbjct 347 -----RRQTMLFSAT 356 Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 0/50 (0%) Query 15 QAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 +A+EEM + T+IQ +SI +L G D+L AA+TGSGKT AF IPVI+++ Sbjct 182 KAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELI 231 >sp|Q4IBS2|MAK5_GIBZE ATP-dependent RNA helicase MAK5 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=MAK5 PE=3 SV=2 Length=781 Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/79 (41%), Positives = 43/79 (54%), Gaps = 0/79 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LH R ++LERF LI TDVAARG+DI V V++ +P Y+HR G Sbjct 536 LHSQMAQKARHRSLERFTASRNSILIATDVAARGLDIKEVDQVLHYHVPRSADTYIHRSG 595 Query 605 RVGRAERMGLAISLVATEK 623 R R E G+++ L A E+ Sbjct 596 RTARGESSGISVILCAPEE 614 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 27/62 (44%), Positives = 43/62 (69%), Gaps = 0/62 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAA+ + + P+I A+ ++ ++ PT IQ +IP I+ G DV+ A+TGSGKT AF IP+ Sbjct 214 MAAWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPEIVAGHDVIGKAQTGSGKTLAFGIPM 273 Query 61 IQ 62 ++ Sbjct 274 VE 275 Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 37/113 (33%), Positives = 62/113 (55%), Gaps = 9/113 (8%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +L++ P+RELA+Q +++K + + ++ GG++ Q LE DIV+GT Sbjct 290 PMSLVLSPTRELAKQLGDHLKALCDGLPSAPY-VCVVTGGLSILKQQRQLEK-ADIVIGT 347 Query 347 PGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGY----SDFINRMHNQIP 392 PGRL +++S + +++RFLV+DEAD L G D I + + P Sbjct 348 PGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFKVGQFKEAEDIIGALDGKSP 400 >sp|A7TPC9|DBP9_VANPO ATP-dependent RNA helicase DBP9 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP9 PE=3 SV=2 Length=597 Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 43/152 (28%), Positives = 83/152 (55%), Gaps = 8/152 (5%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 +I+ P+RELA+Q + + + Y N +R L I + + S+L +I++ TPG+ Sbjct 100 IILVPTRELAQQVNDVLDKMILYCSN-DIRSLNISSDMPSSVLTSLLLEKPEIIIATPGK 158 Query 350 LDDLVSTG--KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 L L+ T ++L +++FLV+DE D +L+ GY + ++++ +P K LQ + S Sbjct 159 LMTLLDTNVESVSLEELKFLVIDEVDLVLTFGYKEDLSKIAEYLPL----KKNLQTFLMS 214 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 ATL+ D+++L ++ P + ++ D Sbjct 215 ATLND-DIQELKKEFCRAPAILKFNDDEISKD 245 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 0/50 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +RG+D V V+N LP ++YVHRIGR RA + G AIS V KE Sbjct 384 VSRGVDFQNVACVLNFDLPTTAKSYVHRIGRTARAGKTGTAISFVVPLKE 433 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/65 (37%), Positives = 38/65 (58%), Gaps = 1/65 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVI 61 +F + + + QA++ + PT IQ+ +IPL L D++ A TG GKT A+ IPVI Sbjct 18 SFESLQLDTRLLQAIKRNGFKNPTLIQSHAIPLALQEKRDIIAKAATGCGKTLAYLIPVI 77 Query 62 QIVYE 66 Q + + Sbjct 78 QTILD 82 >sp|Q1DWF4|DBP9_COCIM ATP-dependent RNA helicase DBP9 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP9 PE=3 SV=2 Length=612 Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 7/124 (6%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 ALI+ P+RELAEQ N + F + +R + V+ Q ++L + DI++ TP Sbjct 100 ALILVPTRELAEQVQNAVVSFSSFCGK-DIRSANLTQKVSDAVQRAILADLPDIIISTPA 158 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 R ++ L+L+ + LV+DEAD +LS GY + + IP + +Q ++ SA Sbjct 159 RAIINTNSSSLSLNDLTHLVIDEADLVLSYGYEQDMQNLAKAIP------RGVQTLLMSA 212 Query 409 TLHS 412 TL S Sbjct 213 TLTS 216 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 27/63 (43%), Positives = 43/63 (68%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +QAE+IPL+L G DVL A+TGSGKT A+ +P++Q Sbjct 25 FETLHLDPRLLQALTKQKFTKPTLVQAEAIPLVLSGKDVLARAKTGSGKTAAYLLPILQS 84 Query 64 VYE 66 + + Sbjct 85 ILQ 87 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 0/44 (0%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RGID V V+N LP ++Y HRIGR GRA + G+A+SL+ Sbjct 387 SRGIDFQDVACVLNFDLPTTAKSYTHRIGRTGRAGKTGMALSLI 430 >sp|Q9NVP1|DDX18_HUMAN ATP-dependent RNA helicase DDX18 OS=Homo sapiens OX=9606 GN=DDX18 PE=1 SV=2 Length=670 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 26/67 (39%), Positives = 41/67 (61%), Gaps = 0/67 (0%) Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 + +HG +K ++R +F D L+CTDVAARG+DI V +++ PD+ + Y+H Sbjct 452 VLAIHGKQKQNKRTTTFFQFCNADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIH 511 Query 602 RIGRVGR 608 R+GR R Sbjct 512 RVGRTAR 518 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/135 (32%), Positives = 72/135 (53%), Gaps = 11/135 (8%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + + +F+P N LI+ P+RELA QT +K+ + + LI+GG + Sbjct 241 IVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYG---LIMGGSNRSAEAQK 297 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L NG++I+V TPGR LD + +T ++ LV+DEAD +L G+ + + ++ +P Sbjct 298 LGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPT- 356 Query 395 TSDGKRLQVIVCSAT 409 R Q ++ SAT Sbjct 357 -----RRQTMLFSAT 366 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 0/50 (0%) Query 15 QAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 +A++EM + T+IQ +SI +L G D+L AA+TGSGKT AF IP ++++ Sbjct 192 KAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELI 241 >sp|Q59ZH9|MAK5_CANAL ATP-dependent RNA helicase MAK5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MAK5 PE=3 SV=2 Length=782 Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/141 (33%), Positives = 72/141 (51%), Gaps = 7/141 (5%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P +I P+RELA Q ++++ + KY + I GG++ + Q +L +G I+V Sbjct 276 NHPTGIIFAPTRELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIV 335 Query 345 GTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI----PQVTSD 397 TPGR+ +LV S L+ + +VLDEAD LL G+ D ++ P+ S Sbjct 336 ATPGRMLELVQGDSELAKRLASIDIIVLDEADRLLQDGHFDEFEKILELFGKNRPKSKSI 395 Query 398 GKRLQVIVCSATLHSFDVKKL 418 + Q +V SAT +KL Sbjct 396 EWKWQTLVFSATFSRDLFRKL 416 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/137 (28%), Positives = 66/137 (48%), Gaps = 12/137 (9%) Query 542 CVCLHGDRKPHERKQNLERFK----KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 +H +R + LE+FK K +V L+ +DVAARG+DI + +V++ LP Sbjct 514 AFSIHSSMIQKQRLRALEKFKEASQKNEVAVLVASDVAARGLDIPNIDHVVHYHLPRSAD 573 Query 598 NYVHRIGRVGRAERMGLAISLVATEK-----EKVWYHVCSSRGKGCYNTRLKEDGGCTIW 652 Y+HR GR RA + G+++ + ++ K+ V G +RL + Sbjct 574 VYIHRSGRTARAGKEGVSVMFCSPQEASGPLRKLRRLVA---GNSNKESRLNMHNDVKLL 630 Query 653 YNEMQLLSEIEEHLNCT 669 EM L+S+I+ + + Sbjct 631 PIEMDLVSQIKPRVEIS 647 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 40/62 (65%), Gaps = 0/62 (0%) Query 17 VEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKK 76 + ++D+ PT IQ E+IP+ L G DV+ A TGSGKT A+ IP+++ ++L ++ K Sbjct 212 LSQLDFKKPTPIQKETIPIALSGKDVIGKATTGSGKTLAYGIPILEKYIQSLNLIKQNNK 271 Query 77 GK 78 K Sbjct 272 DK 273 >sp|Q5AK59|HAS1_CANAL ATP-dependent RNA helicase HAS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=HAS1 PE=3 SV=1 Length=565 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 26/64 (41%), Positives = 38/64 (59%), Gaps = 0/64 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R F L+CTDVAARG+DI V +++ PD+ ++Y+HR+G Sbjct 384 LHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVG 443 Query 605 RVGR 608 R R Sbjct 444 RTAR 447 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 78/153 (51%), Gaps = 8/153 (5%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N +I+ P+RELA Q ++ ++ ++IGG R + + L GV+++V Sbjct 179 NGTAVIIITPTRELALQIFGVARELMQFHSQTCG---IVIGGADRRQEATKLAKGVNLLV 235 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + + S ++ LV+DEAD +L G+ D + ++ +P ++ ++ + Sbjct 236 ATPGRLLDHLKNTQFVFSNLKALVIDEADRILEIGFEDEMKQIIKVLP---NENRQSMLF 292 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 + T D+ ++S + P ++++ E V Sbjct 293 SATQTTKVEDLARIS--LRPGPLYINVVPEKDV 323 Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/51 (53%), Positives = 39/51 (76%), Gaps = 0/51 (0%) Query 15 QAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 +A++EM + T +QA++IP +L G DVL AA+TGSGKT AF IP I+++Y Sbjct 121 KAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLY 171 >sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis (strain RS) OX=246410 GN=HAS1 PE=3 SV=1 Length=604 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 38/64 (59%), Gaps = 0/64 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R F LICTDVAARG+DI V ++I PD+ ++Y+HR+G Sbjct 401 LHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVG 460 Query 605 RVGR 608 R R Sbjct 461 RTAR 464 Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 8/163 (5%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N ++V P+RELA Q ++ + ++IGG R + Sbjct 186 LSALRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYG---IVIGGANRRAEAEK 242 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV++++ TPGR LD L +T ++ LV+DEAD +L G+ D + ++ +P Sbjct 243 LTKGVNLLIATPGRLLDHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVKILP-- 300 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 S+ ++ + + T D+ ++S + VD + E S Sbjct 301 -SEDRQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHST 342 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 42/61 (69%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + + +A++EM + T+IQ IP ++ G DVL AA+TGSGKT +F IP +++ Sbjct 126 FTELNLSEKTLKAIQEMGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEM 185 Query 64 V 64 + Sbjct 186 L 186 >sp|Q4P6N0|HAS1_USTMA ATP-dependent RNA helicase HAS1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=HAS1 PE=3 SV=2 Length=574 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 1/79 (1%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R + L+CTDVAARG+DI V ++I PD+ ++Y+HR+G Sbjct 327 LHGKQKQQKRTNTFFEYCNAPCGTLLCTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVG 386 Query 605 RVGRAERMGLA-ISLVATE 622 R RA G + + L+ TE Sbjct 387 RTARAGNSGKSLLFLLPTE 405 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 74/143 (52%), Gaps = 8/143 (6%) Query 279 QTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + KF P N A+I+ P+RELA Q K+ + +I+GG R + L+ Sbjct 114 RLKFKPRNGTGAIIISPTRELALQIFGVAKELMAHHHQT---FGIIMGGANRRAEADKLQ 170 Query 338 NGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 GV+++V TPGR LD L +T S ++ L +DEAD +L G+ D + ++ +P + Sbjct 171 KGVNLIVATPGRLLDHLQNTKGFVFSNLKALCIDEADRILEIGFEDEMRQIVKILP---N 227 Query 397 DGKRLQVIVCSATLHSFDVKKLS 419 D ++ + + T D+ ++S Sbjct 228 DNRQSMLFSATQTTKVQDLARIS 250 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 41/63 (65%), Gaps = 0/63 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + +A++ M + T++QA IP ++ G DVL AA+TGSGKT +F IP I++ Sbjct 52 FSILDLSEPTRKAIDAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEM 111 Query 64 VYE 66 ++ Sbjct 112 LHR 114 >sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=HAS1 PE=3 SV=2 Length=591 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 38/64 (59%), Gaps = 0/64 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R F LICTDVAARG+DI V ++I PD+ ++Y+HR+G Sbjct 391 LHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVG 450 Query 605 RVGR 608 R R Sbjct 451 RTAR 454 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/62 (47%), Positives = 41/62 (66%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+ + + +A+ EM + T+IQ IP L G DVL AA+TGSGKT AF IPVI+ Sbjct 116 SFEELKLSEKTMKAINEMKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIE 175 Query 63 IV 64 ++ Sbjct 176 ML 177 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/134 (28%), Positives = 67/134 (50%), Gaps = 9/134 (7%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N ++V P+RELA Q ++ + ++IGG R + Sbjct 177 LSSLRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTYG---IVIGGANRRAEAEK 233 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++++ TPGRL D + ++ LV+DEAD +L G+ D + ++ +P+ Sbjct 234 LAKGVNLLIATPGRLLDHLQNTPFVFKNLKSLVIDEADRILEIGFEDEMRQIIKVLPK-- 291 Query 396 SDGKRLQVIVCSAT 409 + Q ++ SAT Sbjct 292 ---EDRQTMLFSAT 302 >sp|Q4WQM4|HAS1_ASPFU ATP-dependent RNA helicase has1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=has1 PE=3 SV=2 Length=622 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 38/64 (59%), Gaps = 0/64 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R F LICTDVAARG+DI V ++I PD+ ++Y+HR+G Sbjct 417 LHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVG 476 Query 605 RVGR 608 R R Sbjct 477 RTAR 480 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (5%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N ++V P+RELA Q ++ +Y ++IGG R + Sbjct 202 LSALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYG---IVIGGANRRAEAEK 258 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV++++ TPGR LD L +T ++ LV+DEAD +L G+ D + ++ +P Sbjct 259 LMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVKILP-- 316 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 S+ ++ + + T D+ ++S + VD + E S Sbjct 317 -SEERQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHST 358 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 43/61 (70%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G+ + +A+ +M + T+IQ +IP +L G DVL AA+TGSGKT +F IP +++ Sbjct 142 FTELGLSEKTLKAINDMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEM 201 Query 64 V 64 + Sbjct 202 L 202 >sp|Q0UHM7|DBP7_PHANO ATP-dependent RNA helicase DBP7 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP7 PE=3 SV=1 Length=831 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 45/141 (32%), Positives = 74/141 (52%), Gaps = 12/141 (9%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 A+I+ P+REL++Q +++ L +IGG + + + L G++I+V TPG Sbjct 273 AIIMAPTRELSKQIALVLEKLLGCAH--WLVATTVIGGEKKKSEKARLRKGINILVATPG 330 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN--------RMHNQIPQVTSDGK 399 RL D L T L++S VR+LVLDE D L+ G+ I RM ++ Sbjct 331 RLADHLEHTEALDVSNVRWLVLDEGDRLMELGFEQEIQKIVGALNLRMRGNKTRIPGLPD 390 Query 400 RLQVIVCSATLHSFDVKKLSE 420 + ++CSAT+ DV++L + Sbjct 391 KRTTVLCSATM-KMDVERLGQ 410 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 42/81 (52%), Gaps = 1/81 (1%) Query 536 KGHQFSCVCLHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 K H + LHG + R L F K D LI TDVA+RG+D+ V V+ Sbjct 552 KSHAVTAYRLHGSLQQSLRTSTLAHFTKNNDAAVLIATDVASRGLDLPNVDLVVEFDPAF 611 Query 595 EKQNYVHRIGRVGRAERMGLA 615 +++++HRIGR RA R G A Sbjct 612 AREDHLHRIGRTARAGRDGRA 632 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 24/65 (37%), Positives = 39/65 (60%), Gaps = 2/65 (3%) Query 4 FSEMGVMPEIA-QAVEEMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIPVI 61 F+ +G+ +A +++MD PT IQ +I L+ D + AETGSGKT A+ +P++ Sbjct 187 FTSLGISTTLAAHLLKKMDLKAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPIV 246 Query 62 QIVYE 66 Q + E Sbjct 247 QRLME 251 >sp|A1CW14|HAS1_NEOFI ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=has1 PE=3 SV=1 Length=622 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 28/64 (44%), Positives = 38/64 (59%), Gaps = 0/64 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG +K +R F LICTDVAARG+DI V ++I PD+ ++Y+HR+G Sbjct 417 LHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVG 476 Query 605 RVGR 608 R R Sbjct 477 RTAR 480 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (5%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ +F P N ++V P+RELA Q ++ +Y ++IGG R + Sbjct 202 LSALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTYG---IVIGGANRRAEAEK 258 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV++++ TPGR LD L +T ++ LV+DEAD +L G+ D + ++ +P Sbjct 259 LMKGVNLLIATPGRLLDHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQIVKILP-- 316 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 S+ ++ + + T D+ ++S + VD + E S Sbjct 317 -SEERQTMLFSATQTTKVEDLARISLRPGPLYINVDHRKEHST 358 Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 43/61 (70%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G+ + +A+ +M + T+IQ +IP +L G DVL AA+TGSGKT +F IP +++ Sbjct 142 FTELGLTEKTLKAINDMGFDTMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEM 201 Query 64 V 64 + Sbjct 202 L 202 >sp|Q6BV58|MAK5_DEBHA ATP-dependent RNA helicase MAK5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=MAK5 PE=3 SV=1 Length=790 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 73/144 (51%), Gaps = 8/144 (6%) Query 275 AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 A+ Q+K + N P +I P+RELA Q ++++ + K+ + + I GG++ + Q Sbjct 266 AKANQSKKVINPPTGIIFAPTRELAHQVVDHLNRIAKFTPLSQHGIVSITGGLSIQKQER 325 Query 335 VLENGVDIVVGTPGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSD-FINRMHNQ 390 +L +G IVV TPGR +L+ LS +VLDEAD LL G+ D F+ + Sbjct 326 LLSHGPGIVVATPGRFLELLQKDMALVQRLSCTDIVVLDEADRLLQDGHFDEFVKILELF 385 Query 391 IPQVTSDGKRL----QVIVCSATL 410 D K L Q +V SAT Sbjct 386 GKHRPRDNKELEWKWQTLVFSATF 409 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/129 (33%), Positives = 64/129 (50%), Gaps = 12/129 (9%) Query 544 CLHGDRKPHERKQNLERFK----KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 +H +R + LERFK K LI +DVAARG+DI + +V + LP Y Sbjct 523 SIHSSMIQKQRLRTLERFKEASSKNSTAVLIASDVAARGLDIPNIDHVAHYHLPRSADVY 582 Query 600 VHRIGRVGRAERMGLAISLVATEK-----EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 +HR GR GRA + G++I + ++ K+ V ++ K TRL + Sbjct 583 IHRSGRTGRAGKEGVSIMFCSPQESSGPLRKLRKLVANNTKK---RTRLNVHNDVKLLPL 639 Query 655 EMQLLSEIE 663 EM L+S+I+ Sbjct 640 EMDLVSQIK 648 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/57 (39%), Positives = 35/57 (61%), Gaps = 0/57 (0%) Query 20 MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKK 76 +++ PT IQ +IPL + G DV+ A TGSGKT A+ IP+++ + + + KK Sbjct 217 LEYEKPTAIQKRTIPLAIEGKDVIGKAITGSGKTLAYGIPILERHLQKMAKANQSKK 273 >sp|Q6BV94|MRH4_DEBHA ATP-dependent RNA helicase MRH4, mitochondrial OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=MRH4 PE=3 SV=1 Length=593 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 83/389 (21%), Positives = 159/389 (41%), Gaps = 92/389 (24%) Query 288 KALIVEPSRELAEQTLNNIKQF------------KKYIDNPKLRELLIIGGVAARDQLSV 335 +++I+ P+ EL EQ +++K+ KK + +P+ L + L+V Sbjct 233 RSVILLPTHELVEQVYDSLKRASKASIDLEASVNKKILQDPQYARYLSLPENQTSLNLNV 292 Query 336 LENG---------------VDIVVGTPGRLDDLVSTGKLN-----LSQVRFLVLDEADGL 375 ++ G +D++V TP ++ L ++ + V + V+DEAD L Sbjct 293 VKWGSGDSHQKLFDAGRKRIDVLVTTPAKIQGLAKLNNVSRPFRLFNFVEYCVVDEADTL 352 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQ----VIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 + + + I TS +RL +I CSAT+ + KK K+ Sbjct 353 MDKSW----------IVDTTSVIRRLSKCKDLIFCSATIPK-EFKKTLGKMF-------- 393 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 PD + + V P ++ +++ +++ D SP S+ + Sbjct 394 ------PDEFSIINI-VTPSLHKIPKQI---NLKVIDAQL---------SPYNGSKTRCL 434 Query 492 LKGEYAVR--AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 + YA+ ++ + + ++F K D L I++ G ++ + + G Sbjct 435 AQALYAIHNDGTEQGYVKRILVFVNEKRDVQPLADTLIEKFGHREE-----DIIGITGAD 489 Query 550 KPHERKQNLERFKK-----------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 +R +E F K V+ LI TD+ ARG++ +G+ VI + LP+ + Sbjct 490 NADDRLAKIEPFLKPAELLEEDLDGSKVKVLITTDLLARGLNFNGIKNVILMDLPNTSVD 549 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVW 627 VHR+GR GR + G ++ + K W Sbjct 550 LVHRVGRTGRMRQSGRVFVIIDKKTGKSW 578 >sp|Q2UE66|DBP7_ASPOR ATP-dependent RNA helicase dbp7 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp7 PE=3 SV=1 Length=760 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 88/174 (51%), Gaps = 36/174 (21%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+++ P+REL +Q L ++ + +I +IGG + + + L G++I+V Sbjct 228 AIVLAPTRELCKQISVVLESLLRCAHWI-----VAGTVIGGEKKKSEKARLRKGLNILVA 282 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD----FINRMH-----NQIPQVT 395 TPGRL D L +T L++S VR+LVLDE D L+ G+ I ++ ++IP + Sbjct 283 TPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEKELQGIIQKLDARQRPSRIPGIP 342 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + + I+CSATL +V+KL GE S+ D VH P + Sbjct 343 T---KRTTILCSATL-KMNVQKL--------------GEISLKDAVHIKADPAD 378 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query 545 LHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 LHG H R L F ++ + L+CTDVA+RG+D+ V VI ++ HRI Sbjct 502 LHGSLPQHVRTATLNAFSREREPSVLVCTDVASRGLDLPNVDLVIEYDPAFSADDHTHRI 561 Query 604 GRVGRAERMGLAI 616 GR R R G A+ Sbjct 562 GRTARLGRDGRAL 574 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%) Query 1 MAAFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSI 58 + F+ +G+ P +A + +++ PT IQ S+ +L D + AETGSGKT A+ + Sbjct 136 LDTFTNLGLSPSLAAHLLTKLELKAPTGIQKASMSQLLKEDSDAFIQAETGSGKTLAYLL 195 Query 59 PVIQIV 64 P++Q + Sbjct 196 PLVQRI 201 >sp|Q0UZ59|DBP9_PHANO ATP-dependent RNA helicase DBP9 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP9 PE=3 SV=1 Length=597 Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 53/81 (65%), Gaps = 8/81 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +A+F+E+ + P + + + + W PT +Q+++IPL L G D+L + TG+GKTGA+ +P Sbjct 46 VASFAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARSGTGTGKTGAYLLP- 104 Query 61 IQIVYETLKDQQEGKKGKTTI 81 I++ TL +KGKT++ Sbjct 105 --ILHNTLL-----RKGKTSL 118 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/174 (25%), Positives = 82/174 (47%), Gaps = 16/174 (9%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV- 335 + L +LI+ P++ELA Q K + + + I +A ++ V Sbjct 105 ILHNTLLRKGKTSLILVPTKELALQITKVAKALSAHCG-----QAVRIQNIAGKESEVVT 159 Query 336 ---LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 L + DIV+ TP R ++TG L ++++ LV+DE D ++ G+ + ++++ IP Sbjct 160 KAKLADNPDIVIATPARASANINTGALAVTELAHLVVDEGDLVMGYGFKEDLDQIAQNIP 219 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 K +Q+ + SATL++ +V+ L + + P + L D V V+ Sbjct 220 ------KGVQMFLMSATLNT-EVESLGSLLCNDPVVLKLDDLDKDSKRVKQYVI 266 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 35/65 (54%), Gaps = 2/65 (3%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 +RGID V V+N P ++Y HRIGR RA + G AIS + K+K H ++ Sbjct 378 SRGIDFLNVSCVLNFDFPATYKSYFHRIGRTARAGKSGTAISFI-IPKDKYRKHKSTTFA 436 Query 636 KGCYN 640 GC N Sbjct 437 -GCEN 440 >sp|Q751D1|DBP6_EREGS ATP-dependent RNA helicase DBP6 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP6 PE=3 SV=1 Length=607 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 27/65 (42%), Positives = 40/65 (62%), Gaps = 0/65 (0%) Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G L+ TD+ +RG+DI G+ +VIN LP Q YVHR GR RA G A++L+ + Sbjct 491 GHCSILVSTDLMSRGLDISGISHVINYDLPISSQQYVHRCGRTARANTSGTAVNLLVGKG 550 Query 624 EKVWY 628 E+ ++ Sbjct 551 EQNFW 555 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/153 (27%), Positives = 77/153 (50%), Gaps = 23/153 (15%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV---- 340 N +A+I+ P++ L Q + ++ K ++ V+ D S+ E Sbjct 245 NKLRAVILVPTKLLVHQVYDTVQALAKGSS--------VVVAVSKMDT-SLKEESAKLKA 295 Query 341 ---DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS----DFINRMHNQIPQ 393 D+++ TPGRL D ++ +L ++FLVLDEAD LL+Q + + + R++ + P Sbjct 296 QEPDVLIITPGRLVDHLNMQTFSLKNLKFLVLDEADRLLNQSFQNWCIELMTRLNAERP- 354 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 G +++I SATL + + ++L + +H P Sbjct 355 FKGPGNVIKMIF-SATL-TTNTERLHDLQLHNP 385 >sp|A5DPU0|MAK5_PICGU ATP-dependent RNA helicase MAK5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=MAK5 PE=3 SV=1 Length=754 Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/135 (30%), Positives = 66/135 (49%), Gaps = 12/135 (9%) Query 544 CLHGDRKPHERKQNLERFK----KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 +H +R + LERFK K LI +DVAARG+DI + +V + LP Y Sbjct 500 SIHSSMIQKQRLRALERFKAAGEKNQTAVLIASDVAARGLDIPNIDHVAHYHLPRSADVY 559 Query 600 VHRIGRVGRAERMGLAISLVATEK-----EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 VHR GR RA + G+++ + ++ K+ V S KG +R+ + Sbjct 560 VHRSGRTARAGKEGVSVMFCSPQEASGPFRKLRKLVADSANKG---SRMNMHSDVKLLPI 616 Query 655 EMQLLSEIEEHLNCT 669 EM L+++++ +N + Sbjct 617 EMDLVTQLKPRVNIS 631 Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 45/141 (32%), Positives = 75/141 (53%), Gaps = 8/141 (6%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I P+RELA Q ++++ + K+ + + I GG++ + Q +L +G I+V T Sbjct 260 PTAMIFAPTRELAHQVVDHMNKIAKFSPLAQNGIVSITGGLSIQKQERLLSHGPSILVAT 319 Query 347 PGRLDDLV--STGKLN-LSQVRFLVLDEADGLLSQG----YSDFINRMHNQIPQVTSD-G 398 PGR +L+ S +N ++ +VLDEAD LL G + ++ ++ P+ T Sbjct 320 PGRCLELMEKSVDLVNRMALTDMIVLDEADRLLQDGHFEEFEKILDMLNKHRPKKTQGVS 379 Query 399 KRLQVIVCSATLHSFDVKKLS 419 +R Q +V SAT KLS Sbjct 380 RRWQTLVFSATFSRDLFGKLS 400 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 34/57 (60%), Gaps = 0/57 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTI 81 PT IQ ++IPL L G DV+ A TGSGKT A+ IP+++ L+ + K T + Sbjct 207 PTAIQRKAIPLALQGKDVIGKATTGSGKTLAYGIPILERCLAQLESKTNTIKPPTAM 263 >sp|A4QTR1|DBP9_PYRO7 ATP-dependent RNA helicase DBP9 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP9 PE=3 SV=1 Length=636 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/90 (38%), Positives = 54/90 (60%), Gaps = 11/90 (12%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 ++G+ P + QAV + + PT +Q+++IPL L G DVL A+TGSGKT A+ +P++Q V Sbjct 47 DLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPILQAV- 105 Query 66 ETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 LK +Q I GA+ ++ + P Sbjct 106 --LKRKQ--------INPGATYISSLILVP 125 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 48/162 (30%), Positives = 84/162 (52%), Gaps = 15/162 (9%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG---GVAARDQLSVLENGV-DIVV 344 +LI+ P+REL Q +++F + +E+ ++G V+ Q S+L++ DIVV Sbjct 120 SLILVPTRELTVQVTKEVERFSAFC----AKEVQVVGLTDKVSDAVQRSLLQSSSPDIVV 175 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP V +G L+L ++ LVLDEAD +LS GY + + ++ +P K +Q + Sbjct 176 STPSTAWRNVDSGALSLDKLTHLVLDEADLVLSYGYDEDLEKVARGLP------KGVQTV 229 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + SATL ++ L + P +DL+ D+ + +V Sbjct 230 MTSATLTD-EIDTLKGIFLRDPVLLDLEEPDAEGSEITQYIV 270 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (2%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 +RGID V V+N LP +Y HRIGR GRA + G+ +S KE H+ +S Sbjct 411 SRGIDFKNVAVVVNFDLPLSSTSYTHRIGRTGRAGQAGMVLSFYVP-KELFRKHIPTS 467 >sp|Q9LIH9|RH51_ARATH DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana OX=3702 GN=RH51 PE=2 SV=1 Length=568 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/153 (31%), Positives = 79/153 (52%), Gaps = 12/153 (8%) Query 281 KFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +F P N +++ P+RELA QT N ++ K+ ++IGG R + + +G Sbjct 155 RFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQT---VSMVIGGNNRRSEAQRIASG 211 Query 340 VDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 ++V+ TPGR LD L +T ++ LV+DEAD +L + + + +N++ +P Sbjct 212 SNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILP------ 265 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 K Q + SAT S VK L+ + P VD+ Sbjct 266 KTRQTALFSATQTS-KVKDLARVSLTSPVHVDV 297 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 27/66 (41%), Positives = 37/66 (56%), Gaps = 0/66 (0%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +HG + R + F K L+CTDVAARG+DI V ++I PD+ Y+HR+G Sbjct 364 IHGGMDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVG 423 Query 605 RVGRAE 610 R R E Sbjct 424 RTARGE 429 Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + + + A++EM + T IQA SI +L G DVL AA TGSGKT AF IP ++ Sbjct 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149 Query 63 IVYE 66 ++++ Sbjct 150 LLFK 153 >sp|A6ZSB3|DBP6_YEAS7 ATP-dependent RNA helicase DBP6 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP6 PE=3 SV=1 Length=629 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 0/63 (0%) Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + LI TD+ +RGIDI+ + VIN P Q YVHR+GR RA +G A +L+ E+ Sbjct 519 ITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGER 578 Query 626 VWY 628 ++ Sbjct 579 TFF 581 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 19/40 (48%), Positives = 30/40 (75%), Gaps = 0/40 (0%) Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 DI++ TPGRL D ++ +NL ++FL++DEAD LL+Q + Sbjct 312 DILITTPGRLVDHLNMKSINLKNLKFLIIDEADRLLNQSF 351 Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust. Identities = 15/27 (56%), Positives = 23/27 (85%), Gaps = 0/27 (0%) Query 40 GDVLMAAETGSGKTGAFSIPVIQIVYE 66 GD+L+ A TGSGKT A+SIP++Q +++ Sbjct 228 GDILVNAATGSGKTLAYSIPIVQTLFK 254 >sp|P53734|DBP6_YEAST ATP-dependent RNA helicase DBP6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP6 PE=1 SV=1 Length=629 Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 0/63 (0%) Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + LI TD+ +RGIDI+ + VIN P Q YVHR+GR RA +G A +L+ E+ Sbjct 519 ITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGER 578 Query 626 VWY 628 ++ Sbjct 579 TFF 581 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 19/40 (48%), Positives = 30/40 (75%), Gaps = 0/40 (0%) Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 DI++ TPGRL D ++ +NL ++FL++DEAD LL+Q + Sbjct 312 DILITTPGRLVDHLNMKSINLKNLKFLIIDEADRLLNQSF 351 Score = 39.3 bits (90), Expect = 0.13, Method: Compositional matrix adjust. Identities = 15/27 (56%), Positives = 23/27 (85%), Gaps = 0/27 (0%) Query 40 GDVLMAAETGSGKTGAFSIPVIQIVYE 66 GD+L+ A TGSGKT A+SIP++Q +++ Sbjct 228 GDILVNAATGSGKTLAYSIPIVQTLFK 254 >sp|A3LV40|DBP9_PICST ATP-dependent RNA helicase DBP9 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP9 PE=3 SV=1 Length=581 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 81/153 (53%), Gaps = 10/153 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K++I+ P+REL+ Q L +++ Y +N ++ + + ++ + S+L N +I++ TP Sbjct 92 KSIILVPTRELSNQVLQFVEKLLVYSNN-RINAINLSANLSDQVVNSLLMNKPEIIISTP 150 Query 348 GRLDDLVSTGK----LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +L ++ ++LS VR L +DE D +LS GY + + ++ +P K LQ Sbjct 151 AKLIQVLEKNANKDLIDLSTVRNLTIDEVDLVLSYGYLEDLQKLETYLPI----KKNLQT 206 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 + SAT++ D+ L + P + L E+S Sbjct 207 FLMSATVND-DLNDLKTRFCSRPAILKLNDEES 238 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVI 61 + QA++++ + PT IQA +IPL L D++ A TGSGKTGA+ IP+I Sbjct 26 LVQAIDQLGFEHPTLIQASAIPLALEEKRDIIAKASTGSGKTGAYVIPII 75 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 0/50 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +RG+D V V+N LP + Y+HRIGR RA + G+A+S V KE Sbjct 371 VSRGVDFRNVACVLNFDLPTTSKAYIHRIGRTARAGKAGMALSFVLPIKE 420 >sp|P75335|Y443_MYCPN Probable ATP-dependent RNA helicase MG308 homolog OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=MPN_443 PE=3 SV=1 Length=409 Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/110 (32%), Positives = 46/110 (42%), Gaps = 9/110 (8%) Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 H +Q ++FC L +Q S LHG P+ERK Sbjct 214 HHNEQVLVFCSNAKSLKQLTSLLAH---------NQLSFKSLHGQLTPNERKHIFTSAAN 264 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 VR L+ +D+ ARGID+ VI+ LP Y+HR GRV R G Sbjct 265 NTVRVLVVSDLLARGIDLPHFSVVISWDLPLVDSFYIHRSGRVARFNSWG 314 >sp|Q4P9E5|SPB4_USTMA ATP-dependent rRNA helicase SPB4 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SPB4 PE=3 SV=2 Length=767 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/98 (34%), Positives = 48/98 (49%), Gaps = 8/98 (8%) Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDV--------RFLICTDVAARGIDIHGVPYV 587 + H+ LHG + P +RK + F L CTDVAARG+D+ V V Sbjct 375 RQHRVKLYALHGKQTPSKRKSMFDTFVASTALDSGASGASVLFCTDVAARGLDLPDVDVV 434 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + P + + + HR GR RA R G AI ++ T +E+ Sbjct 435 VQYDPPTDPKVFSHRCGRTARAGRNGRAIVMLHTGREQ 472 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 30/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (4%) Query 322 LIIGG---VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 L++GG D + ++G DI+VGTPGRL++L+S + S + LVLDEAD LL Sbjct 188 LVVGGSKCTPLDDYRQLRDSGADILVGTPGRLEELLSKKGVKKSSLEVLVLDEADRLLDL 247 Query 379 GYSDFINRMHNQIPQVTSDG 398 G+++ + R+ + +P+ G Sbjct 248 GFTENLRRILSLLPKQRRTG 267 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 0/39 (0%) Query 26 TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 T +QA +IPL + DV++ A TGSGKT AF IPV++++ Sbjct 52 TPVQASTIPLFVSHKDVVVEAVTGSGKTLAFVIPVLEML 90 >sp|A2RA55|DBP7_ASPNC ATP-dependent RNA helicase dbp7 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp7 PE=3 SV=1 Length=771 Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 36/174 (21%) Query 289 ALIVEPSRELAEQ---TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+++ P+REL +Q L + + +I +IGG + + + L G++I+V Sbjct 234 AIVLAPTRELCKQIAVVLEGLLRCAHWIVAG-----TVIGGEKKKSEKARLRKGLNILVA 288 Query 346 TPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGY----SDFINRMH-----NQIPQVT 395 TPGRL D L +T L++S VR+LVLDE D L+ G+ + I ++ ++IP + Sbjct 289 TPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEKELAGIIQKLDARQRPSRIPGIP 348 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + + I+CSATL V+KL GE S+ D VH P + Sbjct 349 A---KRTTILCSATL-KMTVQKL--------------GEISLKDAVHIQADPAD 384 Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%) Query 545 LHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 LHG H R L F + + LICTDVA+RG+D+ V V+ ++++HRI Sbjct 509 LHGSLPQHVRTATLGAFARNREPSVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRI 568 Query 604 GRVGRAERMGLAI 616 GR R R G A+ Sbjct 569 GRTARLGRDGRAL 581 Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 2/77 (3%) Query 4 FSEMGV-MPEIAQAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 F+ +G+ P A + +++ PT IQ SI +L D + AETGSGKT A+ +P++ Sbjct 148 FTNLGLSAPLAAHLLTKLEVKAPTAIQKASITQLLKEESDAFIQAETGSGKTMAYLLPLV 207 Query 62 QIVYETLKDQQEGKKGK 78 Q + +Q++ ++G+ Sbjct 208 QRIMTISLNQKKREEGE 224 >sp|Q0DWT8|RH1_ORYSJ DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0795900 PE=2 SV=1 Length=521 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 1/114 (1%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R++ L+ FK+G + LI TD ARGI I G+ YVIN +P + Y+HR GR RA G Sbjct 382 RRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESG 441 Query 614 LAISLVATEKEKVWYHVC-SSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL 666 + + + K + + + C L E+ T+ L ++EE L Sbjct 442 SCFTFLRKHEVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSALKKLEESL 495 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/49 (41%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query 337 ENGVDIVVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFI 384 + VDI+V TPGRL D +S K +L +++LV+DE D +L + Y ++ Sbjct 179 QTKVDILVATPGRLMDHISMTKGFSLEHLQYLVVDETDRMLREAYQSWL 227 >sp|A6RCJ9|MRH4_AJECN ATP-dependent RNA helicase MRH4, mitochondrial OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=MRH4 PE=3 SV=1 Length=624 Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 44/127 (35%), Positives = 62/127 (49%), Gaps = 12/127 (9%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+A+I+ P+ EL EQ KQ K R I R + L N G+DI++ Sbjct 292 PRAIILVPTAELVEQVGKLAKQLSHTA---KFRSATISSVYTPRRITNSLFNPAGIDILI 348 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI-NRMHNQIPQVTSDGKRLQV 403 TP L + T LS+V LV+DEAD LL + +S + M P +T Q+ Sbjct 349 STPHLLTSIAKTNPYILSRVAHLVIDEADSLLDKSFSPLTYSIMEKTAPSLT------QL 402 Query 404 IVCSATL 410 I+CSAT+ Sbjct 403 ILCSATI 409 >sp|Q944S1|RH22_ARATH DEAD-box ATP-dependent RNA helicase 22 OS=Arabidopsis thaliana OX=3702 GN=RH22 PE=2 SV=1 Length=581 Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 91/386 (24%), Positives = 142/386 (37%), Gaps = 80/386 (21%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 +LI+ P+ L EQ + + NP LR + G D+L DI+V TP Sbjct 165 SLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVCGSQGWPDRLP------DIIVSTPA 218 Query 349 RLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSD----FINRMHNQIPQVTS---- 396 L + + + L V+++V DEAD LL + + IN + QV+ Sbjct 219 ALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSFQNQIIRLINMLRFDEKQVSRLAKS 278 Query 397 --------DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 D Q+ + + FD +SE+ L +P V Sbjct 279 NLGRPMEIDASVPQIDLENEDDAEFDEGSISEEEDEEEEEEYLDDIAQMPS----VEAEA 334 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRP--------------------------GANSP 482 T + W R+ K + R+ T P NSP Sbjct 335 GSDTKKGWRRVRKIYTRSKQYIFIAATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSP 394 Query 483 EM---WSEAIKILKGEYAVRAIKEHKM---DQAIIFCRT----KIDCDNLEQYFIQQGGG 532 + W E + + + A+K + ++ ++F T + D LE+ IQ Sbjct 395 RLKQKWVEVTVDSQVDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQ---- 450 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 C H + K ER L F++ F +CTD AARG+D+ V +VI Sbjct 451 ---------CYRYHKNHKLDERANILADFRETGGVF-VCTDAAARGVDVPNVSHVIQADF 500 Query 593 PDEKQNYVHRIGRVGRAERMGLAISL 618 +++HRIGR RA + G SL Sbjct 501 ASSAVDFLHRIGRTARAGQYGTVTSL 526 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/70 (36%), Positives = 41/70 (59%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 ++ +G+ ++ A+ + + P+ QA IP IL G DV++AAETGSGKT + P+I Sbjct 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIID 140 Query 63 IVYETLKDQQ 72 + T D + Sbjct 141 QLTNTALDSE 150 >sp|Q9VD51|DDX18_DROME Probable ATP-dependent RNA helicase pitchoune OS=Drosophila melanogaster OX=7227 GN=pit PE=2 SV=2 Length=680 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 0/67 (0%) Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 +HG +K +R +F + L+CTDVAARG+DI V +++ PD+ + Y+H Sbjct 460 VTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPREYIH 519 Query 602 RIGRVGR 608 R+GR R Sbjct 520 RVGRTAR 526 Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/135 (29%), Positives = 73/135 (54%), Gaps = 11/135 (8%) Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + + +F+P N +I+ P+REL+ QT +K+ + + L++GG + + Sbjct 249 INKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHT---YGLVMGGSNRQVESEK 305 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L G++I+V TPGR LD L ++ ++ L++DE D +L G+ + + ++ N +P Sbjct 306 LGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLP-- 363 Query 395 TSDGKRLQVIVCSAT 409 KR Q ++ SAT Sbjct 364 ----KRRQTMLFSAT 374 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 38/50 (76%), Gaps = 0/50 (0%) Query 15 QAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 +A++EM + T+IQ++S+ +L G D++ AA+TGSGKT AF IP ++++ Sbjct 200 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELI 249 >sp|A3GG51|MAK5_PICST ATP-dependent RNA helicase MAK5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=MAK5 PE=3 SV=2 Length=836 Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 68/145 (47%), Gaps = 12/145 (8%) Query 542 CVCLHGDRKPHERKQNLERFKKG----DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 +H +R + LERF+K D LI +DVAARG+DI + +V + LP Sbjct 544 AFAIHSSMIQKQRLRALERFQKASEKNDTAVLIASDVAARGLDIPNIDHVAHYHLPRSAD 603 Query 598 NYVHRIGRVGRAERMGLAISLVATEK-----EKVWYHVCSSRGKGCYNTRLKEDGGCTIW 652 Y+HR GR RA + G+++ + ++ K+ V ++ KG RL + Sbjct 604 VYIHRSGRTARAGKEGVSVMFCSPQEASGPLRKLRRLVANNSTKGG---RLNMHNDVKLL 660 Query 653 YNEMQLLSEIEEHLNCTISQVEPDI 677 EM L+S+++ + + DI Sbjct 661 PIEMDLVSQLKPRVIIASKLADADI 685 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 8/142 (6%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 Q Q K + N P +I P+RELA Q ++++ KY + I GG++ + Q + Sbjct 293 QNRQKKII-NHPTGIIFAPTRELAHQVVSHLNSLAKYSPLSTNGIVSITGGLSIQKQERL 351 Query 336 LENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQG----YSDFINRMH 388 L +G I+V TPGR+ +L+ + L+ +VLDEAD LL G + ++ Sbjct 352 LSHGPGIIVATPGRILELLQKDEDLTKRLASTDIIVLDEADRLLQDGHFEEFETILDLFR 411 Query 389 NQIPQVTSDGKRLQVIVCSATL 410 P+ + + Q +V SAT Sbjct 412 KNRPKNKTFPWKWQTLVFSATF 433 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/38 (53%), Positives = 27/38 (71%), Gaps = 0/38 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 PT IQ ++IPL G DV+ A TGSGKT A+ IP+++ Sbjct 245 PTPIQKKTIPLAAEGKDVVGKAITGSGKTLAYGIPILE 282 >sp|Q6CN92|SPB4_KLULA ATP-dependent rRNA helicase SPB4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=SPB4 PE=3 SV=1 Length=596 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 72/142 (51%), Gaps = 11/142 (8%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI-DNP-KLRELLIIGGVAA--RD 331 + KF + +LI+ P+RELA Q + I+ F KY DN +R L++G +A RD Sbjct 73 EANSAKFKKSHFHSLIISPTRELASQIHDVIEDFLKYYPDNLYPIRSQLLVGTSSASVRD 132 Query 332 QL-SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 + S +N I+VGTPGR+ D + + + +VLDEAD LL + + + Sbjct 133 DINSFTDNRPQILVGTPGRVLDFLQKTNVKTASCGTVVLDEADKLLDLNFQKDVETILKM 192 Query 391 IPQVTSDGKRLQVIVCSATLHS 412 +P+ G + SAT+ S Sbjct 193 LPKQRRTG------LFSATIES 208 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/83 (39%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Query 544 CLHGDRKPHERKQNLERFKKGDV-RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 LHG + R + L+ F L TDVAARGIDI V VI + P + ++HR Sbjct 298 SLHGKLQTQSRMKTLDSFTSNLTDAVLFTTDVAARGIDIPDVDLVIQLDPPTDADIFIHR 357 Query 603 IGRVGRAERMGLAISLVATEKEK 625 GR GRA R+G A+ + +E+ Sbjct 358 CGRTGRANRIGKALVFLNEGREE 380 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 35/54 (65%), Gaps = 0/54 (0%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + P I A+E M + T +QA +IPL G DV++ + TGSGKT AF IP+++ Sbjct 14 IQPWIRTAIESMGFETMTPVQASTIPLFSGNKDVVVESVTGSGKTIAFVIPILE 67 >sp|Q0JFN7|RH58_ORYSJ DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0970600 PE=2 SV=2 Length=438 Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 77/349 (22%), Positives = 140/349 (40%), Gaps = 61/349 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII-GGVAARDQLSVLENGVDIVVGT 346 +AL+V P+REL Q + + + + + ++ GG+ R + V I+V T Sbjct 111 QALVVVPTRELGMQ----VTKVARILAAKACTVMALLDGGMLRRQKSWVKAEPPAIIVAT 166 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 L ++ +L +R LV+DE D + G S ++ + + ++ R Q I Sbjct 167 VASLCQMIEKRAFSLQSMRVLVIDEVDFIF--GSSKQVSSLRKILTSYSAASSR-QTIFA 223 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG------ 460 SA++ + + + + + H W D VH V PV P L + Sbjct 224 SASIPQHN-RFVHDCVQH--KWTK-------TDVVHVHVNPVQPMPSHLQHKYAICSKKE 273 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE-HKMDQAII--FCRTKI 517 + H+ + KD + G I E + ++ K H ++ F RT Sbjct 274 RLHVLLSLLE-KDAPKSGI-----------IFVAEQSEKSKKAGHPPSTTVVVEFLRTTY 321 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 +LE +++ + + F+ V KG L+ TD+A+R Sbjct 322 -MGSLEVLLLEEDMNFNARATSFTEV-------------------KGKGFLLVSTDIASR 361 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA--ERMGLAISLVATEKE 624 G D+ ++ N LP +Y+HR GR GR ++ +++ + TE E Sbjct 362 GFDLPQTSHIYNFDLPKTAIDYLHRAGRTGREPFSKLACSVTTLITEDE 410 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 23/58 (40%), Positives = 41/58 (71%), Gaps = 1/58 (2%) Query 8 GVMPE-IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 G +PE + Q EE+ +++PT++Q +S+P++L G D ++ A+TGSGKT A+ + V + Sbjct 46 GRVPEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAI 103 >sp|Q7RZH4|MAK5_NEUCR ATP-dependent RNA helicase mak-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mak-5 PE=3 SV=1 Length=805 Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/84 (38%), Positives = 51/84 (61%), Gaps = 3/84 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M+ + + + P + ++ ++ + PT IQ+++IP I+ G DV+ A TGSGKT AF IPV Sbjct 208 MSEWVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEIMAGHDVIGKASTGSGKTLAFGIPV 267 Query 61 IQ---IVYETLKDQQEGKKGKTTI 81 I+ ET K +E +KG T + Sbjct 268 IESWLSAAETRKQNKEERKGATAL 291 Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 8/82 (10%) Query 545 LHGDRKPHERKQNLERFK--------KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 LH R ++++RFK G L+ TDVAARG+DI V VI+ +P Sbjct 550 LHSGMIQQARLRSIDRFKANEGAKKKNGSAAILVATDVAARGLDIPDVDLVIHYHVPRAA 609 Query 597 QNYVHRIGRVGRAERMGLAISL 618 ++YVHR GR RA G +I L Sbjct 610 EDYVHRSGRTARASNSGTSILL 631 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 7/119 (6%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN-PKLRELLII 324 +++S S Q K ALI+ P+RELA+Q ++++ K + P + ++ Sbjct 267 VIESWLSAAETRKQNKEERKGATALILSPTRELAQQIRDHLQALCKGLPTAPYI--CSVL 324 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR---FLVLDEADGLLSQGY 380 GG+A + Q L+ DIV+ TPGR+ +++S+ L+ +R FLVLDEAD LL G+ Sbjct 325 GGMAVQKQKRQLQVA-DIVIATPGRMWEVMSSDNSVLASLRNISFLVLDEADRLLKDGH 382 >sp|B0LPN4|RYR2_RAT Ryanodine receptor 2 OS=Rattus norvegicus OX=10116 GN=Ryr2 PE=1 SV=2 Length=4953 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 12/193 (6%) Query 62 QIVYETLKDQQEGKKGKTTIKTGASVL--NKWQMNPYDRGSAFAIGSDGLCCQSREVKEW 119 ++V TL D + K K +++ L + + D+ A +C + E Sbjct 1024 RLVPYTLLDDRTKKSNKDSLREAVRTLLGYGYHLEAPDQDHA---SRAEVCSGTGERFRI 1080 Query 120 HGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNK 177 T + G+ Y+E G RVGWS Q L+LG+D+ F F G + ++ Sbjct 1081 FRAEKTYAVKAGRWYFEFEAVTAGDMRVGWSRPGCQPDLELGSDERAFAFDGFKAQRWHQ 1140 Query 178 QFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQALFPACVL 233 ++YG + D +GC +D+++ + F+ NG+ D G P C L Sbjct 1141 GNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSL 1200 Query 234 KNAEL-KFNFGEE 245 A++ + NFG++ Sbjct 1201 GVAQVGRMNFGKD 1213 >sp|Q61R02|DDX55_CAEBR Probable ATP-dependent RNA helicase DDX55 homolog OS=Caenorhabditis briggsae OX=6238 GN=CBG06798 PE=3 SV=1 Length=577 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/127 (31%), Positives = 64/127 (50%), Gaps = 8/127 (6%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + + PN ALI+ PSREL Q +N IK F + + KL + GG + + Sbjct 71 IQNARLQPNEIGALILSPSRELCSQIVNVIKPFAEKM---KLNVETVTGGQKVDKNIKMF 127 Query 337 EN-GVDIVVGTPGRLDDLVSTGKLNLSQ----VRFLVLDEADGLLSQGYSDFINRMHNQI 391 +N ++I+V TPGRL ++ K +++ V+ LV+DEAD + D + + + I Sbjct 128 KNKDINILVATPGRLFQIIQHEKTMIARAMKGVQLLVIDEADRFNEIQFEDHMREILSCI 187 Query 392 PQVTSDG 398 P+ G Sbjct 188 PKQRRTG 194 Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 PH R ++ F + +I TDV ARGIDI + +VI LP +VHR GR R Sbjct 296 PH-RAAQIKAFSESTNGVMISTDVMARGIDITDIDWVIQYDLPKHSSWFVHRAGRTARCG 354 Query 611 RMGLAISLVATEK 623 R G A+ L+ATE+ Sbjct 355 RDGNALILIATEQ 367 Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 34/54 (63%), Gaps = 1/54 (2%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 PEI + ++ + TD+Q + +L DV++ + TGSGKT AF +P+++++ Sbjct 19 PEILEVFDK-SYKSFTDVQVLAGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMI 71 >sp|P73421|RECQ_SYNY3 ATP-dependent DNA helicase RecQ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=recQ PE=3 SV=1 Length=478 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/137 (25%), Positives = 65/137 (47%), Gaps = 14/137 (10%) Query 489 IKILKGEYAVRA-----IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 +K++ EY R + +H + +I+ RT+ NL Q+ ++G F Sbjct 217 VKMVLSEYCRRQQLRRFLLKHLQESGLIYVRTRTMAINLAQWLQERG---------FDSE 267 Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 HG PH+R+Q +++ G + ++CT+ GID +V++ P +Y+ + Sbjct 268 AYHGGLGPHQRRQLEQKWLTGQISSVVCTNAFGLGIDKPDTRWVLHYQAPLMLMDYLQEV 327 Query 604 GRVGRAERMGLAISLVA 620 GR GR + ++LV+ Sbjct 328 GRAGRDLQPAECLTLVS 344 >sp|Q3E9C3|RH58_ARATH DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH58 PE=2 SV=1 Length=472 Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 83/353 (24%), Positives = 136/353 (39%), Gaps = 55/353 (16%) Query 288 KALIVEPSRELAEQTLNNIKQF--KKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVV 344 +A+IV P+REL Q + K ID + ++ G R S L+ I+V Sbjct 146 QAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILV 205 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 T L ++ + VR LV+DE D L S + + + +S KR Q + Sbjct 206 ATVASLCHMLEKHIFRIDSVRVLVVDEVDFLFYS--SKQVGSVRKLLTSFSSCDKR-QTV 262 Query 405 VCSATL--HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 SA++ H V ++ W D VH V + P L R Sbjct 263 FASASIPQHKHFVHDCIQQ-----KWTK-------RDVVHVHVSAIMPMPLCLLHRFVMC 310 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC-----RTKI 517 K N K + + ++ + AIIF ++K Sbjct 311 E--------KTN------------------KHQVLLALLESDAPESAIIFVGEQSEKSKK 344 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 ++ + + KG + L GD + R +L ++G L+ TD+AAR Sbjct 345 AGNDPSTTLLMEFLKTSYKG-SLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAAR 403 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGR---AERMGLAISLVATEKEKVW 627 GID+ ++ N LP +Y+HR GR GR ++R + +L+ +E+ V Sbjct 404 GIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEERFVL 456 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 22/58 (38%), Positives = 38/58 (66%), Gaps = 1/58 (2%) Query 8 GVMPE-IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 G +PE I +EE+ ++ PTDIQ E++P + G D ++ A+TGSGKT + + + ++ Sbjct 81 GFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLI 138 >sp|A5DUB2|MAK5_LODEL ATP-dependent RNA helicase MAK5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=MAK5 PE=3 SV=1 Length=855 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 8/129 (6%) Query 542 CVCLHGDRKPHERKQNLERFK----KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 +H +R ++LERFK K L+ +DVAARG+DI + +V + LP Sbjct 551 AFAIHSSMIQKQRLRSLERFKDASEKNQTAVLVASDVAARGLDIPNIDHVAHYHLPRSAD 610 Query 598 NYVHRIGRVGRAERMGLAISLVATEKE----KVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 Y+HR GR RA + G+++ + ++ + + +S N ++ + Sbjct 611 VYIHRSGRTARAGKEGVSVMFCSPQEASGPLRKLRKLVASNAANNKNQKINVHSDVKLLP 670 Query 654 NEMQLLSEI 662 EM L+S++ Sbjct 671 VEMDLVSQL 679 Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 53/99 (54%), Gaps = 3/99 (3%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P +I P+RELA Q ++++ + +Y + + GG++ + Q +L G I+V Sbjct 298 NHPTGIIFAPTRELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSIQKQERLLSFGPGIIV 357 Query 345 GTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGY 380 TPGR+ +L + LS +VLDEAD LL G+ Sbjct 358 ATPGRMLELCQNDQELVKRLSMTDIIVLDEADRLLQDGH 396 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/63 (41%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 E + P I + M + PT IQ +IPL L G DV+ A TGSGKT A+ IP+++ Sbjct 223 ETCLSPYILNGLSNMKFTTPTPIQKRTIPLALEGKDVIGKATTGSGKTLAYGIPILEKYI 282 Query 66 ETL 68 ++L Sbjct 283 QSL 285 >sp|E9Q401|RYR2_MOUSE Ryanodine receptor 2 OS=Mus musculus OX=10090 GN=Ryr2 PE=1 SV=1 Length=4966 Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 12/193 (6%) Query 62 QIVYETLKDQQEGKKGKTTIKTGASVL--NKWQMNPYDRGSAFAIGSDGLCCQSREVKEW 119 ++V TL D + K K +++ L + + D+ A +C + E Sbjct 1031 RLVPYTLLDDRTKKSNKDSLREAVRTLLGYGYHLEAPDQDHA---SRAEVCSGTGERFRI 1087 Query 120 HGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNK 177 T + G+ Y+E G RVGWS Q L+LG+D F F G + ++ Sbjct 1088 FRAEKTYAVKAGRWYFEFEAVTAGDMRVGWSRPGCQPDLELGSDDRAFAFDGFKAQRWHQ 1147 Query 178 QFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQALFPACVL 233 ++YG + D +GC +D+++ + F+ NG+ D G P C L Sbjct 1148 GNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSL 1207 Query 234 KNAEL-KFNFGEE 245 A++ + NFG++ Sbjct 1208 GVAQVGRMNFGKD 1220 >sp|P30957|RYR2_RABIT Ryanodine receptor 2 OS=Oryctolagus cuniculus OX=9986 GN=RYR2 PE=1 SV=3 Length=4969 Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 82/191 (43%), Gaps = 8/191 (4%) Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 ++V TL D + K K +++ L + N A ++ +C + E Sbjct 1031 RLVPYTLLDDRTKKSNKDSLREAVRTLLGYGYNLEAPDQDHAARAE-VCSGTGERFRIFR 1089 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQF 179 T + G+ Y+E G RVGWS Q +LG+D+ F F G + ++ Sbjct 1090 AEKTYAVKAGRWYFEFEAVTSGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGN 1149 Query 180 DNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQALFPACVLKN 235 ++YG + D +GC +D+++ + F+ NG+ D G P C L Sbjct 1150 EHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGV 1209 Query 236 AEL-KFNFGEE 245 A++ + NFG++ Sbjct 1210 AQVGRMNFGKD 1220 >sp|Q6FUA6|DBP9_CANGA ATP-dependent RNA helicase DBP9 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP9 PE=3 SV=1 Length=595 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 38/148 (26%), Positives = 80/148 (54%), Gaps = 8/148 (5%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 +I+ P+REL +Q +++ Y + ++ L + ++ ++L +I+VGTP + Sbjct 95 IIMVPTRELTQQVTAVLEKLIHYC-SKDIKVLNLAADLSTSVLNTLLSENPEIIVGTPSK 153 Query 350 LDDLV--STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 + +++ +T + + ++FLV+DE D +L+ GY D ++++ +P K LQ + S Sbjct 154 ILNILERNTDTVGIDDLKFLVIDEVDLVLTFGYQDDLDKIAEYLPL----KKNLQTFLMS 209 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGED 435 ATL S D++ L +K P + ++ Sbjct 210 ATL-SDDIQSLKQKYCRSPAIIKFNDDE 236 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 0/50 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +RG+D V V+N LP + YVHR+GR RA + G AIS V KE Sbjct 384 VSRGVDFKNVACVVNFDLPTTAKAYVHRVGRTARAGKSGTAISFVVPLKE 433 Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/72 (38%), Positives = 40/72 (56%), Gaps = 1/72 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVIQ 62 F + + QA++ + PT IQ+ +IPL L D++ A TGSGKT A+ IPVIQ Sbjct 16 FESFKLDARLLQAIKGSGFTHPTLIQSHAIPLALEEKRDIIAKAATGSGKTLAYLIPVIQ 75 Query 63 IVYETLKDQQEG 74 + + K + G Sbjct 76 TILDYKKSRTNG 87 >sp|Q5A4P9|DBP9_CANAL ATP-dependent RNA helicase DBP9 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP9 PE=3 SV=2 Length=574 Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 44/151 (29%), Positives = 80/151 (53%), Gaps = 9/151 (6%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K++I+ P+REL+ Q +++ + N K+ L + + + S+L N +I++ TP Sbjct 87 KSIILVPTRELSNQVFQFVEKLLTFSTN-KINVLNLSSSYSDQVLNSLLVNKPEIIISTP 145 Query 348 GRLDDLVSTGKLN--LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 +L ++ + N LS V+ L +DE D +LS GY D + ++ + +P K LQ + Sbjct 146 AKLIQILEKNEKNIDLSTVKNLTIDEVDLVLSFGYLDDLKKLESYLPV----KKNLQTFL 201 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 SAT++ D+ L ++ P + L EDS Sbjct 202 MSATVND-DLDDLKQRYCTKPAILKL-NEDS 230 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 0/45 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +RG+D V V+N LP + Y+HRIGR RA + G+A+S V Sbjct 365 VSRGVDFRNVACVLNFDLPTSSKAYIHRIGRTARAGKAGMALSFV 409 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (2%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVI 61 P + QA++++ + PT IQ+ +IPL L D++ A TGSGKT A+ IP++ Sbjct 23 PRLLQAIDQLGFSNPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPIV 74 >sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens OX=9606 GN=RYR2 PE=1 SV=3 Length=4967 Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 46/191 (24%), Positives = 82/191 (43%), Gaps = 8/191 (4%) Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 ++V TL D + K K +++ L + N A ++ +C + E Sbjct 1031 RLVPYTLLDDRTKKSNKDSLREAVRTLLGYGYNLEAPDQDHAARAE-VCSGTGERFRIFR 1089 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQF 179 T + G+ Y+E G RVGWS Q +LG+D+ F F G + ++ Sbjct 1090 AEKTYAVKAGRWYFEFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWHQGN 1149 Query 180 DNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQALFPACVLKN 235 ++YG + D +GC +D+++ + F+ NG+ D G P C L Sbjct 1150 EHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCSLGV 1209 Query 236 AEL-KFNFGEE 245 A++ + NFG++ Sbjct 1210 AQVGRMNFGKD 1220 >sp|A7EWH6|MRH4_SCLS1 ATP-dependent RNA helicase mrh4, mitochondrial OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=mrh4 PE=3 SV=1 Length=615 Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 76/346 (22%), Positives = 142/346 (41%), Gaps = 62/346 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI---IGGVAARDQLSVLENGVDIV 343 P+A+I+ P+ EL Q +K F + K + +I G R++L +G+DI+ Sbjct 260 PRAIILVPTSELVTQVGTLLKLFSHTV---KFKAAVISSNFSGKVIRNRL-FSPSGIDIL 315 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TP L + + LS+V L++DEAD LL +G+S + + I + T ++L Sbjct 316 VSTPHLLSSIADSDPNILSRVTHLIIDEADSLLDRGFSPLTSAI---IDRATPSLEKL-- 370 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++CSAT+ P +D PD ++ +V P R + LG Sbjct 371 VLCSATI---------------PRSLDSFLRKRFPD-INRLVTPNLHAIPRRVQ-LGVVD 413 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + D N A + +WS + + V+ + + K + ++F + + Sbjct 414 VERDPYRNNKNL---ACADTIWSIGKAAAEHDGPVKGLMDVK--RILVFVNEREKTQEVA 468 Query 524 QYFIQQG--------GGPDKKGHQ----FSCVCLHGDRKPHERKQNLE------------ 559 Y + +G P+++ + F+ KP +L Sbjct 469 DYLVSKGVDAIALSRDTPEQRQSEMLASFTSPAKLSVEKPVSHPGSLSDNQPNYVPFGEV 528 Query 560 ----RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 + + + + L+ TD+ +RGID V +VI +P +++H Sbjct 529 APPVKRRLPNTKVLVTTDLGSRGIDTVAVRHVILYDVPHSTIDFIH 574 Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust. Identities = 22/60 (37%), Positives = 33/60 (55%), Gaps = 10/60 (17%) Query 15 QAVEEMDWLLPTDIQAESIPLILGGGD----------VLMAAETGSGKTGAFSIPVIQIV 64 QA+ E+ +PT +Q ++P +LG L+AAETGSGKT ++ IP I + Sbjct 156 QALPELKEHVPTPVQRIAVPALLGDQQSRRPKSEMEQYLIAAETGSGKTLSYLIPTINAI 215 >sp|Q4Z8K6|RBP9X_DROME Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster OX=7227 GN=RanBPM PE=1 SV=1 Length=962 Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 42/128 (33%), Positives = 61/128 (48%), Gaps = 13/128 (10%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFD--NYG 183 G +Y+EV S G +G + Q ++ G DK +G+ G S + + YG Sbjct 466 GLYYFEVRIISKGRNGYMGIGLTAQQFRMNRLPGWDKQSYGYHGDDGNSFSSSGNGQTYG 525 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA--ELKFN 241 FT D IGC ++ ++KNG DLG+AF P L+P L+ E+ N Sbjct 526 PTFTTGDVIGCCVNFVNNTCFYTKNGVDLGIAFRDLP----TKLYPTVGLQTPGEEVDAN 581 Query 242 FGEEEFKF 249 FG+E FKF Sbjct 582 FGQEPFKF 589 >sp|Q9FVV4|RH55_ARATH DEAD-box ATP-dependent RNA helicase 55 OS=Arabidopsis thaliana OX=3702 GN=RH55 PE=3 SV=1 Length=465 Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 10/116 (9%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P+ +I+ P+REL+ Q + + +D K RE+ D ++ E G +++ Sbjct 89 PHQVMGVIISPTRELSAQIHKVARAVR--LDFAKCREV-------EADMNTLEEEGANLL 139 Query 344 VGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 +GTPGRL D++ + L+ + L+LDEAD LL G+ +N + +++P+ G Sbjct 140 IGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 195 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/66 (38%), Positives = 42/66 (64%), Gaps = 2/66 (3%) Query 4 FSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FSE+ + +I +A++ + + T +QAE+IP + DV++ A TGSGKT AF +P I Sbjct 17 FSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFI 76 Query 62 QIVYET 67 +I+ + Sbjct 77 EIIRRS 82 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 7/124 (6%) Query 473 DNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG 532 D + G +P + EA + K V + E+K + ++F T C ++ + + Sbjct 207 DLAKAGLRNPYLKCEADQ--KSSQLVHLLIENKNKKLVVFFMT---CACVDYWGLVISKI 261 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P K F HG R L F + L+CTDVAARG+DI G+ Y+ ++ + Sbjct 262 PSLKSISF--FPTHGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIVYIRSLAI 319 Query 593 PDEK 596 D + Sbjct 320 KDRE 323 >sp|Q4P7M1|DBP9_USTMA ATP-dependent RNA helicase DBP9 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP9 PE=3 SV=1 Length=686 Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 24/56 (43%), Positives = 39/56 (70%), Gaps = 0/56 (0%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 P + +A+ ++ + +PT IQ ++IPL L G D+L A TGSGKT A+ +P++Q V + Sbjct 68 PRLLRALADLGYGIPTPIQQKAIPLALAGKDILARARTGSGKTLAYGLPLLQKVLD 123 Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 20/185 (11%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L K D ++ N Q+T +AL++ P+RELAEQ ++ +Y+ Sbjct 114 GLPLLQKVLDAKSAVAKSDANHQLT---------RALVLVPTRELAEQVFRHLSVVIEYV 164 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL-SQVRFLVLDEA 372 + +R + + + + Q +L D+V+ TP + + + L+L S + L +DEA Sbjct 165 RD-DIRLVNVAREASEKVQRLLLSEKPDVVIATPSKALNYLQNASLDLKSGMESLAIDEA 223 Query 373 DGLLSQGYSDFINRM--HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 D +LS G+ + + N +P Q + SAT+ S DV KL ++ P + Sbjct 224 DLILSYGHDADVKSLLGANFLPS------HFQSFLMSATMTS-DVSKLKGLLLRNPVVLK 276 Query 431 LKGED 435 L +D Sbjct 277 LNHDD 281 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 33/68 (49%), Gaps = 4/68 (6%) Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE----KEKVWYHVC 631 +RG+D V VIN LP +Y+HR+GR R G A+S V + K Y Sbjct 449 SRGVDFINVSCVINFDLPTSVDSYIHRVGRTARGGASGTALSFVVPSDQVGRSKYLYCAS 508 Query 632 SSRGKGCY 639 ++R + + Sbjct 509 TTRDESVF 516 >sp|P0CT33|TLH1_SCHPO ATP-dependent DNA helicase tlh1 (Fragment) OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tlh1 PE=3 SV=1 Length=1887 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 56/122 (46%), Gaps = 8/122 (7%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK--GD 565 +AIIFCRTK D + + + Q D H + GD ER+ N + F+ G Sbjct 1417 RAIIFCRTKKDVEYIHRRLHQS----DLFAHTHVTI-YTGDVSDEERQMNFDAFRNANGK 1471 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R +I T GI+ GV V++ LP +YV GR GR + +A +L + + Sbjct 1472 TRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIA-ALFYEKYDS 1530 Query 626 VW 627 W Sbjct 1531 TW 1532 >sp|Q1RKN3|TLH2_SCHPO ATP-dependent DNA helicase tlh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tlh2 PE=2 SV=1 Length=1919 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 56/122 (46%), Gaps = 8/122 (7%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK--GD 565 +AIIFCRTK D + + + Q D H + GD ER+ N + F+ G Sbjct 1417 RAIIFCRTKKDVEYIHRRLHQS----DLFAHTHVTI-YTGDVSDEERQMNFDAFRNANGK 1471 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R +I T GI+ GV V++ LP +YV GR GR + +A +L + + Sbjct 1472 TRIMIATKAFGLGINYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIA-ALFYEKYDS 1530 Query 626 VW 627 W Sbjct 1531 TW 1532 >sp|P36120|DBP7_YEAST ATP-dependent RNA helicase DBP7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP7 PE=1 SV=1 Length=742 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 70/133 (53%), Gaps = 13/133 (10%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q + L L+IGG + + + L G + ++GTPG Sbjct 224 ALVIAPTRELASQIYHVCSTLVSCCH--YLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281 Query 349 R-LDDLVSTG--KLNLSQ-VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK----- 399 R LD L +T K LSQ +R++VLDE D L+ G+ + I+ + + + + + Sbjct 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKL 341 Query 400 --RLQVIVCSATL 410 +L ++CSATL Sbjct 342 PHKLVHMLCSATL 354 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 48/93 (52%), Gaps = 7/93 (8%) Query 545 LHGDRKPHERKQNLERF------KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 LHG R L+ F KG + CTDVA+RG+D+ V VI + P ++ Sbjct 487 LHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCTDVASRGLDLPHVGSVIELDPPFAVED 546 Query 599 YVHRIGRVGRAERMGLA-ISLVATEKEKVWYHV 630 ++HR+GR RA G + + L+ E+EK ++ Sbjct 547 HLHRVGRTARAGEKGESLLFLLPGEEEKYMDYI 579 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query 4 FSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGG---DVLMAAETGSGKTGAFSIP 59 F+ +GV + +E+ M PT IQ ++IP I+G D + A+TGSGKT ++ +P Sbjct 145 FASLGVSSLLVSHLEQKMRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLP 204 Query 60 VIQIV 64 +I + Sbjct 205 IISTI 209 >sp|Q54CH6|IF4AX_DICDI Putative eukaryotic initiation factor 4A-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292914 PE=5 SV=1 Length=248 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/104 (32%), Positives = 55/104 (53%), Gaps = 18/104 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYI---------DNPKLRELLIIGGVAARDQLSVLE 337 P+ L++ P++EL++ T K I +N + L IGGV + +L+ Sbjct 100 PQILMILPTKELSQTT--------KVIYSSLGGGENNNNDFKVLSCIGGVKISMDIEILK 151 Query 338 NG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 G I++GTPGR+ DL S + + ++ LV DE D +LS+G+ Sbjct 152 KGNTQILLGTPGRISDLFSRKRFDTDNIKILVFDELDEILSRGF 195 >sp|A6ZZY8|DBP7_YEAS7 ATP-dependent RNA helicase DBP7 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP7 PE=3 SV=1 Length=742 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 70/133 (53%), Gaps = 13/133 (10%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+RELA Q + L L+IGG + + + L G + ++GTPG Sbjct 224 ALVIAPTRELASQIYHVCSTLVSCCH--YLVPCLLIGGERKKSEKARLRKGCNFIIGTPG 281 Query 349 R-LDDLVSTG--KLNLSQ-VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK----- 399 R LD L +T K LSQ +R++VLDE D L+ G+ + I+ + + + + + Sbjct 282 RVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKL 341 Query 400 --RLQVIVCSATL 410 +L ++CSATL Sbjct 342 PHKLVHMLCSATL 354 Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 31/93 (33%), Positives = 48/93 (52%), Gaps = 7/93 (8%) Query 545 LHGDRKPHERKQNLERF------KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 LHG R L+ F KG + CTDVA+RG+D+ V VI + P ++ Sbjct 487 LHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCTDVASRGLDLPHVGSVIELDPPFAVED 546 Query 599 YVHRIGRVGRAERMGLA-ISLVATEKEKVWYHV 630 ++HR+GR RA G + + L+ E+EK ++ Sbjct 547 HLHRVGRTARAGEKGESLLFLLPGEEEKYMDYI 579 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Query 4 FSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGG---DVLMAAETGSGKTGAFSIP 59 F+ +GV + +E+ M PT IQ ++IP I+G D + A+TGSGKT ++ +P Sbjct 145 FASLGVTSLLVSHLEQKMRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLP 204 Query 60 VIQIV 64 +I + Sbjct 205 IISTI 209 >sp|A5E572|DBP9_LODEL ATP-dependent RNA helicase DBP9 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP9 PE=3 SV=1 Length=606 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/153 (29%), Positives = 82/153 (54%), Gaps = 10/153 (7%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +++++ P+REL+ Q ++Q K+ +N K+ L + + + S+L N +I++ TP Sbjct 93 QSVVLVPTRELSNQVYQFMEQLIKFSNN-KIGILNLSSNYSDQVLKSLLINKPEIIISTP 151 Query 348 GRLDDLVST--GK--LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 +L + GK ++LS V+ L +DE D +LS GY D + ++ + +P K LQ Sbjct 152 SKLIQTLEAHEGKDIIDLSTVKNLTIDEVDLILSFGYKDDLQKLESYLPV----KKNLQT 207 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 + SAT++ D+ +L K P + L + S Sbjct 208 FLMSATVND-DLNELKAKFCTKPAILKLDDDQS 239 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 35/61 (57%), Gaps = 0/61 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 +RG+D V V+N LP ++YVHR+GR RA + G+A+S V EKE + S R Sbjct 398 VSRGVDFRNVACVLNFDLPTTSKSYVHRVGRTARAGKSGMALSFVIPEKEVGKHKTASLR 457 Query 635 G 635 Sbjct 458 S 458 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 39/57 (68%), Gaps = 1/57 (2%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVIQ 62 + + P + QA++++ + PT IQ+ +IPL L D++ A TGSGKT A++IP+IQ Sbjct 25 LNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPIIQ 81 >sp|P34640|DDX55_CAEEL Probable ATP-dependent RNA helicase DDX55 homolog OS=Caenorhabditis elegans OX=6239 GN=ZK512.2 PE=3 SV=2 Length=578 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 40/73 (55%), Gaps = 1/73 (1%) Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 PH R ++ F +I TDV ARGIDI + +VI LP +VHR GR R Sbjct 296 PH-RASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCG 354 Query 611 RMGLAISLVATEK 623 R G A+ L+A+E+ Sbjct 355 REGNALILIASEQ 367 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 36/127 (28%), Positives = 63/127 (50%), Gaps = 8/127 (6%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + K P ALI+ PSREL Q ++ I+ F + ++ L + GG + + Sbjct 71 IQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLN---LTVETVTGGQKVDKNIKMF 127 Query 337 EN-GVDIVVGTPGRLDDLVSTGKLNLSQ----VRFLVLDEADGLLSQGYSDFINRMHNQI 391 +N V+I+V TPGRL ++ K +++ ++ LV+DEAD + D + + + I Sbjct 128 KNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCI 187 Query 392 PQVTSDG 398 P+ G Sbjct 188 PKQRRTG 194 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 0/39 (0%) Query 26 TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 TD+Q S +L DV++ + TGSGKT AF +P+++++ Sbjct 33 TDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMI 71 >sp|A4QTC6|MRH4_PYRO7 ATP-dependent RNA helicase MRH4, mitochondrial OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=MRH4 PE=3 SV=1 Length=651 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 87/377 (23%), Positives = 151/377 (40%), Gaps = 90/377 (24%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN------GV 340 P+ +I+ P+ EL +Q K K R +I ++A +++EN G+ Sbjct 310 PRVVILVPTAELVDQVGRVAKSLSHVA---KARTRMISANMSA----TMIENDVFSPAGI 362 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ-IPQVTSDGK 399 DI++ TP L + + LS+V LV+DEAD LL + +S+ + ++ +P + Sbjct 363 DILISTPHLLASIAESHPNILSRVSHLVVDEADSLLDRSFSEVTTPIIDRALPSIR---- 418 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWE 457 Q+++CSAT+ L+ + FP + + ++P V Sbjct 419 --QLVLCSATIPRRLDNYLASR---FPNMRRITTPNLHAIPRRVQ--------------- 458 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWS---EAIK---ILKGEYAVRAIKEHKMDQAII 511 LG + D N A + +WS EA + +KG+ VR I ++ Sbjct 459 -LGVIDVARDPYRGNKNI---ACADAIWSIGKEAGRHEGPVKGQVDVRRI--------MV 506 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV----- 566 F + + +Y +G V LH D + + L F + Sbjct 507 FVNEREKTQEVAEYLKSKG---------IDAVALHRDTSEERQSEMLASFTSNETMSIPT 557 Query 567 ------------------RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + ++ TD+A+RGID V +V+ +P +++HR+GR GR Sbjct 558 PEGGVAGSPRSSRTLPNTKVIVATDLASRGIDTLAVRHVVLYDVPHTTIDFIHRLGRAGR 617 Query 609 AERMGLAISLVATEKEK 625 R G I LV + K Sbjct 618 MGRRGRGIVLVGNDDRK 634 >sp|Q869P0|DDX31_DICDI Probable ATP-dependent RNA helicase ddx31 OS=Dictyostelium discoideum OX=44689 GN=ddx31 PE=3 SV=2 Length=908 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 9/146 (6%) Query 290 LIVEPSRELAEQTLNNIKQFKK--YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +I+ P+REL+ Q +++ K Y P + I+GG + + + G++I+V TP Sbjct 284 VIITPTRELSSQIYEELQKLLKPFYWIVPGI----IMGGENRSAEKARIRKGINILVATP 339 Query 348 GRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK-RLQVIV 405 GRL D L +T +++ +LDEAD LL G+ + + N + K + Q I+ Sbjct 340 GRLLDHLQNTQSFPTDNIKWCILDEADKLLDLGFEKDVTTIINLLDSKKRTMKFKRQNIL 399 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDL 431 SATL S + +L+ + P ++ L Sbjct 400 VSATL-SEGISRLASLSLTSPVYIGL 424 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 51/107 (48%), Gaps = 6/107 (6%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG+ R + FK L+ TDV+ARG+D+ V +++ + ++Y+HRIG Sbjct 609 LHGELDQQTRTKTFFDFKNSPNGILLTTDVSARGLDLPSVNWIVQYDPCSDTKDYIHRIG 668 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 R R G ++ + ++K H+ +N +KE TI Sbjct 669 RTARLGNQGCSLLFLLPSEKKYIDHLAK------FNVSVKEMKVTTI 709 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/42 (55%), Positives = 29/42 (69%), Gaps = 0/42 (0%) Query 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 PT IQ SI IL G D L+ A+TGSGKT ++ IPV+Q + E Sbjct 231 PTHIQEASITPILKGNDALVKAQTGSGKTLSYLIPVVQKLTE 272 >sp|Q4WYJ7|SPB4_ASPFU ATP-dependent rRNA helicase spb4 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=spb4 PE=3 SV=2 Length=640 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 56/99 (57%), Gaps = 1/99 (1%) Query 537 GHQFSCVCLHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 G F + LHG + + R++N RF D L+ TDVAARG+DI V V+ + P + Sbjct 320 GDDFLLIPLHGKHQANVRQKNFNRFINSHDPAILLTTDVAARGLDIPSVDLVVQIDPPSD 379 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 ++++HR GR GRA R GL++ L+ +E+ + R Sbjct 380 PKSFIHRCGRAGRAGRRGLSVVLLHPGREEDYVSFLEVR 418 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 65/136 (48%), Gaps = 26/136 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY------IDNP----------------KLRELLIIGG 326 A+I+ P+RELA Q N + + NP K+ L++GG Sbjct 90 AIIISPTRELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGG 149 Query 327 --VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSD 382 A D + L+ +++V TPGRL +L+S+ ++ Q F LVLDEAD LL G+ + Sbjct 150 STTPAEDLSTFLKRSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209 Query 383 FINRMHNQIPQVTSDG 398 + + ++P+ G Sbjct 210 TLQNILRRLPKQRRTG 225 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + +A+ M + T +QA +IPL + DV++ A TGSGKT +F IPV++ Sbjct 25 VLEAMSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVE 74 >sp|A1D699|SPB4_NEOFI ATP-dependent rRNA helicase spb4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=spb4 PE=3 SV=1 Length=640 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 56/99 (57%), Gaps = 1/99 (1%) Query 537 GHQFSCVCLHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 G F + LHG + + R++N RF D L+ TDVAARG+DI V V+ + P + Sbjct 320 GDDFLLIPLHGKHQANVRQKNFNRFINSHDPAILLTTDVAARGLDIPSVDLVVQIDPPSD 379 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 ++++HR GR GRA R GL++ L+ +E+ + R Sbjct 380 PKSFIHRCGRAGRAGRRGLSVVLLHPGREEDYVSFLEVR 418 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 65/136 (48%), Gaps = 26/136 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY------IDNP----------------KLRELLIIGG 326 A+I+ P+RELA Q N + + NP K+ L++GG Sbjct 90 AIIISPTRELASQIYNVLSSLLAFHPPSAAAINPSEDDDAPRPKFPSSTLKVVPQLLLGG 149 Query 327 --VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSD 382 A D + L+ +++V TPGRL +L+S+ ++ Q F LVLDEAD LL G+ + Sbjct 150 STTPAEDLSTFLKRSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209 Query 383 FINRMHNQIPQVTSDG 398 + + ++P+ G Sbjct 210 TLQNILRRLPKQRRTG 225 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + +A+ M + T +QA +IPL + DV++ A TGSGKT +F IPV++ Sbjct 25 VLEAMSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVE 74 >sp|A2QZ71|MRH4_ASPNC ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=mrh4 PE=3 SV=2 Length=633 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 21/158 (13%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+ +I+ P+ EL Q +K + K R +I + R S+L N G+DI+V Sbjct 272 PRVIILVPTSELVAQVGAKVKALSHTV---KYRSGMISSNLTPRRIKSILFNPSGIDILV 328 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD L+ + F+ I + S +L I Sbjct 329 ATPHLLASIAKTDPYVLSRVSHLVLDEADSLMDRS---FLPTTTEIIEKSASSLHKL--I 383 Query 405 VCSATLHSF----------DVKKLSEKIMH-FPTWVDL 431 +CSAT+ D+++L+ +H P V L Sbjct 384 LCSATIPRSLDNLLRKRYPDIRRLTTPNLHAIPRRVQL 421 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 23/61 (38%), Positives = 37/61 (61%), Gaps = 0/61 (0%) Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + + L+ TD+A+RGID V VI +P +++HR+GR+GR + G A+ LV + Sbjct 556 NTKVLVTTDIASRGIDTIAVKTVILYHVPHNTIDFIHRLGRLGRMGKRGRAVVLVGKKDR 615 Query 625 K 625 K Sbjct 616 K 616 Score = 37.7 bits (86), Expect = 0.38, Method: Compositional matrix adjust. Identities = 27/83 (33%), Positives = 43/83 (52%), Gaps = 22/83 (27%) Query 1 MAAFSEMGVMPEI-----AQAVEEMDWLLPTDIQAESIPLIL-------GGGDV------ 42 +++F + ++P + +QA+ ++PT IQ +IP +L DV Sbjct 141 VSSFDQFPLLPVVRHSISSQALSRTGDIVPTPIQRLAIPQLLKDPIPKRTSKDVSDHEPN 200 Query 43 ----LMAAETGSGKTGAFSIPVI 61 L+AAETGSGKT A+ IP+I Sbjct 201 FEQYLLAAETGSGKTLAYLIPLI 223 >sp|A7TE77|MRH4_VANPO ATP-dependent RNA helicase MRH4, mitochondrial OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=MRH4 PE=3 SV=1 Length=539 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 66/128 (52%), Gaps = 14/128 (11%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +++I P+ EL +Q N +K+ + ++ K G + + L+N +DI++ TP Sbjct 183 RSVIFLPTHELVDQVYNTVKKTE---NDLKFHVYKWDSGTKYPEIVEKLKNRIDILITTP 239 Query 348 GRLDDL-----VSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 +L +L +S LS+V+F+VLDEAD LL + + + +R +P Sbjct 240 AKLLNLFNIRMISRADRLLSEVKFVVLDEADTLLDKSWVEDTHRAIRSLPNTN------H 293 Query 403 VIVCSATL 410 ++ CSAT+ Sbjct 294 LLFCSATI 301 Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust. Identities = 18/65 (28%), Positives = 37/65 (57%), Gaps = 1/65 (2%) Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + ++ L+ TD+ ARG++ GV ++ +P + +HR+GR R ++ G + ++ + Sbjct 461 ESSLKVLVSTDLMARGLNFQGVRNLVLYDVPQTSIDLIHRVGRTARMQQRG-RVFMITDK 519 Query 623 KEKVW 627 K K W Sbjct 520 KTKSW 524 >sp|P0CQ94|DBP7_CRYNJ ATP-dependent RNA helicase DBP7 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP7 PE=3 SV=1 Length=948 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/115 (35%), Positives = 57/115 (50%), Gaps = 18/115 (16%) Query 289 ALIVEPSRELAEQTLNNIKQF--------------KKYIDNPKLREL---LIIGGVAARD 331 A+I+ P+RELA+Q ++Q + D P R L L+ GG Sbjct 298 AIILAPTRELAQQISKVLEQLLHMSFAASKEGSDDEDEDDRPFTRWLVSGLLTGGSTRTH 357 Query 332 QLSVLENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + + L GV I+V TPGRL D L +T ++ FLVLDEAD L+ G+ + I Sbjct 358 EKAKLRKGVPILVSTPGRLLDHLQNTMSFQCAKTMFLVLDEADRLMDLGFEETIQ 412 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/84 (36%), Positives = 42/84 (50%), Gaps = 4/84 (5%) Query 545 LHGDRKPHERKQNLERFKKGDVR--FLICTDVAARGIDIHGVPYVINVTLPDE--KQNYV 600 LHG R +L+ F + L T VA+RG+D+ V V+ LP E YV Sbjct 647 LHGSLPLRTRLASLKAFATSSSQPSVLFATSVASRGLDLPLVRAVVQYDLPTEGGANEYV 706 Query 601 HRIGRVGRAERMGLAISLVATEKE 624 HR+GR RA + G A + V+ +E Sbjct 707 HRVGRTARAGKGGEAWAFVSPSEE 730 >sp|P0CQ95|DBP7_CRYNB ATP-dependent RNA helicase DBP7 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP7 PE=3 SV=1 Length=948 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 40/115 (35%), Positives = 57/115 (50%), Gaps = 18/115 (16%) Query 289 ALIVEPSRELAEQTLNNIKQF--------------KKYIDNPKLREL---LIIGGVAARD 331 A+I+ P+RELA+Q ++Q + D P R L L+ GG Sbjct 298 AIILAPTRELAQQISKVLEQLLHMSFAASKEGSDDEDEDDRPFTRWLVSGLLTGGSTRTH 357 Query 332 QLSVLENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + + L GV I+V TPGRL D L +T ++ FLVLDEAD L+ G+ + I Sbjct 358 EKAKLRKGVPILVSTPGRLLDHLQNTMSFQCAKTMFLVLDEADRLMDLGFEETIQ 412 Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/84 (36%), Positives = 42/84 (50%), Gaps = 4/84 (5%) Query 545 LHGDRKPHERKQNLERFKKGDVR--FLICTDVAARGIDIHGVPYVINVTLPDE--KQNYV 600 LHG R +L+ F + L T VA+RG+D+ V V+ LP E YV Sbjct 647 LHGSLPLRTRLASLKAFATSSSQPSVLFATSVASRGLDLPLVRAVVQYDLPTEGGANEYV 706 Query 601 HRIGRVGRAERMGLAISLVATEKE 624 HR+GR RA + G A + V+ +E Sbjct 707 HRVGRTARAGKGGEAWAFVSPSEE 730 >sp|Q5B8F4|SPB4_EMENI ATP-dependent rRNA helicase spb4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=spb4 PE=3 SV=1 Length=638 Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/136 (31%), Positives = 66/136 (49%), Gaps = 26/136 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY---------------IDNPK-----LREL--LIIGG 326 A+IV P+RELA Q N + + + PK LR + L++GG Sbjct 90 AIIVSPTRELASQIYNVLTSLLAFHPASAAVINTSETEDVPRPKHSSSVLRVVPQLLLGG 149 Query 327 VA--ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSD 382 A D + L+ +++V TPGRL +L+S+ + Q F LVLDEAD LL G+ + Sbjct 150 STSPAEDLSTFLKRSPNLLVATPGRLLELLSSPHVYCPQSSFEMLVLDEADRLLDLGFKE 209 Query 383 FINRMHNQIPQVTSDG 398 + + ++P+ G Sbjct 210 TLQNILRRLPKQRRTG 225 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 55/99 (56%), Gaps = 1/99 (1%) Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 G+ F + LHG + R++N RF + L+ TDVA+RG+DI V V+ + P + Sbjct 320 GNDFQLIPLHGKHPANVRQKNFNRFVNAHNPAILLTTDVASRGLDIPSVDLVVQIDPPSD 379 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 + ++HR GR GRA R GL++ L+ +E+ + R Sbjct 380 PKTFIHRCGRAGRAGRRGLSVVLLHPGREEDYVSFLEVR 418 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + AV M + T +QA +IPL + DV++ A TGSGKT +F IPV++ Sbjct 25 VLDAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVE 74 >sp|Q8IBN8|DDX31_PLAF7 ATP-dependent DNA helicase DDX31 OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=DDX31 PE=1 SV=1 Length=899 Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 63/112 (56%), Gaps = 7/112 (6%) Query 289 ALIVEPSRELAEQTLNNIKQF--KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 L++ P+RELA Q +NN+ K Y P + I GG + + + L+ G+ I+ T Sbjct 252 VLVLSPTRELAIQ-INNLFCILTKPY---PYIVASCITGGEKKKSEKNRLKKGISILTCT 307 Query 347 PGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 PGRL D L +T L L+ ++ ++LDEAD ++ G D I +++ I ++ + Sbjct 308 PGRLLDHLENTKSLKLTFLKMVILDEADKIIYLGTQDKIKLIYDMIRKIKQE 359 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG+ +R N F K + L+CTD+ +RGI + VI P + Y+H++G Sbjct 674 LHGNLSKEDRLGNFMDFSKTNNSILLCTDIISRGIHFDSLSVVIQYDPPQILEEYIHKVG 733 Query 605 RVGRAERMGLA-ISLVATEKE 624 R R + G A + L+ ++K+ Sbjct 734 RTARLNKQGSAYLFLLKSQKQ 754 Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + +E+ +++ T IQ SIPL D+ + + TGSGKT ++IP I+ Sbjct 184 LINTLEKNEFIKMTSIQKMSIPLFFKPNDIFLKSMTGSGKTLCYAIPSIE 233 >sp|P0CR10|DBP9_CRYNJ ATP-dependent RNA helicase DBP9 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP9 PE=3 SV=1 Length=627 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 16 AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKD 70 A+ + + PT +QA++IPL+L G DVL A TGSGKT A+ +P +Q + E D Sbjct 35 ALADQKFAHPTLVQAKAIPLLLEGKDVLARARTGSGKTAAYIVPAVQKILEAKAD 89 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/151 (34%), Positives = 81/151 (54%), Gaps = 12/151 (8%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 A +A+I+ P++ELA Q + K KY D L + + + A Q +L + DIV+ Sbjct 98 QATRAIILVPTKELALQVSSFTKNVTKYCDG--LVQCVDVAAGGASIQRVLLNDKPDIVI 155 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ----IPQVTSDGKR 400 TP +L L+ + L+LSQ+ FL +DEAD LLS G+ D + R+ + IP++ G Sbjct 156 STPTKLLSLLQSKSLSLSQLSFLAIDEADLLLSYGFKDDLTRIMDPTSGWIPKLGVQG-- 213 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 + SATL S DV+ + ++ P + L Sbjct 214 ---CLMSATL-SDDVEGIKGLVLRNPAILTL 240 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/48 (48%), Positives = 28/48 (58%), Gaps = 0/48 (0%) Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 T ARGID VIN LP +Y+HR+GR RA + GLA+S V Sbjct 405 TSSLARGIDFTSASSVINFDLPLTSTSYMHRVGRTARAGQSGLALSFV 452 >sp|P0CR11|DBP9_CRYNB ATP-dependent RNA helicase DBP9 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP9 PE=3 SV=1 Length=627 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 0/55 (0%) Query 16 AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKD 70 A+ + + PT +QA++IPL+L G DVL A TGSGKT A+ +P +Q + E D Sbjct 35 ALADQKFAHPTLVQAKAIPLLLEGKDVLARARTGSGKTAAYIVPAVQKILEAKAD 89 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 51/151 (34%), Positives = 81/151 (54%), Gaps = 12/151 (8%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 A +A+I+ P++ELA Q + K KY D L + + + A Q +L + DIV+ Sbjct 98 QATRAIILVPTKELALQVSSFTKNVTKYCDG--LVQCVDVAAGGASIQRVLLNDKPDIVI 155 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ----IPQVTSDGKR 400 TP +L L+ + L+LSQ+ FL +DEAD LLS G+ D + R+ + IP++ G Sbjct 156 STPTKLLSLLQSKSLSLSQLSFLAIDEADLLLSYGFKDDLTRIMDPTSGWIPKLGVQG-- 213 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 + SATL S DV+ + ++ P + L Sbjct 214 ---CLMSATL-SDDVEGIKGLVLRNPAILTL 240 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/48 (48%), Positives = 28/48 (58%), Gaps = 0/48 (0%) Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 T ARGID VIN LP +Y+HR+GR RA + GLA+S V Sbjct 405 TSSLARGIDFTSASSVINFDLPLTSTSYMHRVGRTARAGQSGLALSFV 452 >sp|Q74ZC1|DBP9_EREGS ATP-dependent RNA helicase DBP9 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP9 PE=3 SV=1 Length=595 Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 0/50 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 A+RG+D V V+N LP ++YVHRIGR RA + G AIS V KE Sbjct 386 ASRGVDFQNVSCVLNFDLPTTAKSYVHRIGRTARAGKSGTAISFVVPLKE 435 Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 77/150 (51%), Gaps = 11/150 (7%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 +++ P+RELA+Q +++ Y +R L I V +L +I++ TP + Sbjct 97 VVLVPTRELAQQVRVVLEKLVLYCSK-DIRLLNISANVDDSVLGPLLAENPEIIISTPSQ 155 Query 350 LDDLVSTGK----LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 L ++ GK ++L +RFLV+DE D +L+ GY + + ++ +P K LQ + Sbjct 156 LVKILE-GKHLQTISLRDLRFLVIDEVDLILTFGYQEDLLKISQYLPL----KKNLQAFL 210 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 SATL+ ++++L K P + L ++ Sbjct 211 MSATLNE-EIQELKTKFCRSPAILKLNDDE 239 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVI 61 FS + + Q+++ + PT IQ+ +IPL L D++ A TGSGKT A+ IPV+ Sbjct 17 TFSSFQLDLRLQQSLKSSGFHHPTLIQSSAIPLALEQKRDIIAKASTGSGKTLAYLIPVV 76 Query 62 QIVYE 66 Q + E Sbjct 77 QTILE 81 >sp|A1CTL8|MAK5_ASPCL ATP-dependent RNA helicase mak5 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=mak5 PE=3 SV=1 Length=774 Score = 53.1 bits (126), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 27/70 (39%), Positives = 42/70 (60%), Gaps = 0/70 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ + + E+ + +M + PT +QA IP IL G DV+ A TGSGKT AF IP+ Sbjct 197 VSAWDALNLSTELLTGISKMKFTSPTAVQAACIPHILDGHDVVGKASTGSGKTLAFGIPI 256 Query 61 IQIVYETLKD 70 ++ E +D Sbjct 257 LEHYLEKNRD 266 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 3/74 (4%) Query 546 HGDRKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 H R +++ERF LI TDVAARG+DI G+ VI+ P YVHR Sbjct 534 HSSMAQKARLRSVERFSSPTANPGTILIATDVAARGLDIKGIDLVIHYHAPRTADTYVHR 593 Query 603 IGRVGRAERMGLAI 616 GR RA G ++ Sbjct 594 SGRTARAGASGKSV 607 >sp|Q6CWQ5|MRH4_KLULA ATP-dependent RNA helicase MRH4, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=MRH4 PE=3 SV=1 Length=584 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%) Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 E F + ++ L+ TDV ARGI+ G YV+ +P+ + VHR+GR GR + G ++ + Sbjct 502 EAFVESTLKVLVTTDVLARGINFRGCRYVVLYDIPNTPVDLVHRVGRTGRMNQKG-SVFI 560 Query 619 VATEKEKVWYHVCSS 633 + ++ K W S Sbjct 561 ITGKRVKNWVKAIPS 575 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 22/132 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +++I+ P+ EL EQ + + + + + G + + + L+ +DI+V TP Sbjct 230 RSIILLPTHELVEQVYQTVSKLEPALG---MHTYKWDAGSSYKGFVEALKGRIDIMVTTP 286 Query 348 GRLDDLVSTGKLN-----LSQVRFLVLDEADGLLSQGYSD----FINRMHNQIPQVTSDG 398 G++ L + +N LSQV+FLV+DEAD LL + + + I M N Sbjct 287 GKILSLFNISMVNRPDRILSQVKFLVMDEADTLLDKSWVEDSYSTIKHMQNL-------- 338 Query 399 KRLQVIVCSATL 410 V+ CSAT+ Sbjct 339 --NHVLFCSATI 348 Score = 33.9 bits (76), Expect = 5.8, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 25/38 (66%), Gaps = 9/38 (24%) Query 43 LMAAETGSGKTGAFSIPVIQIV---------YETLKDQ 71 L+AAETGSGKT A+ IP++ + +ETLKD+ Sbjct 189 LIAAETGSGKTMAYLIPLVDYLKRTEMENPSWETLKDK 226 >sp|Q1E1R7|SPB4_COCIM ATP-dependent rRNA helicase SPB4 OS=Coccidioides immitis (strain RS) OX=246410 GN=SPB4 PE=3 SV=2 Length=653 Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/114 (32%), Positives = 63/114 (55%), Gaps = 7/114 (6%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNP-KLRELLIIGGVA--ARDQLSVLENGVD 341 +AP A ++PS +++T + Y + K+ L++GG A+D + L+ + Sbjct 117 HAPSAAAIQPST--SDETADGETTLPSYPSSTLKVVPQLLLGGATTPAQDLSTFLKRSPN 174 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSDFINRMHNQIPQ 393 + V TPGRL +L+S+ ++ Q F LVLDEAD LL G+ D + + ++P+ Sbjct 175 LFVSTPGRLLELLSSPHVHCPQTSFEVLVLDEADRLLDLGFKDDLQKTLARLPK 228 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%) Query 540 FSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 F + LHG P+ R++N RF L+ TDVAARG+DI V VI P + + Sbjct 331 FVTLPLHGKHPPNVRQKNFSRFTNSVSPSVLLTTDVAARGLDIPLVDLVIQFDPPTDPKA 390 Query 599 YVHRIGRVGRAERMGLAISLVATEKEK 625 Y+HR GR GRA R GL++ L+ +E+ Sbjct 391 YLHRCGRAGRAGRRGLSVILLCPGREE 417 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 I AV M + T +QA +IPL +G DV++ A TGSGKT AF IPV++ Sbjct 28 ILDAVAAMGFTRMTPVQASTIPLFMGHKDVVVEAVTGSGKTMAFLIPVVE 77 >sp|Q755C5|MRH4_EREGS ATP-dependent RNA helicase MRH4, mitochondrial OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRH4 PE=3 SV=1 Length=554 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 8/100 (8%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A ++LI+ P+ EL EQ +++ ++ + +L+ + +D + + VDI+V Sbjct 199 ALRSLILVPTHELVEQVYMTLEKLQEPL---QLKTFKLDRDTPYKDIVEAFKGRVDIMVT 255 Query 346 TPGRLDDLVSTGKLN-----LSQVRFLVLDEADGLLSQGY 380 TPG+L L L+ LSQVRF V+DEAD L+ Q + Sbjct 256 TPGKLRGLFKIRMLHRPDRILSQVRFAVVDEADTLMDQSW 295 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/77 (34%), Positives = 38/77 (49%), Gaps = 12/77 (16%) Query 549 RKPHER------------KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 +KP ER K N +R ++ L+ TDV +RGI+ GV +VI +P + Sbjct 450 KKPQERRLPNSNIKVADSKDNGQRSVSSPLKVLVTTDVLSRGINFKGVKHVILYDVPAKS 509 Query 597 QNYVHRIGRVGRAERMG 613 + VHR+GR R G Sbjct 510 IDLVHRVGRTSRMNERG 526 >sp|Q5R881|RSPRY_PONAB RING finger and SPRY domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSPRY1 PE=2 SV=1 Length=576 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/178 (24%), Positives = 72/178 (40%), Gaps = 23/178 (13%) Query 93 MNPYDRGSAFAIGSDGLCCQSR-EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST 151 +N D I GL ++R + + R T + G YYEV+ G+ ++GW+T Sbjct 322 LNSNDVSEYLKISPHGL--EARCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWAT 379 Query 152 MQASL------DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMH--------DTIGCYLD 197 + +G D++ + G +Q Y H DT+G LD Sbjct 380 RDSKFLNHEGYGIGDDEYSCAYDGC------RQLIWYNARSKPHIHPCWKEGDTVGFLLD 433 Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 +++ + F NG L ++ + A + + +FNFG + FK+PP F Sbjct 434 LNEKQMIFFLNGNQLPPEKQVFSSTVSGFFAAASFMSYQQCEFNFGAKPFKYPPSMKF 491 >sp|Q95LP3|RSPRY_MACFA RING finger and SPRY domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=RSPRY1 PE=2 SV=1 Length=576 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/178 (24%), Positives = 72/178 (40%), Gaps = 23/178 (13%) Query 93 MNPYDRGSAFAIGSDGLCCQSR-EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST 151 +N D I GL ++R + + R T + G YYEV+ G+ ++GW+T Sbjct 322 LNSNDVSEYLKISPHGL--EARCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWAT 379 Query 152 MQASL------DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMH--------DTIGCYLD 197 + +G D++ + G +Q Y H DT+G LD Sbjct 380 RDSKFLNHEGYGIGDDEYSCAYDGC------RQLIWYNARSKPHIHPCWKEGDTVGFLLD 433 Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 +++ + F NG L ++ + A + + +FNFG + FK+PP F Sbjct 434 LNEKQMIFFLNGNQLPPEKQVFSSTISGFFAAASFMSYQQCEFNFGAKPFKYPPSMKF 491 >sp|Q96DX4|RSPRY_HUMAN RING finger and SPRY domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSPRY1 PE=1 SV=1 Length=576 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/178 (24%), Positives = 72/178 (40%), Gaps = 23/178 (13%) Query 93 MNPYDRGSAFAIGSDGLCCQSR-EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST 151 +N D I GL ++R + + R T + G YYEV+ G+ ++GW+T Sbjct 322 LNSNDVSEYLKISPHGL--EARCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWAT 379 Query 152 MQASL------DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMH--------DTIGCYLD 197 + +G D++ + G +Q Y H DT+G LD Sbjct 380 RDSKFLNHEGYGIGDDEYSCAYDGC------RQLIWYNARSKPHIHPCWKEGDTVGFLLD 433 Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 +++ + F NG L ++ + A + + +FNFG + FK+PP F Sbjct 434 LNEKQMIFFLNGNQLPPEKQVFSSTVSGFFAAASFMSYQQCEFNFGAKPFKYPPSMKF 491 >sp|Q8BVR6|RSPRY_MOUSE RING finger and SPRY domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rspry1 PE=1 SV=1 Length=576 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 42/178 (24%), Positives = 71/178 (40%), Gaps = 23/178 (13%) Query 93 MNPYDRGSAFAIGSDGLCCQSR-EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST 151 +N D I GL ++R + + R T + G YYEV+ G+ ++GW+T Sbjct 322 LNSNDVSEYLKISPHGL--EARCDASSFESVRCTFCVDTGVWYYEVTVVTSGVMQIGWAT 379 Query 152 MQASL------DLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMH--------DTIGCYLD 197 + +G D++ + G +Q Y H DT+G LD Sbjct 380 RDSKFLNHEGYGIGDDEYSCAYDGC------RQLIWYNARSKPHVHPCWKEGDTVGFLLD 433 Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 +++ + F NG L ++ + A + + +FNFG FK+PP F Sbjct 434 LNEKQMIFFLNGNQLPPEKQVFSSTVSGFFAAASFMSYQQCEFNFGARPFKYPPSMKF 491 >sp|Q4P0Y5|DBP7_USTMA ATP-dependent RNA helicase DBP7 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP7 PE=3 SV=1 Length=974 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 40/136 (29%), Positives = 66/136 (49%), Gaps = 23/136 (17%) Query 289 ALIVEPSRELAEQTLN----------NIKQFKKYIDNPKLREL-----LIIGGVAARDQL 333 A+++ P+RELA Q ++K+ + ++ R L+ GG + Sbjct 284 AIVLAPTRELARQIYEVLEKLVSLALSLKEQNQEVEGTVRRTRWLVPGLLSGGSTKNHEK 343 Query 334 SVLENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 L G I+V TPGRL D L +T ++ + R+LVLDEAD LL G+ + + + + Sbjct 344 QRLRKGCPILVSTPGRLLDHLQNTSSFDVGKCRWLVLDEADRLLEMGFEEQLTGIVRAL- 402 Query 393 QVTSDGKRLQVIVCSA 408 DG+R + C+A Sbjct 403 ----DGRR--NLACTA 412 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 13/102 (13%) Query 545 LHGDRKPHERKQNLERFKKGDVR-----------FLICTDVAARGIDIHGVPYVINVTLP 593 LHG ER +L+ F + L+CT VA+RG+D+ V VI + P Sbjct 612 LHGSMTQQERISSLKGFSGIRTKHSAERQGFQGSILLCTSVASRGLDLPEVGCVIQLDPP 671 Query 594 DEK--QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 E + Y+HR+GR R R G + LV ++ HV S Sbjct 672 TEGGIEEYLHRVGRTARVGRAGESWLLVLPQELGWVEHVLES 713 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 18/41 (44%), Positives = 28/41 (68%), Gaps = 3/41 (7%) Query 25 PTDIQAESIPLILGGG---DVLMAAETGSGKTGAFSIPVIQ 62 PT IQ ++P +L G D+L+ A+TGSGKT + +P++Q Sbjct 225 PTAIQKAALPHLLHPGLDRDILIQAQTGSGKTLTYLLPIVQ 265 >sp|A1CL59|SPB4_ASPCL ATP-dependent rRNA helicase spb4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=spb4 PE=3 SV=1 Length=639 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 54/99 (55%), Gaps = 1/99 (1%) Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 G F + LHG + + R++N RF L+ TDVA+RG+DI V V+ + P + Sbjct 320 GDDFLLIPLHGKHQANVRQKNFNRFLSSHSPAILLTTDVASRGLDIPSVDLVVQIDPPSD 379 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 + ++HR GR GRA R GL++ ++ +E+ + R Sbjct 380 PKTFIHRCGRAGRAGRRGLSVVMLHPGREEDYVSFLDVR 418 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/136 (29%), Positives = 65/136 (48%), Gaps = 26/136 (19%) Query 289 ALIVEPSRELAEQTLNNIKQFKKY-------------IDNP---------KLRELLIIGG 326 A+I+ P+RELA Q + ++ + D P K+ L++GG Sbjct 90 AIIISPTRELASQIHSVMQSLLAFHPPSAAAMTPLDDDDAPRQKFPSSTLKVVPQLLLGG 149 Query 327 --VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF--LVLDEADGLLSQGYSD 382 A D L+ +++V TPGRL +L+S+ ++ Q F LVLDEAD LL G+ + Sbjct 150 STTPAEDLSRFLKLSPNVLVSTPGRLLELLSSPHVHCPQSSFEMLVLDEADRLLDLGFKE 209 Query 383 FINRMHNQIPQVTSDG 398 + + ++P+ G Sbjct 210 TLQNILRRLPKQRRTG 225 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 0/50 (0%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + +A+ M + T +QA +IPL + DV++ A TGSGKT +F +P+++ Sbjct 25 VLEAMSSMGFARMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLLPIVE 74 >sp|Q9W3Y5|Y4443_DROME Putative ATP-dependent RNA helicase CG14443 OS=Drosophila melanogaster OX=7227 GN=CG14443 PE=3 SV=2 Length=736 Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 55/275 (20%), Positives = 110/275 (40%), Gaps = 63/275 (23%) Query 341 DIVVGTPGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI-PQVTSD 397 D++V + GRL ++ K + L + +LVLD D ++ G I R+ ++ P Sbjct 451 DLLVASAGRLLQMIDNKKHVVELERCTYLVLDNIDRMIDVGLEGNICRLLCRLRPHA--- 507 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV-----VVPVNPKT 452 Q+IV S+T S ++K+++ K + T + + +++ + ++ VV K Sbjct 508 ----QLIV-SSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLSKV 562 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 +RL + L + +D + G+ + ++ +++ + Sbjct 563 ERLMKELTAIYDTSD------------------------IPGKVVIYVKRQKVVEELVDL 598 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 R + C+ + HG R E + + F G ++ T Sbjct 599 IRNCVPCEGI-----------------------HGGRTAQENQGIIHDFGTGAYNIIVAT 635 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 + + +D+ G+ YVIN PD YV R+ R G Sbjct 636 QMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTG 670 Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust. Identities = 18/59 (31%), Positives = 32/59 (54%), Gaps = 0/59 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F G I Q +E+ + PT IQA++ + G +++M + G+GKT + +P I Sbjct 331 SFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPGI 389 >sp|Q9C8J7|TRO_ARATH Protein TRAUCO OS=Arabidopsis thaliana OX=3702 GN=TRO PE=1 SV=1 Length=509 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 55/198 (28%), Positives = 78/198 (39%), Gaps = 54/198 (27%) Query 104 IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEV---SCHDQGLCRVGWSTMQASLD--L 158 I D L S K + RAT+G+++G Y+E+ S + G R+GWST + L + Sbjct 286 ISEDRLTAGSS--KGYRMVRATRGVVEGAWYFEIKVLSLGETGHTRLGWSTDKGDLQAPV 343 Query 159 GTDKFGFGFGGT-GKKSHNKQFDNYGEE-FTMHDTIGCYLDIDKG--------------- 201 G D FGF G K H + Y EE + D IG Y+++ G Sbjct 344 GYDGNSFGFRDIDGCKIHKALRETYAEEGYKEGDVIGFYINLPDGESFAPKPPHYVFYKG 403 Query 202 --------------------HVKFSKNGKDLGLAFEIPPHMKNQALFPACVL------KN 235 + F KNG G AF + +PA + N Sbjct 404 QRYICAPDAKEEPPKVVPGSEISFFKNGVCQGAAFT---DIVGGRYYPAASMYTLPDQSN 460 Query 236 AELKFNFGEEEFKFPPKD 253 +KFNFG F+F P+D Sbjct 461 CLVKFNFG-PSFEFFPED 477 >sp|O13983|HRQ1_SCHPO ATP-dependent helicase hrq1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hrq1 PE=1 SV=4 Length=1063 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 80/372 (22%), Positives = 148/372 (40%), Gaps = 52/372 (14%) Query 266 IVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + S SG + + Q L N A V P++ LA+ ++ Y+ P L+ Sbjct 331 VSTSTSSGKSLIYQIPILQSLLEDNQSTAFFVFPTKSLAQDQKKSLIDILSYM--PTLKN 388 Query 321 LLII---GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK----LNLSQVRFLVLDEA- 372 + + G + S++ + +I+ P L + ++ VLDEA Sbjct 389 IRVDTFDGDTPLESRESIIRSA-NIIFTNPDMLHQTILPNANRWYYFFKNLKLFVLDEAH 447 Query 373 --DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 +G+ + + RM +I + + + + + CSAT+ D + +KI Sbjct 448 VYNGIFGVHVAFVLRRMR-RIAEYFGNSQ-YRFVSCSATIE--DPLQHMKKIF------- 496 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 G D++ +++ P K +W + D H D + SEA K Sbjct 497 --GVDNI-KLINYTSSPSGSKKFVMW-----NPPYVDPKHPDDGKKSAI------SEASK 542 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV-CLHGDR 549 +L ++A + ++ I+FCR + C++L + ++Q +KG S + Sbjct 543 LLI-KFAEKRVR------TIVFCRVRKTCESLMR-LVRQELKTKQKGDLLSKIQSYRAGY 594 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 ER++ G + +I T+ GIDI + VI + P N + GR GR Sbjct 595 TVQERRKIESEMFNGKLYGIIATNALELGIDIGSLDAVITIGFPYSLSNLRQQFGRAGRR 654 Query 610 ERMGLAISLVAT 621 + LA+ +V T Sbjct 655 NKSSLAVYIVET 666 >sp|Q8L840|RQL4A_ARATH ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1 Length=1188 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/136 (26%), Positives = 61/136 (45%), Gaps = 12/136 (9%) Query 476 RPGANSPEMWSEAIKILKG--EYAVRAIKEHKMDQA-IIFCRTKIDCDNLEQYFIQQGGG 532 R N P +W + K E + IKE+ D+ II+C +++DC+ + + Sbjct 640 RQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERL------ 693 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 + GH+ HG +P +R ++ K ++ + T GI+ V +VI+ +L Sbjct 694 -QEFGHK--AAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 750 Query 593 PDEKQNYVHRIGRVGR 608 P + Y GR GR Sbjct 751 PKSIEGYHQECGRAGR 766 >sp|Q24498|RYR_DROME Ryanodine receptor OS=Drosophila melanogaster OX=7227 GN=RyR PE=1 SV=3 Length=5127 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/116 (27%), Positives = 55/116 (47%), Gaps = 9/116 (8%) Query 105 GSDGLCCQSREVKEWHGCRATK-----GLMKGKHYYEVSCHDQGLCRVGWSTMQA--SLD 157 G++ L +++ +K + G R + + GK Y+E G RVGW+ Sbjct 1062 GTEALLAEAQRLK-FAGFRTYRVERNYAVTSGKWYFEFEVLTSGPMRVGWARADCYPGAM 1120 Query 158 LGTDKFGFGFGGTG-KKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDL 212 LG++ + F G K H +++G + D IGC++D+ + + FS NG+ L Sbjct 1121 LGSEDTSWAFDGHNVTKMHAGSIEHFGVRYEAGDVIGCFIDVKEQTISFSLNGELL 1176 >sp|Q9PTY5|RANB9_XENLA Ran-binding protein 9 OS=Xenopus laevis OX=8355 GN=ranbp9 PE=2 SV=1 Length=548 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/133 (32%), Positives = 63/133 (47%), Gaps = 15/133 (11%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS--HNKQFDNYG 183 G Y+EV S G +G ST +L+ G DK +G+ G S + YG Sbjct 68 GIFYFEVKIISKGRDGYMGIGLSTQGVNLNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 127 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAE--LKF 240 FT D IGC +++ ++KNG LG+AF ++PP+ L+P L+ + Sbjct 128 PTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAFTDLPPN-----LYPTVGLQTPGEVVDA 182 Query 241 NFGEEEFKFPPKD 253 NFG+ F F +D Sbjct 183 NFGQSPFVFDIED 195 >sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio OX=7955 GN=ranbp10 PE=3 SV=1 Length=604 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 15/133 (11%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS--HNKQFDNYG 183 G +Y+EV S G +G S +++ G DK +G+ G S + YG Sbjct 89 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 148 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAE--LKF 240 FT D IGC +++ ++KNG LG+AF ++PP+ L+P L+ + Sbjct 149 PTFTTGDVIGCCVNLINNTCFYTKNGHSLGVAFTDLPPN-----LYPTVGLQTPGEIVDA 203 Query 241 NFGEEEFKFPPKD 253 NFG++ F F +D Sbjct 204 NFGQQPFVFDIED 216 >sp|Q28FM1|RANB9_XENTR Ran-binding protein 9 OS=Xenopus tropicalis OX=8364 GN=ranbp9 PE=2 SV=1 Length=548 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 42/133 (32%), Positives = 62/133 (47%), Gaps = 15/133 (11%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS--HNKQFDNYG 183 G Y+EV S G +G ST +L G DK +G+ G S + YG Sbjct 68 GIFYFEVKIISKGRDGYMGIGLSTQGVNLSRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 127 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAE--LKF 240 FT D IGC +++ ++KNG LG+AF ++PP+ L+P L+ + Sbjct 128 PTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAFTDLPPN-----LYPTVGLQTPGEVVDA 182 Query 241 NFGEEEFKFPPKD 253 NFG+ F F +D Sbjct 183 NFGQSPFVFDIED 195 >sp|A1L252|RANB9_DANRE Ran-binding protein 9 OS=Danio rerio OX=7955 GN=ranbp9 PE=2 SV=1 Length=597 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 15/133 (11%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS--HNKQFDNYG 183 G +Y+EV S G +G S +++ G DK +G+ G S + YG Sbjct 95 GVYYFEVKIISKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 154 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAE--LKF 240 FT D IGC +++ ++KNG LG+AF ++PP+ L+P L+ + Sbjct 155 PTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPN-----LYPTVGLQTPGEVVDA 209 Query 241 NFGEEEFKFPPKD 253 NFG+ F F +D Sbjct 210 NFGQHPFVFDIED 222 >sp|Q6VN19|RBP10_MOUSE Ran-binding protein 10 OS=Mus musculus OX=10090 GN=Ranbp10 PE=1 SV=2 Length=620 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 13/132 (10%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS--HNKQFDNYG 183 G +Y+EV S G +G S +++ G DK +G+ G S + YG Sbjct 101 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 160 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE--LKFN 241 FT D IGC +++ G ++KNG LG+AF P L+P L+ + N Sbjct 161 PTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLP----ANLYPTVGLQTPGEIVDAN 216 Query 242 FGEEEFKFPPKD 253 FG++ F F +D Sbjct 217 FGQQPFLFDIED 228 >sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens OX=9606 GN=RANBP9 PE=1 SV=1 Length=729 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 15/133 (11%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS--HNKQFDNYG 183 G +Y+EV S G +G S +++ G DK +G+ G S + YG Sbjct 213 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 272 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAE--LKF 240 FT D IGC +++ ++KNG LG+AF ++PP+ L+P L+ + Sbjct 273 PTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPN-----LYPTVGLQTPGEVVDA 327 Query 241 NFGEEEFKFPPKD 253 NFG+ F F +D Sbjct 328 NFGQHPFVFDIED 340 >sp|P69566|RANB9_MOUSE Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1 Length=653 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 15/133 (11%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS--HNKQFDNYG 183 G +Y+EV S G +G S +++ G DK +G+ G S + YG Sbjct 138 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 197 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAE--LKF 240 FT D IGC +++ ++KNG LG+AF ++PP+ L+P L+ + Sbjct 198 PTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPN-----LYPTVGLQTPGEVVDA 252 Query 241 NFGEEEFKFPPKD 253 NFG+ F F +D Sbjct 253 NFGQHPFVFDIED 265 >sp|Q6VN20|RBP10_HUMAN Ran-binding protein 10 OS=Homo sapiens OX=9606 GN=RANBP10 PE=1 SV=1 Length=620 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 13/132 (10%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS--HNKQFDNYG 183 G +Y+EV S G +G S +++ G DK +G+ G S + YG Sbjct 101 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 160 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE--LKFN 241 FT D IGC +++ G ++KNG LG+AF P L+P L+ + N Sbjct 161 PTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLP----ANLYPTVGLQTPGEIVDAN 216 Query 242 FGEEEFKFPPKD 253 FG++ F F +D Sbjct 217 FGQQPFLFDIED 228 >sp|A3KMV8|RBP10_BOVIN Ran-binding protein 10 OS=Bos taurus OX=9913 GN=RANBP10 PE=2 SV=1 Length=620 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 13/132 (10%) Query 131 GKHYYEV---SCHDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS--HNKQFDNYG 183 G +Y+EV S G +G S +++ G DK +G+ G S + YG Sbjct 101 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 160 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE--LKFN 241 FT D IGC +++ G ++KNG LG+AF P L+P L+ + N Sbjct 161 PTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLP----ANLYPTVGLQTPGEIVDAN 216 Query 242 FGEEEFKFPPKD 253 FG++ F F +D Sbjct 217 FGQQPFLFDIED 228 >sp|O34748|RECQ_BACSU ATP-dependent DNA helicase RecQ OS=Bacillus subtilis (strain 168) OX=224308 GN=recQ PE=1 SV=1 Length=591 Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 35/141 (25%), Positives = 63/141 (45%), Gaps = 15/141 (11%) Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH----KMDQAIIFCRTKIDCDNLEQYFI 527 K+NT S E + K++KGE R I E+ + + I++ T+ + D + + Sbjct 194 KENTVYTGFSRENLT--FKVVKGENKDRFIDEYVQNNRHEAGIVYTATRKEADRIYERL- 250 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 K +Q HG RK+ ERF +++ ++ T GID + +V Sbjct 251 --------KRNQVRAGRYHGGLADDVRKEQQERFLNDELQVMVATSAFGMGIDKSNIRFV 302 Query 588 INVTLPDEKQNYVHRIGRVGR 608 ++ +P + ++Y GR GR Sbjct 303 LHAQIPKDMESYYQEAGRAGR 323 >sp|O94712|YC5C_SCHPO Uncharacterized protein C1259.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1259.12c PE=4 SV=2 Length=491 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 57/245 (23%), Positives = 101/245 (41%), Gaps = 45/245 (18%) Query 28 IQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASV 87 I +++PL L G T G+ S P + L++ ++G T T ++ Sbjct 21 INFDNLPLYLQG--------TNYGENVLRSDPRWLKWEKYLREFDMTREGNVT-NTPKAI 71 Query 88 LNKWQMNPYDRGSAFAIGSDGLCC-----------QSREVKEWHGCRATKGLMKGKHYYE 136 + W NP D+ + + ++ + + VK H + + +YYE Sbjct 72 PSSW--NPNDKSDSLELMNNNMGVYFFGPEAGTEHDAASVKADHAIPSNTSI----YYYE 125 Query 137 VSCHDQG--------LCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHN--KQFDNYGEEF 186 + +G CR +MQ + G +G+ G + N K + YG EF Sbjct 126 IQILSRGKEGKMGVGFCR---KSMQTNRLPGCTAESWGYHGNSGEKFNCSKTGEAYGPEF 182 Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKN--AELKFNFGE 244 T D IGC ++ + ++KNG LG+AF+ + L+P LK+ ++ NFG+ Sbjct 183 TTGDIIGCGVNFINRTIFYTKNGAYLGVAFK----KVSDVLYPVIGLKSHGEHVEVNFGQ 238 Query 245 EEFKF 249 F + Sbjct 239 NPFLY 243 >sp|A8WK63|RECQ1_CAEBR Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis briggsae OX=6238 GN=CBG24191 PE=3 SV=1 Length=618 Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 32/115 (28%), Positives = 54/115 (47%), Gaps = 10/115 (9%) Query 495 EYAVRAIK-EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 E VR IK + II+C ++ DC+ L + + G K + H +P + Sbjct 297 EKIVRTIKRKFSGKTGIIYCLSRNDCEKLAKSL--KANGIRAKHY-------HAYMEPVD 347 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 R +++ G+++ ++ T GID V +VI+ +LP +NY GR GR Sbjct 348 RSAAHQKWVSGEIQVIVATVAFGMGIDKPDVRFVIHHSLPKSIENYYQESGRAGR 402 >sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cuniculus OX=9986 GN=RYR1 PE=1 SV=1 Length=5037 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Query 123 RATKG--LMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQ 178 RA K + G+ Y+E G RVGW+ ++ ++LG D+ + F G + + Sbjct 1076 RAEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFNGHRGQRWHLG 1135 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDL 212 + +G + D +GC +D+ + + F+ NG+ L Sbjct 1136 SEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVL 1169 Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 34/63 (54%), Gaps = 6/63 (10%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPAC-VLKNAE--LKFNFGEEEF 247 IGC +D+ G + F+ NGK+ F++ P N LFPA VL + ++F G+++ Sbjct 1515 VIGCLVDLATGLMTFTANGKESNTFFQVEP---NTKLFPAVFVLPTHQNVIQFELGKQKN 1571 Query 248 KFP 250 P Sbjct 1572 IMP 1574 >sp|P16960|RYR1_PIG Ryanodine receptor 1 OS=Sus scrofa OX=9823 GN=RYR1 PE=2 SV=2 Length=5035 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Query 123 RATK--GLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQ 178 RA K + G+ Y+E G RVGW+ ++ ++LG D+ + F G + + Sbjct 1076 RAEKSYAVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFNGHRGQRWHLG 1135 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDL 212 + +G + D +GC +D+ + + F+ NG+ L Sbjct 1136 SELFGRPWQSGDVVGCMIDLTENTIIFTLNGEVL 1169 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 34/63 (54%), Gaps = 6/63 (10%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPAC-VLKNAE--LKFNFGEEEF 247 IGC +D+ G + F+ NGK+ F++ P N LFPA VL + ++F G+++ Sbjct 1515 VIGCLVDLATGLMTFTANGKESNTFFQVEP---NTKLFPAVFVLPTHQNVIQFELGKQKN 1571 Query 248 KFP 250 P Sbjct 1572 IMP 1574 >sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens OX=9606 GN=RYR1 PE=1 SV=3 Length=5038 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/94 (27%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Query 123 RATKG--LMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQ 178 RA K + G+ Y+E G RVGW+ ++ ++LG D+ + F G + + Sbjct 1075 RAEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFNGHRGQRWHLG 1134 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDL 212 + +G + D +GC +D+ + + F+ NG+ L Sbjct 1135 SEPFGRPWQPGDVVGCMIDLTENTIIFTLNGEVL 1168 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 34/63 (54%), Gaps = 6/63 (10%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPAC-VLKNAE--LKFNFGEEEF 247 IGC +D+ G + F+ NGK+ F++ P N LFPA VL + ++F G+++ Sbjct 1514 VIGCLVDLATGLMTFTANGKESNTFFQVEP---NTKLFPAVFVLPTHQNVIQFELGKQKN 1570 Query 248 KFP 250 P Sbjct 1571 IMP 1573 >sp|A7EQ00|SSH4_SCLS1 Protein ssh4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=ssh4 PE=3 SV=1 Length=523 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 57/125 (46%), Gaps = 11/125 (9%) Query 133 HYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YGEE 185 +Y+E +D+ L +G +T L G K+ + TG + +N+ F YG + Sbjct 204 YYWESKIYDKPENTLISIGVATKPYPLFRLPGWHKYSVAYTSTGHRRYNQPFSGPVYGPQ 263 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA-ELKFNFGE 244 + D IG G + F++NGK L ++ +K+Q LFPA + NFG+ Sbjct 264 YVQGDVIGVGYRPRTGTIFFTRNGKKLE---DVAHGLKSQNLFPAVGANGPCTVHVNFGQ 320 Query 245 EEFKF 249 F F Sbjct 321 SGFVF 325 >sp|E9PZQ0|RYR1_MOUSE Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1 Length=5035 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/94 (27%), Positives = 46/94 (49%), Gaps = 4/94 (4%) Query 123 RATK--GLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQ 178 RA K + G+ Y+E G RVGW+ ++ ++LG D + F G + + Sbjct 1077 RAEKSYAVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADDLAYVFNGHRGQRWHLG 1136 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDL 212 + +G + D +GC +D+ + + F+ NG+ L Sbjct 1137 SEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVL 1170 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 34/63 (54%), Gaps = 6/63 (10%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPAC-VLKNAE--LKFNFGEEEF 247 IGC +D+ G + F+ NGK+ F++ P N LFPA VL + ++F G+++ Sbjct 1516 VIGCLVDLATGLMTFTANGKESNTFFQVEP---NTKLFPAVFVLPTHQNVVQFELGKQKN 1572 Query 248 KFP 250 P Sbjct 1573 IMP 1575 >sp|Q75NR7|RECQ4_MOUSE ATP-dependent DNA helicase Q4 OS=Mus musculus OX=10090 GN=Recql4 PE=2 SV=2 Length=1216 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/241 (22%), Positives = 89/241 (37%), Gaps = 33/241 (14%) Query 506 MDQAIIFC-RTKID---------CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 +D II+C R +I C ++ +G GP+ + H ER+ Sbjct 722 LDSVIIYCTRERIQNGWLALLRTCLSMVGDSRPRGCGPEAIAEAY-----HAGMSSQERR 776 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + + F +G +R ++ T G+D V V+++ LP ++YV IGR GR + Sbjct 777 RVQQAFMRGHLRMVVATVAFGMGLDRPDVRAVLHLGLPPSFESYVQAIGRAGRDGKPAHC 836 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 + + E +W R T + +L+ + C+ V Sbjct 837 HLFMHPQGEDLW------------ELRRHAHADSTDFLAVKRLVQRVFPPCTCSQRPVSK 884 Query 676 DIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILA--PTVQELAALEKEAQTSFLHLGYLP 733 V E G+ TY G + GH L TVQ L E+ +T +L P Sbjct 885 SSPEEVKEHSGQQTY----PVLGQACLGHERALPVQSTVQALDMTEEAIETLLCYLELHP 940 Query 734 N 734 Sbjct 941 R 941 >sp|O88700|BLM_MOUSE RecQ-like DNA helicase BLM OS=Mus musculus OX=10090 GN=Blm PE=1 SV=1 Length=1416 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/108 (26%), Positives = 46/108 (43%), Gaps = 10/108 (9%) Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K H D II+C ++ +CD + ++G + + H R + ++ Sbjct 892 KHHPYDSGIIYCLSRRECDTMADTLQREG---------LAALAYHAGLSDSARDEVQHKW 942 Query 562 KKGDVRFLICTDVA-ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 D +IC +A GID V +VI+ +LP + Y GR GR Sbjct 943 INQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGR 990 >sp|A6S3E0|SSH4_BOTFB Protein ssh4 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=ssh4 PE=3 SV=1 Length=537 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 57/125 (46%), Gaps = 11/125 (9%) Query 133 HYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YGEE 185 +Y+E +D+ L +G +T L G K+ + TG + +N+ F YG + Sbjct 218 YYWESKIYDKPENTLISIGVATKPYPLFRLPGWHKYSVAYTSTGHRRYNQPFSGPVYGPQ 277 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA-ELKFNFGE 244 + D IG G + F++NGK L ++ +K+Q LFPA + NFG+ Sbjct 278 YVQGDVIGVGYRPRTGTIFFTRNGKKLE---DVAHGLKSQNLFPAVGANGPCTVHVNFGQ 334 Query 245 EEFKF 249 F F Sbjct 335 SGFVF 339 >sp|A2AGL3|RYR3_MOUSE Ryanodine receptor 3 OS=Mus musculus OX=10090 GN=Ryr3 PE=1 SV=1 Length=4863 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/128 (26%), Positives = 57/128 (45%), Gaps = 9/128 (7%) Query 131 GKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTM 188 GK Y+E G RVGW+ + ++LG D F F G+ + ++ +G + Sbjct 1085 GKWYFEFEVVTGGDMRVGWARPGCRPDIELGADDQAFVFEGSRGQRWHQGSGYFGRTWQP 1144 Query 189 HDTIGCYLDIDKGHVKFSKNGKDL----GLAFEIPPHMKNQALFPACVLKNAEL-KFNFG 243 D +GC +++D + F+ NG+ L G + P C L +++ + N G Sbjct 1145 GDVVGCMINLDDASMVFTLNGELLITNKGSELAFADYEIENGFVPICSLGLSQIGRMNLG 1204 Query 244 EE--EFKF 249 + FKF Sbjct 1205 TDASTFKF 1212 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (55%), Gaps = 6/62 (10%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLK---NAELKFNFGEEEFK 248 IGC LD+ G + FS NGK+LG +++ P N +FPA L+ + +F G+ + Sbjct 1411 IGCLLDLAMGMLSFSANGKELGTCYQVEP---NTKVFPAVFLQPTSTSLFQFELGKLKNA 1467 Query 249 FP 250 P Sbjct 1468 MP 1469 >sp|Q1E2D2|SSH4_COCIM Protein SSH4 OS=Coccidioides immitis (strain RS) OX=246410 GN=SSH4 PE=3 SV=1 Length=494 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (9%) Query 133 HYYEVSCHDQ---GLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YGEE 185 +Y+E +D+ L +G +T L G K + TG + HN+ F YG E Sbjct 217 YYWEAKIYDKPETSLISIGMTTKPYPLFRLPGFHKTSISYQSTGHRRHNQPFTPTLYGPE 276 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA-ELKFNFGE 244 F D +G G + F++NGK L ++ +K+Q FP + NFG+ Sbjct 277 FVQGDVVGVGYRPRSGTIFFTRNGKKLE---DVAHGLKSQNFFPTVGANGPCTVHVNFGQ 333 Query 245 EEFKF 249 F F Sbjct 334 LGFVF 338 >sp|O88838|SPSB2_MOUSE SPRY domain-containing SOCS box protein 2 OS=Mus musculus OX=10090 GN=Spsb2 PE=1 SV=1 Length=264 Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust. Identities = 54/217 (25%), Positives = 92/217 (42%), Gaps = 33/217 (15%) Query 94 NPYDRGSAFAIGSDGLCCQSREVKE-WHGCRATKGLMKGKHYYEVS--CHDQGL-CRVGW 149 NP D + GLC + R V + G R +G +G H +E+S +G VG Sbjct 49 NPKDCSENIDVKEGGLCFERRPVAQSTDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGV 108 Query 150 STMQASLD-------LGTDKFGFGFG-GTGKKSHNK---QFDNY-----GEEFTMHDTIG 193 +T A L LG++ +G+ G GK H + Y GE+ + + + Sbjct 109 ATALAPLQADHYAALLGSNSESWGWDIGRGKLYHQSKGLEAPQYPAGPQGEQLVVPERLL 168 Query 194 CYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNF-GEEEFKFP 250 LD+++G + +S G LG AF +K + L+P + V +++ + GE + P Sbjct 169 VVLDMEEGTLGYSIGGTYLGPAFR---GLKGRTLYPSVSAVWGQCQVRIRYMGERRVEEP 225 Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP 287 + LS+ + G+ ++ Q LP P Sbjct 226 --QSLLHLSR-----LCVRHALGDTRLGQISTLPLPP 255 >sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens OX=9606 GN=RYR3 PE=1 SV=3 Length=4870 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 33/128 (26%), Positives = 56/128 (44%), Gaps = 9/128 (7%) Query 131 GKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTM 188 GK Y+E G RVGW+ + ++LG D F F G + ++ +G + Sbjct 1085 GKWYFEFEVVTGGDMRVGWARPGCRPDVELGADDQAFVFEGNRGQRWHQGSGYFGRTWQP 1144 Query 189 HDTIGCYLDIDKGHVKFSKNGKDL----GLAFEIPPHMKNQALFPACVLKNAEL-KFNFG 243 D +GC +++D + F+ NG+ L G + P C L +++ + N G Sbjct 1145 GDVVGCMINLDDASMIFTLNGELLITNKGSELAFADYEIENGFVPICCLGLSQIGRMNLG 1204 Query 244 EE--EFKF 249 + FKF Sbjct 1205 TDASTFKF 1212 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 21/62 (34%), Positives = 35/62 (56%), Gaps = 6/62 (10%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLK---NAELKFNFGEEEFK 248 IGC +D+ G + FS NGK+LG +++ P+ K +FPA L+ + +F G+ + Sbjct 1411 IGCLVDLAMGMLSFSANGKELGTCYQVEPNTK---VFPAVFLQPTSTSLFQFELGKLKNA 1467 Query 249 FP 250 P Sbjct 1468 MP 1469 >sp|Q5M877|SPSB2_RAT SPRY domain-containing SOCS box protein 2 OS=Rattus norvegicus OX=10116 GN=Spsb2 PE=2 SV=1 Length=264 Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 105/259 (41%), Gaps = 37/259 (14%) Query 54 GAFSIPVIQIVYETLKDQQ--EGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 G+ S P +Y L + E GA + W NP D + GLC Sbjct 9 GSSSTPSSHALYSDLSPPEGLEELLSAPPPDLGAQRHHGW--NPKDCSENIDVKEGGLCF 66 Query 112 QSREVKE-WHGCRATKGLMKGKHYYEVS--CHDQGL-CRVGWSTMQASLD-------LGT 160 + R V + G R +G +G H +E+S +G VG +T A L LG+ Sbjct 67 ERRPVAQSTDGVRGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALLGS 126 Query 161 DKFGFGFG-GTGKKSHNK---QFDNY-----GEEFTMHDTIGCYLDIDKGHVKFSKNGKD 211 + +G+ G GK H + Y GE+ + + + LD+++G + +S G Sbjct 127 NSESWGWDIGRGKLYHQSKGLEAPQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGTY 186 Query 212 LGLAFEIPPHMKNQALFP--ACVLKNAELKFNF-GEEEFKFPPKDGFVALSKAPDGYIVK 268 LG AF +K + L+P + V +++ + GE + P + LS+ + Sbjct 187 LGPAFR---GLKGRTLYPSVSAVWGQCQVRIRYLGERRAEEP--QSLLHLSR-----LCV 236 Query 269 SQHSGNAQVTQTKFLPNAP 287 G+ ++ Q LP P Sbjct 237 RHALGDTRLGQISSLPLPP 255 >sp|Q5M9B1|SPSB3_XENLA SPRY domain-containing SOCS box protein 3 OS=Xenopus laevis OX=8355 GN=spsb3 PE=2 SV=1 Length=360 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 15/119 (13%) Query 123 RATKGLMKGKHYYEVSCHDQGL---CRVGWSTMQASLD---------LGTDKFGFGFGGT 170 R K L +G+H++E+ VG T +LD LG D +G T Sbjct 139 RGNKMLTEGQHFWEIKMTSPVYGTDMMVGIGTSDVNLDKYRHTFCSLLGKDAESWGLSYT 198 Query 171 GKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229 G H N+ F IG +LD G + F KN K +G+A ++N+ LFP Sbjct 199 GLLQHKGDKSNFSSRFGQGSIIGVHLDTWHGVLTFYKNRKRIGVA---ATQLRNKKLFP 254 >sp|Q9TXJ8|RECQ1_CAEEL Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis elegans OX=6239 GN=K02F3.12 PE=3 SV=3 Length=631 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 33/133 (25%), Positives = 57/133 (43%), Gaps = 18/133 (14%) Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 +PG+ E E K +K ++A + II+C ++ DC+ + + Sbjct 311 KPGSED-ECTEEIAKTIKRDFAGQT--------GIIYCLSRNDCEKVAKAL--------- 352 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 K H H +P +R + + G ++ ++ T GID V +VI+ +LP Sbjct 353 KSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKS 412 Query 596 KQNYVHRIGRVGR 608 +NY GR GR Sbjct 413 IENYYQESGRAGR 425 >sp|A1CNW8|SSH4_ASPCL Protein ssh4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=ssh4 PE=3 SV=1 Length=511 Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 11/125 (9%) Query 133 HYYEVSCHDQ---GLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YGEE 185 +Y+E +D+ L VG +T L G K+ + TG + HN+ F + YG Sbjct 223 YYWEAKIYDKPENTLVSVGMTTKPYPLFRLPGFHKYSVAYSSTGHRRHNQPFASTPYGPP 282 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA-ELKFNFGE 244 + D IG G + F++NGK L ++ K Q FP + NFG+ Sbjct 283 LSQGDVIGVGYRPRSGTIFFTRNGKKLE---DVVHAAKTQNFFPTVGANGPCTVHVNFGQ 339 Query 245 EEFKF 249 F F Sbjct 340 MGFVF 344 >sp|P54132|BLM_HUMAN RecQ-like DNA helicase BLM OS=Homo sapiens OX=9606 GN=BLM PE=1 SV=1 Length=1417 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 28/108 (26%), Positives = 46/108 (43%), Gaps = 10/108 (9%) Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K H D II+C ++ +CD + + G + + H R + +++ Sbjct 884 KHHPYDSGIIYCLSRRECDTMADTLQRDG---------LAALAYHAGLSDSARDEVQQKW 934 Query 562 KKGDVRFLICTDVA-ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 D +IC +A GID V +VI+ +LP + Y GR GR Sbjct 935 INQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGR 982 >sp|F4JFJ3|Y3206_ARATH ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02060 PE=2 SV=1 Length=823 Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%) Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI--NVTLPDEKQNYVHRI 603 HG + + ++ +ERF +G ++ LICT++ G+DI +I +V Q Y R Sbjct 513 HGKQYSKQLEETMERFAQGKIKILICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLR- 571 Query 604 GRVGRAER 611 GRVGRA++ Sbjct 572 GRVGRADK 579 >sp|Q9DEY9|BLM_XENLA RecQ-like DNA helicase BLM OS=Xenopus laevis OX=8355 GN=blm PE=2 SV=1 Length=1364 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/108 (27%), Positives = 45/108 (42%), Gaps = 10/108 (9%) Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K H D II+C ++ +CD + ++G + + H R ++ Sbjct 836 KHHPNDSGIIYCLSRHECDTMADTLQKEG---------LAALAYHAGLADSNRDYVQHKW 886 Query 562 KKGDVRFLICTDVA-ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 D +IC +A GID V YVI+ +LP + Y GR GR Sbjct 887 INQDDCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGR 934 >sp|Q28DT9|SPSB3_XENTR SPRY domain-containing SOCS box protein 3 OS=Xenopus tropicalis OX=8364 GN=spsb3 PE=2 SV=1 Length=360 Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/119 (29%), Positives = 50/119 (42%), Gaps = 15/119 (13%) Query 123 RATKGLMKGKHYYEVSCHDQGL---CRVGWSTMQASLD---------LGTDKFGFGFGGT 170 R + L +G+H++E+ VG T +LD LG D +G T Sbjct 139 RGNRMLTEGQHFWEIKMTSPVYGTDMMVGIGTSDVNLDKYRHTFCSLLGKDAESWGLSYT 198 Query 171 GKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229 G H N+ F IG +LD G + F KN K +G+A ++N+ LFP Sbjct 199 GLLQHKGDKSNFSSRFGQGSIIGVHLDTWHGVLTFYKNRKCIGVA---ATQLRNKKLFP 254 >sp|Q05549|HRQ1_YEAST ATP-dependent helicase HRQ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HRQ1 PE=1 SV=1 Length=1077 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 98/442 (22%), Positives = 165/442 (37%), Gaps = 75/442 (17%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 S+ K GL FE+ P E+ E F D +L + + Sbjct 266 SRTAKYKGLCFELAP----------------EVYQGMEHENFYSHQADAINSLHQGENVI 309 Query 266 IVKSQHSGNA---QVTQTKFLPNAPKA--LIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 I S SG + Q+ L P++ + + P++ LA+ K I P+L+ Sbjct 310 ITTSTSSGKSLIYQLAAIDLLLKDPESTFMYIFPTKALAQDQKRAFKVILSKI--PELKN 367 Query 321 LLI--IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEA-- 372 ++ G ++ + + ++ P + + N L ++ +V+DE Sbjct 368 AVVDTYDGDTEPEERAYIRKNARVIFTNPDMIHTSILPNHANWRHFLYHLKLVVVDELHI 427 Query 373 -DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 GL + + R+ ++ + LQ I CSATL S V+ + K M V L Sbjct 428 YKGLFGSHVALVMRRLL-RLCHCFYENSGLQFISCSATLKS-PVQHM--KDMFGINEVTL 483 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 ED P H+VV NP ER ++ IR E+ KI Sbjct 484 IHEDGSPTGAKHLVV-WNPPILPQHERKRENFIR---------------------ESAKI 521 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL----EQYFIQQGGGPDKKGHQFSCVCLHG 547 L V+ I + + I FC + C+ L FI+ G ++ + G Sbjct 522 L-----VQLILNNV--RTIAFCYVRRVCELLMKEVRNIFIETG----REDLVTEVMSYRG 570 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 +R++ G+++ +I T+ GIDI G+ V+ P N+ + GR G Sbjct 571 GYSASDRRKIEREMFHGNLKAVISTNALELGIDIGGLDAVLMCGFPLSMANFHQQSGRAG 630 Query 608 RAERMGLAISLVATEKEKVWYH 629 R R +++LV V H Sbjct 631 R--RNNDSLTLVVASDSPVDQH 650 >sp|G5EFZ3|ASH2_CAEEL Set1/Ash2 histone methyltransferase complex subunit ash-2 OS=Caenorhabditis elegans OX=6239 GN=ash-2 PE=1 SV=1 Length=570 Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust. Identities = 32/87 (37%), Positives = 45/87 (52%), Gaps = 9/87 (10%) Query 123 RATKGLMKGKHYYEVSCHDQ---GLCRVGWSTMQASLD--LGTDKFGFGFGGT-GKKSHN 176 RA+ G+ KG Y+EV+ DQ R+GWS ASL +G +KF +G+ G K H Sbjct 329 RASHGVSKGTWYFEVNFDDQPDDSHIRIGWSQSYASLQACVGYNKFSYGWRSKHGTKFHE 388 Query 177 KQFDNYG-EEFTMHDTIGC--YLDIDK 200 + Y F D +GC +L +DK Sbjct 389 AKGKKYHFGGFKQGDVLGCLIHLPVDK 415 >sp|Q9FT70|RQL4B_ARATH ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana OX=3702 GN=RECQL4B PE=2 SV=1 Length=1150 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 12/136 (9%) Query 476 RPGANSPEMWSEAIKILKG--EYAVRAIKEHKMDQA-IIFCRTKIDCDNLEQYFIQQGGG 532 R N P +W + E + I+E+ D+ II+C +++DC+ + + Sbjct 656 RQSFNRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEAL------ 709 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 GH+ HG P +R +++ K ++ + T GI+ V +VI+ +L Sbjct 710 -RVFGHK--AAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 766 Query 593 PDEKQNYVHRIGRVGR 608 P + Y GR GR Sbjct 767 PKSIEGYHQECGRAGR 782 >sp|Q0WVW7|RQL5_ARATH ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana OX=3702 GN=RECQL5 PE=2 SV=2 Length=911 Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust. Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 9/104 (9%) Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 I++C+ + + D + +Y + + KG+ H +R + E F +R + Sbjct 490 IVYCKFQYETDMISKYL--RDNNINAKGY-------HSGLPAKDRVRIQESFCSNKIRVV 540 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 + T G+D V VI+ ++P + YV IGR GR R+ Sbjct 541 VATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLS 584 >sp|Q99619|SPSB2_HUMAN SPRY domain-containing SOCS box protein 2 OS=Homo sapiens OX=9606 GN=SPSB2 PE=1 SV=1 Length=263 Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust. Identities = 61/258 (24%), Positives = 103/258 (40%), Gaps = 36/258 (14%) Query 54 GAFSIPVIQIVYETLK--DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 G+ S P Q +Y L + E GA + W NP D + GL Sbjct 9 GSSSTPTPQALYPDLSCPEGLEELLSAPPPDLGAQRRHGW--NPKDCSENIEVKEGGLYF 66 Query 112 QSREVKE-WHGCRATKGLMKGKHYYEVS--CHDQGL-CRVGWSTMQASLD-------LGT 160 + R V + G R +G +G H +E+S +G VG +T A L LG+ Sbjct 67 ERRPVAQSTDGARGKRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQTDHYAALLGS 126 Query 161 DKFGFGFG-GTGKKSHNKQ--------FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKD 211 + +G+ G GK H + GE+ + + + LD+++G + ++ G Sbjct 127 NSESWGWDIGRGKLYHQSKGPGAPQYPAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTY 186 Query 212 LGLAFEIPPHMKNQALFPA--CVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 LG AF +K + L+PA V +++ + E P + LS+ + Sbjct 187 LGPAFR---GLKGRTLYPAVSAVWGQCQVRIRYLGERRAEP--HSLLHLSR-----LCVR 236 Query 270 QHSGNAQVTQTKFLPNAP 287 + G+ ++ Q LP P Sbjct 237 HNLGDTRLGQVSALPLPP 254 >sp|F4INA9|RECG_ARATH ATP-dependent DNA helicase homolog RECG, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RECG PE=3 SV=1 Length=973 Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 42/78 (54%), Gaps = 1/78 (1%) Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 KK +++C LHG K ++++ L +F+ G+ + L+ T V G+D+ ++ + Sbjct 792 KKFPKYNCGLLHGRMKSDDKEEALNKFRSGETQILLSTQVIEIGVDVPDASMMVVMNAER 851 Query 595 EKQNYVHRI-GRVGRAER 611 +H++ GRVGR R Sbjct 852 FGIAQLHQLRGRVGRGTR 869 >sp|Q6FJJ8|MRH4_CANGA ATP-dependent RNA helicase MRH4, mitochondrial OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=MRH4 PE=3 SV=1 Length=568 Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust. Identities = 29/95 (31%), Positives = 50/95 (53%), Gaps = 12/95 (13%) Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDL-----VSTGKLNLSQVRFLVLDEADGLLSQGY 380 GV + L L++ DI++ TP +L L +S L L ++ F+VLDEAD LL + + Sbjct 247 GVDYQQLLENLKSRTDILITTPSKLLSLQRVRMISRADLILKRIEFVVLDEADTLLDKSW 306 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATL-HSFD 414 + ++ + V +++CSAT+ + FD Sbjct 307 LEDTHKALKAMSDVN------HLVLCSATIPNEFD 335 Score = 41.6 bits (96), Expect = 0.027, Method: Compositional matrix adjust. Identities = 21/62 (34%), Positives = 34/62 (55%), Gaps = 1/62 (2%) Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +R L+ TD+ ARG++ GV VI +P + VHR GR R + G + ++ +K + Sbjct 493 LRVLVTTDLLARGLNFKGVRNVILYDVPITAIDLVHRAGRTARMRQSG-RVFMIIDKKTQ 551 Query 626 VW 627 W Sbjct 552 SW 553 >sp|O94761|RECQ4_HUMAN ATP-dependent DNA helicase Q4 OS=Homo sapiens OX=9606 GN=RECQL4 PE=1 SV=2 Length=1208 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 11/111 (10%) Query 506 MDQAIIFCRTKIDCDN--------LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 +D II+C + D + L ++ GG + + + H ER++ Sbjct 700 LDSIIIYCNRREDTERIAALLRTCLHAAWVPGSGG---RAPKTTAEAYHAGMCSRERRRV 756 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 F +G +R ++ T G+D V V+++ LP ++YV +GR GR Sbjct 757 QRAFMQGQLRVVVATVAFGMGLDRPDVRAVLHLGLPPSFESYVQAVGRAGR 807 >sp|P15043|RECQ_ECOLI ATP-dependent DNA helicase RecQ OS=Escherichia coli (strain K12) OX=83333 GN=recQ PE=1 SV=5 Length=609 Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/111 (21%), Positives = 49/111 (44%), Gaps = 9/111 (8%) Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 +R ++E + II+C ++ ++ +G S H + + R Sbjct 228 MRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKG---------ISAAAYHAGLENNVRADV 278 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 E+F++ D++ ++ T GI+ V +V++ +P ++Y GR GR Sbjct 279 QEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGR 329 >sp|Q9I920|BLM_CHICK RecQ-like DNA helicase BLM OS=Gallus gallus OX=9031 GN=BLM PE=1 SV=2 Length=1183 Score = 42.0 bits (97), Expect = 0.021, Method: Compositional matrix adjust. Identities = 29/113 (26%), Positives = 46/113 (41%), Gaps = 10/113 (9%) Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K H D II+C ++ +CD ++G + + H R +++ Sbjct 655 KYHPHDSGIIYCLSRHECDTTAAILQKEG---------LAALAYHAGLTDSNRDLVQKKW 705 Query 562 KKGDVRFLICTDVA-ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 + +IC +A GID V YVI+ +LP + Y GR GR M Sbjct 706 VNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMS 758 >sp|Q5N870|DCL3A_ORYSJ Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica OX=39947 GN=DCL3A PE=2 SV=1 Length=1651 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 38/138 (28%), Positives = 57/138 (41%), Gaps = 22/138 (16%) Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 + G SP+++ E I+I + + + +IF KI +++ K Sbjct 392 KTGYISPKLY-ELIQIF------HSFSNSRHARCLIFVDRKITARVIDRMI-------KK 437 Query 536 KGH--QFSCVCLHGDRK------PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 GH F+ L G R P +K L+ F+ G V L TDVA GI + V Sbjct 438 IGHLAHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFTTDVAEEGIHVPECSCV 497 Query 588 INVTLPDEKQNYVHRIGR 605 I LP ++YV GR Sbjct 498 IRFDLPRTTRSYVQSRGR 515 >sp|Q96A44|SPSB4_HUMAN SPRY domain-containing SOCS box protein 4 OS=Homo sapiens OX=9606 GN=SPSB4 PE=1 SV=1 Length=273 Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust. Identities = 51/224 (23%), Positives = 94/224 (42%), Gaps = 32/224 (14%) Query 48 TGSGKTGAFSIPVIQIVYETLKDQQEGKKGKT-----TIKTGASVLNKWQMNPYDRG-SA 101 +GS K+ P ++ L+ + G+ + G +V + NP DR + Sbjct 6 SGSLKSVEVREPALRPAKRELRGAEPGRPARLDQLLDMPAAGLAVQLRHAWNPEDRSLNV 65 Query 102 FAIGSDGLCCQSREVKE-WHGCRATKGLMKGKHYYEVS--CHDQGL-CRVGWSTMQASLD 157 F D L V + G R G +G H ++++ +G VG +T +A L Sbjct 66 FVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQINWPARQRGTHAVVGVATARAPLH 125 Query 158 -------LGTDKFGFGFG-GTGKKSHNKQ---------FDNYGEEFTMHDTIGCYLDIDK 200 +G+D +G+ G + H+ + F E F + D++ LD+D+ Sbjct 126 SVGYTALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGPDEAFALPDSLLVVLDMDE 185 Query 201 GHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNF 242 G + F +G+ LG+AF +K + L+P + V + E+ + Sbjct 186 GTLSFIVDGQYLGVAFR---GLKGKKLYPVVSAVWGHCEVTMRY 226 >sp|Q9TS33|RYR3_RABIT Ryanodine receptor 3 OS=Oryctolagus cuniculus OX=9986 GN=RYR3 PE=1 SV=1 Length=4872 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 21/62 (34%), Positives = 34/62 (55%), Gaps = 6/62 (10%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLK---NAELKFNFGEEEFK 248 IGC +D+ G + FS NGK+LG +++ P N +FPA L+ + +F G+ + Sbjct 1411 IGCLVDLAMGMLSFSANGKELGTCYQVEP---NTKVFPAVFLQPTSTSLFQFELGKLKNA 1467 Query 249 FP 250 P Sbjct 1468 MP 1469 Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 9/128 (7%) Query 131 GKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTM 188 GK Y+E G RVGW+ + ++LG G K G + Sbjct 1085 GKWYFEFEVVTGGDMRVGWARPGCRPDIELGPMTKPLCLKAAGASVGTKVVGILGVPWQP 1144 Query 189 HDTIGCYLDIDKGHVKFSKNGKDL----GLAFEIPPHMKNQALFPACVLKNAEL-KFNFG 243 D +GC +++D + F+ NG+ L G + P C L +++ + N G Sbjct 1145 GDVVGCMINLDDASMIFTLNGELLITNKGSELAFADYEIENGFVPICSLGLSQIGRMNLG 1204 Query 244 EE--EFKF 249 + FKF Sbjct 1205 TDASTFKF 1212 >sp|Q2VPA6|HELQ_MOUSE Helicase POLQ-like OS=Mus musculus OX=10090 GN=Helq PE=1 SV=2 Length=1069 Score = 41.2 bits (95), Expect = 0.038, Method: Compositional matrix adjust. Identities = 67/297 (23%), Positives = 115/297 (39%), Gaps = 67/297 (23%) Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT 409 ++ L+ T +L S + +V+DE ++ +G I M + +V K Q+I SAT Sbjct 404 VNALIETSRL--STLGLVVVDELH-MIGEGSRGAILEM--TLAKVLYTSKTTQIIGMSAT 458 Query 410 LHSFDVKKLSEKIMHFPTW---VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 L++ + + K ++ + V+LK V DT++ V Sbjct 459 LNNVEDLQAFLKAEYYTSQFRPVELKEFLKVNDTIYEV---------------------- 496 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA-IIFCRTKIDCDNLEQY 525 D A D +SEA+K + + V + E + + ++FC +K +C+N+ + Sbjct 497 -DSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVIPNYSCLVFCPSKKNCENVAEM 555 Query 526 ---FIQQ--------------------GGGPD----KKGHQFSCVCLHGDRKPHERKQNL 558 F+ + G G K+ F H ERK Sbjct 556 LCKFLSKDYLNHREKEKCEVIKSLRNIGNGKVCPVLKRTVPFGIAYHHSGLTSEERKLLE 615 Query 559 ERFKKGDVRFLICTDVAARGIDIHG------VPYVINVTLPDEKQNYVHRIGRVGRA 609 E + G + L CT A G+++ PYV N L ++ Y +GR GRA Sbjct 616 EAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFL--KRNQYKQMVGRAGRA 670 >sp|Q9BQ75|CMS1_HUMAN Protein CMSS1 OS=Homo sapiens OX=9606 GN=CMSS1 PE=1 SV=2 Length=279 Score = 40.4 bits (93), Expect = 0.042, Method: Compositional matrix adjust. Identities = 21/45 (47%), Positives = 30/45 (67%), Gaps = 1/45 (2%) Query 327 VAARDQLSVLENGV-DIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 + + Q+ +LE V + VGTPGR+ +LV G LNLS ++FLV D Sbjct 192 IKVQAQVKLLEKRVVHLGVGTPGRIKELVKQGGLNLSPLKFLVFD 236 >sp|Q9CL21|RECQ_PASMU ATP-dependent DNA helicase RecQ OS=Pasteurella multocida (strain Pm70) OX=272843 GN=recQ PE=3 SV=1 Length=632 Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust. Identities = 29/135 (21%), Positives = 55/135 (41%), Gaps = 10/135 (7%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E R + K II+C ++ + + + +G S H + +R Sbjct 238 EQLCRFVLGQKGKSGIIYCNSRSKVERIAESLRNKG---------VSAQAYHAGLETSQR 288 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 +Q F++ +V+ ++ T GI+ V +V++ LP ++Y GR GR + Sbjct 289 EQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAE 348 Query 615 AISLVATEKEKVWYH 629 A+ L + W H Sbjct 349 AV-LFYEPADYAWLH 362 >sp|Q8R5F7|IFIH1_MOUSE Interferon-induced helicase C domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ifih1 PE=1 SV=1 Length=1025 Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust. Identities = 34/137 (25%), Positives = 60/137 (44%), Gaps = 6/137 (4%) Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK--K 536 A +P+ +E + L+ + + + + IIF +T+ L Q+ ++ + K Sbjct 691 AENPKYENEKLIKLRNTILEQFTRSEESSRGIIFTKTRQSTYALSQWIMENAKFAEVGVK 750 Query 537 GHQFSCVCLHGDRKPH---ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP 593 H + KP E+K+ + +F+ G++ LI T VA G+DI VI L Sbjct 751 AHHLIGAGHSSEVKPMTQTEQKEVISKFRTGEINLLIATTVAEEGLDIKECNIVIRYGLV 810 Query 594 DEKQNYVHRIGRVGRAE 610 + V GR RA+ Sbjct 811 TNEIAMVQARGR-ARAD 826 >sp|Q9BYX4|IFIH1_HUMAN Interferon-induced helicase C domain-containing protein 1 OS=Homo sapiens OX=9606 GN=IFIH1 PE=1 SV=3 Length=1025 Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust. Identities = 35/137 (26%), Positives = 59/137 (43%), Gaps = 6/137 (4%) Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK--K 536 A +PE +E + L+ + + + + IIF +T+ L Q+ + + K Sbjct 691 AENPEYENEKLTKLRNTIMEQYTRTEESARGIIFTKTRQSAYALSQWITENEKFAEVGVK 750 Query 537 GHQFSCVCLHGDRKP---HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP 593 H + KP +E+K+ + +F+ G + LI T VA G+DI VI L Sbjct 751 AHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDIKECNIVIRYGLV 810 Query 594 DEKQNYVHRIGRVGRAE 610 + V GR RA+ Sbjct 811 TNEIAMVQARGR-ARAD 826 >sp|Q8R5B6|SPSB4_MOUSE SPRY domain-containing SOCS box protein 4 OS=Mus musculus OX=10090 GN=Spsb4 PE=1 SV=1 Length=273 Score = 40.0 bits (92), Expect = 0.056, Method: Compositional matrix adjust. Identities = 51/224 (23%), Positives = 93/224 (42%), Gaps = 32/224 (14%) Query 48 TGSGKTGAFSIPVIQIVYETLKDQQEGKKGKT-----TIKTGASVLNKWQMNPYDRG-SA 101 +GS K+ P ++ L+ + G+ + G +V + NP DR + Sbjct 6 SGSLKSVEVREPALRPAKRELRGLEPGRPARLDQLLDMPAAGLAVQLRHAWNPEDRSLNV 65 Query 102 FAIGSDGLCCQSREVKE-WHGCRATKGLMKGKHYYEV--SCHDQGL-CRVGWSTMQASLD 157 F D L V + G R G +G H +++ +G VG +T +A L Sbjct 66 FVKDDDRLTFHRHPVAQSTDGIRGKVGHARGLHAWQIHWPARQRGTHAVVGVATARAPLH 125 Query 158 -------LGTDKFGFGFG-GTGKKSHNKQ---------FDNYGEEFTMHDTIGCYLDIDK 200 +G+D +G+ G + H+ + F E F + D++ LD+D+ Sbjct 126 SVGYTALVGSDSESWGWDLGRSRLYHDGKNRPGVAYPAFLGPDEAFALPDSLLVVLDMDE 185 Query 201 GHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNF 242 G + F +G+ LG+AF +K + L+P + V + E+ + Sbjct 186 GTLSFIVDGQYLGVAFR---GLKGKKLYPVVSAVWGHCEVTMRY 226 >sp|O09053|WRN_MOUSE Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3 Length=1401 Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 33/69 (48%), Gaps = 0/69 (0%) Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 +C H K ERK RF + +++ ++ T GI+ + VI+ P E ++Y Sbjct 754 LACRTYHAGMKISERKDVHHRFLRDEIQCVVATVAFGMGINKADIRKVIHYGAPKEMESY 813 Query 600 VHRIGRVGR 608 IGR GR Sbjct 814 YQEIGRAGR 822 >sp|P85199|RH3_HELAN DEAD-box ATP-dependent RNA helicase 3 (Fragment) OS=Helianthus annuus OX=4232 PE=1 SV=1 Length=234 Score = 39.7 bits (91), Expect = 0.064, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 45/78 (58%), Gaps = 4/78 (5%) Query 3 AFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 A S +G+ ++ + +E+ + L P IQ + L G D++ A+TG+GKT AF+IP+ Sbjct 121 AVSRLGLPQKLVETLEKRGITKLFP--IQRAVLVPALEGRDIIGRAKTGTGKTLAFAIPI 178 Query 61 IQIVYETLKDQQEGKKGK 78 I+ + E +D + G+ Sbjct 179 IKRLTEEDEDNRNSLAGR 196 Score = 33.5 bits (75), Expect = 5.9, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 25/42 (60%), Gaps = 5/42 (12%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 P+ L++ P+RELA+Q IK+ P LR + + GGV+ Sbjct 198 PRVLVLAPTRELAKQVETEIKE-----PAPYLRTVCVYGGVS 234 >sp|Q75AA7|MPH1_EREGS ATP-dependent DNA helicase MPH1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MPH1 PE=3 SV=2 Length=1077 Score = 40.4 bits (93), Expect = 0.074, Method: Compositional matrix adjust. Identities = 22/68 (32%), Positives = 36/68 (53%), Gaps = 1/68 (1%) Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ++K+ + FKKGD L+CT + G+DI V +I + R+GR GR +R Sbjct 560 QQKEVISLFKKGDYNVLVCTSIGEEGLDIGEVDMIICYDTTSSPIKNIQRMGRTGR-KRD 618 Query 613 GLAISLVA 620 G + L++ Sbjct 619 GRIVLLLS 626 >sp|P58174|UVRB_MYCPU UvrABC system protein B OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=uvrB PE=3 SV=1 Length=657 Score = 40.0 bits (92), Expect = 0.075, Method: Compositional matrix adjust. Identities = 31/111 (28%), Positives = 51/111 (46%), Gaps = 15/111 (14%) Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 K ++ +I TK + L +YF ++G +H D K ER + L + +KG Sbjct 442 KNERTLILTTTKRFSEELTRYFQEKGE---------KVAYIHSDHKTFERNEILRKLRKG 492 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR----IGRVGRAER 611 +I ++ GID+ V VI L +K++++ I VGRA R Sbjct 493 VYDLVIGINLLREGIDLPEVSLVI--ILDADKESFLRNTKSLIQIVGRASR 541 >sp|Q58969|Y1574_METJA Uncharacterized ATP-dependent helicase MJ1574 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1574 PE=3 SV=1 Length=684 Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 11/143 (8%) Query 490 KILKGEYAVRAIKEHKMD---QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 K L + +R + E+ +D + ++F T+ + + L ++ + K ++ S Sbjct 257 KNLDNKQLLRRLIENLVDNNIKTLVFFDTRKETEKLMRFLLNS-----KVFYKLSTY--K 309 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL-PDEKQNYVHRIGR 605 G + R++ E+FK G++ L+ T+ GIDI + VIN + PD + + R GR Sbjct 310 GTLPKYVREEIEEKFKNGEILALLTTNALELGIDIGDLDAVINYGIPPDGIFSLIQRFGR 369 Query 606 VGRAERMGLAISLVATEKEKVWY 628 GR ++ L I ++ + +Y Sbjct 370 AGRRDKEALNIIVLRKDGLDYYY 392 >sp|Q9ZJ57|MFD_HELPJ Transcription-repair-coupling factor OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=mfd PE=3 SV=1 Length=1001 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 24/90 (27%), Positives = 43/90 (48%), Gaps = 9/90 (10%) Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + LH +E ++ + F KG+ + L+CT + GI + N + D QN Sbjct 717 KLKIAILHSQINANESEEIMLEFAKGNYQVLLCTSIVESGIHLPNA----NTIIIDNAQN 772 Query 599 Y----VHRI-GRVGRAERMGLAISLVATEK 623 + +H++ GRVGR ++ G L+ +K Sbjct 773 FGLADLHQLRGRVGRGKKEGFCYFLIEDQK 802 >sp|O26066|MFD_HELPY Transcription-repair-coupling factor OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=mfd PE=3 SV=1 Length=999 Score = 40.4 bits (93), Expect = 0.080, Method: Compositional matrix adjust. Identities = 24/90 (27%), Positives = 43/90 (48%), Gaps = 9/90 (10%) Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + LH +E ++ + F KG+ + L+CT + GI + N + D QN Sbjct 715 KLKIAILHSQINANESEEIMLEFAKGNYQVLLCTSIVESGIHLPNA----NTIIIDNAQN 770 Query 599 Y----VHRI-GRVGRAERMGLAISLVATEK 623 + +H++ GRVGR ++ G L+ +K Sbjct 771 FGLADLHQLRGRVGRGKKEGFCYFLIEDQK 800 >sp|Q58900|Y1505_METJA Putative ATP-dependent RNA helicase MJ1505 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1505 PE=3 SV=2 Length=778 Score = 40.0 bits (92), Expect = 0.081, Method: Compositional matrix adjust. Identities = 26/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (5%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K LI+ PSR L EQ N +KQ ID K+ + + G + + + + + G I + TP Sbjct 59 KVLILAPSRPLVEQHYNRLKQVLN-IDEDKI--IALTGKIQPKKRAELYKKG-KIFIATP 114 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEA 372 +++ + G++N+ + L+ DEA Sbjct 115 QVIENDIIAGRINVDEFILLIADEA 139 Score = 37.0 bits (84), Expect = 0.74, Method: Compositional matrix adjust. Identities = 33/118 (28%), Positives = 54/118 (46%), Gaps = 19/118 (16%) Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQG-------GGPDKKGHQFSCVCLHGDRKPHE 553 ++++K ++ IIF + + + + Q G G +K+G S E Sbjct 347 LEKNKDERIIIFAQYRDTVEKIVNLLTQNGIKAIRFIGQANKEGKGMS---------QKE 397 Query 554 RKQNLERFKK-GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 + + +ERFKK G V L+ T V+ GIDI V Y+I + ++ R GR R E Sbjct 398 QIEAIERFKKEGSV--LVSTSVSEEGIDIPSVNYIIFYEPVPSEIRFIQRRGRAMRGE 453 >sp|Q9VGI8|BLM_DROME RecQ-like DNA helicase Blm OS=Drosophila melanogaster OX=7227 GN=Blm PE=1 SV=1 Length=1487 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 9/99 (9%) Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 II+C ++ +CD + + G V H +R+ + + G +R + Sbjct 962 IIYCLSRKECDETSKKMCKDG---------VRAVSYHAGLTDTDRESRQKDWLTGKMRVI 1012 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 T GID V +V++ +LP + Y GR GR Sbjct 1013 CATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGR 1051 >sp|A7LFZ6|DCL4_ORYSJ Endoribonuclease Dicer homolog 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL4 PE=2 SV=1 Length=1657 Score = 40.4 bits (93), Expect = 0.084, Method: Compositional matrix adjust. Identities = 70/309 (23%), Positives = 115/309 (37%), Gaps = 45/309 (15%) Query 334 SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGL-------LSQGYSDFIN- 385 SV ++ VV +P ++ G +N S + + + E D L L DF + Sbjct 251 SVDNEELESVVASPDM--EVYFYGPVNHSNLTTICIKELDSLKLQSERMLRASLCDFKDS 308 Query 386 --------RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 R+H I + + + T SFD KL + VDL G S Sbjct 309 QKKLKSLWRLHENIIFCLQELGSFGALQAARTFLSFDGDKLDRR------EVDLNG--ST 360 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 HH + N T L S +TD HA P +S +L + Sbjct 361 SSFAHHYL---NGATSIL------SRNKTDGSHAGSFDLEKLEEP-FFSNKFSVLINVLS 410 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 ++E+ + I+F + +I +Q + +F C G + K + Sbjct 411 RYGLQENM--KCIVFVK-RITVARAISNILQNLKCLEFWKCEFLVGCHSGSKNMSRNKMD 467 Query 558 --LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 ++RF G+V L+ T V G+DI V+ LP+ +++ GR RM + Sbjct 468 AIVQRFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRA----RMTKS 523 Query 616 ISLVATEKE 624 +V E+E Sbjct 524 KYVVLLERE 532 >sp|P35187|SGS1_YEAST ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SGS1 PE=1 SV=1 Length=1447 Score = 40.0 bits (92), Expect = 0.085, Method: Compositional matrix adjust. Identities = 27/110 (25%), Positives = 45/110 (41%), Gaps = 10/110 (9%) Query 500 AIKEHKMDQA-IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 A+K +Q II+C +K C+ + G C H +P ER Sbjct 893 AVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNG---------IKCAYYHAGMEPDERLSVQ 943 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + ++ +++ + T GID V +V + T+P + Y GR GR Sbjct 944 KAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGR 993 >sp|P54509|YQHH_BACSU Uncharacterized ATP-dependent helicase YqhH OS=Bacillus subtilis (strain 168) OX=224308 GN=yqhH PE=3 SV=1 Length=557 Score = 40.0 bits (92), Expect = 0.089, Method: Compositional matrix adjust. Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 16/193 (8%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 D+ IIF + L Q+F+QQ G S V G K +K ++ +G + Sbjct 373 DKVIIFTEYRATQIYL-QWFLQQNG--------ISSVPFRGGFK-RGKKDWMKDLFRGKI 422 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR-AERMGLAISLVATEKEK 625 + LI T+ GI++ ++IN LP RIGR+ R + + I +AT K Sbjct 423 QVLIATEAGGEGINLQFCNHMINYDLPWNPMRLEQRIGRIHRLGQERDVHIYNMAT-KHT 481 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI--SQVEPDIKVPVDE 683 V H+ + + K G ++Q ++ EEHL+ + S E ++K+ +D Sbjct 482 VEEHILKLLYEKIHLFE-KVVGELDDILTKIQ-VNNFEEHLHDILYHSATEEEMKIKMDN 539 Query 684 FDGKVTYGQKRAA 696 ++Y ++ A Sbjct 540 LTSFLSYKKQLPA 552 >sp|P40724|RECQ_SALTY ATP-dependent DNA helicase RecQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=recQ PE=3 SV=3 Length=609 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 23/111 (21%), Positives = 48/111 (43%), Gaps = 9/111 (8%) Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 +R ++E + II+C ++ ++ +G S H + R Sbjct 228 MRYVQEQRGKSGIIYCNSRAKVEDTAARLQSRG---------ISAAAYHAGLENAIRVDV 278 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 E+F++ D++ ++ T GI+ V +V++ +P ++Y GR GR Sbjct 279 QEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGR 329 >sp|Q5XJK9|CMS1_DANRE Protein CMSS1 OS=Danio rerio OX=7955 GN=cmss1 PE=2 SV=1 Length=291 Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 9/100 (9%) Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD-IVVGTPGRLDDLVSTG 357 A +T++ IKQ + K+ +L + +Q+ L GV I VGTPGR+ L+ Sbjct 177 ALRTIDLIKQLVTFKGQAKVLKLFA-KHIKVEEQIKSLSKGVTHIAVGTPGRICALLEKE 235 Query 358 KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 L + +R+LVLD Y D R +P+V D Sbjct 236 GLTVQGLRYLVLD-------WNYRDQKQRRMVDVPEVKGD 268 >sp|Q652L2|HIRA_ORYSJ Protein HIRA OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0567700 PE=2 SV=1 Length=975 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 66/281 (23%), Positives = 105/281 (37%), Gaps = 30/281 (11%) Query 68 LKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKG 127 L Q+ K GAS + + PY+ AIGS Q R + W A + Sbjct 278 LSSGQDAKAAPAGWANGASKASSKEHQPYN---VIAIGS-----QDRTITVWTTASA-RP 328 Query 128 LMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD-----NY 182 L KH++ S D G+S SLD F F G + + + D Y Sbjct 329 LFVAKHFFTQSVVDLSWSPDGYSLFACSLDGSVATFHFEAKELGYRLRDAELDELKKNRY 388 Query 183 GEEFTMHDTIG---CYLDIDKGHVKFSKNGKDLGL-AFEIPPHMKNQALFPACVLKNAEL 238 G+ I L +++ K S + K + F+ PP + A P+ + N + Sbjct 389 GDVRGRQSNIAESPAQLLLEEASAKQSASKKVSSVQQFQSPPKVSTDAPNPSTSVPNQKA 448 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF-LPNAPKALIVEPSRE 297 E+E K A S A D + ++ V Q ++ P+ K +I E Sbjct 449 PEALPEDEKK-------TAGSTADD---INKAPRLSSPVKQREYRRPDGRKRIIPEAVGF 498 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + Q ++N Q + +D L + +I+G R S N Sbjct 499 PSNQDMSNRSQ-NQGVDFSSLDQRMILGENGTRPSYSASGN 538 >sp|Q9UT23|MPH1_SCHPO ATP-dependent DNA helicase fml1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fml1 PE=1 SV=2 Length=834 Score = 39.7 bits (91), Expect = 0.10, Method: Compositional matrix adjust. Identities = 24/86 (28%), Positives = 40/86 (47%), Gaps = 5/86 (6%) Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + +++F+KG+V LI T + G+DI V +I + R+GR GR + + Sbjct 483 ETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYDASASPIRMLQRMGRTGRKRKGYIY 542 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNT 641 + L ++E W R K Y T Sbjct 543 MLLTRGKEEAKW-----ERAKDAYRT 563 >sp|Q68EV5|CMS1_XENLA Protein CMSS1 OS=Xenopus laevis OX=8355 GN=cmss1 PE=2 SV=1 Length=277 Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust. Identities = 24/73 (33%), Positives = 41/73 (56%), Gaps = 2/73 (3%) Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD-IVVGTPGRLDDLVSTG 357 A +TL IK + + K+ +L + +DQ+++LE V I +GTPGR+ L+ Sbjct 163 AHRTLELIKLINAFKADTKVMKLFA-KHIKIKDQINLLEKNVTHIGIGTPGRIKALIDQD 221 Query 358 KLNLSQVRFLVLD 370 L+L +++LV D Sbjct 222 GLSLESMKYLVFD 234 >sp|A4RHU9|DCL2_PYRO7 Dicer-like protein 2 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DCL2 PE=3 SV=3 Length=1485 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/139 (24%), Positives = 59/139 (42%), Gaps = 23/139 (17%) Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQA-IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 +PEM S +++L +R ++ ++ I+F + + L Q PD + Sbjct 408 APEMTSIKLQVL-----LRILRGYEGSPVGIVFVKERATAGILSQLL---AIIPDINA-R 458 Query 540 FSCVCLHGDRKPHERKQN-------------LERFKKGDVRFLICTDVAARGIDIHGVPY 586 + C+ G + RK N LE+F+ G + L+ T V GID+ Sbjct 459 YKVGCMVGTSRYMSRKMNIHEVLQQGDDLLALEKFRSGAINLLVATSVLEEGIDVPVCNL 518 Query 587 VINVTLPDEKQNYVHRIGR 605 VI +P ++++ R GR Sbjct 519 VICFDMPANLKSFIQRRGR 537 >sp|A7TSV4|MPH1_VANPO ATP-dependent DNA helicase MPH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=MPH1 PE=3 SV=1 Length=1012 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 29/56 (52%), Gaps = 0/56 (0%) Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ++K+ + +FK GD L+CT + G+DI V +I + R+GR GR Sbjct 555 QQKEVISKFKNGDYNVLVCTSIGEEGLDIGEVDMIICFDTTGSPIKNIQRMGRTGR 610 >sp|Q96UB6|SSH4_NEUCR Protein ssh4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=ssh4 PE=3 SV=2 Length=503 Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 58/130 (45%), Gaps = 21/130 (16%) Query 133 HYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFD--NYGEE 185 +Y+E +D+ L +G +T L G K+ + G + +N+ F+ +YG + Sbjct 158 YYWEAKIYDKPENTLISIGMATKPYPLFRLPGFHKYSVAYLSNGTRRYNQPFNATSYGPQ 217 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPA------CVLKNAELK 239 D IG G + F++NGK L ++ +K+Q FP+ C+ + Sbjct 218 VVQGDVIGVGYRPRSGTIFFTRNGKKLE---DVVHGLKSQNFFPSIGANGPCI-----VH 269 Query 240 FNFGEEEFKF 249 NFG+ F F Sbjct 270 VNFGQAGFVF 279 >sp|Q8BGE5|FANCM_MOUSE Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3 Length=2021 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 25/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 E+ Q + +F+ G L+ T V G+DI V +I + R+GR GR +R Sbjct 509 EQLQVVRQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQRMGRTGR-KRQ 567 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCY 639 G + ++A +E+ Y+ S K Y Sbjct 568 GRIVVILAEGREERTYNQSQSNKKNIY 594 >sp|Q3MHZ2|SPSB3_BOVIN SPRY domain-containing SOCS box protein 3 OS=Bos taurus OX=9913 GN=SPSB3 PE=2 SV=1 Length=345 Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust. Identities = 33/119 (28%), Positives = 50/119 (42%), Gaps = 15/119 (13%) Query 123 RATKGLMKGKHYYEVSCHDQGL---CRVGWSTMQASLD---------LGTDKFGFGFGGT 170 R TK L +G+H++E+ VG T LD LG D+ +G T Sbjct 138 RGTKELGEGQHFWEIKMTSPVYGTDMMVGIGTSDVDLDKYHHTFCSLLGRDEDSWGLSYT 197 Query 171 GKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229 G H ++ F IG +LD G + F KN K +G+A ++N+ +P Sbjct 198 GLLHHKGDKTSFSSRFGQGSIIGVHLDTWHGTLTFFKNRKCIGVAAT---QLQNKRFYP 253 >sp|O93530|WRN_XENLA Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Xenopus laevis OX=8355 GN=wrn PE=1 SV=1 Length=1436 Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%) Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 I++C T+ + + I+ G +C H +R++ RF + ++ Sbjct 710 TIVYCPTRKTSEQVTAELIKLG---------IACGTYHAGMGIKQRREVHHRFMRDEIHC 760 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ++ T GI+ + VI+ P E ++Y IGR GR Sbjct 761 VVATVAFGMGINKPDIRKVIHYGAPKEMESYYQEIGRAGR 800 >sp|Q5FVR6|CMS1_RAT Protein CMSS1 OS=Rattus norvegicus OX=10116 GN=Cmss1 PE=1 SV=1 Length=276 Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust. Identities = 23/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (3%) Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTG 357 A + L I+ + + K+ +L + ++Q+ +LE + + VGTPGR+ +LV Sbjct 162 AVRALELIRSLTAFKGDAKVMKLFA-KHIKVQEQVKLLEKRAIHLGVGTPGRIKELVKQD 220 Query 358 KLNLSQVRFLVLD 370 LNL+ ++FLV D Sbjct 221 GLNLNPLKFLVFD 233 >sp|Q7XD96|DCL3B_ORYSJ Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica OX=39947 GN=DCL3B PE=3 SV=2 Length=1637 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 27/58 (47%), Gaps = 0/58 (0%) Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 P ++ L+ F+ G V L TDV G+D+ VI LP +YV GR R Sbjct 456 PAVQRFTLDLFRAGKVNLLFTTDVTEEGVDVPNCSCVIRFDLPRTVCSYVQSRGRARR 513 >sp|F1LMY4|RYR1_RAT Ryanodine receptor 1 OS=Rattus norvegicus OX=10116 GN=Ryr1 PE=1 SV=1 Length=5035 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 23/94 (24%), Positives = 45/94 (48%), Gaps = 5/94 (5%) Query 123 RATK--GLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQ 178 RA K + G+ Y+E G +GW+ ++ ++LG D + F G + + Sbjct 1077 RAEKSYAVQSGRWYFEFEAVTTGR-ELGWARPELRPDVELGADDLAYVFNGHRGQRWHLG 1135 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDL 212 + +G + D +GC +D+ + + F+ NG+ L Sbjct 1136 SEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVL 1169 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 23/40 (58%), Gaps = 3/40 (8%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPA 230 IGC +D+ G + F+ NGK+ F++ P N LFPA Sbjct 1515 VIGCLVDLATGLMTFTANGKESNTFFQVEP---NTKLFPA 1551 >sp|A0A1D5PRR9|FANCM_CHICK Fanconi anemia group M protein OS=Gallus gallus OX=9031 GN=FANCM PE=1 SV=1 Length=2041 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 24/81 (30%), Positives = 41/81 (51%), Gaps = 1/81 (1%) Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 E+ + ++RF++G L+ T V G+DI V +I V R+GR GR +R Sbjct 523 EQLEVVKRFREGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMGRTGR-QRQ 581 Query 613 GLAISLVATEKEKVWYHVCSS 633 G + ++A +E+ Y+ S Sbjct 582 GRVVVILAEGREERTYNQSQS 602 >sp|B4KNC5|FBSP1_DROMO F-box/SPRY domain-containing protein 1 OS=Drosophila mojavensis OX=7230 GN=Fsn PE=3 SV=1 Length=252 Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust. Identities = 49/184 (27%), Positives = 74/184 (40%), Gaps = 25/184 (14%) Query 79 TTIKTGA-SVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE-WHGCRATKGLMKGKHYYE 136 TT KT + L+ W NP D I +G V + RA G +G+H +E Sbjct 67 TTYKTKLRAYLHAW--NPNDCSRNVYIKPNGFTLHRNPVAQSTDAARAKIGFRQGRHAWE 124 Query 137 VSCHDQ--GLCRVGWSTMQASLD-------LGTDKFGFGFG-------GTGKKSHNKQFD 180 V + +G ST +A+L LG+D +G+ G N Sbjct 125 VIWEGPLGTVAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGNYPLL 184 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAEL 238 N ++ + + I LD D + F KN + LG+AF P K L+P + V N E+ Sbjct 185 NNAPKYQVGERIRVILDCDDNTLSFEKNYEFLGVAFRGLPAKK---LYPTVSAVYGNTEV 241 Query 239 KFNF 242 + Sbjct 242 SMVY 245 >sp|P53076|VID30_YEAST Vacuolar import and degradation protein 30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VID30 PE=1 SV=1 Length=958 Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 43/90 (48%), Gaps = 7/90 (8%) Query 163 FGF-GFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPH 221 FG+ GF G S +Q Y + F D IGC ++ G + F+KNG LG AF Sbjct 510 FGYCGFDGLITNS-TEQSKEYAKPFGRDDVIGCGINFIDGSIFFTKNGIHLGNAF---TD 565 Query 222 MKNQALFPACVLK-NAELKFNFG-EEEFKF 249 + + P L+ +K NFG E+F F Sbjct 566 LNDLEFVPYVALRPGNSIKTNFGLNEDFVF 595 >sp|P50729|RECS_BACSU Probable ATP-dependent DNA helicase RecS OS=Bacillus subtilis (strain 168) OX=224308 GN=recS PE=3 SV=1 Length=496 Score = 38.5 bits (88), Expect = 0.23, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 0/75 (0%) Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG + +R ++F + + CT+ G+D + YVI+ LP + ++ IGR Sbjct 260 HGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRYVIHFHLPQTAEAFMQEIGR 319 Query 606 VGRAERMGLAISLVA 620 GR + ++I L A Sbjct 320 AGRDGKPSVSILLRA 334 >sp|A6ZVS0|MPH1_YEAS7 ATP-dependent DNA helicase MPH1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=MPH1 PE=3 SV=1 Length=993 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 21/68 (31%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 +K+ + FKKG+ L+CT + G+DI V +I + R+GR GR +R G Sbjct 556 QKEVIHNFKKGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRMGRTGR-KRDG 614 Query 614 LAISLVAT 621 + L ++ Sbjct 615 KIVLLFSS 622 >sp|Q57742|HELX_METJA Uncharacterized ATP-dependent helicase MJ0294 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0294 PE=3 SV=1 Length=841 Score = 38.5 bits (88), Expect = 0.23, Method: Compositional matrix adjust. Identities = 30/109 (28%), Positives = 50/109 (46%), Gaps = 10/109 (9%) Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + I+EHK +IF T+ + + ++++Q G + H S H R + Sbjct 273 KLIEEHK--TTLIFTNTRSATERV-AFYLKQLGVEKVETHHSSLSREH-------RLEVE 322 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 E+ KKG++R I + G+DI + VI + P + RIGR G Sbjct 323 EKLKKGEIRVCISSTSLELGVDIGSIDLVILLGSPKSVSRALQRIGRSG 371 >sp|P40562|MPH1_YEAST ATP-dependent DNA helicase MPH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MPH1 PE=1 SV=1 Length=993 Score = 38.5 bits (88), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/68 (31%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 +K+ + FKKG+ L+CT + G+DI V +I + R+GR GR +R G Sbjct 556 QKEVIHNFKKGEYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRMGRTGR-KRDG 614 Query 614 LAISLVAT 621 + L ++ Sbjct 615 KIVLLFSS 622 >sp|Q6PJ21|SPSB3_HUMAN SPRY domain-containing SOCS box protein 3 OS=Homo sapiens OX=9606 GN=SPSB3 PE=1 SV=2 Length=355 Score = 38.1 bits (87), Expect = 0.27, Method: Compositional matrix adjust. Identities = 33/119 (28%), Positives = 50/119 (42%), Gaps = 15/119 (13%) Query 123 RATKGLMKGKHYYEVSCHDQGL---CRVGWSTMQASLD---------LGTDKFGFGFGGT 170 R TK L +G+H++E+ VG T LD LG D+ +G T Sbjct 139 RGTKELGEGQHFWEIKMTSPVYGTDMMVGIGTSDVDLDKYRHTFCSLLGRDEDSWGLSYT 198 Query 171 GKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229 G H ++ F IG +LD G + F KN K +G+A ++N+ +P Sbjct 199 GLLHHKGDKTSFSSRFGQGSIIGVHLDTWHGTLTFFKNRKCIGVAAT---KLQNKRFYP 254 >sp|Q0CEI2|DCL2_ASPTN Dicer-like protein 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dcl2 PE=3 SV=2 Length=1377 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 0/57 (0%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 ++ L F+ G ++ TDV GIDI VI P +++V R GR R E Sbjct 439 QRDTLSEFRSGQKNLIVATDVLEEGIDISACSVVICYDKPANVKSFVQRRGRARRKE 495 >sp|Q571F5|SPSB3_MOUSE SPRY domain-containing SOCS box protein 3 OS=Mus musculus OX=10090 GN=Spsb3 PE=2 SV=2 Length=354 Score = 38.1 bits (87), Expect = 0.29, Method: Compositional matrix adjust. Identities = 33/119 (28%), Positives = 49/119 (41%), Gaps = 15/119 (13%) Query 123 RATKGLMKGKHYYEVSCHDQGL---CRVGWSTMQASLD---------LGTDKFGFGFGGT 170 R TK L G+H++E+ VG T LD LG D+ +G T Sbjct 139 RGTKELGDGQHFWEIKMTSPVYGTDMMVGIGTSDVDLDKYHHTFCSLLGRDEDSWGLSYT 198 Query 171 GKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229 G H ++ F IG +LD G + F KN K +G+A ++N+ +P Sbjct 199 GLLHHKGDKTSFSSRFGQGSIIGVHLDTWHGTLTFFKNRKCIGVA---ATRLQNRRFYP 254 >sp|Q0UL22|DCL2_PHANO Dicer-like protein 2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DCL2 PE=3 SV=2 Length=1399 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 17/61 (28%), Positives = 30/61 (49%), Gaps = 0/61 (0%) Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 +P ++ LE F+ G + ++ T V GID+ V+ P +++V R GR + Sbjct 434 EPRNQQATLENFRAGKLNLILATSVLEEGIDVSSCHLVVCFESPKNLKSFVQRRGRARKE 493 Query 610 E 610 E Sbjct 494 E 494 >sp|Q0U6G5|AMPP3_PHANO Probable Xaa-Pro aminopeptidase PEPP OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=PEPP PE=3 SV=1 Length=463 Score = 38.1 bits (87), Expect = 0.30, Method: Compositional matrix adjust. Identities = 27/80 (34%), Positives = 42/80 (53%), Gaps = 6/80 (8%) Query 283 LPNAPKALIVEPS----RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 LP A + VEP R + E L + +Q K+YID L + +GGV D + V E+ Sbjct 384 LP-ARSVITVEPGIYFCRFIIEPYLKDDQQ-KQYIDEKVLEKYWSVGGVRIEDNILVTED 441 Query 339 GVDIVVGTPGRLDDLVSTGK 358 G++ + TP +D++ S K Sbjct 442 GIENLTPTPKEIDEITSLVK 461 >sp|A2QX45|DCL22_ASPNC Dicer-like protein 2-2 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dcl2-2 PE=3 SV=2 Length=1362 Score = 38.1 bits (87), Expect = 0.34, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 29/55 (53%), Gaps = 0/55 (0%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + + LE+F++G + +I TD GID+ V+N ++++ R GR R Sbjct 411 QTETLEKFRQGSLNLIITTDALEEGIDVPACNTVLNFNCQLSLKSFIQRRGRARR 465 >sp|Q2T9Y1|CC026_BOVIN Uncharacterized protein C3orf26 homolog OS=Bos taurus OX=9913 PE=2 SV=1 Length=279 Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust. Identities = 17/45 (38%), Positives = 31/45 (69%), Gaps = 1/45 (2%) Query 327 VAARDQLSVLENGV-DIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 + ++Q+ +LE V + VGTPGR+ +L+ G L+L+ ++FL+ D Sbjct 192 IKVQEQVKLLEKRVVHLGVGTPGRIKELIKQGGLHLNPLKFLIFD 236 >sp|Q581T1|REH2_TRYB2 RNA editing associated helicase 2 OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=REH2 PE=1 SV=1 Length=2167 Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 44/87 (51%), Gaps = 4/87 (5%) Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 ++ +F +CLH E+ + +G ++ ++ T++A G+ I V VI+V Sbjct 1618 ERNAKFHIICLHSSVGAEEQMRCFLPAPEGKIKLILSTNIAESGVTIDDVAAVIDVGRGK 1677 Query 595 EKQNYVHRIG--RVGRAERMGLAISLV 619 EK +YV R G VGR E MG LV Sbjct 1678 EK-SYVMRKGTTSVGRNE-MGSMSQLV 1702 >sp|P30015|LHR_ECOLI Probable ATP-dependent helicase Lhr OS=Escherichia coli (strain K12) OX=83333 GN=lhr PE=3 SV=2 Length=1538 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 29/62 (47%), Gaps = 0/62 (0%) Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG +R + K G++R ++ T GID+ V VI V P + + RIGR Sbjct 356 HGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGR 415 Query 606 VG 607 G Sbjct 416 AG 417 >sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2 Length=4861 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 26/87 (30%), Positives = 40/87 (46%), Gaps = 7/87 (8%) Query 170 TGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229 +G HN + FT D I C LD++ + F KNG++ LAFE + L+P Sbjct 2115 SGNLYHNGEQTLTLSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFE---DVDAAELYP 2171 Query 230 ACVL---KNAELKFNFGEEEFKFPPKD 253 CV+ N K + + + P+D Sbjct 2172 -CVMFYSSNPGEKVKICDMQMRGTPRD 2197 >sp|P43809|RECG_HAEIN ATP-dependent DNA helicase RecG OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=recG PE=3 SV=1 Length=693 Score = 37.4 bits (85), Expect = 0.53, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 34/66 (52%), Gaps = 1/66 (2%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +HG KP E++ + RFK ++ L+ T V G+D+ +I + +H++ Sbjct 522 LVHGRMKPQEKQDVMMRFKNAELDLLVATTVIEVGVDVPNASLMIIENAERLGLSQLHQL 581 Query 604 -GRVGR 608 GRVGR Sbjct 582 RGRVGR 587 >sp|Q9FT74|RQL1_ARATH ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana OX=3702 GN=RECQL1 PE=2 SV=1 Length=606 Score = 37.4 bits (85), Expect = 0.54, Method: Compositional matrix adjust. Identities = 36/146 (25%), Positives = 64/146 (44%), Gaps = 12/146 (8%) Query 501 IKEHKMDQA-IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 +++ DQ+ I++C +K +C ++ ++ ++ + V H +R Sbjct 421 LRDRFKDQSGIVYCLSKSECVDVAKFLNEKC--------KVKTVYYHAGVPAKQRVDVQR 472 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +++ G+VR + T GID V +VI+ TL ++Y GR GR I L Sbjct 473 KWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLY 532 Query 620 ATEKEKVWYHVCSSR-GKGCYNTRLK 644 +K+ VC R G+G R K Sbjct 533 --QKKDFSRVVCMLRNGQGRNMDRFK 556 >sp|Q6TV19|DICER_DANRE Endoribonuclease Dicer OS=Danio rerio OX=7955 GN=dicer1 PE=2 SV=2 Length=1865 Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust. Identities = 25/76 (33%), Positives = 37/76 (49%), Gaps = 4/76 (5%) Query 554 RKQN--LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 RKQ L +F+ + LI T + G+DI V+ LP E ++YV GR RA Sbjct 485 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGR-ARAP- 542 Query 612 MGLAISLVATEKEKVW 627 + I L +E+ K + Sbjct 543 VSNYIMLADSERTKTF 558 >sp|Q8R418|DICER_MOUSE Endoribonuclease Dicer OS=Mus musculus OX=10090 GN=Dicer1 PE=1 SV=3 Length=1916 Score = 37.4 bits (85), Expect = 0.59, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (4%) Query 554 RKQN--LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 RKQ L +F+ + LI T V G+DI V+ LP E ++YV GR Sbjct 499 RKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 553 >sp|Q914K8|Y022_SIFVH Putative helicase 22 OS=Sulfolobus islandicus filamentous virus (isolate Iceland/Hveragerdi) OX=654908 GN=SIFV0022 PE=4 SV=1 Length=559 Score = 37.4 bits (85), Expect = 0.59, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 32/62 (52%), Gaps = 0/62 (0%) Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 K ER + +E K ++ LI T +A G+DI + V+ +T + + RIGRV R Sbjct 458 KLEERMEKIEALKNEKLQVLISTSLADEGLDIPNLRLVVLLTQGKSRIKLIQRIGRVMRV 517 Query 610 ER 611 + Sbjct 518 SQ 519 >sp|P34529|DCR1_CAEEL Endoribonuclease dcr-1 OS=Caenorhabditis elegans OX=6239 GN=dcr-1 PE=1 SV=3 Length=1910 Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust. Identities = 20/59 (34%), Positives = 31/59 (53%), Gaps = 1/59 (2%) Query 552 HERK-QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 H+R+ + L RF + ++ LI T V G+D+ VI P + ++YV GR RA Sbjct 439 HKRQTEVLRRFHRNEINCLIATSVLEEGVDVKQCNLVIKFDRPLDMRSYVQSKGRARRA 497 >sp|A0MQH0|DICER_CRIGR Endoribonuclease Dicer OS=Cricetulus griseus OX=10029 GN=DICER1 PE=2 SV=3 Length=1917 Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (4%) Query 554 RKQN--LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 RKQ L +F+ + LI T V G+DI V+ LP E ++YV GR Sbjct 499 RKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 553 >sp|Q14191|WRN_HUMAN Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2 Length=1432 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 9/100 (9%) Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 II+C ++ QQ G +K + SC H RK RF + +++ Sbjct 767 TIIYCPSR--------KMTQQVTGELRKLN-LSCGTYHAGMSFSTRKDIHHRFVRDEIQC 817 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +I T GI+ + VI+ P + ++Y IGR GR Sbjct 818 VIATIAFGMGINKADIRQVIHYGAPKDMESYYQEIGRAGR 857 >sp|A1CS00|MPH1_ASPCL ATP-dependent DNA helicase mph1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=mph1 PE=3 SV=1 Length=1119 Score = 37.0 bits (84), Expect = 0.73, Method: Compositional matrix adjust. Identities = 21/71 (30%), Positives = 36/71 (51%), Gaps = 1/71 (1%) Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 +++FKKGD ++ T + G+DI V ++ + R+GR GR +R G + Sbjct 730 VQKFKKGDYNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGR-KRAGNIVL 788 Query 618 LVATEKEKVWY 628 L+ KE+ Y Sbjct 789 LLMQGKEEESY 799 >sp|P71359|RECQ_HAEIN ATP-dependent DNA helicase RecQ OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=recQ PE=3 SV=1 Length=619 Score = 37.0 bits (84), Expect = 0.76, Method: Compositional matrix adjust. Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 9/114 (8%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E R + K II+C ++ + + + +G S H + R Sbjct 228 EQLTRFVLAQKGKSGIIYCNSRNKVERIAESLRNKG---------VSAAAYHAGMETAIR 278 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ++ + F++ +V+ ++ T GI+ V +V + LP ++Y GR GR Sbjct 279 ERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGR 332 >sp|Q39YM4|MURE_GEOMG UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase OS=Geobacter metallireducens (strain ATCC 53774 / DSM 7210 / GS-15) OX=269799 GN=murE PE=3 SV=1 Length=511 Score = 37.0 bits (84), Expect = 0.76, Method: Compositional matrix adjust. Identities = 18/55 (33%), Positives = 29/55 (53%), Gaps = 0/55 (0%) Query 93 MNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 +NP + G + A+ +GL C SR+V+ A +G+ H Y V+ D+G V Sbjct 10 INPSEAGGSLALEIEGLYCDSRQVRSGGLFFALRGVATDGHDYIVASRDRGAVAV 64 >sp|P46063|RECQ1_HUMAN ATP-dependent DNA helicase Q1 OS=Homo sapiens OX=9606 GN=RECQL PE=1 SV=3 Length=649 Score = 37.0 bits (84), Expect = 0.76, Method: Compositional matrix adjust. Identities = 27/134 (20%), Positives = 56/134 (42%), Gaps = 25/134 (19%) Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD----NLEQYFIQQGGGPD 534 +N+ + + +K++ G Y K II+C ++ D + +L+ I G Sbjct 295 SNTEDFIEDIVKLINGRY--------KGQSGIIYCFSQKDSEQVTVSLQNLGIHAGA--- 343 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 H + +P ++ ++ +++ ++ T GID V +VI+ ++ Sbjct 344 ----------YHANLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSK 393 Query 595 EKQNYVHRIGRVGR 608 +NY GR GR Sbjct 394 SMENYYQESGRAGR 407 >sp|Q25BN1|DICER_CHICK Endoribonuclease Dicer OS=Gallus gallus OX=9031 GN=DICER1 PE=2 SV=3 Length=1921 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 37/76 (49%), Gaps = 4/76 (5%) Query 554 RKQN--LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 RKQ L +F+ + LI T + G+DI V+ LP E ++YV GR RA Sbjct 499 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGR-ARAP- 556 Query 612 MGLAISLVATEKEKVW 627 + I L T+K K + Sbjct 557 ISNYIMLADTDKIKSF 572 >sp|P24230|RECG_ECOLI ATP-dependent DNA helicase RecG OS=Escherichia coli (strain K12) OX=83333 GN=recG PE=1 SV=1 Length=693 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 36/71 (51%), Gaps = 1/71 (1%) Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + + +HG KP E++ + FK+G++ L+ T V G+D+ +I Sbjct 517 ELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMIIENPERLGLA 576 Query 599 YVHRI-GRVGR 608 +H++ GRVGR Sbjct 577 QLHQLRGRVGR 587 >sp|Q8XD86|RECG_ECO57 ATP-dependent DNA helicase RecG OS=Escherichia coli O157:H7 OX=83334 GN=recG PE=3 SV=1 Length=693 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 34/66 (52%), Gaps = 1/66 (2%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +HG KP E++ + FK+G++ L+ T V G+D+ +I +H++ Sbjct 522 LVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQL 581 Query 604 -GRVGR 608 GRVGR Sbjct 582 RGRVGR 587 >sp|B7UM74|RECG_ECO27 ATP-dependent DNA helicase RecG OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) OX=574521 GN=recG PE=3 SV=1 Length=693 Score = 36.6 bits (83), Expect = 0.88, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 34/66 (52%), Gaps = 1/66 (2%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +HG KP E++ + FK+G++ L+ T V G+D+ +I +H++ Sbjct 522 LVHGRMKPAEKQAVMTSFKQGELHLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQL 581 Query 604 -GRVGR 608 GRVGR Sbjct 582 RGRVGR 587 >sp|A1D9Z6|DCL2_NEOFI Dicer-like protein 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dcl2 PE=3 SV=1 Length=1388 Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust. Identities = 18/57 (32%), Positives = 28/57 (49%), Gaps = 0/57 (0%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 ++ L+ F+ G +I TDV GIDI V+ P +++V R GR R + Sbjct 440 QRDTLDDFRSGRKNLIIATDVLEEGIDISACSVVVCYDKPPNLKSFVQRRGRARRKQ 496 >sp|B3DLA6|DICER_XENTR Endoribonuclease Dicer OS=Xenopus tropicalis OX=8364 GN=dicer1 PE=2 SV=2 Length=1893 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 2/54 (4%) Query 554 RKQN--LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 RKQ L +F+ + LI T + G+DI V+ LP E ++YV GR Sbjct 490 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPSEYRSYVQSKGR 543 >sp|Q9UPY3|DICER_HUMAN Endoribonuclease Dicer OS=Homo sapiens OX=9606 GN=DICER1 PE=1 SV=3 Length=1922 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 37/76 (49%), Gaps = 4/76 (5%) Query 554 RKQN--LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 RKQ L +F+ + LI T + G+DI V+ LP E ++YV GR RA Sbjct 499 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGR-ARAP- 556 Query 612 MGLAISLVATEKEKVW 627 + I L T+K K + Sbjct 557 ISNYIMLADTDKIKSF 572 >sp|Q6TUI4|DICER_BOVIN Endoribonuclease Dicer OS=Bos taurus OX=9913 GN=DICER1 PE=2 SV=3 Length=1923 Score = 37.0 bits (84), Expect = 0.98, Method: Compositional matrix adjust. Identities = 19/55 (35%), Positives = 27/55 (49%), Gaps = 2/55 (4%) Query 554 RKQN--LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 RKQ L +F+ + LI T + G+DI V+ LP E ++YV GR Sbjct 499 RKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRA 553 >sp|A4RN08|MPH1_PYRO7 ATP-dependent DNA helicase MPH1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=MPH1 PE=3 SV=1 Length=1102 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 37/139 (27%), Positives = 54/139 (39%), Gaps = 30/139 (22%) Query 519 CDNLEQYFIQQGGGPDKKGHQFS-----------CVCLH------------GDRKPHE-- 553 CDNL YF+ G G + FS + +H D K E Sbjct 488 CDNLLNYFMDAGEGSSTRVIVFSEYRDSAEEITRVLNVHKPMISASLFVGQADSKKSEGM 547 Query 554 -RKQNLE---RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 +KQ +E +F+ G L+ T + G+DI V +I + R+GR GR Sbjct 548 KQKQQIETIAKFRDGIFNVLVATSIGEEGLDIGQVDLIICYDASSSPIRMLQRMGRTGR- 606 Query 610 ERMGLAISLVATEKEKVWY 628 +R G L+ KE+ Y Sbjct 607 KRAGKITLLLMKGKEEDNY 625 >sp|B2WMQ2|AMPP3_PYRTR Probable Xaa-Pro aminopeptidase pepP OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) OX=426418 GN=pepP PE=3 SV=1 Length=463 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/53 (40%), Positives = 29/53 (55%), Gaps = 3/53 (6%) Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS 362 KKYID L + +GGV D + V +NG + + TP +DD+ KL LS Sbjct 413 KKYIDESVLEKYWSVGGVRIEDNVLVTKNGFENLTPTPKEIDDIT---KLILS 462 >sp|Q6FPQ3|MPH1_CANGA ATP-dependent DNA helicase MPH1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=MPH1 PE=3 SV=1 Length=1052 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/73 (26%), Positives = 34/73 (47%), Gaps = 0/73 (0%) Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ++K+ +++FK G L+CT + G+DI V +I + R+GR GR Sbjct 550 QQKEVIKKFKSGLYNVLVCTSIGEEGLDIGEVDLIICYDTTSSPIKNIQRMGRTGRKRDG 609 Query 613 GLAISLVATEKEK 625 + + + E K Sbjct 610 RIVLMFSSNEASK 622 >sp|Q5A1A0|MPH1_CANAL ATP-dependent DNA helicase MPH1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MPH1 PE=3 SV=2 Length=1187 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 +K+ +++FKKG L+ T + G+DI V +I + R+GR GR +R G Sbjct 581 QKEIIKKFKKGVFNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTGR-KRDG 639 Query 614 LAISLVATEKE 624 + L ++ +E Sbjct 640 KVLMLFSSNEE 650 >sp|A2R345|DCL21_ASPNC Dicer-like protein 2-1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dcl2-1 PE=3 SV=2 Length=1387 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 34/71 (48%), Gaps = 2/71 (3%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 ++ L F+ G +I TDV GIDI V+ P +++V R GR R + Sbjct 441 QRDTLSEFRTGQKNLIIATDVLEEGIDISACSVVVCFDKPPNLKSFVQRRGR-ARHRQST 499 Query 614 LAISLVATEKE 624 AI + AT+ E Sbjct 500 YAI-MFATDDE 509 >sp|E3S6N7|AMPP3_PYRTT Probable Xaa-Pro aminopeptidase pepP OS=Pyrenophora teres f. teres (strain 0-1) OX=861557 GN=pepP PE=3 SV=1 Length=463 Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/53 (40%), Positives = 28/53 (53%), Gaps = 3/53 (6%) Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS 362 KKYID L +GGV D + V +NG + + TP +DD+ KL LS Sbjct 413 KKYIDESVLERYWSVGGVRIEDNVLVTKNGFENLTPTPKEIDDIT---KLILS 462 >sp|Q6CQX2|MPH1_KLULA ATP-dependent DNA helicase MPH1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=MPH1 PE=3 SV=2 Length=1002 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 21/73 (29%), Positives = 33/73 (45%), Gaps = 0/73 (0%) Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ++K+ + FKKG L+CT + G+DI V +I + R+GR GR Sbjct 569 QQKKVISDFKKGIYNVLVCTSIGEEGLDIGEVDLIICFDSTSSPIKNIQRMGRTGRKRDG 628 Query 613 GLAISLVATEKEK 625 + + EK K Sbjct 629 RIVLLFSGNEKFK 641 >sp|P18160|SPLA_DICDI Dual specificity protein kinase splA OS=Dictyostelium discoideum OX=44689 GN=splA PE=1 SV=3 Length=2410 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 30/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%) Query 121 GCRATKGLMKGKHYYEVSCH--DQGLCRVGWSTMQAS--LDLGTDKFGFGF-GGTGKKSH 175 G RAT+ +G Y+EV D+G +G + ++ +G +G+ G+K Sbjct 1074 GVRATQPFGEGFCYFEVIIDQLDKGQLSIGLANLEYPTFYHVGWMPRSYGYHNDDGRKFR 1133 Query 176 NKQ------FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFE 217 ++ ++YG + D IGC L + F+KNG LG AF Sbjct 1134 WREEPGVNEGESYGSSYKKGDIIGCGLSFTSREIFFTKNGMYLGTAFS 1181 >sp|Q9CZT6|CMS1_MOUSE Protein CMSS1 OS=Mus musculus OX=10090 GN=Cmss1 PE=2 SV=1 Length=276 Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query 322 LIIGGVAARDQLSVLENGV-DIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 L + ++Q+ +LE V + VGTPGR+ +LV L+L+ ++FLV D Sbjct 184 LFAKHIKVQEQVKLLEKRVIHLGVGTPGRIKELVKQDGLHLNPLKFLVFD 233 >sp|Q5RF63|RECQ1_PONAB ATP-dependent DNA helicase Q1 OS=Pongo abelii OX=9601 GN=RECQL PE=2 SV=1 Length=649 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 27/134 (20%), Positives = 55/134 (41%), Gaps = 25/134 (19%) Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD----NLEQYFIQQGGGPD 534 +N+ + + +K++ G Y K II+C ++ D + +L I G Sbjct 295 SNTEDFIEDIVKLINGRY--------KGQSGIIYCFSQKDSEQVTVSLRNLGIHAGA--- 343 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 H + +P ++ ++ +++ ++ T GID V +VI+ ++ Sbjct 344 ----------YHANLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSK 393 Query 595 EKQNYVHRIGRVGR 608 +NY GR GR Sbjct 394 SMENYYQESGRAGR 407 >sp|I3XHK1|FANCM_ARATH DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FANCM PE=2 SV=1 Length=1344 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 41/172 (24%), Positives = 65/172 (38%), Gaps = 28/172 (16%) Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL------------EQY 525 GA SP++ S+ ++IL + V K+ K + IIF + ++ Sbjct 445 GAPSPKL-SKMLEILVDHFKV---KDPKTSRVIIFSNFRGSVRDIMNALSNIGDMVKATE 500 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 FI Q G KG ++ LE+F+ G ++ T + G+DI V Sbjct 501 FIGQSSGKTLKGQSQKI-----------QQAVLEKFRAGGFNVIVATSIGEEGLDIMEVD 549 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 VI + R+GR GR G + L EK Y + G+ Sbjct 550 LVICFDANVSPLRMIQRMGRTGRKNN-GRVVVLACEGSEKNSYMRKQASGRA 600 >sp|P0CR12|MRH4_CRYNJ ATP-dependent RNA helicase MRH4, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=MRH4 PE=3 SV=1 Length=551 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/164 (27%), Positives = 69/164 (42%), Gaps = 49/164 (30%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYID-NPKLR----ELLIIGGVAARDQLSVLENGVD 341 P+++I+ P+ EL Q+ QF K + N KL + GGV + VD Sbjct 139 PRSIILSPTHELTRQS----TQFAKILTHNTKLSVHGMSSTVSGGVGEK------RGSVD 188 Query 342 IVVGTPGRL-------------------------DDLVSTGKLNLSQVRFLVLDEADGLL 376 +++GT G L D G + +V ++V+DEAD LL Sbjct 189 VLLGTVGSLRRMFGMTRSEEEQEKEDYIRGKRIWQDEQEKGMVEGDKVEWVVIDEADVLL 248 Query 377 SQG-YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 + Y D I+ V S K+ +I+C+ATL F + L+ Sbjct 249 GREFYLDTIS--------VLSQVKQANLILCTATLPPFLINLLT 284 >sp|P0CR13|MRH4_CRYNB ATP-dependent RNA helicase MRH4, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=MRH4 PE=3 SV=1 Length=551 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 44/164 (27%), Positives = 69/164 (42%), Gaps = 49/164 (30%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYID-NPKLR----ELLIIGGVAARDQLSVLENGVD 341 P+++I+ P+ EL Q+ QF K + N KL + GGV + VD Sbjct 139 PRSIILSPTHELTRQS----TQFAKILTHNTKLSVHGMSSTVSGGVGEK------RGSVD 188 Query 342 IVVGTPGRL-------------------------DDLVSTGKLNLSQVRFLVLDEADGLL 376 +++GT G L D G + +V ++V+DEAD LL Sbjct 189 VLLGTVGSLRRMFGMTRSEEEQEKEDYIRGKRIWQDEQEKGMVEGDKVEWVVIDEADVLL 248 Query 377 SQG-YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 + Y D I+ V S K+ +I+C+ATL F + L+ Sbjct 249 GREFYLDTIS--------VLSQVKQANLILCTATLPPFLINLLT 284 >sp|Q09811|HUS2_SCHPO ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rqh1 PE=1 SV=1 Length=1328 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 12/132 (9%) Query 480 NSPEMWSEAIKILKGEYA--VRAIKE-HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 N P ++ E IK K Y R I H + II+C ++ C +Q + Sbjct 714 NRPNLFYE-IKPKKDLYTELYRFISNGHLHESGIIYCLSRTSC--------EQVAAKLRN 764 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 + H + ER++ ++ G + ++ T G+D V +VI+ + P Sbjct 765 DYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGMGVDKGDVRFVIHHSFPKSL 824 Query 597 QNYVHRIGRVGR 608 + Y GR GR Sbjct 825 EGYYQETGRAGR 836 >sp|Q9CMB4|RECG_PASMU ATP-dependent DNA helicase RecG OS=Pasteurella multocida (strain Pm70) OX=272843 GN=recG PE=3 SV=1 Length=693 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/66 (29%), Positives = 35/66 (53%), Gaps = 1/66 (2%) Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +HG KP E++ ++ FK+ ++ L+ T V G+D+ +I + +H++ Sbjct 522 LVHGRMKPAEKQDIMQAFKQAEIDLLVATTVIEVGVDVPNASLMIIENAERLGLSQLHQL 581 Query 604 -GRVGR 608 GRVGR Sbjct 582 RGRVGR 587 >sp|A4RKC3|DCL1_PYRO7 Dicer-like protein 1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DCL1 PE=3 SV=2 Length=1591 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 27/53 (51%), Gaps = 0/53 (0%) Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 +++Q + RF+ G++ L T +A G+DI G VI L Y+ GR Sbjct 509 QQEQTVSRFRDGEINCLFATSIAEEGLDIPGCNVVIRFDLHGTTIQYIQSRGR 561 >sp|A6M229|IOLC_CLOB8 5-dehydro-2-deoxygluconokinase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) OX=290402 GN=iolC PE=3 SV=1 Length=339 Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 17/116 (15%) Query 154 ASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLD---IDKGHVKFSKNGK 210 A++ +G + G G GK S D +GE F ++ Y D ID +K+SKNG+ Sbjct 48 ANIAVGLARLGKKIGFIGKVSK----DQFGE-FVVN-----YFDNEGIDTSQIKYSKNGE 97 Query 211 DLGLAF-EIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV---ALSKAP 262 +LGL F EI ++ L + + EL + +EE+ K + AL+K+P Sbjct 98 NLGLTFTEIASPTESSILMYRQGIADLELNVDEIDEEYIKNTKAIVISGTALAKSP 153 >sp|Q54900|RECG_STRPN ATP-dependent DNA helicase RecG OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=recG PE=3 SV=2 Length=671 Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/83 (29%), Positives = 41/83 (49%), Gaps = 2/83 (2%) Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 LHG K E+ Q ++ FK+ L+ T V G+++ +I + + +H Sbjct 498 VALLHGRMKSDEKDQIMQDFKERKTDILVSTTVIEVGVNVPNATVMIIMDADRFGLSQLH 557 Query 602 RI-GRVGRAERMGLAISLVATEK 623 ++ GRVGR ++ A+ LVA K Sbjct 558 QLRGRVGRGDKQSYAV-LVANPK 579 >sp|Q16XV7|FBSP1_AEDAE F-box/SPRY domain-containing protein 1 OS=Aedes aegypti OX=7159 GN=Fsn PE=3 SV=1 Length=258 Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 27/180 (15%) Query 94 NPYDRGSAFAIGSDGLCCQSREVKE-WHGCRATKGLMKGKHYYEVSCHDQ--GLCRVGWS 150 NPYD I +G V + G R G G+H +EV + VG + Sbjct 87 NPYDCSRHVYIKPNGFTLHRNPVAQSTDGSRGKIGFQHGRHAWEVRWEGPLGTVAVVGIA 146 Query 151 TMQASLD-------LGTDKFGFGFG-------GTGKKSHNKQFDNYGEEFTMHDTIGCYL 196 T A++ LG D +G+ G N ++ + + I L Sbjct 147 TKDAAIQCHGYYALLGADDQSWGWNLVDNLLLHNGDAHGIYPLLNNAPKYKVGERIRVIL 206 Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNFGEEEFKFPPKDG 254 D D + F KN + LG+AF P ++ +P A V N E+ + PP DG Sbjct 207 DCDDNTLSFEKNYEFLGVAFTDLP---DKVFYPTVAAVYGNTEISM-----VYLGPPLDG 258 >sp|B0X9V1|FBSP1_CULQU F-box/SPRY domain-containing protein 1 OS=Culex quinquefasciatus OX=7176 GN=Fsn PE=3 SV=1 Length=258 Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust. Identities = 45/180 (25%), Positives = 67/180 (37%), Gaps = 27/180 (15%) Query 94 NPYDRGSAFAIGSDGLCCQSREVKE-WHGCRATKGLMKGKHYYEVSCHDQ--GLCRVGWS 150 NPYD I +G V + G R G G+H +EV + VG + Sbjct 87 NPYDCSRHVYIKPNGFTLHRNPVAQSTDGSRGKIGFQHGRHAWEVRWEGPLGTVAVVGIA 146 Query 151 TMQASLD-------LGTDKFGFGFG-------GTGKKSHNKQFDNYGEEFTMHDTIGCYL 196 T A++ LG D +G+ G N ++ + + I L Sbjct 147 TKDAAIQCHGYYALLGADDQSWGWNLVDNLLLHNGDAHGIYPLLNNAPKYKVGERIRVIL 206 Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNFGEEEFKFPPKDG 254 D D + F KN + LG+AF P ++ +P A V N E+ + PP DG Sbjct 207 DCDDNTLSFEKNYEFLGVAFTDLP---DKVFYPTVAAVYGNTEISM-----VYLGPPLDG 258 >sp|P0C5H7|DCL2_EMENI Dicer-like protein 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dcl2 PE=3 SV=1 Length=1429 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/52 (31%), Positives = 26/52 (50%), Gaps = 0/52 (0%) Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 L+ F+ G ++ TDV GID+ VI +P ++++ R GR R Sbjct 407 TLDDFRYGRKNLIVATDVLKEGIDVSACSVVICYNIPKGFESFIQRRGRARR 458 Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust. Identities = 45/208 (22%), Positives = 89/208 (43%), Gaps = 22/208 (11%) Query 334 SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR-MHNQIP 392 +VLE G+ ++V TP L D ++ G + +S++ L+ DEA + + ++ I R ++ Sbjct 106 AVLE-GLQVIVSTPAVLHDAMTHGFVRISRLGLLIFDEAHHCIRKHPTNMIMRNFYHPAL 164 Query 393 QVTSDGKRLQVIVCSAT-------LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 Q G +++ +A+ L + ++ S +L +P+ + Sbjct 165 QEYGPGAVPRILGLTASAGSSREGLQTIEMNLNSVCTTPQAHRQELLEYTHMPELRRVLY 224 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK------GEYAVR 499 P+ + LWE G + + +DNT +A+ I + EY +R Sbjct 225 TPLMKENASLWE--GST---LQKLLERDNTYCSGQMKTFVCKAVHIFQELGIWAAEYFIR 279 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 A E + A + +KID D E+ ++ Sbjct 280 ASVEELLSHA--YVHSKIDLDYDEREYL 305 >sp|Q8IYD8|FANCM_HUMAN Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2 Length=2048 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 1/87 (1%) Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 E+ + +++F+ G L+ T V G+DI V +I V R+GR GR +R Sbjct 524 EQLEVVKQFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGR-KRQ 582 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCY 639 G + +++ +E+ Y+ S + Y Sbjct 583 GRIVIILSEGREERIYNQSQSNKRSIY 609 >sp|Q6BRF0|MPH1_DEBHA ATP-dependent DNA helicase MPH1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=MPH1 PE=3 SV=2 Length=1105 Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust. Identities = 20/67 (30%), Positives = 34/67 (51%), Gaps = 1/67 (1%) Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 +++FKKG+ L+ T + G+DI V ++ + R+GR GR +R G + Sbjct 545 IKKFKKGEYNILVATSIGEEGLDIGEVDLIVCYDSTSSPIKNIQRMGRTGR-KRDGKVLL 603 Query 618 LVATEKE 624 L A +E Sbjct 604 LFAGNEE 610 >sp|P25055|PGKA_CRIFA Phosphoglycerate kinase, glycosomal OS=Crithidia fasciculata OX=5656 GN=PGKA PE=3 SV=1 Length=505 Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust. Identities = 27/76 (36%), Positives = 34/76 (45%), Gaps = 18/76 (24%) Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 I F K ++NP L IIGG D++ VLEN +D V D L G L + +R Sbjct 282 ISYFSKVLNNPPRPLLAIIGGAKLSDKMQVLENLLDCV-------DSLFIGGGLAYTFLR 334 Query 366 FLVLDEADGLLSQGYS 381 SQGYS Sbjct 335 -----------SQGYS 339 >sp|F4HYD7|RANBM_ARATH Ran-binding protein M homolog OS=Arabidopsis thaliana OX=3702 GN=RANBPM PE=1 SV=1 Length=467 Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust. Identities = 26/88 (30%), Positives = 45/88 (51%), Gaps = 12/88 (14%) Query 164 GFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMK 223 G+ + G GK + +G +FT D +G ++ F+KNG +G +IP ++ Sbjct 144 GYLYRGQGKG------EPFGPKFTKDDAVGGGINYASQEFFFTKNGTIVG---KIPKDIR 194 Query 224 NQALFPACVL--KNAELKFNFGEEEFKF 249 LFP + +N E+ NFG+++F F Sbjct 195 GH-LFPTVAVHSQNEEVLVNFGKKKFAF 221 >sp|Q7SCC1|DCL2_NEUCR Dicer-like protein 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dcl-2 PE=2 SV=4 Length=1534 Score = 35.4 bits (80), Expect = 2.2, Method: Compositional matrix adjust. Identities = 22/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 H D E +LE F+ G L+ T V GID+ VI P ++++ R GR Sbjct 466 HMDMTKKEDMTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIKSFIQRRGR 525 Query 606 VGR-AERMGLAISLVATEKEKVWYHV 630 + + L + ++E W+++ Sbjct 526 AREVSSTLYLMVQNASSESATDWHNL 551 >sp|Q9Z129|RECQ1_MOUSE ATP-dependent DNA helicase Q1 OS=Mus musculus OX=10090 GN=Recql PE=1 SV=2 Length=648 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 26/139 (19%) Query 475 TRPGANSPEMWSEAI-KILKGEYAVRAIKEHKMDQAIIFCRTKIDCD----NLEQYFIQQ 529 R +S E ++E I K++ G Y K II+C ++ D + +L++ I Sbjct 290 VRQKPSSAEDFTEDIVKLINGRY--------KGQSGIIYCFSQKDSEQITISLQKLGIHA 341 Query 530 GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN 589 G H + +P ++ + ++ +++ ++ T GID V +VI+ Sbjct 342 GT-------------YHANMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIH 388 Query 590 VTLPDEKQNYVHRIGRVGR 608 ++ +NY GR GR Sbjct 389 HSMSKSMENYYQESGRAGR 407 >sp|Q6AYJ1|RECQ1_RAT ATP-dependent DNA helicase Q1 OS=Rattus norvegicus OX=10116 GN=Recql PE=1 SV=1 Length=621 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/63 (25%), Positives = 32/63 (51%), Gaps = 0/63 (0%) Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 H + +P +R + ++ +++ ++ T GID V +VI+ ++ +NY GR Sbjct 345 HANMEPEDRTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGR 404 Query 606 VGR 608 GR Sbjct 405 AGR 407 >sp|Q2HG76|MPH1_CHAGB ATP-dependent DNA helicase MPH1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=MPH1 PE=3 SV=1 Length=1134 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 34/70 (49%), Gaps = 1/70 (1%) Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + +E+FK G L+ T + G+DI V ++ + R+GR GR +R G Sbjct 600 ETIEKFKNGGFNVLVATSIGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGR-KRAGNI 658 Query 616 ISLVATEKEK 625 + L+ KE+ Sbjct 659 VLLLMKGKEE 668 >sp|A1C9M6|DCL2_ASPCL Dicer-like protein 2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dcl2 PE=3 SV=1 Length=1389 Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust. Identities = 22/69 (32%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 H + L+ F+ G +I TDV GIDI V+ P +++V R GR R ++ Sbjct 438 HGQLSTLDDFRSGHKNLIIATDVLEEGIDISACSVVVCYDKPPNLKSFVQRRGR-ARQKQ 496 Query 612 MGLAISLVA 620 AI A Sbjct 497 STYAIMFPA 505 >sp|Q4WA22|DCL2_ASPFU Dicer-like protein 2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dcl2 PE=3 SV=2 Length=1388 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 0/57 (0%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 ++ L+ F+ G +I TDV GID+ V+ P ++++ R GR R + Sbjct 440 QRDTLDDFRSGRKNLIIATDVLEEGIDLSACSVVVCYDKPPNLKSFIQRRGRARRKQ 496 >sp|O53873|XPB_MYCTU DNA helicase XPB OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=XPB PE=1 SV=2 Length=549 Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust. Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%) Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT-L 592 D+ G + + G + ER+ + F++G+V L+ + VA ID+ + V+ Sbjct 423 DELGAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGT 482 Query 593 PDEKQNYVHRIGRVGR 608 +Q R+GR+ R Sbjct 483 FGSRQEEAQRLGRILR 498 >sp|Q8CSV3|RECG_STAES ATP-dependent DNA helicase RecG OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=recG PE=3 SV=1 Length=682 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/98 (24%), Positives = 48/98 (49%), Gaps = 8/98 (8%) Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +Q G +K G LHG ++ Q +++F K ++ L+ T V G+++ + Sbjct 498 LQSDYGNEKVG------LLHGKMSAEDKDQVMQKFSKHEIDILVSTTVVEVGVNVPNATF 551 Query 587 VINVTLPDEKQNYVHRI-GRVGRAERMGLAISLVATEK 623 ++ + +H++ GRVGR+E + L+A+ K Sbjct 552 MMIYDADRFGLSTLHQLRGRVGRSEHQSYCV-LIASPK 588 >sp|Q9FT73|RECQ2_ARATH ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana OX=3702 GN=RECQL2 PE=1 SV=1 Length=705 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/102 (22%), Positives = 45/102 (44%), Gaps = 9/102 (9%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I++C ++ +C+ + ++G D H D + R++ R+ K + Sbjct 314 ESGIVYCFSRKECEQIAGDLRERGISAD---------YYHADMDANMREKVHMRWSKNKL 364 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + ++ T GI+ V +VI+ +L + Y GR GR Sbjct 365 QVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGR 406 >sp|Q09884|DCR1_SCHPO Protein Dicer OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dcr1 PE=1 SV=1 Length=1374 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 36/93 (39%), Gaps = 9/93 (10%) Query 530 GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN 589 G GP +G +FS +K L +FK G LI T VA GID+ VI Sbjct 396 GHGPSDQG-EFSMTF-------RRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIR 447 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + YV GR RA I L E Sbjct 448 FNICRTVTQYVQSRGR-ARAMASKFLIFLNTEE 479 >sp|Q9D5L7|SPSB1_MOUSE SPRY domain-containing SOCS box protein 1 OS=Mus musculus OX=10090 GN=Spsb1 PE=1 SV=1 Length=273 Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 16/116 (14%) Query 137 VSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGT-----GKKSHNKQFDNY---GEEFTM 188 V+ D L VG++T+ + + +G+ G GK +K + + E F + Sbjct 117 VATADAPLHSVGYTTLVGN---NHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIV 173 Query 189 HDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNF 242 D+ LD+D G + F +G+ +G+AF +K + L+P + V + E++ + Sbjct 174 PDSFLVALDMDDGTLSFIVDGQYMGVAFR---GLKGKKLYPVVSAVWGHCEIRMRY 226 >sp|Q8K9I7|SYN_BUCAP Asparagine--tRNA ligase OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=asnS PE=3 SV=1 Length=466 Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/77 (30%), Positives = 41/77 (53%), Gaps = 9/77 (12%) Query 296 RELAEQTLNNIKQFKKYIDNP---KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDD 352 + L + +N+IK K YIDN +L++ L + + ++ +DI++ + + D+ Sbjct 275 KSLLKYCINDIKFLKNYIDNDIINRLKKFLSVNFIRIN-----YKDAIDILLNSKKKFDN 329 Query 353 LVSTG-KLNLSQVRFLV 368 +VS G LN RFLV Sbjct 330 VVSFGVDLNAEHERFLV 346 >sp|Q2H0G2|DCL1_CHAGB Dicer-like protein 1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DCL1 PE=3 SV=2 Length=1607 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 41/158 (26%), Positives = 71/158 (45%), Gaps = 23/158 (15%) Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 ++IL+GE+ R + +HK + I+F R + + +L +QQ P+ + L G Sbjct 466 LRILRGEF--RGV-DHKR-RCIVFVRQR-NVASLLTDLLQQ---PEMRIPGLEPGILVGG 517 Query 549 RKPHERKQNLE-----------RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 +P N + +FKKG++ + T VA G+DI +I L Sbjct 518 GRPEASYDNAKVTYRDQVLTIIKFKKGELNCIFATSVAEEGLDIPDCNVIIRYDL---NN 574 Query 598 NYVHRIGRVGRAERMG-LAISLVATEKEKVWYHVCSSR 634 + I GRA + G + I +V +E E+ VC ++ Sbjct 575 TLIQYIQSRGRARQEGSIYIHMVESENEEHVKKVCQNQ 612 >sp|P84634|DCL4_ARATH Dicer-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=DCL4 PE=1 SV=2 Length=1702 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 36/159 (23%), Positives = 62/159 (39%), Gaps = 36/159 (23%) Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG---------- 607 L+RF+ ++ L+ T V G+DI VI LP+ +++ GR Sbjct 541 LKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSRGRARMPQSEYAFLV 600 Query 608 ----------------RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 +RM L I+ ++E+ C + Y ++ E G C Sbjct 601 DSGNEKEMDLIENFKVNEDRMNLEITYRSSEE------TCPRLDEELY--KVHETGACIS 652 Query 652 WYNEMQLLSEIEEHL-NCTISQVEPDIKV-PVDEFDGKV 688 + + LL + L + Q +P+ + PVDEF G + Sbjct 653 GGSSISLLYKYCSRLPHDEFFQPKPEFQFKPVDEFGGTI 691 >sp|B7IEY7|UVRB_THEAB UvrABC system protein B OS=Thermosipho africanus (strain TCF52B) OX=484019 GN=uvrB PE=3 SV=1 Length=661 Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust. Identities = 24/107 (22%), Positives = 48/107 (45%), Gaps = 14/107 (13%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 ++A++ TK + L +Y I+ G + +H + ER + L++ ++GDV Sbjct 442 ERALVTVLTKKTAEKLAEYLIEMG---------IKALYIHSELDTIERVEVLKKLRRGDV 492 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDE-----KQNYVHRIGRVGR 608 ++ ++ G+D+ V V + E + + IGRV R Sbjct 493 EVVVGVNLLREGLDLPEVSLVAILDSDTEGFLRSETTLIQIIGRVAR 539 >sp|Q0HLI3|MIAB_SHESM tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase OS=Shewanella sp. (strain MR-4) OX=60480 GN=miaB PE=3 SV=1 Length=474 Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust. Identities = 28/125 (22%), Positives = 47/125 (38%), Gaps = 1/125 (1%) Query 41 DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS 100 D++ G S P I+ + + EG +I G S + + PY RG Sbjct 113 DMIEQVRRGEKAVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGE 172 Query 101 AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 + SD + + ++ E G R L + + Y + HD G+C + G Sbjct 173 EVSRPSDDIILEIAQLAE-QGVREVNLLGQNVNAYRGATHDGGICTFAELLRYVAAIDGI 231 Query 161 DKFGF 165 D+ F Sbjct 232 DRIRF 236 >sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1 Length=713 Score = 35.0 bits (79), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 9/100 (9%) Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AII+C + CD+L + G S H R L+ + + Sbjct 259 AIIYCLERTTCDDLSVHLSSIG---------ISSAAYHAGLNSKMRSTVLDDWLSSKKQI 309 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ++ T GID V V + +P +++ GR GR Sbjct 310 IVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGR 349 >sp|Q3ATT8|UVRB_CHLCH UvrABC system protein B OS=Chlorobium chlorochromatii (strain CaD3) OX=340177 GN=uvrB PE=3 SV=1 Length=681 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 9/80 (11%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +A++ TK ++L +F + G C LH + K ER Q L + GD+ Sbjct 452 KALVMTLTKRMSEDLHDFFRKAG---------IRCRYLHSEIKSLERMQILRELRAGDID 502 Query 568 FLICTDVAARGIDIHGVPYV 587 L+ ++ G+D+ V V Sbjct 503 VLVGVNLLREGLDLPEVSLV 522 >sp|Q96BD6|SPSB1_HUMAN SPRY domain-containing SOCS box protein 1 OS=Homo sapiens OX=9606 GN=SPSB1 PE=1 SV=1 Length=273 Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 16/116 (14%) Query 137 VSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGT-----GKKSHNKQFDNY---GEEFTM 188 V+ D L VG++T+ + + +G+ G GK +K + + E F + Sbjct 117 VATADAPLHSVGYTTLVGN---NHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIV 173 Query 189 HDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNF 242 D+ LD+D G + F +G+ +G+AF +K + L+P + V + E++ + Sbjct 174 PDSFLVALDMDDGTLSFIVDGQYMGVAFR---GLKGKKLYPVVSAVWGHCEIRMRY 226 >sp|Q5E9X6|SPSB1_BOVIN SPRY domain-containing SOCS box protein 1 OS=Bos taurus OX=9913 GN=SPSB1 PE=2 SV=1 Length=273 Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust. Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 16/116 (14%) Query 137 VSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGT-----GKKSHNKQFDNY---GEEFTM 188 V+ D L VG++T+ + + +G+ G GK +K + + E F + Sbjct 117 VATADAPLHSVGYTTLVGN---NHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIV 173 Query 189 HDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNF 242 D+ LD+D G + F +G+ +G+AF +K + L+P + V + E++ + Sbjct 174 PDSFLVALDMDDGTLSFIVDGQYMGVAFR---GLKGKKLYPVVSAVWGHCEIRMRY 226 >sp|Q0HXT7|MIAB_SHESR tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase OS=Shewanella sp. (strain MR-7) OX=60481 GN=miaB PE=3 SV=1 Length=474 Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/125 (22%), Positives = 47/125 (38%), Gaps = 1/125 (1%) Query 41 DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS 100 D++ G S P I+ + + EG +I G S + + PY RG Sbjct 113 DMIEQVRRGEKAVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGE 172 Query 101 AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 + SD + + ++ E G R L + + Y + HD G+C + G Sbjct 173 EVSRPSDDIILEIAQLAE-QGVREVNLLGQNVNAYRGATHDGGICTFAELLRYVAAIDGI 231 Query 161 DKFGF 165 D+ F Sbjct 232 DRIRF 236 >sp|Q2H679|MRH4_CHAGB ATP-dependent RNA helicase MRH4, mitochondrial OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=MRH4 PE=3 SV=1 Length=576 Score = 34.7 bits (78), Expect = 3.4, Method: Compositional matrix adjust. Identities = 75/348 (22%), Positives = 139/348 (40%), Gaps = 95/348 (27%) Query 281 KFLPNA----PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 KF P+ P+A+++ P+ EL +Q L K+ + P+ +DQ + Sbjct 260 KFEPHPNHARPRAIVLVPTSELVDQVLAASKK-----NFPR-----------GQDQTTAA 303 Query 337 EN-GVDIVVGTPG-RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM-HNQIPQ 393 + + +P R+ L+S+ S + DEAD L + ++ +++ +P Sbjct 304 STWSLPPRIFSPTWRIVTLISSRVCTTSSI-----DEADSLFDRSFAPETSKIVERAMPS 358 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIM-HFPTWVDLKGED--SVPDTVHHVVV---- 446 + Q+I+CSAT+ ++L + HFP V + + ++P V V+ Sbjct 359 LK------QLILCSATIP----RRLDNYLAAHFPNIVRIATPNLHAIPRRVQLGVIDVSK 408 Query 447 -PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV---RAIK 502 P+ P T L SH H T A P W + + KG A+ R Sbjct 409 DPLPPTTSWL-----ASH------HGLCQT--SARPPRRWPSTL-VSKGIDAIALHRDTP 454 Query 503 EHKMDQAI-IFCRT------KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 EH+ + + F T K + + +Q + + GG K+ Sbjct 455 EHRQSEMLNSFTTTEPMRLSKAEVEANKQAALAKAGGVSKR------------------- 495 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 + + ++ TD+A+RGID V +V+ +P +++HR+ Sbjct 496 ------HLANTKVIVATDLASRGIDTLAVRHVVLYDVPHTTIDFIHRL 537 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 32/70 (46%), Gaps = 19/70 (27%) Query 25 PTDIQAESIPLILGGG-------------------DVLMAAETGSGKTGAFSIPVIQIVY 65 PT +Q +IP +LG + L+AAETGSGKT A+ +P+I + Sbjct 167 PTPVQRLAIPALLGQRIGQQRETNHRRAAPESKREEFLLAAETGSGKTLAYLLPIINALK 226 Query 66 ETLKDQQEGK 75 D + K Sbjct 227 VAEADDVDAK 236 >sp|A6RIS1|MPH1_BOTFB ATP-dependent DNA helicase MPH1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=mph1 PE=3 SV=2 Length=1229 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/73 (26%), Positives = 35/73 (48%), Gaps = 1/73 (1%) Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + + +FK G + ++ T + G+DI V ++ + R+GR GR +R G Sbjct 693 ETIRKFKAGGINVIVATSIGEEGLDIGEVDLIVCYDSSSSPIRMLQRMGRTGR-KRAGKI 751 Query 616 ISLVATEKEKVWY 628 + L+ KE+ Y Sbjct 752 VLLLMRGKEEDSY 764 >sp|A8F8W9|UVRB_PSELT UvrABC system protein B OS=Pseudothermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / NBRC 107922 / TMO) OX=416591 GN=uvrB PE=3 SV=1 Length=656 Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust. Identities = 25/109 (23%), Positives = 50/109 (46%), Gaps = 18/109 (17%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 ++A+I TK + L +Y ++ G + +H + ER + L++ ++GDV Sbjct 442 ERALITVLTKKTAEKLSEYLVEMG---------IKSLYIHSELDAIERIEVLKKLRRGDV 492 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNY-------VHRIGRVGR 608 ++ ++ G+D+ V V L +K+ + + IGRV R Sbjct 493 DAVVGINLLREGLDLPEVSLV--AILDSDKEGFLRSETTLIQIIGRVAR 539 >sp|A7EFH4|MPH1_SCLS1 ATP-dependent DNA helicase mph1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=mph1 PE=3 SV=1 Length=1235 Score = 34.7 bits (78), Expect = 3.8, Method: Compositional matrix adjust. Identities = 19/73 (26%), Positives = 35/73 (48%), Gaps = 1/73 (1%) Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + + +FK G + ++ T + G+DI V ++ + R+GR GR +R G Sbjct 687 ETIRKFKAGGINVIVATSIGEEGLDIGEVDLIVCYDSSSSPIRMLQRMGRTGR-KRAGKI 745 Query 616 ISLVATEKEKVWY 628 + L+ KE+ Y Sbjct 746 VLLLMRGKEEDSY 758 >sp|A3GH78|MPH1_PICST ATP-dependent DNA helicase MPH1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=MPH1 PE=3 SV=3 Length=1050 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 36/71 (51%), Gaps = 1/71 (1%) Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 +K+ ++ FK+G L+ T + G+DI V +I + R+GR GR +R G Sbjct 531 QKEIIKNFKQGTYNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTGR-KRDG 589 Query 614 LAISLVATEKE 624 + L ++ +E Sbjct 590 KVVLLFSSNEE 600 >sp|A0KTX4|MIAB_SHESA tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase OS=Shewanella sp. (strain ANA-3) OX=94122 GN=miaB PE=3 SV=1 Length=474 Score = 34.3 bits (77), Expect = 4.4, Method: Compositional matrix adjust. Identities = 28/125 (22%), Positives = 47/125 (38%), Gaps = 1/125 (1%) Query 41 DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS 100 D++ G S P I+ + + EG +I G S + + PY RG Sbjct 113 DMIDQVRRGEKAVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGE 172 Query 101 AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 + SD + + ++ E G R L + + Y + HD G+C + G Sbjct 173 EVSRPSDDIILEIAQLAE-QGVREVNLLGQNVNAYRGATHDGGICTFAELLRYVAAIDGI 231 Query 161 DKFGF 165 D+ F Sbjct 232 DRIRF 236 >sp|Q7SDF3|MPH1_NEUCR ATP-dependent DNA helicase mph1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mph1 PE=3 SV=1 Length=1168 Score = 34.7 bits (78), Expect = 4.5, Method: Compositional matrix adjust. Identities = 20/70 (29%), Positives = 34/70 (49%), Gaps = 1/70 (1%) Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + +E+FK G L+ T + G+DI V ++ + R+GR GR +R G Sbjct 568 ETIEKFKNGAHNVLVATSIGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGR-KRAGNI 626 Query 616 ISLVATEKEK 625 + L+ KE+ Sbjct 627 VLLLMKGKEE 636 >sp|Q9KTE0|MIAB_VIBCH tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=miaB PE=3 SV=1 Length=474 Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust. Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 3/126 (2%) Query 41 DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS 100 +++ ++T S P I+ + + EG +I G S + + PY RG Sbjct 113 EMIKQSQTSDAPVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGE 172 Query 101 AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVG-WSTMQASLDLG 159 + D + + ++ E G R L + + Y + HD G+C + A++D G Sbjct 173 EVSRPMDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATID-G 230 Query 160 TDKFGF 165 D+ F Sbjct 231 IDRIRF 236 >sp|A5F2X6|MIAB_VIBC3 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=miaB PE=3 SV=1 Length=474 Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust. Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 3/126 (2%) Query 41 DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS 100 +++ ++T S P I+ + + EG +I G S + + PY RG Sbjct 113 EMIKQSQTSDAPVMDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTYCVVPYTRGE 172 Query 101 AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVG-WSTMQASLDLG 159 + D + + ++ E G R L + + Y + HD G+C + A++D G Sbjct 173 EVSRPMDDVLFEIAQLAE-QGVREVNLLGQNVNAYRGATHDGGICSFAELLRLVATID-G 230 Query 160 TDKFGF 165 D+ F Sbjct 231 IDRIRF 236 >sp|Q5AQN1|CCLA_EMENI COMPASS component cclA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cclA PE=3 SV=1 Length=607 Score = 34.3 bits (77), Expect = 4.6, Method: Compositional matrix adjust. Identities = 30/127 (24%), Positives = 47/127 (37%), Gaps = 27/127 (21%) Query 97 DRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEV------------------- 137 D +A D L + E WH RA +G +YYE Sbjct 183 DSPAAILFSKDALAVTTNE--PWHTARANVCAREGTYYYEARIISGIMSSSEATTSNGSN 240 Query 138 SCHDQGLCRVGWSTMQASLD--LGTDKFGFGFGGTGKKSHNKQFDNY----GEEFTMHDT 191 + +G R+G++ +A LD +G D +G+G + N+ Y GE D Sbjct 241 ALPSRGHVRLGFARREADLDVNVGVDCYGYGIRDVNGEVVNRMRCEYFFPKGESIREGDV 300 Query 192 IGCYLDI 198 IG + + Sbjct 301 IGMLITL 307 >sp|Q3Z5V2|RAPA_SHISS RNA polymerase-associated protein RapA OS=Shigella sonnei (strain Ss046) OX=300269 GN=rapA PE=3 SV=1 Length=968 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|A8ALP3|RAPA_CITK8 RNA polymerase-associated protein RapA OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=rapA PE=3 SV=1 Length=968 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 30/163 (18%), Positives = 63/163 (39%), Gaps = 25/163 (15%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGHLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGD--VRFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + ++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFSEEDSGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WY--------HVCSSRGKGCYNT 641 + + + + + V WY H C + G+ Y+T Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPT-GRAIYDT 645 >sp|O59025|HELS_PYRHO ATP-dependent DNA helicase Hel308 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=hel308 PE=3 SV=1 Length=715 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 19/168 (11%) Query 249 FPPKDGFVA--LSKAPDGYIVKSQHSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQT 302 +PP+ + + K + I SG + + + L KA+ + P + LAE+ Sbjct 25 YPPQAEALTSGILKGENALIAIPTASGKTLIAEIAIVNRLLKEGGKAVYLVPLKALAEE- 83 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS 362 K+FK + + L+ + G ++D+ G DI++ T + D L+ G + Sbjct 84 --KFKEFKDW-EELGLKVAMATGDYDSKDEWL---GGYDIIIATAEKFDSLLRHGSSWIR 137 Query 363 QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 V+ LV+DE + G D + I Q+ + R Q+I SAT+ Sbjct 138 NVKVLVVDEIHLI---GSRDRGATLEFIITQMLN---RAQIIGLSATI 179 >sp|Q7UDT5|RAPA_SHIFL RNA polymerase-associated protein RapA OS=Shigella flexneri OX=623 GN=rapA PE=3 SV=3 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|Q0T8D8|RAPA_SHIF8 RNA polymerase-associated protein RapA OS=Shigella flexneri serotype 5b (strain 8401) OX=373384 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B7LVT0|RAPA_ESCF3 RNA polymerase-associated protein RapA OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73) OX=585054 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B1LFZ3|RAPA_ECOSM RNA polymerase-associated protein RapA OS=Escherichia coli (strain SMS-3-5 / SECEC) OX=439855 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|Q8FL92|RAPA_ECOL6 RNA polymerase-associated protein RapA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rapA PE=3 SV=3 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|Q0TLT1|RAPA_ECOL5 RNA polymerase-associated protein RapA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) OX=362663 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B7M0F4|RAPA_ECO8A RNA polymerase-associated protein RapA OS=Escherichia coli O8 (strain IAI1) OX=585034 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B7NHG5|RAPA_ECO7I RNA polymerase-associated protein RapA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) OX=585057 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B7UIA5|RAPA_ECO27 RNA polymerase-associated protein RapA OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) OX=574521 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|A7ZHF0|RAPA_ECO24 RNA polymerase-associated protein RapA OS=Escherichia coli O139:H28 (strain E24377A / ETEC) OX=331111 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|Q1RGE0|RAPA_ECOUT RNA polymerase-associated protein RapA OS=Escherichia coli (strain UTI89 / UPEC) OX=364106 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B6HZ39|RAPA_ECOSE RNA polymerase-associated protein RapA OS=Escherichia coli (strain SE11) OX=409438 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B7N7T3|RAPA_ECOLU RNA polymerase-associated protein RapA OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|P60240|RAPA_ECOLI RNA polymerase-associated protein RapA OS=Escherichia coli (strain K12) OX=83333 GN=rapA PE=1 SV=2 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B1IRB9|RAPA_ECOLC RNA polymerase-associated protein RapA OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks) OX=481805 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|C4ZPY3|RAPA_ECOBW RNA polymerase-associated protein RapA OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|P60241|RAPA_ECO57 RNA polymerase-associated protein RapA OS=Escherichia coli O157:H7 OX=83334 GN=rapA PE=3 SV=2 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B7L4I0|RAPA_ECO55 RNA polymerase-associated protein RapA OS=Escherichia coli (strain 55989 / EAEC) OX=585055 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B7MAI2|RAPA_ECO45 RNA polymerase-associated protein RapA OS=Escherichia coli O45:K1 (strain S88 / ExPEC) OX=585035 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|A1A7A6|RAPA_ECOK1 RNA polymerase-associated protein RapA OS=Escherichia coli O1:K1 / APEC OX=405955 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|A7ZW09|RAPA_ECOHS RNA polymerase-associated protein RapA OS=Escherichia coli O9:H4 (strain HS) OX=331112 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B2U265|RAPA_SHIB3 RNA polymerase-associated protein RapA OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) OX=344609 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 5.0, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|A6QPH9|ZMYM5_BOVIN Zinc finger MYM-type protein 5 OS=Bos taurus OX=9913 GN=ZMYM5 PE=2 SV=2 Length=673 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 15/106 (14%) Query 585 PYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 P V N P + + Y RI + E+ + L +T K+ V+ C G+G Sbjct 543 PQVRNFNFPKDSTGRKFSETYYTRI--LANGEKTTRSWLLYSTSKDSVFCLYCKLFGEG- 599 Query 639 YNTRLKEDGGCTIWYNEMQLLSEIEE---HLNCTI--SQVEPDIKV 679 +LK + GC W + +LS+ EE H+N ++ S+++ D+K Sbjct 600 -KNQLKNENGCRDWQHLSHILSKHEESEMHINNSVKYSKLKSDLKT 644 >sp|Q32K36|RAPA_SHIDS RNA polymerase-associated protein RapA OS=Shigella dysenteriae serotype 1 (strain Sd197) OX=300267 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|B7MNR6|RAPA_ECO81 RNA polymerase-associated protein RapA OS=Escherichia coli O81 (strain ED1a) OX=585397 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|Q326H6|RAPA_SHIBS RNA polymerase-associated protein RapA OS=Shigella boydii serotype 4 (strain Sb227) OX=300268 GN=rapA PE=3 SV=1 Length=968 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + +++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 >sp|Q8CX45|MIAB_SHEON tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=miaB PE=3 SV=1 Length=474 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 26/109 (24%), Positives = 43/109 (39%), Gaps = 1/109 (1%) Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV 116 S P I+ + + EG +I G S + + PY RG + SD + + ++ Sbjct 129 SFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPSDDIILEIAQL 188 Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGF 165 E G R L + + Y + HD G+C + G D+ F Sbjct 189 AE-QGVREVNLLGQNVNAYRGATHDGGICTFAELLRYVAAIDGIDRIRF 236 >sp|Q2URJ5|MPH1_ASPOR ATP-dependent DNA helicase mph1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=mph1 PE=3 SV=2 Length=1129 Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 +++FKKG ++ T + G+DI V ++ + R+GR GR +R G + Sbjct 748 VQKFKKGTYNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGR-KRAGNIVL 806 Query 618 LVATEKEKVWY 628 L+ KE+ Y Sbjct 807 LLMEGKEEESY 817 >sp|B6DMK2|MER3_ORYSJ ATP-dependent DNA helicase MER3 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=MER3 PE=2 SV=1 Length=1205 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 52/133 (39%), Gaps = 26/133 (20%) Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVT----------LPDEKQNYVHRIGRVGRAE 610 F KGD++ L T+ A GI++ VI T + E+ + GR GR Sbjct 363 FLKGDIQILCTTNTLAHGINLPAHTVVIKSTQFFNKEKGLYVEYERSMVLQMCGRAGRPP 422 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 ++ T +E V H+ + GC E QLL EHLN I Sbjct 423 FDDTGTIIIMTRRETV--HLYENLLNGCEMV-------------ESQLLPCAVEHLNAEI 467 Query 671 SQVE-PDIKVPVD 682 Q+ DI + ++ Sbjct 468 VQLTVSDITLAIE 480 >sp|Q2VF18|DCL2_CRYPA Dicer-like protein 2 OS=Cryphonectria parasitica OX=5116 GN=DCL-2 PE=3 SV=1 Length=1451 Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust. Identities = 22/72 (31%), Positives = 33/72 (46%), Gaps = 2/72 (3%) Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 Q LE F++G L+ T V GID+ +I P+ + ++ R GR R + L Sbjct 484 QCLEAFREGRKNMLVATSVLEEGIDVPACNLIICFDKPNNLRAFIQRRGR-ARMRQSHLY 542 Query 616 ISLVATEKEKVW 627 + V E E W Sbjct 543 L-FVEDEAEADW 553 >sp|Q4WKB5|MPH1_ASPFU ATP-dependent DNA helicase mph1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=mph1 PE=3 SV=1 Length=1101 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 +++FKKG ++ T + G+DI V ++ + R+GR GR +R G + Sbjct 713 VQKFKKGTYNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGR-KRAGNIVL 771 Query 618 LVATEKEKVWY 628 L+ KE+ Y Sbjct 772 LLMQGKEEESY 782 >sp|B0XMV6|MPH1_ASPFC ATP-dependent DNA helicase mph1 OS=Aspergillus fumigatus (strain CBS 144.89 / FGSC A1163 / CEA10) OX=451804 GN=mph1 PE=3 SV=1 Length=1101 Score = 34.3 bits (77), Expect = 6.1, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 +++FKKG ++ T + G+DI V ++ + R+GR GR +R G + Sbjct 713 VQKFKKGTYNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGR-KRAGNIVL 771 Query 618 LVATEKEKVWY 628 L+ KE+ Y Sbjct 772 LLMQGKEEESY 782 >sp|A0LJZ1|PGK_SYNFM Phosphoglycerate kinase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) OX=335543 GN=pgk PE=3 SV=1 Length=397 Score = 33.9 bits (76), Expect = 6.1, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 34/67 (51%), Gaps = 9/67 (13%) Query 295 SRELAE--QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDD 352 +RE A Q N IK F+K +DNP ++IGG ++ VLE+ + R+D Sbjct 162 ARECAAGYQLENEIKYFRKAMDNPARPMAMVIGGAKVSTKIGVLEHLIS-------RVDF 214 Query 353 LVSTGKL 359 LV G + Sbjct 215 LVIGGAM 221 >sp|A1BI09|UVRB_CHLPD UvrABC system protein B OS=Chlorobium phaeobacteroides (strain DSM 266 / SMG 266 / 2430) OX=290317 GN=uvrB PE=3 SV=1 Length=685 Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 40/89 (45%), Gaps = 11/89 (12%) Query 501 IKEH--KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 I+ H K +A++ TK ++L+ YF + G LH + K ER Q L Sbjct 443 IRRHTAKGHKALVMTLTKRMSEDLDDYFKKVG---------IRSRYLHSEIKSLERIQIL 493 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + GDV L+ ++ G+D+ V V Sbjct 494 RELRAGDVEVLVGVNLLREGLDLPEVSLV 522 >sp|B4LMQ3|FBSP1_DROVI F-box/SPRY domain-containing protein 1 OS=Drosophila virilis OX=7244 GN=Fsn PE=3 SV=1 Length=252 Score = 33.5 bits (75), Expect = 6.4, Method: Compositional matrix adjust. Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 21/138 (15%) Query 123 RATKGLMKGKHYYEVSCHDQ--GLCRVGWSTMQASLD-------LGTDKFGFGFG----- 168 R G +G+H +EV + +G ST +A+L LG+D +G+ Sbjct 111 RGKIGFRQGRHAWEVIWEGPLGTVAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENH 170 Query 169 --GTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQA 226 G N N ++ + + I LD D + F KN + LG+AF P K Sbjct 171 LLHNGDMQGNYPLLNNAPKYQVGERIRVILDCDDNTLSFEKNYEFLGVAFRGLPDKK--- 227 Query 227 LFP--ACVLKNAELKFNF 242 L+P + V N E+ + Sbjct 228 LYPTVSAVYGNTEVSMVY 245 >sp|Q290L5|FBSP1_DROPS F-box/SPRY domain-containing protein 1 OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=Fsn PE=3 SV=1 Length=255 Score = 33.5 bits (75), Expect = 6.4, Method: Compositional matrix adjust. Identities = 43/168 (26%), Positives = 64/168 (38%), Gaps = 22/168 (13%) Query 94 NPYDRGSAFAIGSDGLCCQSREVKE-WHGCRATKGLMKGKHYYEVSCHDQ--GLCRVGWS 150 NP D I +G V + RA G G+H +EV + +G S Sbjct 84 NPSDCSRNVYIKPNGFTLHRNPVAQSTDAARAKIGFRHGRHAWEVIWEGPLGTVAVIGIS 143 Query 151 TMQASLD-------LGTDKFGFGFG-------GTGKKSHNKQFDNYGEEFTMHDTIGCYL 196 T +A+L LG+D +G+ G N ++ + + I L Sbjct 144 TKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGGYPLLNNAPKYQVGERIRVIL 203 Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNF 242 D D + F KN + LG+AF P K LFP + V N E+ + Sbjct 204 DCDDNTLSFEKNYEFLGVAFRGLPDKK---LFPTVSAVYGNTEVSMVY 248 >sp|B4GBN7|FBSP1_DROPE F-box/SPRY domain-containing protein 1 OS=Drosophila persimilis OX=7234 GN=Fsn PE=3 SV=1 Length=255 Score = 33.5 bits (75), Expect = 6.4, Method: Compositional matrix adjust. Identities = 43/168 (26%), Positives = 64/168 (38%), Gaps = 22/168 (13%) Query 94 NPYDRGSAFAIGSDGLCCQSREVKE-WHGCRATKGLMKGKHYYEVSCHDQ--GLCRVGWS 150 NP D I +G V + RA G G+H +EV + +G S Sbjct 84 NPSDCSRNVYIKPNGFTLHRNPVAQSTDAARAKIGFRHGRHAWEVIWEGPLGTVAVIGIS 143 Query 151 TMQASLD-------LGTDKFGFGFG-------GTGKKSHNKQFDNYGEEFTMHDTIGCYL 196 T +A+L LG+D +G+ G N ++ + + I L Sbjct 144 TKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGGYPLLNNAPKYQVGERIRVIL 203 Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP--ACVLKNAELKFNF 242 D D + F KN + LG+AF P K LFP + V N E+ + Sbjct 204 DCDDNTLSFEKNYEFLGVAFRGLPDKK---LFPTVSAVYGNTEVSMVY 248 >sp|Q07XC8|RAPA_SHEFN RNA polymerase-associated protein RapA OS=Shewanella frigidimarina (strain NCIMB 400) OX=318167 GN=rapA PE=3 SV=1 Length=968 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 31/143 (22%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 ++ + +K H+ + +I +LE+ + G H D ER Sbjct 493 DWLIEFLKSHRSKKVLIIASQAETALSLEEALRTREG--------IQATVFHEDMSIIER 544 Query 555 KQNLERF--KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR-AER 611 + F ++G + LIC+++ + G + ++I LP RIGR+ R ++ Sbjct 545 DKAGAYFAQEEGGAQALICSEIGSEGRNFQFASHLILFDLPLNPDLLEQRIGRLDRIGQQ 604 Query 612 MGLAISL-----VATEKEKVWYH 629 + I L A E+ WYH Sbjct 605 NDIQIHLPYLRDTAQERLMRWYH 627 >sp|A1D4V5|MPH1_NEOFI ATP-dependent DNA helicase mph1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=mph1 PE=3 SV=1 Length=1111 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 +++FKKG ++ T + G+DI V ++ + R+GR GR +R G + Sbjct 723 VQKFKKGTYNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGR-KRAGNIVL 781 Query 618 LVATEKEKVWY 628 L+ KE+ Y Sbjct 782 LLMQGKEEESY 792 >sp|Q19546|WRN_CAEEL ATP-dependent helicase wrn-1 OS=Caenorhabditis elegans OX=6239 GN=wrn-1 PE=3 SV=2 Length=1056 Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 9/100 (9%) Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 II+C+TK D++ + G + H H ++R++ F + + Sbjct 449 TIIYCQTKQMVDDVNCVLRRIGV---RSAH------YHAGLTKNQREKAHTDFMRDKITT 499 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ++ T GID V VI+ P+ ++Y IGR GR Sbjct 500 IVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGRAGR 539 >sp|Q9CK01|RAPA_PASMU RNA polymerase-associated protein RapA OS=Pasteurella multocida (strain Pm70) OX=272843 GN=rapA PE=3 SV=1 Length=967 Score = 33.9 bits (76), Expect = 7.4, Method: Compositional matrix adjust. Identities = 25/143 (17%), Positives = 57/143 (40%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + +K H+ ++ ++ CR LEQ ++ H ER Sbjct 491 EWLITFLKNHREEKVLVICRHANTAIQLEQAL--------REKEAIRAAVFHEKLSIVER 542 Query 555 KQNLERFKKGD--VRFLICTDVAARGIDIHGVPYVINVTLPDEK---QNYVHRIGRVGRA 609 + F + + + L+ + + + G + +++ LPD+ + + R+ R+G+ Sbjct 543 DRAAAYFAQQEDGAQLLLSSSIGSEGRNFQFASHLVLFNLPDDPDLLEQCIGRLDRIGQR 602 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + A + V WYH Sbjct 603 RDIQIHVPCFADTAQVVLARWYH 625 >sp|Q4WRW0|SSH4_ASPFU Protein ssh4 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=ssh4 PE=3 SV=2 Length=507 Score = 33.5 bits (75), Expect = 7.6, Method: Compositional matrix adjust. Identities = 31/125 (25%), Positives = 50/125 (40%), Gaps = 11/125 (9%) Query 133 HYYEVSCHDQ---GLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YGEE 185 +Y+E +++ L +G +T L G K + TG + +N+ F YG Sbjct 223 YYWEAKIYEKPESTLISIGMTTKPYPLFRLPGFHKTSVAYLSTGHRRYNQPFSASPYGPA 282 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA-ELKFNFGE 244 D +G G + F++NGK L ++ K Q FP + NFG+ Sbjct 283 LAQGDVVGVGYRPRSGTIFFTRNGKKLE---DVVHGAKTQNFFPTVGANGPCTVHVNFGQ 339 Query 245 EEFKF 249 F F Sbjct 340 MGFVF 344 >sp|A8XT88|FBSP1_CAEBR F-box/SPRY domain-containing protein 1 OS=Caenorhabditis briggsae OX=6238 GN=fsn-1 PE=3 SV=1 Length=332 Score = 33.5 bits (75), Expect = 7.7, Method: Compositional matrix adjust. Identities = 41/171 (24%), Positives = 73/171 (43%), Gaps = 24/171 (14%) Query 91 WQMNPYDRGSAFAIGSDGLCCQSREVKE-WHGCRATKGLMKGKHYYEVSCHDQ--GLCRV 147 W N R + I ++G + V + G R +G+ +G H ++++ + V Sbjct 160 WNTNDISRNNY--IRTNGFTVHRQPVAQSTDGVRGKRGVSQGVHAFDITWDGPLGTVAVV 217 Query 148 GWSTMQASLD-------LGTDKFGFGFGGTGKK-SHNK-QFDNYGE-----EFTMHDTIG 193 G++T A+L LG+D +G+ HN Q Y + ++ + + I Sbjct 218 GFATKHAALHCVGYIALLGSDDQSWGWNLVDNVLMHNGVQLGVYPKMNNPPKYEVGEKIR 277 Query 194 CYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPA--CVLKNAELKFNF 242 +D D F +N + LG+AF P ++ LFPA V N E+ + Sbjct 278 LVIDCDMHVAYFERNSEFLGIAFSHIPPLR---LFPAVCAVYGNTEVTMVY 325 >sp|Q2T9X3|SPRY7_BOVIN SPRY domain-containing protein 7 OS=Bos taurus OX=9913 GN=SPRYD7 PE=2 SV=1 Length=196 Score = 32.7 bits (73), Expect = 8.0, Method: Compositional matrix adjust. Identities = 42/198 (21%), Positives = 77/198 (39%), Gaps = 22/198 (11%) Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 V+ L+ ++G G +K +V Q++ G+ I +G R + GC Sbjct 5 VFCCLRCCRDGGTGHIPLKEMPAV----QLDTQHMGTDVVIVKNG-----RRICGTGGCL 55 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD---LGTDKFGFGFGGTGKKSHNKQFD 180 A+ L + K Y+E G+ +G +T + +L+ LG D G HN + Sbjct 56 ASAPLHQNKSYFEFKIQSTGIWGIGVATQKVNLNQIPLGRDVHSLVMRNDGALYHNNEEK 115 Query 181 NYGEEFTMH---DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE 237 N ++ D +G + D + NGK++ P ++P + ++ Sbjct 116 NRLPANSLPQEGDVVG--ITYDHVELNVYLNGKNM----HCPASGIRGTVYPVVYVDDSA 169 Query 238 LKFNFGEEEFKFPPKDGF 255 + + EF P GF Sbjct 170 I-LDCQFSEFYHTPPPGF 186 >sp|F4IDQ6|NIH_ARATH DExH-box ATP-dependent RNA helicase DExH2 OS=Arabidopsis thaliana OX=3702 GN=NIH PE=1 SV=1 Length=1576 Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust. Identities = 23/90 (26%), Positives = 36/90 (40%), Gaps = 18/90 (20%) Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ- 597 +F +CLH E+K+ R +G + ++ T++A + I V YVI+ EK Sbjct 606 KFIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSY 665 Query 598 -----------------NYVHRIGRVGRAE 610 N R GR GR + Sbjct 666 DPYNDVSTLQSSWVSKANAKQRAGRAGRCQ 695 >sp|Q9HE09|MFH2_SCHPO Putative ATP-dependent DNA helicase fml2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fml2 PE=3 SV=1 Length=783 Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust. Identities = 16/75 (21%), Positives = 35/75 (47%), Gaps = 0/75 (0%) Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ++K+ +++F+ G + L+ T + G+DI +I + R+GR GR + Sbjct 519 QQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSSPIRTIQRMGRTGRKKSG 578 Query 613 GLAISLVATEKEKVW 627 + + L ++ W Sbjct 579 KVFVLLTEDCEDSKW 593 >sp|Q1DY43|MPH1_COCIM ATP-dependent DNA helicase MPH1 OS=Coccidioides immitis (strain RS) OX=246410 GN=MPH1 PE=3 SV=1 Length=1110 Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 42/90 (47%), Gaps = 8/90 (9%) Query 553 ERKQNLE---RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 ++K LE +FK G ++ T + G+DI V +I + R+GR GR Sbjct 741 DQKTQLEVVGKFKTGTYNTIVATSIGEEGLDIGEVDLIICYDGHSSPIRMLQRMGRTGR- 799 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 +R G I L++ KE+ Y S+ K Y Sbjct 800 KRAGNIILLLSKGKEEESY----SKAKDSY 825 >sp|P57381|MFD_BUCAI Transcription-repair-coupling factor OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=mfd PE=3 SV=1 Length=812 Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%) Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI-G 604 HG K + K+ + F LICT + G+DI +I + +H++ G Sbjct 507 HGQMKNIDLKKVMNEFYNNKFNVLICTTIIESGVDIARANTIIIENSDHFGLSQLHQLRG 566 Query 605 RVGRAERMGLAISLV 619 R+GR+ A+ LV Sbjct 567 RIGRSNNQAYALLLV 581 >sp|C0Q5F4|RAPA_SALPC RNA polymerase-associated protein RapA OS=Salmonella paratyphi C (strain RKS4594) OX=476213 GN=rapA PE=3 SV=1 Length=968 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 16/143 (11%) Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E+ + + H+ + ++ C LEQ ++ G H ER Sbjct 492 EWLMGYLTSHRSQKVLVICTKATTALQLEQVLREREG--------IRAAVFHEGMSIIER 543 Query 555 KQNLERFKKGDV--RFLICTDVAARGIDIHGVPYVINVTL---PDEKQNYVHRIGRVGRA 609 + F + D + L+C+++ + G + ++ L PD + + R+ R+G+A Sbjct 544 DRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQA 603 Query 610 ERMGLAISLVATEKEKV---WYH 629 + + + + + V WYH Sbjct 604 HDIQIHVPYLEKTAQSVLVRWYH 626 Lambda K H a alpha 0.318 0.137 0.415 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0410 0.140 1.90 42.6 43.6 Effective search space used: 82703874496 Results from round 2 Query= sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sapiens OX=9606 GN=DDX1 PE=1 SV=2 Length=740 Score E Sequences producing significant alignments: (Bits) Value Sequences used in model and found again: sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sapi... 992 0.0 sp|Q4R7L5|DDX1_MACFA ATP-dependent RNA helicase DDX1 OS=Macaca fa... 991 0.0 sp|Q5NVJ8|DDX1_PONAB ATP-dependent RNA helicase DDX1 OS=Pongo abe... 990 0.0 sp|Q641Y8|DDX1_RAT ATP-dependent RNA helicase DDX1 OS=Rattus norv... 984 0.0 sp|Q91VR5|DDX1_MOUSE ATP-dependent RNA helicase DDX1 OS=Mus muscu... 984 0.0 sp|Q0IIK5|DDX1_BOVIN ATP-dependent RNA helicase DDX1 OS=Bos tauru... 981 0.0 sp|Q90WU3|DDX1_CHICK ATP-dependent RNA helicase DDX1 OS=Gallus ga... 979 0.0 sp|Q5XH91|DDX1_XENTR ATP-dependent RNA helicase DDX1 OS=Xenopus t... 947 0.0 sp|A2VD92|DDX1_XENLA ATP-dependent RNA helicase DDX1 OS=Xenopus l... 946 0.0 sp|Q9VNV3|DDX1_DROME ATP-dependent RNA helicase Ddx1 OS=Drosophil... 770 0.0 sp|Q55CP6|DDX1_DICDI Probable ATP-dependent RNA helicase ddx1 OS=... 641 0.0 sp|Q41741|IF4A_MAIZE Eukaryotic initiation factor 4A OS=Zea mays ... 362 1e-117 sp|Q2GWJ5|FAL1_CHAGB ATP-dependent RNA helicase FAL1 OS=Chaetomiu... 358 6e-116 sp|Q9P735|FAL1_NEUCR ATP-dependent RNA helicase fal-1 OS=Neurospo... 357 1e-115 sp|Q4IAA0|FAL1_GIBZE ATP-dependent RNA helicase FAL1 OS=Gibberell... 354 2e-114 sp|Q4P184|FAL1_USTMA ATP-dependent RNA helicase FAL1 OS=Ustilago ... 354 3e-114 sp|A4QU31|FAL1_PYRO7 ATP-dependent RNA helicase FAL1 OS=Pyricular... 353 7e-114 sp|Q4WEB4|FAL1_ASPFU ATP-dependent RNA helicase fal1 OS=Aspergill... 351 3e-113 sp|A1C595|FAL1_ASPCL ATP-dependent RNA helicase fal1 OS=Aspergill... 349 1e-112 sp|Q5AUL4|FAL1_EMENI ATP-dependent RNA helicase fal1 OS=Emericell... 349 2e-112 sp|A1D071|FAL1_NEOFI ATP-dependent RNA helicase fal1 OS=Neosartor... 349 2e-112 sp|A6QSQ0|FAL1_AJECN ATP-dependent RNA helicase FAL1 OS=Ajellomyc... 350 2e-112 sp|Q2UAK1|FAL1_ASPOR ATP-dependent RNA helicase fal1 OS=Aspergill... 348 3e-112 sp|Q0CAS8|FAL1_ASPTN ATP-dependent RNA helicase fal1 OS=Aspergill... 347 7e-112 sp|Q1DTB3|FAL1_COCIM ATP-dependent RNA helicase FAL1 OS=Coccidioi... 347 8e-112 sp|A5AAE5|FAL1_ASPNC ATP-dependent RNA helicase fal1 OS=Aspergill... 347 9e-112 sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10 OS=Nicot... 347 1e-111 sp|Q40467|IF414_TOBAC Eukaryotic initiation factor 4A-14 OS=Nicot... 347 2e-111 sp|Q40468|IF415_TOBAC Eukaryotic initiation factor 4A-15 OS=Nicot... 347 2e-111 sp|A7EM88|FAL1_SCLS1 ATP-dependent RNA helicase fal1 OS=Sclerotin... 345 5e-111 sp|A6S4N4|FAL1_BOTFB ATP-dependent RNA helicase fal1 OS=Botryotin... 345 6e-111 sp|P41381|IF4A8_TOBAC Eukaryotic initiation factor 4A-8 OS=Nicoti... 345 7e-111 sp|P35683|IF4A1_ORYSJ Eukaryotic initiation factor 4A-1 OS=Oryza ... 345 1e-110 sp|P41376|IF4A1_ARATH Eukaryotic initiation factor 4A-1 OS=Arabid... 344 1e-110 sp|Q24731|DDX1_DROVI ATP-dependent RNA helicase Ddx1 (Fragment) O... 344 1e-110 sp|Q40470|IF4A7_TOBAC Eukaryotic initiation factor 4A-7 OS=Nicoti... 344 1e-110 sp|Q40471|IF4A9_TOBAC Eukaryotic initiation factor 4A-9 OS=Nicoti... 344 2e-110 sp|Q6Z2Z4|IF4A3_ORYSJ Eukaryotic initiation factor 4A-3 OS=Oryza ... 344 3e-110 sp|P41378|IF4A_WHEAT Eukaryotic initiation factor 4A OS=Triticum ... 343 5e-110 sp|Q40465|IF411_TOBAC Eukaryotic initiation factor 4A-11 OS=Nicot... 342 8e-110 sp|P41379|IF4A2_NICPL Eukaryotic initiation factor 4A-2 OS=Nicoti... 342 2e-109 sp|Q10055|FAL1_SCHPO ATP-dependent RNA helicase fal1 OS=Schizosac... 341 2e-109 sp|P0CQ72|FAL1_CRYNJ ATP-dependent RNA helicase FAL1 OS=Cryptococ... 340 6e-109 sp|P0CQ73|FAL1_CRYNB ATP-dependent RNA helicase FAL1 OS=Cryptococ... 340 6e-109 sp|Q9VHS8|IF4A3_DROME Eukaryotic initiation factor 4A-III OS=Dros... 339 9e-109 sp|Q91VC3|IF4A3_MOUSE Eukaryotic initiation factor 4A-III OS=Mus ... 339 2e-108 sp|Q3B8Q2|IF4A3_RAT Eukaryotic initiation factor 4A-III OS=Rattus... 338 3e-108 sp|A6M931|IF4A3_PIG Eukaryotic initiation factor 4A-III OS=Sus sc... 338 3e-108 sp|Q2NL22|IF4A3_BOVIN Eukaryotic initiation factor 4A-III OS=Bos ... 338 3e-108 sp|P38919|IF4A3_HUMAN Eukaryotic initiation factor 4A-III OS=Homo... 338 4e-108 sp|B5FZY7|IF4A3_TAEGU Eukaryotic initiation factor 4A-III OS=Taen... 338 6e-108 sp|Q5ZM36|IF4A3_CHICK Eukaryotic initiation factor 4A-III OS=Gall... 337 6e-108 sp|Q9CAI7|IF4A3_ARATH Eukaryotic initiation factor 4A-3 OS=Arabid... 337 2e-107 sp|P27639|IF4A_CAEEL Eukaryotic initiation factor 4A OS=Caenorhab... 336 2e-107 sp|B7ZTW1|IF4A3_XENTR Eukaryotic initiation factor 4A-III OS=Xeno... 336 2e-107 sp|B5DG42|IF4A3_SALSA Eukaryotic initiation factor 4A-III OS=Salm... 335 3e-107 sp|Q7ZVA6|IF4A3_DANRE Eukaryotic initiation factor 4A-III OS=Dani... 335 4e-107 sp|Q4R3Q1|IF4A3_MACFA Eukaryotic initiation factor 4A-III OS=Maca... 334 1e-106 sp|Q10I26|IF43B_ORYSJ Eukaryotic initiation factor 4A-III homolog... 334 1e-106 sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida g... 339 1e-106 sp|P41377|IF4A2_ARATH Eukaryotic initiation factor 4A-2 OS=Arabid... 334 1e-106 sp|Q6C347|FAL1_YARLI ATP-dependent RNA helicase FAL1 OS=Yarrowia ... 334 2e-106 sp|Q5U526|I4A3A_XENLA Eukaryotic initiation factor 4A-III-A OS=Xe... 334 2e-106 sp|O42226|I4A3B_XENLA Eukaryotic initiation factor 4A-III-B OS=Xe... 334 3e-106 sp|Q5VNM3|IF43A_ORYSJ Eukaryotic initiation factor 4A-III homolog... 333 3e-106 sp|A5DIP0|DHH1_PICGU ATP-dependent RNA helicase DHH1 OS=Meyerozym... 337 4e-106 sp|O02494|IF4A_CRYPV Eukaryotic initiation factor 4A OS=Cryptospo... 332 6e-106 sp|Q12099|FAL1_YEAST ATP-dependent RNA helicase FAL1 OS=Saccharom... 330 2e-105 sp|A6ZXY5|FAL1_YEAS7 ATP-dependent RNA helicase FAL1 OS=Saccharom... 330 2e-105 sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyverom... 335 3e-105 sp|Q6CX73|FAL1_KLULA ATP-dependent RNA helicase FAL1 OS=Kluyverom... 330 3e-105 sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharom... 334 6e-105 sp|Q55D61|IF4A_DICDI Eukaryotic initiation factor 4A OS=Dictyoste... 329 7e-105 sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharom... 334 7e-105 sp|Q755N4|DBP2_EREGS ATP-dependent RNA helicase DBP2 OS=Eremothec... 333 3e-104 sp|Q94A52|RH2_ARATH Eukaryotic initiation factor 4A-III homolog O... 328 4e-104 sp|Q5B0J9|DBP2_EMENI ATP-dependent RNA helicase dbp2 OS=Emericell... 332 6e-104 sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomy... 331 7e-104 sp|P41380|IF4A3_NICPL Eukaryotic initiation factor 4A-3 OS=Nicoti... 326 9e-104 sp|A5DE68|FAL1_PICGU ATP-dependent RNA helicase FAL1 OS=Meyerozym... 326 9e-104 sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosac... 331 1e-103 sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Aspergill... 331 1e-103 sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia ... 330 3e-103 sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartor... 330 3e-103 sp|G0SFM2|DBP2_CHATD ATP-dependent RNA helicase DBP2 OS=Chaetomiu... 330 4e-103 sp|Q4PHU9|DBP2_USTMA ATP-dependent RNA helicase DBP2 OS=Ustilago ... 330 5e-103 sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida a... 330 5e-103 sp|Q2U070|DBP2_ASPOR ATP-dependent RNA helicase dbp2 OS=Aspergill... 329 6e-103 sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozym... 329 7e-103 sp|A7E449|DBP2_SCLS1 ATP-dependent RNA helicase dbp2 OS=Sclerotin... 329 1e-102 sp|A6SFW7|DBP2_BOTFB ATP-dependent RNA helicase dbp2 OS=Botryotin... 327 1e-102 sp|A6RGE3|DBP2_AJECN ATP-dependent RNA helicase DBP2 OS=Ajellomyc... 328 2e-102 sp|A2QC74|DBP2_ASPNC ATP-dependent RNA helicase dbp2 OS=Aspergill... 328 2e-102 sp|Q8Y8N0|CSHA_LISMO ATP-dependent RNA helicase CshA OS=Listeria ... 327 2e-102 sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=... 329 3e-102 sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioi... 327 3e-102 sp|Q501J6|DDX17_MOUSE Probable ATP-dependent RNA helicase DDX17 O... 330 3e-102 sp|Q2HBE7|DED1_CHAGB ATP-dependent RNA helicase DED1 OS=Chaetomiu... 332 3e-102 sp|Q5VQL1|RH14_ORYSJ DEAD-box ATP-dependent RNA helicase 14 OS=Or... 332 3e-102 sp|Q9P6U9|DED1_NEUCR ATP-dependent RNA helicase ded1 OS=Neurospor... 331 4e-102 sp|Q7SBC6|DBP2_NEUCR ATP-dependent RNA helicase dbp2 OS=Neurospor... 327 5e-102 sp|Q6BT27|FAL1_DEBHA ATP-dependent RNA helicase FAL1 OS=Debaryomy... 322 5e-102 sp|A1C6C4|DBP2_ASPCL ATP-dependent RNA helicase dbp2 OS=Aspergill... 327 6e-102 sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 O... 331 1e-101 sp|A7EJY3|DED1_SCLS1 ATP-dependent RNA helicase ded1 OS=Sclerotin... 330 1e-101 sp|P42305|DBPA_BACSU ATP-dependent RNA helicase DbpA OS=Bacillus ... 323 2e-101 sp|A6SEH9|DED1_BOTFB ATP-dependent RNA helicase ded1 OS=Botryotin... 330 2e-101 sp|A4QSS5|DBP2_PYRO7 ATP-dependent RNA helicase DBP2 OS=Pyricular... 325 2e-101 sp|P34580|DDX47_CAEEL Putative ATP-dependent RNA helicase T26G10.... 323 2e-101 sp|Q6CLR3|DED1_KLULA ATP-dependent RNA helicase DED1 OS=Kluyverom... 327 2e-101 sp|Q5L3G9|CSHA_GEOKA DEAD-box ATP-dependent RNA helicase CshA OS=... 322 3e-101 sp|A3GFV3|FAL1_PICST ATP-dependent RNA helicase FAL1 OS=Scheffers... 320 3e-101 sp|Q2H720|DBP2_CHAGB ATP-dependent RNA helicase DBP2 OS=Chaetomiu... 325 5e-101 sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida g... 326 5e-101 sp|Q4IF76|DBP2_GIBZE ATP-dependent RNA helicase DBP2 OS=Gibberell... 324 6e-101 sp|Q4I7K4|DED1_GIBZE ATP-dependent RNA helicase DED1 OS=Gibberell... 328 6e-101 sp|Q1DJF0|DED1_COCIM ATP-dependent RNA helicase DED1 OS=Coccidioi... 327 8e-101 sp|Q2UGK3|DED1_ASPOR ATP-dependent RNA helicase ded1 OS=Aspergill... 327 9e-101 sp|A4RHF1|DED1_PYRO7 ATP-dependent RNA helicase DED1 OS=Pyricular... 327 1e-100 sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Or... 321 2e-100 sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Ar... 321 2e-100 sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Ar... 324 2e-100 sp|P24346|DDX3_XENLA Putative ATP-dependent RNA helicase an3 OS=X... 327 3e-100 sp|A7EML8|RRP3_SCLS1 ATP-dependent rRNA helicase rrp3 OS=Scleroti... 320 3e-100 sp|Q755W0|FAL1_EREGS ATP-dependent RNA helicase FAL1 OS=Eremothec... 317 4e-100 sp|P24784|DBP1_YEAST ATP-dependent RNA helicase DBP1 OS=Saccharom... 324 4e-100 sp|A6ZWD3|DBP1_YEAS7 ATP-dependent RNA helicase DBP1 OS=Saccharom... 324 4e-100 sp|A5DWJ1|FAL1_LODEL ATP-dependent RNA helicase FAL1 OS=Lodderomy... 317 4e-100 sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharom... 324 5e-100 sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharom... 324 5e-100 sp|Q75B50|DED1_EREGS ATP-dependent RNA helicase DED1 OS=Eremothec... 324 5e-100 sp|Q9LYJ9|RH46_ARATH DEAD-box ATP-dependent RNA helicase 46 OS=Ar... 325 5e-100 sp|Q0UWA6|DED1_PHANO ATP-dependent RNA helicase DED1 OS=Phaeospha... 326 7e-100 sp|Q61656|DDX5_MOUSE Probable ATP-dependent RNA helicase DDX5 OS=... 323 9e-100 sp|Q9Z6C9|CSHA_LIMRT ATP-dependent RNA helicase CshA OS=Limosilac... 319 1e-99 sp|P17844|DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 OS=... 323 1e-99 sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergill... 325 1e-99 sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericel... 318 1e-99 sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptoc... 320 1e-99 sp|P0CQ77|DBP2_CRYNB ATP-dependent RNA helicase DBP2-A OS=Cryptoc... 320 1e-99 sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5 OS=... 323 1e-99 sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosartor... 325 1e-99 sp|P96614|CSHA_BACSU DEAD-box ATP-dependent RNA helicase CshA OS=... 319 1e-99 sp|Q4WP13|DED1_ASPFU ATP-dependent RNA helicase ded1 OS=Aspergill... 324 1e-99 sp|Q9C8J1|RH34_ARATH DEAD-box ATP-dependent RNA helicase 34 OS=Ar... 315 1e-99 sp|A1D405|RRP3_NEOFI ATP-dependent rRNA helicase rrp3 OS=Neosarto... 318 1e-99 sp|A1CH78|DED1_ASPCL ATP-dependent RNA helicase ded1 OS=Aspergill... 324 1e-99 sp|Q9CWX9|DDX47_MOUSE Probable ATP-dependent RNA helicase DDX47 O... 317 1e-99 sp|Q6FP38|DBP1_CANGA ATP-dependent RNA helicase DBP1 OS=Candida g... 322 2e-99 sp|P46942|DB10_NICSY ATP-dependent RNA helicase-like protein DB10... 322 2e-99 sp|A5DQS0|DED1_PICGU ATP-dependent RNA helicase DED1 OS=Meyerozym... 323 2e-99 sp|Q0CLJ6|DED1_ASPTN ATP-dependent RNA helicase ded1 OS=Aspergill... 324 3e-99 sp|Q6CH58|RRP3_YARLI ATP-dependent rRNA helicase RRP3 OS=Yarrowia... 317 3e-99 sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Aspergil... 317 3e-99 sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwal... 322 3e-99 sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffers... 322 4e-99 sp|Q4R6M5|DDX5_MACFA Probable ATP-dependent RNA helicase DDX5 OS=... 321 4e-99 sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomy... 323 4e-99 sp|Q5A9Z6|FAL1_CANAL ATP-dependent RNA helicase FAL1 OS=Candida a... 314 4e-99 sp|P0A4D8|CSHA_STRR6 DEAD-box ATP-dependent RNA helicase CshA OS=... 318 4e-99 sp|P0A4D7|CSHA_STRPN DEAD-box ATP-dependent RNA helicase CshA OS=... 318 4e-99 sp|A1CR32|RRP3_ASPCL ATP-dependent rRNA helicase rrp3 OS=Aspergil... 317 4e-99 sp|Q0UAT0|FAL1_PHANO ATP-dependent RNA helicase FAL1 OS=Phaeospha... 313 5e-99 sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidio... 316 6e-99 sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=Or... 326 7e-99 sp|A7TEF4|FAL1_VANPO ATP-dependent RNA helicase FAL1 OS=Vanderwal... 313 7e-99 sp|Q6FJG1|FAL1_CANGA ATP-dependent RNA helicase FAL1 OS=Candida g... 313 7e-99 sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=... 321 8e-99 sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptoco... 316 8e-99 sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptoco... 316 8e-99 sp|C8V8H4|DED1_EMENI ATP-dependent RNA helicase ded1 OS=Emericell... 322 9e-99 sp|Q2H1Q8|RRP3_CHAGB ATP-dependent rRNA helicase RRP3 OS=Chaetomi... 317 9e-99 sp|Q814I2|DBPA_BACCR ATP-dependent RNA helicase DbpA OS=Bacillus ... 316 1e-98 sp|Q81IT9|CSHA_BACCR DEAD-box ATP-dependent RNA helicase CshA OS=... 317 2e-98 sp|Q8H136|RH14_ARATH DEAD-box ATP-dependent RNA helicase 14 OS=Ar... 320 2e-98 sp|Q6HPE6|CSHA_BACHK DEAD-box ATP-dependent RNA helicase CshA OS=... 317 2e-98 sp|Q81VG0|CSHA_BACAN DEAD-box ATP-dependent RNA helicase CshA OS=... 317 2e-98 sp|A0R8U6|CSHA_BACAH DEAD-box ATP-dependent RNA helicase CshA OS=... 317 2e-98 sp|Q73EU1|CSHA_BACC1 DEAD-box ATP-dependent RNA helicase CshA OS=... 317 2e-98 sp|Q9VHP0|DDX3_DROME ATP-dependent RNA helicase bel OS=Drosophila... 324 2e-98 sp|Q63GX5|CSHA_BACCZ DEAD-box ATP-dependent RNA helicase CshA OS=... 317 2e-98 sp|Q65N62|CSHA_BACLD DEAD-box ATP-dependent RNA helicase CshA OS=... 315 3e-98 sp|O00571|DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sa... 320 3e-98 sp|Q81DF9|CSHE_BACCR DEAD-box ATP-dependent RNA helicase CshE OS=... 314 3e-98 sp|Q6CT85|RRP3_KLULA ATP-dependent rRNA helicase RRP3 OS=Kluyvero... 315 4e-98 sp|Q29S22|DDX47_BOVIN Probable ATP-dependent RNA helicase DDX47 O... 313 4e-98 sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 O... 313 4e-98 sp|Q8LA13|RH11_ARATH DEAD-box ATP-dependent RNA helicase 11 OS=Ar... 318 5e-98 sp|Q5A4E2|DED1_CANAL ATP-dependent RNA helicase DED1 OS=Candida a... 320 5e-98 sp|A5A6J2|DDX5_PANTR Probable ATP-dependent RNA helicase DDX5 OS=... 318 6e-98 sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomy... 314 6e-98 sp|P16381|DDX3L_MOUSE Putative ATP-dependent RNA helicase Pl10 OS... 319 8e-98 sp|A4RGD1|RRP3_PYRO7 ATP-dependent rRNA helicase RRP3 OS=Pyricula... 315 1e-97 sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosa... 313 1e-97 sp|Q62167|DDX3X_MOUSE ATP-dependent RNA helicase DDX3X OS=Mus mus... 319 1e-97 sp|Q5RF43|DDX3Y_PONAB ATP-dependent RNA helicase DDX3Y OS=Pongo a... 318 1e-97 sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergil... 313 1e-97 sp|O15523|DDX3Y_HUMAN ATP-dependent RNA helicase DDX3Y OS=Homo sa... 318 2e-97 sp|Q4P3U9|RRP3_USTMA ATP-dependent rRNA helicase RRP3 OS=Ustilago... 315 2e-97 sp|A2RB17|RRP3_ASPNC ATP-dependent rRNA helicase rrp3 OS=Aspergil... 312 2e-97 sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Or... 318 3e-97 sp|Q6GVM6|DDX3Y_PANTR ATP-dependent RNA helicase DDX3Y OS=Pan tro... 318 3e-97 sp|Q62095|DDX3Y_MOUSE ATP-dependent RNA helicase DDX3Y OS=Mus mus... 317 4e-97 sp|Q9M2F9|RH52_ARATH DEAD-box ATP-dependent RNA helicase 52 OS=Ar... 317 4e-97 sp|Q7RY59|RRP3_NEUCR ATP-dependent rRNA helicase rrp-3 OS=Neurosp... 313 4e-97 sp|Q6BQ61|RRP3_DEBHA ATP-dependent rRNA helicase RRP3 OS=Debaryom... 312 4e-97 sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida ... 312 5e-97 sp|A7TS37|RRP3_VANPO ATP-dependent rRNA helicase RRP3 OS=Vanderwa... 312 6e-97 sp|A6R3L3|DED1_AJECN ATP-dependent RNA helicase DED1 OS=Ajellomyc... 318 6e-97 sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=... 316 7e-97 sp|Q6BU54|DED1_DEBHA ATP-dependent RNA helicase DED1 OS=Debaryomy... 315 1e-96 sp|P25888|RHLE_ECOLI ATP-dependent RNA helicase RhlE OS=Escherich... 310 1e-96 sp|A6RW56|RRP3_BOTFB ATP-dependent rRNA helicase rrp3 OS=Botryoti... 310 1e-96 sp|Q9SQV1|RH40_ARATH DEAD-box ATP-dependent RNA helicase 40 OS=Ar... 325 2e-96 sp|O13370|DED1_SCHPO ATP-dependent RNA helicase ded1 OS=Schizosac... 315 2e-96 sp|Q75HJ0|RH37_ORYSJ DEAD-box ATP-dependent RNA helicase 37 OS=Or... 315 3e-96 sp|Q6BJX6|DHH1_DEBHA ATP-dependent RNA helicase DHH1 OS=Debaryomy... 310 3e-96 sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Ar... 314 4e-96 sp|Q0CIQ3|RRP3_ASPTN ATP-dependent rRNA helicase rrp3 OS=Aspergil... 308 5e-96 sp|Q0UU86|IF4A_PHANO ATP-dependent RNA helicase eIF4A OS=Phaeosph... 305 7e-96 sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharo... 309 1e-95 sp|A3LWX3|DHH1_PICST ATP-dependent RNA helicase DHH1 OS=Scheffers... 309 1e-95 sp|Q75EW9|RRP3_EREGS ATP-dependent rRNA helicase RRP3 OS=Eremothe... 308 1e-95 sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharo... 308 2e-95 sp|Q2YUH3|CSHA_STAAB DEAD-box ATP-dependent RNA helicase CshA OS=... 308 2e-95 sp|Q55804|CRHR_SYNY3 RNA helicase CrhR OS=Synechocystis sp. (stra... 307 2e-95 sp|A0A1D6LAB7|RH3B_MAIZE DEAD-box ATP-dependent RNA helicase 3B, ... 315 3e-95 sp|Q5ACU6|RRP3_CANAL ATP-dependent rRNA helicase RRP3 OS=Candida ... 308 3e-95 sp|A0A1D6GDY8|RH3A_MAIZE DEAD-box ATP-dependent RNA helicase 3A, ... 314 4e-95 sp|P9WH05|DEAD_MYCTU ATP-dependent RNA helicase DeaD OS=Mycobacte... 309 4e-95 sp|P9WH04|DEAD_MYCTO ATP-dependent RNA helicase DeaD OS=Mycobacte... 309 4e-95 sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3, chloro... 315 4e-95 sp|Q8SRB2|DBP2_ENCCU ATP-dependent RNA helicase DBP2 OS=Encephali... 307 6e-95 sp|Q7A0D2|CSHA_STAAW DEAD-box ATP-dependent RNA helicase CshA OS=... 307 6e-95 sp|Q6G7M9|CSHA_STAAS DEAD-box ATP-dependent RNA helicase CshA OS=... 307 6e-95 sp|Q7A4G0|CSHA_STAAN DEAD-box ATP-dependent RNA helicase CshA OS=... 307 6e-95 sp|Q99SH6|CSHA_STAAM DEAD-box ATP-dependent RNA helicase CshA OS=... 307 6e-95 sp|Q5HEB9|CSHA_STAAC DEAD-box ATP-dependent RNA helicase CshA OS=... 307 6e-95 sp|Q2FWH5|CSHA_STAA8 DEAD-box ATP-dependent RNA helicase CshA OS=... 307 6e-95 sp|Q2FF45|CSHA_STAA3 DEAD-box ATP-dependent RNA helicase CshA OS=... 307 6e-95 sp|Q9VIF6|DDX47_DROME ATP-dependent RNA helicase DDX47 OS=Drosoph... 307 7e-95 sp|Q8K9H6|DEAD_BUCAP ATP-dependent RNA helicase DeaD OS=Buchnera ... 310 8e-95 sp|Q6GEZ3|CSHA_STAAR DEAD-box ATP-dependent RNA helicase CshA OS=... 307 9e-95 sp|Q6CB69|DED1_YARLI ATP-dependent RNA helicase DED1 OS=Yarrowia ... 310 9e-95 sp|Q4IFI0|RRP3_GIBZE ATP-dependent rRNA helicase RRP3 OS=Gibberel... 305 1e-94 sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Or... 320 1e-94 sp|Q4WX43|IF4A_ASPFU ATP-dependent RNA helicase eIF4A OS=Aspergil... 302 2e-94 sp|Q49Z29|CSHA_STAS1 DEAD-box ATP-dependent RNA helicase CshA OS=... 305 2e-94 sp|P19109|DDX17_DROME ATP-dependent RNA helicase p62 OS=Drosophil... 312 2e-94 sp|Q7RV88|IF4A_NEUCR ATP-dependent RNA helicase eIF4A OS=Neurospo... 302 2e-94 sp|B4F1V3|RHLB_PROMH ATP-dependent RNA helicase RhlB OS=Proteus m... 303 2e-94 sp|A7EGL7|IF4A_SCLS1 ATP-dependent RNA helicase eIF4A OS=Scleroti... 302 3e-94 sp|Q088J2|RHLB_SHEFN ATP-dependent RNA helicase RhlB OS=Shewanell... 303 3e-94 sp|Q8Y7M8|DBPA_LISMO ATP-dependent RNA helicase DbpA OS=Listeria ... 304 3e-94 sp|Q2HFP1|IF4A_CHAGB ATP-dependent RNA helicase eIF4A OS=Chaetomi... 301 4e-94 sp|Q5B948|IF4A_EMENI ATP-dependent RNA helicase eIF4A OS=Emericel... 301 5e-94 sp|A1D7N3|IF4A_NEOFI ATP-dependent RNA helicase eIF4A OS=Neosarto... 301 5e-94 sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Ar... 303 5e-94 sp|A6RJ45|IF4A_BOTFB ATP-dependent RNA helicase eIF4A OS=Botryoti... 301 5e-94 sp|C3LQR1|RHLB_VIBCM ATP-dependent RNA helicase RhlB OS=Vibrio ch... 302 6e-94 sp|Q9KV52|RHLB_VIBCH ATP-dependent RNA helicase RhlB OS=Vibrio ch... 302 6e-94 sp|A5F3R4|RHLB_VIBC3 ATP-dependent RNA helicase RhlB OS=Vibrio ch... 302 6e-94 sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago ... 309 7e-94 sp|A4QVP2|IF4A_PYRO7 ATP-dependent RNA helicase eIF4A OS=Pyricula... 300 7e-94 sp|Q12S35|RHLB_SHEDO ATP-dependent RNA helicase RhlB OS=Shewanell... 302 7e-94 sp|Q1DQ20|IF4A_COCIM ATP-dependent RNA helicase eIF4A OS=Coccidio... 300 9e-94 sp|Q4L7W0|CSHA_STAHJ DEAD-box ATP-dependent RNA helicase CshA OS=... 304 9e-94 sp|P57453|DEAD_BUCAI ATP-dependent RNA helicase DeaD OS=Buchnera ... 307 1e-93 sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helica... 319 1e-93 sp|A3LS22|RRP3_PICST ATP-dependent rRNA helicase RRP3 OS=Scheffer... 303 1e-93 sp|Q6CZD9|RHLB_PECAS ATP-dependent RNA helicase RhlB OS=Pectobact... 301 1e-93 sp|A5DQF1|RRP3_PICGU ATP-dependent rRNA helicase RRP3 OS=Meyerozy... 302 1e-93 sp|Q88NB7|RHLB_PSEPK ATP-dependent RNA helicase RhlB OS=Pseudomon... 300 2e-93 sp|Q54CE0|DDX17_DICDI Probable ATP-dependent RNA helicase ddx17 O... 311 2e-93 sp|Q0CXD0|IF4A_ASPTN ATP-dependent RNA helicase eIF4A OS=Aspergil... 299 2e-93 sp|C6DHF5|RHLB_PECCP ATP-dependent RNA helicase RhlB OS=Pectobact... 300 2e-93 sp|A1CJT5|IF4A_ASPCL ATP-dependent RNA helicase eIF4A OS=Aspergil... 299 3e-93 sp|Q10202|DBP3_SCHPO ATP-dependent RNA helicase dbp3 OS=Schizosac... 305 3e-93 sp|Q0ILZ4|RH9_ORYSJ DEAD-box ATP-dependent RNA helicase 9 OS=Oryz... 306 3e-93 sp|Q4WT99|PRP5_ASPFU Pre-mRNA-processing ATP-dependent RNA helica... 318 3e-93 sp|B1KQF6|RHLB_SHEWM ATP-dependent RNA helicase RhlB OS=Shewanell... 300 3e-93 sp|Q755A5|DBP3_EREGS ATP-dependent RNA helicase DBP3 OS=Eremothec... 303 3e-93 sp|Q5AAW3|DHH1_CANAL ATP-dependent RNA helicase DHH1 OS=Candida a... 304 3e-93 sp|A5E1W4|DBP3_LODEL ATP-dependent RNA helicase DBP3 OS=Lodderomy... 303 4e-93 sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 O... 311 4e-93 sp|A9L5D5|RHLB_SHEB9 ATP-dependent RNA helicase RhlB OS=Shewanell... 300 4e-93 sp|A6WTD3|RHLB_SHEB8 ATP-dependent RNA helicase RhlB OS=Shewanell... 300 4e-93 sp|P33906|DEAD_KLEPN ATP-dependent RNA helicase DeaD OS=Klebsiell... 307 4e-93 sp|A1RFB3|RHLB_SHESW ATP-dependent RNA helicase RhlB OS=Shewanell... 300 4e-93 sp|A4YB09|RHLB_SHEPC ATP-dependent RNA helicase RhlB OS=Shewanell... 300 4e-93 sp|Q5HME0|CSHA_STAEQ DEAD-box ATP-dependent RNA helicase CshA OS=... 302 4e-93 sp|Q8CRP6|CSHA_STAES DEAD-box ATP-dependent RNA helicase CshA OS=... 302 5e-93 sp|A9MJ29|RHLB_SALAR ATP-dependent RNA helicase RhlB OS=Salmonell... 299 5e-93 sp|Q8JFP1|IF4A2_CHICK Eukaryotic initiation factor 4A-II OS=Gallu... 298 5e-93 sp|Q8EJQ5|RHLB_SHEON ATP-dependent RNA helicase RhlB OS=Shewanell... 300 5e-93 sp|Q0UK12|RRP3_PHANO ATP-dependent rRNA helicase RRP3 OS=Phaeosph... 303 6e-93 sp|A1D373|PRP5_NEOFI Pre-mRNA-processing ATP-dependent RNA helica... 317 6e-93 sp|Q1DHB2|PRP5_COCIM Pre-mRNA-processing ATP-dependent RNA helica... 317 6e-93 sp|P0A2P0|RHLB_SALTY ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|P0A2P1|RHLB_SALTI ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|B4TNT3|RHLB_SALSV ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|C0Q2V9|RHLB_SALPC ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|A9MXF3|RHLB_SALPB ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|B4SZ26|RHLB_SALNS ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|B4TB13|RHLB_SALHS ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|B5RFS3|RHLB_SALG2 ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|B5QVH2|RHLB_SALEP ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|Q57HT6|RHLB_SALCH ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|B5EZ40|RHLB_SALA4 ATP-dependent RNA helicase RhlB OS=Salmonell... 299 6e-93 sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helica... 317 6e-93 sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Ar... 308 7e-93 sp|Q0SYX0|RHLB_SHIF8 ATP-dependent RNA helicase RhlB OS=Shigella ... 298 7e-93 sp|A3D9I5|RHLB_SHEB5 ATP-dependent RNA helicase RhlB OS=Shewanell... 299 8e-93 sp|B8E670|RHLB_SHEB2 ATP-dependent RNA helicase RhlB OS=Shewanell... 299 8e-93 sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizos... 311 8e-93 sp|Q5RKI1|IF4A2_RAT Eukaryotic initiation factor 4A-II OS=Rattus ... 298 9e-93 sp|Q5R4X1|IF4A2_PONAB Eukaryotic initiation factor 4A-II OS=Pongo... 298 9e-93 sp|P10630|IF4A2_MOUSE Eukaryotic initiation factor 4A-II OS=Mus m... 298 9e-93 sp|Q14240|IF4A2_HUMAN Eukaryotic initiation factor 4A-II OS=Homo ... 298 9e-93 sp|Q3SZ65|IF4A2_BOVIN Eukaryotic initiation factor 4A-II OS=Bos t... 298 9e-93 sp|B2VG58|RHLB_ERWT9 ATP-dependent RNA helicase RhlB OS=Erwinia t... 299 9e-93 sp|P0A9P8|DEAD_SHIFL ATP-dependent RNA helicase DeaD OS=Shigella ... 305 1e-92 sp|P0A9P6|DEAD_ECOLI ATP-dependent RNA helicase DeaD OS=Escherich... 305 1e-92 sp|P0A9P7|DEAD_ECOL6 ATP-dependent RNA helicase DeaD OS=Escherich... 305 1e-92 sp|Q8XA87|DEAD_ECO57 ATP-dependent RNA helicase DeaD OS=Escherich... 305 1e-92 sp|Q4R4Y9|IF4A2_MACFA Eukaryotic initiation factor 4A-II OS=Macac... 298 1e-92 sp|Q6FW42|DRS1_CANGA ATP-dependent RNA helicase DRS1 OS=Candida g... 307 1e-92 sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozym... 307 1e-92 sp|B5BIS9|RHLB_SALPK ATP-dependent RNA helicase RhlB OS=Salmonell... 298 1e-92 sp|Q0HQL1|RHLB_SHESR ATP-dependent RNA helicase RhlB OS=Shewanell... 298 1e-92 sp|Q0HN76|RHLB_SHESM ATP-dependent RNA helicase RhlB OS=Shewanell... 298 1e-92 sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5 OS=Oryz... 301 1e-92 sp|B5FN74|RHLB_SALDC ATP-dependent RNA helicase RhlB OS=Salmonell... 298 2e-92 sp|A6VKC3|RHLB_ACTSZ ATP-dependent RNA helicase RhlB OS=Actinobac... 297 2e-92 sp|A6SCT6|DBP3_BOTFB ATP-dependent RNA helicase dbp3 OS=Botryotin... 303 2e-92 sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergi... 312 2e-92 sp|Q0D1K3|PRP5_ASPTN Pre-mRNA-processing ATP-dependent RNA helica... 316 2e-92 sp|Q9HXE5|RHLB_PSEAE ATP-dependent RNA helicase RhlB OS=Pseudomon... 297 2e-92 sp|Q02S21|RHLB_PSEAB ATP-dependent RNA helicase RhlB OS=Pseudomon... 297 2e-92 sp|B7UUT0|RHLB_PSEA8 ATP-dependent RNA helicase RhlB OS=Pseudomon... 297 2e-92 sp|Q87KH5|RHLB_VIBPA ATP-dependent RNA helicase RhlB OS=Vibrio pa... 298 2e-92 sp|O25029|RHPA_HELPY DEAD-box ATP-dependent RNA helicase RhpA OS=... 300 2e-92 sp|B7LU75|RHLB_ESCF3 ATP-dependent RNA helicase RhlB OS=Escherich... 297 2e-92 sp|P20447|DBP3_YEAST ATP-dependent RNA helicase DBP3 OS=Saccharom... 301 2e-92 sp|Q54QS3|DDX3_DICDI Probable ATP-dependent RNA helicase ddx3 OS=... 306 2e-92 sp|Q5RC67|DDX23_PONAB Probable ATP-dependent RNA helicase DDX23 O... 309 2e-92 sp|Q89AF9|DEAD_BUCBP ATP-dependent RNA helicase DeaD OS=Buchnera ... 303 2e-92 sp|P47943|IF4A_SCHPO ATP-dependent RNA helicase eIF4A OS=Schizosa... 296 2e-92 sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35 OS=Ar... 303 2e-92 sp|B7NTG2|RHLB_ECO7I ATP-dependent RNA helicase RhlB OS=Escherich... 297 2e-92 sp|B9XXL6|RHPA_HELP8 DEAD-box ATP-dependent RNA helicase RhpA OS=... 300 3e-92 sp|Q4P331|IF4A_USTMA ATP-dependent RNA helicase eIF4A OS=Ustilago... 297 3e-92 sp|Q3YVI4|RHLB_SHISS ATP-dependent RNA helicase RhlB OS=Shigella ... 297 3e-92 sp|P0A8K0|RHLB_SHIFL ATP-dependent RNA helicase RhlB OS=Shigella ... 297 3e-92 sp|Q1R4F9|RHLB_ECOUT ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B6I4B6|RHLB_ECOSE ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|P0A8J8|RHLB_ECOLI ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B1IWC0|RHLB_ECOLC ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|P0A8J9|RHLB_ECOL6 ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|Q0TAU3|RHLB_ECOL5 ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|A1AHV0|RHLB_ECOK1 ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|A8A6N4|RHLB_ECOHS ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B1X9Z4|RHLB_ECODH ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|C4ZZ48|RHLB_ECOBW ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B7M5C7|RHLB_ECO8A ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B7MR01|RHLB_ECO81 ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B7L8B6|RHLB_ECO55 ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B7MGJ1|RHLB_ECO45 ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B7UMN5|RHLB_ECO27 ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|A7ZTY2|RHLB_ECO24 ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B7NF85|RHLB_ECOLU ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|B1LLV3|RHLB_ECOSM ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|A3Q9R3|RHLB_SHELP ATP-dependent RNA helicase RhlB OS=Shewanell... 297 3e-92 sp|B5YY28|RHLB_ECO5E ATP-dependent RNA helicase RhlB OS=Escherich... 297 3e-92 sp|Q31UK5|RHLB_SHIBS ATP-dependent RNA helicase RhlB OS=Shigella ... 297 3e-92 sp|B2TU12|RHLB_SHIB3 ATP-dependent RNA helicase RhlB OS=Shigella ... 297 3e-92 sp|A4WG30|RHLB_ENT38 ATP-dependent RNA helicase RhlB OS=Enterobac... 297 3e-92 sp|A6ZUA1|DBP3_YEAS7 ATP-dependent RNA helicase DBP3 OS=Saccharom... 300 3e-92 sp|Q5BFU7|DBP10_EMENI ATP-dependent RNA helicase dbp10 OS=Emerice... 311 4e-92 sp|B5FF87|RHLB_ALIFM ATP-dependent RNA helicase RhlB OS=Aliivibri... 297 4e-92 sp|Q2UPY3|IF4A_ASPOR ATP-dependent RNA helicase eIF4A OS=Aspergil... 297 4e-92 sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helic... 312 4e-92 sp|Q9LUW6|RH9_ARATH DEAD-box ATP-dependent RNA helicase 9, mitoch... 303 4e-92 sp|A6TGG9|RHLB_KLEP7 ATP-dependent RNA helicase RhlB OS=Klebsiell... 297 4e-92 sp|Q2U2J6|PRP5_ASPOR Pre-mRNA-processing ATP-dependent RNA helica... 315 4e-92 sp|P29562|IF4A1_RABIT Eukaryotic initiation factor 4A-I (Fragment... 296 4e-92 sp|A7TJ36|DBP3_VANPO ATP-dependent RNA helicase DBP3 OS=Vanderwal... 300 4e-92 sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helica... 315 5e-92 sp|B5XYY9|RHLB_KLEP3 ATP-dependent RNA helicase RhlB OS=Klebsiell... 297 5e-92 sp|Q0CGJ9|SUB2_ASPTN ATP-dependent RNA helicase sub2 OS=Aspergill... 297 5e-92 sp|A8ACT3|RHLB_CITK8 ATP-dependent RNA helicase RhlB OS=Citrobact... 296 5e-92 sp|Q9Y7T7|PRP28_SCHPO Pre-mRNA-splicing ATP-dependent RNA helicas... 304 6e-92 sp|Q2UMH8|DBP3_ASPOR ATP-dependent RNA helicase dbp3 OS=Aspergill... 299 6e-92 sp|B8CHZ1|RHLB_SHEPW ATP-dependent RNA helicase RhlB OS=Shewanell... 297 6e-92 sp|Q7XMK8|RH6_ORYSJ DEAD-box ATP-dependent RNA helicase 6 OS=Oryz... 299 6e-92 sp|Q4R8K5|IF4A1_MACFA Eukaryotic initiation factor 4A-I OS=Macaca... 296 6e-92 sp|A4R715|DHH1_PYRO7 ATP-dependent RNA helicase DHH1 OS=Pyricular... 300 6e-92 sp|A8G0U0|RHLB_SHESH ATP-dependent RNA helicase RhlB OS=Shewanell... 297 6e-92 sp|A2QFL3|DBP3_ASPNC ATP-dependent RNA helicase dbp3 OS=Aspergill... 298 6e-92 sp|A8GZJ0|RHLB_SHEPA ATP-dependent RNA helicase RhlB OS=Shewanell... 297 6e-92 sp|B0TJ29|RHLB_SHEHH ATP-dependent RNA helicase RhlB OS=Shewanell... 297 7e-92 sp|A7MQI2|RHLB_CROS8 ATP-dependent RNA helicase RhlB OS=Cronobact... 296 7e-92 sp|P60843|IF4A1_MOUSE Eukaryotic initiation factor 4A-I OS=Mus mu... 295 7e-92 sp|P60842|IF4A1_HUMAN Eukaryotic initiation factor 4A-I OS=Homo s... 295 7e-92 sp|Q3SZ54|IF4A1_BOVIN Eukaryotic initiation factor 4A-I OS=Bos ta... 295 7e-92 sp|Q2NQB2|RHLB_SODGM ATP-dependent RNA helicase RhlB OS=Sodalis g... 296 7e-92 sp|A8G828|RHLB_SERP5 ATP-dependent RNA helicase RhlB OS=Serratia ... 296 7e-92 sp|Q8XAT4|RHLB_ECO57 ATP-dependent RNA helicase RhlB OS=Escherich... 296 7e-92 sp|Q329V8|RHLB_SHIDS ATP-dependent RNA helicase RhlB OS=Shigella ... 296 7e-92 sp|P09052|VASA1_DROME ATP-dependent RNA helicase vasa OS=Drosophi... 303 8e-92 sp|Q887N8|RHLB_PSESM ATP-dependent RNA helicase RhlB OS=Pseudomon... 295 9e-92 sp|Q5E8U5|RHLB_ALIF1 ATP-dependent RNA helicase RhlB OS=Aliivibri... 296 9e-92 sp|Q02748|IF4A_DROME Eukaryotic initiation factor 4A OS=Drosophil... 295 1e-91 sp|P44586|DEAD_HAEIN ATP-dependent RNA helicase DeaD OS=Haemophil... 302 1e-91 sp|Q0UY62|DBP3_PHANO ATP-dependent RNA helicase DBP3 OS=Phaeospha... 301 1e-91 sp|P0CQ70|IF4A_CRYNJ ATP-dependent RNA helicase eIF4A OS=Cryptoco... 295 1e-91 sp|P0CQ71|IF4A_CRYNB ATP-dependent RNA helicase eIF4A OS=Cryptoco... 295 1e-91 sp|A0KEG9|RHLB_AERHH ATP-dependent RNA helicase RhlB OS=Aeromonas... 295 1e-91 sp|Q75BS4|DHH1_EREGS ATP-dependent RNA helicase DHH1 OS=Eremothec... 297 1e-91 sp|P0CQ74|DED1_CRYNJ ATP-dependent RNA helicase ded1 OS=Cryptococ... 302 1e-91 sp|P0CQ75|DED1_CRYNB ATP-dependent RNA helicase ded1 OS=Cryptococ... 302 1e-91 sp|Q2GQ93|DHH1_CHAGB ATP-dependent RNA helicase DHH1 OS=Chaetomiu... 298 2e-91 sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Arab... 299 2e-91 sp|A1DL85|SUB2_NEOFI ATP-dependent RNA helicase sub2 OS=Neosartor... 295 2e-91 sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=Or... 300 2e-91 sp|A7MXT4|RHLB_VIBC1 ATP-dependent RNA helicase RhlB OS=Vibrio ca... 295 2e-91 sp|A0KS84|RHLB_SHESA ATP-dependent RNA helicase RhlB OS=Shewanell... 295 2e-91 sp|A1DG51|DBP3_NEOFI ATP-dependent RNA helicase dbp3 OS=Neosartor... 297 2e-91 sp|Q5R5F5|IF4A1_PONAB Eukaryotic initiation factor 4A-I OS=Pongo ... 294 3e-91 sp|Q2H0R2|DBP10_CHAGB ATP-dependent RNA helicase DBP10 OS=Chaetom... 305 3e-91 sp|Q0CL13|DBP3_ASPTN ATP-dependent RNA helicase dbp3 OS=Aspergill... 297 3e-91 sp|A6R3R5|IF4A_AJECN ATP-dependent RNA helicase eIF4A OS=Ajellomy... 293 4e-91 sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8 OS=Arab... 297 4e-91 sp|Q6FS54|DBP3_CANGA ATP-dependent RNA helicase DBP3 OS=Candida g... 298 4e-91 sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helica... 312 4e-91 sp|Q6CT46|DBP3_KLULA ATP-dependent RNA helicase DBP3 OS=Kluyverom... 297 4e-91 sp|Q109G2|RH12_ORYSJ DEAD-box ATP-dependent RNA helicase 12 OS=Or... 297 4e-91 sp|A1CMQ7|SUB2_ASPCL ATP-dependent RNA helicase sub2 OS=Aspergill... 295 4e-91 sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Or... 303 5e-91 sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Ar... 304 5e-91 sp|Q2U6P7|SUB2_ASPOR ATP-dependent RNA helicase sub2 OS=Aspergill... 294 6e-91 sp|A4STJ7|RHLB_AERS4 ATP-dependent RNA helicase RhlB OS=Aeromonas... 294 6e-91 sp|B7VME9|RHLB_VIBA3 ATP-dependent RNA helicase RhlB OS=Vibrio at... 294 6e-91 sp|Q7MYL2|RHLB_PHOLL ATP-dependent RNA helicase RhlB OS=Photorhab... 294 6e-91 sp|A5DS77|DBP2_LODEL ATP-dependent RNA helicase DBP2 OS=Lodderomy... 298 7e-91 sp|A5DB98|IF4A_PICGU ATP-dependent RNA helicase eIF4A OS=Meyerozy... 292 8e-91 sp|A2R0B5|SUB2_ASPNC ATP-dependent RNA helicase sub2 OS=Aspergill... 294 8e-91 sp|Q9LUW5|RH53_ARATH DEAD-box ATP-dependent RNA helicase 53, mito... 299 8e-91 sp|Q7Y183|RH10_ORYSJ DEAD-box ATP-dependent RNA helicase 10 OS=Or... 295 9e-91 sp|A2XKG2|RH10_ORYSI DEAD-box ATP-dependent RNA helicase 10 OS=Or... 295 9e-91 sp|Q7MGP7|RHLB_VIBVY ATP-dependent RNA helicase RhlB OS=Vibrio vu... 293 9e-91 sp|Q7SEL0|PRP28_NEUCR Pre-mRNA-splicing ATP-dependent RNA helicas... 302 9e-91 sp|P39517|DHH1_YEAST ATP-dependent RNA helicase DHH1 OS=Saccharom... 296 9e-91 sp|A6ZXG9|DHH1_YEAS7 ATP-dependent RNA helicase DHH1 OS=Saccharom... 296 9e-91 sp|A7TGU7|DHH1_VANPO ATP-dependent RNA helicase DHH1 OS=Vanderwal... 295 1e-90 sp|Q4HW67|DHH1_GIBZE ATP-dependent RNA helicase DHH1 OS=Gibberell... 295 1e-90 sp|P32892|DRS1_YEAST ATP-dependent RNA helicase DRS1 OS=Saccharom... 303 1e-90 sp|Q4WCW2|SUB2_ASPFU ATP-dependent RNA helicase sub2 OS=Aspergill... 294 1e-90 sp|A7A0P8|DRS1_YEAS7 ATP-dependent RNA helicase DRS1 OS=Saccharom... 303 1e-90 sp|A5A6N4|IF4A1_PANTR Eukaryotic initiation factor 4A-I OS=Pan tr... 292 1e-90 sp|A1C5V3|DBP3_ASPCL ATP-dependent RNA helicase dbp3 OS=Aspergill... 295 1e-90 sp|Q6LLL5|RHLB_PHOPR ATP-dependent RNA helicase RhlB OS=Photobact... 293 1e-90 sp|Q8DDN6|RHLB_VIBVU ATP-dependent RNA helicase RhlB OS=Vibrio vu... 293 1e-90 sp|B1JQ11|RHLB_YERPY ATP-dependent RNA helicase RhlB OS=Yersinia ... 293 1e-90 sp|Q66G19|RHLB_YERPS ATP-dependent RNA helicase RhlB OS=Yersinia ... 293 1e-90 sp|A4TRC8|RHLB_YERPP ATP-dependent RNA helicase RhlB OS=Yersinia ... 293 1e-90 sp|Q1CNK3|RHLB_YERPN ATP-dependent RNA helicase RhlB OS=Yersinia ... 293 1e-90 sp|Q8ZAD8|RHLB_YERPE ATP-dependent RNA helicase RhlB OS=Yersinia ... 293 1e-90 sp|B2K046|RHLB_YERPB ATP-dependent RNA helicase RhlB OS=Yersinia ... 293 1e-90 sp|Q1CBQ4|RHLB_YERPA ATP-dependent RNA helicase RhlB OS=Yersinia ... 293 1e-90 sp|A7FD47|RHLB_YERP3 ATP-dependent RNA helicase RhlB OS=Yersinia ... 293 1e-90 sp|Q1EB38|DBP10_COCIM ATP-dependent RNA helicase DBP10 OS=Coccidi... 307 1e-90 sp|A4RK80|PRP28_PYRO7 Pre-mRNA-splicing ATP-dependent RNA helicas... 300 1e-90 sp|A7EIX7|SUB2_SCLS1 ATP-dependent RNA helicase sub2 OS=Sclerotin... 293 2e-90 sp|A2QEN5|IF4A_ASPNC ATP-dependent RNA helicase eIF4A OS=Aspergil... 292 2e-90 sp|Q58083|H669_METJA Probable ATP-dependent RNA helicase MJ0669 O... 290 2e-90 sp|Q2H4D0|SUB2_CHAGB ATP-dependent RNA helicase SUB2 OS=Chaetomiu... 293 2e-90 sp|A1CTZ6|DBP10_ASPCL ATP-dependent RNA helicase dbp10 OS=Aspergi... 306 2e-90 sp|Q1DI07|SUB2_COCIM ATP-dependent RNA helicase SUB2 OS=Coccidioi... 293 2e-90 sp|A1SAL1|RHLB_SHEAM ATP-dependent RNA helicase RhlB OS=Shewanell... 293 2e-90 sp|A7EYW0|DBP3_SCLS1 ATP-dependent RNA helicase dbp3 OS=Sclerotin... 298 2e-90 sp|Q6C9P3|DBP3_YARLI ATP-dependent RNA helicase DBP3 OS=Yarrowia ... 295 3e-90 sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helica... 310 3e-90 sp|P21693|DBPA_ECOLI ATP-dependent RNA helicase DbpA OS=Escherich... 293 3e-90 sp|Q54VT4|DDX47_DICDI Probable ATP-dependent RNA helicase ddx47 O... 296 3e-90 sp|Q9M2E0|RH12_ARATH DEAD-box ATP-dependent RNA helicase 12 OS=Ar... 294 4e-90 sp|Q94BV4|RH6_ARATH DEAD-box ATP-dependent RNA helicase 6 OS=Arab... 295 4e-90 sp|Q6H7S2|RH8_ORYSJ DEAD-box ATP-dependent RNA helicase 8 OS=Oryz... 294 4e-90 sp|Q1E5R1|DHH1_COCIM ATP-dependent RNA helicase DHH1 OS=Coccidioi... 294 4e-90 sp|Q6BTL5|DRS1_DEBHA ATP-dependent RNA helicase DRS1 OS=Debaryomy... 302 5e-90 sp|Q4WH83|DBP3_ASPFU ATP-dependent RNA helicase dbp3 OS=Aspergill... 294 5e-90 sp|Q26696|DDX17_TRYBB Putative DEAD-box RNA helicase HEL64 OS=Try... 296 5e-90 sp|Q0CMM8|DBP10_ASPTN ATP-dependent RNA helicase dbp10 OS=Aspergi... 305 5e-90 sp|C4LB49|RHLB_TOLAT ATP-dependent RNA helicase RhlB OS=Tolumonas... 291 5e-90 sp|A3LQW7|DBP2_PICST ATP-dependent RNA helicase DBP2 OS=Scheffers... 295 6e-90 sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase... 295 6e-90 sp|Q6CSZ7|DHH1_KLULA ATP-dependent RNA helicase DHH1 OS=Kluyverom... 294 7e-90 sp|A1CJ18|DHH1_ASPCL ATP-dependent RNA helicase dhh1 OS=Aspergill... 293 7e-90 sp|Q6BRN4|IF4A_DEBHA ATP-dependent RNA helicase eIF4A OS=Debaryom... 290 7e-90 sp|A2QY39|DHH1_ASPNC ATP-dependent RNA helicase dhh1 OS=Aspergill... 293 8e-90 sp|P0CQ79|DBP3_CRYNB ATP-dependent RNA helicase DBP3 OS=Cryptococ... 297 8e-90 sp|Q9NXZ2|DDX43_HUMAN Probable ATP-dependent RNA helicase DDX43 O... 298 8e-90 sp|Q7S9J4|DBP10_NEUCR ATP-dependent RNA helicase dbp-10 OS=Neuros... 305 8e-90 sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=... 297 9e-90 sp|Q5AWA6|DBP3_EMENI ATP-dependent RNA helicase dbp3 OS=Emericell... 293 9e-90 sp|B6EPA4|RHLB_ALISL ATP-dependent RNA helicase RhlB OS=Aliivibri... 291 9e-90 sp|Q0JM17|RH56_ORYSJ DEAD-box ATP-dependent RNA helicase 56 OS=Or... 291 1e-89 sp|Q0CBE1|DHH1_ASPTN ATP-dependent RNA helicase dhh1 OS=Aspergill... 293 1e-89 sp|P0CQ78|DBP3_CRYNJ ATP-dependent RNA helicase DBP3 OS=Cryptococ... 296 1e-89 sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosac... 300 1e-89 sp|A7ENE0|PRP5_SCLS1 Pre-mRNA-processing ATP-dependent RNA helica... 307 1e-89 sp|Q95YF3|CGH1_CAEEL ATP-dependent RNA helicase cgh-1 OS=Caenorha... 290 1e-89 sp|Q5JK84|RH15_ORYSJ DEAD-box ATP-dependent RNA helicase 15 OS=Or... 290 1e-89 sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergi... 304 1e-89 sp|P87206|IF4A_CANAL ATP-dependent RNA helicase eIF4A OS=Candida ... 289 1e-89 sp|A1D8G1|DHH1_NEOFI ATP-dependent RNA helicase dhh1 OS=Neosartor... 293 2e-89 sp|A1CX72|PRP28_NEOFI Pre-mRNA-splicing ATP-dependent RNA helicas... 301 2e-89 sp|A5UI36|RHLB_HAEIG ATP-dependent RNA helicase RhlB OS=Haemophil... 289 2e-89 sp|Q6FQU5|DHH1_CANGA ATP-dependent RNA helicase DHH1 OS=Candida g... 292 2e-89 sp|Q4WWD3|DHH1_ASPFU ATP-dependent RNA helicase dhh1 OS=Aspergill... 292 2e-89 sp|Q54E49|DDX6_DICDI Probable ATP-dependent RNA helicase ddx6 OS=... 290 2e-89 sp|Q8NJM2|DBP10_ASPFU ATP-dependent RNA helicase dbp10 OS=Aspergi... 302 2e-89 sp|C4K8M8|RHLB_HAMD5 ATP-dependent RNA helicase RhlB OS=Hamiltone... 290 2e-89 sp|Q4WPE9|PRP28_ASPFU Pre-mRNA-splicing ATP-dependent RNA helicas... 300 3e-89 sp|A4R5B8|DBP10_PYRO7 ATP-dependent RNA helicase DBP10 OS=Pyricul... 303 3e-89 sp|A6QXC1|DBP3_AJECN ATP-dependent RNA helicase DBP3 OS=Ajellomyc... 292 3e-89 sp|Q1DMX8|PRP28_COCIM Pre-mRNA-splicing ATP-dependent RNA helicas... 301 3e-89 sp|A1DNG2|DBP10_NEOFI ATP-dependent RNA helicase dbp10 OS=Neosart... 303 3e-89 sp|Q5APT8|DBP3_CANAL ATP-dependent RNA helicase DBP3 OS=Candida a... 294 3e-89 sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellom... 302 3e-89 sp|Q0U7S9|DHH1_PHANO ATP-dependent RNA helicase DHH1 OS=Phaeospha... 292 3e-89 sp|Q55BR9|DDX49_DICDI Probable ATP-dependent RNA helicase ddx49 O... 292 4e-89 sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 O... 295 4e-89 sp|Q4HZ42|DBP10_GIBZE ATP-dependent RNA helicase DBP10 OS=Gibbere... 302 4e-89 sp|A5DVM3|IF4A_LODEL ATP-dependent RNA helicase eIF4A OS=Lodderom... 288 4e-89 sp|Q2U5A2|DHH1_ASPOR ATP-dependent RNA helicase dhh1 OS=Aspergill... 292 4e-89 sp|A5DDN0|SUB2_PICGU ATP-dependent RNA helicase SUB2 OS=Meyerozym... 289 4e-89 sp|Q2HEB0|PRP28_CHAGB Pre-mRNA-splicing ATP-dependent RNA helicas... 297 4e-89 sp|A3LST5|SUB2_PICST ATP-dependent RNA helicase SUB2 OS=Scheffers... 289 4e-89 sp|A4RBS3|SUB2_PYRO7 ATP-dependent RNA helicase SUB2 OS=Pyricular... 289 5e-89 sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Ar... 306 6e-89 sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 O... 295 6e-89 sp|Q6BME5|SUB2_DEBHA ATP-dependent RNA helicase SUB2 OS=Debaryomy... 289 7e-89 sp|A6RW79|PRP5_BOTFB Pre-mRNA-processing ATP-dependent RNA helica... 305 8e-89 sp|A6RY31|DHH1_BOTFB ATP-dependent RNA helicase dhh1 OS=Botryotin... 292 8e-89 sp|Q5QYF8|RHLB_IDILO ATP-dependent RNA helicase RhlB OS=Idiomarin... 288 8e-89 sp|Q4IJH1|DBP3_GIBZE ATP-dependent RNA helicase DBP3 OS=Gibberell... 293 8e-89 sp|Q9LFN6|RH56_ARATH DEAD-box ATP-dependent RNA helicase 56 OS=Ar... 288 9e-89 sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15 OS=Ar... 288 9e-89 sp|A1CYG5|DBP5_NEOFI ATP-dependent RNA helicase dbp5 OS=Neosartor... 290 9e-89 sp|A6R603|SUB2_AJECN ATP-dependent RNA helicase SUB2 OS=Ajellomyc... 288 9e-89 sp|A3GFI4|IF4A_PICST ATP-dependent RNA helicase eIF4A OS=Scheffer... 287 9e-89 sp|Q54KG1|DDX41_DICDI Probable ATP-dependent RNA helicase ddx41 O... 295 1e-88 sp|Q5Z6G5|RH35B_ORYSJ DEAD-box ATP-dependent RNA helicase 35B OS=... 294 1e-88 sp|A4QYM6|DRS1_PYRO7 ATP-dependent RNA helicase DRS1 OS=Pyricular... 298 1e-88 sp|Q8L7S8|RH3_ARATH DEAD-box ATP-dependent RNA helicase 3, chloro... 297 2e-88 sp|Q5ADL0|PRP5_CANAL Pre-mRNA-processing ATP-dependent RNA helica... 300 2e-88 sp|A5E3W5|SUB2_LODEL ATP-dependent RNA helicase SUB2 OS=Lodderomy... 288 2e-88 sp|Q9NQI0|DDX4_HUMAN Probable ATP-dependent RNA helicase DDX4 OS=... 296 2e-88 sp|Q7S5D9|DHH1_NEUCR ATP-dependent RNA helicase dhh1 OS=Neurospor... 292 2e-88 sp|A1SZG4|RHLB_PSYIN ATP-dependent RNA helicase RhlB OS=Psychromo... 287 2e-88 sp|A3LRW2|DBP3_PICST ATP-dependent RNA helicase DBP3 OS=Scheffers... 290 2e-88 sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helica... 303 2e-88 sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helica... 303 2e-88 sp|Q4P9P3|DRS1_USTMA ATP-dependent RNA helicase DRS1 OS=Ustilago ... 300 2e-88 sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Or... 297 3e-88 sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helica... 304 3e-88 sp|O13792|SUB2_SCHPO ATP-dependent RNA helicase uap56 OS=Schizosa... 287 3e-88 sp|A6RJA2|PRP28_BOTFB Pre-mRNA-splicing ATP-dependent RNA helicas... 297 3e-88 sp|Q2UH00|PRP28_ASPOR Pre-mRNA-splicing ATP-dependent RNA helicas... 297 3e-88 sp|Q4WIN6|DBP5_ASPFU ATP-dependent RNA helicase dbp5 OS=Aspergill... 288 3e-88 sp|Q64060|DDX4_RAT Probable ATP-dependent RNA helicase DDX4 OS=Ra... 295 3e-88 sp|Q75BL8|IF4A_EREGS ATP-dependent RNA helicase eIF4A OS=Eremothe... 285 4e-88 sp|A5UDI1|RHLB_HAEIE ATP-dependent RNA helicase RhlB OS=Haemophil... 286 4e-88 sp|Q61496|DDX4_MOUSE ATP-dependent RNA helicase DDX4 OS=Mus muscu... 295 5e-88 sp|Q4I7F9|PRP28_GIBZE Pre-mRNA-splicing ATP-dependent RNA helicas... 295 5e-88 sp|A4RN46|PRP5_PYRO7 Pre-mRNA-processing ATP-dependent RNA helica... 301 5e-88 sp|Q3MSQ8|DDX4_PELLE Probable ATP-dependent RNA helicase DDX4 OS=... 295 6e-88 sp|Q6CDV4|IF4A_YARLI ATP-dependent RNA helicase eIF4A OS=Yarrowia... 285 6e-88 sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helica... 302 6e-88 sp|Q5BCU6|PRP28_EMENI Pre-mRNA-splicing ATP-dependent RNA helicas... 296 7e-88 sp|A7EGG4|PRP28_SCLS1 Pre-mRNA-splicing ATP-dependent RNA helicas... 297 8e-88 sp|P0CQ80|DHH1_CRYNJ ATP-dependent RNA helicase DHH1 OS=Cryptococ... 292 8e-88 sp|P0CQ81|DHH1_CRYNB ATP-dependent RNA helicase DHH1 OS=Cryptococ... 292 8e-88 sp|Q4R5S7|DDX4_MACFA Probable ATP-dependent RNA helicase DDX4 OS=... 294 8e-88 sp|Q7ZY47|DDX42_XENLA ATP-dependent RNA helicase DDX42 OS=Xenopus... 299 9e-88 sp|Q6CH90|SUB2_YARLI ATP-dependent RNA helicase SUB2 OS=Yarrowia ... 286 9e-88 sp|A1CHL3|PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helicas... 296 1e-87 sp|Q5W5U4|DDX4_BOVIN Probable ATP-dependent RNA helicase DDX4 OS=... 294 1e-87 sp|Q5WR10|DX39B_CANLF Spliceosome RNA helicase DDX39B OS=Canis lu... 285 1e-87 sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=... 300 1e-87 sp|Q5RE47|DX39B_PONAB Spliceosome RNA helicase DDX39B OS=Pongo ab... 285 1e-87 sp|Q29024|DX39B_PIG Spliceosome RNA helicase DDX39B OS=Sus scrofa... 285 1e-87 sp|P60024|DX39B_PANTR Spliceosome RNA helicase DDX39B OS=Pan trog... 285 1e-87 sp|Q5TM17|DX39B_MACMU Spliceosome RNA helicase DDX39B OS=Macaca m... 285 1e-87 sp|Q13838|DX39B_HUMAN Spliceosome RNA helicase DDX39B OS=Homo sap... 285 1e-87 sp|Q58Z64|DHH1_CRYNH ATP-dependent RNA helicase VAD1 OS=Cryptococ... 291 1e-87 sp|Q6C024|PRP28_YARLI Pre-mRNA-splicing ATP-dependent RNA helicas... 290 1e-87 sp|Q810A7|DDX42_MOUSE ATP-dependent RNA helicase DDX42 OS=Mus mus... 298 1e-87 sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 O... 300 1e-87 sp|O00148|DX39A_HUMAN ATP-dependent RNA helicase DDX39A OS=Homo s... 285 1e-87 sp|Q0UWC8|PRP28_PHANO Pre-mRNA-splicing ATP-dependent RNA helicas... 294 1e-87 sp|Q63413|DX39B_RAT Spliceosome RNA helicase Ddx39b OS=Rattus nor... 285 1e-87 sp|Q9Z1N5|DX39B_MOUSE Spliceosome RNA helicase Ddx39b OS=Mus musc... 285 1e-87 sp|Q6BZ77|DBP3_DEBHA ATP-dependent RNA helicase DBP3 OS=Debaryomy... 288 2e-87 sp|A7TJM9|DRS1_VANPO ATP-dependent RNA helicase DRS1 OS=Vanderwal... 294 2e-87 sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 O... 300 2e-87 sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 O... 300 2e-87 sp|Q9CJS1|RHLB_PASMU ATP-dependent RNA helicase RhlB OS=Pasteurel... 285 2e-87 sp|A7TGW7|DBP10_VANPO ATP-dependent RNA helicase DBP10 OS=Vanderw... 299 2e-87 sp|Q75F95|DRS1_EREGS ATP-dependent RNA helicase DRS1 OS=Eremothec... 294 2e-87 sp|Q3T147|DX39B_BOVIN Spliceosome RNA helicase DDX39B OS=Bos taur... 285 2e-87 sp|Q86XP3|DDX42_HUMAN ATP-dependent RNA helicase DDX42 OS=Homo sa... 298 2e-87 sp|D0PV95|DDX3_CAEEL ATP-dependent RNA helicase laf-1 OS=Caenorha... 293 2e-87 sp|Q6CXT4|IF4A_KLULA ATP-dependent RNA helicase eIF4A OS=Kluyvero... 283 3e-87 sp|A7ESL7|DBP10_SCLS1 ATP-dependent RNA helicase dbp10 OS=Sclerot... 297 3e-87 sp|Q6GWX0|DDX4_PIG Probable ATP-dependent RNA helicase DDX4 OS=Su... 293 4e-87 sp|Q879Y6|RHLB_XYLFT ATP-dependent RNA helicase RhlB OS=Xylella f... 288 4e-87 sp|Q6C0X2|DHH1_YARLI ATP-dependent RNA helicase DHH1 OS=Yarrowia ... 287 4e-87 sp|Q0TXZ2|SUB2_PHANO ATP-dependent RNA helicase SUB2 OS=Phaeospha... 284 5e-87 sp|Q6C7X8|DBP10_YARLI ATP-dependent RNA helicase DBP10 OS=Yarrowi... 297 5e-87 sp|Q757U8|DBP10_EREGS ATP-dependent RNA helicase DBP10 OS=Eremoth... 297 5e-87 sp|Q09181|DHH1_SCHPO Putative ATP-dependent RNA helicase ste13 OS... 285 5e-87 sp|Q5F485|DDX42_CHICK ATP-dependent RNA helicase DDX42 OS=Gallus ... 297 5e-87 sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 O... 298 6e-87 sp|P23128|DDX6_DROME ATP-dependent RNA helicase me31b OS=Drosophi... 284 7e-87 sp|Q7S5R1|DBP3_NEUCR ATP-dependent RNA helicase dbp-3 OS=Neurospo... 289 7e-87 sp|A6SFV4|DBP8_BOTFB ATP-dependent RNA helicase dbp8 OS=Botryotin... 287 8e-87 sp|Q0CLX0|PRP28_ASPTN Pre-mRNA-splicing ATP-dependent RNA helicas... 293 8e-87 sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 O... 293 8e-87 sp|A2QIL2|PRP28_ASPNC Pre-mRNA-splicing ATP-dependent RNA helicas... 293 9e-87 sp|Q553B1|DDX46_DICDI ATP-dependent RNA helicase ddx46 OS=Dictyos... 300 9e-87 sp|Q6CT49|PRP28_KLULA Pre-mRNA-splicing ATP-dependent RNA helicas... 287 9e-87 sp|Q40466|IF413_TOBAC Eukaryotic initiation factor 4A-13 (Fragmen... 280 9e-87 sp|Q5R7D1|DDX42_PONAB ATP-dependent RNA helicase DDX42 OS=Pongo a... 296 1e-86 sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Scheffers... 292 1e-86 sp|Q0IHV9|DDX6_XENTR Probable ATP-dependent RNA helicase ddx6 OS=... 284 1e-86 sp|Q5ZHZ0|DX39B_CHICK Spliceosome RNA helicase DDX39B OS=Gallus g... 282 1e-86 sp|Q8VDW0|DX39A_MOUSE ATP-dependent RNA helicase DDX39A OS=Mus mu... 282 1e-86 sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicas... 287 1e-86 sp|Q1DZK8|DBP3_COCIM ATP-dependent RNA helicase DBP3 OS=Coccidioi... 285 2e-86 sp|P54824|DDX6_XENLA ATP-dependent RNA helicase ddx6 OS=Xenopus l... 284 2e-86 sp|Q5U216|DX39A_RAT ATP-dependent RNA helicase DDX39A OS=Rattus n... 282 2e-86 sp|Q5ASK8|SUB2_EMENI ATP-dependent RNA helicase sub2 OS=Emericell... 282 2e-86 sp|A3LZT3|DBP10_PICST ATP-dependent RNA helicase DBP10 OS=Scheffe... 295 3e-86 sp|Q4JG17|VASAL_PENVA Probable ATP-dependent RNA helicase vasa-li... 290 3e-86 sp|Q759L6|SUB2_EREGS ATP-dependent RNA helicase SUB2 OS=Eremothec... 282 3e-86 sp|A5E0U9|DBP8_LODEL ATP-dependent RNA helicase DBP8 OS=Lodderomy... 282 3e-86 sp|A5DU73|PRP28_LODEL Pre-mRNA-splicing ATP-dependent RNA helicas... 287 4e-86 sp|P54823|DDX6_MOUSE Probable ATP-dependent RNA helicase DDX6 OS=... 283 4e-86 sp|Q6FQQ6|IF4A_CANGA ATP-dependent RNA helicase eIF4A OS=Candida ... 280 5e-86 sp|Q59PR3|DBP8_CANAL ATP-dependent RNA helicase DBP8 OS=Candida a... 282 5e-86 sp|Q91372|DDX4_XENLA Probable ATP-dependent RNA helicase DDX4 OS=... 289 5e-86 sp|P0C2N8|DRS1_NEUCR ATP-dependent RNA helicase drs1 OS=Neurospor... 292 5e-86 sp|A1CFV3|DBP5_ASPCL ATP-dependent RNA helicase dbp5 OS=Aspergill... 283 6e-86 sp|Q6FNA2|DBP10_CANGA ATP-dependent RNA helicase DBP10 OS=Candida... 295 6e-86 sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Meyeroz... 293 7e-86 sp|A5DAC8|DBP3_PICGU ATP-dependent RNA helicase DBP3 OS=Meyerozym... 284 7e-86 sp|Q6CM95|SUB2_KLULA ATP-dependent RNA helicase SUB2 OS=Kluyverom... 281 8e-86 sp|Q0I1X0|RHLB_HISS1 ATP-dependent RNA helicase RhlB OS=Histophil... 280 8e-86 sp|B0UUZ9|RHLB_HISS2 ATP-dependent RNA helicase RhlB OS=Histophil... 280 8e-86 sp|P26196|DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 OS=... 282 8e-86 sp|Q2GUI4|DBP3_CHAGB ATP-dependent RNA helicase DBP3 OS=Chaetomiu... 285 9e-86 sp|A1D6X9|DBP8_NEOFI ATP-dependent RNA helicase dbp8 OS=Neosartor... 283 1e-85 sp|A5DBI5|DBP5_PICGU ATP-dependent RNA helicase DBP5 OS=Meyerozym... 282 1e-85 sp|Q4WRV2|DRS1_ASPFU ATP-dependent RNA helicase drs1 OS=Aspergill... 291 1e-85 sp|Q6CCZ1|PRP5_YARLI Pre-mRNA-processing ATP-dependent RNA helica... 294 1e-85 sp|Q6CIR0|DBP10_KLULA ATP-dependent RNA helicase DBP10 OS=Kluyver... 294 1e-85 sp|Q6FM43|PRP28_CANGA Pre-mRNA-splicing ATP-dependent RNA helicas... 285 1e-85 sp|A5DF03|PRP28_PICGU Pre-mRNA-splicing ATP-dependent RNA helicas... 285 1e-85 sp|Q8P4D4|RHLB_XANCP ATP-dependent RNA helicase RhlB OS=Xanthomon... 284 1e-85 sp|B0RWT6|RHLB_XANCB ATP-dependent RNA helicase RhlB OS=Xanthomon... 284 1e-85 sp|Q4UPY5|RHLB_XANC8 ATP-dependent RNA helicase RhlB OS=Xanthomon... 284 1e-85 sp|Q5ZKB9|DDX6_CHICK Probable ATP-dependent RNA helicase DDX6 OS=... 282 1e-85 sp|Q9WTM2|DDX6_CAVPO Probable ATP-dependent RNA helicase DDX6 (Fr... 281 1e-85 sp|Q54Y81|DDX23_DICDI ATP-dependent RNA helicase ddx23 OS=Dictyos... 291 2e-85 sp|Q3BNH8|RHLB_XANC5 ATP-dependent RNA helicase RhlB OS=Xanthomon... 284 2e-85 sp|Q8PFZ3|RHLB_XANAC ATP-dependent RNA helicase RhlB OS=Xanthomon... 284 2e-85 sp|Q5GUR8|RHLB_XANOR ATP-dependent RNA helicase RhlB OS=Xanthomon... 284 2e-85 sp|P23394|PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicas... 284 2e-85 sp|Q5ANB2|DBP10_CANAL ATP-dependent RNA helicase DBP10 OS=Candida... 292 2e-85 sp|A7TK55|IF4A_VANPO ATP-dependent RNA helicase eIF4A OS=Vanderwa... 278 2e-85 sp|Q25225|IF4A_LEIBR Probable eukaryotic initiation factor 4A OS=... 278 2e-85 sp|A5AA68|DBP8_ASPNC ATP-dependent RNA helicase dbp8 OS=Aspergill... 282 3e-85 sp|P10081|IF4A_YEAST ATP-dependent RNA helicase eIF4A OS=Saccharo... 278 3e-85 sp|A6ZQJ1|IF4A_YEAS7 ATP-dependent RNA helicase eIF4A OS=Saccharo... 278 3e-85 sp|Q9PA24|RHLB_XYLFA ATP-dependent RNA helicase RhlB OS=Xylella f... 283 3e-85 sp|O62591|IF4A_LEIMA Probable eukaryotic initiation factor 4A OS=... 278 3e-85 sp|A4HRK0|IF4A_LEIIN Probable eukaryotic initiation factor 4A OS=... 278 3e-85 sp|Q9HGM5|DBP8_SCHPO ATP-dependent RNA helicase dbp8 OS=Schizosac... 280 3e-85 sp|A5DLE0|DBP8_PICGU ATP-dependent RNA helicase DBP8 OS=Meyerozym... 279 3e-85 sp|P20449|DBP5_YEAST ATP-dependent RNA helicase DBP5 OS=Saccharom... 280 3e-85 sp|A6ZNQ1|DBP5_YEAS7 ATP-dependent RNA helicase DBP5 OS=Saccharom... 280 3e-85 sp|Q9V3C0|DDX41_DROME ATP-dependent RNA helicase abstrakt OS=Dros... 285 4e-85 sp|Q4WXW1|DBP8_ASPFU ATP-dependent RNA helicase dbp8 OS=Aspergill... 282 4e-85 sp|Q4I662|DBP8_GIBZE ATP-dependent RNA helicase DBP8 OS=Gibberell... 282 4e-85 sp|Q6FQZ0|DBP8_CANGA ATP-dependent RNA helicase DBP8 OS=Candida g... 279 4e-85 sp|A6ZXP4|SUB2_YEAS7 ATP-dependent RNA helicase SUB2 OS=Saccharom... 279 4e-85 sp|Q6C799|DBP8_YARLI ATP-dependent RNA helicase DBP8 OS=Yarrowia ... 279 5e-85 sp|P44922|RHLB_HAEIN ATP-dependent RNA helicase RhlB OS=Haemophil... 278 5e-85 sp|Q07478|SUB2_YEAST ATP-dependent RNA helicase SUB2 OS=Saccharom... 279 5e-85 sp|Q6BGU8|DBP8_DEBHA ATP-dependent RNA helicase DBP8 OS=Debaryomy... 278 6e-85 sp|O01836|GLH3_CAEEL ATP-dependent RNA helicase glh-3 OS=Caenorha... 287 6e-85 sp|Q54IV3|DDX42_DICDI Probable ATP-dependent RNA helicase ddx42 O... 292 7e-85 sp|Q12389|DBP10_YEAST ATP-dependent RNA helicase DBP10 OS=Sacchar... 292 7e-85 sp|A7TK63|DBP8_VANPO ATP-dependent RNA helicase DBP8 OS=Vanderwal... 278 8e-85 sp|Q0U8V9|DBP8_PHANO ATP-dependent RNA helicase DBP8 OS=Phaeospha... 280 8e-85 sp|A7E436|DBP8_SCLS1 ATP-dependent RNA helicase dbp8 OS=Sclerotin... 281 8e-85 sp|P0CQ96|SUB2_CRYNJ ATP-dependent RNA helicase SUB2 OS=Cryptococ... 278 8e-85 sp|P0CQ97|SUB2_CRYNB ATP-dependent RNA helicase SUB2 OS=Cryptococ... 278 8e-85 sp|A1CKJ0|DBP8_ASPCL ATP-dependent RNA helicase dbp8 OS=Aspergill... 281 8e-85 sp|A5DZT7|DBP10_LODEL ATP-dependent RNA helicase DBP10 OS=Loddero... 291 1e-84 sp|Q2UKX3|DBP8_ASPOR ATP-dependent RNA helicase dbp8 OS=Aspergill... 278 1e-84 sp|A2QUY7|DBP5_ASPNC ATP-dependent RNA helicase dbp5 OS=Aspergill... 279 1e-84 sp|Q5ACK7|DRS1_CANAL ATP-dependent RNA helicase DRS1 OS=Candida a... 283 1e-84 sp|A6ZXU0|DBP10_YEAS7 ATP-dependent RNA helicase DBP10 OS=Sacchar... 292 1e-84 sp|A7TJT7|SUB22_VANPO ATP-dependent RNA helicase SUB2-2 OS=Vander... 278 1e-84 sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Or... 288 1e-84 sp|Q9Y6V7|DDX49_HUMAN Probable ATP-dependent RNA helicase DDX49 O... 279 1e-84 sp|Q6BML1|PRP5_DEBHA Pre-mRNA-processing ATP-dependent RNA helica... 290 2e-84 sp|A1D1R8|DRS1_NEOFI ATP-dependent RNA helicase drs1 OS=Neosartor... 288 2e-84 sp|Q18212|DX39B_CAEEL Spliceosome RNA helicase DDX39B homolog OS=... 277 2e-84 sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54 OS=Dictyos... 292 2e-84 sp|Q6FL17|SUB2_CANGA ATP-dependent RNA helicase SUB2 OS=Candida g... 277 2e-84 sp|A1A4H6|DDX27_BOVIN Probable ATP-dependent RNA helicase DDX27 O... 286 3e-84 sp|Q9FZ92|RH44_ARATH Putative DEAD-box ATP-dependent RNA helicase... 282 3e-84 sp|Q9ZRZ8|RH28_ARATH DEAD-box ATP-dependent RNA helicase 28 OS=Ar... 287 3e-84 sp|Q75C39|DBP5_EREGS ATP-dependent RNA helicase DBP5 OS=Eremothec... 277 3e-84 sp|A7TLA0|SUB21_VANPO ATP-dependent RNA helicase SUB2-1 OS=Vander... 277 3e-84 sp|A5E6W6|RRP3_LODEL ATP-dependent rRNA helicase RRP3 OS=Lodderom... 278 3e-84 sp|A3GH91|DBP5_PICST ATP-dependent RNA helicase DBP5 OS=Scheffers... 278 3e-84 sp|Q6CJV1|DRS1_KLULA ATP-dependent RNA helicase DRS1 OS=Kluyverom... 285 4e-84 sp|Q2UQI6|DRS1_ASPOR ATP-dependent RNA helicase drs1 OS=Aspergill... 287 4e-84 sp|Q6FKN8|DBP5_CANGA ATP-dependent RNA helicase DBP5 OS=Candida g... 278 4e-84 sp|A3LQ55|PRP5_PICST Pre-mRNA-processing ATP-dependent RNA helica... 288 5e-84 sp|Q8SR63|RRP3_ENCCU ATP-dependent rRNA helicase RRP3 OS=Encephal... 275 5e-84 sp|Q5B3H7|DBP8_EMENI ATP-dependent RNA helicase dbp8 OS=Emericell... 279 5e-84 sp|Q96GQ7|DDX27_HUMAN Probable ATP-dependent RNA helicase DDX27 O... 286 5e-84 sp|P21507|SRMB_ECOLI ATP-dependent RNA helicase SrmB OS=Escherich... 276 6e-84 sp|A3LNL1|PRP28_PICST Pre-mRNA-splicing ATP-dependent RNA helicas... 277 6e-84 sp|A5E058|PRP5_LODEL Pre-mRNA-processing ATP-dependent RNA helica... 289 8e-84 sp|P0CQ88|PRP28_CRYNJ Pre-mRNA-splicing ATP-dependent RNA helicas... 283 1e-83 sp|P0CQ89|PRP28_CRYNB Pre-mRNA-splicing ATP-dependent RNA helicas... 283 1e-83 sp|A6RC50|DBP5_AJECN ATP-dependent RNA helicase DBP5 OS=Ajellomyc... 277 1e-83 sp|Q6CXB7|HAS1_KLULA ATP-dependent RNA helicase HAS1 OS=Kluyverom... 277 2e-83 sp|Q4FZF3|DDX49_MOUSE Probable ATP-dependent RNA helicase DDX49 O... 276 2e-83 sp|Q6BL34|DBP10_DEBHA ATP-dependent RNA helicase DBP10 OS=Debaryo... 287 2e-83 sp|Q921N6|DDX27_MOUSE Probable ATP-dependent RNA helicase DDX27 O... 283 2e-83 sp|Q0V1Z7|DRS1_PHANO ATP-dependent RNA helicase DRS1 OS=Phaeospha... 284 2e-83 sp|A5DZX2|DBP5_LODEL ATP-dependent RNA helicase DBP5 OS=Lodderomy... 277 2e-83 sp|Q5AVM1|DBP5_EMENI ATP-dependent RNA helicase dbp5 OS=Emericell... 275 3e-83 sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomy... 281 5e-83 sp|Q0CDT1|DBP5_ASPTN ATP-dependent RNA helicase dbp5 OS=Aspergill... 275 5e-83 sp|Q5RFQ5|DDX6_PONAB Probable ATP-dependent RNA helicase DDX6 OS=... 275 5e-83 sp|Q6BRE4|DBP5_DEBHA ATP-dependent RNA helicase DBP5 OS=Debaryomy... 275 6e-83 sp|A1CNV8|DRS1_ASPCL ATP-dependent RNA helicase drs1 OS=Aspergill... 283 1e-82 Sequences not found previously or not previously below threshold: >sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sapiens OX=9606 GN=DDX1 PE=1 SV=2 Length=740 Score = 992 bits (2565), Expect = 0.0, Method: Composition-based stats. Identities = 740/740 (100%), Positives = 740/740 (100%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q4R7L5|DDX1_MACFA ATP-dependent RNA helicase DDX1 OS=Macaca fascicularis OX=9541 GN=DDX1 PE=2 SV=1 Length=740 Score = 991 bits (2563), Expect = 0.0, Method: Composition-based stats. Identities = 737/740 (99%), Positives = 740/740 (100%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLL+QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLTQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK+HIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF+QQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q5NVJ8|DDX1_PONAB ATP-dependent RNA helicase DDX1 OS=Pongo abelii OX=9601 GN=DDX1 PE=2 SV=1 Length=740 Score = 990 bits (2558), Expect = 0.0, Method: Composition-based stats. Identities = 738/739 (99%), Positives = 738/739 (99%), Gaps = 0/739 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQ LAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQGLAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRT 739 EAQTSFLHLGYLPNQLFRT Sbjct 721 EAQTSFLHLGYLPNQLFRT 739 >sp|Q641Y8|DDX1_RAT ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus OX=10116 GN=Ddx1 PE=1 SV=1 Length=740 Score = 984 bits (2544), Expect = 0.0, Method: Composition-based stats. Identities = 723/740 (98%), Positives = 737/740 (99%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGK TIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRAT+GL++GKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATRGLLRGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIP H+KNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPD Y+VKSQH+GNAQV+QTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDSYVVKSQHTGNAQVSQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKYIDNPKLRELLIIGGVAARDQLSVL+NGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ+TSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK+HIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKNHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF+QQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCS+RGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGG+YKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q91VR5|DDX1_MOUSE ATP-dependent RNA helicase DDX1 OS=Mus musculus OX=10090 GN=Ddx1 PE=1 SV=1 Length=740 Score = 984 bits (2543), Expect = 0.0, Method: Composition-based stats. Identities = 722/740 (98%), Positives = 736/740 (99%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCR T+GL+KGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRGTRGLLKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIP H+KNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAPD YIVKSQH+GNAQV+QTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPDNYIVKSQHTGNAQVSQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKYIDNPKLRELLIIGGVAARDQLSVL+NGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ+T DGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQITCDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD+LWERLGK+HIRTDDVHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDKLWERLGKNHIRTDDVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF+QQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCS+RGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSNRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGG+YKGHVD+LAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGNYKGHVDVLAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q0IIK5|DDX1_BOVIN ATP-dependent RNA helicase DDX1 OS=Bos taurus OX=9913 GN=DDX1 PE=2 SV=1 Length=740 Score = 981 bits (2536), Expect = 0.0, Method: Composition-based stats. Identities = 720/740 (97%), Positives = 734/740 (99%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGK TIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQQEGKKGKATIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRATKGL KGKHYYEVSCHDQGLCRVGWS+MQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEEEFKFPPKDGFVALSKAP+ ++VKSQH+G+AQV QTKFLPNAPKALIVEPSRELAE Sbjct 241 NFGEEEFKFPPKDGFVALSKAPESFVVKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKYIDNPKLRELLIIGGVAARDQLSVL+NGVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINR+HNQIPQ+TSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD+VHAKDNTRPGAN Sbjct 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDEVHAKDNTRPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF+QQGGGPDKKGHQF Sbjct 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR GGG+YKGHVD+LAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRTLGGGNYKGHVDVLAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q90WU3|DDX1_CHICK ATP-dependent RNA helicase DDX1 OS=Gallus gallus OX=9031 GN=DDX1 PE=1 SV=1 Length=740 Score = 979 bits (2532), Expect = 0.0, Method: Composition-based stats. Identities = 690/740 (93%), Positives = 718/740 (97%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQ EGKKGK TIKTG +VLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH Sbjct 61 IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCRAT+G+ KGK+YYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 +YGEEFTMHDTIGCYLDIDKG +KFSKNGKDLGLAFE PPH++NQALF ACVLKNAELKF Sbjct 181 SYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEFPPHIRNQALFAACVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEE+FKFPPKDG++ L KAPDG +VKSQH+GNAQV QT+ LPNAPKALIVEPSRELAE Sbjct 241 NFGEEDFKFPPKDGYIGLCKAPDGNVVKSQHTGNAQVVQTQNLPNAPKALIVEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKYIDNPKLRELLIIGGVAARDQLSVLE GVDIVVGTPGRLDDLVSTGKLN Sbjct 301 QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLL QGYSDFINR+H+QIPQ+TSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVP+TVHHVVV VNPKTD+LWERLGK+HIRTD+VHAKDNT PGAN Sbjct 421 KIMHFPTWVDLKGEDSVPETVHHVVVIVNPKTDKLWERLGKNHIRTDEVHAKDNTLPGAN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 +PEMWSEAIKILKGEY VRAIKEHKMDQAIIFCRTKIDCDN+EQYFIQQGGGPD+KGHQF Sbjct 481 TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLHGDRKP ERKQNLERFK+GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVA EKEKVWYHVCSSRGKGCYNTRLKE+GGCTIWYNEMQLL Sbjct 601 HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHLNCTISQVEPDIKVPVD+FDGKVTYGQKRA GGG YKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLNCTISQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYLPNQLFRTF Sbjct 721 EAQTSFLHLGYLPNQLFRTF 740 >sp|Q5XH91|DDX1_XENTR ATP-dependent RNA helicase DDX1 OS=Xenopus tropicalis OX=8364 GN=ddx1 PE=2 SV=1 Length=740 Score = 947 bits (2447), Expect = 0.0, Method: Composition-based stats. Identities = 668/740 (90%), Positives = 713/740 (96%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVM EIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMAEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGKT++KTG++VLNKWQMNPYDRGS+FAIGSDGLCCQSRE+KEWH Sbjct 61 IQIVYETLKDQQEGKKGKTSVKTGSTVLNKWQMNPYDRGSSFAIGSDGLCCQSREIKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCR+T+G+ KGK+YYEVSCHDQGLCRVGWST+QASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRSTRGVNKGKYYYEVSCHDQGLCRVGWSTLQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCY+DID G VK+SKNGKDLGLAF+IP H+KNQA+F +CVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYIDIDNGTVKYSKNGKDLGLAFQIPAHLKNQAVFASCVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEE+FKFPPKDGFVALSKAPDG++VKSQ++G+AQV+Q K LPNAPKALI+EPSRELAE Sbjct 241 NFGEEDFKFPPKDGFVALSKAPDGHVVKSQNTGSAQVSQAKNLPNAPKALIIEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKY+D+PKLRELLIIGGVAA++QL++LENGVDIVVGTPGR+DDL+STGKLN Sbjct 301 QTLNNVKQFKKYVDSPKLRELLIIGGVAAKEQLTLLENGVDIVVGTPGRIDDLISTGKLN 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINR+H QIPQVTSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRIHGQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVP+TVHHVVVPVNPK D+ WERLGK+HIRTD VH KDNTRPG N Sbjct 421 KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKKDKQWERLGKNHIRTDGVHDKDNTRPGGN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 S EMWSEAIK+LKGEY VRAIKEHKMDQAIIFCRTK+DCDN+EQYFIQQGGGPDKKGHQF Sbjct 481 SAEMWSEAIKVLKGEYTVRAIKEHKMDQAIIFCRTKLDCDNMEQYFIQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLH DRKP ERK NLERFKK +VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHSDRKPQERKHNLERFKKCEVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVA EKEKVWYHVCSSRGKGC+NTRLKEDGGCTIWYNE QLLS Sbjct 601 HRIGRVGRAERMGLAISLVAAEKEKVWYHVCSSRGKGCHNTRLKEDGGCTIWYNETQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHL CTISQVEPDIKVP+DEFDGKV YGQ+RA GGG YKGHVDILAPTVQELAALEK Sbjct 661 EIEEHLTCTISQVEPDIKVPLDEFDGKVVYGQRRATGGGLYKGHVDILAPTVQELAALEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYL NQLFRTF Sbjct 721 EAQTSFLHLGYLSNQLFRTF 740 >sp|A2VD92|DDX1_XENLA ATP-dependent RNA helicase DDX1 OS=Xenopus laevis OX=8355 GN=ddx1 PE=2 SV=1 Length=740 Score = 946 bits (2444), Expect = 0.0, Method: Composition-based stats. Identities = 664/740 (90%), Positives = 711/740 (96%), Gaps = 0/740 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV Sbjct 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 IQIVYETLKDQQEGKKGK ++KTG++VLNKWQMNPYDRGSAFAIGSDGLCCQSRE+KEWH Sbjct 61 IQIVYETLKDQQEGKKGKASVKTGSTVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH 120 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 GCR+T+G+ KGK+YYEVSCHDQGLCRVGWST+ ASLDLGTDKFGFGFGGTGKKSHNKQFD Sbjct 121 GCRSTRGVNKGKYYYEVSCHDQGLCRVGWSTLSASLDLGTDKFGFGFGGTGKKSHNKQFD 180 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 NYGEEFTMHDTIGCYLDID VKFSKNGKDLGLAF+IP HMKNQA F +CVLKNAELKF Sbjct 181 NYGEEFTMHDTIGCYLDIDNSIVKFSKNGKDLGLAFQIPSHMKNQAFFTSCVLKNAELKF 240 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 NFGEE+FKFPPKDGFVALSKAPDG++VKSQ++G+AQV+QTK LPNAPKALI+EPSRELAE Sbjct 241 NFGEEDFKFPPKDGFVALSKAPDGHVVKSQNTGSAQVSQTKSLPNAPKALIIEPSRELAE 300 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 QTLNN+KQFKKY+DNPKLRELLIIGGVAA++QL++LENGVDIVVGTPGR+DDL+STGKL+ Sbjct 301 QTLNNVKQFKKYVDNPKLRELLIIGGVAAKEQLTILENGVDIVVGTPGRIDDLISTGKLS 360 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LSQVRFLVLDEADGLLSQGYSDFINR++ QIPQ+TSDGKRLQVIVCSATLHSFDVKKLSE Sbjct 361 LSQVRFLVLDEADGLLSQGYSDFINRIYGQIPQITSDGKRLQVIVCSATLHSFDVKKLSE 420 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KIMHFPTWVDLKGEDSVP+TVHHVVVPVNPK D+ WE+L K+HIRTD VH KDNTRPG N Sbjct 421 KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKKDKQWEKLAKNHIRTDGVHDKDNTRPGGN 480 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 S E+WSEAIK+LKGEY VRAIKEHKMDQAIIFCRTK+DCDN+EQYFIQQGGGPDKKGHQF Sbjct 481 SAEVWSEAIKVLKGEYIVRAIKEHKMDQAIIFCRTKLDCDNMEQYFIQQGGGPDKKGHQF 540 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 SCVCLH DRKP ERK NLERFKK +VRFLICTDVAARGIDI GVPYVINVTLPDEKQNYV Sbjct 541 SCVCLHSDRKPPERKHNLERFKKCEVRFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV 600 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HRIGRVGRAERMGLAISLVA+EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS Sbjct 601 HRIGRVGRAERMGLAISLVASEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 EIEEHL CTISQVEPDIKVP+D+FDGKV YGQ+RA GGG YKGHVDILAPTVQELA+LEK Sbjct 661 EIEEHLTCTISQVEPDIKVPLDDFDGKVVYGQRRATGGGLYKGHVDILAPTVQELASLEK 720 Query 721 EAQTSFLHLGYLPNQLFRTF 740 EAQTSFLHLGYL NQLFR+F Sbjct 721 EAQTSFLHLGYLSNQLFRSF 740 >sp|Q9VNV3|DDX1_DROME ATP-dependent RNA helicase Ddx1 OS=Drosophila melanogaster OX=7227 GN=Ddx1 PE=2 SV=1 Length=727 Score = 770 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 433/731 (59%), Positives = 552/731 (76%), Gaps = 13/731 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M AF E GV+PE+ A +E+DW LPTD+QAE+IPLILGGGDVLMAAETGSGKTGAF +P+ Sbjct 1 MTAFEEFGVLPELGMATDELDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 +QIV+ETL+D +EGK + W M+ +DRG+A A+ DGL CQSRE KEWH Sbjct 61 LQIVWETLRDLEEGK--AGKGGAIGGAVTPWTMSFFDRGNALAVTPDGLRCQSREFKEWH 118 Query 121 GCRATKGLM-KGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQF 179 GCRAT G+ KGK Y+E + D+GLCRVGWST QA+LDLGT + GFGFGGTGKKS+N+QF Sbjct 119 GCRATTGVRGKGKFYFEATVTDEGLCRVGWSTQQANLDLGTCRMGFGFGGTGKKSNNRQF 178 Query 180 DNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELK 239 D+YGE F D IGC LD+ V F+KNG++LG+AF +P ++ + +PA VLKNAE++ Sbjct 179 DDYGEAFGKADVIGCLLDLKNQEVSFTKNGQNLGVAFRLPDNLAKETFYPAVVLKNAEMQ 238 Query 240 FNFGEEEFKFPPKDGFVALSKA-PDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 FNFG+ +FK+ P +GFV +A P+ A K PNAP+A+I+EPSREL Sbjct 239 FNFGKTDFKYAPGNGFVGACQAGPEHSKANPITGPAAGAPSAKPAPNAPQAIIMEPSREL 298 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK 358 AEQT N I++FK ++ NP++R LL+IGGV +Q + L G IVVGTPGRL++++++G Sbjct 299 AEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEEMINSGL 358 Query 359 LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKL 418 + L+ RF VLDEAD LL QGY++ I+R+H QIP++TSDG+RLQ++VCSATLH+F+VKK+ Sbjct 359 VLLTHCRFFVLDEADALLKQGYTELIDRLHKQIPKITSDGRRLQMVVCSATLHAFEVKKM 418 Query 419 SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 +E++MHFPTWVDLKGED+VP+TVHHVV V+P+ D W+ L + I TD VH +DN PG Sbjct 419 AERLMHFPTWVDLKGEDAVPETVHHVVCLVDPQMDTTWQSLRQP-IGTDGVHDRDNVHPG 477 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 +S E S+A+K+LKGEY V AI +H MD+AIIFCRTK DCDNLE++ Q+G G Sbjct 478 NHSKETLSQAVKLLKGEYCVHAIDKHNMDRAIIFCRTKQDCDNLERFLRQRG------GK 531 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 +SCVCLHGDRKP ERK+NLE FK+ V+FLICTDVAARG+DI G+P++INVTLPD+K N Sbjct 532 HYSCVCLHGDRKPQERKENLEMFKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTN 591 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYH--VCSSRGKGCYNTRLKEDGGCTIWYNEM 656 YVHRIGRVGRAERMGLAISLVAT EKVWYH C SRG+ C NT L E GC IWYNE Sbjct 592 YVHRIGRVGRAERMGLAISLVATVPEKVWYHGEWCKSRGRSCNNTNLTEVRGCCIWYNEP 651 Query 657 QLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELA 716 LL+E+E+HLN TI QV+ + VPV++FDGKV YGQK G Y+ HV+ L PTV++L Sbjct 652 NLLAEVEDHLNITIQQVDKTMDVPVNDFDGKVVYGQKNLRTGSGYEDHVEQLVPTVRKLT 711 Query 717 ALEKEAQTSFL 727 LE ++Q+ FL Sbjct 712 ELELQSQSLFL 722 >sp|Q55CP6|DDX1_DICDI Probable ATP-dependent RNA helicase ddx1 OS=Dictyostelium discoideum OX=44689 GN=ddx1 PE=3 SV=1 Length=765 Score = 641 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 338/772 (44%), Positives = 464/772 (60%), Gaps = 58/772 (8%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M+AF ++GV+PEI +A+EE+DWLLPT IQ E+IPLILGGGDVL AAETGSGKTGAF++P+ Sbjct 1 MSAFEDLGVLPEIIKAIEELDWLLPTPIQTEAIPLILGGGDVLAAAETGSGKTGAFALPI 60 Query 61 IQIVYETLKDQQEGKKGKTT----------IKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 +QI YETL + E T G + +++ DR A+ DGL Sbjct 61 LQITYETLNKKAEIPIIAPTNTSGEDGTSGGGGGGGGGDTIELDQIDRDKNMAV--DGLI 118 Query 111 CQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGT 170 CQSR +W G +ATKG+ GK YYE D+GLCR+G++ ++S ++GTDKF +G+GGT Sbjct 119 CQSRS-SDWCGIKATKGISSGKFYYESIVRDEGLCRIGFALKKSSRNIGTDKFSWGYGGT 177 Query 171 GKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPA 230 GKKSH +F +YG+ F +D IGCY++ D+ + F+KNG+D G AF + K +PA Sbjct 178 GKKSHESKFIDYGKPFGNNDVIGCYINFDEEIIGFTKNGQDFGEAFTF--NSKAGIFYPA 235 Query 231 CVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT------------ 278 VLKNAE++FNFG + K K G+ +++A ++ + Sbjct 236 LVLKNAEMEFNFGSKPMKHDLK-GYKPINQAELLIDQQTSTQIDNSKNNNNNNNKKGSGN 294 Query 279 ----------------QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 P +LI+EP+RELA+Q + I F KY+D+PK++ L Sbjct 295 NKKNKGKDDDKMNDEDNNNKQPRKTLSLIIEPTRELADQAYSAILNFSKYLDSPKIQVSL 354 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + +E DI++GTPGRL+ LV G ++LS ++F VLDEAD L+ + Sbjct 355 CIGGEKSNGGRNKIEG--DIIIGTPGRLESLVKEGSIDLSSIKFFVLDEADQLIDDNLA- 411 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + N I G+ LQV+ SATLHS V K E+I PTWVDLKG D +PD + Sbjct 412 ----IVNFIYNKLPIGQNLQVLFFSATLHSTKVIKFCEQITKNPTWVDLKGRDFIPDLIT 467 Query 443 HVVVPVNP-KTDRLW-ERLGKSHIRTDDVHAKDNTRPG-ANSPEMWSEAIKILKGEYAVR 499 H V +P K + LW IRTD VHA D + G PE SEAIK+LK + ++ Sbjct 468 HAYVKADPIKFESLWRNSENPLRIRTDGVHASDVQQFGKLKEPEQKSEAIKLLKAQLLLK 527 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG-PDKKGHQFSCVCLHGDRK-PHERKQN 557 I+ KMDQAIIF RT++DCD++ Q+ GGG +FS LHG RK N Sbjct 528 CIQSFKMDQAIIFARTRLDCDHIHQFLKDAGGGNTSGLEGEFSSTVLHGGDNISRARKDN 587 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 LE+F+ GDVRFLICTDVAARGIDI G+PY+IN TLP+ ++Y+HR+GRVGR++R+GLAIS Sbjct 588 LEKFRNGDVRFLICTDVAARGIDIRGLPYMINYTLPESFEDYIHRVGRVGRSDRIGLAIS 647 Query 618 LVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI 677 LVA E+EKVWYH C +GKGC+NT+L E+GGC IWY+E QL + I+E++ +++ D Sbjct 648 LVAYEQEKVWYHTCRDKGKGCHNTKLTENGGCCIWYDEPQLFTAIQENIGPI--ELDSDF 705 Query 678 KVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHL 729 ++P D K YK H + L V +L+ LE+ Q +L L Sbjct 706 QLPKDMKQLNFGGSTKLTGASADYKPHTEELRSRVLQLSQLEETIQIDYLTL 757 >sp|Q41741|IF4A_MAIZE Eukaryotic initiation factor 4A OS=Zea mays OX=4577 PE=2 SV=1 Length=410 Score = 362 bits (930), Expect = 1e-117, Method: Composition-based stats. Identities = 121/487 (25%), Positives = 203/487 (42%), Gaps = 95/487 (20%) Query 166 GFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGL-------AFEI 218 G G + +KQ+D +E D Y D+ + F G L FE Sbjct 3 GLAPEGSQFDDKQYDKKMQEILTEDFFTSYDDVCE---SFDSMGLQENLLRGIYAYGFEK 59 Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 P ++ + + P C G + +A G K+ + + Sbjct 60 PSAIQQRGIVPFC---------------------KGLDVIQQAQSG-TGKTATFCSGILQ 97 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L + Sbjct 98 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVREDQRILAS 154 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 155 GVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLP------ 208 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++QV V SAT+ + +++ K M+ P + +K ++ + + V ++ + +L Sbjct 209 SKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNIDKEDWKL--- 264 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 L Y AI Q++IF T+ Sbjct 265 -------------------------------DTLCDLYETLAIT-----QSVIFVNTRRK 288 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L + + HGD + R + F+ G R LI TD+ ARG Sbjct 289 VDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 339 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + V + Sbjct 340 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERIVFDV-----QRF 394 Query 639 YNTRLKE 645 YN ++E Sbjct 395 YNVTVEE 401 Score = 81.7 bits (200), Expect = 4e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (49%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 38 SFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 97 Query 63 IVYETLKDQQ 72 + L + Q Sbjct 98 QLDYGLVECQ 107 >sp|Q2GWJ5|FAL1_CHAGB ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=FAL1 PE=3 SV=1 Length=394 Score = 358 bits (918), Expect = 6e-116, Method: Composition-based stats. Identities = 114/429 (27%), Positives = 182/429 (42%), Gaps = 66/429 (15%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D + F + F + LK + L+ + +G E V + K D Sbjct 12 DEKIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQA 71 Query 269 SQHSGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G + + +AL++ P+RELA Q + + Y++ ++ Sbjct 72 QSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMN---VQCHA 128 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + L+ G IV GTPGR+ D++ L ++ LVLDEAD LL+QG+ + Sbjct 129 CIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFRE 188 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 189 QIYDVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRILVKRDELTLEGLK 241 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V + + L Y I Sbjct 242 QYFIAVEKEDWKF----------------------------------DTLCDLYDTLTIT 267 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC T+ D L + F+ +HGD ER ++ F+ Sbjct 268 -----QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGDMPQKERDSIMQDFR 313 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V +E Sbjct 314 QGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSE 373 Query 623 KEKVWYHVC 631 ++ + Sbjct 374 DVRILRDIE 382 Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 52/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 28 TFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQ 87 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 88 VIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 147 Query 121 GCRATKGLMKG 131 T G + Sbjct 148 IVSGTPGRVAD 158 >sp|Q9P735|FAL1_NEUCR ATP-dependent RNA helicase fal-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=fal-1 PE=3 SV=2 Length=400 Score = 357 bits (916), Expect = 1e-115, Method: Composition-based stats. Identities = 117/443 (26%), Positives = 189/443 (43%), Gaps = 71/443 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D + F + F + LK + L+ + +G E V + K D Sbjct 11 DEKIQFSTSKEVTVHPTFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQA 70 Query 269 SQHSGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G + + +AL++ P+RELA Q + + Y++ ++ Sbjct 71 QSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMN---VQCHA 127 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + L+ G IV GTPGR+ D++ L ++ LVLDEAD LL+QG+ + Sbjct 128 CIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFRE 187 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 188 QIYDVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRILVKRDELTLEGLK 240 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V + + L Y I Sbjct 241 QYFIAVEKEDWKF----------------------------------DTLCDLYDTLTIT 266 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC T+ D L + F+ +HGD ER ++ F+ Sbjct 267 -----QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGDMPQKERDSIMQDFR 312 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V +E Sbjct 313 QGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSE 372 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 373 DVRILRDI-----ELYYSTQIDE 390 Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 52/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 27 TFESMSLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQ 86 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 87 VIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 146 Query 121 GCRATKGLMKG 131 T G + Sbjct 147 IVSGTPGRVAD 157 >sp|Q4IAA0|FAL1_GIBZE ATP-dependent RNA helicase FAL1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=FAL1 PE=3 SV=1 Length=401 Score = 354 bits (909), Expect = 2e-114, Method: Composition-based stats. Identities = 117/443 (26%), Positives = 188/443 (42%), Gaps = 71/443 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D + F + F + LK L+ + +G E V + K D Sbjct 12 DERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQA 71 Query 269 SQHSGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G + + +AL++ P+RELA Q + + Y++ ++ Sbjct 72 QSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMN---VQCHA 128 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + L+ G IV GTPGR+ D++ L ++ LVLDEAD LL++G+ + Sbjct 129 CIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNKGFRE 188 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 189 QIYDVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRILVKRDELTLEGLK 241 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V + + L Y I Sbjct 242 QYFIAVEKEDWKF----------------------------------DTLCDLYDTLTIT 267 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC T+ D L + F+ +HGD ER ++ F+ Sbjct 268 -----QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGDMPQKERDSIMQDFR 313 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V TE Sbjct 314 QGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTE 373 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 374 DVRILRDI-----ELYYSTQIDE 391 Score = 90.6 bits (223), Expect = 4e-18, Method: Composition-based stats. Identities = 26/131 (20%), Positives = 52/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I + G D + A++G+GKT FSI ++Q Sbjct 28 TFESMSLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQ 87 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 88 VIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 147 Query 121 GCRATKGLMKG 131 T G + Sbjct 148 IVSGTPGRVAD 158 >sp|Q4P184|FAL1_USTMA ATP-dependent RNA helicase FAL1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=FAL1 PE=3 SV=1 Length=397 Score = 354 bits (907), Expect = 3e-114, Method: Composition-based stats. Identities = 118/446 (26%), Positives = 192/446 (43%), Gaps = 71/446 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGY 265 N D LAFE H+K F A LK L+ + + E+ + + + + D Sbjct 6 NAGDSKLAFESSEHVKVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVI 65 Query 266 IVKSQHSGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 +G + + +AL++ P+RELA Q + + Y++ ++ Sbjct 66 AQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLN---VQ 122 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG 379 IGG + + + L+ G IV GTPGR+ D++ L ++ L+LDE+D LL+ G Sbjct 123 CHACIGGTSVGEDIRKLDYGQHIVSGTPGRVYDMIRRRHLRTKNIKMLILDESDELLNMG 182 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + D I ++ +P T QV++ SATL DV +++ K M P + +K ++ + Sbjct 183 FKDQIYDVYRYLPPST------QVVLLSATLP-QDVLEMTSKFMTDPVRILVKRDELTLE 235 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + V V + + L Y Sbjct 236 GIKQFFVAVEKEEWKF----------------------------------DTLCDLYDTL 261 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I QA+IFC T+ D L K + F +HG+ + ER + + Sbjct 262 TIT-----QAVIFCNTRRKVDWLSAKM---------KENNFQVSSMHGEMQQKERDEVMA 307 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 F++G R LI TDV ARGIDI + VIN LP ++NY+HRIGR GR R G+AI+ V Sbjct 308 EFRQGSSRVLITTDVWARGIDIANISLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFV 367 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKE 645 + + + + Y+T++ E Sbjct 368 TVDDVRTLRDI-----EQFYSTQIDE 388 Score = 99.0 bits (245), Expect = 8e-21, Method: Composition-based stats. Identities = 32/134 (24%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F MG+ ++ + + ++ P+ IQ +I I+ G DV+ A++G+GKT FSI ++ Sbjct 24 TTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISML 83 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 Q + TL++ Q T + Y A G K +G Sbjct 84 QSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNVQCHAC-IGGTSVGEDIRKLDYG 142 Query 122 CRATKGLMKGKHYY 135 G G+ Y Sbjct 143 QHIVSG-TPGRVYD 155 >sp|A4QU31|FAL1_PYRO7 ATP-dependent RNA helicase FAL1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=FAL1 PE=3 SV=1 Length=401 Score = 353 bits (905), Expect = 7e-114, Method: Composition-based stats. Identities = 115/440 (26%), Positives = 188/440 (43%), Gaps = 71/440 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 + F + F + LK + L+ + +G E V + K D Sbjct 15 MEFTTSKEVTVHPTFESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSG 74 Query 272 SGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +G + + +AL++ P+RELA Q + + Y++ ++ IG Sbjct 75 TGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMN---VQCHACIG 131 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + + L+ G IV GTPGR+ D++ L ++ LVLDEAD LL+QG+ + I Sbjct 132 GTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNQGFREQIY 191 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 192 DVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRILVKRDELTLEGLKQYF 244 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + + + L Y I Sbjct 245 IAIEKEDWKF----------------------------------DTLCDLYDTLTIT--- 267 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QA+IFC T+ D L + F+ +HGD ER ++ F++G+ Sbjct 268 --QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGDMPQKERDSIMQDFRQGN 316 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V +E + Sbjct 317 SRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVR 376 Query 626 VWYHVCSSRGKGCYNTRLKE 645 + + + Y+T++ E Sbjct 377 ILRDI-----ELYYSTQIDE 391 Score = 90.2 bits (222), Expect = 7e-18, Method: Composition-based stats. Identities = 26/131 (20%), Positives = 52/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I + G D + A++G+GKT FSI ++Q Sbjct 28 TFESMALKESLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISMLQ 87 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 88 VIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 147 Query 121 GCRATKGLMKG 131 T G + Sbjct 148 IVSGTPGRVAD 158 >sp|Q4WEB4|FAL1_ASPFU ATP-dependent RNA helicase fal1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=fal1 PE=3 SV=2 Length=398 Score = 351 bits (900), Expect = 3e-113, Method: Composition-based stats. Identities = 116/451 (26%), Positives = 188/451 (42%), Gaps = 71/451 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSK 260 + ++ L F + F LK + L+ + +G E V + K Sbjct 1 MIWANGANSDRLEFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICK 60 Query 261 APDGYIVKSQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 D +G L +AL++ P+RELA Q + I Y++ Sbjct 61 GRDTIAQAQSGTGKTATFSIGILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMN 120 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 ++ IGG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD Sbjct 121 ---VQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADE 177 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 LL++G+ + I ++ +P T QV+V SATL +DV ++ K M P V +K + Sbjct 178 LLNRGFREQIYDVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRVLVKRD 230 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + + + + V + + L Sbjct 231 ELTLEGIKQYFIAVEKEEWKF----------------------------------DTLCD 256 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 Y I QA+IFC T+ D L + F+ +HG+ ER Sbjct 257 LYDTLTIT-----QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKER 302 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 ++ F++G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+ Sbjct 303 DSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGV 362 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 AI+ V ++ ++ + Y+T++ E Sbjct 363 AINFVTSDDVRILRDIEL-----YYSTQIDE 388 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 25 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSIGILQ 84 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 85 VIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQH 144 Query 121 GCRATKGLMKG 131 T G + Sbjct 145 VVSGTPGRVAD 155 >sp|A1C595|FAL1_ASPCL ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=fal1 PE=3 SV=1 Length=399 Score = 349 bits (895), Expect = 1e-112, Method: Composition-based stats. Identities = 116/440 (26%), Positives = 186/440 (42%), Gaps = 71/440 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L F + F LK + L+ + +G E V + K D Sbjct 13 LEFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSG 72 Query 272 SGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +G L +AL++ P+RELA Q + I Y++ ++ IG Sbjct 73 TGKTATFSISILQVIDTAVRETQALVLSPTRELATQIQSVIMALGDYMN---VQCHACIG 129 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + + L+ G +V GTPGR+ D++ L ++ LVLDEAD LL++G+ + I Sbjct 130 GTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIY 189 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P T QV+V SATL +DV ++ K M P V +K ++ + + Sbjct 190 DVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYF 242 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + V + + L Y I Sbjct 243 IAVEKEEWKF----------------------------------DTLCDLYDTLTIT--- 265 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QA+IFC T+ D L + F+ +HG+ ER ++ F++G+ Sbjct 266 --QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKERDSIMQDFRQGN 314 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V ++ + Sbjct 315 SRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVR 374 Query 626 VWYHVCSSRGKGCYNTRLKE 645 + + + Y+T++ E Sbjct 375 ILRDI-----ELYYSTQIDE 389 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 86 VIDTAVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQH 145 Query 121 GCRATKGLMKG 131 T G + Sbjct 146 VVSGTPGRVAD 156 >sp|Q5AUL4|FAL1_EMENI ATP-dependent RNA helicase fal1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=fal1 PE=3 SV=1 Length=399 Score = 349 bits (895), Expect = 2e-112, Method: Composition-based stats. Identities = 115/443 (26%), Positives = 189/443 (43%), Gaps = 71/443 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D + F + F LK + L+ + +G E V + K D Sbjct 10 DDKMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQA 69 Query 269 SQHSGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G + + + +AL++ P+RELA Q + I Y++ ++ Sbjct 70 QSGTGKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMN---VQCHA 126 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD LL++G+ + Sbjct 127 CIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFRE 186 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P T QV+V SATL +DV ++ K M P V +K ++ + + Sbjct 187 QIYDVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRVLVKRDELTLEGIK 239 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V + + L Y I Sbjct 240 QYFIAVEKEEWKF----------------------------------DTLCDLYDTLTIT 265 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC T+ D L + F+ +HG+ ER ++ F+ Sbjct 266 -----QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKERDSIMQDFR 311 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V ++ Sbjct 312 QGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSD 371 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 372 DVRILRDI-----ELYYSTQIDE 389 Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 52/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI +Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 86 VIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQH 145 Query 121 GCRATKGLMKG 131 T G + Sbjct 146 VVSGTPGRVAD 156 >sp|A1D071|FAL1_NEOFI ATP-dependent RNA helicase fal1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=fal1 PE=3 SV=1 Length=399 Score = 349 bits (894), Expect = 2e-112, Method: Composition-based stats. Identities = 116/440 (26%), Positives = 186/440 (42%), Gaps = 71/440 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L F + F LK + L+ + +G E V + K D Sbjct 13 LEFSTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSG 72 Query 272 SGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +G L +AL++ P+RELA Q + I Y++ ++ IG Sbjct 73 TGKTATFSISILQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMN---VQCHACIG 129 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + + L+ G +V GTPGR+ D++ L ++ LVLDEAD LL++G+ + I Sbjct 130 GTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIY 189 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P T QV+V SATL +DV ++ K M P V +K ++ + + Sbjct 190 DVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYF 242 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + V + + L Y I Sbjct 243 IAVEKEEWKF----------------------------------DTLCDLYDTLTIT--- 265 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QA+IFC T+ D L + F+ +HG+ ER ++ F++G+ Sbjct 266 --QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKERDSIMQDFRQGN 314 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V ++ + Sbjct 315 SRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVR 374 Query 626 VWYHVCSSRGKGCYNTRLKE 645 + + + Y+T++ E Sbjct 375 ILRDI-----ELYYSTQIDE 389 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 86 VIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQH 145 Query 121 GCRATKGLMKG 131 T G + Sbjct 146 VVSGTPGRVAD 156 >sp|A6QSQ0|FAL1_AJECN ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=FAL1 PE=3 SV=1 Length=450 Score = 350 bits (899), Expect = 2e-112, Method: Composition-based stats. Identities = 114/440 (26%), Positives = 185/440 (42%), Gaps = 71/440 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 + F + F LK L+ + +G E V + K D Sbjct 13 MEFTTSKEVTVAPTFEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSG 72 Query 272 SGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +G L +AL++ P+RELA Q + + Y++ ++ IG Sbjct 73 TGKTATFSISILQVIDTVLRETQALVLSPTRELATQIQSVVMALGDYMN---VQCHACIG 129 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + + L++G +V GTPGR+ D++ L ++ LVLDEAD LL++G+ + I Sbjct 130 GTNVGEDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIY 189 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 190 DVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRILVKRDELTLEGLKQYF 242 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + V + + L Y I Sbjct 243 IAVEKEEWKF----------------------------------DTLCDLYDTLTIT--- 265 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QA+IFC T+ D L + F+ +HG+ ER ++ F++G+ Sbjct 266 --QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKERDSIMQDFRQGN 314 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V +E + Sbjct 315 SRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVR 374 Query 626 VWYHVCSSRGKGCYNTRLKE 645 + + Y+T++ E Sbjct 375 ILRDIEL-----YYSTQIDE 389 Score = 93.7 bits (231), Expect = 7e-19, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFEDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ L++ Q T + Y A IG + R++ H Sbjct 86 VIDTVLRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDHGQH 145 Query 121 GCRATKGLMKG 131 T G + Sbjct 146 VVSGTPGRVAD 156 >sp|Q2UAK1|FAL1_ASPOR ATP-dependent RNA helicase fal1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=fal1 PE=3 SV=1 Length=398 Score = 348 bits (893), Expect = 3e-112, Method: Composition-based stats. Identities = 116/451 (26%), Positives = 188/451 (42%), Gaps = 71/451 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSK 260 + K + F + F LK + L+ + +G E V + K Sbjct 1 MYTDKGANSDRMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICK 60 Query 261 APDGYIVKSQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 D +G L +AL++ P+RELA Q + I Y++ Sbjct 61 GRDTIAQAQSGTGKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMN 120 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 ++ IGG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD Sbjct 121 ---VQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADE 177 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 LL++G+ + I ++ +P T QV+V SATL +DV ++ K M P V +K + Sbjct 178 LLNRGFREQIYDVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRVLVKRD 230 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + + + + V + + L Sbjct 231 ELTLEGIKQYFIAVEKEEWKF----------------------------------DTLCD 256 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 Y I QA+IFC T+ D L + F+ +HG+ ER Sbjct 257 LYDTLTIT-----QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKER 302 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 ++ F++G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+ Sbjct 303 DSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGV 362 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 AI+ V ++ ++ + + Y+T++ E Sbjct 363 AINFVTSDDVRILRDI-----ELYYSTQIDE 388 Score = 92.9 bits (229), Expect = 8e-19, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 25 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 84 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 85 VIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQH 144 Query 121 GCRATKGLMKG 131 T G + Sbjct 145 VVSGTPGRVAD 155 >sp|Q0CAS8|FAL1_ASPTN ATP-dependent RNA helicase fal1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=fal1 PE=3 SV=1 Length=399 Score = 347 bits (891), Expect = 7e-112, Method: Composition-based stats. Identities = 115/440 (26%), Positives = 186/440 (42%), Gaps = 71/440 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 + F + F LK + L+ + +G E V + K D Sbjct 13 MEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSG 72 Query 272 SGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +G L +AL++ P+RELA Q + I Y++ ++ IG Sbjct 73 TGKTATFAISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMN---VQCHACIG 129 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + + L+ G +V GTPGR+ D++ L ++ LVLDEAD LL++G+ + I Sbjct 130 GTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIY 189 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P T QV+V SATL +DV ++ K M P V +K ++ + + Sbjct 190 DVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYF 242 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + V + + L Y I Sbjct 243 IAVEKEEWKF----------------------------------DTLCDLYDTLTIT--- 265 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QA+IFC T+ D L + F+ +HG+ ER ++ F++G+ Sbjct 266 --QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKERDSIMQDFRQGN 314 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V ++ + Sbjct 315 SRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVR 374 Query 626 VWYHVCSSRGKGCYNTRLKE 645 + + + Y+T++ E Sbjct 375 ILRDI-----ELYYSTQIDE 389 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 26/131 (20%), Positives = 53/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT F+I ++Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 86 VIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQH 145 Query 121 GCRATKGLMKG 131 T G + Sbjct 146 VVSGTPGRVAD 156 >sp|Q1DTB3|FAL1_COCIM ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis (strain RS) OX=246410 GN=FAL1 PE=3 SV=2 Length=399 Score = 347 bits (891), Expect = 8e-112, Method: Composition-based stats. Identities = 118/443 (27%), Positives = 187/443 (42%), Gaps = 71/443 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D + F + F LK L+ + +G E V + K D Sbjct 10 DERIEFTTSKEVTVAPTFDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQA 69 Query 269 SQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G L +AL++ P+RELA Q N I Y++ ++ Sbjct 70 QSGTGKTATFAISILQVIDTALRETQALVLSPTRELATQIQNVIMAVGDYMN---VQCHA 126 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG D + L++G +V GTPGR+ D++ L ++ LVLDEAD LL++G+ + Sbjct 127 CIGGTNVGDDIRKLDHGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADDLLARGFRE 186 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 187 QIYDVYRYLPPAT------QVVVLSATLP-YDVLSMTTKFMTDPVRILVKRDELTLEGLK 239 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V + + L Y I Sbjct 240 QYFIAVEKEEWKF----------------------------------DTLCDLYDTLTIT 265 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC T+ D L + F+ +HG+ ER ++ F+ Sbjct 266 -----QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKERDSIMQDFR 311 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +G+ R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V +E Sbjct 312 QGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSE 371 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 372 DVRILRDI-----ELYYSTQIDE 389 Score = 93.7 bits (231), Expect = 5e-19, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 50/132 (38%), Gaps = 4/132 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ IQ+ +I I G D + A++G+GKT F+I ++Q Sbjct 26 TFDDMHLKENLLRGIYAYGFESPSAIQSRAIVQICKGRDTIAQAQSGTGKTATFAISILQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG- 121 ++ L++ Q T + Y A G K HG Sbjct 86 VIDTALRETQALVLSPTRELATQIQNVIMAVGDYMNVQCHAC-IGGTNVGDDIRKLDHGQ 144 Query 122 --CRATKGLMKG 131 T G + Sbjct 145 HVVSGTPGRVAD 156 >sp|A5AAE5|FAL1_ASPNC ATP-dependent RNA helicase fal1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=fal1 PE=3 SV=2 Length=399 Score = 347 bits (890), Expect = 9e-112, Method: Composition-based stats. Identities = 115/440 (26%), Positives = 186/440 (42%), Gaps = 71/440 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 + F + F LK + L+ + +G E V + K D Sbjct 13 MEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSG 72 Query 272 SGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +G L +AL++ P+RELA Q + I Y++ ++ IG Sbjct 73 TGKTATFSISILQVIDTVVRESQALVLSPTRELATQIQSVIMALGDYMN---VQCHACIG 129 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + + L+ G +V GTPGR+ D++ L ++ LVLDEAD LL++G+ + I Sbjct 130 GTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFREQIY 189 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P T QV+V SATL +DV ++ K M P V +K ++ + + Sbjct 190 DVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYF 242 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + V + + L Y I Sbjct 243 IAVEKEEWKF----------------------------------DTLCDLYDTLTIT--- 265 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QA+IFC T+ D L + F+ +HG+ ER ++ F++G+ Sbjct 266 --QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKERDSIMQDFRQGN 314 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V ++ + Sbjct 315 SRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVR 374 Query 626 VWYHVCSSRGKGCYNTRLKE 645 + + + Y+T++ E Sbjct 375 ILRDI-----ELYYSTQIDE 389 Score = 92.9 bits (229), Expect = 9e-19, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 86 VIDTVVRESQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQH 145 Query 121 GCRATKGLMKG 131 T G + Sbjct 146 VVSGTPGRVAD 156 >sp|P41382|IF410_TOBAC Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 347 bits (890), Expect = 1e-111, Method: Composition-based stats. Identities = 116/493 (24%), Positives = 201/493 (41%), Gaps = 104/493 (21%) Query 166 GFGGTGKKSHNKQFDNYGEEFT---MHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHM 222 G G + +Q+D E + Y ++ Sbjct 3 GLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDS--------------------- 41 Query 223 KNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ---- 276 F A L+ L+ + +G E+ + G V K D +++ SG + Sbjct 42 -----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATF 94 Query 277 ----VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ Sbjct 95 CSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVRED 151 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 +L++GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 152 QRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP 211 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 ++QV V SAT+ + +++ K M+ P + +K +D + + V V+ + Sbjct 212 ------PKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDDVTLEGIKQFYVNVDKEE 264 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 +L E + + Q++IF Sbjct 265 WKL---------------------------------------ETLCDLYETLAITQSVIF 285 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 T+ D L + + HGD + R + F+ G R LI T Sbjct 286 VNTRRKVDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+ ARGID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + Sbjct 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDI-- 394 Query 633 SRGKGCYNTRLKE 645 + YN ++E Sbjct 395 ---QKFYNVVIEE 404 Score = 81.7 bits (200), Expect = 5e-15, Method: Composition-based stats. Identities = 20/70 (29%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 Query 63 IVYETLKDQQ 72 + +L + Q Sbjct 101 QLDYSLVECQ 110 >sp|Q40467|IF414_TOBAC Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 347 bits (890), Expect = 2e-111, Method: Composition-based stats. Identities = 116/493 (24%), Positives = 201/493 (41%), Gaps = 104/493 (21%) Query 166 GFGGTGKKSHNKQFDNYGEEFT---MHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHM 222 G G + +Q+D E + Y ++ Sbjct 3 GLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDS--------------------- 41 Query 223 KNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ---- 276 F A L+ L+ + +G E+ + G V K D +++ SG + Sbjct 42 -----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATF 94 Query 277 ----VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ Sbjct 95 CSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVRED 151 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 +L++GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 152 QRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP 211 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 ++QV V SAT+ + +++ K M P + +K +D + + V V+ + Sbjct 212 ------PKIQVGVFSATMPP-EALEITRKFMSKPVRILVKRDDVTLEGIKQFYVNVDKEE 264 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 +L E + + Q++IF Sbjct 265 WKL---------------------------------------ETLCDLYETLAITQSVIF 285 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 T+ D L + + HGD + R + F+ G R LI T Sbjct 286 VNTRRKVDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+ ARGID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + Sbjct 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDI-- 394 Query 633 SRGKGCYNTRLKE 645 + YN ++E Sbjct 395 ---QKFYNVVIEE 404 Score = 81.7 bits (200), Expect = 5e-15, Method: Composition-based stats. Identities = 20/70 (29%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 Query 63 IVYETLKDQQ 72 + +L + Q Sbjct 101 QLDYSLVECQ 110 >sp|Q40468|IF415_TOBAC Eukaryotic initiation factor 4A-15 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 347 bits (889), Expect = 2e-111, Method: Composition-based stats. Identities = 117/487 (24%), Positives = 199/487 (41%), Gaps = 92/487 (19%) Query 166 GFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGL-------AFEI 218 G G + +QFD E D + D+ + F G L FE Sbjct 3 GAAPEGSQFDARQFDTKMNELLSADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEK 62 Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 P ++ + + P C G + +A G K+ + + Sbjct 63 PSAIQQRGIVPFC---------------------KGLDVIQQAQSG-TGKTATFCSGILQ 100 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L + Sbjct 101 QLAYELLECQALVLAPTRELAQQIEKVMRALGDYLG---VKVTACVGGTSVREDQRILSS 157 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 158 GVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------ 211 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++QV V SAT+ + +++ K M+ P + +K ++ + + V V+ + +L Sbjct 212 PKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKL--- 267 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 E + + Q++IF T+ Sbjct 268 ------------------------------------ETLCDLYETLAITQSVIFVNTRRK 291 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L + + HGD + R + F+ G R LI TD+ ARG Sbjct 292 VDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + Sbjct 343 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDI-----QRF 397 Query 639 YNTRLKE 645 YN ++E Sbjct 398 YNVVIEE 404 Score = 81.7 bits (200), Expect = 4e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 34/70 (49%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100 Query 63 IVYETLKDQQ 72 + L + Q Sbjct 101 QLAYELLECQ 110 >sp|A7EM88|FAL1_SCLS1 ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=fal1 PE=3 SV=1 Length=399 Score = 345 bits (885), Expect = 5e-111, Method: Composition-based stats. Identities = 114/440 (26%), Positives = 186/440 (42%), Gaps = 71/440 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 + F + F LK L+ + +G E V + K D Sbjct 13 MEFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSG 72 Query 272 SGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +G + + +AL++ P+RELA Q + + Y++ ++ IG Sbjct 73 TGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMN---VQCHACIG 129 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + + L+ G IV GTPGR+ D++ L ++ LVLDEAD LL++G+ + I Sbjct 130 GTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIY 189 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 190 DVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRILVKRDELTLEGLKQYF 242 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + V + + L Y I Sbjct 243 IAVEKEEWKF----------------------------------DTLCDLYDTLTIT--- 265 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QA+IFC T+ D L + F+ +HG+ ER ++ F++G+ Sbjct 266 --QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKERDSIMQDFRQGN 314 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V +E + Sbjct 315 SRVLISTDVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTSEDVR 374 Query 626 VWYHVCSSRGKGCYNTRLKE 645 + + + Y+T++ E Sbjct 375 ILRDI-----ELYYSTQIDE 389 Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 86 VIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 145 Query 121 GCRATKGLMKG 131 T G + Sbjct 146 IVSGTPGRVAD 156 >sp|A6S4N4|FAL1_BOTFB ATP-dependent RNA helicase fal1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=fal1 PE=3 SV=1 Length=399 Score = 345 bits (884), Expect = 6e-111, Method: Composition-based stats. Identities = 114/440 (26%), Positives = 186/440 (42%), Gaps = 71/440 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 + F + F LK L+ + +G E V + K D Sbjct 13 MEFTTSADVTVAPTFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSG 72 Query 272 SGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +G + + +AL++ P+RELA Q + + Y++ ++ IG Sbjct 73 TGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALGDYMN---VQCHACIG 129 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + + L+ G IV GTPGR+ D++ L ++ LVLDEAD LL++G+ + I Sbjct 130 GTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIY 189 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P T QV+V SATL +DV ++ K M P + +K ++ + + Sbjct 190 DVYRYLPPAT------QVVVVSATLP-YDVLDMTTKFMTDPVRILVKRDELTLEGLKQYF 242 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + V + + L Y I Sbjct 243 IAVEKEDWKF----------------------------------DTLCDLYDTLTIT--- 265 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QA+IFC T+ D L + F+ +HG+ ER ++ F++G+ Sbjct 266 --QAVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGEMPQKERDSIMQDFRQGN 314 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V +E + Sbjct 315 SRVLISTDVWARGIDVQQVSLVINYDLPVNRENYIHRIGRSGRFGRKGVAINFVTSEDVR 374 Query 626 VWYHVCSSRGKGCYNTRLKE 645 + + + Y+T++ E Sbjct 375 ILRDI-----ELYYSTQIDE 389 Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +M + + + + + P+ +Q+ +I I G D + A++G+GKT FSI ++Q Sbjct 26 TFQDMHLKENLLRGIYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGKTATFSISMLQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 ++ +++ Q T + Y A IG + R++ H Sbjct 86 VIDTAVRETQALVLSPTRELATQIQSVVMALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 145 Query 121 GCRATKGLMKG 131 T G + Sbjct 146 IVSGTPGRVAD 156 >sp|P41381|IF4A8_TOBAC Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 345 bits (885), Expect = 7e-111, Method: Composition-based stats. Identities = 115/486 (24%), Positives = 199/486 (41%), Gaps = 92/486 (19%) Query 167 FGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGL-------AFEIP 219 G + +Q+D+ + D + D+ + F G L FE P Sbjct 4 LAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKP 63 Query 220 PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ 279 ++ + + P C G + +A G K+ + + Q Sbjct 64 SAIQQRGIVPFC---------------------KGLDVIQQAQSG-TGKTATFCSGILQQ 101 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L G Sbjct 102 LDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVREDQRILAAG 158 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V ++VGTPGR+ D++ L +R VLDEAD +LS+G+ D I + +P Sbjct 159 VHVIVGTPGRVFDMLRRQSLRPDYLRMFVLDEADEMLSRGFKDQIYDIFQMLPT------ 212 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 ++QV V SAT+ + ++ K M+ P + +K ++ + + V V+ + +L Sbjct 213 KVQVGVFSATMPP-EALDITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKL---- 267 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 E + + Q++IF T+ Sbjct 268 -----------------------------------ETLCDLYETLAITQSVIFVNTRRKV 292 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L + + HGD + R + F+ G R LI TD+ ARGI Sbjct 293 DWLTDKM---------RTRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 343 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP + +NY+HRIGR GR R G+AI+ V T+ E++ + + + Y Sbjct 344 DVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDI-----QKFY 398 Query 640 NTRLKE 645 N ++E Sbjct 399 NVIIEE 404 Score = 80.6 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100 Query 63 IVYETLKDQQ 72 + L Q Sbjct 101 QLDYGLVQCQ 110 >sp|P35683|IF4A1_ORYSJ Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0701100 PE=2 SV=2 Length=414 Score = 345 bits (884), Expect = 1e-110, Method: Composition-based stats. Identities = 121/488 (25%), Positives = 203/488 (42%), Gaps = 93/488 (19%) Query 166 GFGGTGKKSHNKQFDNYGEEFT-MHDTIGCYLDIDKGHVKFSKNGKDLGL-------AFE 217 G G + K +D+ +E +T + D+ H F G L FE Sbjct 3 GMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFE 62 Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 P ++ + + P C G + +A G K+ + + Sbjct 63 KPSAIQQRGIVPFC---------------------KGLDVIQQAQSG-TGKTATFCSGIL 100 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L Sbjct 101 QQLDYAVVECQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVREDQRILA 157 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 +GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 158 SGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLP----- 212 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 ++QV V SAT+ + +++ K M+ P + +K ++ + + V V + +L Sbjct 213 -SKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKL-- 268 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y AI Q++IF T+ Sbjct 269 --------------------------------DTLCDLYETLAIT-----QSVIFVNTRR 291 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L +G + HGD + R + F+ G R LI TD+ AR Sbjct 292 KVDWLTDKM---------RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + + Sbjct 343 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI-----QR 397 Query 638 CYNTRLKE 645 YN ++E Sbjct 398 FYNVVIEE 405 Score = 82.1 bits (201), Expect = 3e-15, Method: Composition-based stats. Identities = 18/70 (26%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101 Query 63 IVYETLKDQQ 72 + + + Q Sbjct 102 QLDYAVVECQ 111 >sp|P41376|IF4A1_ARATH Eukaryotic initiation factor 4A-1 OS=Arabidopsis thaliana OX=3702 GN=EIF4A1 PE=1 SV=1 Length=412 Score = 344 bits (883), Expect = 1e-110, Method: Composition-based stats. Identities = 118/492 (24%), Positives = 200/492 (41%), Gaps = 103/492 (21%) Query 166 GFGGTGKKSHNKQFDNYGEEFTMH--DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMK 223 G G + +QFD E + Y D+ + Sbjct 3 GSAPEGTQFDARQFDQKLNEVLEGQDEFFTSYDDVHES---------------------- 40 Query 224 NQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ----- 276 F A L+ L+ + +G E+ + G V K D +++ SG + Sbjct 41 ----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATFC 94 Query 277 ---VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 + Q F +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ Sbjct 95 SGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVREDQ 151 Query 334 SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 +L+ GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 152 RILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLP- 210 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 ++QV V SAT+ + +++ K M P + +K ++ + + V V + Sbjct 211 -----PKIQVGVFSATMPP-EALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEW 264 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 +L E + + Q++IF Sbjct 265 KL---------------------------------------ETLCDLYETLAITQSVIFV 285 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 T+ D L + + HGD + R + F+ G R LI TD Sbjct 286 NTRRKVDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + ARGID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + Sbjct 337 LLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI--- 393 Query 634 RGKGCYNTRLKE 645 + YN ++E Sbjct 394 --QKFYNVVVEE 403 Score = 79.4 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 20/70 (29%), Positives = 34/70 (49%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99 Query 63 IVYETLKDQQ 72 + +L Q Sbjct 100 QLDFSLIQCQ 109 >sp|Q24731|DDX1_DROVI ATP-dependent RNA helicase Ddx1 (Fragment) OS=Drosophila virilis OX=7244 GN=Ddx1 PE=3 SV=1 Length=400 Score = 344 bits (882), Expect = 1e-110, Method: Composition-based stats. Identities = 223/378 (59%), Positives = 274/378 (72%), Gaps = 37/378 (10%) Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD LL QGY+D I R+H QIP++TSDG RLQ+IVCSATLH+F+VKK++E++MHFPTW Sbjct 2 DEADRLLKQGYTDLIERLHKQIPKITSDGCRLQMIVCSATLHAFEVKKMAERLMHFPTWG 61 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 DLKGED+VP+TVHHVV V+P TD W++L + I TD VH DN P SPE +S+A+ Sbjct 62 DLKGEDAVPETVHHVVCMVDPHTDSSWQQLRQP-IHTDGVHDHDNVHPTNQSPETFSQAV 120 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K+LKGEY +RAI +HKMD+AIIFCRTK DCDNLEQ+ Q+G G +FSCVCLHGDR Sbjct 121 KLLKGEYCIRAIDQHKMDRAIIFCRTKQDCDNLEQHLSQRG------GQRFSCVCLHGDR 174 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY------------------VINVT 591 KP ERKQNLE FK+ +V+FLICTDVAARG+DI G+P+ VIN+T Sbjct 175 KPQERKQNLEMFKRQEVKFLICTDVAARGLDITGLPFSKDLKYLSENTLNFPNLAVINIT 234 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH--VCSSRGKGCYNTRLKEDGGC 649 LPD+K NYVHRIGRVGR E MGLAISLV+T EKVWYH C +RG+ G Sbjct 235 LPDDKSNYVHRIGRVGRPESMGLAISLVSTVPEKVWYHGEWCKTRGR----------SGS 284 Query 650 TIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILA 709 IWYNE LL+E+E+HLN TI QV + VPV++FDGKV YGQK G Y+ HV+ L Sbjct 285 CIWYNEPNLLAEVEDHLNITIQQVVKSLDVPVNDFDGKVVYGQKNLNMGTGYEDHVEQLG 344 Query 710 PTVQELAALEKEAQTSFL 727 PTV++ LE ++Q+ FL Sbjct 345 PTVRKQTDLELQSQSLFL 362 >sp|Q40470|IF4A7_TOBAC Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 344 bits (883), Expect = 1e-110, Method: Composition-based stats. Identities = 116/493 (24%), Positives = 201/493 (41%), Gaps = 104/493 (21%) Query 166 GFGGTGKKSHNKQFDNYGEEFT---MHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHM 222 G G + +Q+D E + Y ++ Sbjct 3 GLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDS--------------------- 41 Query 223 KNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ---- 276 F A L+ L+ + +G E+ + G V K D +++ SG + Sbjct 42 -----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATF 94 Query 277 ----VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ Sbjct 95 CSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVRED 151 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 +L++GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 152 QRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP 211 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 ++QV V SAT+ + +++ K M+ P + +K +D + + V V+ + Sbjct 212 ------PKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDDVTLEGIKQFYVNVDKEE 264 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 +L E + + Q++IF Sbjct 265 WKL---------------------------------------ETLCDLYETLAITQSVIF 285 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 T+ D L + + HGD + R + F+ G R LI T Sbjct 286 VNTRRKVDWLTDKM---------RTRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+ ARGID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + Sbjct 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVIKDDERMLSDI-- 394 Query 633 SRGKGCYNTRLKE 645 + YN ++E Sbjct 395 ---QRFYNVVIEE 404 Score = 81.7 bits (200), Expect = 5e-15, Method: Composition-based stats. Identities = 20/70 (29%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 Query 63 IVYETLKDQQ 72 + +L + Q Sbjct 101 QLDYSLVECQ 110 >sp|Q40471|IF4A9_TOBAC Eukaryotic initiation factor 4A-9 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 344 bits (882), Expect = 2e-110, Method: Composition-based stats. Identities = 116/493 (24%), Positives = 202/493 (41%), Gaps = 104/493 (21%) Query 166 GFGGTGKKSHNKQFDNYGEEFTMH---DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHM 222 G G + +Q+D+ E D Y ++ Sbjct 3 GAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYHS--------------------- 41 Query 223 KNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ---- 276 F A LK L+ + +G E+ + G V K D +++ SG + Sbjct 42 -----FDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATF 94 Query 277 ----VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ Sbjct 95 CSGILQQLDYELLDCQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVRED 151 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 +L +GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 152 QRILSSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP 211 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 ++QV V SAT+ + +++ K M+ P + +K ++ + + V V+ + Sbjct 212 ------PKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEE 264 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 +L E + + Q++IF Sbjct 265 WKL---------------------------------------ETLCDLYETLAITQSVIF 285 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 T+ D L + + HGD + R + F+ G R LI T Sbjct 286 VNTRRKVDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+ ARGID+ V VIN LP + +NY+HRIGR GR R G++I+ V ++ E++ + Sbjct 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTSDDERMLSDI-- 394 Query 633 SRGKGCYNTRLKE 645 + YN ++E Sbjct 395 ---QRFYNVVIEE 404 Score = 83.6 bits (205), Expect = 1e-15, Method: Composition-based stats. Identities = 20/70 (29%), Positives = 34/70 (49%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 41 SFDAMGLKENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100 Query 63 IVYETLKDQQ 72 + L D Q Sbjct 101 QLDYELLDCQ 110 >sp|Q6Z2Z4|IF4A3_ORYSJ Eukaryotic initiation factor 4A-3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0146600 PE=1 SV=1 Length=414 Score = 344 bits (881), Expect = 3e-110, Method: Composition-based stats. Identities = 118/488 (24%), Positives = 200/488 (41%), Gaps = 93/488 (19%) Query 166 GFGGTGKKSHNKQFDNYGEEFT-MHDTIGCYLDIDKGHVKFSKNGKDLGL-------AFE 217 G G + K +D+ +E D + D+ F G L FE Sbjct 3 GMAPEGSQFDAKHYDSKMQELLHQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFE 62 Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 P ++ + + P C G + +A G K+ + + Sbjct 63 KPSAIQQRGIVPFC---------------------KGLDVIQQAQSG-TGKTATFCSGIL 100 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 Q + ++L++ P+RELA+Q ++ Y+ ++ +GG + R+ +L Sbjct 101 QQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVREDQRILA 157 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 +GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 158 SGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP----- 212 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 ++QV V SAT+ + +++ K M+ P + +K ++ + + V V + +L Sbjct 213 -PKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKL-- 268 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y AI Q++IF T+ Sbjct 269 --------------------------------DTLCDLYETLAIT-----QSVIFVNTRR 291 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + + HGD + R + F+ G R LI TD+ AR Sbjct 292 KVDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + + Sbjct 343 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI-----QR 397 Query 638 CYNTRLKE 645 YN ++E Sbjct 398 FYNVTIEE 405 Score = 82.5 bits (202), Expect = 2e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101 Query 63 IVYETLKDQQ 72 + L + Q Sbjct 102 QLDYGLVECQ 111 >sp|P41378|IF4A_WHEAT Eukaryotic initiation factor 4A OS=Triticum aestivum OX=4565 PE=2 SV=1 Length=414 Score = 343 bits (880), Expect = 5e-110, Method: Composition-based stats. Identities = 123/488 (25%), Positives = 202/488 (41%), Gaps = 93/488 (19%) Query 166 GFGGTGKKSHNKQFDNYGEEFT-MHDTIGCYLDIDKGHVKFSKNGKDLGL-------AFE 217 G G + K +D+ +E +T + D+ H F G L FE Sbjct 3 GMAPEGSQFDAKNYDSKMQELLSQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYGFE 62 Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 P ++ + + P C G + +A G K+ + + Sbjct 63 KPSAIQQRGIVPFC---------------------KGLDVIQQAQSG-TGKTATFCSGIL 100 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L Sbjct 101 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVREDQRILA 157 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 +GV +VVGTPGR+ D+V L ++ VLDEAD +LS+G+ D I + +P Sbjct 158 SGVHVVVGTPGRVFDIVRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLPG---- 213 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 ++QV V SAT+ + +++ K M+ P + +K ++ + + V V + +L Sbjct 214 --KIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKL-- 268 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y AI Q++IF T+ Sbjct 269 --------------------------------DTLCDLYETLAIT-----QSVIFVNTRR 291 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L +G + HGD + R + F+ G R LI TD+ AR Sbjct 292 KVDWLTDKM---------RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP + +NY HRIGR GR R G+AI+ V E E++ + + + Sbjct 343 GIDVQQVSLVINYDLPTQPENYQHRIGRSGRFGRKGVAINFVTREDERMLFDI-----QK 397 Query 638 CYNTRLKE 645 YN ++E Sbjct 398 FYNVVIEE 405 Score = 82.5 bits (202), Expect = 2e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101 Query 63 IVYETLKDQQ 72 + L + Q Sbjct 102 QLDYGLVECQ 111 >sp|Q40465|IF411_TOBAC Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=413 Score = 342 bits (878), Expect = 8e-110, Method: Composition-based stats. Identities = 114/487 (23%), Positives = 201/487 (41%), Gaps = 92/487 (19%) Query 166 GFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGL-------AFEI 218 G G + +Q+D E + + D+ + F G L FE Sbjct 3 GLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGFEK 62 Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 P ++ + + P C G + +A G K+ + + Sbjct 63 PSAIQQRGIVPFC---------------------KGLDVIQQAQSG-TGKTATFCSGILQ 100 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ +L++ Sbjct 101 QLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVREDQRILQS 157 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 158 GVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLP------ 211 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++QV V SAT+ + +++ K M+ P + +K ++ + + V V+ + +L Sbjct 212 PKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKL--- 267 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 E + + Q++IF T+ Sbjct 268 ------------------------------------ETLCDLYETLAITQSVIFVNTRRK 291 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L +G + HGD + R + F+ G R LI TD+ ARG Sbjct 292 VDWLTDKM---------RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP + +NY+HRIG GR R G++I+ V + E++ + + + Sbjct 343 IDVQQVSLVINYDLPTQPENYLHRIGHSGRFGRKGVSINFVTKDDERMLFDI-----QKF 397 Query 639 YNTRLKE 645 YN ++E Sbjct 398 YNVVIEE 404 Score = 82.1 bits (201), Expect = 3e-15, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F ++Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 100 Query 63 IVYETLKDQQ 72 + +L + Q Sbjct 101 QLDYSLVECQ 110 >sp|P41379|IF4A2_NICPL Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1 Length=413 Score = 342 bits (876), Expect = 2e-109, Method: Composition-based stats. Identities = 116/493 (24%), Positives = 202/493 (41%), Gaps = 104/493 (21%) Query 166 GFGGTGKKSHNKQFDNYGEEFT---MHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHM 222 G G + +QFD E + Y ++ Sbjct 3 GSAPEGSQFDARQFDAKMTELLGTEQEEFFTSYDEVYDS--------------------- 41 Query 223 KNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ---- 276 F A L+ L+ + +G E+ + G V K D +++ SG + Sbjct 42 -----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATF 94 Query 277 ----VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ Sbjct 95 CSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVRED 151 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 +L++GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 152 QRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP 211 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 ++QV V SAT+ + +++ K M+ P + +K ++ + + V V+ + Sbjct 212 ------PKIQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEE 264 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 +L E + + Q++IF Sbjct 265 WKL---------------------------------------ETLCDLYETLAITQSVIF 285 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 T+ D L + + HGD + R + F+ G R LI T Sbjct 286 VNTRRKVDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+ ARGID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + E++ + + Sbjct 337 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINSVTKDDERMLFDI-- 394 Query 633 SRGKGCYNTRLKE 645 + YN ++E Sbjct 395 ---QKFYNVVIEE 404 Score = 81.3 bits (199), Expect = 5e-15, Method: Composition-based stats. Identities = 20/70 (29%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 Query 63 IVYETLKDQQ 72 + +L + Q Sbjct 101 QLDYSLVECQ 110 >sp|Q10055|FAL1_SCHPO ATP-dependent RNA helicase fal1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tif412 PE=1 SV=1 Length=394 Score = 341 bits (874), Expect = 2e-109, Method: Composition-based stats. Identities = 112/442 (25%), Positives = 185/442 (42%), Gaps = 71/442 (16%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 + + + F LK L+ + +G E + + K D Sbjct 7 ENVELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQ 66 Query 270 QHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 +G L +ALI+ P+RELA Q N + +++ ++ Sbjct 67 SGTGKTATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMN---VQCHAC 123 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 IGG + + + L+ G +V GTPGR+ D++ L V+ L+LDEAD LL+QG+ + Sbjct 124 IGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQ 183 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 I ++ +P T QV+V SATL DV +++ K P + +K ++ + + Sbjct 184 IYDIYRYLPPGT------QVVVVSATLP-QDVLEMTNKFTTNPVRILVKRDELTLEGLKQ 236 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + V + + L Y I Sbjct 237 YFIAVEKEEWKF----------------------------------DTLCDLYDTLTIT- 261 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 QA+IFC ++ D L + + F+ +HG+ ER ++ F++ Sbjct 262 ----QAVIFCNSRRKVDWLTEKMREA---------NFTVTSMHGEMPQKERDAIMQDFRQ 308 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G+ R LICTD+ ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E Sbjct 309 GNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNED 368 Query 624 EKVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T + E Sbjct 369 VRILRDI-----EQYYSTVIDE 385 Score = 99.4 bits (246), Expect = 6e-21, Method: Composition-based stats. Identities = 28/134 (21%), Positives = 55/134 (41%), Gaps = 4/134 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F EM + ++ + + + P+ +Q+ +I I G DV+ A++G+GKT FSI + Sbjct 20 VSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGI 79 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW- 119 +Q + +++D Q T + + A G + K Sbjct 80 LQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHAC-IGGTSVGNDIKKLDY 138 Query 120 --HGCRATKGLMKG 131 H T G + Sbjct 139 GQHVVSGTPGRVTD 152 >sp|P0CQ72|FAL1_CRYNJ ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=FAL1 PE=3 SV=1 Length=396 Score = 340 bits (871), Expect = 6e-109, Method: Composition-based stats. Identities = 115/446 (26%), Positives = 187/446 (42%), Gaps = 71/446 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGY 265 N D L FE + F A LK L+ + + E+ + + + + D Sbjct 5 NVGDDKLVFESSEAVTVAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVI 64 Query 266 IVKSQHSGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 +G + + +AL++ P+RELA Q + Y++ + Sbjct 65 AQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMN---VS 121 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG 379 IGG + + + LE G +V GTPGR+ D++ L ++ L+LDE+D LL++G Sbjct 122 CHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNKG 181 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + D I ++ +P T QV+V SATL DV +++ K M P + +K ++ + Sbjct 182 FKDQIYDIYRYLPPAT------QVVVVSATLP-HDVLEMTTKFMTDPVRILVKRDELTLE 234 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + V V + + L Y Sbjct 235 GIKQFFVAVEKEDWKF----------------------------------DTLCDLYDTL 260 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I QA+IFC T+ D L + + F+ +HG+ ER + Sbjct 261 TIT-----QAVIFCNTRRKVDWLTEKMREA---------NFTVSSMHGEMVQKERDAIMA 306 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 F+ G R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V Sbjct 307 EFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKGVAINFV 366 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKE 645 + ++ + + Y+T++ E Sbjct 367 TVDDVRILRDI-----EQYYSTQIDE 387 Score = 99.0 bits (245), Expect = 7e-21, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 1/125 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ + + ++ P+ IQ +I I+ G DV+ A++G+GKT FSI ++Q Sbjct 24 TFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQ 83 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 + L++ Q T + Y S A G K G Sbjct 84 SIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNVSCHAC-IGGTSVGEDIRKLEAGQ 142 Query 123 RATKG 127 + G Sbjct 143 QVVSG 147 >sp|P0CQ73|FAL1_CRYNB ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=FAL1 PE=3 SV=1 Length=396 Score = 340 bits (871), Expect = 6e-109, Method: Composition-based stats. Identities = 115/446 (26%), Positives = 187/446 (42%), Gaps = 71/446 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGY 265 N D L FE + F A LK L+ + + E+ + + + + D Sbjct 5 NVGDDKLVFESSEAVTVAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVI 64 Query 266 IVKSQHSGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 +G + + +AL++ P+RELA Q + Y++ + Sbjct 65 AQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMN---VS 121 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG 379 IGG + + + LE G +V GTPGR+ D++ L ++ L+LDE+D LL++G Sbjct 122 CHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNKG 181 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + D I ++ +P T QV+V SATL DV +++ K M P + +K ++ + Sbjct 182 FKDQIYDIYRYLPPAT------QVVVVSATLP-HDVLEMTTKFMTDPVRILVKRDELTLE 234 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + V V + + L Y Sbjct 235 GIKQFFVAVEKEDWKF----------------------------------DTLCDLYDTL 260 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I QA+IFC T+ D L + + F+ +HG+ ER + Sbjct 261 TIT-----QAVIFCNTRRKVDWLTEKMREA---------NFTVSSMHGEMVQKERDAIMA 306 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 F+ G R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V Sbjct 307 EFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKGVAINFV 366 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKE 645 + ++ + + Y+T++ E Sbjct 367 TVDDVRILRDI-----EQYYSTQIDE 387 Score = 99.0 bits (245), Expect = 7e-21, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 1/125 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ + + ++ P+ IQ +I I+ G DV+ A++G+GKT FSI ++Q Sbjct 24 TFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIIRGRDVIAQAQSGTGKTATFSISMLQ 83 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 + L++ Q T + Y S A G K G Sbjct 84 SIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNVSCHAC-IGGTSVGEDIRKLEAGQ 142 Query 123 RATKG 127 + G Sbjct 143 QVVSG 147 >sp|Q9VHS8|IF4A3_DROME Eukaryotic initiation factor 4A-III OS=Drosophila melanogaster OX=7227 GN=CG7483 PE=1 SV=1 Length=399 Score = 339 bits (870), Expect = 9e-109, Method: Composition-based stats. Identities = 113/441 (26%), Positives = 185/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE ++ F A LK L+ + +G E+ + + K D Sbjct 13 NVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQS 72 Query 271 HSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G L + L + P+RELA Q I D ++ + I Sbjct 73 GTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALG---DMMNVQCHVCI 129 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G IV GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 130 GGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQI 189 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV++ SATL ++ +++ K M P + +K ++ + + Sbjct 190 YDVYRYLPPAT------QVVLISATLP-HEILEMTSKFMTDPIRILVKRDELTLEGIKQF 242 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 243 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 266 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER + ++ F+ G Sbjct 267 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERDEIMKEFRAG 314 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARGID+ V VIN LP+ ++ Y+HRIGR GR R G+AI+ V ++ Sbjct 315 QSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDI 374 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 375 RILRDI-----EQYYSTQIDE 390 Score = 99.4 bits (246), Expect = 5e-21, Method: Composition-based stats. Identities = 32/130 (25%), Positives = 53/130 (41%), Gaps = 2/130 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ M + E+ + + + P+ IQ SI I+ G DV+ A++G+GKT FSI + Sbjct 25 IPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISI 84 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS-AFAIGSDGLCCQSREV-KE 118 +Q + TL++ Q T + IG L R++ Sbjct 85 LQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGEDIRKLDYG 144 Query 119 WHGCRATKGL 128 H T G Sbjct 145 QHIVSGTPGR 154 >sp|Q91VC3|IF4A3_MOUSE Eukaryotic initiation factor 4A-III OS=Mus musculus OX=10090 GN=Eif4a3 PE=1 SV=3 Length=411 Score = 339 bits (868), Expect = 2e-108, Method: Composition-based stats. Identities = 109/441 (25%), Positives = 185/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84 Query 271 HSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G L +ALI+ P+RELA Q + Y++ ++ I Sbjct 85 GTGKTATFSVSVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN---VQCHACI 141 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 142 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 201 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV++ SATL ++ +++ K M P + +K ++ + + Sbjct 202 YDVYRYLPPAT------QVVLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 254 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 255 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 278 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 279 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 326 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 387 RILRDI-----EQYYSTQIDE 402 Score = 96.0 bits (237), Expect = 8e-20, Method: Composition-based stats. Identities = 29/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FS+ V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQ 98 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T + Y A IG + R++ H Sbjct 99 CLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 158 Query 121 GCRATKGL 128 T G Sbjct 159 VVAGTPGR 166 >sp|Q3B8Q2|IF4A3_RAT Eukaryotic initiation factor 4A-III OS=Rattus norvegicus OX=10116 GN=Eif4a3 PE=1 SV=1 Length=411 Score = 338 bits (867), Expect = 3e-108, Method: Composition-based stats. Identities = 109/441 (25%), Positives = 185/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84 Query 271 HSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G L +ALI+ P+RELA Q + Y++ ++ I Sbjct 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN---VQCHACI 141 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 142 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 201 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV++ SATL ++ +++ K M P + +K ++ + + Sbjct 202 YDVYRYLPPAT------QVVLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 254 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 255 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 278 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 279 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 326 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 387 RILRDI-----EQYYSTQIDE 402 Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T + Y A IG + R++ H Sbjct 99 CLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 158 Query 121 GCRATKGL 128 T G Sbjct 159 VVAGTPGR 166 >sp|A6M931|IF4A3_PIG Eukaryotic initiation factor 4A-III OS=Sus scrofa OX=9823 GN=EIF4A3 PE=2 SV=1 Length=411 Score = 338 bits (867), Expect = 3e-108, Method: Composition-based stats. Identities = 109/441 (25%), Positives = 185/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84 Query 271 HSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G L +ALI+ P+RELA Q + Y++ ++ I Sbjct 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN---VQCHACI 141 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 142 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 201 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV++ SATL ++ +++ K M P + +K ++ + + Sbjct 202 YDVYRYLPPAT------QVVLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 254 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 255 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 278 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 279 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 326 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 387 RILRDI-----EQYYSTQIDE 402 Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T + Y A IG + R++ H Sbjct 99 CLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 158 Query 121 GCRATKGL 128 T G Sbjct 159 VVAGTPGR 166 >sp|Q2NL22|IF4A3_BOVIN Eukaryotic initiation factor 4A-III OS=Bos taurus OX=9913 GN=EIF4A3 PE=2 SV=3 Length=411 Score = 338 bits (867), Expect = 3e-108, Method: Composition-based stats. Identities = 109/441 (25%), Positives = 185/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84 Query 271 HSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G L +ALI+ P+RELA Q + Y++ ++ I Sbjct 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN---VQCHACI 141 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 142 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 201 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV++ SATL ++ +++ K M P + +K ++ + + Sbjct 202 YDVYRYLPPAT------QVVLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 254 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 255 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 278 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 279 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 326 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 387 RILRDI-----EQYYSTQIDE 402 Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T + Y A IG + R++ H Sbjct 99 CLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 158 Query 121 GCRATKGL 128 T G Sbjct 159 VVAGTPGR 166 >sp|P38919|IF4A3_HUMAN Eukaryotic initiation factor 4A-III OS=Homo sapiens OX=9606 GN=EIF4A3 PE=1 SV=4 Length=411 Score = 338 bits (867), Expect = 4e-108, Method: Composition-based stats. Identities = 109/441 (25%), Positives = 185/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84 Query 271 HSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G L +ALI+ P+RELA Q + Y++ ++ I Sbjct 85 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN---VQCHACI 141 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 142 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 201 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV++ SATL ++ +++ K M P + +K ++ + + Sbjct 202 YDVYRYLPPAT------QVVLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 254 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 255 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 278 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 279 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 326 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 387 RILRDI-----EQYYSTQIDE 402 Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T + Y A IG + R++ H Sbjct 99 CLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 158 Query 121 GCRATKGL 128 T G Sbjct 159 VVAGTPGR 166 >sp|B5FZY7|IF4A3_TAEGU Eukaryotic initiation factor 4A-III OS=Taeniopygia guttata OX=59729 GN=EIF4A3 PE=2 SV=1 Length=410 Score = 338 bits (866), Expect = 6e-108, Method: Composition-based stats. Identities = 109/441 (25%), Positives = 185/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 24 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 83 Query 271 HSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G L +ALI+ P+RELA Q + Y++ ++ I Sbjct 84 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN---VQCHACI 140 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 141 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 200 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV++ SATL ++ +++ K M P + +K ++ + + Sbjct 201 YDVYRYLPPAT------QVVLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 253 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 254 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 277 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 278 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 325 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 326 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 385 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 386 RILRDI-----EQYYSTQIDE 401 Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 38 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 97 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T + Y A IG + R++ H Sbjct 98 CLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 157 Query 121 GCRATKGL 128 T G Sbjct 158 VVAGTPGR 165 >sp|Q5ZM36|IF4A3_CHICK Eukaryotic initiation factor 4A-III OS=Gallus gallus OX=9031 GN=EIF4A3 PE=2 SV=1 Length=412 Score = 337 bits (865), Expect = 6e-108, Method: Composition-based stats. Identities = 109/441 (25%), Positives = 185/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 26 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 85 Query 271 HSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G L +ALI+ P+RELA Q + Y++ ++ I Sbjct 86 GTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMN---VQCHACI 142 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 143 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 202 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV++ SATL ++ +++ K M P + +K ++ + + Sbjct 203 YDVYRYLPPAT------QVVLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 255 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 256 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 279 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 280 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 327 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 328 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 387 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 388 RILRDI-----EQYYSTQIDE 403 Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 40 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 99 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T + Y A IG + R++ H Sbjct 100 CLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 159 Query 121 GCRATKGL 128 T G Sbjct 160 VVAGTPGR 167 >sp|Q9CAI7|IF4A3_ARATH Eukaryotic initiation factor 4A-3 OS=Arabidopsis thaliana OX=3702 GN=TIF4A-3 PE=1 SV=1 Length=414 Score = 337 bits (863), Expect = 2e-107, Method: Composition-based stats. Identities = 118/490 (24%), Positives = 202/490 (41%), Gaps = 97/490 (20%) Query 166 GFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ 225 G G + +QFD +G F N + + Sbjct 3 GMASDGTQYDPRQFDTKMNAILGE----------EGEETFYTN------------YDEVC 40 Query 226 ALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ------- 276 F A L+ L+ + +G E+ + G + K D +++ SG + Sbjct 41 DSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLD--VIQQAQSGTGKTATFCSG 98 Query 277 -VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + Q +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ V Sbjct 99 VLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLG---VKAQACVGGTSVREDQRV 155 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L++GV +VVGTPGR+ DL+ L ++ VLDEAD +LS+G+ D I + +P Sbjct 156 LQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLP--- 212 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 ++QV V SAT+ + +++ K M+ P + +K ++ + + V V+ + +L Sbjct 213 ---SKVQVGVFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKL 268 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 E + + Q++IF T Sbjct 269 ---------------------------------------ETLCDLYETLAITQSVIFVNT 289 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + D L + + HGD + R + F+ G R LI TD+ Sbjct 290 RRKVDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 340 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 ARGID+ V VIN LP + +NY+HRIGR GR R G+AI+ + +E E++ + Sbjct 341 ARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADI----- 395 Query 636 KGCYNTRLKE 645 + YN ++E Sbjct 396 QRFYNVVVEE 405 Score = 78.6 bits (192), Expect = 4e-14, Method: Composition-based stats. Identities = 20/70 (29%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + P++ + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 42 SFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQ 101 Query 63 IVYETLKDQQ 72 + +L Q Sbjct 102 QLDISLVQCQ 111 >sp|P27639|IF4A_CAEEL Eukaryotic initiation factor 4A OS=Caenorhabditis elegans OX=6239 GN=inf-1 PE=2 SV=1 Length=402 Score = 336 bits (861), Expect = 2e-107, Method: Composition-based stats. Identities = 119/430 (28%), Positives = 190/430 (44%), Gaps = 71/430 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F LK L+ + FG E+ K V + D +G + + + Sbjct 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +AL++ P+RELA+Q + +Y++ + L IGG + RD LE G Sbjct 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN---VNILPCIGGTSVRDDQRKLEAG 147 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 + +VVGTPGR+ D+++ L+ S+++ VLDEAD +LS+G+ D I + +PQ Sbjct 148 IHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQ------ 201 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 +QV++ SAT+ S +V ++ + M P + +K ++ + + + V + Sbjct 202 DVQVVLLSATMPS-EVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKF---- 256 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y V + QA+IFC T+ Sbjct 257 ------------------------------DCLCDLYNVVNVT-----QAVIFCNTRRKV 281 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L + + +QF+ CLHGD ER + F+ G R LI TD+ ARGI Sbjct 282 DTLTEKMTE---------NQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGI 332 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + + S Y Sbjct 333 DVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIES-----YY 387 Query 640 NTRLKEDGGC 649 T+++E Sbjct 388 TTQIEEMPES 397 Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 2/133 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + E+ + + + P+ IQ +I G DV+ A++G+GKT FS+ + Sbjct 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREVKE- 118 +Q + Q T + Y + IG + R+++ Sbjct 88 LQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAG 147 Query 119 WHGCRATKGLMKG 131 H T G + Sbjct 148 IHVVVGTPGRVGD 160 >sp|B7ZTW1|IF4A3_XENTR Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis OX=8364 GN=eif4a3 PE=2 SV=1 Length=415 Score = 336 bits (862), Expect = 2e-107, Method: Composition-based stats. Identities = 108/441 (24%), Positives = 184/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 29 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 88 Query 271 HSGNAQ------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G + +ALI+ P+RELA Q + Y++ ++ I Sbjct 89 GTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMN---VQCHACI 145 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 146 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 205 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV + SATL ++ +++ K M P + +K ++ + + Sbjct 206 YDVYRYLPPAT------QVCLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 258 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 259 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 282 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 283 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 330 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 331 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 390 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 391 RILRDI-----EQYYSTQIDE 406 Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats. Identities = 29/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT F + V+Q Sbjct 43 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 102 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T G + Y A IG + R++ H Sbjct 103 CLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 162 Query 121 GCRATKGL 128 T G Sbjct 163 VVAGTPGR 170 >sp|B5DG42|IF4A3_SALSA Eukaryotic initiation factor 4A-III OS=Salmo salar OX=8030 GN=eif4a3 PE=2 SV=1 Length=406 Score = 335 bits (860), Expect = 3e-107, Method: Composition-based stats. Identities = 108/441 (24%), Positives = 184/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 20 KIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 79 Query 271 HSGNAQ------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G + +ALI+ P+RELA Q + Y++ ++ I Sbjct 80 GTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMN---VQCHSCI 136 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 137 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 196 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV + SATL ++ +++ K M P + +K ++ + + Sbjct 197 YDVYRYLPPAT------QVCLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 249 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 250 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 273 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 274 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 321 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 322 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 381 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 382 RILRDI-----EQYYSTQIDE 397 Score = 96.4 bits (238), Expect = 6e-20, Method: Composition-based stats. Identities = 28/128 (22%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT F + V+Q Sbjct 34 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 93 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T G + Y + IG + R++ H Sbjct 94 CLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQH 153 Query 121 GCRATKGL 128 T G Sbjct 154 VVAGTPGR 161 >sp|Q7ZVA6|IF4A3_DANRE Eukaryotic initiation factor 4A-III OS=Danio rerio OX=7955 GN=eif4a3 PE=2 SV=1 Length=406 Score = 335 bits (860), Expect = 4e-107, Method: Composition-based stats. Identities = 108/441 (24%), Positives = 184/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 20 KIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 79 Query 271 HSGNAQ------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G + +ALI+ P+RELA Q + Y++ ++ I Sbjct 80 GTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMN---VQCHACI 136 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 137 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 196 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV + SATL ++ +++ K M P + +K ++ + + Sbjct 197 YDVYRYLPPAT------QVCLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 249 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 250 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 273 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 274 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 321 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 322 ASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 381 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 382 RILRDI-----EQYYSTQIDE 397 Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats. Identities = 29/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT F + V+Q Sbjct 34 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 93 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T G + Y A IG + R++ H Sbjct 94 CLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 153 Query 121 GCRATKGL 128 T G Sbjct 154 VVAGTPGR 161 >sp|Q4R3Q1|IF4A3_MACFA Eukaryotic initiation factor 4A-III OS=Macaca fascicularis OX=9541 GN=EIF4A3 PE=2 SV=3 Length=411 Score = 334 bits (857), Expect = 1e-106, Method: Composition-based stats. Identities = 109/441 (25%), Positives = 185/441 (42%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 25 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 84 Query 271 HSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G L +ALI+ P+RELA Q + Y++ ++ I Sbjct 85 GTGKTATFSISVLQCLDIQVRETQALILAPARELAVQIQKGLLTLGDYMN---VQCHACI 141 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 142 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 201 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV++ SATL ++ +++ K M P + +K ++ + + Sbjct 202 YDVYRYLPPAT------QVVLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 254 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 255 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 278 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 279 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 326 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + Sbjct 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 387 RILRDI-----EQYYSTQIDE 402 Score = 96.0 bits (237), Expect = 9e-20, Method: Composition-based stats. Identities = 29/128 (23%), Positives = 52/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT FSI V+Q Sbjct 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q + Y A IG + R++ H Sbjct 99 CLDIQVRETQALILAPARELAVQIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQH 158 Query 121 GCRATKGL 128 T G Sbjct 159 VVAGTPGR 166 >sp|Q10I26|IF43B_ORYSJ Eukaryotic initiation factor 4A-III homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=EIF4A3B PE=1 SV=1 Length=404 Score = 334 bits (856), Expect = 1e-106, Method: Composition-based stats. Identities = 115/443 (26%), Positives = 190/443 (43%), Gaps = 71/443 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D L FE P ++ + F ++ L+ + +G E+ + + + D Sbjct 16 DENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQA 75 Query 269 SQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G + +ALI+ P+RELA QT + YI+ ++ Sbjct 76 QSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYIN---IQVHA 132 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + + LE+GV +V GTPGR+ D++ L ++ L+LDEAD +L +G+ D Sbjct 133 CIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKD 192 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P LQV + SATL ++ +++ K M P + +K ++ + + Sbjct 193 QIYDVYRYLP------PELQVCLISATLP-HEILEMTSKFMTDPVRILVKRDELTLEGIK 245 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V V + + L Y I Sbjct 246 QFFVAVEKEEWKF----------------------------------DTLCDLYDTLTIT 271 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC TK D L + + + F+ +HGD ER + F+ Sbjct 272 -----QAVIFCNTKRKVDWLTERM---------RSNNFTVSAMHGDMPQKERDAIMGEFR 317 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R LI TDV ARG+D+ V VIN LP+ ++ Y+HRIGR GR R G+AI+ V E Sbjct 318 SGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKE 377 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 378 DIRILRDI-----EQYYSTQIDE 395 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 56/141 (40%), Gaps = 2/141 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F +MG+ ++ + + + P+ IQ ++ I+ G DV+ A++G+GKT S+ V Sbjct 30 ISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSV 89 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 QIV +++ Q T + + Y A G K H Sbjct 90 CQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHAC-IGGKSIGEDIRKLEH 148 Query 121 GCRATKGLMKGKHYYEVSCHD 141 G G G+ + Sbjct 149 GVHVVSG-TPGRVCDMIKRRT 168 >sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP2 PE=3 SV=1 Length=544 Score = 339 bits (868), Expect = 1e-106, Method: Composition-based stats. Identities = 108/426 (25%), Positives = 177/426 (42%), Gaps = 67/426 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K + ++ V ++ G + G + Sbjct 121 VLKEVKAEGFDKPTSIQCQGWPMALS--------GRDMVGIAATGSGKTLSYCLPGIVHI 172 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q +F K + ++R + GGV Q+ Sbjct 173 NAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGK---SSRIRNTCVYGGVPRGQQIRE 229 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L G +IV+ TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 230 LIRGAEIVIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI---- 285 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +V++L+ ++ P V + E + + +V Sbjct 286 --RPDRQTLMWSATWPK-EVQQLARDYLNDPIQVQIGSLELAASHNITQLV--------- 333 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ SE K + + + K + +IF Sbjct 334 ----------------------------EVVSEFEKRDRLVKHLDTASQDKESKILIFAS 365 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK CD + Y Q G + + +HGD+ ER L F+ G+ ++ TDV Sbjct 366 TKRTCDEITSYLRQDG---------WPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDV 416 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARGID+ G+ +V+N +P ++YVHRIGR GRA G AIS + + + + S Sbjct 417 AARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIM 476 Query 635 GKGCYN 640 + N Sbjct 477 REAKQN 482 Score = 98.3 bits (243), Expect = 4e-20, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 109 ITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 168 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 169 IVHI----NAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGKSS 210 >sp|P41377|IF4A2_ARATH Eukaryotic initiation factor 4A-2 OS=Arabidopsis thaliana OX=3702 GN=TIF4A-2 PE=1 SV=1 Length=412 Score = 334 bits (856), Expect = 1e-106, Method: Composition-based stats. Identities = 115/492 (23%), Positives = 199/492 (40%), Gaps = 103/492 (21%) Query 166 GFGGTGKKSHNKQFDNYGEEFTMH--DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMK 223 G G + +QFD E + Y ++ + Sbjct 3 GSAPEGTQFDTRQFDQRLNEVLDGQDEFFTSYDEVHES---------------------- 40 Query 224 NQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ----- 276 F A L+ L+ + +G E+ + G V K D +++ SG + Sbjct 41 ----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATFC 94 Query 277 ---VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 + Q + +AL++ P+RELA+Q ++ Y ++ +GG + R+ Sbjct 95 SGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALGDY---QGVKVHACVGGTSVREDQ 151 Query 334 SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 +L+ GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 152 RILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLP- 210 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 ++QV V SAT+ + +++ K M P + +K ++ + + V V + Sbjct 211 -----PKIQVGVFSATMPP-EALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDW 264 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 +L E + + Q++IF Sbjct 265 KL---------------------------------------ETLCDLYETLAITQSVIFV 285 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 T+ D L + + HGD + R + F+ G R LI TD Sbjct 286 NTRRKVDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + ARGID+ V VIN LP + +NY+HRIGR GR R G+AI+ V + +++ + + Sbjct 337 LLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDI--- 393 Query 634 RGKGCYNTRLKE 645 + YN ++E Sbjct 394 --QKFYNVVVEE 403 Score = 80.6 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 20/70 (29%), Positives = 33/70 (47%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 40 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 99 Query 63 IVYETLKDQQ 72 + L Q Sbjct 100 QLDYALLQCQ 109 >sp|Q6C347|FAL1_YARLI ATP-dependent RNA helicase FAL1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=FAL1 PE=3 SV=1 Length=397 Score = 334 bits (855), Expect = 2e-106, Method: Composition-based stats. Identities = 115/448 (26%), Positives = 183/448 (41%), Gaps = 71/448 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D L F+ + F + LK+ L+ + +G E + K D Sbjct 9 DDELEFKTSKDVDVTPTFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQA 68 Query 269 SQHSGN------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G + + +A+++ P+RELA Q + I Y++ ++ Sbjct 69 QSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMN---VQCHA 125 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + LE G +V GTPGR D++ G L ++ L+LDEAD LL++G+ + Sbjct 126 CIGGTSLSVDMKKLEAGQQVVSGTPGRCLDMIKKGCLRTKNLKMLILDEADELLNKGFQE 185 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P T QV+V SATL V +++ K M P + +K ++ + + Sbjct 186 QIYDIYRYLPAAT------QVVVVSATLP-HSVLEMTSKFMTDPVRILVKRDELTLEGLK 238 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V + + L Y I Sbjct 239 QYFIAVEQEEWKF----------------------------------DTLCDLYDTLTIT 264 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC TK D L Q K + F+ +HGD +R + F+ Sbjct 265 -----QAVIFCNTKKKVDWLTQQM---------KDNNFTVCSMHGDMAQKDRDSIMNEFR 310 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ + Sbjct 311 SGRSRVLISTDVWARGIDVQQVSLVINYDLPPNRENYIHRIGRSGRFGRKGVAINFATND 370 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 + + Y+T++ E Sbjct 371 DITTLRDI-----EQYYSTQIDEMPVNV 393 Score = 95.2 bits (235), Expect = 2e-19, Method: Composition-based stats. Identities = 24/117 (21%), Positives = 50/117 (43%), Gaps = 1/117 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + ++ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI +++ Sbjct 25 TFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIKGRDTIAQAQSGTGKTATFSISMLE 84 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREVKE 118 ++ ++ Q T + Y A IG L ++++ Sbjct 85 VIDTKHRETQAMVLSPTRELATQIQSVILALGDYMNVQCHACIGGTSLSVDMKKLEA 141 >sp|Q5U526|I4A3A_XENLA Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis OX=8355 GN=eif4a3-a PE=2 SV=1 Length=415 Score = 334 bits (855), Expect = 2e-106, Method: Composition-based stats. Identities = 107/441 (24%), Positives = 183/441 (41%), Gaps = 71/441 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 + FE + F L+ L+ + +G E+ + + K D Sbjct 29 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQS 88 Query 271 HSGNAQ------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +G + +ALI+ P+RELA Q + Y++ ++ I Sbjct 89 GTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMN---VQCHACI 145 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 146 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 205 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ +P T QV + SATL ++ +++ K M P + +K ++ + + Sbjct 206 YDVYRYLPPAT------QVCLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQF 258 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + + L Y I Sbjct 259 FVAVEREEWKF----------------------------------DTLCDLYDTLTIT-- 282 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 283 ---QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSG 330 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR G+AI+ V + Sbjct 331 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGGKGVAINFVKNDDI 390 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 391 RILRDI-----EQYYSTQIDE 406 Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats. Identities = 29/128 (23%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ +I I+ G DV+ +++G+GKT F + V+Q Sbjct 43 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 102 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T G + Y A IG + R++ H Sbjct 103 CLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 162 Query 121 GCRATKGL 128 T G Sbjct 163 VVAGTPGR 170 >sp|O42226|I4A3B_XENLA Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis OX=8355 GN=eif4a3-b PE=2 SV=1 Length=414 Score = 334 bits (855), Expect = 3e-106, Method: Composition-based stats. Identities = 106/440 (24%), Positives = 184/440 (42%), Gaps = 71/440 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 + F+ + F L+ L+ + +G E+ + + K D Sbjct 29 VEFQTSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQKAIKQIIKGRDVIAQSQSG 88 Query 272 SGNAQ------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +G + +ALI+ P++ELA Q + Y++ ++ IG Sbjct 89 TGKTATFCVSVLQCLDIQIRETQALILAPTKELARQIQKVLLALGDYMN---VQCHACIG 145 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + + L+ G +V GTPGR+ D++ L ++ LVLDEAD +L++G+ + I Sbjct 146 GTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIY 205 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P T QV + SATL ++ +++ K M P + +K ++ + + Sbjct 206 DVYRYLPPAT------QVCLISATLP-HEILEMTNKFMTDPIRILVKRDELTLEGIKQFF 258 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V V + + L Y I Sbjct 259 VAVEREEWKF----------------------------------DTLCDLYDTLTIT--- 281 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QA+IFC TK D L + + F+ +HGD ER+ ++ F+ G Sbjct 282 --QAVIFCNTKRKVDWLTEKMREA---------NFTVSSMHGDMPQKERESIMKEFRSGA 330 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 R LI TDV ARG+D+ V +IN LP+ ++ Y+HRIGR GR R G+AI+ V + + Sbjct 331 SRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIR 390 Query 626 VWYHVCSSRGKGCYNTRLKE 645 + + + Y+T++ E Sbjct 391 ILRDI-----EQYYSTQIDE 405 Score = 95.2 bits (235), Expect = 2e-19, Method: Composition-based stats. Identities = 28/128 (22%), Positives = 53/128 (41%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ ++ + + + P+ IQ ++I I+ G DV+ +++G+GKT F + V+Q Sbjct 42 TFDTMGLREDLLRGIYAYGFEKPSAIQQKAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQ 101 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREV-KEWH 120 + +++ Q T + Y A IG + R++ H Sbjct 102 CLDIQIRETQALILAPTKELARQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 161 Query 121 GCRATKGL 128 T G Sbjct 162 VVAGTPGR 169 >sp|Q5VNM3|IF43A_ORYSJ Eukaryotic initiation factor 4A-III homolog A OS=Oryza sativa subsp. japonica OX=39947 GN=EIF4A3A PE=1 SV=1 Length=404 Score = 333 bits (853), Expect = 3e-106, Method: Composition-based stats. Identities = 114/443 (26%), Positives = 191/443 (43%), Gaps = 71/443 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D L FE P ++ + F +++ L+ + +G E+ + + + D Sbjct 16 DENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQA 75 Query 269 SQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G + +ALI+ P+RELA QT + +I+ ++ Sbjct 76 QSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFIN---IQVHA 132 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + + LE+GV +V GTPGR+ D++ L ++ L+LDEAD +L +G+ D Sbjct 133 CIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKD 192 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P LQV + SATL ++ +++ K M P + +K ++ + + Sbjct 193 QIYDVYRYLP------PELQVCLISATLP-HEILEMTSKFMTDPVRILVKRDELTLEGIK 245 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V V + + L Y I Sbjct 246 QFFVAVEKEEWKF----------------------------------DTLCDLYDTLTIT 271 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC TK D L + + + F+ +HGD ER + F+ Sbjct 272 -----QAVIFCNTKRKVDWLTERM---------RSNNFTVSAMHGDMPQKERDAIMGEFR 317 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R LI TDV ARG+D+ V VIN LP+ ++ Y+HRIGR GR R G+AI+ V E Sbjct 318 SGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKE 377 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 ++ + + Y+T++ E Sbjct 378 DIRILRDI-----EQYYSTQIDE 395 Score = 91.0 bits (224), Expect = 4e-18, Method: Composition-based stats. Identities = 29/141 (21%), Positives = 56/141 (40%), Gaps = 2/141 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F +MG+ ++ + + + P+ IQ ++ I+ G DV+ A++G+GKT S+ V Sbjct 30 ISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSV 89 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 QIV +++ Q T + + + A G K H Sbjct 90 CQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHAC-IGGKSIGEDIRKLEH 148 Query 121 GCRATKGLMKGKHYYEVSCHD 141 G G G+ + Sbjct 149 GVHVVSG-TPGRVCDMIKRRT 168 >sp|A5DIP0|DHH1_PICGU ATP-dependent RNA helicase DHH1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DHH1 PE=3 SV=1 Length=547 Score = 337 bits (865), Expect = 4e-106, Method: Composition-based stats. Identities = 123/520 (24%), Positives = 202/520 (39%), Gaps = 95/520 (18%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ ++ GL E+ + ++ + G L++A +G Sbjct 29 KSFEEFGLKRELLMGIFEAGFEKPSPIQEESIPMAL----------AGRDILARAKNG-T 77 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 K+ + Q K N + LI+ P+RELA QT +K K++ KL+ ++ GG Sbjct 78 GKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKHL---KLQCMVTTGG 134 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 RD + L+ V I+VGTPGR+ DL + + S+ V+DEAD +LS+ + I + Sbjct 135 TLLRDDVMRLDEPVHILVGTPGRVLDLAARSIADFSECPMFVMDEADKMLSREFKGIIEQ 194 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + P K Q ++ SAT VK +K ++ P ++L ++ + Sbjct 195 ILEFFP------KNRQSLLFSATFP-LAVKSFMDKHLNKPYEINLM-DELTLRGISQFYA 246 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 V K K + K+ Sbjct 247 FVEEKQ----------------------------------------KLHCLNTLFSKLKI 266 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +QAIIFC + + L + + G +SC H R + F++G V Sbjct 267 NQAIIFCNSTNRVELLAKKITELG---------YSCYYSHAKMPQQARNKVFHEFRQGSV 317 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+ + + K Sbjct 318 RTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINFIHWDDRKS 377 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDG 686 +++ + G + S+I+ L T + +DE Sbjct 378 LFNIETELGT-----------------EIKPIPSDIDRSLYVTEDEASIPRPFKIDELPK 420 Query 687 KVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSF 726 + +KR G Y+G PT Q +A T + Sbjct 421 GNEHSRKR--NGYEYRGQ-----PTSQGFPQQPPQANTGY 453 Score = 101 bits (252), Expect = 3e-21, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E G+ E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT +F IP + Sbjct 29 KSFEEFGLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPAL 88 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 Q V L Q + + Sbjct 89 QQVKTKLNKIQV---------LILVPTRELALQ 112 >sp|O02494|IF4A_CRYPV Eukaryotic initiation factor 4A OS=Cryptosporidium parvum OX=5807 GN=EIF4-A PE=2 SV=1 Length=405 Score = 332 bits (852), Expect = 6e-106, Method: Composition-based stats. Identities = 110/426 (26%), Positives = 191/426 (45%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F A L+ L+ F +G E+ + G + D +G A + + Sbjct 33 FEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAALQK 92 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 + NA + L++ P+RELA+Q Y + LR +GG + RD ++ L++G Sbjct 93 IDYSLNACQVLLLAPTRELAQQIQKVALALGDYCE---LRCHACVGGTSVRDDMNKLKSG 149 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V +VVGTPGR+ D++ G L + ++ +LDEAD +LS+G+ I+ + ++PQ Sbjct 150 VHMVVGTPGRVFDMLDKGYLRVDNLKLFILDEADEMLSRGFKVQIHDIFKKLPQ------ 203 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 +QV + SAT+ + ++ L+ + M P + +K E+ + + V V ++ Sbjct 204 DVQVALFSATMPN-EILHLTTQFMRDPKRILVKQEELTLEGIRQFYVGVEKDEWKM---- 258 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + + + + QAII+C T+ Sbjct 259 -----------------------------------DTLIDLYETLTIVQAIIYCNTRRRV 283 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L + ++ F+C +HGD +R+ + +F+ G R LI TD+ ARGI Sbjct 284 DQLTKQMRER---------DFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITTDLLARGI 334 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP + Y+HRIGR GR + G++I+ V + + Y Sbjct 335 DVQQVSLVINYDLPVSPETYIHRIGRSGRFGKKGVSINFVTDDDIVCLRDIERH-----Y 389 Query 640 NTRLKE 645 NT+++E Sbjct 390 NTQIEE 395 Score = 90.2 bits (222), Expect = 6e-18, Method: Composition-based stats. Identities = 58/376 (15%), Positives = 114/376 (30%), Gaps = 70/376 (19%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F + + ++ + + + P+ IQ I IL G D + A++G+GKT F I Sbjct 30 VECFEALNLEGDLLRGIFAYGFEKPSAIQQRGIKPILDGYDTIGQAQSGTGKTATFVIAA 89 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREVKE- 118 +Q + +L Q T + Y A +G + ++K Sbjct 90 LQKIDYSLNACQVLLLAPTRELAQQIQKVALALGDYCELRCHACVGGTSVRDDMNKLKSG 149 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQ 178 H T G + D+G RV L + + G + H+ Sbjct 150 VHMVVGTPGRV-------FDMLDKGYLRV----DNLKLFILDEADEMLSRGFKVQIHDI- 197 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE- 237 F+ P ALF A + Sbjct 198 -------------------------------------FKKLPQDVQVALFSATMPNEILH 220 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-AQVTQTKFLPNAPKALIVEPSR 296 L F + + K + L Y+ + + +A+I +R Sbjct 221 LTTQFMRDPKRILVKQEELTLEGIRQFYVGVEKDEWKMDTLIDLYETLTIVQAIIYCNTR 280 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGTPGRLDD 352 + Q K + + G + +D+ ++ +++ T D Sbjct 281 -------RRVDQLTKQMRERDFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITT-----D 328 Query 353 LVSTGKLNLSQVRFLV 368 L++ G +++ QV ++ Sbjct 329 LLARG-IDVQQVSLVI 343 >sp|Q12099|FAL1_YEAST ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FAL1 PE=1 SV=1 Length=399 Score = 330 bits (847), Expect = 2e-105, Method: Composition-based stats. Identities = 121/442 (27%), Positives = 189/442 (43%), Gaps = 72/442 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + F + +D L F+ +K + F + LK+ L+ + F+ P A+++ Sbjct 1 MSFDRE-EDQKLKFKTSKKLKVSSTFESMNLKDDLLRGIYSY-GFEAPSSIQSRAITQII 58 Query 263 DGY-IVKSQHSGNAQ--------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G ++ SG + + +ALI+ P+RELA Q +K Y+ Sbjct 59 SGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM 118 Query 314 DNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + + I GG +D L ++ G V GTPGR+ D++ L V+ LVLDEA Sbjct 119 N---VNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEA 175 Query 373 DGLLS--QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 D LLS G+ I + ++P K QV+V SAT++ D+ +++ K M+ P + Sbjct 176 DELLSETLGFKQQIYDIFAKLP------KNCQVVVVSATMNK-DILEVTRKFMNDPVKIL 228 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 +K ++ + + VV V+ + Sbjct 229 VKRDEISLEGIKQYVVNVDKEE-------------------------------------- 250 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 K + + Q +IFC TK D L Q IQ F+ V +HGD K Sbjct 251 -WKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQ---------SNFAVVSMHGDMK 300 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 ER + + F+ G R LI TDV ARGID+ V VIN LP+ +NY+HRIGR GR Sbjct 301 QEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFG 360 Query 611 RMGLAISLVATEKEKVWYHVCS 632 R G+AI+ + + Sbjct 361 RKGVAINFITKADLAKLREIEK 382 Score = 111 bits (278), Expect = 5e-25, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 0/126 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F M + ++ + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++ Sbjct 23 STFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL 82 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 Q + KD Q T + Y +AFAI + + HG Sbjct 83 QAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHG 142 Query 122 CRATKG 127 C+A G Sbjct 143 CQAVSG 148 >sp|A6ZXY5|FAL1_YEAS7 ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=FAL1 PE=3 SV=1 Length=399 Score = 330 bits (847), Expect = 2e-105, Method: Composition-based stats. Identities = 121/442 (27%), Positives = 189/442 (43%), Gaps = 72/442 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + F + +D L F+ +K + F + LK+ L+ + F+ P A+++ Sbjct 1 MSFDRE-EDQKLKFKTSKKLKVSSTFESMNLKDDLLRGIYSY-GFEAPSSIQSRAITQII 58 Query 263 DGY-IVKSQHSGNAQ--------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G ++ SG + + +ALI+ P+RELA Q +K Y+ Sbjct 59 SGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM 118 Query 314 DNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + + I GG +D L ++ G V GTPGR+ D++ L V+ LVLDEA Sbjct 119 N---VNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEA 175 Query 373 DGLLS--QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 D LLS G+ I + ++P K QV+V SAT++ D+ +++ K M+ P + Sbjct 176 DELLSETLGFKQQIYDIFAKLP------KNCQVVVVSATMNK-DILEVTRKFMNDPVKIL 228 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 +K ++ + + VV V+ + Sbjct 229 VKRDEISLEGIKQYVVNVDKEE-------------------------------------- 250 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 K + + Q +IFC TK D L Q IQ F+ V +HGD K Sbjct 251 -WKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQ---------SNFAVVSMHGDMK 300 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 ER + + F+ G R LI TDV ARGID+ V VIN LP+ +NY+HRIGR GR Sbjct 301 QEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFG 360 Query 611 RMGLAISLVATEKEKVWYHVCS 632 R G+AI+ + + Sbjct 361 RKGVAINFITKADLAKLREIEK 382 Score = 111 bits (278), Expect = 5e-25, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 0/126 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F M + ++ + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++ Sbjct 23 STFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLL 82 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 Q + KD Q T + Y +AFAI + + HG Sbjct 83 QAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHG 142 Query 122 CRATKG 127 C+A G Sbjct 143 CQAVSG 148 >sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP2 PE=3 SV=1 Length=554 Score = 335 bits (860), Expect = 3e-105, Method: Composition-based stats. Identities = 107/422 (25%), Positives = 176/422 (42%), Gaps = 67/422 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K + ++ + ++ G + G + Sbjct 124 VLDEVKQEGFAKPTGIQCQGWPMALS--------GRDMIGVAATGSGKTLSYCLPGIVHI 175 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q +F + ++R + GGV Q+ Sbjct 176 NAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGA---SSRIRNTCVYGGVPKSQQIRD 232 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L+ GV+I++ TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 233 LQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI---- 288 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +VK+L+ +H P V + E S T+ +V Sbjct 289 --RPDRQTLMWSATWPK-EVKQLASDYLHDPIQVQIGSLELSASHTITQIV--------- 336 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ ++ K + + + + + IIF Sbjct 337 ----------------------------EVLTDFEKRDRLAKHLETASQDQDSKIIIFAS 368 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK CD + Y +G + + +HGD+ +ER L F+ G ++ TDV Sbjct 369 TKRTCDEITSYLRTEG---------WPALAIHGDKAQNERDWVLAEFRSGRSPIMVATDV 419 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARGID+ G+ YVIN +P ++YVHRIGR GRA G AIS + + + Sbjct 420 AARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALIKIM 479 Query 635 GK 636 + Sbjct 480 RE 481 Score = 96.0 bits (237), Expect = 2e-19, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G + V++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 112 IRSFDEAGFPSYVLDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPG 171 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 172 IVHI----NAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGASS 213 >sp|Q6CX73|FAL1_KLULA ATP-dependent RNA helicase FAL1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=FAL1 PE=3 SV=1 Length=398 Score = 330 bits (846), Expect = 3e-105, Method: Composition-based stats. Identities = 118/450 (26%), Positives = 189/450 (42%), Gaps = 71/450 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + F+++ D L F+ +K A F + LK L+ + F++P A+S+ Sbjct 1 MSFNRD-DDSKLKFKTSKKLKVSATFESMNLKPDLLRGIY-FYGFEYPSSIQSRAISQII 58 Query 263 DGY-IVKSQHSGNAQ--------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G ++ SG + + +AL++ P+RELA Q+ + I Y+ Sbjct 59 SGKDVIAQAQSGTGKTATFTIGLLQAIDSKSKELQALVLSPTRELASQSESVISNLGDYL 118 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 + + GG A + + + +V GTPGR+ D++ LN+ + LVLDEAD Sbjct 119 N---VTAHACTGGKALQQDIKKVSKNCQVVSGTPGRVLDMIKRQVLNVRNCKILVLDEAD 175 Query 374 GLLS--QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 LL G+ I + ++P +QV+V SAT+ S D+ ++++K M P + + Sbjct 176 ELLGETLGFKQQIYDIFTKLP------PTIQVVVVSATM-SKDILEITKKFMSDPVKILV 228 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 K ++ D + V V + Sbjct 229 KRDEISLDVIKQYYVDVEKEE--------------------------------------- 249 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + Q +IFC T+ D L + Q FS +HGD K Sbjct 250 WKFDTLCDLYDSLTITQCVIFCNTRKKVDWLSRKLTQ---------TNFSVSSMHGDMKQ 300 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 ER Q + F+ G R LI TDV ARGID+ + VIN +PD +NY+HRIGR GR R Sbjct 301 EERDQVMNDFRSGKARVLISTDVWARGIDVQQISLVINYDIPDNLENYIHRIGRSGRFGR 360 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 G+AI+ + E+ + S T Sbjct 361 KGVAINFITKEERPKLKEIESHYRIKIKPT 390 Score = 96.7 bits (239), Expect = 4e-20, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 2/129 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F M + P++ + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++ Sbjct 23 ATFESMNLKPDLLRGIYFYGFEYPSSIQSRAISQIISGKDVIAQAQSGTGKTATFTIGLL 82 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV--KEW 119 Q + K+ Q T S + Y +A A Q + K Sbjct 83 QAIDSKSKELQALVLSPTRELASQSESVISNLGDYLNVTAHACTGGKALQQDIKKVSKNC 142 Query 120 HGCRATKGL 128 T G Sbjct 143 QVVSGTPGR 151 >sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP2 PE=3 SV=1 Length=546 Score = 334 bits (857), Expect = 6e-105, Method: Composition-based stats. Identities = 108/426 (25%), Positives = 177/426 (42%), Gaps = 67/426 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K + ++ V ++ G + G + Sbjct 124 VLNEVKAEGFDKPTGIQCQGWPMALS--------GRDMVGIAATGSGKTLSYCLPGIVHI 175 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q +F + ++R + GGV Q+ Sbjct 176 NAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGH---SSRIRNTCVYGGVPKSQQIRD 232 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L G +IV+ TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 233 LSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI---- 288 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +VK+L+ ++ P V + E S + +V Sbjct 289 --RPDRQTLMWSATWPK-EVKQLAADYLNDPIQVQVGSLELSASHNITQIV--------- 336 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ S+ K + + + + +IF Sbjct 337 ----------------------------EVVSDFEKRDRLNKYLETASQDNEYKTLIFAS 368 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK CD++ +Y + G + + +HGD+ ER L+ F+ G ++ TDV Sbjct 369 TKRMCDDITKYLREDG---------WPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDV 419 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARGID+ G+ YVIN +P ++YVHRIGR GRA G AIS + + + + S Sbjct 420 AARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIM 479 Query 635 GKGCYN 640 + N Sbjct 480 REANQN 485 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 32/154 (21%), Positives = 56/154 (36%), Gaps = 11/154 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 112 ITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 171 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF--AIGSDGLCC-----QS 113 I + Q G I + + + S F + C +S Sbjct 172 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKS 227 Query 114 REVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 +++++ G+ + L RV Sbjct 228 QQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRV 261 >sp|Q55D61|IF4A_DICDI Eukaryotic initiation factor 4A OS=Dictyostelium discoideum OX=44689 GN=tifA PE=3 SV=1 Length=405 Score = 329 bits (844), Expect = 7e-105, Method: Composition-based stats. Identities = 118/451 (26%), Positives = 197/451 (44%), Gaps = 76/451 (17%) Query 208 NGKDLGLAFE-----IPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSK 260 N + G +F+ ++ + F + L+ L+ FN+G E+ + + + K Sbjct 9 NSSNDGSSFKLNETFTSSEVEVKPTFESMGLREELLRGIFNYGFEKPSAIQQRAILPIIK 68 Query 261 APDGYIVKSQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 D +G L +P+ LI+ P+RELA+Q ++++ Sbjct 69 GRDTIAQAQSGTGKTATFSIGALQCVEVNVRSPQVLILSPTRELAQQIQKVALALSEFMN 128 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 ++ +GG D + LE GV IV GTPGR+ D+++ L ++ ++LDEAD Sbjct 129 ---IQVHACVGGKNLSDDVKKLETGVHIVSGTPGRVLDMITRKSLPTRHIKMMILDEADE 185 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 +LS G+ IN ++ +P T Q+++ SATL + DV ++EK M P + LK + Sbjct 186 MLSLGFQQQINDVYRYLPNGT------QIVLVSATL-TQDVVSMTEKFMTKPVRILLKRD 238 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + D + V V + K Sbjct 239 ELTLDGIKQFFVSVEKED---------------------------------------WKF 259 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + QA+IFC TK D L + + F+ +HGD ER Sbjct 260 GTLCDIYDSLTITQAVIFCNTKKKVDQLTEQM---------RDANFTVASMHGDMVQKER 310 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 ++ ++ F+ G+ R LI TD+ ARGID+ V VIN LP +++NY+HRIGR GR R G+ Sbjct 311 EEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGV 370 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 AI+ V ++ + + Y+T++ E Sbjct 371 AINFVKNSDIRILRDI-----EQFYSTQIDE 396 Score = 93.3 bits (230), Expect = 6e-19, Method: Composition-based stats. Identities = 28/128 (22%), Positives = 47/128 (37%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ E+ + + + P+ IQ +I I+ G D + A++G+GKT FSI +Q Sbjct 33 TFESMGLREELLRGIFNYGFEKPSAIQQRAILPIIKGRDTIAQAQSGTGKTATFSIGALQ 92 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE--WH 120 V ++ Q T ++ + A + E H Sbjct 93 CVEVNVRSPQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGGKNLSDDVKKLETGVH 152 Query 121 GCRATKGL 128 T G Sbjct 153 IVSGTPGR 160 >sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP2 PE=1 SV=1 Length=546 Score = 334 bits (857), Expect = 7e-105, Method: Composition-based stats. Identities = 108/426 (25%), Positives = 177/426 (42%), Gaps = 67/426 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K + ++ V ++ G + G + Sbjct 124 VLNEVKAEGFDKPTGIQCQGWPMALS--------GRDMVGIAATGSGKTLSYCLPGIVHI 175 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q +F + ++R + GGV Q+ Sbjct 176 NAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGH---SSRIRNTCVYGGVPKSQQIRD 232 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L G +IV+ TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 233 LSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI---- 288 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +VK+L+ ++ P V + E S + +V Sbjct 289 --RPDRQTLMWSATWPK-EVKQLAADYLNDPIQVQVGSLELSASHNITQIV--------- 336 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ S+ K + + + + +IF Sbjct 337 ----------------------------EVVSDFEKRDRLNKYLETASQDNEYKTLIFAS 368 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK CD++ +Y + G + + +HGD+ ER L+ F+ G ++ TDV Sbjct 369 TKRMCDDITKYLREDG---------WPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDV 419 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARGID+ G+ YVIN +P ++YVHRIGR GRA G AIS + + + + S Sbjct 420 AARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIM 479 Query 635 GKGCYN 640 + N Sbjct 480 REANQN 485 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 32/154 (21%), Positives = 56/154 (36%), Gaps = 11/154 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 112 ITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 171 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF--AIGSDGLCC-----QS 113 I + Q G I + + + S F + C +S Sbjct 172 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKS 227 Query 114 REVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 +++++ G+ + L RV Sbjct 228 QQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRV 261 >sp|Q755N4|DBP2_EREGS ATP-dependent RNA helicase DBP2 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP2 PE=3 SV=2 Length=557 Score = 333 bits (854), Expect = 3e-104, Method: Composition-based stats. Identities = 108/426 (25%), Positives = 179/426 (42%), Gaps = 67/426 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K + ++ + ++ G + G + Sbjct 125 VLKEVKEEGFEKPTAIQCQGWPMALS--------GRDMIGVAATGSGKTLSYCLPGIVHI 176 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q +F + + ++R + GGV Q+ Sbjct 177 NAQPLLSPGDGPVVLVLAPTRELAVQIQKECSKFGR---SSRIRNTCVYGGVPKSQQIRD 233 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L+ GV+I++ TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 234 LQRGVEILIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI---- 289 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +V++L+ +H P V++ E + T+ +V Sbjct 290 --RPDRQTLMWSATWPK-EVQQLARDYLHDPIQVNIGSLELAASHTITQLV--------- 337 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ S+ K + + + K + IIF Sbjct 338 ----------------------------EVVSDFDKRDRLVKHLEIASKDKDSKIIIFAS 369 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK CD + Y Q G + + +HGD++ ER L F+ G ++ TDV Sbjct 370 TKRTCDEITSYLRQDG---------WPALAIHGDKQQQERDWVLNEFRTGRSPIMVATDV 420 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARGID+ G+ +VIN +P ++YVHRIGR GRA G AIS + + + S Sbjct 421 AARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLGAQLISIM 480 Query 635 GKGCYN 640 + Sbjct 481 REAKQE 486 Score = 98.3 bits (243), Expect = 4e-20, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + + V+E + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 113 IRTFDEAGFPEYVLKEVKEEGFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPG 172 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G + + + + S F S Sbjct 173 IVHI----NAQPLLSPGDGPVVLVLAPTRELAVQIQKECSKFGRSS 214 >sp|Q94A52|RH2_ARATH Eukaryotic initiation factor 4A-III homolog OS=Arabidopsis thaliana OX=3702 GN=EIF4A3 PE=1 SV=2 Length=408 Score = 328 bits (840), Expect = 4e-104, Method: Composition-based stats. Identities = 117/443 (26%), Positives = 192/443 (43%), Gaps = 71/443 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D L FE ++ F +K L+ + +G E+ + + + + D Sbjct 20 DDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQA 79 Query 269 SQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G + +ALI+ P+RELA QT I+ + + ++ Sbjct 80 QSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHAN---IQAHA 136 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 IGG + + + LE+GV +V GTPGR+ D++ L ++ L+LDE+D +LS+G+ D Sbjct 137 CIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKD 196 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ +P LQV + SATL ++ +++ K M P + +K ++ + + Sbjct 197 QIYDVYRYLP------PDLQVCLVSATLP-HEILEMTSKFMTEPVKILVKRDELTLEGIK 249 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V V + + L Y I Sbjct 250 QFFVAVEKEEWKF----------------------------------DTLCDLYDTLTIT 275 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 QA+IFC TK D L + + H F+ +HGD ER + F+ Sbjct 276 -----QAVIFCNTKRKVDYLSEKM---------RSHNFTVSSMHGDMPQKERDAIMNEFR 321 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 GD R LI TDV ARGID+ V VIN LP+ ++ Y+HRIGR GR R G+AI+ V ++ Sbjct 322 SGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD 381 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 K+ + + Y+T++ E Sbjct 382 DIKILRDI-----EQYYSTQIDE 399 Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 2/138 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F++MG+ ++ + V E + P+ IQ ++ IL G DV+ A++G+GKT ++ V Sbjct 34 ITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSV 93 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Q+V + ++ Q T + + + A A G K H Sbjct 94 CQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHAC-IGGNSVGEDIRKLEH 152 Query 121 GCRATKGLMKGKHYYEVS 138 G G G+ + Sbjct 153 GVHVVSG-TPGRVCDMIK 169 >sp|Q5B0J9|DBP2_EMENI ATP-dependent RNA helicase dbp2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp2 PE=3 SV=1 Length=563 Score = 332 bits (852), Expect = 6e-104, Method: Composition-based stats. Identities = 110/433 (25%), Positives = 184/433 (42%), Gaps = 69/433 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K Q +++ V +++ G + + Sbjct 151 VLSEVKAQGFEKPTAIQSQGWPMALS--------GRDVVGIAETGSGKTLSYCLPAIVHI 202 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P LI+ P+RELA Q I +F K + ++R + GGV Q+ Sbjct 203 NAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGK---SSRIRNTCVYGGVPKGPQIRD 259 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++ + TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 260 LSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI---- 315 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDR 454 Q + SAT +V++L+ ++ V++ D S + +V Sbjct 316 --RPDRQTCMWSATWPK-EVRQLASDFLNNYIQVNIGSMDLSANHRITQIV--------- 363 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ SE K + + I E++ ++ ++F Sbjct 364 ----------------------------EVISEFEKRDRMIKHLEKIMENRGNKCLVFTG 395 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK D + ++ Q G + + +HGD++ ER L FK G ++ TDV Sbjct 396 TKRIADEITRFLRQDG---------WPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDV 446 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-- 632 A+RGID+ + +VIN P+ ++YVHRIGR GRA G AI+ T+ K + + Sbjct 447 ASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARDLVTIL 506 Query 633 SRGKGCYNTRLKE 645 S K + RL E Sbjct 507 SEAKQQIDPRLAE 519 Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 44/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT ++ +P Sbjct 139 VETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPA 198 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 199 IVHI----NAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSS 240 >sp|Q6BY27|DBP2_DEBHA ATP-dependent RNA helicase DBP2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP2 PE=3 SV=1 Length=536 Score = 331 bits (849), Expect = 7e-104, Method: Composition-based stats. Identities = 111/424 (26%), Positives = 176/424 (42%), Gaps = 71/424 (17%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG----YIVKSQHSG 273 + +K Q ++ V ++ G Y + S Sbjct 116 VLKEVKQQGFPKPTSIQCQGWPMALS--------GRDMVGIASTGSGKTLSYCLPSIVHI 167 Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 NAQ + + P L++ P+RELA Q K+ + ++R + GG Q+ Sbjct 168 NAQPLLSPG--DGPIVLVLAPTRELAVQIQQEC---SKFGSSSRIRNTCVYGGAPKGQQI 222 Query 334 SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 L GV+I + TPGRL D++ TGK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 223 RDLARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI-- 280 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKT 452 Q ++ SAT +V+ L+ ++ P V + E + T+ +V Sbjct 281 ----RPDRQTLMWSATWPK-EVQALTRDYLNDPIQVTVGSLELAASHTITQLV------- 328 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 E+ +E K + + + +IF Sbjct 329 ------------------------------EVVTEFEKRDRLIKHLETATADPEAKCLIF 358 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 TK CD + Y G + + +HGD++ ER L+ FK G ++ T Sbjct 359 ASTKRTCDEITNYLRADG---------WPALAIHGDKQQGERDWVLKEFKTGKSPIMVAT 409 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 DVAARGID+ G+ YVIN+ +P ++YVHRIGR GRA G A+S K+ +C Sbjct 410 DVAARGIDVKGISYVINLDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLGGDLCK 469 Query 633 SRGK 636 + Sbjct 470 IMRE 473 Score = 100 bits (249), Expect = 8e-21, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G + + V++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 104 ITSFDEAGFPDYVLKEVKQQGFPKPTSIQCQGWPMALSGRDMVGIASTGSGKTLSYCLPS 163 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 164 IVHI----NAQPLLSPGDGPIVLVLAPTRELAVQIQQECSKFGSSS 205 >sp|P41380|IF4A3_NICPL Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1 Length=391 Score = 326 bits (835), Expect = 9e-104, Method: Composition-based stats. Identities = 117/442 (26%), Positives = 196/442 (44%), Gaps = 75/442 (17%) Query 214 LAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L FE ++ A F +K+ L+ + +G E+ + + + D ++ Sbjct 6 LVFETSKGVEPIASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRD--VIAQAQ 63 Query 272 SGNAQVTQT--------KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 SG + + + +ALI+ P+RELA QT I YI+ ++ Sbjct 64 SGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYIN---VQAHAC 120 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 IGG + + + LE+GV +V GTPGR+ D++ L ++ L+LDE+D +LS+G+ D Sbjct 121 IGGKSVGEDIRKLEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDEMLSRGFKDQ 180 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 I ++ +P LQV++ SATL + ++ +++ K M P + +K ++ + + Sbjct 181 IYDVYRYLP------PELQVVLISATLPN-EILEITSKFMTDPVRILVKRDELTLEGIKQ 233 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V V + + L Y I Sbjct 234 FFVAVEKEEWKF----------------------------------DTLCDLYDTLTIT- 258 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 QA+IFC TK D L + + F+ +HGD ER + F+ Sbjct 259 ----QAVIFCNTKRKVDWLTSKMRE---------NNFTVSSMHGDMPQKERDAIMAEFRG 305 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G R LI TDV ARG+D+ V VIN LP+ ++ Y+HRIGR GR R G+AI+ V ++ Sbjct 306 GTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 365 Query 624 EKVWYHVCSSRGKGCYNTRLKE 645 K+ + + Y+T++ E Sbjct 366 IKILRDI-----EQYYSTQIDE 382 Score = 92.9 bits (229), Expect = 7e-19, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 2/141 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +A+F+EMG+ ++ + V + + P+ IQ ++ I+ G DV+ A++G+GKT ++ V Sbjct 17 IASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIALTV 76 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 QIV + Q T + + Y A A G K H Sbjct 77 CQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHAC-IGGKSVGEDIRKLEH 135 Query 121 GCRATKGLMKGKHYYEVSCHD 141 G + G G+ + Sbjct 136 GVQVVSG-TPGRVCDMIKRRT 155 >sp|A5DE68|FAL1_PICGU ATP-dependent RNA helicase FAL1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=FAL1 PE=3 SV=2 Length=397 Score = 326 bits (836), Expect = 9e-104, Method: Composition-based stats. Identities = 116/444 (26%), Positives = 187/444 (42%), Gaps = 72/444 (16%) Query 211 DLGLAFEIP-PHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIV 267 D L F +K F + LK LK +N+G E + + + D Sbjct 8 DEELEFTKSTKKVKIYPTFESMNLKPELLKGIYNYGFEAPSAIQSRAIMQIIRGRDTIAQ 67 Query 268 KSQHSGNAQ------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 +G ++ +AL++ P+RELA+Q N I+ Y++ +R Sbjct 68 AQSGTGKTATFSIGILSSIDTKSKDCQALVLSPTRELAQQIENVIEHLGDYMN---VRSH 124 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 IGG + + L+ G I+ GTPGR+ D++ + V+ LVLDEAD LL++G+ Sbjct 125 ACIGGTQVGEDVKKLQQGQHIISGTPGRVLDMIKRRNIMPRHVKMLVLDEADELLTKGFK 184 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + I ++ +P QV+V SATL +V +++ K P + +K +D + Sbjct 185 EQIYEIYKTLPAGA------QVVVVSATLTP-EVLEMTNKFTSDPVKILVKRDDVTLKGI 237 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + + K + Sbjct 238 KQYYIQCEKED---------------------------------------WKFDTLCDLY 258 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + QA+IFC TK + L + F+ +HGD K +R ++ F Sbjct 259 DNLTITQAVIFCNTKAKVNWLAGQM---------RKSNFTVAAMHGDMKQEDRDSIMKEF 309 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + G R LI TDV ARGID+ V VIN LP +K+NYVHRIGR GR R G AI+L+ + Sbjct 310 RSGSTRVLISTDVWARGIDVQQVSLVINYDLPLDKENYVHRIGRSGRFGRKGTAINLLTS 369 Query 622 EKEKVWYHVCSSRGKGCYNTRLKE 645 + + + + Y+T+++E Sbjct 370 QDKDELKSL-----QHYYSTKIRE 388 Score = 97.5 bits (241), Expect = 3e-20, Method: Composition-based stats. Identities = 23/101 (23%), Positives = 41/101 (41%), Gaps = 9/101 (9%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + PE+ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI ++ Sbjct 25 TFESMNLKPELLKGIYNYGFEAPSAIQSRAIMQIIRGRDTIAQAQSGTGKTATFSIGILS 84 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + KD Q S + + Sbjct 85 SIDTKSKDCQ---------ALVLSPTRELAQQIENVIEHLG 116 >sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp2 PE=2 SV=2 Length=550 Score = 331 bits (849), Expect = 1e-103, Method: Composition-based stats. Identities = 124/526 (24%), Positives = 206/526 (39%), Gaps = 97/526 (18%) Query 161 DKFGFGFGGTGKKSHNKQFDNYG-----EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLA 215 D +G+ G+ + + D G +++ I D K H Sbjct 44 DGASYGYDQRGQGRNFYESDGPGANLVKKDWKNETLIPFQKDFYKEHENVRNRSDAEVTE 103 Query 216 FEIPPHMKNQAL-------------FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + + L FP VLK + F+ P A A Sbjct 104 YRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKE------VKQLGFEAPTPIQQQAWPMAM 157 Query 263 DGYIVKSQHSGNAQVTQTKFLP--------------NAPKALIVEPSRELAEQTLNNIKQ 308 G + + + T + LP + P L++ P+RELA Q + Sbjct 158 SGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTK 217 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 F K + ++R + GGV Q+ L GV+I + TPGRL D++ + K NL +V +LV Sbjct 218 FGK---SSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLV 274 Query 369 LDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 LDEAD +L G+ I ++ +QI Q ++ SAT +V++L+ ++ Sbjct 275 LDEADRMLDMGFEPQIRKIVDQI------RPDRQTVMFSATWPK-EVQRLARDYLNDYIQ 327 Query 429 VDLKGEDSVPD-TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 V + D + +V V+ R RLGK Sbjct 328 VTVGSLDLAASHNIKQIVEVVDNADKR--ARLGK-------------------------- 359 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + + + + ++ +IF TK D++ ++ Q G + + +HG Sbjct 360 ---------DIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDG---------WPALAIHG 401 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 D+ ER L F+ G ++ TDVA+RGID+ G+ +V N P ++YVHRIGR G Sbjct 402 DKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTG 461 Query 608 RAERMGLAISLVATEKEKVWYHVCS--SRGKGCYNTRLKEDGGCTI 651 RA G A + ++ K + S S K + +L+E + Sbjct 462 RAGAKGTAYTYFTSDNAKQARELVSILSEAKQDIDPKLEEMARYSS 507 Score = 101 bits (252), Expect = 4e-21, Method: Composition-based stats. Identities = 24/106 (23%), Positives = 46/106 (43%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + + V+++ + PT IQ ++ P+ + G D++ + TGSGKT ++ +P Sbjct 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPA 180 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 181 IVHI----NAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSS 222 >sp|Q4X195|DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp2 PE=3 SV=2 Length=547 Score = 331 bits (848), Expect = 1e-103, Method: Composition-based stats. Identities = 111/448 (25%), Positives = 188/448 (42%), Gaps = 69/448 (15%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N + G + +K Q +++ V +++ G + Sbjct 122 NFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALS--------GRDVVGIAETGSGKTL 173 Query 268 KSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + L + P LI+ P+RELA Q I +F K + ++R + G Sbjct 174 TYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGK---SSRIRNTCVYG 230 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 GV Q+ L GV++ + TPGRL D++ G+ NL +V +LVLDEAD +L G+ I Sbjct 231 GVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIR 290 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHV 444 ++ +QI Q + SAT +V++L+ ++ V++ D S + + Sbjct 291 KIVSQI------RPDRQTCMWSATWPK-EVRQLATDFLNDYIQVNIGSMDLSANHRITQI 343 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V E+ S+ K K + I E+ Sbjct 344 V-------------------------------------EVVSDFEKRDKMIKHLEKIMEN 366 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + ++ +IF TK D + ++ Q G + + +HGD++ ER L FK G Sbjct 367 RSNKCLIFTGTKRIADEITRFLRQDG---------WPALSIHGDKQQQERDWVLNEFKTG 417 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ++ TDVA+RGID+ + +V+N P+ ++Y+HRIGR GRA G AI+ TE Sbjct 418 KSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENS 477 Query 625 KVWYHVCS--SRGKGCYNTRLKEDGGCT 650 K + + + K + RL E + Sbjct 478 KQARDLVTILTEAKQQIDPRLAEMARYS 505 Score = 100 bits (250), Expect = 6e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 120 VENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 179 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 180 IVHI----NAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSS 221 >sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP2 PE=3 SV=1 Length=552 Score = 330 bits (847), Expect = 3e-103, Method: Composition-based stats. Identities = 110/443 (25%), Positives = 184/443 (42%), Gaps = 69/443 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N + G + +K Q ++ + ++ G + Sbjct 117 NFDEAGFPPYVLKEVKQQGFEKPTAIQCQGWPMAL--------TGRDVIGIASTGSGKTL 168 Query 268 KSQHSGNAQVTQTKFLPNA--PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + L + P L++ P+RELA Q +F K + K+R + G Sbjct 169 SYCLPAIVHINAQPMLSHGDGPIVLVLAPTRELAVQIQQECSKFGK---SSKIRNTCVYG 225 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 GV Q+ L GV+IV+ TPGRL D++ +GK NL +V +LVLDEAD +L G+ I Sbjct 226 GVPRGQQIRDLARGVEIVIATPGRLLDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIR 285 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHV 444 ++ +QI Q ++ SAT +V++L+ + V++ E S + V Sbjct 286 KIVDQI------RPDRQTLMWSATWPK-EVQRLAHDYLKDQIQVNIGSLELSASHNITQV 338 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V E+ +E K + + + E+ Sbjct 339 V-------------------------------------EVCTEYEKRDRLVKHLETVMEN 361 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 K + +IF TK D++ ++ Q G + + +HGD++ ER L F++G Sbjct 362 KESKCLIFTGTKRVADDITKFLRQDG---------WPALAIHGDKQQQERDWVLNEFRQG 412 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ++ TDVA+RGID+ G+ +VIN P ++YVHRIGR GRA G A + + Sbjct 413 KSPIMVATDVASRGIDVKGINFVINYDYPSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNR 472 Query 625 KVWYHV--CSSRGKGCYNTRLKE 645 K + K + +L+E Sbjct 473 KQARDLLVILREAKQHIDPKLEE 495 Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 4/107 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G P + + V++ + PT IQ + P+ L G DV+ A TGSGKT ++ +P Sbjct 115 VTNFDEAGFPPYVLKEVKQQGFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSYCLPA 174 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 I + Q G I + + + S F S Sbjct 175 IVHI----NAQPMLSHGDGPIVLVLAPTRELAVQIQQECSKFGKSSK 217 >sp|A1DGZ7|DBP2_NEOFI ATP-dependent RNA helicase dbp2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp2 PE=3 SV=1 Length=545 Score = 330 bits (846), Expect = 3e-103, Method: Composition-based stats. Identities = 111/443 (25%), Positives = 187/443 (42%), Gaps = 69/443 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N + G + +K Q +++ V +++ G + Sbjct 120 NFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALS--------GRDVVGIAETGSGKTL 171 Query 268 KSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + L + P LI+ P+RELA Q I +F K + ++R + G Sbjct 172 TYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEISKFGK---SSRIRNTCVYG 228 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 GV Q+ L GV++ + TPGRL D++ G+ NL +V +LVLDEAD +L G+ I Sbjct 229 GVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIR 288 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHV 444 ++ +QI Q + SAT +V++L+ ++ V++ D S + + Sbjct 289 KIISQI------RPDRQTCMWSATWPK-EVRQLATDFLNDYIQVNIGSMDLSANHRITQI 341 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V E+ S+ K K + I E+ Sbjct 342 V-------------------------------------EVVSDFEKRDKMIKHLEKIMEN 364 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + ++ +IF TK D + ++ Q G + + +HGD++ ER L FK G Sbjct 365 RGNKCLIFTGTKRIADEITRFLRQDG---------WPALSIHGDKQQQERDWVLNEFKTG 415 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ++ TDVA+RGID+ + +V+N P+ ++Y+HRIGR GRA G AI+ TE Sbjct 416 KSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENS 475 Query 625 KVWYHVCS--SRGKGCYNTRLKE 645 K + + + K + RL E Sbjct 476 KQARDLVTILTEAKQQIDPRLAE 498 Score = 100 bits (250), Expect = 6e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 118 VENFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 177 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 178 IVHI----NAQPLLAPGDGPIVLILAPTRELAVQIQTEISKFGKSS 219 >sp|G0SFM2|DBP2_CHATD ATP-dependent RNA helicase DBP2 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) OX=759272 GN=DBP2 PE=3 SV=2 Length=556 Score = 330 bits (846), Expect = 4e-103, Method: Composition-based stats. Identities = 108/429 (25%), Positives = 183/429 (43%), Gaps = 69/429 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K Q ++ V +++ G + + Sbjct 140 VMDEVKAQGFPAPTAIQAQGWPMALS--------GRDVVGIAETGSGKTLTYCLPAIVHI 191 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q I +F K + ++R I GGV Q+ Sbjct 192 NAQPLLAPGDGPIVLVLAPTRELAVQIQQEINKFGK---SSRIRNTCIYGGVPKGPQIRD 248 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L+ GV++ + TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 249 LQRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI---- 304 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD-TVHHVV--VPVNPKT 452 Q ++ SAT +V+ L+ + V++ D + + +V + + K Sbjct 305 --RPDRQTLMWSATWPK-EVRNLAADFLTDFIQVNIGSLDLAANHRITQIVEVISESEKR 361 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 DRL + L K D ++ +IF Sbjct 362 DRLIKHLEKIMDSRDT-------------------------------------QNKCLIF 384 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 TK D++ ++ Q G + + +HGD++ +ER L++FK G ++ T Sbjct 385 VGTKRVADDITRFLRQDG---------WPALSIHGDKQQNERDWVLDQFKTGKSPIMVAT 435 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 DVA+RGID+ + +VIN P+ ++Y+HRIGR GRA G AI+ TE K + S Sbjct 436 DVASRGIDVRNITHVINYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENAKQARDLVS 495 Query 633 SRGKGCYNT 641 + + Sbjct 496 VLQEAKQHV 504 Score = 100 bits (248), Expect = 1e-20, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQA+ P+ L G DV+ AETGSGKT + +P Sbjct 128 VETFDEAGFPRYVMDEVKAQGFPAPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPA 187 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 188 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQQEINKFGKSS 229 >sp|Q4PHU9|DBP2_USTMA ATP-dependent RNA helicase DBP2 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP2 PE=3 SV=2 Length=552 Score = 330 bits (845), Expect = 5e-103, Method: Composition-based stats. Identities = 103/430 (24%), Positives = 172/430 (40%), Gaps = 68/430 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 I +K +++ VA+++ G + + Sbjct 141 ILSEIKKMGFSEPSAIQSQAWPMALS--------GRDLVAIAETGSGKTIGFALPAMVHI 192 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P ALI+ P+RELA Q +F + +LR + GGV Q+ Sbjct 193 NAQPLLKPGDGPIALILAPTRELANQIQVECNRFG---GSSRLRTCAVYGGVPKGPQIRD 249 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L+ G +I + TPGRL D+V GK NL +V +LV+DEAD +L G+ I ++ QI Sbjct 250 LQRGAEICIATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQI---- 305 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +V++L+ ++ V++ E + V ++ Sbjct 306 --RPDRQTLMFSATWPK-EVQRLAGDFLNNYAQVNIGSTELAANHNVKQIIEVCTE---- 358 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 + + K++ + A + + IIF Sbjct 359 ------------------------------FEKKGKLIGHLETISA----ENGKVIIFTS 384 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK D+L ++ Q G + + +HGD++ ER L FK G ++ T V Sbjct 385 TKRVADDLTKFLRQDG---------WPALAIHGDKQQQERDWVLAEFKSGRSPIMVATAV 435 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 A+RG+D+ + YVIN P ++YVH+IGR GRA R G A + E K + Sbjct 436 ASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSKSARELIGIL 495 Query 635 GKGCYNTRLK 644 + + Sbjct 496 REAKQEIPRE 505 Score = 102 bits (255), Expect = 2e-21, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G I +++M + P+ IQ+++ P+ L G D++ AETGSGKT F++P Sbjct 129 VTSFDEAGFPDYILSEIKKMGFSEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPA 188 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + Q K G I + + + F S Sbjct 189 MVHI----NAQPLLKPGDGPIALILAPTRELANQIQVECNRFGGSS 230 >sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP2 PE=3 SV=2 Length=562 Score = 330 bits (845), Expect = 5e-103, Method: Composition-based stats. Identities = 107/424 (25%), Positives = 178/424 (42%), Gaps = 71/424 (17%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K+Q ++ + ++ G + + Sbjct 138 VLQEVKDQGFPKPTPIQCQGWPMALS--------GRDMIGIAATGSGKTLSYCLPSIVHI 189 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q +F K + ++R + GG Q+ Sbjct 190 NAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGK---SSRIRNTCVYGGAPKGPQIRD 246 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV+I + TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 247 LARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI---- 302 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVN--PKT 452 Q ++ SAT +V++L+ ++ P V + E + T+ +V ++ K Sbjct 303 --RPDRQTLMWSATWPK-EVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKR 359 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 DRL + L + K ++ ++F Sbjct 360 DRLVKHLESAL---------------------------------------NEKDNKILVF 380 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 TK CD + Y G + + +HGD++ +ER L+ F+KG ++ T Sbjct 381 ASTKRTCDEITTYLRSDG---------WPALAIHGDKEQNERDWVLDEFRKGKTSIMVAT 431 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 DVAARGID+ G+ +VIN +P ++YVHRIGR GR G AIS K+ +C Sbjct 432 DVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCK 491 Query 633 SRGK 636 + Sbjct 492 IMRE 495 Score = 104 bits (259), Expect = 6e-22, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + Q V++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 126 ITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPS 185 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q + + G I + + + S F S Sbjct 186 IVHI----NAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSS 227 >sp|Q2U070|DBP2_ASPOR ATP-dependent RNA helicase dbp2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp2 PE=3 SV=1 Length=554 Score = 329 bits (844), Expect = 6e-103, Method: Composition-based stats. Identities = 108/433 (25%), Positives = 184/433 (42%), Gaps = 69/433 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K Q +++ V +++ G + + Sbjct 141 VLSEVKAQGFERPTAIQSQGWPMALS--------GRDVVGIAETGSGKTLSYCLPAIVHI 192 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q I +F K + ++R + GGV Q+ Sbjct 193 NAQPLLAPGDGPIVLVLAPTRELAVQIQAEITKFGK---SSRIRNTCVYGGVPKGPQIRD 249 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++ + TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 250 LSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI---- 305 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDR 454 Q + SAT +V++L+ ++ V++ D S + +V Sbjct 306 --RPDRQTCMWSATWPK-EVRQLASDFLNDYIQVNIGSMDLSANHRITQIV--------- 353 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ S+ K K + I E++ ++ +IF Sbjct 354 ----------------------------EVVSDFEKRDKMIKHLEKIMENRGNKCLIFTG 385 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK D + ++ Q G + + +HGD++ ER L FK G ++ TDV Sbjct 386 TKRIADEITRFLRQDG---------WPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDV 436 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-- 632 A+RGID+ + +V+N P+ ++YVHRIGR GRA G AI+ T+ K + + Sbjct 437 ASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTIL 496 Query 633 SRGKGCYNTRLKE 645 + K + RL E Sbjct 497 TEAKQQIDPRLAE 509 Score = 102 bits (253), Expect = 3e-21, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 44/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT ++ +P Sbjct 129 VETFDEAGFPQYVLSEVKAQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPA 188 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 189 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQAEITKFGKSS 230 >sp|A5DL80|DBP2_PICGU ATP-dependent RNA helicase DBP2 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP2 PE=3 SV=3 Length=554 Score = 329 bits (844), Expect = 7e-103, Method: Composition-based stats. Identities = 123/481 (26%), Positives = 192/481 (40%), Gaps = 78/481 (16%) Query 161 DKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPP 220 +K + + ++ +E HD DI K F + G + Sbjct 86 EKNFYSEHPDVSARSESEVQSFRKE---HDMKCVGTDIPKPITSFD----EAGFPDYVLN 138 Query 221 HMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG----YIVKSQHSGNAQ 276 +K Q ++ + ++ G Y + S NAQ Sbjct 139 EVKQQGFPKPTAIQCQGWPMALS--------GRDMIGIAATGSGKTLSYCLPSIVHINAQ 190 Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + P L++ P+RELA Q +F + ++R I GG Q+ L Sbjct 191 PLLGPG--DGPIVLVLAPTRELAVQIQQECSKFGA---SSRIRNTCIYGGAPKGQQIRDL 245 Query 337 ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 GV+I + TPGRL D++ TGK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 246 ARGVEICIATPGRLIDMLETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI----- 300 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDRL 455 Q ++ SAT +V+ L+ ++ P V + E + T+ +V Sbjct 301 -RPDRQTLMWSATWPK-EVQTLTRDYLNDPIQVTIGSLELAASHTITQIV---------- 348 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 E+ SE K + + K + +IF T Sbjct 349 ---------------------------EVLSEFEKRDRLVKHLETATADKEAKVLIFSST 381 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K CD + Y G + + +HGD++ +ER L FK G ++ TDVA Sbjct 382 KRACDEITSYLRADG---------WPALAIHGDKQQNERDWVLREFKTGKSPIMVATDVA 432 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 ARGID+ G+ YVIN +P ++YVHRIGR GRA G A+SL K+ +C Sbjct 433 ARGIDVKGISYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTEANSKLGGDLCKIMR 492 Query 636 K 636 + Sbjct 493 E 493 Score = 100 bits (248), Expect = 1e-20, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G + V++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 124 ITSFDEAGFPDYVLNEVKQQGFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPS 183 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 184 IVHI----NAQPLLGPGDGPIVLVLAPTRELAVQIQQECSKFGASS 225 >sp|A7E449|DBP2_SCLS1 ATP-dependent RNA helicase dbp2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp2 PE=3 SV=1 Length=572 Score = 329 bits (844), Expect = 1e-102, Method: Composition-based stats. Identities = 123/455 (27%), Positives = 193/455 (42%), Gaps = 79/455 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N G P ++A FPA V+ + F P A G V Sbjct 136 NIAVQGPNIPKPVETFDEAGFPAYVMTE------VKAQGFPAPTPIQSQGWPMALSGRDV 189 Query 268 KSQHSGNAQVTQTKFLP--------------NAPKALIVEPSRELAEQTLNNIKQFKKYI 313 + T T LP + P L++ P+RELA Q I +F K Sbjct 190 VGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGK-- 247 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 + ++R + GGV Q+ L GV++ + TPGRL D++ +GK NL +V +LVLDEAD Sbjct 248 -SSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEAD 306 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 +L G+ I ++ QI Q + SAT +V+ L+ ++ V++ Sbjct 307 RMLDMGFEPQIRKILGQI------RPDRQTCMWSATWPK-EVRALASDYLNDFIQVNIGS 359 Query 434 -EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 E S + +V E+ SE K Sbjct 360 LELSANHRITQIV-------------------------------------EVVSEFEKRD 382 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + I E K ++ +IF TK D++ ++ Q G + + +HGD++ + Sbjct 383 KMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDG---------WPALSIHGDKQQN 433 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER L FK G ++ TDVA+RGID+ + +V N P+ ++Y+HRIGR GRA + Sbjct 434 ERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQK 493 Query 613 GLAISLVATEKEKVWYHVCS--SRGKGCYNTRLKE 645 G AI+L T+ +K + + + K + RL E Sbjct 494 GTAITLFTTDNQKQARDLVNVLTEAKQVIDPRLAE 528 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 148 VETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 207 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 208 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSS 249 >sp|A6SFW7|DBP2_BOTFB ATP-dependent RNA helicase dbp2 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp2 PE=3 SV=2 Length=514 Score = 327 bits (839), Expect = 1e-102, Method: Composition-based stats. Identities = 123/455 (27%), Positives = 193/455 (42%), Gaps = 79/455 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N G P ++A FPA V+ + F P A G V Sbjct 89 NIAVQGPNIPKPVETFDEAGFPAYVMTE------VKAQGFPAPTPIQSQGWPMALSGRDV 142 Query 268 KSQHSGNAQVTQTKFLP--------------NAPKALIVEPSRELAEQTLNNIKQFKKYI 313 + T T LP + P L++ P+RELA Q I +F K Sbjct 143 VGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGK-- 200 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 + ++R + GGV Q+ L GV++ + TPGRL D++ +GK NL +V +LVLDEAD Sbjct 201 -SSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEAD 259 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 +L G+ I ++ QI Q + SAT +V+ L+ ++ V++ Sbjct 260 RMLDMGFEPQIRKILGQI------RPDRQTCMWSATWPK-EVRALASDYLNEFIQVNIGS 312 Query 434 -EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 E S + +V E+ SE K Sbjct 313 LELSANHRITQIV-------------------------------------EVVSEFEKRD 335 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + I E K ++ +IF TK D++ ++ Q G + + +HGD++ + Sbjct 336 KMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDG---------WPALSIHGDKQQN 386 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER L FK G ++ TDVA+RGID+ + +V N P+ ++Y+HRIGR GRA + Sbjct 387 ERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQK 446 Query 613 GLAISLVATEKEKVWYHVCS--SRGKGCYNTRLKE 645 G AI+L T+ +K + + + K + RL E Sbjct 447 GTAITLFTTDNQKQARDLVNVLTEAKQVIDPRLAE 481 Score = 100 bits (248), Expect = 9e-21, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 101 VETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 160 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 161 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSS 202 >sp|A6RGE3|DBP2_AJECN ATP-dependent RNA helicase DBP2 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP2 PE=3 SV=1 Length=542 Score = 328 bits (840), Expect = 2e-102, Method: Composition-based stats. Identities = 111/435 (26%), Positives = 185/435 (43%), Gaps = 68/435 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K Q ++ V +++ G + + Sbjct 136 VMSEVKAQGFARPTAIQAQGWPMALS--------GRDVVGIAETGSGKTLTYCLPAIVHI 187 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q I +F K + ++R + GGV Q+ Sbjct 188 NAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGK---SSRIRNTCVYGGVPKGPQIRD 244 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++ + TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 245 LTRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQI---- 300 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDR 454 Q + SAT DV++L++ +H V++ D S + +V V+ R Sbjct 301 --RPDRQTCMWSATWPK-DVRQLAQDFLHDYIQVNIGSMDLSANHRITQIVEIVSEFEKR 357 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 ++ R ++ +K + +IF Sbjct 358 ------------------------------------DRMAKHLDRIMEANKHSKVLIFTG 381 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK D++ ++ Q G + + +HGD++ +ER L FK G ++ TDV Sbjct 382 TKRVADDITRFLRQDG---------WPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDV 432 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-- 632 A+RGID+ + +V+N P+ ++YVHRIGR GRA G AI+L T+ K + + Sbjct 433 ASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQARDLVAIL 492 Query 633 SRGKGCYNTRLKEDG 647 S K + RL E Sbjct 493 SESKQQIDPRLAEMA 507 Score = 100 bits (249), Expect = 7e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQA+ P+ L G DV+ AETGSGKT + +P Sbjct 124 VETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPA 183 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 184 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSS 225 >sp|A2QC74|DBP2_ASPNC ATP-dependent RNA helicase dbp2 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp2 PE=3 SV=1 Length=565 Score = 328 bits (841), Expect = 2e-102, Method: Composition-based stats. Identities = 109/433 (25%), Positives = 184/433 (42%), Gaps = 69/433 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K Q +++ V +++ G + + Sbjct 148 VLSEVKAQGFDRPTAIQSQGWPMALS--------GRDVVGIAETGSGKTLTYCLPAIVHI 199 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P LI+ P+RELA Q I +F K + ++R + GGV Q+ Sbjct 200 NAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGK---SSRIRNTCVYGGVPKGPQIRD 256 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++ + TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 257 LSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI---- 312 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDR 454 Q + SAT +V++L+ ++ V++ D S + +V Sbjct 313 --RPDRQTCMWSATWPK-EVRQLASDFLNDYIQVNIGSMDLSANHRITQIV--------- 360 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ S+ K K + I E++ ++ +IF Sbjct 361 ----------------------------EVVSDFEKRDKMIKHLEKIMENRANKCLIFTG 392 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK D + ++ Q G + + +HGD++ ER L FK G ++ TDV Sbjct 393 TKRIADEITRFLRQDG---------WPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDV 443 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-- 632 A+RGID+ + +V+N P+ ++YVHRIGR GRA G AI+ T+ K + + Sbjct 444 ASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTIL 503 Query 633 SRGKGCYNTRLKE 645 + K + RL E Sbjct 504 TEAKQQIDPRLAE 516 Score = 101 bits (252), Expect = 4e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 136 VETFDEAGFPQYVLSEVKAQGFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 195 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 196 IVHI----NAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSS 237 >sp|Q8Y8N0|CSHA_LISMO ATP-dependent RNA helicase CshA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=cshA PE=2 SV=1 Length=520 Score = 327 bits (837), Expect = 2e-102, Method: Composition-based stats. Identities = 108/431 (25%), Positives = 176/431 (41%), Gaps = 70/431 (16%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 GL +I + A ++ + + ++ G Sbjct 7 FGLDEKIVKSVNRMGFEEATPIQEKTIPLGL--------EGKDLIGQAQTGTGKTAAF-- 56 Query 272 SGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 G + + N +ALI+ P+RELA Q + + + +R L + GG Sbjct 57 -GLPMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLS---YDKHVRVLAVYGGSDISR 112 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 Q+ L+ IVVGTPGR+ D ++ L L V LVLDEAD +L+ G+ D I + ++ Sbjct 113 QIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMGFIDDIETILKEV 172 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P Q ++ SAT+ ++++ E+ MH P + +K ++ + V V+ K Sbjct 173 PA------ERQTLLFSATMPDP-IRRIGERFMHSPELIRIKAKEMTALLIEQFFVKVHEK 225 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 K + R + + AI+ Sbjct 226 E----------------------------------------KFDVLSRLLDVQAPELAIV 245 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F RTK D L + +G + +HGD +R L +FK+G + L+ Sbjct 246 FGRTKRRVDELSRALDMRG---------YVAEGIHGDLTQAKRMSVLRKFKEGKIDVLVA 296 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+AI+ V + V Sbjct 297 TDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVQPREMGYLRIVE 356 Query 632 SSRGKGCYNTR 642 + K + Sbjct 357 ETTKKRMQPLQ 367 Score = 107 bits (266), Expect = 6e-23, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 57/130 (44%), Gaps = 2/130 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M FSE G+ +I ++V M + T IQ ++IPL L G D++ A+TG+GKT AF +P+ Sbjct 1 MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLEGKDLIGQAQTGTGKTAAFGLPM 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGAS--VLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 I + + + Q T L K + + R A GSD K Sbjct 61 IHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVLAVYGGSDISRQIRSLKKN 120 Query 119 WHGCRATKGL 128 T G Sbjct 121 PQIVVGTPGR 130 >sp|Q0DB53|RH52A_ORYSJ DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0602400 PE=2 SV=2 Length=602 Score = 329 bits (844), Expect = 3e-102, Method: Composition-based stats. Identities = 98/370 (26%), Positives = 161/370 (44%), Gaps = 54/370 (15%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 P+AL++ P+RELA Q K+F LR ++ GG +QL LE G DI+V Sbjct 168 KPRALVLAPTRELAAQINEEAKKFS---FQTGLRVVVAYGGTPMYNQLRDLERGADILVA 224 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL D+V K++L +++LV+DEAD +L G+ I ++ ++ Q ++ Sbjct 225 TPGRLVDMVERSKVSLEAIKYLVMDEADRMLDMGFEPQIRKIVERMN--MPRKSVRQTML 282 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT ++++L+ + ++ + S D + V ++ R + Sbjct 283 FSATFPP-EIQRLASDFLSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGY--------- 332 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + +L+ + A + + ++F TK + D+L + Sbjct 333 ----------------------LLDLLQRQSVGVANSKLQQPLTLVFVETKREADSLRYW 370 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +G F +HGDR ER+ L FK G ++ TDVA+RG+D+ V Sbjct 371 LYSKG---------FPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNVA 421 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 +VIN LP ++YVHRIGR GRA + G A + S KG + Sbjct 422 HVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESD--------HSLAKGLLELMTEA 473 Query 646 DGGCTIWYNE 655 W + Sbjct 474 KQDVPDWLVQ 483 Score = 96.0 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 7/107 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F G++ + + V + PT +Q S+P+ L G D++ A+TGSGKT AF +PV+ Sbjct 86 FEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTGSGKTAAFCLPVVSG 145 Query 64 VYE-------TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + + + + + F+ Sbjct 146 LVAAGGSGIGHRERSSFNRAAAKPRALVLAPTRELAAQINEEAKKFS 192 >sp|Q1DP69|DBP2_COCIM ATP-dependent RNA helicase DBP2 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP2 PE=3 SV=2 Length=545 Score = 327 bits (839), Expect = 3e-102, Method: Composition-based stats. Identities = 110/433 (25%), Positives = 183/433 (42%), Gaps = 69/433 (16%) Query 220 PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ 279 +K Q +++ V +++ G + + Sbjct 141 SEVKAQGFAKPTPIQSQGWPMALS--------GRDVVGIAETGSGKTLTYCLPAIVHINA 192 Query 280 TKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 L + P L++ P+RELA Q I +F K + ++R + GGV Q+ L Sbjct 193 QPLLGPGDGPIVLVLAPTRELAVQIQAEITKFGK---SSRIRNTCVYGGVPRGPQIRDLS 249 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 GV++ + TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ QI Sbjct 250 RGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI------ 303 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDRLW 456 Q + SAT +V++L+ +H V + +D S + +V Sbjct 304 RPDRQTCMWSATWPK-EVRQLAHDFLHDYIQVYIGSQDLSANHRITQIV----------- 351 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 E+ S+ K + + I + K + +IF TK Sbjct 352 --------------------------EIVSDFEKRDRMINHLERIMDDKKSKILIFTGTK 385 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 D++ ++ Q G + + +HGD++ +ER L FK G ++ TDVA+ Sbjct 386 RVADDITRFLRQDG---------WPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVAS 436 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS--SR 634 RGID+ + +V+N P+ ++YVHRIGR GRA G AI+L T+ K + + + Sbjct 437 RGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTDNAKQARDLVNILTE 496 Query 635 GKGCYNTRLKEDG 647 K + RL E Sbjct 497 SKQQIDPRLAEMA 509 Score = 102 bits (253), Expect = 3e-21, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 127 VETFDEAGFPQYVISEVKAQGFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 186 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 187 IVHI----NAQPLLGPGDGPIVLVLAPTRELAVQIQAEITKFGKSS 228 >sp|Q501J6|DDX17_MOUSE Probable ATP-dependent RNA helicase DDX17 OS=Mus musculus OX=10090 GN=Ddx17 PE=1 SV=1 Length=650 Score = 330 bits (847), Expect = 3e-102, Method: Composition-based stats. Identities = 112/460 (24%), Positives = 182/460 (40%), Gaps = 63/460 (14%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQF 309 V +++ G + + +L + P L++ P+RELA+Q + Sbjct 129 GRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDY 188 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 K +L+ I GG Q+ LE GV+I + TPGRL D + +GK NL + +LVL Sbjct 189 GKC---SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVL 245 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD +L G+ I ++ +QI Q ++ SAT +V++L+E + T + Sbjct 246 DEADRMLDMGFEPQIRKIVDQI------RPDRQTLMWSATWPK-EVRQLAEDFLRDYTQI 298 Query 430 DLKG-EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 ++ E S + +V E+ Sbjct 299 NVGNLELSANHNILQIVDVCM-------------------------------------ES 321 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K K + I K ++ IIF TK CD+L + + G + +C+HGD Sbjct 322 EKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDG---------WPAMCIHGD 372 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + ER L F+ G LI TDVA+RG+D+ V +VIN P+ ++YVHRIGR R Sbjct 373 KSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTAR 432 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 + G A + K + + N + + + Sbjct 433 STNKGTAYTFFTPGNLKQARELIKVLEEA--NQAINPKLMQLVDHRGGGGGGGGRSRYRT 490 Query 669 TISQVEPDI--KVPVDEFDGKVTYGQKRAAGGGSYKGHVD 706 T S P++ + D V G +R + + D Sbjct 491 TSSANNPNLMYQDECDRRLRGVKDGGRRDSTSYRDRSETD 530 Score = 95.6 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 29/141 (21%), Positives = 51/141 (36%), Gaps = 9/141 (6%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AF + + + + PT IQ + PL L G D++ A+TGSGKT A+ +P I Sbjct 93 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 152 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 + Q ++G I + + + G C + + + G Sbjct 153 HI----NHQPYLERGDGPICLVLAPTRELAQQVQQVADDY-----GKCSRLKSTCIYGGA 203 Query 123 RATKGLMKGKHYYEVSCHDQG 143 + + E+ G Sbjct 204 PKGPQIRDLERGVEICIATPG 224 >sp|Q2HBE7|DED1_CHAGB ATP-dependent RNA helicase DED1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DED1 PE=3 SV=1 Length=688 Score = 332 bits (850), Expect = 3e-102, Method: Composition-based stats. Identities = 107/434 (25%), Positives = 170/434 (39%), Gaps = 85/434 (20%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 NG+DL + LFP +F + P +++ GY Sbjct 234 NGRDLMACAQTGSGKTGGFLFPIM-------HQSFTQGPSPIP--------AQSGGGY-- 276 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + P ALI+ P+REL Q ++F +R ++ GG Sbjct 277 -------------RQRKAYPTALILAPTRELVSQIYEEARKFA---YRSWVRPCVVYGGA 320 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 QL +E G D++V TPGRL DL+ G+++L +++LVLDEAD +L G+ I R+ Sbjct 321 DIGSQLRQMERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRI 380 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + Q ++ SAT D++ L++ ++ ++ + S + + V Sbjct 381 VQG--EDMPTTGQRQTLMFSATFP-RDIQMLAQDFLNDYVFLSVGRVGSTSENITQKVEY 437 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H Sbjct 438 VE----------------------------------------DVDKRSVLLDILHTHAGG 457 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +IF TK D+L + I Q F +HGDR ER++ LE F+ G Sbjct 458 LTLIFVETKRMADSLSDFLINQ---------NFPATSIHGDRTQRERERALELFRNGKCP 508 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA G+A + + Sbjct 509 ILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGNRGIV 568 Query 628 YHVCSSRGKGCYNT 641 + + Sbjct 569 RELLDLLKEANQEV 582 Score = 95.2 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (41%), Gaps = 7/113 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS + + +E + +PT +Q SIP+++ G D++ A+TGSGKTG F P+ Sbjct 197 VLTFSNPPLDAHLLSNIELARYQIPTPVQKYSIPIVINGRDLMACAQTGSGKTGGFLFPI 256 Query 61 IQIVYETLKDQQEGKKGKT-------TIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + + G + + Y+ FA S Sbjct 257 MHQSFTQGPSPIPAQSGGGYRQRKAYPTALILAPTRELVSQIYEEARKFAYRS 309 >sp|Q5VQL1|RH14_ORYSJ DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1 Length=708 Score = 332 bits (851), Expect = 3e-102, Method: Composition-based stats. Identities = 107/427 (25%), Positives = 179/427 (42%), Gaps = 70/427 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + G EI ++ ++ + VA++K G + Sbjct 182 FQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD--------IVAVAKTGSGKTLG 233 Query 269 SQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + + + P L++ P+RELA Q + K+F + + ++ + + GG Sbjct 234 YLIPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGR---SSRISSVCLYGGA 290 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 QL LE G DIVV TPGRL+D++ +++L QV +LVLDEAD +L G+ I ++ Sbjct 291 PKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKI 350 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP--DTVHHVV 445 Q+ + Q ++ +AT +V+K++ ++ P V++ D + ++ V Sbjct 351 VKQV------QPKRQTLMFTATWPK-EVRKIASDLLSNPVQVNIGNTDQLVANKSITQYV 403 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + P PE +IL+ + Sbjct 404 DVITP-------------------------------PEKSRRLDQILRS--------QEP 424 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + IIFC TK CD L + +Q + +HGD+ ER L F+ G Sbjct 425 GSKIIIFCSTKRMCDQLARNLARQ----------YGASAIHGDKSQAERDSVLSEFRSGR 474 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TDVAARG+DI + V+N P ++YVHRIGR GRA G+A + + K Sbjct 475 CPILVATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSK 534 Query 626 VWYHVCS 632 + Sbjct 535 YASDLVK 541 Score = 102 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 63/370 (17%), Positives = 127/370 (34%), Gaps = 57/370 (15%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F G PEI + V++ + PT IQA+S P+ L D++ A+TGSGKT + IP Sbjct 181 TFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFI 240 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 ++ Q + G T + S + D F G + V + G Sbjct 241 LLKRL---QHNSRDGPTVL--VLSPTRELATQIQDEAKKF-----GRSSRISSVCLYGGA 290 Query 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNY 182 L + ++ G + SL + + + + F+ Sbjct 291 PKGPQLRDLERGADIVVATPGRLNDILEMRRVSL----HQVSYLVLDEADRMLDMGFEPQ 346 Query 183 GEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNF 242 + + + + F+ P ++ + +L N ++ N Sbjct 347 IRKIVKQ------VQPKRQTLMFT---------ATWPKEVRK---IASDLLSNP-VQVNI 387 Query 243 GEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQT 302 G ++++ D + Q+ +++ K +I ++ + +Q Sbjct 388 GNT----DQLVANKSITQYVDVITPPEKSRRLDQILRSQE--PGSKIIIFCSTKRMCDQL 441 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGTPGRLDDLVSTGK 358 N+ + + I G + ++ SVL I+V T D+ + G Sbjct 442 ARNLAR--------QYGASAIHGDKSQAERDSVLSEFRSGRCPILVAT-----DVAARG- 487 Query 359 LNLSQVRFLV 368 L++ +R +V Sbjct 488 LDIKDIRVVV 497 >sp|Q9P6U9|DED1_NEUCR ATP-dependent RNA helicase ded1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-9 PE=3 SV=1 Length=688 Score = 331 bits (849), Expect = 4e-102, Method: Composition-based stats. Identities = 100/381 (26%), Positives = 155/381 (41%), Gaps = 55/381 (14%) Query 261 APDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + + S +A + P ALI+ P+REL Q + ++F +R Sbjct 254 SQSFHTGPSPIPASAAGAYGRQRKAYPTALILAPTRELVSQIYDEARKFA---YRSWVRP 310 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 ++ GG QL +E G D++V TPGRL DL+ G+++L +++LVLDEAD +L G+ Sbjct 311 CVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGF 370 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I R+ + Q ++ SAT D++ L+ + ++ + S + Sbjct 371 EPQIRRIVEG--EDMPKVNDRQTLMFSATFP-RDIQILARDFLKDYIFLSVGRVGSTSEN 427 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + V V I K + Sbjct 428 ITQKVEYVE----------------------------------------DIDKRSVLLDI 447 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + H +IF TK D+L + I Q F +HGDR ER++ LE Sbjct 448 LHTHAGGLTLIFVETKRMADSLSDFLINQ---------NFPATSIHGDRTQRERERALEM 498 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA G+A + Sbjct 499 FRNGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFN 558 Query 621 TEKEKVWYHVCSSRGKGCYNT 641 V + + Sbjct 559 RGNRGVVRELLELLKEANQEV 579 Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 27/114 (24%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS + + ++ + +PT +Q SIP+++GG D++ A+TGSGKTG F P+ Sbjct 193 VLTFSNPPLDNHLISNIQLARYNVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPI 252 Query 61 IQIVYETLKDQQEG--------KKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + T ++ + + YD FA S Sbjct 253 LSQSFHTGPSPIPASAAGAYGRQRKAYPTALILAPTRELVSQIYDEARKFAYRS 306 >sp|Q7SBC6|DBP2_NEUCR ATP-dependent RNA helicase dbp2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-1 PE=3 SV=2 Length=562 Score = 327 bits (839), Expect = 5e-102, Method: Composition-based stats. Identities = 108/438 (25%), Positives = 184/438 (42%), Gaps = 67/438 (15%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K Q +++ V +++ G + + Sbjct 143 VMDEVKAQGFPAPTAIQSQGWPMALS--------GRDVVGIAETGSGKTLTYCLPAIVHI 194 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P LI+ P+RELA Q I +F K + ++R + GGV Q+ Sbjct 195 NAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGK---SSRIRNTCVYGGVPKGPQIRD 251 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++ + TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ QI Sbjct 252 LSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI---- 307 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD-TVHHVVVPVNPKTDR 454 Q ++ SAT +V+ L+ + V++ D + + +V V+ R Sbjct 308 --RPDRQTLMWSATWPK-EVRNLAADFLTDFIQVNIGSMDLAANHRITQIVEVVSESEKR 364 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 M KI++G ++ +IF Sbjct 365 ---------------------------DRMIKHLEKIMEG--------RENQNKILIFTG 389 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK D++ ++ Q G + + +HGD++ +ER L++FK G ++ TDV Sbjct 390 TKRVADDITRFLRQDG---------WPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDV 440 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 A+RGID+ + +V+N P+ ++Y+HRIGR GRA G AI+ T+ K + Sbjct 441 ASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARELVGVL 500 Query 635 G--KGCYNTRLKEDGGCT 650 K + RL E + Sbjct 501 QEAKQQIDPRLAEMARYS 518 Score = 100 bits (250), Expect = 6e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 131 VETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 190 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 191 IVHI----NAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGKSS 232 >sp|Q6BT27|FAL1_DEBHA ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=FAL1 PE=3 SV=1 Length=399 Score = 322 bits (824), Expect = 5e-102, Method: Composition-based stats. Identities = 123/452 (27%), Positives = 191/452 (42%), Gaps = 75/452 (17%) Query 210 KDLGLAFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY-I 266 D L F ++K A F + LK LK +G F+ P A+ + G Sbjct 8 VDNELEFSAKSTKNIKVHATFESMNLKTDLLKGIYGY-GFEAPSAIQSRAIMQIISGKDT 66 Query 267 VKSQHSGNAQ--------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 + SG + + +ALI+ P+RELA+Q + +K Y++ + Sbjct 67 IAQAQSGTGKTATFSIGMLEVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYMN---V 123 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 IGG + + L+ G IV GTPGR+ D++ L ++ ++LDEAD L+++ Sbjct 124 HTHACIGGTHVGEDIKKLQQGQQIVSGTPGRVVDMIKRRNLATRNIKMMILDEADELMTK 183 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 G+ + I ++ +P +QV+V SATL S +V +++ K P + +K +D Sbjct 184 GFKEQIYEIYRYLP------PGVQVVVVSATL-SREVLEVTGKFTTDPVKILVKRDDITL 236 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 + + + + K + Sbjct 237 EGIKQYHIQCEKED---------------------------------------WKFDTLC 257 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + QA+IFC TK+ + L K F+ V +HGD K ER + Sbjct 258 DLYDSLTITQAVIFCNTKVKVNWLTDQM---------KKANFTVVAMHGDMKQDERDSIM 308 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 F+ G+ R LI TDV ARGID+ V VIN LP +K+NYVHRIGR GR R G+AI+L Sbjct 309 NDFRTGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYVHRIGRSGRFGRKGVAINL 368 Query 619 VATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 V E + + Y R+KE Sbjct 369 VTKEDVDELRDI-----ERFYRIRIKEMPVNV 395 Score = 93.7 bits (231), Expect = 5e-19, Method: Composition-based stats. Identities = 24/102 (24%), Positives = 44/102 (43%), Gaps = 0/102 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F M + ++ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI ++ Sbjct 26 ATFESMNLKTDLLKGIYGYGFEAPSAIQSRAIMQIISGKDTIAQAQSGTGKTATFSIGML 85 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +++ KD Q T + Y A Sbjct 86 EVIDTKSKDCQALILSPTRELAQQIQSVVKHLGDYMNVHTHA 127 >sp|A1C6C4|DBP2_ASPCL ATP-dependent RNA helicase dbp2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp2 PE=3 SV=1 Length=549 Score = 327 bits (837), Expect = 6e-102, Method: Composition-based stats. Identities = 107/433 (25%), Positives = 184/433 (42%), Gaps = 69/433 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K+Q +++ V +++ G + + Sbjct 136 VLSEVKSQGFERPTAIQSQGWPMALS--------GRDVVGIAETGSGKTLTYCLPAIVHI 187 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q I +F K + ++R + GGV Q+ Sbjct 188 NAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGK---SSRIRNTCVYGGVPKGPQIRD 244 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++ + TPGRL D++ G+ NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 245 LSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI---- 300 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDR 454 Q + SAT +V++L+ ++ V++ D S + +V Sbjct 301 --RPDRQTCMWSATWPK-EVRQLASDFLNDYIQVNIGSMDLSANHRITQIV--------- 348 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ S+ K K + I E + ++ +IF Sbjct 349 ----------------------------EVVSDFEKRDKMIKHLEKIMEDRSNKILIFTG 380 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK D + ++ Q G + + +HGD++ ER L FK G ++ TDV Sbjct 381 TKRIADEITRFLRQDG---------WPALSIHGDKQQQERDWVLNEFKAGKSPIMVATDV 431 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-- 632 A+RGID+ + +V+N P+ ++Y+HRIGR GRA G AI+ T+ K + + Sbjct 432 ASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTIL 491 Query 633 SRGKGCYNTRLKE 645 + K + RL E Sbjct 492 TEAKQQIDPRLAE 504 Score = 101 bits (251), Expect = 5e-21, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 124 VETFDEAGFPQYVLSEVKSQGFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 183 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 184 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSS 225 >sp|Q92841|DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17 OS=Homo sapiens OX=9606 GN=DDX17 PE=1 SV=2 Length=729 Score = 331 bits (849), Expect = 1e-101, Method: Composition-based stats. Identities = 112/460 (24%), Positives = 182/460 (40%), Gaps = 63/460 (14%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQF 309 V +++ G + + +L + P L++ P+RELA+Q + Sbjct 208 GRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDY 267 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 K +L+ I GG Q+ LE GV+I + TPGRL D + +GK NL + +LVL Sbjct 268 GKC---SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVL 324 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD +L G+ I ++ +QI Q ++ SAT +V++L+E + T + Sbjct 325 DEADRMLDMGFEPQIRKIVDQI------RPDRQTLMWSATWPK-EVRQLAEDFLRDYTQI 377 Query 430 DLKG-EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 ++ E S + +V E+ Sbjct 378 NVGNLELSANHNILQIVDVCM-------------------------------------ES 400 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K K + I K ++ IIF TK CD+L + + G + +C+HGD Sbjct 401 EKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDG---------WPAMCIHGD 451 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + ER L F+ G LI TDVA+RG+D+ V +VIN P+ ++YVHRIGR R Sbjct 452 KSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTAR 511 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 + G A + K + + N + + + Sbjct 512 STNKGTAYTFFTPGNLKQARELIKVLEEA--NQAINPKLMQLVDHRGGGGGGGGRSRYRT 569 Query 669 TISQVEPDI--KVPVDEFDGKVTYGQKRAAGGGSYKGHVD 706 T S P++ + D V G +R + + D Sbjct 570 TSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD 609 Score = 95.6 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 29/141 (21%), Positives = 51/141 (36%), Gaps = 9/141 (6%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AF + + + + PT IQ + PL L G D++ A+TGSGKT A+ +P I Sbjct 172 AFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIV 231 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 + Q ++G I + + + G C + + + G Sbjct 232 HI----NHQPYLERGDGPICLVLAPTRELAQQVQQVADDY-----GKCSRLKSTCIYGGA 282 Query 123 RATKGLMKGKHYYEVSCHDQG 143 + + E+ G Sbjct 283 PKGPQIRDLERGVEICIATPG 303 >sp|A7EJY3|DED1_SCLS1 ATP-dependent RNA helicase ded1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=ded1 PE=3 SV=1 Length=678 Score = 330 bits (845), Expect = 1e-101, Method: Composition-based stats. Identities = 98/375 (26%), Positives = 155/375 (41%), Gaps = 55/375 (15%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 S NA + + P +LI+ P+REL Q + ++F +R ++ G Sbjct 251 TGPSPIPANAAGSFGRTRKAYPTSLILAPTRELVSQIFDESRKFA---YRSWVRPCVVYG 307 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G QL +E G D++V TPGRL DL+ G+++L +++LVLDEAD +L G+ I Sbjct 308 GADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIR 367 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 R+ + + Q ++ SAT D++ L+ + ++ + S + + V Sbjct 368 RIVEG--EDMPGVQNRQTLMFSATFP-RDIQMLARDFLKDYVFLSVGRVGSTSENITQKV 424 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V I K + + H Sbjct 425 EYVE----------------------------------------DIDKRSVLLDILHTHG 444 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IF TK D+L + I Q F +HGDR ER++ LE F+ G Sbjct 445 AGLTLIFVETKRMADSLSDFLINQ---------NFPATSIHGDRTQRERERALEMFRNGR 495 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ T VAARG+DI V +V+N LP + +YVHRIGR GRA G++ + Sbjct 496 CPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGISTAFFNRGNRG 555 Query 626 VWYHVCSSRGKGCYN 640 V + + Sbjct 556 VVRDLIELLKEANQE 570 Score = 98.7 bits (244), Expect = 5e-20, Method: Composition-based stats. Identities = 26/114 (23%), Positives = 49/114 (43%), Gaps = 8/114 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + + +E + +PT +Q SIP+++GG D++ A+TGSGKTG F P+ Sbjct 185 VLKFTNPPLDDHLIKNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPI 244 Query 61 IQIVYETLKDQQEGK--------KGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++T + + + +D FA S Sbjct 245 LSQAFQTGPSPIPANAAGSFGRTRKAYPTSLILAPTRELVSQIFDESRKFAYRS 298 >sp|P42305|DBPA_BACSU ATP-dependent RNA helicase DbpA OS=Bacillus subtilis (strain 168) OX=224308 GN=dbpA PE=1 SV=2 Length=479 Score = 323 bits (828), Expect = 2e-101, Method: Composition-based stats. Identities = 115/501 (23%), Positives = 201/501 (40%), Gaps = 78/501 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + KN + ++ +I ++ ++ + + ++ V S+ Sbjct 1 MSHFKNYQ---ISHDILRALEGLGYTEPTKVQQSVIPAALERKD--------LVVKSQTG 49 Query 263 DGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 G G + N P+ALI+ P+RELA Q +I ++ +++ Sbjct 50 SGKTASF---GIPLCELANWDENKPQALILTPTRELAVQVKEDITNIGRF---KRIKATA 103 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 + G + Q + L+ IVVGTPGR+ D + G L L ++ +LV+DEAD +L+ G+ + Sbjct 104 VFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIE 163 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + +P ++ SATL D++KLS + M P +++K + Sbjct 164 QVEAIIKHLPT------ERTTMLFSATLP-QDIEKLSRQYMQNPEHIEVKAAGLTTRNIE 216 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 H V+ V + K + Sbjct 217 HAVIQVREEN----------------------------------------KFSLLKDVLM 236 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 D IIFCRTK + L G + C +HG +R + FK Sbjct 237 TENPDSCIIFCRTKEHVNQLTDELDDLG---------YPCDKIHGGMIQEDRFDVMNEFK 287 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +G+ R+L+ TDVAARGIDI + VIN LP EK++YVHR GR GRA G AIS V Sbjct 288 RGEYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAF 347 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 +++ + G +++ + + + L+++ + S+ + ++ D Sbjct 348 EKRFLADIEEYIG--FEIQKIEAPSQEEVARKKPEFLAKLNDRPE---SKKDKSEELNKD 402 Query 683 EFDGKVTYGQKRAAGGGSYKG 703 G+K+ + G Sbjct 403 IMKLYFNGGKKKKIRAVDFVG 423 Score = 85.2 bits (209), Expect = 5e-16, Method: Composition-based stats. Identities = 49/317 (15%), Positives = 98/317 (31%), Gaps = 52/317 (16%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M+ F + +I +A+E + + PT +Q IP L D+++ ++TGSGKT +F IP+ Sbjct 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI-GSDGLCCQSREVKEW 119 ++ Q T + + + R A A+ G Q E+K+ Sbjct 61 CELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQK 120 Query 120 -HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQ 178 H T G+ + L D+ + + N Sbjct 121 SHIVVGTP----GRVLDHIEKGTLPL----------------DRLSYLVIDEADEMLNMG 160 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAEL 238 F E H P + LF A + ++ E Sbjct 161 FIEQVEAIIKH-----------------------------LPTERTTMLFSATLPQDIEK 191 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSRE 297 + + ++ + +++ + + + + P +I ++E Sbjct 192 LSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENPDSCIIFCRTKE 251 Query 298 LAEQTLNNIKQFKKYID 314 Q + + D Sbjct 252 HVNQLTDELDDLGYPCD 268 >sp|A6SEH9|DED1_BOTFB ATP-dependent RNA helicase ded1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=ded1 PE=3 SV=1 Length=683 Score = 330 bits (845), Expect = 2e-101, Method: Composition-based stats. Identities = 98/375 (26%), Positives = 155/375 (41%), Gaps = 55/375 (15%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 S NA + + P +LI+ P+REL Q + ++F +R ++ G Sbjct 251 TGPSPVPANAAGSFGRTRKAYPTSLILAPTRELVSQIYDESRKFA---YRSWVRPCVVYG 307 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G QL +E G D++V TPGRL DL+ G+++L +++LVLDEAD +L G+ I Sbjct 308 GADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIR 367 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 R+ + + Q ++ SAT D++ L+ + ++ + S + + V Sbjct 368 RIVEG--EDMPGVQNRQTLMFSATFP-RDIQMLARDFLKDYVFLSVGRVGSTSENITQKV 424 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V I K + + H Sbjct 425 EYVE----------------------------------------DIDKRSVLLDILHTHG 444 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IF TK D+L + I Q F +HGDR ER++ LE F+ G Sbjct 445 AGLTLIFVETKRMADSLSDFLINQ---------NFPATSIHGDRTQRERERALEMFRNGR 495 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ T VAARG+DI V +V+N LP + +YVHRIGR GRA G++ + Sbjct 496 CPILVATAVAARGLDIPNVKHVVNYDLPTDIDDYVHRIGRTGRAGNTGISTAFFNRGNRG 555 Query 626 VWYHVCSSRGKGCYN 640 V + + Sbjct 556 VCRDLIELLKEANQE 570 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 27/114 (24%), Positives = 49/114 (43%), Gaps = 8/114 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + + +E + +PT +Q SIP+++GG D++ A+TGSGKTG F P+ Sbjct 185 VLKFTNPPLDDHLIKNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPI 244 Query 61 IQIVYETLKDQQEGK--------KGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++T + + + YD FA S Sbjct 245 LSQAFQTGPSPVPANAAGSFGRTRKAYPTSLILAPTRELVSQIYDESRKFAYRS 298 >sp|A4QSS5|DBP2_PYRO7 ATP-dependent RNA helicase DBP2 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP2 PE=3 SV=1 Length=548 Score = 325 bits (834), Expect = 2e-101, Method: Composition-based stats. Identities = 102/426 (24%), Positives = 175/426 (41%), Gaps = 65/426 (15%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K Q +++ V +++ G + + Sbjct 136 VMDEVKAQGFPAPTAIQSQGWPMALS--------GRDVVGIAETGSGKTLTYCLPAIVHI 187 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P LI+ P+RELA Q I +F K + ++R + GGV Q+ Sbjct 188 NAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGK---SSRIRNTCVYGGVPKGPQIRD 244 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++ + TPGRL D++ +GK NL +V +LVLDEAD +L G+ I ++ QI Sbjct 245 LSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI---- 300 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +V+ ++ + V++ D S + +V V+ Sbjct 301 --RPDRQTLMWSATWPK-EVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSE---- 353 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 SE + + ++ +IF Sbjct 354 -------------------------------SEKRDRMIRHMEKVMDGKDSKNKILIFVG 382 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK D + ++ Q G + + +HGD++ +ER L++FK G ++ TDV Sbjct 383 TKRVADEITRFLRQDG---------WPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDV 433 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 A+RGID+ + +V+N P+ ++Y+HRIGR GRA G AI+ TE K + Sbjct 434 ASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLLGVL 493 Query 635 GKGCYN 640 + Sbjct 494 QEAKQE 499 Score = 100 bits (250), Expect = 6e-21, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 124 VETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 183 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 184 IVHI----NAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSS 225 >sp|P34580|DDX47_CAEEL Putative ATP-dependent RNA helicase T26G10.1 OS=Caenorhabditis elegans OX=6239 GN=T26G10.1 PE=3 SV=1 Length=489 Score = 323 bits (828), Expect = 2e-101, Method: Composition-based stats. Identities = 115/476 (24%), Positives = 179/476 (38%), Gaps = 83/476 (17%) Query 228 FPACVLKNAELKF--NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL-- 283 F + G + + + D + SG L Sbjct 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105 Query 284 ----PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 P A L++ P+RELA Q + L +I+GGV Q L Sbjct 106 LLDHPQAFFCLVLTPTRELAFQIGQQFEALG---SGIGLIAAVIVGGVDMAAQAMALARR 162 Query 340 VDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 I+V TPGRL D + +T NL ++FL++DEAD +L+ + ++++ IP Sbjct 163 PHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIP------ 216 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + + + SAT+ V KL + P V + D + + V K Sbjct 217 RERRTYLFSATMTK-KVSKLERASLRDPARVSVSSRYKTVDNLKQHYIFVPNK------- 268 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K Y V + EH + AI+FC T Sbjct 269 ---------------------------------YKETYLVYLLNEHAGNSAIVFCATCAT 295 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 + Q G V LHG +R +L +FK L+CTDVAARG Sbjct 296 TMQIAVMLRQLG---------MQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARG 346 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 +DI V VIN +P + ++YVHR+GR RA R G+AI++V + + + ++ GK Sbjct 347 LDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLGKKL 406 Query 639 YNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 + E NE+ +L E + + ++ + E D K G+KR Sbjct 407 DEYKCVE--------NEVMVLVE-------RTQEATENARIEMKEMDEKKKSGKKR 447 Score = 100 bits (250), Expect = 4e-21, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F+E+GV + A + + W+ P+ IQ ++P L G DV+ AETGSGKTGAF+IPV+ Sbjct 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + + + + + + A G + Sbjct 104 QSLLDH---------PQAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAA 144 >sp|Q6CLR3|DED1_KLULA ATP-dependent RNA helicase DED1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DED1 PE=3 SV=1 Length=627 Score = 327 bits (839), Expect = 2e-101, Method: Composition-based stats. Identities = 93/355 (26%), Positives = 154/355 (43%), Gaps = 55/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+I+ P+RELA Q + K K+ ++ +++ GG + +Q+ + G +++V T Sbjct 243 PTAVILAPTRELATQIYDEAK---KFTYRSWVKPMVVYGGASIDNQIKQMRYGCNLLVAT 299 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ ++L+ V++LVLDEAD +L G+ I R+ Q ++ Sbjct 300 PGRLTDLLERRYISLANVKYLVLDEADRMLDMGFEPQIRRIVEG--SDMPSVDNRQTLMF 357 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT S +++ L+ + ++ + S + + ++ V Sbjct 358 SATFPS-EIQHLASDFLKDYVFLSVGRVGSTSENITQKILYVE----------------- 399 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + + + +IF TK D+L + Sbjct 400 -----------------------DFDKNDTLLDLLAASNEGLTLIFVETKRAADSLTDFL 436 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I +G F +HGDR ER++ L FK G L+ T VAARG+DI V + Sbjct 437 IMEG---------FKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTH 487 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VIN LP++ +YVHRIGR GRA G+A + + V + S + Sbjct 488 VINFDLPNDIDDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEV 542 Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 47/112 (42%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ F + P + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 158 ISEFHSPPLDPLLLDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 217 Query 61 IQIVYETLKDQQEGKKGKTTIKT------GASVLNKWQMNPYDRGSAFAIGS 106 + + + G + IK + + YD F S Sbjct 218 LSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQIYDEAKKFTYRS 269 >sp|Q5L3G9|CSHA_GEOKA DEAD-box ATP-dependent RNA helicase CshA OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=cshA PE=3 SV=1 Length=467 Score = 322 bits (826), Expect = 3e-101, Method: Composition-based stats. Identities = 104/434 (24%), Positives = 189/434 (44%), Gaps = 70/434 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++LGL+ E+ ++ ++ + + ++ + ++ G Sbjct 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKD--------VIGQAQTGTGKTAA 55 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 G V + +A +AL+V P+RELA Q + + ++R L I GG Sbjct 56 F---GIPIVEKVNVKNSAVQALVVAPTRELAIQVSEELYKIGA---VKRVRVLPIYGGQD 109 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L+ ++VGTPGR+ D ++ G L L V +VLDEAD +L+ G+ + I + Sbjct 110 IERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAIL 169 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + +P Q ++ SAT+ +++++E+ M+ P V +K ++ + + V Sbjct 170 SHVPA------ERQTLLFSATMPDP-IRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEV 222 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K K + R + + Sbjct 223 HEKK----------------------------------------KFDILTRLLDIQAPEL 242 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AI+F RTK D L + +G ++ +HGD +R L +FK+G + Sbjct 243 AIVFGRTKRRVDELAEALNLRG---------YAAEGIHGDLSQAKRLSVLRKFKEGAIEI 293 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+A++ V + + Sbjct 294 LVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLH 353 Query 629 HVCSSRGKGCYNTR 642 H+ + + + Sbjct 354 HIERTTKRKMERMK 367 Score = 106 bits (265), Expect = 5e-23, Method: Composition-based stats. Identities = 30/104 (29%), Positives = 48/104 (46%), Gaps = 9/104 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ E+ +A+E M + T IQA++IPL L DV+ A+TG+GKT AF IP+ Sbjct 1 MTTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 ++ V K + + + + Sbjct 61 VEKV---------NVKNSAVQALVVAPTRELAIQVSEELYKIGA 95 >sp|A3GFV3|FAL1_PICST ATP-dependent RNA helicase FAL1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=FAL1 PE=3 SV=1 Length=399 Score = 320 bits (819), Expect = 3e-101, Method: Composition-based stats. Identities = 118/445 (27%), Positives = 183/445 (41%), Gaps = 73/445 (16%) Query 211 DLGLAF--EIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYI 266 D L F + ++K A F + LK LK + +G E + + D Sbjct 9 DNELEFSHKSTKNVKVHATFESMNLKPDLLKGIYGYGFEAPSAIQSRAIMQIINGRDTIA 68 Query 267 VKSQHSGNA------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 +G + +ALI+ P+RELA Q N +K Y++ + Sbjct 69 QAQSGTGKTATFSIGMLQAIDTNAKDCQALILSPTRELAVQIQNVVKHLGDYMN---IHT 125 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 IGG D + L+ G IV GTPGR+ D+V +L+ ++ L+LDEAD L ++G+ Sbjct 126 HACIGGTHVGDDIKKLKQGQQIVSGTPGRVVDMVKRQQLSTRNIKMLILDEADELFTKGF 185 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 + I ++ +P SATL S +V +++ K P + +K + + Sbjct 186 KEQIYEVYKYLPPSVQVVVV------SATL-SREVLEMTNKFTTDPVKILVKRDQITLEG 238 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + V + K + Sbjct 239 IKQYHVQCEKED---------------------------------------WKFDTLCDL 259 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + QA+IFC TK+ + L +Q F+ V +HGD K ER + Sbjct 260 YDNLTITQAVIFCNTKLKVNWLTDQMRKQ---------NFTVVSMHGDMKQDERDSIMND 310 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G+ R LI TDV ARGID+ V VIN LP +K+NY+HRIGR GR R G+AI+L+ Sbjct 311 FRTGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGVAINLIT 370 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKE 645 E Y+T+++E Sbjct 371 KEDVATLRDFEK-----YYSTKIRE 390 Score = 99.0 bits (245), Expect = 7e-21, Method: Composition-based stats. Identities = 24/102 (24%), Positives = 44/102 (43%), Gaps = 9/102 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F M + P++ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI ++ Sbjct 26 ATFESMNLKPDLLKGIYGYGFEAPSAIQSRAIMQIINGRDTIAQAQSGTGKTATFSIGML 85 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 Q + KD Q S + + + Sbjct 86 QAIDTNAKDCQ---------ALILSPTRELAVQIQNVVKHLG 118 >sp|Q2H720|DBP2_CHAGB ATP-dependent RNA helicase DBP2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP2 PE=3 SV=1 Length=562 Score = 325 bits (832), Expect = 5e-101, Method: Composition-based stats. Identities = 103/422 (24%), Positives = 177/422 (42%), Gaps = 65/422 (15%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K Q +++ V +++ G + + Sbjct 147 VMDEVKAQGFPAPTAIQSQGWPMALS--------GRDVVGIAETGSGKTLTYCLPAIVHI 198 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q I +F K + ++R + GGV Q Sbjct 199 NAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGK---SSRIRNTCVYGGVPKGPQTRD 255 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV++ + TPGRL D++ +G+ NL +V +LVLDEAD +L G+ I ++ QI Sbjct 256 LSRGVEVCIATPGRLIDMLESGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI---- 311 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD-TVHHVVVPVNPKTDR 454 Q + SAT +V+ L+ + V++ D + + VV VN R Sbjct 312 --RPDRQTCMWSATWPK-EVRALASDFLTDFIQVNIGSMDLAANHRITQVVEVVNESEKR 368 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 +M KI++ + ++ +IF Sbjct 369 ---------------------------DKMIKHLEKIMED--------KESQNKILIFTG 393 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK D + ++ Q G + + +HGD++ +ER L++FK G ++ TDV Sbjct 394 TKRVADEITRFLRQDG---------WPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDV 444 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 A+RGID+ + +V+N P+ ++Y+HRIGR GRA G AI+ T+ K + Sbjct 445 ASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARDLVGVL 504 Query 635 GK 636 + Sbjct 505 QE 506 Score = 100 bits (248), Expect = 1e-20, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 135 VETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA 194 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 195 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSS 236 >sp|Q8TFK8|DED1_CANGA ATP-dependent RNA helicase DED1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DED1 PE=3 SV=1 Length=617 Score = 326 bits (836), Expect = 5e-101, Method: Composition-based stats. Identities = 94/354 (27%), Positives = 154/354 (44%), Gaps = 55/354 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA Q + K K+ ++ ++ GG +Q+ +++G D++V T Sbjct 229 PTAVVMAPTRELATQIFDEAK---KFCYRSWVKPCVVYGGAPIGNQMREMDHGCDLLVAT 285 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ GK++LS V++LVLDEAD +L G+ I + Q ++ Sbjct 286 PGRLNDLLERGKVSLSNVKYLVLDEADRMLDMGFEPQIRHIVEDCD--MPPTGERQTLMF 343 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L+ +H ++ + S + + ++ V + Sbjct 344 SATFP-HDIQHLARDFLHDYIFLSVGRVGSTSENITQRILYVENRD-------------- 388 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + + + +IF TK D L + Sbjct 389 --------------------------KNSALLDLLAASNDNLTLIFVETKRMADQLTDFL 422 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q FS +HGDR ER++ L F+ G L+ T VAARG+DI V + Sbjct 423 IMQ---------NFSATAIHGDRSQAERERALAAFRSGRANILVATAVAARGLDIPNVTH 473 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 VIN LP + +YVHRIGR GRA G+A + + + + + Sbjct 474 VINYDLPSDVDDYVHRIGRTGRAGNTGVATAFFNRDNNNIVKGLYEILEEANQE 527 Score = 96.4 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 31/148 (21%), Positives = 58/148 (39%), Gaps = 17/148 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 144 ITEFTSPPLDSLLLENIKLARFTKPTPVQKYSVPIVSKGRDLMACAQTGSGKTGGFLFPV 203 Query 61 IQIVYETLKDQQEGKKGKT------TIKTGASVLNKWQMNPYDRGSAFAIGS-------- 106 + + T ++ G + + + +D F S Sbjct 204 LSESFLTGPAEKAANDGYSYQRKAFPTAVVMAPTRELATQIFDEAKKFCYRSWVKPCVVY 263 Query 107 DGLCCQSREVKEWHGC---RATKGLMKG 131 G ++ + HGC AT G + Sbjct 264 GGAPIGNQMREMDHGCDLLVATPGRLND 291 >sp|Q4IF76|DBP2_GIBZE ATP-dependent RNA helicase DBP2 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP2 PE=3 SV=2 Length=554 Score = 324 bits (831), Expect = 6e-101, Method: Composition-based stats. Identities = 107/424 (25%), Positives = 187/424 (44%), Gaps = 71/424 (17%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG----YIVKSQHSG 273 + +K Q +++ V +++ G Y + S Sbjct 147 VMDEVKAQGFPAPTAIQSQGWPMALS--------GRDVVGIAETGSGKTLTYCLPSIVHI 198 Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 NAQ + P L++ P+RELA Q +K+F + + ++R + GGV Q+ Sbjct 199 NAQPLLAPG--DGPIVLVLAPTRELAVQIQEEMKKFGR---SSRIRNTCVYGGVPKGPQI 253 Query 334 SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 L GV++ + TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ QI Sbjct 254 RDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI-- 311 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKT 452 Q ++ SAT +V+ L+ + V++ E + + +V Sbjct 312 ----RPDRQTLMWSATWPK-EVRALASDFLQDFIQVNIGSMELAANHRITQIV------- 359 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 E+ +E K + + + E+K ++ +IF Sbjct 360 ------------------------------EVVTEMEKRDRMIKHMEKVMENKENKILIF 389 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 TK D + ++ Q G + + +HGD++ +ER L++FK G ++ T Sbjct 390 VGTKRVADEITRFLRQDG---------WPALSIHGDKQQNERDWVLDQFKTGKSPIMVAT 440 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 DVA+RGID+ + +V+N P+ ++Y+HRIGR GRA MG AI+L T+ +K + + Sbjct 441 DVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVN 500 Query 633 SRGK 636 + Sbjct 501 VLQE 504 Score = 97.9 bits (242), Expect = 7e-20, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 43/106 (41%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ++ P+ L G DV+ AETGSGKT + +P Sbjct 135 VETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPS 194 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + + F S Sbjct 195 IVHI----NAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSS 236 >sp|Q4I7K4|DED1_GIBZE ATP-dependent RNA helicase DED1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DED1 PE=3 SV=1 Length=675 Score = 328 bits (840), Expect = 6e-101, Method: Composition-based stats. Identities = 98/374 (26%), Positives = 154/374 (41%), Gaps = 55/374 (15%) Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 S NA + P +LI+ P+REL Q + ++F +R ++ GG Sbjct 253 PSAVPANAAGQFGRQRKAYPTSLILAPTRELVSQIFDESRKFA---YRSWVRPCVVYGGA 309 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 QL +E G D++V TPGRL DL+ G+++L +++LVLDEAD +L G+ I R+ Sbjct 310 DIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIRRI 369 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + Q ++ SAT D++ L+ + ++ + S + + V Sbjct 370 VEG--EDMPQVQDRQTLMFSATFP-RDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEY 426 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H Sbjct 427 VE----------------------------------------DVDKRSVLLDILHSHANG 446 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +IF TK D+L + I Q F +HGDR ER++ LE F+ G Sbjct 447 LTLIFVETKRMADSLSDFLINQ---------NFPATSIHGDRTQRERERALEFFRNGRCP 497 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA G+A + + Sbjct 498 ILVATAVAARGLDIPHVTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGNRGIV 557 Query 628 YHVCSSRGKGCYNT 641 + + Sbjct 558 RELMDLLKEANQEV 571 Score = 91.7 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 8/111 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+ + + + +E + +PT +Q SIP++ GG D++ A+TGSGKTG F P++ Sbjct 188 FTTPPLDEHLCRNIELAHYKVPTPVQKYSIPIVSGGRDLMACAQTGSGKTGGFLFPILSQ 247 Query 64 VYETLKDQ-------QEGKKGKT-TIKTGASVLNKWQMNPYDRGSAFAIGS 106 + Q G++ K + + +D FA S Sbjct 248 AFINGPSAVPANAAGQFGRQRKAYPTSLILAPTRELVSQIFDESRKFAYRS 298 >sp|Q1DJF0|DED1_COCIM ATP-dependent RNA helicase DED1 OS=Coccidioides immitis (strain RS) OX=246410 GN=DED1 PE=3 SV=2 Length=665 Score = 327 bits (839), Expect = 8e-101, Method: Composition-based stats. Identities = 102/389 (26%), Positives = 161/389 (41%), Gaps = 57/389 (15%) Query 254 GFVALSKA-PDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 F LS+A +G + N Q + + P +LI+ P+REL Q + ++F Sbjct 236 LFPILSQAFKNGPSAVPTQNAN-QFSYGRQRKAYPTSLILAPTRELVSQIYDEARKFA-- 292 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 +R ++ GG QL +E G D++V TPGRL DL+ G+++L +++LVLDEA Sbjct 293 -YRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEA 351 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L G+ I R+ + Q ++ SAT D++ L+ + ++ + Sbjct 352 DRMLDMGFEPQIRRIVEG--EDMPPVNGRQTLMFSATFP-RDIQMLARDFLKDYVFLSVG 408 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 S + + V V R Sbjct 409 RVGSTSENITQKVEYVEDADKR-------------------------------------- 430 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 + + H +IF TK D+L ++ I Q F +HGDR Sbjct 431 --SVLLDILHTHGTGLTLIFVETKRMADSLSEFLINQ---------NFPATAIHGDRTQR 479 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER++ LE F+ G L+ T VAARG+DI V +V+N LP + +YVHRIGR GRA Sbjct 480 ERERALEYFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNT 539 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNT 641 GL+ + V + + Sbjct 540 GLSTAFFNRGNRGVVRDLIELLKEAHQEV 568 Score = 98.3 bits (243), Expect = 6e-20, Method: Composition-based stats. Identities = 25/116 (22%), Positives = 47/116 (41%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + ++ + PT +Q SIP+++GG D++ A+TGSGKTG F P+ Sbjct 180 VTTFTNPPLDDHLISNIKLATYKTPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPI 239 Query 61 IQIVYETLKDQQEG----------KKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++ ++ + + YD FA S Sbjct 240 LSQAFKNGPSAVPTQNANQFSYGRQRKAYPTSLILAPTRELVSQIYDEARKFAYRS 295 >sp|Q2UGK3|DED1_ASPOR ATP-dependent RNA helicase ded1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=ded1 PE=3 SV=1 Length=675 Score = 327 bits (839), Expect = 9e-101, Method: Composition-based stats. Identities = 100/388 (26%), Positives = 161/388 (41%), Gaps = 54/388 (14%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 F LS+A + + Q + + P +LI+ P+REL Q + ++F Sbjct 241 LFPILSQAFQNGPSPTPAPASGQFSYGRQRKAYPTSLILAPTRELVSQIFDEARKFA--- 297 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 +R ++ GG QL +E G D++V TPGRL DL+ G+++L +++L+LDEAD Sbjct 298 YRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEAD 357 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 +L G+ I R+ + Q ++ SAT D++ L+ + ++ + Sbjct 358 RMLDMGFEPQIRRIVEG--EDMPHVNDRQTLMFSATFP-RDIQMLARDFLKDYVFLSVGR 414 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 S + + V V R + D +H + Sbjct 415 VGSTSENITQKVEYVEDHDKR--------SVLLDILHTHGTSGL---------------- 450 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +IF TK D+L + + Q +F +HGDR E Sbjct 451 ---------------TLIFVETKRMADSLSDFLLNQ---------RFPATAIHGDRTQRE 486 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R++ LE F+ G L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA G Sbjct 487 RERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTG 546 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNT 641 +A + V + + Sbjct 547 IATAFFNRGNRGVVRDLIDLLKEAHQEV 574 Score = 97.1 bits (240), Expect = 1e-19, Method: Composition-based stats. Identities = 24/116 (21%), Positives = 45/116 (39%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + + + + PT +Q SIP+++ G D++ A+TGSGKTG F P+ Sbjct 185 VNAFTNPPLDDHLIANITLAHYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPI 244 Query 61 IQIVYETLKDQQEGK----------KGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++ + + + +D FA S Sbjct 245 LSQAFQNGPSPTPAPASGQFSYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 300 >sp|A4RHF1|DED1_PYRO7 ATP-dependent RNA helicase DED1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DED1 PE=3 SV=2 Length=671 Score = 327 bits (837), Expect = 1e-100, Method: Composition-based stats. Identities = 100/378 (26%), Positives = 161/378 (43%), Gaps = 60/378 (16%) Query 246 EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNN 305 F FP A P +Q G + + P +LI+ P+REL Q + Sbjct 240 GFLFPILSQ--AFKTGPSPIPATNQGPGGYGRQRKAY----PTSLILAPTRELVSQIYDE 293 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++F +R ++ GG QL +E G D++V TPGRL DL+ G+++L ++ Sbjct 294 SRKFA---YRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLCNIK 350 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 +LVLDEAD +L G+ I R+ + + + Q ++ SAT + +++L+ + Sbjct 351 YLVLDEADRMLDMGFEPQIRRIVEG--EDMPNVQDRQTLMFSATFPGY-IQQLARDFLKD 407 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 ++ + S + + V+ V + D++ L Sbjct 408 YIFLSVGRVGSTSENITQRVMEVKHRDDKISHLL-------------------------- 441 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + H +IF TK + D L + Q + Sbjct 442 -------------DLLSTHGGGLTLIFVETKRNADELSDFLQNQ---------NLPATSI 479 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HGDR ER++ LE F+ G L+ T VAARG+DI V +VIN LP + +YVHRIGR Sbjct 480 HGDRTQRERERALEMFRTGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGR 539 Query 606 VGRAERMGLAISLVATEK 623 GRA G+A + + Sbjct 540 TGRAGNTGIATAFFDMKD 557 Score = 97.9 bits (242), Expect = 8e-20, Method: Composition-based stats. Identities = 62/391 (16%), Positives = 120/391 (31%), Gaps = 81/391 (21%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + + +E + +PT +Q S+P+++GG D++ A+TGSGKTG F P++ Sbjct 188 TFSNPPLDDHLISNIELARYKVPTPVQKYSVPIVMGGRDLMACAQTGSGKTGGFLFPILS 247 Query 63 IVYETLKDQQEG----------KKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS------ 106 ++T ++ + + YD FA S Sbjct 248 QAFKTGPSPIPATNQGPGGYGRQRKAYPTSLILAPTRELVSQIYDESRKFAYRSWVRPCV 307 Query 107 --DGLCCQSREVKEWHGC---RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTD 161 G S+ + GC AT G + V ++G R+ ++ + Sbjct 308 VYGGADIGSQLRQIERGCDLLVATPGRL-------VDLIERG--RISLCNIKYLVL---- 354 Query 162 KFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPH 221 + + F+ + D+ + + Sbjct 355 -------DEADRMLDMGFEPQIRRIVEGE------DMPNVQDRQTLMF------------ 389 Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTK 281 A FP + + F + G + + VK + + + Sbjct 390 ---SATFP--GYIQQLARDFLKDYIFLSVGRVGSTSENITQRVMEVKHRDDKISHLLDLL 444 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--- 338 LI ++ N + ++ N L I G R++ LE Sbjct 445 STHGGGLTLIFVETK-------RNADELSDFLQNQNLPATSIHGDRTQRERERALEMFRT 497 Query 339 -GVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 I+V T V+ L++ V ++ Sbjct 498 GRCPILVAT------AVAARGLDIPNVTHVI 522 >sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0197200 PE=3 SV=2 Length=494 Score = 321 bits (823), Expect = 2e-100, Method: Composition-based stats. Identities = 104/441 (24%), Positives = 171/441 (39%), Gaps = 69/441 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 + +D+G + + +++ + +++ G Sbjct 91 REFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMAL--------RGRDLIGIAETGSGKT 142 Query 267 VKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + V L + P L++ P+RELA Q +F + K++ I Sbjct 143 LAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGA---SSKIKSTCIY 199 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GGV Q+ L+ GV+IV+ TPGRL D++ + NL +V +LVLDEAD +L G+ I Sbjct 200 GGVPKGPQVRDLQKGVEIVIATPGRLIDMIESHHTNLRRVTYLVLDEADRMLDMGFEPQI 259 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHH 443 ++ +QI Q + SAT +V++L+ + P V + E+ + Sbjct 260 KKIVSQI------RPDRQTLYWSATWPK-EVEQLARNFLFDPYKVIIGSEELKANHAISQ 312 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V E+ SE+ K K + I + Sbjct 313 HV-------------------------------------EILSESQKYNKLVNLLEDIMD 335 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + +IF TK CD + + G + + +HGD+ ER L FK Sbjct 336 --GSRILIFMDTKKGCDQITRQLRMDG---------WPALSIHGDKSQAERDWVLSEFKS 384 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G + TDVAARG+D+ V YVIN P ++YVHRIGR GRA G A + Sbjct 385 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAAN 444 Query 624 EKVWYHVCSSRGKGCYNTRLK 644 + + + + + Sbjct 445 ARFAKDLINILEEAGQKVSPE 465 Score = 103 bits (257), Expect = 7e-22, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 47/107 (44%), Gaps = 4/107 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F ++G + Q + + ++ PT IQ++ P+ L G D++ AETGSGKT A+ +P Sbjct 90 VREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPA 149 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 I V Q G I + + + + F S Sbjct 150 IVHV----NAQPILAPGDGPIVLVLAPTRELAVQIQQEATKFGASSK 192 >sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana OX=3702 GN=RH20 PE=2 SV=1 Length=501 Score = 321 bits (823), Expect = 2e-100, Method: Composition-based stats. Identities = 101/440 (23%), Positives = 172/440 (39%), Gaps = 67/440 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ +D+G + +K +++ + +++ G Sbjct 99 KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAM--------KGRDLIGIAETGSGKT 150 Query 267 VKSQHSGNAQVTQTKFLPNA--PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + V L + P L++ P+RELA Q K+ + K++ I Sbjct 151 LSYLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEA---SKFGSSSKIKTTCIY 207 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GGV Q+ L+ GV+IV+ TPGRL D++ + NL +V +LVLDEAD +L G+ I Sbjct 208 GGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQI 267 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ + I Q + SAT +V++LS+K ++ P V + D + Sbjct 268 RKIVSHI------RPDRQTLYWSATWPK-EVEQLSKKFLYNPYKVIIGSSDLKANRAIRQ 320 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 +V V ++ + + + D Sbjct 321 IVDVISESQKYNKLVKLLEDIMD------------------------------------- 343 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + ++F TK CD + + G + + +HGD+ ER L F+ G Sbjct 344 -GSRILVFLDTKKGCDQITRQLRMDG---------WPALSIHGDKSQAERDWVLSEFRSG 393 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + TDVAARG+D+ V YVIN P ++YVHRIGR GRA G A + Sbjct 394 KSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANA 453 Query 625 KVWYHVCSSRGKGCYNTRLK 644 + + + + + Sbjct 454 RFAKELTNILQEAGQKVSPE 473 Score = 104 bits (258), Expect = 5e-22, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 48/107 (45%), Gaps = 4/107 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++G + + V++ + PT IQ++ P+ + G D++ AETGSGKT ++ +P Sbjct 98 VKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPA 157 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 I V Q G I + + + S F S Sbjct 158 IVHV----NAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSK 200 >sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana OX=3702 GN=RH30 PE=1 SV=2 Length=591 Score = 324 bits (831), Expect = 2e-100, Method: Composition-based stats. Identities = 100/433 (23%), Positives = 168/433 (39%), Gaps = 69/433 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K +D I + ++ + +++ G Sbjct 165 KMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMAL--------KGRDLIGIAETGSGKT 216 Query 267 VKSQHSGNAQVTQTKFL--PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + V+ L + P LI+ P+RELA Q ++F +R I Sbjct 217 LAYLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFG---LRSGVRSTCIY 273 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG Q+ L GV+IV+ TPGRL D++ NL +V +LVLDEAD +L G+ I Sbjct 274 GGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQI 333 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHH 443 ++ +QI Q ++ SAT +V+ L+ + + P + D +++ Sbjct 334 RKIVSQI------RPDRQTLLWSATWP-REVETLARQFLRDPYKAIIGSTDLKANQSINQ 386 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V+ V +PE ++ + +LK Sbjct 387 VIEIVP-------------------------------TPEKYNRLLTLLKQL-------- 407 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + +IF TK CD + + G + + +HGD+ ER + L FK Sbjct 408 MDGSKILIFVETKRGCDQVTRQLRMDG---------WPALAIHGDKTQSERDRVLAEFKS 458 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G + TDVAARG+D+ + V+N P+ ++Y+HRIGR GRA G+A + + Sbjct 459 GRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDN 518 Query 624 EKVWYHVCSSRGK 636 K + + Sbjct 519 AKFARELVKILQE 531 Score = 109 bits (272), Expect = 1e-23, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 9/143 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F + I +A+ ++ + PT IQA+ P+ L G D++ AETGSGKT A+ +P Sbjct 164 MKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 223 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 + V + Q+ I + + + + F GL R + Sbjct 224 LVHVSAQPRLGQDD----GPIVLILAPTRELAVQIQEESRKF-----GLRSGVRSTCIYG 274 Query 121 GCRATKGLMKGKHYYEVSCHDQG 143 G + + E+ G Sbjct 275 GAPKGPQIRDLRRGVEIVIATPG 297 >sp|P24346|DDX3_XENLA Putative ATP-dependent RNA helicase an3 OS=Xenopus laevis OX=8355 GN=an3 PE=2 SV=1 Length=697 Score = 327 bits (837), Expect = 3e-100, Method: Composition-based stats. Identities = 141/654 (22%), Positives = 229/654 (35%), Gaps = 125/654 (19%) Query 44 MAAETGSGKTGAFSIPVIQIVYETLKDQQE---GKKGKTTIKTGASVLNKWQMNPYDRGS 100 AE+G T IP E ++ G+ G I G +MN YDRG Sbjct 24 ADAESGVAGTKGRYIPPHLRNKEASRNDSNWDSGRGGNGYIN-GMQDDRDGRMNGYDRGG 82 Query 101 AFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 GS G R + G K + S D+G + ++ + Sbjct 83 Y---GSRGTGRSDRGFYDRENSGWNSGRDKDAYSSFGSRGDRGKGSL-FNERGSGSRRTD 138 Query 161 DKFGFGFGGTGKKSHNKQF-----------------DNYGEEFTMHDTIGCYLDIDKGHV 203 D+ GF G G +S F D++ + +D + + + Sbjct 139 DRRQDGFDGMGNRSDKSGFGRFDRGNSRWSDDRNDEDDWSKPLAPNDRV-------EQEL 191 Query 204 KFSKNGKDLGLAFE----IPPHMKNQALFPAC-----------VLKNAELKFNFGEEE-- 246 +G + G+ FE IP P ++ N +L Sbjct 192 F---SGSNTGINFEKYDDIPVEATGSNCPPHIESFHDVTMGEIIMGNIQLTRYTRPTPVQ 248 Query 247 ----FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF---------------LPNAP 287 K +A ++ G +Q+ P Sbjct 249 KHAIPIIIEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGRYGRRKQFP 308 Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +L++ P+RELA Q ++F ++R ++ GG Q+ LE G ++V TP Sbjct 309 LSLVLAPTRELAVQIYEEARKFA---YRSRVRPCVVYGGADIGQQIRDLERGCHLLVATP 365 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL D++ GK+ L ++LVLDEAD +L G+ I R+ Q Q ++ S Sbjct 366 GRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ--DTMPPKGVRQTMMFS 423 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT +++ L+ + ++ + S + + VV V R + Sbjct 424 ATFPK-EIQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEEMDKRSF----------- 471 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 K ++F TK D LE + Sbjct 472 ----------------------------LLDLLNATGKDSLTLVFVETKKGADALEDFLY 503 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V +V Sbjct 504 HEG---------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHV 554 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 IN LP + + YVHRIGR GR +GLA S + + + + Sbjct 555 INFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEV 608 Score = 102 bits (255), Expect = 2e-21, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 133/394 (34%), Gaps = 84/394 (21%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++ + I ++ + PT +Q +IP+I+ D++ A+TGSGKT AF +P+ Sbjct 220 IESFHDVTMGEIIMGNIQLTRYTRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPI 279 Query 61 IQIVY-----ETLKDQQE----GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS----- 106 + +Y + +K QE G++ + + + + + Y+ FA S Sbjct 280 LSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRPC 339 Query 107 -----DGLCCQSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 + Q R+++ H AT G + V ++G ++G + Sbjct 340 VVYGGADIGQQIRDLERGCHLLVATPGRL-------VDMMERG--KIG--LDFCKYLVLD 388 Query 161 DKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPP 220 + + + F+ DT+ P Sbjct 389 EAD---------RMLDMGFEPQIRRIVEQDTM-------------------------PPK 414 Query 221 HMKNQALFPACVLKNAEL--KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 ++ +F A K ++ + E F + G + + V+ + + Sbjct 415 GVRQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEEMDKRSFLLD 474 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 L+ ++ + ++ + I G + RD+ L Sbjct 475 LLNATGKDSLTLVFVETK-------KGADALEDFLYHEGYACTSIHGDRSQRDREEALHQ 527 Query 339 ----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 I+V T V+ L++S V+ ++ Sbjct 528 FRSGKSPILVAT------AVAARGLDISNVKHVI 555 >sp|A7EML8|RRP3_SCLS1 ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=rrp3 PE=3 SV=1 Length=482 Score = 320 bits (820), Expect = 3e-100, Method: Composition-based stats. Identities = 109/503 (22%), Positives = 190/503 (38%), Gaps = 81/503 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K+ KDLG+ + ++ + + L++ G Sbjct 55 TKSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLAL--------QGRDLIGLAETGSGK 106 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + P L++ P+RELA Q + + I +++ +I+G Sbjct 107 TAAFALPI---LQSLLDKPQPLFGLVLAPTRELAYQISQSFEALGSII---RVKCAVIVG 160 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ Q L I+V TPGRL D + +T +L +++LV+DEAD LL + + Sbjct 161 GMDMVPQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPIL 220 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 +++ +P + + + SAT+ S V+ L + P V + Sbjct 221 DKILKVLP------RERRTYLFSATI-SSKVESLQRASLKDPLRVSI------------- 260 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + L +++I VH K Y + + E Sbjct 261 ----SSNKYQTVSTLIQNYIFIPLVH----------------------KDTYLIYLLNEF 294 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 AIIF RT + + G F + LHG R L +F+ G Sbjct 295 AGQSAIIFTRTVNETQRIAILLRTLG---------FGAIPLHGQLSQSSRLGALNKFRAG 345 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V V+N +P + + Y+HR+GR RA + G AIS V Sbjct 346 SREILVATDVAARGLDIPSVDVVLNYDMPQDSKTYIHRVGRTARAGKSGHAISFVTQYDV 405 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 ++W + ++ GK + +D + E + H + + D Sbjct 406 EIWMRIEAALGKKQEEYQTVKDEVMVF----KPRVEEAQRHARNEMKNLHED-----RGK 456 Query 685 DGKVTYGQKRAAGGGSYKGHVDI 707 G V G++ A G + +G ++ Sbjct 457 KGAVLKGRRPANG--AKRGRDEM 477 Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats. Identities = 28/94 (30%), Positives = 49/94 (52%), Gaps = 9/94 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G++ + +A + + + PT IQ ESIPL L G D++ AETGSGKT AF++P++ Sbjct 56 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 115 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 Q + + K + + + Sbjct 116 QSLLD---------KPQPLFGLVLAPTRELAYQI 140 >sp|Q755W0|FAL1_EREGS ATP-dependent RNA helicase FAL1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=FAL1 PE=3 SV=2 Length=398 Score = 317 bits (811), Expect = 4e-100, Method: Composition-based stats. Identities = 109/441 (25%), Positives = 183/441 (41%), Gaps = 71/441 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + F +N +D L + + F + L+ L+ +G F+ P A+++ Sbjct 1 MSFDRN-QDGKLKVKTSSKLPVSPTFESMKLQENLLRGIYGY-GFEAPSAIQSRAITQII 58 Query 263 DGY-IVKSQHSGNAQ--------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G ++ SG + + +AL++ P+RELA Q ++ Y+ Sbjct 59 RGKDVIAQAQSGTGKTATFTIGMLQVIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYM 118 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 + + L GG A + +S + G ++ GTPGR+ D++ +N V+ LVLDEAD Sbjct 119 N---VVALACTGGKALQQDISKVNKGCHVMSGTPGRVLDMIKRRIINTRHVKMLVLDEAD 175 Query 374 GLLS--QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 LLS G+ + + ++P AT+ S DV ++++K M P + + Sbjct 176 ELLSETLGFKQQLYDIFTKLPSSVQVVVVS------ATM-SKDVLEVTKKFMSDPVKILV 228 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 K ++ + + + V+ + Sbjct 229 KRDEVSLEGIKQYHINVDKEE--------------------------------------- 249 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + Q +IFC TK D L IQ + F+ +HGD K Sbjct 250 WKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSHKLIQ---------NNFAVASIHGDMKQ 300 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + + F+ G R LI TDV ARGID+ V VIN LP+ +NY+HRIGR GR R Sbjct 301 DDRDKVMSDFRSGSSRVLISTDVWARGIDVQQVSLVINYDLPELLENYIHRIGRSGRFGR 360 Query 612 MGLAISLVATEKEKVWYHVCS 632 G+AI+ + E+ + Sbjct 361 KGVAINFITREEVTKLKSIEK 381 Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 2/128 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++Q Sbjct 24 TFESMKLQENLLRGIYGYGFEAPSAIQSRAITQIIRGKDVIAQAQSGTGKTATFTIGMLQ 83 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV--KEWH 120 ++ + KD Q T + Y A A Q K H Sbjct 84 VIDSSSKDLQALVLSPTRELAAQISQVVRNLGDYMNVVALACTGGKALQQDISKVNKGCH 143 Query 121 GCRATKGL 128 T G Sbjct 144 VMSGTPGR 151 >sp|P24784|DBP1_YEAST ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP1 PE=1 SV=2 Length=617 Score = 324 bits (830), Expect = 4e-100, Method: Composition-based stats. Identities = 92/355 (26%), Positives = 152/355 (43%), Gaps = 55/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+RELA Q + K+ +R ++ GG +Q+ ++ G D++V T Sbjct 238 PSALVLAPTRELATQIFEEAR---KFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVAT 294 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ GK++L+ +++LVLDEAD +L G+ I + + + Q ++ Sbjct 295 PGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECD--MPSVENRQTLMF 352 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L+ + ++ + S + + ++ V+ Sbjct 353 SATFP-VDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVD----------------- 394 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + K + + +IF TK D L + Sbjct 395 -----------------------DMDKKSALLDLLSAEHKGLTLIFVETKRMADQLTDFL 431 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q F +HGDR ER++ L FK L+ T VAARG+DI V + Sbjct 432 IMQ---------NFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTH 482 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VIN LP + +YVHRIGR GRA G+A S + + + + + Sbjct 483 VINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEV 537 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 23/112 (21%), Positives = 45/112 (40%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS + + + ++ + PT +Q SIP++ G D++ A+TGSGKTG F P+ Sbjct 153 ILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPL 212 Query 61 IQIVYETLKDQQEGK------KGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 ++ + K + + + ++ F S Sbjct 213 FTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRS 264 >sp|A6ZWD3|DBP1_YEAS7 ATP-dependent RNA helicase DBP1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP1 PE=3 SV=1 Length=617 Score = 324 bits (830), Expect = 4e-100, Method: Composition-based stats. Identities = 92/355 (26%), Positives = 152/355 (43%), Gaps = 55/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+RELA Q + K+ +R ++ GG +Q+ ++ G D++V T Sbjct 238 PSALVLAPTRELATQIFEEAR---KFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVAT 294 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ GK++L+ +++LVLDEAD +L G+ I + + + Q ++ Sbjct 295 PGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECD--MPSVENRQTLMF 352 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L+ + ++ + S + + ++ V+ Sbjct 353 SATFP-VDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVD----------------- 394 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + K + + +IF TK D L + Sbjct 395 -----------------------DMDKKSALLDLLSAEHKGLTLIFVETKRMADQLTDFL 431 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q F +HGDR ER++ L FK L+ T VAARG+DI V + Sbjct 432 IMQ---------NFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTH 482 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VIN LP + +YVHRIGR GRA G+A S + + + + + Sbjct 483 VINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEV 537 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 23/112 (21%), Positives = 45/112 (40%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS + + + ++ + PT +Q SIP++ G D++ A+TGSGKTG F P+ Sbjct 153 ILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPL 212 Query 61 IQIVYETLKDQQEGK------KGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 ++ + K + + + ++ F S Sbjct 213 FTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRS 264 >sp|A5DWJ1|FAL1_LODEL ATP-dependent RNA helicase FAL1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=FAL1 PE=3 SV=1 Length=399 Score = 317 bits (811), Expect = 4e-100, Method: Composition-based stats. Identities = 117/450 (26%), Positives = 185/450 (41%), Gaps = 73/450 (16%) Query 211 DLGLAF--EIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYI 266 D L F + +K F + LK LK + +G E + + D Sbjct 9 DNELEFSHKSTKGVKVHRTFESMRLKPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIA 68 Query 267 VKSQHSGNA------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 +G + +AL++ P+RELA Q N IK Y++ ++ Sbjct 69 QAQSGTGKTATFSIGMLEVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYMN---IQT 125 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 IGG + L+ G IV GTPGR+ D++ L+ ++ L+LDEAD L ++G+ Sbjct 126 YACIGGKNVGTDIKRLQQGQQIVSGTPGRVLDVIKRRNLSTRHIKMLILDEADELFTKGF 185 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 + I ++ +P +QV+V SATL + +V +++ K P + +K E+ Sbjct 186 KEQIYEIYKHLP------PGVQVVVVSATL-THEVLEMTGKFTTDPVKILVKREEVSLSG 238 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + + + K + Sbjct 239 IKQYYIQCEKED---------------------------------------WKFDTLCDL 259 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + QA+IFC TKI + L +Q F+ V +HGD K ER + Sbjct 260 YDNLTITQAVIFCNTKIKVNWLTDQMRKQ---------NFTVVAMHGDMKQEERDAIMND 310 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G+ R LI TDV ARGID+ + VIN LP +K+NY+HRIGR GR R G AI+L+ Sbjct 311 FRSGNSRVLISTDVWARGIDVQQISLVINYDLPLDKENYIHRIGRSGRFGRKGTAINLLT 370 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 + + Y+T++KE Sbjct 371 KSD-----TIELKALEKYYSTKIKEMPSNV 395 Score = 95.6 bits (236), Expect = 1e-19, Method: Composition-based stats. Identities = 24/102 (24%), Positives = 45/102 (44%), Gaps = 0/102 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F M + PE+ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI ++ Sbjct 26 RTFESMRLKPELLKGIYAYGFEAPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGML 85 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +++ K+ Q T + Y +A Sbjct 86 EVLDSKSKECQALVLSPTRELATQIQNVIKHLGDYMNIQTYA 127 >sp|P06634|DED1_YEAST ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DED1 PE=1 SV=2 Length=604 Score = 324 bits (829), Expect = 5e-100, Method: Composition-based stats. Identities = 110/434 (25%), Positives = 167/434 (38%), Gaps = 86/434 (20%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 NG+DL + LFP L +F P G KA Sbjct 178 NGRDLMACAQTGSGKTGGFLFPV-------LSESFKTGPSPQPESQGSFYQRKA------ 224 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 P A+I+ P+RELA Q + K K+ ++ ++ GG Sbjct 225 ------------------YPTAVIMAPTRELATQIFDEAK---KFTYRSWVKACVVYGGS 263 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 +QL +E G D++V TPGRL+DL+ GK++L+ V++LVLDEAD +L G+ I + Sbjct 264 PIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHI 323 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 Q ++ SAT D++ L+ + ++ + S + + V+ Sbjct 324 VEDCDMTPVG--ERQTLMFSATFP-ADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLY 380 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + Sbjct 381 VENQD----------------------------------------KKSALLDLLSASTDG 400 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +IF TK D L + I Q F +HGDR ER++ L F+ G Sbjct 401 LTLIFVETKRMADQLTDFLIMQ---------NFRATAIHGDRTQSERERALAAFRSGAAT 451 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA GLA + +E + Sbjct 452 LLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIV 511 Query 628 YHVCSSRGKGCYNT 641 + + Sbjct 512 KGLHEILTEANQEV 525 Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 49/112 (44%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 141 ITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPV 200 Query 61 IQIVYETLKDQQEGKKG---KTTIKTGASV---LNKWQMNPYDRGSAFAIGS 106 + ++T Q +G + A + + +D F S Sbjct 201 LSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRS 252 >sp|A6ZP47|DED1_YEAS7 ATP-dependent RNA helicase DED1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DED1 PE=3 SV=1 Length=604 Score = 324 bits (829), Expect = 5e-100, Method: Composition-based stats. Identities = 110/434 (25%), Positives = 167/434 (38%), Gaps = 86/434 (20%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 NG+DL + LFP L +F P G KA Sbjct 178 NGRDLMACAQTGSGKTGGFLFPV-------LSESFKTGPSPQPESQGSFYQRKA------ 224 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 P A+I+ P+RELA Q + K K+ ++ ++ GG Sbjct 225 ------------------YPTAVIMAPTRELATQIFDEAK---KFTYRSWVKACVVYGGS 263 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 +QL +E G D++V TPGRL+DL+ GK++L+ V++LVLDEAD +L G+ I + Sbjct 264 PIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHI 323 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 Q ++ SAT D++ L+ + ++ + S + + V+ Sbjct 324 VEDCDMTPVG--ERQTLMFSATFP-ADIQHLARDFLSDYIFLSVGRVGSTSENITQKVLY 380 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + Sbjct 381 VENQD----------------------------------------KKSALLDLLSASTDG 400 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +IF TK D L + I Q F +HGDR ER++ L F+ G Sbjct 401 LTLIFVETKRMADQLTDFLIMQ---------NFRATAIHGDRTQSERERALAAFRSGAAT 451 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA GLA + +E + Sbjct 452 LLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIV 511 Query 628 YHVCSSRGKGCYNT 641 + + Sbjct 512 KGLHEILTEANQEV 525 Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 49/112 (44%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 141 ITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPV 200 Query 61 IQIVYETLKDQQEGKKG---KTTIKTGASV---LNKWQMNPYDRGSAFAIGS 106 + ++T Q +G + A + + +D F S Sbjct 201 LSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRS 252 >sp|Q75B50|DED1_EREGS ATP-dependent RNA helicase DED1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DED1 PE=3 SV=2 Length=623 Score = 324 bits (830), Expect = 5e-100, Method: Composition-based stats. Identities = 97/355 (27%), Positives = 151/355 (43%), Gaps = 55/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P A+++ P+RELA Q + K K+ ++ ++ GG R Q+ LE G D++V T Sbjct 229 PTAVVLAPTRELATQIFDEAK---KFTYRSWVKPCVVYGGADIRQQIRELERGCDLIVAT 285 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ GK++L V++LVLDEAD +L G+ I + + Q ++ Sbjct 286 PGRLNDLLERGKISLCSVKYLVLDEADRMLDMGFEPQIRHIVEGCD--MPTVENRQTLMF 343 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT + D++ L+ + ++ + S + + V+ V Sbjct 344 SATFPT-DIQHLAADFLKDYIFLSVGRVGSTSENITQKVLHVE----------------- 385 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 I K + + ++F TK D L + Sbjct 386 -----------------------DIDKRSVLLDLLAASDGGLTLVFVETKRMADALTDFL 422 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q S +HGDR ER++ L F+ G L+ T VAARG+DI V + Sbjct 423 IMQ---------NLSATAIHGDRTQAERERALAFFRTGRANVLVATAVAARGLDIPNVTH 473 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VIN LP + +YVHRIGR GRA GLA + + V + + Sbjct 474 VINYDLPSDIDDYVHRIGRTGRAGNTGLATAFFNRGNKNVVKELVDILEEANQEV 528 Score = 99.4 bits (246), Expect = 2e-20, Method: Composition-based stats. Identities = 23/111 (21%), Positives = 44/111 (40%), Gaps = 5/111 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 145 ITEFTSPPLDELLLENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTGSGKTGGFLFPV 204 Query 61 IQIVYETLKDQQEGKKG-----KTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + + G + + +D F S Sbjct 205 LSQSFSNGPASTPDESGYYMRKAYPTAVVLAPTRELATQIFDEAKKFTYRS 255 >sp|Q9LYJ9|RH46_ARATH DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana OX=3702 GN=RH46 PE=2 SV=2 Length=645 Score = 325 bits (832), Expect = 5e-100, Method: Composition-based stats. Identities = 122/514 (24%), Positives = 205/514 (40%), Gaps = 96/514 (19%) Query 153 QASLDLGTDKFGFGFGGTGKKSHNKQ-FDNYGE--EFTMHDTIGCYLDIDKGHVK----- 204 + + G + +G G G KS + F+ G + +D + G Sbjct 71 SSGFNSGKEDDKYGRGSDGPKSDSGSRFNEAGRTGPISSNDAASGLGNASSGGSSARGPP 130 Query 205 ------------FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFG--------- 243 + + + ++PP + + F A L N L+ + Sbjct 131 SSAAGNELSPEAYCRKHEITVSGGQVPPPLMS---FEATGLPNELLREVYSAGFSAPSPI 187 Query 244 --EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAE 300 + VA++K G + G + + P L++ P+RELA Sbjct 188 QAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPTILVLSPTRELAT 247 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q +F K + K+ + GG QL +E GVDIVV TPGRL+D++ +++ Sbjct 248 QIQVEALKFGK---SSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRIS 304 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 L QV +LVLDEAD +L G+ I ++ N++P + Q ++ +AT +V+K++ Sbjct 305 LHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPT------KRQTLMYTATWPK-EVRKIAA 357 Query 421 KIMHFPTWVDLKGEDSVP--DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 ++ P V++ D + ++ + + P Sbjct 358 DLLVNPAQVNIGNVDELVANKSITQTIEVLAPM--------------------------- 390 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 E S +IL+ + + IIFC TK CD L + + Sbjct 391 ----EKHSRLEQILRS--------QEPGSKIIIFCSTKRMCDQLARNLTR---------- 428 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 F +HGD+ ER L +F+ G L+ TDVAARG+D+ + V+N P+ ++ Sbjct 429 TFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVED 488 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 YVHRIGR GRA GLA + + K + Sbjct 489 YVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIK 522 Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 56/373 (15%), Positives = 122/373 (33%), Gaps = 59/373 (16%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F G+ E+ + V + P+ IQA+S P+ + D++ A+TGSGKT + IP Sbjct 160 LMSFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPG 219 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCCQSREVKEW 119 + D + G S + F S C + Sbjct 220 FMHLQRIHNDSRMG-----PTILVLSPTRELATQIQVEALKFGKSSKISCACL------Y 268 Query 120 HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQF 179 G L + + ++ G + SL + + + + F Sbjct 269 GGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISL----HQVSYLVLDEADRMLDMGF 324 Query 180 DNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELK 239 + + + + + ++ P ++ A +L N + Sbjct 325 EPQIRKIVNE------VPTKRQTLMYT---------ATWPKEVRK---IAADLLVNPA-Q 365 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELA 299 N G ++++ + +HS Q+ +++ K +I ++ + Sbjct 366 VNIGN----VDELVANKSITQTIEVLAPMEKHSRLEQILRSQE--PGSKIIIFCSTKRMC 419 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGTPGRLDDLVS 355 +Q N+ + I G + ++ VL ++V T D+ + Sbjct 420 DQLARNLTR--------TFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVAT-----DVAA 466 Query 356 TGKLNLSQVRFLV 368 G L++ +R +V Sbjct 467 RG-LDVKDIRVVV 478 >sp|Q0UWA6|DED1_PHANO ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DED1 PE=3 SV=1 Length=696 Score = 326 bits (835), Expect = 7e-100, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 160/404 (40%), Gaps = 69/404 (17%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------------PKALIVEPSRE 297 +A ++ G AQ Q P P +LI+ P+RE Sbjct 238 GRDLMACAQTGSGKTGGFLFPILAQAFQNGPSPPPTAQAGGYGRQRKAYPTSLILAPTRE 297 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG 357 L Q + ++F +R ++ GG QL +E G D++V TPGRL DL+ G Sbjct 298 LVSQIFDEARKFA---YRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERG 354 Query 358 KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKK 417 +++L+ +++LVLDEAD +L G+ I R+ + Q ++ SAT D++ Sbjct 355 RISLASIKYLVLDEADRMLDMGFEPQIRRIVEG--EDMPPTAGRQTLMFSATFP-RDIQM 411 Query 418 LSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 L+ + ++ + S + + + V R Sbjct 412 LARDFLKEYIFLSVGRVGSTSENITQKIEYVEDADKR----------------------- 448 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 + + H ++IF TK D+L + I QG Sbjct 449 -----------------SVLLDILHTHGAGLSLIFVETKRMADSLSDFLINQG------- 484 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 F +HGDR ER++ LE F+ G L+ T VAARG+DI V +V+N LP + Sbjct 485 --FPATSIHGDRTQREREKALEMFRSGRCPILVATAVAARGLDIPNVTHVVNYDLPTDID 542 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 +YVHRIGR GRA G+A + V + + Sbjct 543 DYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLLDLLKEANQEV 586 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 25/114 (22%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + +E + +PT +Q SIP+++GG D++ A+TGSGKTG F P+ Sbjct 200 VTRFTNPPLDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPI 259 Query 61 IQIVYETLKDQQEG--------KKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++ ++ + + +D FA S Sbjct 260 LAQAFQNGPSPPPTAQAGGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 313 >sp|Q61656|DDX5_MOUSE Probable ATP-dependent RNA helicase DDX5 OS=Mus musculus OX=10090 GN=Ddx5 PE=1 SV=2 Length=614 Score = 323 bits (828), Expect = 9e-100, Method: Composition-based stats. Identities = 107/470 (23%), Positives = 179/470 (38%), Gaps = 72/470 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 N + + + Q ++ + V +++ G Sbjct 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD--------MVGVAQTGSGKT 145 Query 267 VKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + FL + P L++ P+RELA+Q +Y +L+ I Sbjct 146 LSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVA---AEYCRACRLKSTCIY 202 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG Q+ LE GV+I + TPGRL D + GK NL + +LVLDEAD +L G+ I Sbjct 203 GGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQI 262 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHH 443 ++ +QI Q ++ SAT +V++L+E + +++ E S + Sbjct 263 RKIVDQI------RPDRQTLMWSATWPK-EVRQLAEDFLKDYIHINIGALELSANHNILQ 315 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 +V + + K K + I Sbjct 316 IVDVCH-------------------------------------DVEKDEKLIRLMEEIMS 338 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 K ++ I+F TK CD L + + G + + +HGD+ ER L FK Sbjct 339 EKENKTIVFVETKRRCDELTRKMRRDG---------WPAMGIHGDKSQQERDWVLNEFKH 389 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G LI TDVA+RG+D+ V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449 Query 624 EKVWYHVCSSRGKGCYN-----TRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 K + S + +L ED G + + + + Sbjct 450 IKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSA 499 Score = 88.3 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (44%), Gaps = 4/94 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P Sbjct 93 VLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA 152 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 I + Q ++G I + + Sbjct 153 IVHI----NHQPFLERGDGPICLVLAPTRELAQQ 182 >sp|Q9Z6C9|CSHA_LIMRT ATP-dependent RNA helicase CshA OS=Limosilactobacillus reuteri OX=1598 GN=cshA PE=3 SV=1 Length=497 Score = 319 bits (818), Expect = 1e-99, Method: Composition-based stats. Identities = 106/421 (25%), Positives = 177/421 (42%), Gaps = 70/421 (17%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 LGL+ + +K A ++ + G + +A G K+ Sbjct 6 LGLSDSLLKAIKRSGYEEATPIQEQTIPMVLE----------GKDVIGQAQTG-TGKTAA 54 Query 272 SGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 G + +A+I+ P+RELA QT + + K + +R ++ GG R Sbjct 55 FGLPIIENVDTENPNIQAIIISPTRELAIQTQEELYRLGK---DKHVRVQVVYGGADIRR 111 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 Q+ L+ I+VGTPGRL D ++ + L ++ LVLDEAD +L+ G+ + I + + Sbjct 112 QIKSLKQHPQILVGTPGRLRDHINRHTVKLDHIKTLVLDEADEMLNMGFLEDIESIIKET 171 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P Q ++ SAT+ ++K++ + M P V +K ++ D V V Sbjct 172 PD------DRQTLLFSATMPP-EIKRIGVQFMSDPETVRIKAKELTTDLVDQYYVR---- 220 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 A K + R I D I+ Sbjct 221 ------------------------------------ARDYEKFDIMTRLIDVQDPDLTIV 244 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F RTK D L + I +G ++ +HGD +R + + +FK ++ L+ Sbjct 245 FGRTKRRVDELSKGLIARG---------YNAAGIHGDLTQDKRSKIMWKFKNNELDILVA 295 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 TDVAARG+DI GV +V N +P + +YVHRIGR GRA G++++ V + + + Sbjct 296 TDVAARGLDISGVTHVYNYDIPSDPDSYVHRIGRTGRAGHHGVSLTFVTPNEMDYLHEIE 355 Query 632 S 632 Sbjct 356 K 356 Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats. Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 14/143 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+G+ + +A++ + T IQ ++IP++L G DV+ A+TG+GKT AF +P+I+ Sbjct 3 FSELGLSDSLLKAIKRSGYEEATPIQEQTIPMVLEGKDVIGQAQTGTGKTAAFGLPIIEN 62 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 V + Q S + + + R + G Sbjct 63 VDTENPNIQ---------AIIISPTRELAIQTQEELYRLGKDKH-----VRVQVVYGGAD 108 Query 124 ATKGLMKGKHYYEVSCHDQGLCR 146 + + K + ++ G R Sbjct 109 IRRQIKSLKQHPQILVGTPGRLR 131 >sp|P17844|DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens OX=9606 GN=DDX5 PE=1 SV=1 Length=614 Score = 323 bits (827), Expect = 1e-99, Method: Composition-based stats. Identities = 107/470 (23%), Positives = 179/470 (38%), Gaps = 72/470 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 N + + + Q ++ + V +++ G Sbjct 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD--------MVGVAQTGSGKT 145 Query 267 VKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + FL + P L++ P+RELA+Q +Y +L+ I Sbjct 146 LSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVA---AEYCRACRLKSTCIY 202 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG Q+ LE GV+I + TPGRL D + GK NL + +LVLDEAD +L G+ I Sbjct 203 GGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQI 262 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHH 443 ++ +QI Q ++ SAT +V++L+E + +++ E S + Sbjct 263 RKIVDQI------RPDRQTLMWSATWPK-EVRQLAEDFLKDYIHINIGALELSANHNILQ 315 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 +V + + K K + I Sbjct 316 IVDVCH-------------------------------------DVEKDEKLIRLMEEIMS 338 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 K ++ I+F TK CD L + + G + + +HGD+ ER L FK Sbjct 339 EKENKTIVFVETKRRCDELTRKMRRDG---------WPAMGIHGDKSQQERDWVLNEFKH 389 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G LI TDVA+RG+D+ V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449 Query 624 EKVWYHVCSSRGKGCYN-----TRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 K + S + +L ED G + + + + Sbjct 450 IKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSA 499 Score = 88.3 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (44%), Gaps = 4/94 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P Sbjct 93 VLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA 152 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 I + Q ++G I + + Sbjct 153 IVHI----NHQPFLERGDGPICLVLAPTRELAQQ 182 >sp|A2QI25|DED1_ASPNC ATP-dependent RNA helicase ded1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=ded1 PE=3 SV=1 Length=678 Score = 325 bits (832), Expect = 1e-99, Method: Composition-based stats. Identities = 100/388 (26%), Positives = 159/388 (41%), Gaps = 54/388 (14%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 F LS+A + Q + P +LI+ P+REL Q + ++F Sbjct 242 LFPILSQAYQNGPSAAPAQAGGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFA--- 298 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 +R ++ GG QL +E G D++V TPGRL DL+ G+++L +++L+LDEAD Sbjct 299 YRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEAD 358 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 +L G+ I R+ + Q ++ SAT D++ L+ + ++ + Sbjct 359 RMLDMGFEPQIRRIVEG--EDMPHVNDRQTLMFSATFP-RDIQMLARDFLKDYVFLSVGR 415 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 S + + V V R + D +H + Sbjct 416 VGSTSENITQKVEYVEDHDKR--------SVLLDILHTHGTSGL---------------- 451 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +IF TK D+L + + Q +F +HGDR E Sbjct 452 ---------------TLIFVETKRMADSLSDFLLNQ---------RFPATAIHGDRTQRE 487 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R++ LE F+ G L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA G Sbjct 488 RERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTG 547 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNT 641 +A + V + + Sbjct 548 IATAFFNRGNRGVVRDLIDLLKEAHQEV 575 Score = 99.4 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + + + ++ + PT +Q SIP+++ G D++ A+TGSGKTG F P+ Sbjct 186 VNAFTNPPLDDHLIENIKLAHYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPI 245 Query 61 IQIVYETLKDQQEGKKGKT----------TIKTGASVLNKWQMNPYDRGSAFAIGS 106 + Y+ + G + + +D FA S Sbjct 246 LSQAYQNGPSAAPAQAGGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 301 >sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rrp3 PE=3 SV=1 Length=465 Score = 318 bits (815), Expect = 1e-99, Method: Composition-based stats. Identities = 104/503 (21%), Positives = 183/503 (36%), Gaps = 86/503 (17%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K+ K+LG+ ++ +N +++ + + L++ G Sbjct 45 AKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLAL--------EGRDVIGLAETGSGK 96 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + P L++ P+RELA Q + I +R +I+G Sbjct 97 TAAFAL---PMLQALMEAPQTLFGLVLAPTRELAYQISQAFETLGSTIG---VRCAVIVG 150 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ Q L I+V TPGRL D + +T +L +++L +DEAD LL + + + Sbjct 151 GMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESL 210 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 +++ +P + + SAT+ S V+ L + P V + + T+ Sbjct 211 DKIIRILP------RTRHTYLFSATM-STKVESLQRASLSNPVRVSVSSKYQTVSTLQSS 263 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K K Y V + E Sbjct 264 YICIPHKH----------------------------------------KNLYLVYLLNEF 283 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 AIIF T + + G F + LHG R L +F+ Sbjct 284 AGQSAIIFTTTVHETQRVAFMLRALG---------FGAIPLHGQLSQSARLGALGKFRSR 334 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V V N LP + + Y+HR+GR RA + G+AIS V Sbjct 335 SRDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQYDV 394 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 +VW + + K ++++D ++ +++ + + F Sbjct 395 EVWLRIEHALSKKLPEYQVEKDEVMV---------------MSERVAEASRQATIEMKSF 439 Query 685 DGKVTYGQKRAAGGGSYKGHVDI 707 D K K+ G + +D Sbjct 440 DEKKGARGKKFGKGKRSRDDMDQ 462 Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G++ ++ +A E M + PT IQ+++IPL L G DV+ AETGSGKT AF++P++ Sbjct 46 KSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPML 105 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + E +T + + C Sbjct 106 QALME---------APQTLFGLVLAPTRELAYQISQAFETLGSTIGVRCA 146 >sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP2 PE=3 SV=1 Length=540 Score = 320 bits (821), Expect = 1e-99, Method: Composition-based stats. Identities = 101/422 (24%), Positives = 170/422 (40%), Gaps = 66/422 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 I ++ ++ VA+++ G + + Sbjct 121 IMSEIRRMGFTAPSSIQCQAWPMALS--------GRDLVAIAETGSGKTISFCLPAMVHI 172 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P LI+ P+RELA Q +F + + ++R I GG Q+ Sbjct 173 NAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQ---SSRIRNTAIYGGAPKGPQIRD 229 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L+ GV+I V TPGRL D++ TGK NL +V +LV+DEAD +L G+ I ++ +QI Sbjct 230 LQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQI---- 285 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 Q ++ SAT +V++L+ +H V++ D Sbjct 286 --RPDRQTLLFSATWPK-EVQRLAMDFLHDFIQVNIGSLDLT------------------ 324 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 A N + + K+L + + + +IF T Sbjct 325 ---------------ANHNVAQHVEVCTDFDKRSKLLSHLEKI----SQENGKVLIFVAT 365 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K D+L ++ G + + +HGD++ ER L FK G ++ TDVA Sbjct 366 KRVADDLTKFLRMDG---------WPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVA 416 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 +RG+D+ + YVIN P+ ++Y+HRIGR GRA R G + + + K + Sbjct 417 SRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILR 476 Query 636 KG 637 + Sbjct 477 ES 478 Score = 103 bits (256), Expect = 9e-22, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G I + M + P+ IQ ++ P+ L G D++ AETGSGKT +F +P Sbjct 109 ITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPA 168 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + Q G I + + + + F S Sbjct 169 MVHI----NAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSS 210 >sp|P0CQ77|DBP2_CRYNB ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP2 PE=3 SV=1 Length=540 Score = 320 bits (821), Expect = 1e-99, Method: Composition-based stats. Identities = 101/422 (24%), Positives = 170/422 (40%), Gaps = 66/422 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 I ++ ++ VA+++ G + + Sbjct 121 IMSEIRRMGFTAPSSIQCQAWPMALS--------GRDLVAIAETGSGKTISFCLPAMVHI 172 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P LI+ P+RELA Q +F + + ++R I GG Q+ Sbjct 173 NAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQ---SSRIRNTAIYGGAPKGPQIRD 229 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L+ GV+I V TPGRL D++ TGK NL +V +LV+DEAD +L G+ I ++ +QI Sbjct 230 LQRGVEICVATPGRLIDMLETGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQI---- 285 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 Q ++ SAT +V++L+ +H V++ D Sbjct 286 --RPDRQTLLFSATWPK-EVQRLAMDFLHDFIQVNIGSLDLT------------------ 324 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 A N + + K+L + + + +IF T Sbjct 325 ---------------ANHNVAQHVEVCTDFDKRSKLLSHLEKI----SQENGKVLIFVAT 365 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 K D+L ++ G + + +HGD++ ER L FK G ++ TDVA Sbjct 366 KRVADDLTKFLRMDG---------WPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVA 416 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 +RG+D+ + YVIN P+ ++Y+HRIGR GRA R G + + + K + Sbjct 417 SRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILR 476 Query 636 KG 637 + Sbjct 477 ES 478 Score = 103 bits (256), Expect = 9e-22, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G I + M + P+ IQ ++ P+ L G D++ AETGSGKT +F +P Sbjct 109 ITTFEEAGFPDYIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPA 168 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + Q G I + + + + F S Sbjct 169 MVHI----NAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQSS 210 >sp|Q5R4I9|DDX5_PONAB Probable ATP-dependent RNA helicase DDX5 OS=Pongo abelii OX=9601 GN=DDX5 PE=2 SV=1 Length=614 Score = 323 bits (827), Expect = 1e-99, Method: Composition-based stats. Identities = 107/470 (23%), Positives = 179/470 (38%), Gaps = 72/470 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 N + + + Q ++ + V +++ G Sbjct 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD--------MVGVAQTGSGKT 145 Query 267 VKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + FL + P L++ P+RELA+Q +Y +L+ I Sbjct 146 LSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVA---AEYCRACRLKSTCIY 202 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG Q+ LE GV+I + TPGRL D + GK NL + +LVLDEAD +L G+ I Sbjct 203 GGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQI 262 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHH 443 ++ +QI Q ++ SAT +V++L+E + +++ E S + Sbjct 263 RKIVDQI------RPDRQTLMWSATWPK-EVRQLAEDFLKDYIHINIGALELSANHNILQ 315 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 +V + + K K + I Sbjct 316 IVDVCH-------------------------------------DVEKDEKLIRLMEEIMS 338 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 K ++ I+F TK CD L + + G + + +HGD+ ER L FK Sbjct 339 EKENKTIVFVETKRRCDELTRKMRRDG---------WPAMGIHGDKSQQERDWVLNEFKH 389 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G LI TDVA+RG+D+ V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449 Query 624 EKVWYHVCSSRGKGCYN-----TRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 K + S + +L ED G + + + + Sbjct 450 IKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSA 499 Score = 88.3 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (44%), Gaps = 4/94 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P Sbjct 93 VLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA 152 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 I + Q ++G I + + Sbjct 153 IVHI----NHQPFLERGDGPICLVLAPTRELAQQ 182 >sp|A1CXK7|DED1_NEOFI ATP-dependent RNA helicase ded1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=ded1 PE=3 SV=1 Length=676 Score = 325 bits (832), Expect = 1e-99, Method: Composition-based stats. Identities = 110/434 (25%), Positives = 169/434 (39%), Gaps = 81/434 (19%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 NG+DL + LFP A P V Sbjct 226 NGRDLMACAQTGSGKTGGFLFP-----------------------ILSQAFQTGPSA--V 260 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 +Q SG Q + P +LI+ P+REL Q + ++F +R ++ GG Sbjct 261 PAQASG--QFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFA---YRSWVRPCVVYGGA 315 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 QL +E G D++V TPGRL DL+ G+++L +++LVLDEAD +L G+ I R+ Sbjct 316 DIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLVLDEADRMLDMGFEPQIRRI 375 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + Q ++ SAT D++ L+ + ++ + S + + V Sbjct 376 VEG--EDMPNVNERQTLMFSATFP-RDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEY 432 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V R + D +H + Sbjct 433 VEDHDKR--------SVLLDILHTHGTSGL------------------------------ 454 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +IF TK D L + + Q +F +HGDR ER++ LE F+ G Sbjct 455 -TLIFVETKRMADALSDFLLNQ---------RFPATAIHGDRTQRERERALEMFRSGRCP 504 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA G+A + V Sbjct 505 ILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVV 564 Query 628 YHVCSSRGKGCYNT 641 + + Sbjct 565 RELIDLLKEAHQEV 578 Score = 96.4 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 25/116 (22%), Positives = 48/116 (41%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + + ++ + PT +Q SIP+++ G D++ A+TGSGKTG F P+ Sbjct 189 VNAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPI 248 Query 61 IQIVYETLKDQQEG----------KKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++T ++ + + +D FA S Sbjct 249 LSQAFQTGPSAVPAQASGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 304 >sp|P96614|CSHA_BACSU DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus subtilis (strain 168) OX=224308 GN=cshA PE=1 SV=2 Length=494 Score = 319 bits (817), Expect = 1e-99, Method: Composition-based stats. Identities = 106/467 (23%), Positives = 198/467 (42%), Gaps = 75/467 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 + +D L+ ++ + A ++ + ++ + ++ G Sbjct 2 TITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKD--------VIGQAQTGTGK 53 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 G V + +A+++ P+RELA Q + + + + + + L I G Sbjct 54 TAAF---GIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQ---DKRAKVLPIYG 107 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G Q+ L+ +I+VGTPGRL D ++ + L+ V +V+DEAD +L+ G+ D I Sbjct 108 GQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIE 167 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + +P Q ++ SAT+ + +K+++E+ M P V +K ++ + Sbjct 168 SILSNVP------SEHQTLLFSATMPAP-IKRIAERFMTEPEHVKVKAKEMTVSNIQQFY 220 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + V + K + R + Sbjct 221 LEVQERK----------------------------------------KFDTLTRLLDIQS 240 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + AI+F RTK D L + +G ++ +HGD +R L +FK+G Sbjct 241 PELAIVFGRTKRRVDELAEALNLRG---------YAAEGIHGDLTQAKRMVALRKFKEGA 291 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+A++ + ++ Sbjct 292 IEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKS 351 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 + + + + R+KE + Q+ E L TIS+ Sbjct 352 MLRAIEQTTKRKM--DRMKEPTLDEALEGQQQVT---VERLRTTISE 393 Score = 101 bits (251), Expect = 4e-21, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 41/70 (59%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ +A+ M + T IQA++IPL L DV+ A+TG+GKT AF IP+++ Sbjct 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63 Query 63 IVYETLKDQQ 72 + + Q Sbjct 64 KINPESPNIQ 73 >sp|Q4WP13|DED1_ASPFU ATP-dependent RNA helicase ded1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=ded1 PE=3 SV=1 Length=674 Score = 324 bits (831), Expect = 1e-99, Method: Composition-based stats. Identities = 101/388 (26%), Positives = 159/388 (41%), Gaps = 54/388 (14%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 F LS+A + Q + P +LI+ P+REL Q + ++F Sbjct 243 LFPILSQAFQTGPSPVPAQASGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFA--- 299 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 +R ++ GG QL +E G D++V TPGRL DL+ G+++L +++LVLDEAD Sbjct 300 YRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLVLDEAD 359 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 +L G+ I R+ + + Q ++ SAT D++ L+ + ++ + Sbjct 360 RMLDMGFEPQIRRIVEG--EDMPNVNERQTLMFSATFP-RDIQMLARDFLKDYVFLSVGR 416 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 S + + V V R + D +H + Sbjct 417 VGSTSENITQKVEYVEDHDKR--------SVLLDILHTHGTSGL---------------- 452 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +IF TK D L + + Q +F +HGDR E Sbjct 453 ---------------TLIFVETKRMADALSDFLLNQ---------RFPATAIHGDRTQRE 488 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R++ LE F+ G L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA G Sbjct 489 RERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTG 548 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNT 641 +A + V + + Sbjct 549 IATAFFNRSNRGVVRELIDLLKEAHQEV 576 Score = 97.1 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 25/116 (22%), Positives = 48/116 (41%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + + ++ + PT +Q SIP+++ G D++ A+TGSGKTG F P+ Sbjct 187 VNAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPI 246 Query 61 IQIVYETLKDQQEG----------KKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++T ++ + + +D FA S Sbjct 247 LSQAFQTGPSPVPAQASGQFGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 302 >sp|Q9C8J1|RH34_ARATH DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana OX=3702 GN=RH34 PE=2 SV=2 Length=392 Score = 315 bits (807), Expect = 1e-99, Method: Composition-based stats. Identities = 110/437 (25%), Positives = 182/437 (42%), Gaps = 66/437 (15%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 L FE +K F + + L+ +++G ++ + V + K D Sbjct 8 ENLVFETTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQ 67 Query 270 QHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 +G + + L++ PSRELA QT I+ + + ++ Sbjct 68 SGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTN---IQAHAC 124 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 IGG + + + LE GV V GTPGR+ D++ G L V+ LVLDE+D +LS+G D Sbjct 125 IGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQ 184 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 I ++ +P +QV + SATL ++ +++EK M P + +K ++ + + Sbjct 185 IYDVYRALPH------DIQVCLISATLP-QEILEMTEKFMTDPVRILVKPDELTLEGIKQ 237 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V V+ + K + Sbjct 238 YYVDVDKEE---------------------------------------WKFDTLCDLYGR 258 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 ++QAIIFC T+ D L + + F +HGD++ ER + +F+ Sbjct 259 LTINQAIIFCNTRQKVDWLTEKM---------RSSNFIVSSMHGDKRQKERDDIMNQFRS 309 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 R LI +DV ARGID+ V +VIN +P+ + Y+HRIGR GR R G+AI+ V + Sbjct 310 FKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSD 369 Query 624 EKVWYHVCSSRGKGCYN 640 K + G Sbjct 370 MKDLKDIERHYGTKIRE 386 Score = 91.0 bits (224), Expect = 3e-18, Method: Composition-based stats. Identities = 32/141 (23%), Positives = 58/141 (41%), Gaps = 2/141 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +MG+ ++ + V + + P++IQ ++ IL G DV+ A++G+GKT +I V Sbjct 21 IKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISV 80 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 QIV + + Q + + + + A A G K Sbjct 81 CQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHAC-IGGKSIGEDIKKLER 139 Query 121 GCRATKGLMKGKHYYEVSCHD 141 G A G G+ Y + Sbjct 140 GVHAVSG-TPGRVYDMIKRGS 159 >sp|A1D405|RRP3_NEOFI ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rrp3 PE=3 SV=1 Length=472 Score = 318 bits (814), Expect = 1e-99, Method: Composition-based stats. Identities = 111/503 (22%), Positives = 184/503 (37%), Gaps = 87/503 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ KDLG+ ++ + ++ + + L++ G Sbjct 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLAL--------QGRDLIGLAETGSGKT 103 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P + LI+ P+RELA Q + + I+ +R +I+GG Sbjct 104 AAFALPI---LQALMEKPQSFFGLILAPTRELAFQISKSFESLGSTIN---VRCAVIVGG 157 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L I+V TPGRL D + +T +L +++LV+DEAD LL + ++ Sbjct 158 MDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLD 217 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHV 444 ++ +P + + + SAT+ S V+ L + P V + T+ Sbjct 218 KILKVLP------RERRTFLFSATM-SSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQS 270 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K K Y V + E Sbjct 271 YLFLPHKH----------------------------------------KDIYLVYLLNEF 290 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 AIIF RT + + G F + LHG R L +F+ Sbjct 291 VGQSAIIFTRTVHETQRISFLLRSLG---------FGAIPLHGQLSQSARLGALGKFRSR 341 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V V+N LP + + YVHR+GR RA + G+AIS V Sbjct 342 SRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDV 401 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 ++W + + GK L++D L + + + V + F Sbjct 402 EIWLRIEGALGKKLKEYELEKDEVMV---------------LAERVGEAQRQAIVEMKNF 446 Query 685 DGKVTYGQKRAAGGGSYKGHVDI 707 D K K+ G + +D Sbjct 447 DEKRGTKAKKFGKGKRSRDEMDQ 469 Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G++ ++ +A E M + PT IQAESIPL L G D++ AETGSGKT AF++P++ Sbjct 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + E K ++ + + + + C Sbjct 112 QALME---------KPQSFFGLILAPTRELAFQISKSFESLGSTINVRCA 152 >sp|A1CH78|DED1_ASPCL ATP-dependent RNA helicase ded1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=ded1 PE=3 SV=1 Length=681 Score = 324 bits (831), Expect = 1e-99, Method: Composition-based stats. Identities = 112/434 (26%), Positives = 171/434 (39%), Gaps = 81/434 (19%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 NG+DL + LFP A K P V Sbjct 225 NGRDLMACAQTGSGKTGGFLFP-----------------------ILSQAFQKGPSA--V 259 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 +Q SG Q++ + P +LI+ P+REL Q + ++F +R ++ GG Sbjct 260 PAQASG--QMSYGRQRKAYPTSLILAPTRELVSQIFDEARKFA---YRSWVRPCVVYGGA 314 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 QL +E G D++V TPGRL DL+ G+++L + +LVLDEAD +L G+ I R+ Sbjct 315 DIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNINYLVLDEADRMLDMGFEPQIRRI 374 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + Q ++ SAT D++ L+ + ++ + S + + V Sbjct 375 VEG--EDMPSVNERQTLMFSATFP-RDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEY 431 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V E + K + D +H + Sbjct 432 V--------EDVDKRSVLLDILHTHGTSGL------------------------------ 453 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +IF TK D L + I Q +F +HGDR ER++ LE F+ Sbjct 454 -TLIFVETKRMADALSDFLINQ---------RFPATAIHGDRTQRERERALEMFRSARCP 503 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+DI V +VIN LP + +YVHRIGR GRA G+A + V Sbjct 504 ILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVV 563 Query 628 YHVCSSRGKGCYNT 641 + + Sbjct 564 RELIDLLKEAHQEV 577 Score = 95.6 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 24/116 (21%), Positives = 47/116 (41%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + + ++ + PT +Q SIP+++ G D++ A+TGSGKTG F P+ Sbjct 188 VNAFTNPPLDDHLISNIKLARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPI 247 Query 61 IQIVYETLKDQQEG----------KKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++ ++ + + +D FA S Sbjct 248 LSQAFQKGPSAVPAQASGQMSYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 303 >sp|Q9CWX9|DDX47_MOUSE Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus OX=10090 GN=Ddx47 PE=2 SV=2 Length=455 Score = 317 bits (813), Expect = 1e-99, Method: Composition-based stats. Identities = 105/500 (21%), Positives = 188/500 (38%), Gaps = 73/500 (15%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K KDLG+ + ++ + + L++ G Sbjct 23 TKTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLAL--------QGRDIIGLAETGSGK 74 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + P AL++ P+RELA Q + + ++ +I+G Sbjct 75 TGAFALPI---LNALLETPQRLFALVLTPTRELAFQISEQFEALG---SSIGVQCAVIVG 128 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ + Q L IV+ TPGRL D + +T NL +++LV+DEAD +L+ + + Sbjct 129 GIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 +++ IP + + + SAT+ V+KL + P + + + + Sbjct 189 DKILKVIP------RDRKTFLFSATMTK-KVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K K Y V + E Sbjct 242 YLFIPSK----------------------------------------FKDTYLVYILNEL 261 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + +IFC T + G F+ + LHG +R +L +FK Sbjct 262 AGNSFMIFCSTCNNTQRTALLLRNLG---------FTAIPLHGQMSQSKRLGSLNKFKAK 312 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVA+RG+DI V V+N +P ++Y+HR+GR RA R G AI+ V Sbjct 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372 Query 625 KVWYHVCSSRGKGC--YNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 +++ + GK + T+ +E T NE Q + +E + + + + D Sbjct 373 ELFQRIEHLIGKKLPVFPTQDEEVMMLTERVNEAQRFARMELREHGEKKKRKREDAGDDD 432 Query 683 EFDGKVTYGQKRAAGGGSYK 702 + +G + K A G + Sbjct 433 DKEGAIGVRNKVAGGKMKKR 452 Score = 102 bits (255), Expect = 8e-22, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++GV + +A +++ W PT IQ E+IPL L G D++ AETGSGKTGAF++P++ Sbjct 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + ET + + + ++ A C Sbjct 84 NALLET---------PQRLFALVLTPTRELAFQISEQFEALGSSIGVQCA 124 >sp|Q6FP38|DBP1_CANGA ATP-dependent RNA helicase DBP1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP1 PE=3 SV=1 Length=604 Score = 322 bits (825), Expect = 2e-99, Method: Composition-based stats. Identities = 92/355 (26%), Positives = 147/355 (41%), Gaps = 55/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+RELA Q + K KY ++ ++ GG Q+ ++ G +++V T Sbjct 222 PSALVLAPTRELAIQIFDEAK---KYTYRSWVKPYVVYGGAPIGQQMRDMDRGCNLLVAT 278 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+DL+ GK++L V++LVLDEAD +L G+ I + Q ++ Sbjct 279 PGRLNDLLERGKISLVNVKYLVLDEADRMLDMGFEPQIRHIVEDCD--MPSVNDRQTLMF 336 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT +++ L+ + ++ + S + + V+ V Sbjct 337 SATFP-REIQHLARDFLKDYIFLSVGRVGSTSENIQQKVLFVE----------------- 378 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + + ++F TK D L + Sbjct 379 -----------------------DYDKNSALLDILINEIDGLTLVFVETKRMADQLTDFL 415 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q F +HGDR ER++ L F+ G L+ T VAARG+DI V Sbjct 416 IVQ---------NFKATAIHGDRTQAERERALHAFRNGIANILVATAVAARGLDIPNVTN 466 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VIN LP + +YVHRIGR GRA +G+A S + + + + Sbjct 467 VINYDLPTDIDDYVHRIGRTGRAGNVGVATSFFNSNSMNIAKELMDLLTEANQEV 521 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 23/112 (21%), Positives = 44/112 (39%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F + + + VE ++ PT +Q SIP++ D++ A+TGSGKTG F PV Sbjct 137 ITEFKSPPLDELLLENVELANFSKPTPVQKYSIPIVTKNRDLMACAQTGSGKTGGFLFPV 196 Query 61 IQIVYETLKDQQEGKKGKT------TIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++ + + + + +D + S Sbjct 197 LSELFLNGPAPLPEHTRHSYMRKCYPSALVLAPTRELAIQIFDEAKKYTYRS 248 >sp|P46942|DB10_NICSY ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris OX=4096 PE=2 SV=1 Length=607 Score = 322 bits (825), Expect = 2e-99, Method: Composition-based stats. Identities = 108/408 (26%), Positives = 171/408 (42%), Gaps = 66/408 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNN 305 VA++K G + + Q + P P L++ P+RELA Q Sbjct 177 PIALQGRDIVAIAKTGSGKTLGYLMPAFIHLQQRRKNPQLGPTILVLSPTRELATQIQAE 236 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 +F K + ++ + GG QL L GVDIVV TPGRL+D++ +++L QV Sbjct 237 AVKFGK---SSRISCTCLYGGAPKGPQLRELSRGVDIVVATPGRLNDILEMRRVSLGQVS 293 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 +LVLDEAD +L G+ I ++ ++P + Q ++ +AT V+K++ ++ Sbjct 294 YLVLDEADRMLDMGFEPQIRKIVKEVPV------QRQTLMYTATWPKG-VRKIAADLLVN 346 Query 426 PTWVDLKGEDSV---PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 V++ D + H+ V + + R E++ +S Sbjct 347 SVQVNIGNVDELVANKSITQHIEVVLPMEKQRRVEQILRS-------------------- 386 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 + + IIFC TK CD L + + F Sbjct 387 --------------------KEPGSKIIIFCSTKKMCDQLSRNLTR----------NFGA 416 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 +HGD+ ER L +F+ G L+ TDVAARG+DI + VIN P ++YVHR Sbjct 417 AAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTGIEDYVHR 476 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSR--GKGCYNTRLKEDGG 648 IGR GRA GLA + + + K + C T L++ Sbjct 477 IGRTGRAGASGLAYTFFSDQDSKHALDLVKVLEGANQCVPTELRDMAS 524 Score = 105 bits (261), Expect = 4e-22, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 5/106 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F G EI + + + + PT IQA+S P+ L G D++ A+TGSGKT + +P Sbjct 144 LTSFEATGFPSEIVREMHQAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLMPA 203 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + K+ Q G S + F S Sbjct 204 FIHLQQRRKNPQLG-----PTILVLSPTRELATQIQAEAVKFGKSS 244 >sp|A5DQS0|DED1_PICGU ATP-dependent RNA helicase DED1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DED1 PE=3 SV=3 Length=637 Score = 323 bits (827), Expect = 2e-99, Method: Composition-based stats. Identities = 96/355 (27%), Positives = 150/355 (42%), Gaps = 55/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q K+F +R ++ GG Q+ L+ G D++V T Sbjct 253 PTALVMAPTRELVSQIFEEAKKFS---YRSWVRPCVVYGGADIGTQIRNLDRGCDLLVAT 309 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++LS +++LVLDEAD +L G+ I + + + Q ++ Sbjct 310 PGRLKDLLERGRVSLSNIKYLVLDEADRMLDMGFEPQIRHIVQECD--MPGVESRQTLMF 367 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L+ + ++ + S + + V+ V Sbjct 368 SATFP-RDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDDE-------------- 412 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + + + IIF TK DNL + Sbjct 413 --------------------------KKSVLLDLLSANDNGLTIIFTETKRMADNLADFL 446 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 QG F +HGDR +ER++ L FK G L+ T VAARG+DI V + Sbjct 447 YDQG---------FPATAIHGDRSQYEREKALAAFKSGTAPILVATAVAARGLDIPNVSH 497 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 V+N LP + +YVHRIGR GRA +G+A + V + + Sbjct 498 VVNYDLPGDIDDYVHRIGRTGRAGNVGIATAFFNRNNRNVVKGMIELLSEANQEV 552 Score = 95.2 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 34/148 (23%), Positives = 59/148 (40%), Gaps = 17/148 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++AF+ + P I + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 168 ISAFTAPPLDPLIVENIKLSRFTKPTPVQKYSVPIVASGRDLMACAQTGSGKTGGFLFPV 227 Query 61 IQIVYETLKDQQEGKKGK------TTIKTGASVLNKWQMNPYDRGSAFAIGS-------- 106 + Y D +G + + ++ F+ S Sbjct 228 LSESYMNGPDAVPESQGAFSSHKVHPTALVMAPTRELVSQIFEEAKKFSYRSWVRPCVVY 287 Query 107 DGLCCQSREVKEWHGC---RATKGLMKG 131 G ++ GC AT G +K Sbjct 288 GGADIGTQIRNLDRGCDLLVATPGRLKD 315 >sp|Q0CLJ6|DED1_ASPTN ATP-dependent RNA helicase ded1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=ded1 PE=3 SV=1 Length=674 Score = 324 bits (829), Expect = 3e-99, Method: Composition-based stats. Identities = 99/388 (26%), Positives = 159/388 (41%), Gaps = 54/388 (14%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 F LS+A + Q+ + P +LI+ P+REL Q + ++F Sbjct 241 LFPILSQAFQNGPSPTPAPAGGQLGYGRQRKAYPTSLILAPTRELVSQIFDEARKFA--- 297 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 +R ++ GG QL +E G D++V TPGRL DL+ G+++L +++L+LDEAD Sbjct 298 YRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEAD 357 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 +L G+ I R+ + Q ++ SAT D++ L+ + ++ + Sbjct 358 RMLDMGFEPQIRRIVEG--EDMPHVNDRQTLMFSATFP-RDIQMLARDFLKDYVFLSVGR 414 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 S + + V V R + D +H + Sbjct 415 VGSTSENITQKVEYVEDHDKR--------SVLLDILHTHGTSGL---------------- 450 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +IF TK D+L + + Q +F +HGDR E Sbjct 451 ---------------TLIFVETKRMADSLSDFLLNQ---------RFPATAIHGDRTQRE 486 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R++ LE F+ G L+ T VAA G+DI V +VIN LP + +YVHRIGR GRA G Sbjct 487 RERALEMFRSGRCPILVATAVAASGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTG 546 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNT 641 +A + V + + Sbjct 547 IATAFFNRGNRGVVRDLIDLLKEAHQEV 574 Score = 97.5 bits (241), Expect = 1e-19, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 46/116 (40%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + + + +L PT +Q SIP+++ G D++ A+TGSGKTG F P+ Sbjct 185 VNAFTNPPLDDHLISNIALARYLTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPI 244 Query 61 IQIVYETLKDQQEGKKGKT----------TIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++ G + + +D FA S Sbjct 245 LSQAFQNGPSPTPAPAGGQLGYGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 300 >sp|Q6CH58|RRP3_YARLI ATP-dependent rRNA helicase RRP3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=RRP3 PE=3 SV=1 Length=480 Score = 317 bits (813), Expect = 3e-99, Method: Composition-based stats. Identities = 110/494 (22%), Positives = 192/494 (39%), Gaps = 80/494 (16%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 +++D+ + +K KDLG+ I + ++ + + Sbjct 54 VEVDESEEQ-TKTFKDLGVIDSICETCEELKFTKPTPIQAQSIPYAL--------EGRDI 104 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 + L++ G + P +++ P+RELA Q + + Sbjct 105 IGLAQTGSGKTAAF---AIPVLQSLYENPQPLYCVVLAPTRELAYQISETFEALGSAMG- 160 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADG 374 LR +++GG+ Q L ++V TPGRL D + +T +L ++FLV+DEAD Sbjct 161 --LRTAVVVGGMNMMTQAVALSKKPHVIVATPGRLVDHLENTKGFSLRTLKFLVMDEADR 218 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 LL + ++++ IP ++ + SAT+ S V+KL + P V + + Sbjct 219 LLDMEFGPSLDKILKVIP------RQRNTYLFSATMTS-KVEKLQRASLVDPVRVAVSTK 271 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 D + +V K K Sbjct 272 YQTADNLLQYMVFCPFKH----------------------------------------KD 291 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + V + E+ + IIF RTK D + G + + LHGD R Sbjct 292 THLVYLVSENAGNSMIIFARTKSDTQRISLLLRNLG---------YGAIPLHGDLSQTAR 342 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 L +FK G LI TDVA+RG+DI V VIN +P + ++Y+HR+GR RA R G Sbjct 343 LGALNKFKSGSRNILIATDVASRGLDIPAVDLVINYDIPSDSKSYIHRVGRTARAGRAGK 402 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 +++LV+ +++ + + GK + L+ + M + E I +++ Sbjct 403 SVALVSQYDLELYLRIEGALGKKLDSYPLESEAV-------MLFSERVAEASRAAIQEMK 455 Query 675 -PDIKVPVDEFDGK 687 D +FD K Sbjct 456 GEDGTKKRSKFDKK 469 Score = 104 bits (259), Expect = 3e-22, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 9/106 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++GV+ I + EE+ + PT IQA+SIP L G D++ A+TGSGKT AF+IPV+ Sbjct 64 KTFKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVL 123 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 Q +YE + + + + A Sbjct 124 QSLYEN---------PQPLYCVVLAPTRELAYQISETFEALGSAMG 160 >sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=rrp3 PE=3 SV=1 Length=472 Score = 317 bits (812), Expect = 3e-99, Method: Composition-based stats. Identities = 111/503 (22%), Positives = 185/503 (37%), Gaps = 87/503 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ KDLG+ ++ + ++ + + L++ G Sbjct 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLAL--------QGRDLIGLAETGSGKT 103 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P + LI+ P+RELA Q + + I+ +R +I+GG Sbjct 104 AAFALPI---LQALMENPQSFFGLILAPTRELAFQISKSFESLGSTIN---VRCAVIVGG 157 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L I+V TPGRL D + +T +L +++LV+DEAD LL + ++ Sbjct 158 MDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLD 217 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHV 444 ++ +P + + + SAT+ S V+ L + P V + T+ Sbjct 218 KILKVLP------RERRTFLFSATM-SSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQS 270 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K K Y V + E Sbjct 271 YLFLPHKH----------------------------------------KDIYLVYLLNEF 290 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 IIF RT + + G F + LHG R L +F+ Sbjct 291 VGQSTIIFTRTVHETQRISFLLRSLG---------FGAIPLHGQLSQSARLGALGKFRSR 341 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V V+N LP + + YVHR+GR RA + G+AIS V Sbjct 342 SRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDV 401 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 ++W + + GK L++D + + E + Q ++K F Sbjct 402 EIWLRIEGALGKKLKEYELEKD-----------EVMVLAERVGEAQRQAIMEMKN----F 446 Query 685 DGKVTYGQKRAAGGGSYKGHVDI 707 D K K+ G + +D Sbjct 447 DEKRGTKAKKFGKGKRSRDEMDQ 469 Score = 107 bits (266), Expect = 3e-23, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G++ ++ +A E M + PT IQAESIPL L G D++ AETGSGKT AF++P++ Sbjct 52 KSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 111 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + E ++ + + + + C Sbjct 112 QALMEN---------PQSFFGLILAPTRELAFQISKSFESLGSTINVRCA 152 >sp|A7TKR8|DED1_VANPO ATP-dependent RNA helicase DED1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DED1 PE=3 SV=1 Length=650 Score = 322 bits (826), Expect = 3e-99, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 156/370 (42%), Gaps = 63/370 (17%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+RELA Q + K K+ +R ++ GG Q+ L G D++V T Sbjct 244 PTALVLAPTRELATQIYDEAK---KFTYRSWVRPTVVYGGSDIGSQIRDLSRGCDLLVAT 300 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++L+ V++LVLDEAD +L G+ I ++ + Q ++ Sbjct 301 PGRLSDLLERGRVSLANVKYLVLDEADRMLDMGFEPQIRQIVDGCD--MPPVGERQTLMF 358 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L+ + ++ + S + + ++ V Sbjct 359 SATFPD-DIQHLARDFLSDYIFLSVGKVGSTSENITQRILYVE----------------- 400 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + K + + +IF TK D L + Sbjct 401 -----------------------DMDKKSTLLDLLSASNDGLTLIFVETKRMADELTDFL 437 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q F +HGDR ER++ L FK G+ L+ T VAARG+DI V + Sbjct 438 IMQ---------DFRATAIHGDRTQSERERALAAFKNGNANLLVATAVAARGLDIPNVTH 488 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 V+N LP + +YVHRIGR GRA G+A + + KG Y + + Sbjct 489 VVNYDLPSDIDDYVHRIGRTGRAGNTGVATAFFNRGNRNIV--------KGMYELLAEAN 540 Query 647 GGCTIWYNEM 656 + N++ Sbjct 541 QEIPPFLNDV 550 Score = 95.6 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + + + + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 159 ITEFTSPPLDALLLENIILARFTKPTPVQKYSVPIVSRGRDLMACAQTGSGKTGGFLFPV 218 Query 61 IQIVYETLKDQQEGKKGKT------TIKTGASVLNKWQMNPYDRGSAFAIGS 106 + ++ K+ + + YD F S Sbjct 219 LSESFKNGPSPMPESARKSFVKKAYPTALVLAPTRELATQIYDEAKKFTYRS 270 >sp|A3LQ01|DED1_PICST ATP-dependent RNA helicase DED1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DED1 PE=3 SV=3 Length=647 Score = 322 bits (826), Expect = 4e-99, Method: Composition-based stats. Identities = 94/355 (26%), Positives = 153/355 (43%), Gaps = 55/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+REL Q + K+F ++ ++ GG Q+ L+ G D++V T Sbjct 252 PTILVMAPTRELVSQIYDEAKKFA---YRSWVKPAVVYGGADIGQQIRNLDKGCDLLVAT 308 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++L+ +++LVLDEAD +L G+ I + + D + Q ++ Sbjct 309 PGRLKDLLERGRVSLANIKYLVLDEADRMLDMGFEPQIRHIVQECD--MPDVQDRQTLMF 366 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT + D++ L+ + ++ + S + + ++ V + Sbjct 367 SATFPT-DIQMLARDFLKDYIFLSVGRVGSTSENITQKILYVEDEE-------------- 411 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + + IIF TK DNL + Sbjct 412 --------------------------KKSVLLDLLSAGDAGLTIIFTETKRMADNLADFL 445 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 QG F +HGDR +ER++ L FK G L+ T VAARG+DI V + Sbjct 446 YDQG---------FPATAIHGDRSQYEREKALAAFKSGAAPILVATAVAARGLDIPNVAH 496 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VIN LP + +YVHRIGR GRA +G+A + + V + + Sbjct 497 VINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGLIDLLSEANQEV 551 Score = 92.9 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F+ + + + + + PT +Q S+P++ GG D++ A+TGSGKTG F PV Sbjct 167 ITSFTAPPLDELLVENITMSRFTKPTPVQKYSVPIVAGGRDLMACAQTGSGKTGGFLFPV 226 Query 61 IQIVYETLKDQQEGKKGKTTIKTGAS------VLNKWQMNPYDRGSAFAIGS 106 + Y G + + YD FA S Sbjct 227 LSESYINGPAPIAESTGAFSSHKVHPTILVMAPTRELVSQIYDEAKKFAYRS 278 >sp|Q4R6M5|DDX5_MACFA Probable ATP-dependent RNA helicase DDX5 OS=Macaca fascicularis OX=9541 GN=DDX5 PE=2 SV=1 Length=614 Score = 321 bits (823), Expect = 4e-99, Method: Composition-based stats. Identities = 107/470 (23%), Positives = 179/470 (38%), Gaps = 72/470 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 N + + + Q ++ + V +++ G Sbjct 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD--------MVGVAQTGSGKT 145 Query 267 VKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + FL + P L++ P+RELA+Q +Y +L+ I Sbjct 146 LSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVA---AEYCRACRLKSTCIY 202 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG Q+ LE GV+I + TPGRL D + GK NL + +LVLDEAD +L G+ I Sbjct 203 GGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQI 262 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHH 443 ++ +QI Q ++ SAT +V++L+E + +++ E S + Sbjct 263 RKIVDQI------RPDRQTLMWSATWPK-EVRQLAEDFLKDYIHINIGALELSANHNILQ 315 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 +V + + K K + I Sbjct 316 IVDVCH-------------------------------------DVEKDEKLIRLMEEIMS 338 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 K ++ I+F TK CD L + + G + + +HGD+ ER L FK Sbjct 339 EKENKTIVFVETKRRCDELTRKMRRDG---------WPAMGIHGDKSQQERGWVLNEFKH 389 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G LI TDVA+RG+D+ V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449 Query 624 EKVWYHVCSSRGKGCYN-----TRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 K + S + +L ED G + + + + Sbjct 450 IKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSA 499 Score = 88.3 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (44%), Gaps = 4/94 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P Sbjct 93 VLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA 152 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 I + Q ++G I + + Sbjct 153 IVHI----NHQPFLERGDGPICLVLAPTRELAQQ 182 >sp|A5DZE6|DED1_LODEL ATP-dependent RNA helicase DED1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DED1 PE=3 SV=1 Length=664 Score = 323 bits (827), Expect = 4e-99, Method: Composition-based stats. Identities = 94/355 (26%), Positives = 154/355 (43%), Gaps = 55/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+REL Q + K+F +R ++ GG +Q+ L+ G D++V T Sbjct 259 PTILVMAPTRELVSQIYDESKKFA---YRSWVRPCVVYGGADIGNQIRQLDRGCDLLVAT 315 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++L+ +++LVLDEAD +L G+ I + + D + Q ++ Sbjct 316 PGRLKDLLERGRVSLANIKYLVLDEADRMLDMGFEPQIRHIVQECD--MPDVQDRQTLMF 373 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L+ + ++ + S + + V+ V + Sbjct 374 SATFP-RDIQMLARDFLKDYIFLSVGRVGSTSENITQKVLYVEDEE-------------- 418 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + + + I+F TK DNL + Sbjct 419 --------------------------KKSVILDLLNANSEGLTIVFTETKRMADNLADFL 452 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 QG F +HGDR +ER++ L FK G L+ T VAARG+DI V + Sbjct 453 YDQG---------FPATAIHGDRSQYEREKALAAFKSGQAPILVATAVAARGLDIPNVSH 503 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VIN LP + +YVHRIGR GRA +G+A + + + + + Sbjct 504 VINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNIVKGMLDLLTEANQEV 558 Score = 94.4 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 56/148 (38%), Gaps = 17/148 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F+ + + + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 174 INSFTAPPLDELLVENIKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 233 Query 61 IQIVYETLKDQQEGKKGK------TTIKTGASVLNKWQMNPYDRGSAFAIGS-------- 106 + Y G + + YD FA S Sbjct 234 LSESYMNGPAPIPESTGAFSSHKVYPTILVMAPTRELVSQIYDESKKFAYRSWVRPCVVY 293 Query 107 DGLCCQSREVKEWHGC---RATKGLMKG 131 G ++ + GC AT G +K Sbjct 294 GGADIGNQIRQLDRGCDLLVATPGRLKD 321 >sp|Q5A9Z6|FAL1_CANAL ATP-dependent RNA helicase FAL1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=FAL1 PE=3 SV=1 Length=399 Score = 314 bits (805), Expect = 4e-99, Method: Composition-based stats. Identities = 114/445 (26%), Positives = 178/445 (40%), Gaps = 73/445 (16%) Query 211 DLGLAF--EIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYI 266 D L F + +K F + LK LK + +G E + + D Sbjct 9 DNELEFSHKSTKGIKVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIA 68 Query 267 VKSQHSGNA------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 +G + +ALI+ P+RELA Q N +K Y++ + Sbjct 69 QAQSGTGKTATFSIGMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMN---IHT 125 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 IGG + + L+ G IV GTPGR+ D++ L ++ L+LDEAD L ++G+ Sbjct 126 HACIGGKNVGEDVKKLQQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTKGF 185 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 + I ++ +P SATL +V +++ K P + +K ++ Sbjct 186 KEQIYEIYKHLPPSVQVVVV------SATLP-REVLEMTSKFTTDPVKILVKRDEISLSG 238 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + V + K + Sbjct 239 IKQYYVQCERED---------------------------------------WKFDTLCDL 259 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + QA+IFC TK+ + L +Q F+ V +HGD K ER + Sbjct 260 YDNLTITQAVIFCNTKLKVNWLADQMKKQ---------NFTVVAMHGDMKQDERDSIMND 310 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F++G+ R LI TDV ARGID+ V VIN LP +K+NY+HRIGR GR R G AI+L+ Sbjct 311 FRRGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLIT 370 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKE 645 + Y+T++KE Sbjct 371 KDDVVTLKEFEK-----YYSTKIKE 390 Score = 98.3 bits (243), Expect = 1e-20, Method: Composition-based stats. Identities = 21/102 (21%), Positives = 44/102 (43%), Gaps = 9/102 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F M + P++ + + + P+ IQ+ +I I+ G D + A++G+GKT FSI ++ Sbjct 26 RTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGML 85 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +++ K+ Q S + + + Sbjct 86 EVIDTKSKECQ---------ALILSPTRELAIQIQNVVKHLG 118 >sp|P0A4D8|CSHA_STRR6 DEAD-box ATP-dependent RNA helicase CshA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=cshA PE=3 SV=1 Length=524 Score = 318 bits (816), Expect = 4e-99, Method: Composition-based stats. Identities = 112/480 (23%), Positives = 205/480 (43%), Gaps = 74/480 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +L L+ ++ ++ A ++ + G + +A G K Sbjct 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALE----------GKDVIGQAQTG-TGK 51 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + G + + + +AL++ P+RELA Q+ + +F + + ++ + GG + Sbjct 52 TAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRFGR---SKGVKVRSVYGGSS 108 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L++G IVVGTPGRL DL+ L L + L+LDEAD +L+ G+ + I + Sbjct 109 IEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAII 168 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +++P + Q ++ SAT+ +K++ + M P V + ++ + V + V Sbjct 169 SRVP------ENRQTLLFSATMPDA-IKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRV 221 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + R + + + Sbjct 222 KEQE----------------------------------------KFDTMTRLMDVAQPEL 241 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AI+F RTK D L + +G F +HGD ++R + L FK G++ Sbjct 242 AIVFGRTKRRVDELTRGLKIRG---------FRAEGIHGDLDQNKRLRVLRDFKNGNLDV 292 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE---K 625 L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G +I+ VA + + Sbjct 293 LVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQ 352 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE-IEEHLNCTISQVEPDIKVPVDEF 684 + ++ R KG ++E ++ + +E + + D + EF Sbjct 353 IIENLTKKRMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEKFGKDARKLAAEF 412 Score = 95.6 bits (236), Expect = 3e-19, Method: Composition-based stats. Identities = 23/102 (23%), Positives = 46/102 (45%), Gaps = 9/102 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + ++ +E+ ++ + IQ ++IPL L G DV+ A+TG+GKT AF +P ++ Sbjct 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + Q + + + + F Sbjct 63 IRTEEATIQ---------ALVIAPTRELAVQSQEELFRFGRS 95 >sp|P0A4D7|CSHA_STRPN DEAD-box ATP-dependent RNA helicase CshA OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=cshA PE=3 SV=1 Length=524 Score = 318 bits (816), Expect = 4e-99, Method: Composition-based stats. Identities = 112/480 (23%), Positives = 205/480 (43%), Gaps = 74/480 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +L L+ ++ ++ A ++ + G + +A G K Sbjct 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALE----------GKDVIGQAQTG-TGK 51 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + G + + + +AL++ P+RELA Q+ + +F + + ++ + GG + Sbjct 52 TAAFGLPTLEKIRTEEATIQALVIAPTRELAVQSQEELFRFGR---SKGVKVRSVYGGSS 108 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L++G IVVGTPGRL DL+ L L + L+LDEAD +L+ G+ + I + Sbjct 109 IEKQIKALKSGAHIVVGTPGRLLDLIKRKALKLQDIETLILDEADEMLNMGFLEDIEAII 168 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +++P + Q ++ SAT+ +K++ + M P V + ++ + V + V Sbjct 169 SRVP------ENRQTLLFSATMPDA-IKRIGVQFMKAPEHVKIAAKELTTELVDQYYIRV 221 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + R + + + Sbjct 222 KEQE----------------------------------------KFDTMTRLMDVAQPEL 241 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AI+F RTK D L + +G F +HGD ++R + L FK G++ Sbjct 242 AIVFGRTKRRVDELTRGLKIRG---------FRAEGIHGDLDQNKRLRVLRDFKNGNLDV 292 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE---K 625 L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G +I+ VA + + Sbjct 293 LVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQ 352 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE-IEEHLNCTISQVEPDIKVPVDEF 684 + ++ R KG ++E ++ + +E + + D + EF Sbjct 353 IIENLTKKRMKGLKPASVEESFQSKKQVALKKIERDFADETIRANFEKFGKDARKLAAEF 412 Score = 95.6 bits (236), Expect = 3e-19, Method: Composition-based stats. Identities = 23/102 (23%), Positives = 46/102 (45%), Gaps = 9/102 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + ++ +E+ ++ + IQ ++IPL L G DV+ A+TG+GKT AF +P ++ Sbjct 3 FNELNLSADLLAEIEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEK 62 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + Q + + + + F Sbjct 63 IRTEEATIQ---------ALVIAPTRELAVQSQEELFRFGRS 95 >sp|A1CR32|RRP3_ASPCL ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=rrp3 PE=3 SV=1 Length=473 Score = 317 bits (811), Expect = 4e-99, Method: Composition-based stats. Identities = 111/503 (22%), Positives = 184/503 (37%), Gaps = 87/503 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ KDLG+ ++ ++ + + L++ G Sbjct 53 KSFKDLGIIDQLCEACATMGYKAPTPIQAESIPLAL--------QDRDLIGLAETGSGKT 104 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P + L++ P+RELA Q + + I+ +R +I+GG Sbjct 105 AAFALPI---LQALMDKPQSFFGLVLAPTRELAFQISQSFEALGSTIN---VRCAVIVGG 158 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L I+V TPGRL D + +T +L +++LV+DEAD LL + ++ Sbjct 159 MDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGPLLD 218 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHV 444 ++ +P + + + SAT+ S V+ L + P V + T+ Sbjct 219 KILKILP------RERRTFLFSATM-SSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQS 271 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + K K Y V + E Sbjct 272 YRFIPHKH----------------------------------------KDIYLVYLLNEF 291 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 AIIF RT + + G F + LHG R L +F+ Sbjct 292 VGQSAIIFTRTVHETQRISFLLRALG---------FGAIPLHGQLSQSSRLGALGKFRSR 342 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V V+N LP + + YVHR+GR RA + G+AIS V Sbjct 343 SRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDV 402 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 ++W + + GK L++D + + E + Q ++K F Sbjct 403 EIWLRIEGALGKKLDEYDLEKD-----------EVMVLAERVGEAQRQAIMEMKN----F 447 Query 685 DGKVTYGQKRAAGGGSYKGHVDI 707 D K K+ G + +D Sbjct 448 DEKKGTRAKKFGKGKRSRDEMDQ 470 Score = 102 bits (255), Expect = 8e-22, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G++ ++ +A M + PT IQAESIPL L D++ AETGSGKT AF++P++ Sbjct 53 KSFKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQDRDLIGLAETGSGKTAAFALPIL 112 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + + K ++ + + A + C Sbjct 113 QALMD---------KPQSFFGLVLAPTRELAFQISQSFEALGSTINVRCA 153 >sp|Q0UAT0|FAL1_PHANO ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=FAL1 PE=3 SV=3 Length=374 Score = 313 bits (802), Expect = 5e-99, Method: Composition-based stats. Identities = 108/437 (25%), Positives = 173/437 (40%), Gaps = 84/437 (19%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D + F + F A LK L+ + +G E V + K D Sbjct 10 DEKMEFSTSKEVTVAPTFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQA 69 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 +G L + I Y++ ++ IGG Sbjct 70 QSGTGKTATFSISIL-------------------QSVIMGLGDYMN---VQCHACIGGTN 107 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 + + L+ G +V GTPGR+ D++ L ++ LVLDEAD LL++G+ + I ++ Sbjct 108 VGEDIRKLDYGQHVVSGTPGRVADMIRRRNLRTRNIKMLVLDEADELLNRGFREQIYDVY 167 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P T QV+V SATL +DV +++ K M P + +K ++ + + + + Sbjct 168 RYLPPAT------QVVVVSATLP-YDVLEMTTKFMTDPVRILVKRDELTLEGLKQYFIAI 220 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + + L Y I Q Sbjct 221 EKEEWKF----------------------------------DTLCDLYDTLTIT-----Q 241 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 A+IFC T+ D L + F+ +HGD ER ++ F++ + R Sbjct 242 AVIFCNTRRKVDWLTDKMREA---------NFTVSSMHGDMPQRERDSIMQDFRQANSRV 292 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 LI TDV ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E ++ Sbjct 293 LISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTQEDVRILR 352 Query 629 HVCSSRGKGCYNTRLKE 645 + Y+T++ E Sbjct 353 DIEL-----YYSTQIDE 364 Score = 82.5 bits (202), Expect = 2e-15, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + + + + + P+ +Q+ +I + G D + A++G+GKT FSI ++Q Sbjct 26 TFEAMHLKENLLRGIYAYGYESPSAVQSRAIVQVCKGRDTIAQAQSGTGKTATFSISILQ 85 Query 63 IV 64 V Sbjct 86 SV 87 >sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis (strain RS) OX=246410 GN=RRP3 PE=3 SV=1 Length=474 Score = 316 bits (810), Expect = 6e-99, Method: Composition-based stats. Identities = 105/504 (21%), Positives = 184/504 (37%), Gaps = 83/504 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K+ KDLG+ + + ++ + + L++ G Sbjct 47 TKSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLAL--------QGRDLIGLAETGSGK 98 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + P + L++ P+RELA Q + I +R +I+G Sbjct 99 TAAFALPI---LQALMDKPQSMFGLVLAPTRELAYQISQQFEALGSLIS---VRCAVIVG 152 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ Q L I+V TPGRL D + +T +L +++LV+DEAD LL + + Sbjct 153 GMDMVSQAIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPIL 212 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHH 443 +++ +P K + + SAT+ S V+ L + P V + T+ Sbjct 213 DKILKVLP------KERRTYLFSATM-SSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQ 265 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + + K K Y + + E Sbjct 266 NCLIIPHKH----------------------------------------KDIYLIYLLNE 285 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 IIF RT + L G F + LHG R L +F+ Sbjct 286 FPGQSVIIFTRTVNETQRLAILLRALG---------FGAIPLHGQLSQSARLGALGKFRS 336 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 L+ TDVAARG+DI V V+N LP + + Y+HR+GR RA + G A SLV Sbjct 337 RSRNILVATDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSGRAFSLVTQYD 396 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 ++W + ++ GK +++++ + + E + H + ++ Sbjct 397 VEIWQRIEAALGKELDEYKVEKEEVMVL----SDRVGEAQRHAITEMKELH-----ENRG 447 Query 684 FDGKVTYGQKRAAGGGSYKGHVDI 707 G + R G G+ + ++ Sbjct 448 KKGATL--RNRRIGKGAKRSRDEM 469 Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G++ + +A + + + PT IQAESIPL L G D++ AETGSGKT AF++P++ Sbjct 48 KSFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 107 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + + K ++ + + + A Sbjct 108 QALMD---------KPQSMFGLVLAPTRELAYQISQQFEALGS 141 >sp|Q5JKF2|RH40_ORYSJ DEAD-box ATP-dependent RNA helicase 40 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0549400 PE=2 SV=2 Length=792 Score = 326 bits (835), Expect = 7e-99, Method: Composition-based stats. Identities = 109/423 (26%), Positives = 179/423 (42%), Gaps = 70/423 (17%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 G EI ++ ++ ++ VA++K G + Sbjct 156 GFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD--------VVAIAKTGSGKTLGYLLP 207 Query 273 GNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 G + + + P P L++ P+RELA Q L +F + + ++ + GG Sbjct 208 GFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGR---SSRISSTCLYGGAPKGP 264 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 QL L+ GVD+VV TPGRL+D++ +++L QV +LVLDEAD +L G+ I ++ +I Sbjct 265 QLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEI 324 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP--DTVHHVVVPVN 449 P R Q ++ +AT +V++++E ++ P V + D + + V + Sbjct 325 P------PRRQTLMYTATWPK-EVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELIT 377 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 P E +IL+ + + Sbjct 378 P-------------------------------SEKLRRLEQILRS--------QDSGSKV 398 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +IFC TK CD L + +Q F +HGD+ ER++ L F+ G L Sbjct 399 LIFCTTKRMCDQLARTLTRQ----------FGASAIHGDKSQSEREKVLSHFRSGRSPIL 448 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TDVAARG+DI + VIN P ++YVHRIGR GRA G+A + + K Sbjct 449 VATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAAD 508 Query 630 VCS 632 + Sbjct 509 LIK 511 Score = 98.7 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 26/106 (25%), Positives = 44/106 (42%), Gaps = 5/106 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F G PEI + ++ + PT IQA+S P+ L DV+ A+TGSGKT + +P Sbjct 149 ITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPG 208 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + + G + + + F S Sbjct 209 FMHIKRLQNNPRSG-----PTVLVLAPTRELATQILEEAVKFGRSS 249 >sp|A7TEF4|FAL1_VANPO ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=FAL1 PE=3 SV=1 Length=399 Score = 313 bits (803), Expect = 7e-99, Method: Composition-based stats. Identities = 116/442 (26%), Positives = 189/442 (43%), Gaps = 72/442 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + FS+ +D L F+ +K F + LK+ L+ +G F+ P A+++ Sbjct 1 MSFSRE-EDKKLKFKTSKKLKISPTFESMNLKDDLLRGIYGY-GFEAPSAIQSRAITQII 58 Query 263 DG-YIVKSQHSGNAQ--------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G ++ SG + + +AL++ P+RELA Q + Y+ Sbjct 59 SGTDVIAQAQSGTGKTATFTIGMLQAIDLKRKDLQALVLSPTRELASQINQVVSNLGDYM 118 Query 314 DNPKLRELLIIGGVAARDQLSVL-ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + ++ + GG +D L+ + +NG +V GTPGR+ D+ LN V+ L+LDEA Sbjct 119 N---VQSYAMTGGKTMKDDLNRMQKNGCQVVSGTPGRVLDMFKRHLLNTRNVQMLILDEA 175 Query 373 DGLL--SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 D LL S G+ I + ++P QV+V SAT+ S D+ ++++K M P + Sbjct 176 DELLGESLGFKQQIYDIFTKLPAA------CQVVVVSATM-SKDILEVTKKFMSDPVKIL 228 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 +K ++ + + V V + Sbjct 229 VKRDEISLEGIKQYYVNVEKED-------------------------------------- 250 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 K + + Q +IFC TK D L Q F+ V +HGD K Sbjct 251 -WKFDTLCDLYDSLTITQCVIFCNTKKKVDWLSAKLTQ---------SNFAVVSMHGDMK 300 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 +R + + F+ G R LI TDV ARGID+ V VIN +P+ +NY+HRIGR GR Sbjct 301 QEDRNKVMSDFRSGHSRVLISTDVWARGIDVQQVSLVINYDIPEIMENYIHRIGRSGRFG 360 Query 611 RMGLAISLVATEKEKVWYHVCS 632 R G+AI+ + + + Sbjct 361 RKGVAINFITSSDLSKMKEIEK 382 Score = 102 bits (255), Expect = 5e-22, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 55/138 (40%), Gaps = 1/138 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F M + ++ + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++Q Sbjct 24 TFESMNLKDDLLRGIYGYGFEAPSAIQSRAITQIISGTDVIAQAQSGTGKTATFTIGMLQ 83 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 + KD Q T + Y ++A+ + +GC Sbjct 84 AIDLKRKDLQALVLSPTRELASQINQVVSNLGDYMNVQSYAMTGGKTMKDDLNRMQKNGC 143 Query 123 RATKGLMKGKHYYEVSCH 140 + G G+ H Sbjct 144 QVVSG-TPGRVLDMFKRH 160 >sp|Q6FJG1|FAL1_CANGA ATP-dependent RNA helicase FAL1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=FAL1 PE=3 SV=1 Length=399 Score = 313 bits (803), Expect = 7e-99, Method: Composition-based stats. Identities = 107/419 (26%), Positives = 178/419 (42%), Gaps = 71/419 (17%) Query 226 ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY-IVKSQHSGNAQ-------- 276 A F + LK L+ + F+ P A+++ G ++ SG + Sbjct 23 ATFESMDLKEGLLRGIYSY-GFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGM 81 Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + + +AL++ P+RELA Q + Y++ ++ + GG +D L + Sbjct 82 LQAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMN---VKAYAMTGGKTMKDDLKKI 138 Query 337 EN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ--GYSDFINRMHNQIPQ 393 + G ++ GTPGR+ D++ + V+ LVLDEAD LLS G+ I + ++P+ Sbjct 139 QKHGCQVISGTPGRVLDMIKRRLIETRHVQILVLDEADELLSDTLGFKHQIYDIFTKLPR 198 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 + QV+V SAT+ S ++ ++++K M+ P + +K ++ + + V V + Sbjct 199 TS------QVVVVSATM-SPEILEITKKFMNDPVKILVKRDEITLEGIKQYYVNVEKEE- 250 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 K + + Q +IFC Sbjct 251 --------------------------------------WKFDTLCDIYDSLTITQCVIFC 272 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 +K D L K F+ + +HGD K ER + + F+ G R LI TD Sbjct 273 NSKKKVDWLAHKL---------KQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLISTD 323 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 V ARGID+ V VIN LP+ +NYVHRIGR GR R G+AI+ + + Sbjct 324 VWARGIDVQQVSLVINYDLPEITENYVHRIGRSGRFGRKGVAINFLTKIDASRMKEIEK 382 Score = 102 bits (255), Expect = 5e-22, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 0/126 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F M + + + + + P+ IQ+ +I I+ G DV+ A++G+GKT F+I ++ Sbjct 23 ATFESMDLKEGLLRGIYSYGFEAPSAIQSRAITQIISGKDVIAQAQSGTGKTATFTIGML 82 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 Q + D Q T + Y A+A+ + + HG Sbjct 83 QAIDLKKHDLQALVLSPTRELAAQIGKVVTNLGDYMNVKAYAMTGGKTMKDDLKKIQKHG 142 Query 122 CRATKG 127 C+ G Sbjct 143 CQVISG 148 >sp|Q2R1M8|RH52C_ORYSJ DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0599500 PE=3 SV=1 Length=623 Score = 321 bits (822), Expect = 8e-99, Method: Composition-based stats. Identities = 104/399 (26%), Positives = 164/399 (41%), Gaps = 57/399 (14%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN---------APKALIVEPSRELAEQT 302 +A ++ G + + + P ALI+ P+REL+ Q Sbjct 192 GRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQI 251 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS 362 ++F +R ++ GG QL LE GVDI+V TPGRL DL+ +++L Sbjct 252 HEEARKFS---YQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQ 308 Query 363 QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKI 422 +R+L LDEAD +L G+ + R+ Q+ Q ++ SAT ++++++ Sbjct 309 SIRYLALDEADRMLDMGFEPQVRRIVEQMDMPPPGA--RQTMLFSATFPK-EIQRMASDF 365 Query 423 MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 + ++ + S D + V V R SH+ +D+ PG Sbjct 366 LENYIFLAVGRVGSSTDLIVQRVEFVQEADKR-------SHLMDLLHAQRDSATPG---- 414 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 K ++F TK D+LE + G F Sbjct 415 ----------------------KPTLTLVFVETKRGADSLEHWLCMNG---------FPA 443 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 +HGDR ER+ L FK G L+ TDVAARG+DI V +V+N LP++ +YVHR Sbjct 444 TSIHGDRNQQEREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 503 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 IGR GRA + GLA + + + + Sbjct 504 IGRTGRAGKSGLATAFFNENNSSMARSLAELMQESNQEV 542 Score = 111 bits (278), Expect = 3e-24, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 3/106 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+E+ + + + ++ PT +Q +IP+ L G D++ A+TGSGKT AF P+ Sbjct 154 VGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPI 213 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLN---KWQMNPYDRGSAFA 103 I + Q+ + G T A +L+ + M ++ F+ Sbjct 214 ISGIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKFS 259 >sp|P0CR00|RRP3_CRYNJ ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=RRP3 PE=3 SV=1 Length=484 Score = 316 bits (810), Expect = 8e-99, Method: Composition-based stats. Identities = 103/447 (23%), Positives = 169/447 (38%), Gaps = 71/447 (16%) Query 202 HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA 261 +K DLG++ E+ + ++ + + L++ Sbjct 33 EASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHAL--------EGKDIIGLAQT 84 Query 262 PDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 G + P AL++ P+RELA Q + +R Sbjct 85 GSGKTAAFSLPI---LQTLWENPQPFFALVLAPTRELAYQISQQVTSLG---SGIGVRTA 138 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGY 380 +++GG+ Q L I+V TPGRL D + +T +L +++LV+DEAD LL + Sbjct 139 VLVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDF 198 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I+++ IP K + SAT+ + V KL ++ P V++ + S T Sbjct 199 GPIIDKILKVIP------KERNTYLFSATMTT-KVAKLQRASLNKPVRVEVSSKYSTVST 251 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + + + K K Y + Sbjct 252 LLQHYLLLPLKN----------------------------------------KDAYLLYL 271 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 E +IF RT D L + G F + LHG R +L + Sbjct 272 ANELSSSSMMIFTRTVADSQRLSIILRRLG---------FPAIPLHGQMTQSLRLASLNK 322 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 FK G L+ TDVA+RG+DI V VIN +P ++YVHR+GR RA R G +I+LV Sbjct 323 FKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVT 382 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDG 647 ++ + S GK + + ++ Sbjct 383 QYDVEILQRIESHIGKKMTSFDVDKEA 409 Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 54/106 (51%), Gaps = 9/106 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ PE+ +A M + P+DIQAE+IP L G D++ A+TGSGKT AFS+P++ Sbjct 38 KTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL 97 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 Q ++E + + + + ++ G Sbjct 98 QTLWEN---------PQPFFALVLAPTRELAYQISQQVTSLGSGIG 134 >sp|P0CR01|RRP3_CRYNB ATP-dependent rRNA helicase RRP3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=RRP3 PE=3 SV=1 Length=484 Score = 316 bits (810), Expect = 8e-99, Method: Composition-based stats. Identities = 103/447 (23%), Positives = 169/447 (38%), Gaps = 71/447 (16%) Query 202 HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA 261 +K DLG++ E+ + ++ + + L++ Sbjct 33 EASHNKTFADLGISPELCRACASMGFKKPSDIQAEAIPHAL--------EGKDIIGLAQT 84 Query 262 PDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 G + P AL++ P+RELA Q + +R Sbjct 85 GSGKTAAFSLPI---LQTLWENPQPFFALVLAPTRELAYQISQQVTSLG---SGIGVRTA 138 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGY 380 +++GG+ Q L I+V TPGRL D + +T +L +++LV+DEAD LL + Sbjct 139 VLVGGMDMMSQSIALSKRPHIIVATPGRLMDHLENTKGFSLKSLKYLVMDEADRLLDLDF 198 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I+++ IP K + SAT+ + V KL ++ P V++ + S T Sbjct 199 GPIIDKILKVIP------KERNTYLFSATMTT-KVAKLQRASLNKPVRVEVSSKYSTVST 251 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + + + K K Y + Sbjct 252 LLQHYLLLPLKN----------------------------------------KDAYLLYL 271 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 E +IF RT D L + G F + LHG R +L + Sbjct 272 ANELSSSSMMIFTRTVADSQRLSIILRRLG---------FPAIPLHGQMTQSLRLASLNK 322 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 FK G L+ TDVA+RG+DI V VIN +P ++YVHR+GR RA R G +I+LV Sbjct 323 FKSGGRSILVATDVASRGLDIPLVDLVINYDMPTNSKDYVHRVGRTARAGRSGKSITLVT 382 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDG 647 ++ + S GK + + ++ Sbjct 383 QYDVEILQRIESHIGKKMTSFDVDKEA 409 Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 54/106 (51%), Gaps = 9/106 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ PE+ +A M + P+DIQAE+IP L G D++ A+TGSGKT AFS+P++ Sbjct 38 KTFADLGISPELCRACASMGFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPIL 97 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 Q ++E + + + + ++ G Sbjct 98 QTLWEN---------PQPFFALVLAPTRELAYQISQQVTSLGSGIG 134 >sp|C8V8H4|DED1_EMENI ATP-dependent RNA helicase ded1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ded1 PE=3 SV=1 Length=668 Score = 322 bits (825), Expect = 9e-99, Method: Composition-based stats. Identities = 97/355 (27%), Positives = 152/355 (43%), Gaps = 54/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +LI+ P+REL Q + ++F +R ++ GG QL +E G D++V T Sbjct 272 PTSLILAPTRELVSQIFDEARKFA---YRSWVRPCVVYGGADIGSQLRQIERGCDLLVAT 328 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++L +++L+LDEAD +L G+ I R+ + + Q ++ Sbjct 329 PGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEG--EDMPNVNDRQTLMF 386 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L+ + ++ + S + + V V R + Sbjct 387 SATFP-RDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEYVEDHDKR--------SVLL 437 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D +H T +IF TK D L ++ Sbjct 438 DILHTHGTTGL-------------------------------TLIFVETKRMADALSEFL 466 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 I Q +F +HGDR ER++ LE F+ G L+ T VAARG+DI V + Sbjct 467 INQ---------RFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIPNVTH 517 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VIN LP + +YVHRIGR GRA G+A + V + + Sbjct 518 VINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEV 572 Score = 95.6 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 27/114 (24%), Positives = 48/114 (42%), Gaps = 8/114 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + + + PT +Q SIP+++ G D++ A+TGSGKTG F P+ Sbjct 185 VNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPI 244 Query 61 IQIVYETLKDQ-------QEGKKGKT-TIKTGASVLNKWQMNPYDRGSAFAIGS 106 + Y+ Q G++ K + + +D FA S Sbjct 245 LSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRS 298 >sp|Q2H1Q8|RRP3_CHAGB ATP-dependent rRNA helicase RRP3 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=RRP3 PE=3 SV=1 Length=493 Score = 317 bits (811), Expect = 9e-99, Method: Composition-based stats. Identities = 117/503 (23%), Positives = 182/503 (36%), Gaps = 79/503 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K +DLG+ + K ++ + + L++ G Sbjct 65 KTFQDLGIVDSLCDACKELGWKKPTPIQQESIPLAL--------QDRDIIGLAETGSGKT 116 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P AL++ P+RELA Q + + I LR LI+GG Sbjct 117 GAFALPI---LQALLDKPQPLFALVLAPTRELAAQIAQSFEALGSLIS---LRCALILGG 170 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L +VV TPGRL D + T +L +R+LV+DEAD LL + ++ Sbjct 171 LDMVQQAIALGKKPHVVVATPGRLLDHLEKTKGFSLRNLRYLVMDEADRLLDMDFGPILD 230 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHV 444 ++ +P + + + SAT+ S V+ L + P V + + T+ Sbjct 231 KILKFLP------RERRTFLFSATM-SSKVESLQRACLRDPLKVSISSSKYQTVSTLVQN 283 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + K Y + E Sbjct 284 YVFIPHTH----------------------------------------KDTYLIYLCNEF 303 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 IIF RT I+ + G G + LHG R L +F+ G Sbjct 304 AGQTIIIFTRTVIETQRIAILLRTLGMG---------AIPLHGGLSQSARLGALNKFRAG 354 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V V+N+ LP + + YVHR+GR RA R G AIS V Sbjct 355 SRDILVATDVAARGLDIPNVDCVLNLDLPGDSKTYVHRVGRTARAGRSGHAISFVTQYDL 414 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 ++W + ++ G L++D + E + I + D Sbjct 415 ELWLRIEAALGTKLTEYSLEKDDVMVFRP----RVEEAQRIAKTEIKALMDDRGKKGSVL 470 Query 685 DGKVTYGQKRAAGGGSYKGHVDI 707 G G+KR G S + H+D Sbjct 471 KGG--KGRKRGPPGSS-RDHMDA 490 Score = 101 bits (251), Expect = 3e-21, Method: Composition-based stats. Identities = 29/67 (43%), Positives = 44/67 (66%), Gaps = 0/67 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++G++ + A +E+ W PT IQ ESIPL L D++ AETGSGKTGAF++P++ Sbjct 65 KTFQDLGIVDSLCDACKELGWKKPTPIQQESIPLALQDRDIIGLAETGSGKTGAFALPIL 124 Query 62 QIVYETL 68 Q + + Sbjct 125 QALLDKP 131 >sp|Q814I2|DBPA_BACCR ATP-dependent RNA helicase DbpA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=dbpA PE=2 SV=1 Length=481 Score = 316 bits (809), Expect = 1e-98, Method: Composition-based stats. Identities = 114/470 (24%), Positives = 195/470 (41%), Gaps = 74/470 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ D L+ EI + ++ + K V S+ G Sbjct 4 KSFSDYKLSKEIVRALTGLGYDHPTEVQGEVIPVAL--------QKKDLVVKSQTGSGKT 55 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 G ++ N P+AL++ P+RELA Q +I ++ +++ + G Sbjct 56 ASF---GIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRF---KRIKAAAVYGK 109 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 Q L+ IVVGTPGR+ D + G L+L +++LV+DEAD +L+ G+ D + Sbjct 110 SPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLECLKYLVIDEADEMLNMGFIDQVEA 169 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + +++P + ++ SATL DV+KLS M+ PT +++K D + H Sbjct 170 IIDELPT------KRMTMLFSATLP-EDVEKLSRTYMNSPTHIEIKAAGITTDKIEHT-- 220 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 E I+ K Sbjct 221 --------------------------------------LFEVIEDEKLSLLKDVTTIENP 242 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 D IIFCRT+ + D++ + + + C +HG +R + ++ F+KG Sbjct 243 DSCIIFCRTQENVDHVYRQLKRA---------NYPCDKIHGGMVQEDRFEVMDDFRKGKF 293 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 R+L+ TDVAARGIDI + +VIN +P EK++YVHR GR GRA G AI+ + + + Sbjct 294 RYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYENRF 353 Query 627 WYHVCSSRG----KGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 + G K ++ + + ++ I++ N I++ Sbjct 354 LEEIEEYIGFEIPKAIGPSKEEVMKEKAAFEEKLHAKPIIKKDKNADINK 403 Score = 88.6 bits (218), Expect = 4e-17, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 59/129 (46%), Gaps = 2/129 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS+ + EI +A+ + + PT++Q E IP+ L D+++ ++TGSGKT +F IP+ Sbjct 4 KSFSDYKLSKEIVRALTGLGYDHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLC 63 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDG-LCCQSREVKEW- 119 ++V Q T + + + R A A+ Q E+K+ Sbjct 64 EMVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAVYGKSPFARQKLELKQKT 123 Query 120 HGCRATKGL 128 H T G Sbjct 124 HIVVGTPGR 132 >sp|Q81IT9|CSHA_BACCR DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=cshA PE=2 SV=2 Length=533 Score = 317 bits (812), Expect = 2e-98, Method: Composition-based stats. Identities = 105/463 (23%), Positives = 191/463 (41%), Gaps = 75/463 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++LGL+ + +++ A ++ + + ++ G Sbjct 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL--------QGKDIIGQAQTGTGKTAA 55 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 G + + + + +++ P+RELA Q + + K+ ++R L I GG Sbjct 56 F---GLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQD 109 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L+ I+VGTPGR+ D ++ L L V +VLDEAD +L+ G+ + I + Sbjct 110 INRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAIL 169 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P + Q ++ SAT+ +++++E+ M P + +K ++ + + V Sbjct 170 TDVP------ETHQTLLFSATMPDP-IRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV 222 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K K + R + + Sbjct 223 QEKK----------------------------------------KFDVLTRLLDIQSPEL 242 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AI+F RTK D L + +G ++ +HGD +R L +FK+G + Sbjct 243 AIVFGRTKRRVDELSEALNLRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+A+ V + Sbjct 294 LVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLK 353 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 ++ + + R+ + +L I E L TI Sbjct 354 NIERTTKRKM--DRMDAPTLDEALEGQQRL---IAEKLQSTIE 391 Score = 107 bits (266), Expect = 6e-23, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK-WQMNPYDRGSAFAI 104 + V +T K+ +G T + V + +++ + R I Sbjct 61 LDKV-DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPI 104 >sp|Q8H136|RH14_ARATH DEAD-box ATP-dependent RNA helicase 14 OS=Arabidopsis thaliana OX=3702 GN=RH14 PE=1 SV=2 Length=619 Score = 320 bits (819), Expect = 2e-98, Method: Composition-based stats. Identities = 104/424 (25%), Positives = 173/424 (41%), Gaps = 72/424 (17%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 G E+ + + ++ VA++K G + Sbjct 164 GFPPELLREVLSAGFSAPTPIQAQSWPIAM--------QGRDIVAIAKTGSGKTLGYLIP 215 Query 273 GNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 G + + + P L++ P+RELA Q +F + + ++ + GG Sbjct 216 GFLHLQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGR---SSRISCTCLYGGAPKGP 272 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 QL LE G DIVV TPGRL+D++ +++L Q+ +LVLDEAD +L G+ I ++ +I Sbjct 273 QLRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKEI 332 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV---PDTVHHVVVPV 448 P + Q ++ +AT V+K++ ++ P V++ D + H+ V Sbjct 333 PT------KRQTLMYTATWPKG-VRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVA 385 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + R E++ +S + + Sbjct 386 PMEKQRRLEQILRS----------------------------------------QEPGSK 405 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 IIFC TK CD L + +Q F +HGD+ ER L +F+ G Sbjct 406 VIIFCSTKRMCDQLTRNLTRQ----------FGAAAIHGDKSQPERDNVLNQFRSGRTPV 455 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+D+ + V+N P+ ++YVHRIGR GRA G A + + K Sbjct 456 LVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHAS 515 Query 629 HVCS 632 + Sbjct 516 DLIK 519 Score = 102 bits (253), Expect = 3e-21, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 44/106 (42%), Gaps = 5/106 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F G PE+ + V + PT IQA+S P+ + G D++ A+TGSGKT + IP Sbjct 157 LMSFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPG 216 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + D + G S + + F S Sbjct 217 FLHLQRIRNDSRMG-----PTILVLSPTRELATQIQEEAVKFGRSS 257 >sp|Q6HPE6|CSHA_BACHK DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) OX=281309 GN=cshA PE=3 SV=1 Length=528 Score = 317 bits (812), Expect = 2e-98, Method: Composition-based stats. Identities = 105/463 (23%), Positives = 191/463 (41%), Gaps = 75/463 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++LGL+ + +++ A ++ + + ++ G Sbjct 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL--------QGKDIIGQAQTGTGKTAA 55 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 G + + + + +++ P+RELA Q + + K+ ++R L I GG Sbjct 56 F---GLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQD 109 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L+ I+VGTPGR+ D ++ L L V +VLDEAD +L+ G+ + I + Sbjct 110 INRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAIL 169 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P + Q ++ SAT+ +++++E+ M P + +K ++ + + V Sbjct 170 TDVP------ETHQTLLFSATMPDP-IRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV 222 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K K + R + + Sbjct 223 QEKK----------------------------------------KFDVLTRLLDIQSPEL 242 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AI+F RTK D L + +G ++ +HGD +R L +FK+G + Sbjct 243 AIVFGRTKRRVDELSEALNLRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+A+ V + Sbjct 294 LVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLK 353 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 ++ + + R+ + +L I E L TI Sbjct 354 NIERTTKRKM--DRMDAPTLDEALEGQQRL---IAEKLQSTIE 391 Score = 107 bits (266), Expect = 6e-23, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK-WQMNPYDRGSAFAI 104 + V +T K+ +G T + V + +++ + R I Sbjct 61 LDKV-DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPI 104 >sp|Q81VG0|CSHA_BACAN DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus anthracis OX=1392 GN=cshA PE=3 SV=1 Length=528 Score = 317 bits (812), Expect = 2e-98, Method: Composition-based stats. Identities = 105/463 (23%), Positives = 191/463 (41%), Gaps = 75/463 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++LGL+ + +++ A ++ + + ++ G Sbjct 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL--------QGKDIIGQAQTGTGKTAA 55 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 G + + + + +++ P+RELA Q + + K+ ++R L I GG Sbjct 56 F---GLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQD 109 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L+ I+VGTPGR+ D ++ L L V +VLDEAD +L+ G+ + I + Sbjct 110 INRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAIL 169 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P + Q ++ SAT+ +++++E+ M P + +K ++ + + V Sbjct 170 TDVP------ETHQTLLFSATMPDP-IRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV 222 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K K + R + + Sbjct 223 QEKK----------------------------------------KFDVLTRLLDIQSPEL 242 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AI+F RTK D L + +G ++ +HGD +R L +FK+G + Sbjct 243 AIVFGRTKRRVDELSEALNLRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+A+ V + Sbjct 294 LVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLK 353 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 ++ + + R+ + +L I E L TI Sbjct 354 NIERTTKRKM--DRMDAPTLDEALEGQQRL---IAEKLQSTIE 391 Score = 107 bits (266), Expect = 6e-23, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK-WQMNPYDRGSAFAI 104 + V +T K+ +G T + V + +++ + R I Sbjct 61 LDKV-DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPI 104 >sp|A0R8U6|CSHA_BACAH DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus thuringiensis (strain Al Hakam) OX=412694 GN=cshA PE=3 SV=1 Length=528 Score = 317 bits (812), Expect = 2e-98, Method: Composition-based stats. Identities = 105/463 (23%), Positives = 191/463 (41%), Gaps = 75/463 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++LGL+ + +++ A ++ + + ++ G Sbjct 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL--------QGKDIIGQAQTGTGKTAA 55 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 G + + + + +++ P+RELA Q + + K+ ++R L I GG Sbjct 56 F---GLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQD 109 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L+ I+VGTPGR+ D ++ L L V +VLDEAD +L+ G+ + I + Sbjct 110 INRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAIL 169 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P + Q ++ SAT+ +++++E+ M P + +K ++ + + V Sbjct 170 TDVP------ETHQTLLFSATMPDP-IRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV 222 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K K + R + + Sbjct 223 QEKK----------------------------------------KFDVLTRLLDIQSPEL 242 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AI+F RTK D L + +G ++ +HGD +R L +FK+G + Sbjct 243 AIVFGRTKRRVDELSEALNLRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+A+ V + Sbjct 294 LVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLK 353 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 ++ + + R+ + +L I E L TI Sbjct 354 NIERTTKRKM--DRMDAPTLDEALEGQQRL---IAEKLQSTIE 391 Score = 107 bits (266), Expect = 6e-23, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK-WQMNPYDRGSAFAI 104 + V +T K+ +G T + V + +++ + R I Sbjct 61 LDKV-DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPI 104 >sp|Q73EU1|CSHA_BACC1 DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ATCC 10987 / NRS 248) OX=222523 GN=cshA PE=3 SV=1 Length=525 Score = 317 bits (811), Expect = 2e-98, Method: Composition-based stats. Identities = 101/453 (22%), Positives = 189/453 (42%), Gaps = 72/453 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++LGL+ + +++ A ++ + + ++ G Sbjct 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL--------QGKDIIGQAQTGTGKTAA 55 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 G + + + + +++ P+RELA Q + + K+ ++R L I GG Sbjct 56 F---GLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQD 109 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L+ I+VGTPGR+ D ++ L L V +VLDEAD +L+ G+ + I + Sbjct 110 INRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAIL 169 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P + Q ++ SAT+ +++++E+ M P + +K ++ + + V Sbjct 170 TDVP------ETHQTLLFSATMPDP-IRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV 222 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K K + R + + Sbjct 223 QEKK----------------------------------------KFDVLTRLLDIQSPEL 242 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AI+F RTK D L + +G ++ +HGD +R L +FK+G + Sbjct 243 AIVFGRTKRRVDELSEALNLRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+A+ V + Sbjct 294 LVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLK 353 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 ++ + + R+ + +L++E Sbjct 354 NIERTTKRKM--DRMDAPTLDEALEGQQRLIAE 384 Score = 106 bits (265), Expect = 6e-23, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK-WQMNPYDRGSAFAI 104 + V +T K+ +G T + V + +++ + R I Sbjct 61 LDKV-DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPI 104 >sp|Q9VHP0|DDX3_DROME ATP-dependent RNA helicase bel OS=Drosophila melanogaster OX=7227 GN=bel PE=1 SV=1 Length=798 Score = 324 bits (831), Expect = 2e-98, Method: Composition-based stats. Identities = 102/406 (25%), Positives = 168/406 (41%), Gaps = 60/406 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP------------NAPKALIVEP 294 +A ++ G Q+ + +P P L++ P Sbjct 327 PIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAP 386 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV 354 +RELA Q K+F ++R ++ GG +Q+ L+ G ++V TPGRL+D++ Sbjct 387 TRELATQIFEEAKKFA---YRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMI 443 Query 355 STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD 414 + GK+ L +RFLVLDEAD +L G+ I R+ Q+ + Q ++ SAT Sbjct 444 TRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLN--MPPTGQRQTLMFSATFPKQ- 500 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 +++L+ + ++ + S + + ++ V R + S IR + KD+ Sbjct 501 IQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDS 560 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 +IF TK D+LE++ Q Sbjct 561 L---------------------------------TLIFVETKKGADSLEEFLYQ------ 581 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 +HGDR ER++ L F+ GD L+ T VAARG+DI V +VIN LP Sbjct 582 ---CNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPS 638 Query 595 EKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 + + YVHRIGR GR +G+A S + + + + Sbjct 639 DVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQE 684 Score = 107 bits (268), Expect = 9e-23, Method: Composition-based stats. Identities = 34/148 (23%), Positives = 65/148 (44%), Gaps = 17/148 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++ + I V + PT +Q +IP+I+ G D++ A+TGSGKT AF +P+ Sbjct 294 ITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPI 353 Query 61 IQIVYET------LKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS-------- 106 + +YE +Q ++ + + + + ++ FA S Sbjct 354 LNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLY 413 Query 107 --DGLCCQSREV-KEWHGCRATKGLMKG 131 + Q RE+ + H AT G ++ Sbjct 414 GGNNTSEQMRELDRGCHLIVATPGRLED 441 >sp|Q63GX5|CSHA_BACCZ DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ZK / E33L) OX=288681 GN=cshA PE=3 SV=1 Length=528 Score = 317 bits (811), Expect = 2e-98, Method: Composition-based stats. Identities = 101/457 (22%), Positives = 190/457 (42%), Gaps = 72/457 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++LGL+ + +++ A ++ + + ++ G Sbjct 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHAL--------QGKDIIGQAQTGTGKTAA 55 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 G + + + + +++ P+RELA Q + + K+ ++R L I GG Sbjct 56 F---GLPLLDKVDTHKESVQGIVIAPTRELAIQVGEELYKIGKH---KRVRILPIYGGQD 109 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L+ I+VGTPGR+ D ++ L L V +VLDEAD +L+ G+ + I + Sbjct 110 INRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAIL 169 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P + Q ++ SAT+ +++++E+ M P + +K ++ + + V Sbjct 170 TDVP------ETHQTLLFSATMPDP-IRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEV 222 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K K + R + + Sbjct 223 QEKK----------------------------------------KFDVLTRLLDIQSPEL 242 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AI+F RTK D L + +G ++ +HGD +R L +FK+G + Sbjct 243 AIVFGRTKRRVDELSEALNLRG---------YAAEGIHGDLTQAKRMSVLRKFKEGSIEV 293 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+A+ V + Sbjct 294 LVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLK 353 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 ++ + + R+ + +L++E + Sbjct 354 NIERTTKRKM--DRMDAPTLDEALEGQQRLIAEKLQS 388 Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats. Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 2/105 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q+VE M + T IQAE+IP L G D++ A+TG+GKT AF +P+ Sbjct 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK-WQMNPYDRGSAFAI 104 + V +T K+ +G T + V + +++ + R I Sbjct 61 LDKV-DTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPI 104 >sp|Q65N62|CSHA_BACLD DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=cshA PE=3 SV=1 Length=487 Score = 315 bits (807), Expect = 3e-98, Method: Composition-based stats. Identities = 99/433 (23%), Positives = 185/433 (43%), Gaps = 70/433 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 + +D L+ ++ +K A ++ + ++ + ++ G Sbjct 2 TITFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKD--------VIGQAQTGTGK 53 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 G V + +A+++ P+RELA Q + + + + + R L I G Sbjct 54 TAAF---GIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQ---DKRARVLPIYG 107 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G Q+ L+ I+VGTPGRL D ++ + L V +VLDEAD +L+ G+ + I Sbjct 108 GQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIE 167 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + +P Q ++ SAT+ + +K+++E+ M P V +K ++ + Sbjct 168 SILSNVPA------EHQTLLFSATMPAP-IKRIAERFMTNPEHVKVKAKEMTVSNIQQFY 220 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + V+ + K + R + Sbjct 221 LEVHERK----------------------------------------KFDTLTRLLDIQS 240 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + AI+F RTK D L + +G ++ +HGD +R L +FK+G Sbjct 241 PELAIVFGRTKRRVDELTEALNLRG---------YTAEGIHGDLTQAKRMVALRKFKQGA 291 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+DI GV +V N +P + ++YVHRIGR GRA + G+A++ + ++ Sbjct 292 IEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKD 351 Query 626 VWYHVCSSRGKGC 638 + + + + Sbjct 352 MLRAIEQTTKRKM 364 Score = 98.3 bits (243), Expect = 3e-20, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + ++ +A++ M + T IQA++IPL L DV+ A+TG+GKT AF IP+++ Sbjct 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63 Query 63 IVYETLKDQQ 72 + + Q Sbjct 64 KINPESPNIQ 73 >sp|O00571|DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sapiens OX=9606 GN=DDX3X PE=1 SV=3 Length=662 Score = 320 bits (821), Expect = 3e-98, Method: Composition-based stats. Identities = 96/410 (23%), Positives = 157/410 (38%), Gaps = 69/410 (17%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF---------------LPNAPKALI 291 K +A ++ G +Q+ P +L+ Sbjct 212 PIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLV 271 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 + P+RELA Q ++F ++R ++ GG Q+ LE G ++V TPGRL Sbjct 272 LAPTRELAVQIYEEARKFS---YRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLV 328 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 D++ GK+ L ++LVLDEAD +L G+ I R+ Q ++ SAT Sbjct 329 DMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ--DTMPPKGVRHTMMFSATFP 386 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 +++ L+ + ++ + S + + VV V R + Sbjct 387 K-EIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSF--------------- 430 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 K ++F TK D+LE + +G Sbjct 431 ------------------------LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG- 465 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V +VIN Sbjct 466 --------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFD 517 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 LP + + YVHRIGR GR +GLA S + + + Sbjct 518 LPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEV 567 Score = 100 bits (250), Expect = 9e-21, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 133/394 (34%), Gaps = 84/394 (21%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS++ + I +E + PT +Q +IP+I D++ A+TGSGKT AF +P+ Sbjct 179 IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPI 238 Query 61 IQIVY--------ETLKDQ-QEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS----- 106 + +Y +K+ + G++ + I + + + Y+ F+ S Sbjct 239 LSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC 298 Query 107 -----DGLCCQSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 + Q R+++ H AT G + V ++G ++G + Sbjct 299 VVYGGADIGQQIRDLERGCHLLVATPGRL-------VDMMERG--KIG--LDFCKYLVLD 347 Query 161 DKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPP 220 + + + F+ DT+ P Sbjct 348 EAD---------RMLDMGFEPQIRRIVEQDTM-------------------------PPK 373 Query 221 HMKNQALFPACVLKNAEL--KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 +++ +F A K ++ + E F + G + + V+ + + Sbjct 374 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLD 433 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 L+ ++ + ++ + I G + RD+ L Sbjct 434 LLNATGKDSLTLVFVETK-------KGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQ 486 Query 339 ----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 I+V T V+ L++S V+ ++ Sbjct 487 FRSGKSPILVAT------AVAARGLDISNVKHVI 514 >sp|Q81DF9|CSHE_BACCR DEAD-box ATP-dependent RNA helicase CshE OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=cshE PE=2 SV=1 Length=458 Score = 314 bits (805), Expect = 3e-98, Method: Composition-based stats. Identities = 114/452 (25%), Positives = 194/452 (43%), Gaps = 69/452 (15%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + + KN +LG++ ++ + A ++ + + +K Sbjct 1 MVYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVILS--------GKDIIGQAKTG 52 Query 263 DGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 G + ++ + +ALIV P+RELA Q IK+ + + L Sbjct 53 TGKTLAFVLPILEKI---DPECSDVQALIVAPTRELALQITTEIKKML--VQREDINVLA 107 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 I GG QL L+ IVV TPGRL D + ++LS + +VLDEAD +L G+ Sbjct 108 IYGGQDVAQQLRKLKGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLY 167 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I + ++ P Q ++ SAT+ D+KKL+++ M P + ++ E+ DT+ Sbjct 168 DIEDILDETPGSK------QTMLFSATMPK-DIKKLAKRYMDEPQMIQVQSEEVTVDTIE 220 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V+ E K + + Sbjct 221 QRVI----------------------------------------ETTDRAKPDALRFVMD 240 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + A+IFCRTK+ L KG ++C LHGD +R++ ++ F+ Sbjct 241 RDQPFLAVIFCRTKVRASKLYDNL---------KGLGYNCAELHGDIPQAKRERVMKSFR 291 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + +++LI TDVAARG+D+ GV +V N +P++ ++Y+HRIGR GRA GLAI+ VA + Sbjct 292 EAKIQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAK 351 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 EK + + G +++ + N Sbjct 352 DEKHLEEIEKTLGAPIQREIIEQPKIKRVDEN 383 Score = 95.2 bits (235), Expect = 3e-19, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 9/109 (8%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E+G+ + E T IQ ++IP+IL G D++ A+TG+GKT AF +P+ Sbjct 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 ++ + D Q + + + + + + Sbjct 64 LEKIDPECSDVQ---------ALIVAPTRELALQITTEIKKMLVQREDI 103 >sp|Q6CT85|RRP3_KLULA ATP-dependent rRNA helicase RRP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=RRP3 PE=3 SV=1 Length=487 Score = 315 bits (806), Expect = 4e-98, Method: Composition-based stats. Identities = 108/463 (23%), Positives = 177/463 (38%), Gaps = 76/463 (16%) Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL-----PNAPK-ALIVEP 294 N + K D + SG L P A I+ P Sbjct 84 NLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQLWHDQQPYYACILAP 143 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV 354 +RELA+Q + +R I+GG++ DQ L I++ TPGRL D + Sbjct 144 TRELAQQIKETFDSLGSLMG---VRSTCIVGGMSMMDQARDLMRKPHIIIATPGRLMDHL 200 Query 355 -STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 +T NL ++++LV+DEAD LL + ++R+ N IP + + SAT+ S Sbjct 201 ENTKGFNLRKLKYLVMDEADRLLDMEFGPVLDRILNIIP-----TQGRTTYLFSATMTS- 254 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 + KL + P + + DT+ ++ V Sbjct 255 KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVP------------------------ 290 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 LK + + + E I+F RTK + + + Sbjct 291 ----------------GGLKNTFLIYLLNEFIGKSTIVFTRTKANAERISNL-------- 326 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP 593 +FS LHGD ++R L+ FK G L+ TDVAARG+DI V VIN +P Sbjct 327 -CNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIP 385 Query 594 DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + ++Y+HR+GR RA R G +ISLV+ ++ + GK + +D Sbjct 386 VDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGKKLPKENVDKDA------ 439 Query 654 NEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAA 696 + + + ++ +V ++ E + + R A Sbjct 440 -----ILALRDSVDKANGEVVMELNRRNKEKQARGKGRRGRMA 477 Score = 101 bits (251), Expect = 3e-21, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 48/69 (70%), Gaps = 3/69 (4%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 +E+ ++PE+ +A + +++ PT IQ+++IP L G D++ A+TGSGKT AF+IP++ + Sbjct 70 TELDLVPELIEACKNLNYNKPTPIQSKAIPPALKGSDIIGLAQTGSGKTAAFAIPILNQL 129 Query 65 YETLKDQQE 73 + DQQ Sbjct 130 WH---DQQP 135 >sp|Q29S22|DDX47_BOVIN Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus OX=9913 GN=DDX47 PE=2 SV=1 Length=457 Score = 313 bits (803), Expect = 4e-98, Method: Composition-based stats. Identities = 104/500 (21%), Positives = 185/500 (37%), Gaps = 73/500 (15%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K KDLG+ + ++ + + L++ G Sbjct 25 TKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL--------QGRDIIGLAETGSGK 76 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + P AL++ P+RELA Q + + ++ +I+G Sbjct 77 TGAFALPI---LNALLETPQRLFALVLTPTRELAFQISEQFEALG---SSIGVQCAVIVG 130 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ + Q L IV+ TPGRL D + +T NL +++LV+DEAD +L+ + + Sbjct 131 GIDSMSQSLALAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 190 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 +++ IP + + + SAT+ V+KL + P + + + + Sbjct 191 DKILKVIP------RDRKTFLFSATMTK-KVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 243 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K K Y V + E Sbjct 244 YLFIPSK----------------------------------------FKDTYLVYILNEL 263 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + +IFC T + G F+ + LHG +R +L +FK Sbjct 264 AGNSFMIFCSTCNNTQRTALLLRNLG---------FTAIPLHGQMSQSKRLGSLNKFKAK 314 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVA+RG+DI V V+N +P ++Y+HR+GR RA R G AI+ V Sbjct 315 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 374 Query 625 KVWYHVCSSRGKGC--YNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 +++ + GK + T+ E T E Q + +E + + + D Sbjct 375 ELFQRIEHLIGKKLPVFPTQDDEVMMLTERVTEAQRFARMELREHGEKKKRSREDVGDND 434 Query 683 EFDGKVTYGQKRAAGGGSYK 702 + +G + K A G + Sbjct 435 DTEGAIGVRNKVAGGKMKKR 454 Score = 103 bits (257), Expect = 5e-22, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++GV + +A +++ W PT IQ E+IPL L G D++ AETGSGKTGAF++P++ Sbjct 26 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 85 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + ET + + + ++ A C Sbjct 86 NALLET---------PQRLFALVLTPTRELAFQISEQFEALGSSIGVQCA 126 >sp|Q9H0S4|DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens OX=9606 GN=DDX47 PE=1 SV=1 Length=455 Score = 313 bits (803), Expect = 4e-98, Method: Composition-based stats. Identities = 103/500 (21%), Positives = 185/500 (37%), Gaps = 73/500 (15%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K KDLG+ + ++ + + L++ G Sbjct 23 TKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLAL--------QGRDIIGLAETGSGK 74 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + P AL++ P+RELA Q + + ++ +I+G Sbjct 75 TGAFALPI---LNALLETPQRLFALVLTPTRELAFQISEQFEALG---SSIGVQSAVIVG 128 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ + Q L I++ TPGRL D + +T NL +++LV+DEAD +L+ + + Sbjct 129 GIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEV 188 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 +++ IP + + + SAT+ V+KL + P + + + + Sbjct 189 DKILKVIP------RDRKTFLFSATMTK-KVQKLQRAALKNPVKCAVSSKYQTVEKLQQY 241 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K K Y V + E Sbjct 242 YIFIPSK----------------------------------------FKDTYLVYILNEL 261 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + +IFC T + G F+ + LHG +R +L +FK Sbjct 262 AGNSFMIFCSTCNNTQRTALLLRNLG---------FTAIPLHGQMSQSKRLGSLNKFKAK 312 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVA+RG+DI V V+N +P ++Y+HR+GR RA R G AI+ V Sbjct 313 ARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDV 372 Query 625 KVWYHVCSSRGKGC--YNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 +++ + GK + T+ E T E Q + +E + + + D Sbjct 373 ELFQRIEHLIGKKLPGFPTQDDEVMMLTERVAEAQRFARMELREHGEKKKRSREDAGDND 432 Query 683 EFDGKVTYGQKRAAGGGSYK 702 + +G + K A G + Sbjct 433 DTEGAIGVRNKVAGGKMKKR 452 Score = 102 bits (254), Expect = 1e-21, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 61/139 (44%), Gaps = 20/139 (14%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++GV + +A +++ W PT IQ E+IPL L G D++ AETGSGKTGAF++P++ Sbjct 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI-----------GSDGLC 110 + ET + + + ++ A G D + Sbjct 84 NALLET---------PQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMS 134 Query 111 CQSREVKEWHGCRATKGLM 129 K+ H AT G + Sbjct 135 QSLALAKKPHIIIATPGRL 153 >sp|Q8LA13|RH11_ARATH DEAD-box ATP-dependent RNA helicase 11 OS=Arabidopsis thaliana OX=3702 GN=RH11 PE=1 SV=1 Length=612 Score = 318 bits (816), Expect = 5e-98, Method: Composition-based stats. Identities = 102/397 (26%), Positives = 162/397 (41%), Gaps = 57/397 (14%) Query 252 KDGFVALSKAPDGYIVKSQHSGNA--QVTQTKFLPNA-----PKALIVEPSRELAEQTLN 304 + +A ++ G + Q P P A+I+ P+RELA Q + Sbjct 188 ERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHD 247 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 K+F ++ ++ GG QL LE G DI+V TPGRL+DL+ ++++ + Sbjct 248 EAKKFS---YQTGVKVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMI 304 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 RFL LDEAD +L G+ I ++ Q+ Q ++ SAT S +++L+ M Sbjct 305 RFLALDEADRMLDMGFEPQIRKIVEQMD--MPPRGVRQTMLFSATFPSQ-IQRLAADFMS 361 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 ++ + S D + V V R Sbjct 362 NYIFLAVGRVGSSTDLITQRVEFVQESDKR------------------------------ 391 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 L + + K ++F TK D LE + ++F Sbjct 392 -----SHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCM---------NEFPATS 437 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +HGDR ER+ L FK G L+ TDVAARG+DI V +V+N LP++ +YVHRIG Sbjct 438 IHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIG 497 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 R GRA + G+A + ++ + + Sbjct 498 RTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEV 534 Score = 102 bits (255), Expect = 2e-21, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 52/107 (49%), Gaps = 7/107 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+++ + + + ++ PT +Q +IP++L D++ A+TGSGKT AF P+ Sbjct 150 VNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPI 209 Query 61 IQIVYETLKDQQ-EGKKGKTTIKTGA---SVLNKWQMNPYDRGSAFA 103 I + +KDQ E +G + A S + +D F+ Sbjct 210 ISGI---MKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFS 253 >sp|Q5A4E2|DED1_CANAL ATP-dependent RNA helicase DED1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DED1 PE=3 SV=1 Length=672 Score = 320 bits (820), Expect = 5e-98, Method: Composition-based stats. Identities = 96/355 (27%), Positives = 151/355 (43%), Gaps = 55/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P L++ P+REL Q K+F +R ++ GG Q+ ++ G D++V T Sbjct 270 PTILVMAPTRELVSQIYEESKKFS---YRSWVRACVVYGGADIGQQMRNMDRGCDLLVAT 326 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ GK++L+ +R+LVLDEAD +L G+ I + + K Q ++ Sbjct 327 PGRLKDLLDRGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECD--MPAVKDRQTLMF 384 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L+ + ++ + S + + ++ V Sbjct 385 SATFP-RDIQMLARDFLKDYVFLSVGRVGSTSENITQKILYVEDDE-------------- 429 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + + ++ I+F TK DNL Y Sbjct 430 --------------------------KKSVILDLLSANENGLTIVFTETKRMADNLADYL 463 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 QG F +HGDR +ER++ L FK G L+ T VAARG+DI V + Sbjct 464 YDQG---------FPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNVSH 514 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VIN LP + +YVHRIGR GRA +G+A + + V + + Sbjct 515 VINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGLIELLSEANQEV 569 Score = 93.3 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F+ + + + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 185 ITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 244 Query 61 IQIVYETLKDQQEGKKGK------TTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + Y G + + Y+ F+ S Sbjct 245 LSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFSYRS 296 >sp|A5A6J2|DDX5_PANTR Probable ATP-dependent RNA helicase DDX5 OS=Pan troglodytes OX=9598 GN=DDX5 PE=2 SV=1 Length=614 Score = 318 bits (815), Expect = 6e-98, Method: Composition-based stats. Identities = 106/470 (23%), Positives = 178/470 (38%), Gaps = 72/470 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 N + + + Q ++ + V +++ G Sbjct 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLD--------MVGVAQTGSGKT 145 Query 267 VKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + FL + P L++ P+RELA+Q +Y +L+ I Sbjct 146 LSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVA---AEYCRACRLKSTCIY 202 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG Q+ LE GV+ + TPGRL D + GK NL + +LVLDEAD +L G+ I Sbjct 203 GGAPKGPQIRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQI 262 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHH 443 ++ +QI Q ++ SAT +V++L+E + +++ E S + Sbjct 263 RKIVDQI------RPDRQTLMWSATWPK-EVRQLAEDFLKDYIHINIGALELSANHNILQ 315 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 +V + + K K + I Sbjct 316 IVDVCH-------------------------------------DVEKDEKLIRLMEEIMS 338 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 K ++ I+F TK CD L + + G + + +HGD+ ER L FK Sbjct 339 EKENKTIVFVETKRRCDELTRKMRRDG---------WPAMGIHGDKSQQERDWVLNEFKH 389 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G LI TDVA+RG+D+ V +VIN P+ ++Y+HRIGR R+ + G A + Sbjct 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449 Query 624 EKVWYHVCSSRGKGCYN-----TRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 K + S + +L ED G + + + + Sbjct 450 IKQVSDLISVLREANQAINPKLLQLVEDRGSGRSRGRGGMKDDRRDRYSA 499 Score = 88.3 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (44%), Gaps = 4/94 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + ++ PT IQA+ P+ L G D++ A+TGSGKT ++ +P Sbjct 93 VLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPA 152 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 I + Q ++G I + + Sbjct 153 IVHI----NHQPFLERGDGPICLVLAPTRELAQQ 182 >sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=RRP3 PE=3 SV=1 Length=485 Score = 314 bits (804), Expect = 6e-98, Method: Composition-based stats. Identities = 107/504 (21%), Positives = 187/504 (37%), Gaps = 83/504 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K+ KDLG+ + + ++ + + L++ G Sbjct 58 TKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLAL--------QGRDLIGLAETGSGK 109 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + P + LI+ P+RELA Q + I +R +I+G Sbjct 110 TAAFALPI---LQALMNKPQSLFGLILAPTRELACQISEAFEALGSLIS---VRCAVIVG 163 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ Q L I+V TPGRL D + +T +L +++LV+DEAD LL + + Sbjct 164 GMDMVSQAISLGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPIL 223 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHH 443 +++ +P + + + SAT+ S V+ L + P V + T+ Sbjct 224 DKILKVLP------RERRTYLFSATM-SSKVESLQRASLSNPLRVSISSNKYQTVATLLQ 276 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + + K K Y V + E Sbjct 277 SYLFIPHK----------------------------------------YKDIYLVYLLNE 296 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + AI+F RT + L G F + LHG R L +F+ Sbjct 297 YAGQSAIVFTRTVNETQRLAILLRALG---------FGSIPLHGQLSQSSRLGALSKFRS 347 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 L+ TDVAARG+DI V V+N LP + + Y+HR+GR RA + G A S+V Sbjct 348 RSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTYIHRVGRTARAGKSGHAFSIVTQYD 407 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 +VW + ++ GK +++++ + + E + H + + Sbjct 408 IEVWLRIENALGKKLDEYKVEKEEVMVL----SDRVGEAQRHAITEMKDLH-----EKRG 458 Query 684 FDGKVTYGQKRAAGGGSYKGHVDI 707 G G++ A G + +G ++ Sbjct 459 SRGATLKGRRPAKG--AKRGRDEM 480 Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G++ + +A E + + PT IQAESIPL L G D++ AETGSGKT AF++P++ Sbjct 59 KSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL 118 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + K ++ + + + A C Sbjct 119 QALM---------NKPQSLFGLILAPTRELACQISEAFEALGSLISVRCA 159 >sp|P16381|DDX3L_MOUSE Putative ATP-dependent RNA helicase Pl10 OS=Mus musculus OX=10090 GN=D1Pas1 PE=1 SV=1 Length=660 Score = 319 bits (818), Expect = 8e-98, Method: Composition-based stats. Identities = 96/410 (23%), Positives = 157/410 (38%), Gaps = 69/410 (17%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF---------------LPNAPKALI 291 K +A ++ G +Q+ P +L+ Sbjct 211 PIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLV 270 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 + P+RELA Q ++F ++R ++ GG Q+ LE G ++V TPGRL Sbjct 271 LAPTRELAVQIYEEARKFS---YRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLV 327 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 D++ GK+ L ++LVLDEAD +L G+ I R+ Q ++ SAT Sbjct 328 DMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ--DTMPPKGVRHTMMFSATFP 385 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 +++ L+ + ++ + S + + VV V R + Sbjct 386 K-EIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSF--------------- 429 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 K ++F TK D+LE + +G Sbjct 430 ------------------------LLDLLNATGKDSLILVFVETKKGADSLEDFLYHEG- 464 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V +VIN Sbjct 465 --------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFD 516 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 LP + + YVHRIGR GR +GLA S + + + Sbjct 517 LPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEV 566 Score = 100 bits (250), Expect = 9e-21, Method: Composition-based stats. Identities = 63/394 (16%), Positives = 134/394 (34%), Gaps = 84/394 (21%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS++ + I +E + PT +Q +IP+I D++ A+TGSGKT AF +P+ Sbjct 178 IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPI 237 Query 61 IQIVY-----ETLKDQQE----GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS----- 106 + +Y E L+ +E G++ + I + + + Y+ F+ S Sbjct 238 LSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC 297 Query 107 -----DGLCCQSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 + Q R+++ H AT G + V ++G ++G + Sbjct 298 VVYGGADIGQQIRDLERGCHLLVATPGRL-------VDMMERG--KIG--LDFCKYLVLD 346 Query 161 DKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPP 220 + + + F+ DT+ P Sbjct 347 EAD---------RMLDMGFEPQIRRIVEQDTM-------------------------PPK 372 Query 221 HMKNQALFPACVLKNAEL--KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 +++ +F A K ++ + E F + G + + V+ + + Sbjct 373 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEADKRSFLLD 432 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 L+ ++ + ++ + I G + RD+ L Sbjct 433 LLNATGKDSLILVFVETK-------KGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQ 485 Query 339 ----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 I+V T V+ L++S V+ ++ Sbjct 486 FRSGKSPILVAT------AVAARGLDISNVKHVI 513 >sp|A4RGD1|RRP3_PYRO7 ATP-dependent rRNA helicase RRP3 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=RRP3 PE=3 SV=1 Length=538 Score = 315 bits (808), Expect = 1e-97, Method: Composition-based stats. Identities = 107/504 (21%), Positives = 184/504 (37%), Gaps = 81/504 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K+ +DLG+ + + ++ + + +++ G Sbjct 109 TKSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLAL--------QGRDVIGIAETGSGK 160 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + P L++ P+RELA Q + + LR +++G Sbjct 161 TAAFALPI---LQSLLEKPQPLFGLVLAPTRELAAQIGQTFEALGA---SISLRCAVVVG 214 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ Q + L IVV TPGRL D + T +L ++FLV+DEAD LL + + Sbjct 215 GLDMVSQSTALGKKPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPIL 274 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHH 443 +++ +P + + + SAT+ S V+ L + P V + ++ T+ Sbjct 275 DKILKFLP------RERRTFLFSATM-SSKVESLQRASLRDPLKVSVSSSQEKTVSTLIQ 327 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + + K K Y + E Sbjct 328 NPLFIPHKH----------------------------------------KDVYLIYLANE 347 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 I+F RT + + + F + LHG R L +FK Sbjct 348 FAGKTTIVFTRTVNEAQRVSILL---------RTLSFGAIPLHGQLSQSMRLGALNKFKA 398 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 L+ TDVAARG+DI V VIN +P + Y+HR+GR RA R G AIS++ Sbjct 399 RSRDILVATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAGRSGRAISIITQYD 458 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 ++W + + G + D + + E + E + H + + D Sbjct 459 LELWLRIEKAALNGRKLPLFQPDKEEVMVFKER--VEEAQRHAREEMKALHED-----RG 511 Query 684 FDGKVTYGQKRAAGGGSYKGHVDI 707 G V G+KR G + + H D+ Sbjct 512 KKGAVLKGRKR--GSATKRRHDDM 533 Score = 106 bits (265), Expect = 9e-23, Method: Composition-based stats. Identities = 28/67 (42%), Positives = 45/67 (67%), Gaps = 0/67 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G++ + +A E + + PT IQ ++IPL L G DV+ AETGSGKT AF++P++ Sbjct 110 KSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPIL 169 Query 62 QIVYETL 68 Q + E Sbjct 170 QSLLEKP 176 >sp|Q9P6N8|RRP3_SCHPO ATP-dependent rRNA helicase rrp3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp3 PE=3 SV=1 Length=465 Score = 313 bits (801), Expect = 1e-97, Method: Composition-based stats. Identities = 109/483 (23%), Positives = 186/483 (39%), Gaps = 75/483 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K K+LG+ E+ + ++ + K + L++ G Sbjct 46 KTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLN--------KRDVIGLAQTGSGKT 97 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + + P+ A+++ P+RELA Q + + +R ++I+GG Sbjct 98 AAFAL---PVIQELWNNPSPFFAVVLAPTRELAYQISEQFEAIG---GSIGVRSVVIVGG 151 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L ++V TPGRL D + +T +L +++L++DEAD LL + I+ Sbjct 152 MDMVTQAVALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIID 211 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ IP + ++ SAT+ S V+KL +H P V + + S DT+ Sbjct 212 KILKIIPH------ERRTLLFSATMTS-KVEKLQRASLHQPVRVAVSSKFSTVDTLIQRY 264 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + K K Y V + E Sbjct 265 LFFPFKH----------------------------------------KDTYLVYLVNELA 284 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + IIF RT D L G FS + LHG R L +FK G Sbjct 285 GNSIIIFARTVNDTQRLAILLRTLG---------FSAIPLHGQLSQSNRLGALNKFKSGA 335 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TDVAARG+DI V VIN +P + + Y+HR+GR RA R G +I+LV + Sbjct 336 RSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLE 395 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + + ++ GK + ++G + + + E + + ++ K Sbjct 396 PFLRIEATIGKKMQEYEIDKEGVFLL----SERVGEAQREAIIQMKEIHDRRKSKGKLHT 451 Query 686 GKV 688 + Sbjct 452 KRK 454 Score = 102 bits (255), Expect = 8e-22, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 9/106 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E+GV+ E+ +A E++ + PT IQ E+IP++L DV+ A+TGSGKT AF++PVI Sbjct 46 KTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVI 105 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 Q ++ + + ++ A Sbjct 106 QELWNNPSPF---------FAVVLAPTRELAYQISEQFEAIGGSIG 142 >sp|Q62167|DDX3X_MOUSE ATP-dependent RNA helicase DDX3X OS=Mus musculus OX=10090 GN=Ddx3x PE=1 SV=3 Length=662 Score = 319 bits (817), Expect = 1e-97, Method: Composition-based stats. Identities = 96/410 (23%), Positives = 157/410 (38%), Gaps = 69/410 (17%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF---------------LPNAPKALI 291 K +A ++ G +Q+ P +L+ Sbjct 212 PIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLV 271 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 + P+RELA Q ++F ++R ++ GG Q+ LE G ++V TPGRL Sbjct 272 LAPTRELAVQIYEEARKFS---YRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLV 328 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 D++ GK+ L ++LVLDEAD +L G+ I R+ Q ++ SAT Sbjct 329 DMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ--DTMPPKGVRHTMMFSATFP 386 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 +++ L+ + ++ + S + + VV V R + Sbjct 387 K-EIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSF--------------- 430 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 K ++F TK D+LE + +G Sbjct 431 ------------------------LLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEG- 465 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V +VIN Sbjct 466 --------YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFD 517 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 LP + + YVHRIGR GR +GLA S + + + Sbjct 518 LPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEV 567 Score = 101 bits (251), Expect = 6e-21, Method: Composition-based stats. Identities = 61/394 (15%), Positives = 133/394 (34%), Gaps = 84/394 (21%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS++ + I +E + PT +Q +IP+I D++ A+TGSGKT AF +P+ Sbjct 179 IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPI 238 Query 61 IQIVY--------ETLKDQ-QEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS----- 106 + +Y +K+ + G++ + I + + + Y+ F+ S Sbjct 239 LSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC 298 Query 107 -----DGLCCQSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 + Q R+++ H AT G + V ++G ++G + Sbjct 299 VVYGGAEIGQQIRDLERGCHLLVATPGRL-------VDMMERG--KIG--LDFCKYLVLD 347 Query 161 DKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPP 220 + + + F+ DT+ P Sbjct 348 EAD---------RMLDMGFEPQIRRIVEQDTM-------------------------PPK 373 Query 221 HMKNQALFPACVLKNAEL--KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 +++ +F A K ++ + E F + G + + V+ + + Sbjct 374 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLD 433 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 L+ ++ + ++ + I G + RD+ L Sbjct 434 LLNATGKDSLTLVFVETK-------KGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQ 486 Query 339 ----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 I+V T V+ L++S V+ ++ Sbjct 487 FRSGKSPILVAT------AVAARGLDISNVKHVI 514 >sp|Q5RF43|DDX3Y_PONAB ATP-dependent RNA helicase DDX3Y OS=Pongo abelii OX=9601 GN=DDX3Y PE=2 SV=1 Length=658 Score = 318 bits (816), Expect = 1e-97, Method: Composition-based stats. Identities = 96/406 (24%), Positives = 162/406 (40%), Gaps = 71/406 (17%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVT---------------QTKFLPNAPKALIVEPSR 296 K +A ++ G +Q+ + P +L++ P+R Sbjct 215 KRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTR 274 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 ELA Q ++F ++R ++ GG Q+ LE G ++V TPGRL D++ Sbjct 275 ELAVQIYEEARKFS---YRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMER 331 Query 357 GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVK 416 GK+ L ++LVLDEAD +L G+ I R+ Q ++ SAT +++ Sbjct 332 GKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ--DTMPPKGVRHTMMFSATFPK-EIQ 388 Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 L+ + ++ + S + + VV V Sbjct 389 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVE--------------------------- 421 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQYFIQQGGGPDK 535 + K + + + D ++F TK D+LE + +G Sbjct 422 -------------DLDKRSFLLDLLGATGRDSLTLVFVETKKGADSLEDFLYHEG----- 463 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V +VIN LP + Sbjct 464 ----YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSD 519 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 + YVHRIGR GR +GLA S + + + + Sbjct 520 IEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEV 565 Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 66/394 (17%), Positives = 134/394 (34%), Gaps = 84/394 (21%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS++ + I +E + PT +Q +IP+I G D++ A+TGSGKT AF +P+ Sbjct 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPI 236 Query 61 IQIVY-----ETLKDQQE----GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS----- 106 + +Y E LK +E G++ + I + + + Y+ F+ S Sbjct 237 LSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC 296 Query 107 -----DGLCCQSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 + Q R+++ H AT G + V ++G ++G + Sbjct 297 VVYGGADIGQQIRDLERGCHLLVATPGRL-------VDMMERG--KIG--LDFCKYLVLD 345 Query 161 DKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPP 220 + + + F+ DT+ P Sbjct 346 EAD---------RMLDMGFEPQIRRIVEQDTM-------------------------PPK 371 Query 221 HMKNQALFPACVLKNAEL--KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 +++ +F A K ++ + E F + G + + V+ + + Sbjct 372 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLD 431 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 L+ ++ + ++ + I G + RD+ L Sbjct 432 LLGATGRDSLTLVFVETK-------KGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQ 484 Query 339 ----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 I+V T V+ L++S VR ++ Sbjct 485 FRSGKSPILVAT------AVAARGLDISNVRHVI 512 >sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rrp3 PE=3 SV=1 Length=472 Score = 313 bits (801), Expect = 1e-97, Method: Composition-based stats. Identities = 107/503 (21%), Positives = 183/503 (36%), Gaps = 87/503 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ K+LGL ++ + ++ + + L++ G Sbjct 52 KSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLAL--------QGRDLIGLAETGSGKT 103 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P++ L++ P+RELA Q + I +R +++GG Sbjct 104 AAFALPI---LQALMDKPSSFFGLVLAPTRELAYQISQAFEGLGSTIS---VRSTVLVGG 157 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L I+V TPGRL D + +T +L +++LV+DEAD LL + ++ Sbjct 158 MDMVSQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILD 217 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHV 444 ++ +P + + + SAT+ S V+ L + P V + T+ Sbjct 218 KILKVLP------RERRTYLFSATM-SSKVESLQRASLQNPLRVAVSSSKFQTVSTLQQS 270 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K K Y V + E Sbjct 271 YIFIPHKH----------------------------------------KDLYLVYLLNEF 290 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 IIFCRT + L + G F + LHG R L +F+ Sbjct 291 VGQSCIIFCRTVHETQRLSFFLRLLG---------FGAIPLHGQLSQSARLGALGKFRSR 341 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V V+N LP + + ++HRIGR RA + G+AIS Sbjct 342 SRDILVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKSGVAISFATQYDV 401 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 + W + + GK ++D L +S+ + + + + Sbjct 402 EAWLRIEGALGKKLPEYPAEKDEVMV---------------LAERVSEAQRSAILEMKNY 446 Query 685 DGKVTYGQKRAAGGGSYKGHVDI 707 D K K+ A G + +D Sbjct 447 DEKKGSRGKKFAKGKRSREDMDQ 469 Score = 105 bits (262), Expect = 1e-22, Method: Composition-based stats. Identities = 30/94 (32%), Positives = 51/94 (54%), Gaps = 9/94 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G++ ++ +A + M + PT IQAE+IPL L G D++ AETGSGKT AF++P++ Sbjct 52 KSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPIL 111 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 Q + + K + + + Sbjct 112 QALMD---------KPSSFFGLVLAPTRELAYQI 136 >sp|O15523|DDX3Y_HUMAN ATP-dependent RNA helicase DDX3Y OS=Homo sapiens OX=9606 GN=DDX3Y PE=1 SV=2 Length=660 Score = 318 bits (816), Expect = 2e-97, Method: Composition-based stats. Identities = 96/406 (24%), Positives = 162/406 (40%), Gaps = 71/406 (17%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVT---------------QTKFLPNAPKALIVEPSR 296 K +A ++ G +Q+ + P +L++ P+R Sbjct 215 KRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTR 274 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 ELA Q ++F ++R ++ GG Q+ LE G ++V TPGRL D++ Sbjct 275 ELAVQIYEEARKFS---YRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMER 331 Query 357 GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVK 416 GK+ L ++LVLDEAD +L G+ I R+ Q ++ SAT +++ Sbjct 332 GKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ--DTMPPKGVRHTMMFSATFPK-EIQ 388 Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 L+ + ++ + S + + VV V Sbjct 389 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVE--------------------------- 421 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQYFIQQGGGPDK 535 + K + + + D ++F TK D+LE + +G Sbjct 422 -------------DLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEG----- 463 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V +VIN LP + Sbjct 464 ----YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSD 519 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 + YVHRIGR GR +GLA S + + + + Sbjct 520 IEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEV 565 Score = 98.7 bits (244), Expect = 4e-20, Method: Composition-based stats. Identities = 66/394 (17%), Positives = 135/394 (34%), Gaps = 84/394 (21%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS++ + I +E + PT +Q +IP+I G D++ A+TGSGKT AF +P+ Sbjct 177 IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPI 236 Query 61 IQIVY-----ETLKDQQE----GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS----- 106 + +Y E LK +E G++ + I + + + Y+ F+ S Sbjct 237 LSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC 296 Query 107 -----DGLCCQSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT 160 + Q R+++ H AT G + V ++G ++G + Sbjct 297 VVYGGADIGQQIRDLERGCHLLVATPGRL-------VDMMERG--KIG--LDFCKYLVLD 345 Query 161 DKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPP 220 + + + F+ DT+ P Sbjct 346 EAD---------RMLDMGFEPQIRRIVEQDTM-------------------------PPK 371 Query 221 HMKNQALFPACVLKNAEL--KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 +++ +F A K ++ + E F + G + + V+ + + Sbjct 372 GVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLD 431 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + L+ ++ + ++ + I G + RD+ L Sbjct 432 ILGATGSDSLTLVFVETK-------KGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQ 484 Query 339 ----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 I+V T V+ L++S VR ++ Sbjct 485 FRSGKSPILVAT------AVAARGLDISNVRHVI 512 >sp|Q4P3U9|RRP3_USTMA ATP-dependent rRNA helicase RRP3 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=RRP3 PE=3 SV=2 Length=561 Score = 315 bits (807), Expect = 2e-97, Method: Composition-based stats. Identities = 107/505 (21%), Positives = 180/505 (36%), Gaps = 82/505 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 DLG+ +I N ++ + + L++ G Sbjct 118 DLGVIPQIVEACTNMGFKHPTPIQVKAIPEAL--------QARDVIGLAQTGSGKTAAFT 169 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + P A ++ P+RELA Q ++ I +R I+GG+ Sbjct 170 IPI---LQALWDNPKPFFACVLAPTRELAYQISQQVEALGSTIG---VRSATIVGGMDMM 223 Query 331 DQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 Q L ++V TPGRL D + +T +L +++LV+DEAD LL + I+++ Sbjct 224 SQSIALSKRPHVIVATPGRLQDHLENTKGFSLRGLQYLVMDEADRLLDMDFGPIIDKLLQ 283 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 IP + + ++ SAT+ + V KL + P V++ + + T+ + + Sbjct 284 SIP------RERRTMLFSATMTT-KVAKLQRASLKNPVRVEVDTKYTTVSTLKQHYMFMP 336 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 K Y V E Sbjct 337 FAH----------------------------------------KDTYLVHLANEQAGHSI 356 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 I+F RT D L G F + LHG R L +FK G L Sbjct 357 IVFTRTVHDSQRLSILLRLLG---------FPAIPLHGQLSQQARLGALNKFKTGGRSIL 407 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TDVA+RG+DI V V+N +P ++Y+HR+GR RA R G +++LV ++ Sbjct 408 VATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTARAGRSGRSVTLVTQYDVELLQR 467 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVT 689 + + G ++ E G M L + E + ++ Sbjct 468 IEAVIG-----LKMTEFPGGNDKEAVMLLSERVAEAHRAAVREL------KDKGVGSAGG 516 Query 690 YGQKRAAGGGSYKGHVDILAPTVQE 714 G+++ G Y +D VQ Sbjct 517 SGKRKRKMDGKYGDDMDRDDDQVQA 541 Score = 108 bits (269), Expect = 3e-23, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 62/139 (45%), Gaps = 20/139 (14%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++GV+P+I +A M + PT IQ ++IP L DV+ A+TGSGKT AF+IP++Q Sbjct 116 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 175 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS--------DGLCCQSRE 115 +++ K + + + A G+ S+ Sbjct 176 LWDNPKPF---------FACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDMMSQS 226 Query 116 V---KEWHGCRATKGLMKG 131 + K H AT G ++ Sbjct 227 IALSKRPHVIVATPGRLQD 245 >sp|A2RB17|RRP3_ASPNC ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=rrp3 PE=3 SV=1 Length=467 Score = 312 bits (799), Expect = 2e-97, Method: Composition-based stats. Identities = 104/458 (23%), Positives = 170/458 (37%), Gaps = 72/458 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 SK K+LG+ ++ + ++ + + L++ G Sbjct 47 SKTFKELGIIEQLCEACETMGYKAPTPIQRESIPLAL--------KGRDLIGLAETGSGK 98 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + P L++ P+RELA Q + + + +R +I+G Sbjct 99 TAAFALPI---LQALMEKPQPFFGLVLAPTRELAYQISKSFESLGA---SMGVRSCVIVG 152 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ Q L I+V TPGRL D + +T +L +++LV+DEAD LL + + Sbjct 153 GMDMVSQSISLGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPLL 212 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK-GEDSVPDTVHH 443 +++ +P + + + SAT+ S V+ L + P V + + T+ Sbjct 213 DKILKVLP------RERRTFLFSATM-SSKVESLQRASLSNPLRVSVSTSKYQTVSTLLQ 265 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + + K K Y V + E Sbjct 266 SYLFIPQKH----------------------------------------KDLYLVYLLNE 285 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 IIF RT + L G F + LHG R L +F+ Sbjct 286 FAGQSTIIFTRTVNETQRLAFLLRALG---------FGAIPLHGQLSQSARLGALGKFRA 336 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 L+ TDVAARG+DI V V+N LP + +YVHR+GR RA + GLAIS VA Sbjct 337 RSRNILVATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGRTARAGKSGLAISFVAQYD 396 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 +VW + + GK +D + N + + Sbjct 397 VEVWLRIEGALGKKLKEYDCPKDEVMVLGENVAEAQRQ 434 Score = 107 bits (267), Expect = 3e-23, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E+G++ ++ +A E M + PT IQ ESIPL L G D++ AETGSGKT AF++P++ Sbjct 48 KTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPIL 107 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + E K + + + + C Sbjct 108 QALME---------KPQPFFGLVLAPTRELAYQISKSFESLGASMGVRSC 148 >sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0911100 PE=2 SV=2 Length=666 Score = 318 bits (815), Expect = 3e-97, Method: Composition-based stats. Identities = 100/419 (24%), Positives = 160/419 (38%), Gaps = 69/419 (16%) Query 221 HMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQT 280 + +++ + +++ G + G V Sbjct 265 AIAKSGFVEPTPIQSQGWPMAL--------KGRDMIGIAQTGSGKTLSYLLPGLVHVGAQ 316 Query 281 KFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 L + P LI+ P+RELA Q +F Y + R I GG Q+ L Sbjct 317 PRLEQGDGPIVLILAPTRELAVQIQQESGKFGSY---SRTRSTCIYGGAPKGPQIRDLRR 373 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 GV+IV+ TPGRL D++ G NL +V +LVLDEAD +L G+ I ++ QI Sbjct 374 GVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQI------R 427 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDRLWE 457 Q + SAT +V+ L+ + + P V + D ++ ++ ++ Sbjct 428 PDRQTLYWSATWP-REVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEH------ 480 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 E + K+L + +IF +TK Sbjct 481 -------------------------EKYPRLSKLLSDL--------MDGSRILIFFQTKK 507 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 DCD + + G + + +HGD+ ER L FK G + TDVAAR Sbjct 508 DCDKVTRQLRMDG---------WPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAAR 558 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 G+D+ + VIN P ++Y+HRIGR GRA G A + K ++ + Sbjct 559 GLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKILRE 617 Score = 99.0 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 9/140 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E QA+ + ++ PT IQ++ P+ L G D++ A+TGSGKT ++ +P + Sbjct 253 FQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVH 312 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 V + +Q G I + + + F G ++R + G Sbjct 313 VGAQPRLEQ----GDGPIVLILAPTRELAVQIQQESGKF-----GSYSRTRSTCIYGGAP 363 Query 124 ATKGLMKGKHYYEVSCHDQG 143 + + E+ G Sbjct 364 KGPQIRDLRRGVEIVIATPG 383 >sp|Q6GVM6|DDX3Y_PANTR ATP-dependent RNA helicase DDX3Y OS=Pan troglodytes OX=9598 GN=DDX3Y PE=2 SV=1 Length=660 Score = 318 bits (814), Expect = 3e-97, Method: Composition-based stats. Identities = 96/406 (24%), Positives = 162/406 (40%), Gaps = 71/406 (17%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVT---------------QTKFLPNAPKALIVEPSR 296 K +A ++ G +Q+ + P +L++ P+R Sbjct 215 KRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTR 274 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 ELA Q ++F ++R ++ GG Q+ LE G ++V TPGRL D++ Sbjct 275 ELAVQIYEEARKFS---YRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMER 331 Query 357 GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVK 416 GK+ L ++LVLDEAD +L G+ I R+ Q ++ SAT +++ Sbjct 332 GKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ--DTMPPKGVRHTMMFSATFPK-EIQ 388 Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 L+ + ++ + S + + VV V Sbjct 389 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVE--------------------------- 421 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQYFIQQGGGPDK 535 + K + + + D ++F TK D+LE + +G Sbjct 422 -------------DLDKRSFLLDILGAAGTDSLTLVFVETKKGADSLEDFLYHEG----- 463 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 ++C +HGDR +R++ L +F+ G L+ T VAARG+DI V +VIN LP + Sbjct 464 ----YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSD 519 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 + YVHRIGR GR +GLA S + + + + Sbjct 520 IEEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEV 565 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 56/115 (49%), Gaps = 9/115 (8%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F ++ + I ++ + PT +Q +IP+I G D++ A+TGSGKT AF +P+ Sbjct 177 IENFGDIDMGEIIMGNIQLTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPI 236 Query 61 IQIVY-----ETLKDQQE----GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + +Y E LK +E G++ + I + + + Y+ F+ S Sbjct 237 LSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRS 291 >sp|Q62095|DDX3Y_MOUSE ATP-dependent RNA helicase DDX3Y OS=Mus musculus OX=10090 GN=Ddx3y PE=1 SV=2 Length=658 Score = 317 bits (813), Expect = 4e-97, Method: Composition-based stats. Identities = 96/410 (23%), Positives = 159/410 (39%), Gaps = 69/410 (17%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT---------------QTKFLPNAPKALI 291 K +A ++ G +Q+ + P +L+ Sbjct 211 PIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLV 270 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 + P+RELA Q ++F ++R ++ GG Q+ LE G ++V TPGRL Sbjct 271 LAPTRELAVQIYEEARKFS---YRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLV 327 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 D++ GK+ L ++LVLDEAD +L G+ I R+ Q ++ SAT Sbjct 328 DMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQ--DTMPPKGVRHTMMFSATFP 385 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 +++ L+ + ++ + S + + VV V R + Sbjct 386 K-EIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEELDKRSF--------------- 429 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 K ++F TK D+LE + Q+ Sbjct 430 ------------------------LLDLLNATGKDSLTLVFVETKKGADSLENFLFQE-- 463 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 +++C +HGDR +R++ L +F+ G L+ T VAARG+DI V +VIN Sbjct 464 -------RYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFD 516 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 LP + + YVHRIGR GR +GLA S + + + Sbjct 517 LPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEV 566 Score = 99.0 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 31/115 (27%), Positives = 56/115 (49%), Gaps = 9/115 (8%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS++ + I +E + PT +Q +IP+I D++ A+TGSGKT AF +P+ Sbjct 178 IENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPI 237 Query 61 IQIVY-----ETLKDQQE----GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + +Y E LK +E G++ + I + + + Y+ F+ S Sbjct 238 LSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRS 292 >sp|Q9M2F9|RH52_ARATH DEAD-box ATP-dependent RNA helicase 52 OS=Arabidopsis thaliana OX=3702 GN=RH52 PE=1 SV=1 Length=646 Score = 317 bits (812), Expect = 4e-97, Method: Composition-based stats. Identities = 115/465 (25%), Positives = 183/465 (39%), Gaps = 68/465 (15%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFP---PK 252 ++ + V + +D+ + F L A L N ++ P + Sbjct 116 VNEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEA-LNLNIQRCKYVKPTPVQR 174 Query 253 DGFVALSKAPDGYIVKSQHSGNA-----------QVTQTKFLPNA-----PKALIVEPSR 296 + L+ D SG Q P P A+I+ P+R Sbjct 175 NAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRGVYPLAVILSPTR 234 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 ELA Q + ++F ++ ++ GG Q+ LE GVDI+V TPGRL+DL+ Sbjct 235 ELACQIHDEARKFS---YQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLER 291 Query 357 GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVK 416 G+++L VRFL LDEAD +L G+ I ++ Q+ Q ++ SAT +++ Sbjct 292 GRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMD--MPPPGVRQTMLFSATFP-REIQ 348 Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L+ + ++ + V TD + +R+ H H D Sbjct 349 RLASDFLSNYIFLAVG--------------RVGSSTDLIVQRVEFVHDSDKRSHLMDLLH 394 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 + +A+ ++F TK D+LE + G Sbjct 395 AQRENGNQGKQAL-------------------TLVFVETKKGADSLENWLCING------ 429 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 F +HGDR ER+ L FK G L+ TDVAARG+DI V +V+N LP++ Sbjct 430 ---FPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDI 486 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 +YVHRIGR GRA GLA + + + + Sbjct 487 DDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEV 531 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+E+ + + ++ ++ PT +Q +IP++ G D++ A+TGSGKT AF P+ Sbjct 145 VNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPI 204 Query 61 IQIVYETLKDQQE-GKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 I + + ++ G +G + S + +D F+ Sbjct 205 ISGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFS 248 >sp|Q7RY59|RRP3_NEUCR ATP-dependent rRNA helicase rrp-3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rrp-3 PE=3 SV=1 Length=515 Score = 313 bits (801), Expect = 4e-97, Method: Composition-based stats. Identities = 112/503 (22%), Positives = 182/503 (36%), Gaps = 82/503 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K KDLG+ + + ++ + + +++ G Sbjct 90 KTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLAL--------QNRDIIGIAETGSGKT 141 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P AL++ P+RELA Q + I LR LI+GG Sbjct 142 AAFALPI---LQALLDKPAPLFALVLAPTRELAAQIAQAFEALGSLIS---LRCALILGG 195 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L ++V TPGRL D + T +L +++LV+DEAD LL + + Sbjct 196 MDMVTQAIALGKKPHVIVATPGRLLDHLEKTKGFSLRSMQYLVMDEADRLLDMDFGPILE 255 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHV 444 ++ +P + + + SAT+ S V+ L + P V + + T+ Sbjct 256 KILKFLP------RERRTFLFSATM-SSKVESLQRASLRDPLKVSVSSNKYATVSTLKSN 308 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + + K Y V E Sbjct 309 YVFIP----------------------------------------HMHKDTYLVYLCNEF 328 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 IIF RT ++ + G G + LHG R L +F+ G Sbjct 329 AGQTIIIFTRTVLETQRIAILLRTLGMG---------AIPLHGGLSQSARLGALNKFRAG 379 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V VIN LP + + YVHR+GR RA + G AIS+V Sbjct 380 SREILVATDVAARGLDIPNVDCVINHDLPQDSKTYVHRVGRTARAGKSGHAISIVTQYDL 439 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 ++W + ++ G L++D + E + H + + + Sbjct 440 EIWLRIEAALGHKLDEYPLEKDEVMVF----KPRVEEAQRHARNEMKSL-----MENQGK 490 Query 685 DGKVTYGQKRAAGGGSYKGHVDI 707 G + +KR G G + H+D Sbjct 491 HGGLLK-RKRGNGQGGGRDHMDA 512 Score = 103 bits (257), Expect = 7e-22, Method: Composition-based stats. Identities = 26/67 (39%), Positives = 43/67 (64%), Gaps = 0/67 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++G++ + +A E + + PT IQ +SIPL L D++ AETGSGKT AF++P++ Sbjct 90 KTFKDLGIVDALCEACERLGYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFALPIL 149 Query 62 QIVYETL 68 Q + + Sbjct 150 QALLDKP 156 >sp|Q6BQ61|RRP3_DEBHA ATP-dependent rRNA helicase RRP3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=RRP3 PE=3 SV=2 Length=477 Score = 312 bits (798), Expect = 4e-97, Method: Composition-based stats. Identities = 105/479 (22%), Positives = 173/479 (36%), Gaps = 73/479 (15%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 K+ +L L E+ ++ +++ + + L++ G Sbjct 64 FKSFNELKLIPELLEAIQQMKFTKPTPIQSEAIPHAL--------EGKDIIGLAQTGSGK 115 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + A L++ P+RELA Q + LR + I+G Sbjct 116 TAAFAIPI---LQALWEAQAAYYGLVLAPTRELAYQIKETFDALG---SSMGLRSVCIVG 169 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ DQ L I+V TPGR+ D + T +L +++LV+DEAD LL + + Sbjct 170 GMDMMDQARDLMRKPHILVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPAL 229 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 +++ IP + + SAT+ + + KL +H P V + + D + Sbjct 230 DKILKIIPT------QRTTYLFSATMTN-KIAKLQRASLHNPVRVAVSNKYQTADNLVQS 282 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 ++ V+ K Y + + E Sbjct 283 MMLVS----------------------------------------DGYKNTYLIHLLNEF 302 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 IIF RT Q + FS V LHG +R +L +FK G Sbjct 303 LGKSIIIFTRTCAH---------SQRTALLARILGFSAVPLHGQLTQAQRLGSLNKFKAG 353 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 LI TDVAARG+DI V VIN +P + + Y+HR+GR RA + G +ISL+ Sbjct 354 KANILIATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRTARAGKSGKSISLITQYDL 413 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 +++ + S GK + + S E + T E + Sbjct 414 EMYLRIESVLGKKLPKDPSPSKAVLDTLHVHVDRAS--AEAIRQTKDFHEKRNPKKNRD 470 Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 54/106 (51%), Gaps = 9/106 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F+E+ ++PE+ +A+++M + PT IQ+E+IP L G D++ A+TGSGKT AF+IP++ Sbjct 65 KSFNELKLIPELLEAIQQMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPIL 124 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 Q ++E + + + A Sbjct 125 QALWEAQ---------AAYYGLVLAPTRELAYQIKETFDALGSSMG 161 >sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=RRP3 PE=3 SV=1 Length=493 Score = 312 bits (799), Expect = 5e-97, Method: Composition-based stats. Identities = 109/485 (22%), Positives = 183/485 (38%), Gaps = 79/485 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 L L E+ +N ++ + + + L++ G Sbjct 75 FAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSD--------VIGLAQTGSGKTAA 126 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + A ++ P+RELA+Q + +R I+GG+ Sbjct 127 FAIPI---LNKLWEDQQPYYACVLAPTRELAQQIKETFDSLGSLMG---VRTTCIVGGMN 180 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 DQ L I++ TPGRL D + +T +L ++FLV+DEAD LL + ++R+ Sbjct 181 MMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLKNLKFLVMDEADRLLDMEFGPVLDRI 240 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 IP K + SAT+ S + KL + P + + DT+ ++ Sbjct 241 LKIIP-----TKGRTTYLFSATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMV 294 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V LK + + + E Sbjct 295 VP----------------------------------------GGLKNTFLIYLLNEFIGK 314 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 IIF RTK + + L +FS LHGD ++R L+ FK G Sbjct 315 TVIIFTRTKANAERLSGL---------CNLLEFSATALHGDLNQNQRTGALDLFKAGKRS 365 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI V VIN +P + ++Y+HR+GR RA R G +ISLV+ ++ Sbjct 366 ILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELI 425 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + GK + ++ T+ + + E+ +E + + + GK Sbjct 426 LRIEEVLGKKLPKESVDKNIILTLRDSVDKANGEVV---------MEMNRRNKEKQARGK 476 Query 688 VTYGQ 692 G+ Sbjct 477 GRRGR 481 Score = 107 bits (267), Expect = 3e-23, Method: Composition-based stats. Identities = 31/71 (44%), Positives = 50/71 (70%), Gaps = 3/71 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+++ ++PE+ QA + +++ PT IQA +IP L G DV+ A+TGSGKT AF+IP++ Sbjct 74 SFAQLNLVPELIQACQNLNFTKPTPIQARAIPPALAGSDVIGLAQTGSGKTAAFAIPILN 133 Query 63 IVYETLKDQQE 73 ++E DQQ Sbjct 134 KLWE---DQQP 141 >sp|A7TS37|RRP3_VANPO ATP-dependent rRNA helicase RRP3 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=RRP3 PE=3 SV=1 Length=506 Score = 312 bits (800), Expect = 6e-97, Method: Composition-based stats. Identities = 109/458 (24%), Positives = 178/458 (39%), Gaps = 70/458 (15%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 DL L E+ KN ++ + + L++ G Sbjct 90 DLDLVPELIEACKNLNFAKPTPIQARSIPPAL--------QGHDIIGLAQTGSGKTAAFA 141 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + A I+ P+RELA+Q + +R I+GG+ Sbjct 142 IPI---LNRLWHDQQPYYACILAPTRELAQQIKETFDSLGSLMG---VRSACIVGGMNMM 195 Query 331 DQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 DQ L I++ TPGRL D + +T +L +++FLV+DEAD LL + ++R+ Sbjct 196 DQARDLMRKPHIIIATPGRLMDHLENTRGFSLRKLKFLVMDEADRLLDMEFGPVLDRILK 255 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 IP + + SAT+ S + KL + P + + DT+ ++ V Sbjct 256 IIP-----TQGRTTYLFSATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVVP 309 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 LK Y + + E Sbjct 310 ----------------------------------------GGLKNTYLIYLMNEFIGKTI 329 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 I+F RTK + + + +FS LHGD ++R +L+ FK G L Sbjct 330 IVFTRTKANAERITTL---------ANLLEFSATALHGDLNQNQRTGSLDLFKAGRRSIL 380 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TDVAARG+DI V VIN +P + ++Y+HR+GR RA R G +ISLV+ ++ Sbjct 381 VATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILR 440 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 + GK + +D T+ + + E+ LN Sbjct 441 IEDVLGKKLPKENVNKDAILTLRDSVDKANGEVVMELN 478 Score = 108 bits (270), Expect = 2e-23, Method: Composition-based stats. Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 3/71 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ ++PE+ +A + +++ PT IQA SIP L G D++ A+TGSGKT AF+IP++ Sbjct 87 SFSDLDLVPELIEACKNLNFAKPTPIQARSIPPALQGHDIIGLAQTGSGKTAAFAIPILN 146 Query 63 IVYETLKDQQE 73 ++ DQQ Sbjct 147 RLWH---DQQP 154 >sp|A6R3L3|DED1_AJECN ATP-dependent RNA helicase DED1 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DED1 PE=3 SV=1 Length=694 Score = 318 bits (814), Expect = 6e-97, Method: Composition-based stats. Identities = 96/360 (27%), Positives = 158/360 (44%), Gaps = 58/360 (16%) Query 265 YIVKSQHSGNAQVTQTKFLPNA----PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + +S H+ + + L P ALI+ P+REL Q + + K+ L Sbjct 261 ILSQSLHTRGPEAEAARGLGRQQKAYPTALILGPTRELVSQIYDEAR---KFCYRTALHP 317 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 ++ GG +QL L+ G +++V TPGRL D++ G+++L+ +++LVLDEAD +L G+ Sbjct 318 RVVYGGAEMGNQLRQLDQGCNVLVATPGRLVDMMERGRISLAHIQYLVLDEADRMLDMGF 377 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I R+ D Q ++ SAT D++KL+E+ + ++ + S + Sbjct 378 EPQIRRIVQG--SDMPDKHMRQTLMFSATFPP-DIQKLAEEFLKDHIFLSVGRVGSTSEN 434 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + +V D K + Sbjct 435 ITQRIVECESDKD---------------------------------------KDSALLDI 455 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + ++F TK D L + + H+ +HGDR ER++ LE Sbjct 456 LCSDSTGLTLVFVETKRQADMLSDFLLD---------HRLPATAIHGDRTQRERERALEL 506 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G L+ T VAARG+DI V +VIN LP+E +YVHRIGR GRA G++ + + Sbjct 507 FRTGRCPILVATAVAARGLDIPNVTHVINYDLPNEIDDYVHRIGRTGRAGNTGISTAFFS 566 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 46/108 (43%), Gaps = 6/108 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + + + + +PT +Q SIP+++GG D++ A+TGSGKTG F P+ Sbjct 202 ITAFTNPPLHEHLLSNIVLARYTVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPI 261 Query 61 IQIVYETLKDQQEGKKGKT------TIKTGASVLNKWQMNPYDRGSAF 102 + T + E +G + YD F Sbjct 262 LSQSLHTRGPEAEAARGLGRQQKAYPTALILGPTRELVSQIYDEARKF 309 >sp|Q6Z4K6|RH52B_ORYSJ DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa subsp. japonica OX=39947 GN=PL10B PE=2 SV=1 Length=638 Score = 316 bits (810), Expect = 7e-97, Method: Composition-based stats. Identities = 100/402 (25%), Positives = 163/402 (41%), Gaps = 55/402 (14%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA-------PKALIVEPSRELA 299 +A ++ G + + +++ P + P ALI+ P+REL+ Sbjct 201 PISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRELS 260 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL 359 Q ++F ++ ++ GG QL LE GV+I+V TPGRL DL+ ++ Sbjct 261 VQIHEEARKFA---YQTGVKVVVAYGGAPITQQLRELERGVEILVATPGRLMDLLERARV 317 Query 360 NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 +L +++L LDEAD +L G+ I ++ Q+ Q ++ SAT ++++++ Sbjct 318 SLQMIKYLALDEADRMLDMGFEPQIRKIVEQMD--MPPRGERQTMLFSATFPK-EIQRMA 374 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 + ++ + S D + V V R + R + H K Sbjct 375 SDFLADYIFLAVGRVGSSTDLIVQRVEFVLDADKRSYLMDLLHAQRANGTHGKQAL---- 430 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 ++F TK D LE + G Sbjct 431 -----------------------------TLVFVETKRGADALENWLYNNG--------- 452 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 F +HGDR ER+ L FK G L+ TDVAARG+DI V +VIN LP++ +Y Sbjct 453 FPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDY 512 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VHRIGR GRA + GLA + + + + Sbjct 513 VHRIGRTGRAGKSGLATAFFNESNTPLARPLSELMQEANQEV 554 Score = 105 bits (262), Expect = 3e-22, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 5/104 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F+E+ + + + + ++ PT +Q +IP+ + G D++ A+TGSGKT AF P+I Sbjct 170 TFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIIS 229 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLN---KWQMNPYDRGSAFA 103 + + + +G T A +L+ + + ++ FA Sbjct 230 GIMRSRPPPRS--RGSRTAYPLALILSPTRELSVQIHEEARKFA 271 >sp|Q6BU54|DED1_DEBHA ATP-dependent RNA helicase DED1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DED1 PE=3 SV=1 Length=630 Score = 315 bits (808), Expect = 1e-96, Method: Composition-based stats. Identities = 92/354 (26%), Positives = 153/354 (43%), Gaps = 55/354 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q + K+F +R ++ GG Q+ LE G D++V T Sbjct 240 PTALVMAPTRELVSQIFDEAKKFA---YRSWVRPSVVYGGADIGGQIRNLERGCDLLVAT 296 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++L+ +++LVLDEAD +L G+ I + + + Q ++ Sbjct 297 PGRLKDLLERGRVSLASIKYLVLDEADRMLDMGFEPQIRHIVQECD--MPGVEDRQTLMF 354 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT +++ L+ + ++ + S + + ++ V + Sbjct 355 SATFPK-EIQFLARDFLKEYIFLSVGRVGSTSENITQKILYVEDEE-------------- 399 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + + + IIF TK DNL + Sbjct 400 --------------------------KKSVLLDLLSANDNGLTIIFTETKRMADNLADFL 433 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 QG F +HGDR +ER++ L FK G L+ T VAARG+DI V + Sbjct 434 YDQG---------FPATAIHGDRSQYEREKALAAFKTGTAPILVATAVAARGLDIPNVSH 484 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 ++N LP + +YVHRIGR GRA +G+A + + + + + Sbjct 485 IVNYDLPSDIDDYVHRIGRTGRAGNIGIATAFFNRNNKNIVKGLVDLLTEANQE 538 Score = 93.3 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 29/112 (26%), Positives = 49/112 (44%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + P + + V+ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 155 ITAFTAPPLDPLLVENVKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 214 Query 61 IQIVYETLKDQQEGKKGKTT---IKTGAS---VLNKWQMNPYDRGSAFAIGS 106 + Y + G + + A + +D FA S Sbjct 215 LSESYMNGPAEVPETAGAFSSHKVYPTALVMAPTRELVSQIFDEAKKFAYRS 266 >sp|P25888|RHLE_ECOLI ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12) OX=83333 GN=rhlE PE=1 SV=3 Length=454 Score = 310 bits (793), Expect = 1e-96, Method: Composition-based stats. Identities = 124/439 (28%), Positives = 194/439 (44%), Gaps = 78/439 (18%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + F LGL+ +I + Q ++ + +A ++ Sbjct 1 MSFDS----LGLSPDILRAVAEQGYREPTPIQQQAIPAVL--------EGRDLMASAQTG 48 Query 263 DGYIVKS-----QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 G QH Q P +ALI+ P+RELA Q N++ + KY++ Sbjct 49 TGKTAGFTLPLLQHLITRQPHAKGRRP--VRALILTPTRELAAQIGENVRDYSKYLN--- 103 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 +R L++ GGV+ Q+ L GVD++V TPGRL DL + L QV LVLDEAD +L Sbjct 104 IRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLD 163 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 G+ I R+ ++P + Q ++ SAT S D+K L+EK++H P +++ ++ Sbjct 164 MGFIHDIRRVLTKLPA------KRQNLLFSATF-SDDIKALAEKLLHNPLEIEVARRNTA 216 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 D V V V+ K R E Sbjct 217 SDQVTQHVHFVDKKRKR----------------------------------------ELL 236 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 I + Q ++F RTK ++L + + G +HG++ R + Sbjct 237 SHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDG---------IRSAAIHGNKSQGARTRA 287 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 L FK GD+R L+ TD+AARG+DI +P+V+N LP+ ++YVHRIGR GRA G A+S Sbjct 288 LADFKSGDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALS 347 Query 618 LVATEKEKVWYHVCSSRGK 636 LV ++ K+ + K Sbjct 348 LVCVDEHKLLRDIEKLLKK 366 Score = 111 bits (278), Expect = 1e-24, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 5/103 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +G+ P+I +AV E + PT IQ ++IP +L G D++ +A+TG+GKT F++P++Q Sbjct 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61 Query 63 IVYETLKDQQEGKKGKTTIKTGAS-VLNKWQMNPYDRGSAFAI 104 + +Q KG+ ++ + + ++ Sbjct 62 HLI----TRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK 100 >sp|A6RW56|RRP3_BOTFB ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=rrp3 PE=3 SV=1 Length=486 Score = 310 bits (795), Expect = 1e-96, Method: Composition-based stats. Identities = 106/502 (21%), Positives = 189/502 (38%), Gaps = 81/502 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ KDLG+ + ++ + + L++ G Sbjct 60 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLAL--------QGRDLIGLAETGSGKT 111 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P L++ P+RELA Q + I +++ +I+GG Sbjct 112 AAFALPI---LQALLDKPQPLFGLVLAPTRELAYQISQQFEALGSVI---RVKCAVIVGG 165 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L I+V TPGRL D + +T +L +++LV+DEAD LL + ++ Sbjct 166 MDMVPQSIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILD 225 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ +P + + + SAT+ S V+ L + P V + Sbjct 226 KILKVLP------RERRTYLFSATI-SSKVESLQRASLKDPLRVSI-------------- 264 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + L +++I +H K Y + + E Sbjct 265 ---SSNKYQTVSTLIQNYIFIPLIH----------------------KDTYLIYLLNEFA 299 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 AIIF RT + + G F + LHG R L +F+ G Sbjct 300 GQSAIIFTRTVNETQRIAILLRTLG---------FGAIPLHGQLSQSSRLGALNKFRAGS 350 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TDVAARG+DI V V+N +P + + Y+HR+GR RA + G AIS+V + Sbjct 351 REILVATDVAARGLDIPSVDVVLNYDVPQDSKTYIHRVGRTARAGKSGHAISVVTQYDLE 410 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 ++ + ++ GK +++ + E + H + + D Sbjct 411 IFMRIEAALGKK----QVEYPTVKDEVMVFKPRVEEAQRHARNEMKNLHED-----RGKK 461 Query 686 GKVTYGQKRAAGGGSYKGHVDI 707 G V G++ A G + +G ++ Sbjct 462 GAVLKGRRPANG--AKRGRDEM 481 Score = 107 bits (266), Expect = 4e-23, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 51/103 (50%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G++ + +A + + + PT IQ ESIPL L G D++ AETGSGKT AF++P++ Sbjct 60 KSFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPIL 119 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + + K + + + + A Sbjct 120 QALLD---------KPQPLFGLVLAPTRELAYQISQQFEALGS 153 >sp|Q9SQV1|RH40_ARATH DEAD-box ATP-dependent RNA helicase 40 OS=Arabidopsis thaliana OX=3702 GN=RH40 PE=2 SV=1 Length=1088 Score = 325 bits (834), Expect = 2e-96, Method: Composition-based stats. Identities = 118/453 (26%), Positives = 181/453 (40%), Gaps = 78/453 (17%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEE 246 H+ +I ++ F + GL EI + + ++ Sbjct 419 KQHEVTTTGENIPAPYITF----ESSGLPPEILRELLSAGFPSPTPIQAQTWPIAL---- 470 Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 VA++K G + + + N P LI+ P+RELA Q + Sbjct 471 ----QSRDIVAIAKTGSGKTLGYLIPAFILLRHCRNDSRNGPTVLILAPTRELATQIQDE 526 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 +F + + ++ + GG QL LE G DIVV TPGRL+D++ ++ QV Sbjct 527 ALRFGR---SSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVS 583 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 LVLDEAD +L G+ I ++ N+IP R Q ++ +AT +V+K++ ++ Sbjct 584 LLVLDEADRMLDMGFEPQIRKIVNEIP------PRRQTLMYTATWPK-EVRKIASDLLVN 636 Query 426 PTWVDLKGEDS--VPDTVHHV--VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 P V++ D + VVP K RL + L Sbjct 637 PVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILR--------------------- 675 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + + + IIFC TK CD+L + G F Sbjct 676 --------------------SQERGSKVIIFCSTKRLCDHLAR----------SVGRHFG 705 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 V +HGD+ ER L +F+ G LI TDVAARG+DI + VIN P ++YVH Sbjct 706 AVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVH 765 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 RIGR GRA G+A + + K + Sbjct 766 RIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVL 798 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 27/104 (26%), Positives = 43/104 (41%), Gaps = 5/104 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F G+ PEI + + + PT IQA++ P+ L D++ A+TGSGKT + IP Sbjct 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 ++ D + G + + D F S Sbjct 496 LLRHCRNDSRNG-----PTVLILAPTRELATQIQDEALRFGRSS 534 >sp|O13370|DED1_SCHPO ATP-dependent RNA helicase ded1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ded1 PE=1 SV=1 Length=636 Score = 315 bits (807), Expect = 2e-96, Method: Composition-based stats. Identities = 91/361 (25%), Positives = 148/361 (41%), Gaps = 56/361 (16%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 + P LI+ P+REL Q + K+ +R + GG R Q+ ++ G Sbjct 250 RPRKAYPTTLILAPTRELVCQIHEESR---KFCYRSWVRPCAVYGGADIRAQIRQIDQGC 306 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 D++ TPGRL DL+ G+++L+ ++FLVLDEAD +L G+ I + + + Sbjct 307 DLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEG--ADMTSVEE 364 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 Q ++ SAT D++ L+ + ++ + S + + VV V R Sbjct 365 RQTLMFSATFP-RDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKR------ 417 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD-QAIIFCRTKIDC 519 Y + + + +IF TK Sbjct 418 ----------------------------------SYLLDILHTLPPEGLTLIFVETKRMA 443 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L Y + F +HGDR ER++ LE F+ G ++ T VA+RG+ Sbjct 444 DTLTDYLLN---------SNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGL 494 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 DI V +VIN LP + +YVHRIGR GRA G A++ + + + + Sbjct 495 DIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQ 554 Query 640 N 640 Sbjct 555 E 555 Score = 94.8 bits (234), Expect = 7e-19, Method: Composition-based stats. Identities = 23/111 (21%), Positives = 47/111 (42%), Gaps = 9/111 (8%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + Q ++ + PT +Q SIP++ G D++ A+TGSGKT F P+ Sbjct 168 VNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPI 227 Query 61 IQIVYETLK-------DQQEGKKGKTTIKT--GASVLNKWQMNPYDRGSAF 102 + + ++ D G + + T + + ++ F Sbjct 228 LSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKF 278 >sp|Q75HJ0|RH37_ORYSJ DEAD-box ATP-dependent RNA helicase 37 OS=Oryza sativa subsp. japonica OX=39947 GN=PL10A PE=2 SV=1 Length=637 Score = 315 bits (806), Expect = 3e-96, Method: Composition-based stats. Identities = 102/403 (25%), Positives = 163/403 (40%), Gaps = 57/403 (14%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK--------ALIVEPSREL 298 +A ++ G + + ++ P P+ ALI+ P+REL Sbjct 206 PISIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRP-PQRPRGSRTAYPLALILSPTREL 264 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK 358 + Q ++F +R ++ GG QL LE GV+I+V TPGRL DL+ + Sbjct 265 SVQIHEEARKFA---YQTGVRVVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLERAR 321 Query 359 LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKL 418 ++L V++L LDEAD +L G+ I ++ Q+ Q ++ SAT +++++ Sbjct 322 VSLQMVKYLALDEADRMLDMGFEPQIRKIVEQMD--MPPRGVRQTMLFSATFPK-EIQRM 378 Query 419 SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 + + ++ + S D + V V R + + + H K Sbjct 379 ASDFLADYIFLAVGRVGSSTDLIAQRVEFVLEADKRSYLMDLLHAQKANGTHGKQAL--- 435 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 ++F TK D LE + G Sbjct 436 ------------------------------TLVFVETKRGADALENWLYTNG-------- 457 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 F +HGDR ER+ L FK G L+ TDVAARG+DI V +VIN LP++ + Sbjct 458 -FPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDD 516 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 YVHRIGR GRA + GLA + + +C + Sbjct 517 YVHRIGRTGRAGKSGLATAFFNEGNLSLARPLCELMQEANQEV 559 Score = 108 bits (269), Expect = 5e-23, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 54/106 (51%), Gaps = 5/106 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+E+ + + + + ++ PT +Q +IP+ + G D++ A+TGSGKT AF P+ Sbjct 173 VNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPI 232 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLN---KWQMNPYDRGSAFA 103 I + + Q+ +G T A +L+ + + ++ FA Sbjct 233 ISGIMSSRPPQRP--RGSRTAYPLALILSPTRELSVQIHEEARKFA 276 >sp|Q6BJX6|DHH1_DEBHA ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DHH1 PE=3 SV=2 Length=516 Score = 310 bits (795), Expect = 3e-96, Method: Composition-based stats. Identities = 114/514 (22%), Positives = 196/514 (38%), Gaps = 91/514 (18%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K +D L E+ + ++ + G L++A +G Sbjct 30 KTFEDFPLKRELLMGIFEAGFEKPSPVQEESIPMAL----------AGRDILARAKNG-T 78 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 K+ + Q + N +ALI+ P+RELA QT ++ K++ L+ ++ GG Sbjct 79 GKTASFVIPCLQQARPKVNKIQALILVPTRELALQTSQVVRTLGKHLG---LQCMVTTGG 135 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + RD + L + V ++VGTPGR+ DL S +LS+ V+DEAD +LS+ + I + Sbjct 136 TSLRDDILRLNDPVHVLVGTPGRVLDLASRKVADLSECPLFVMDEADKMLSREFKGIIEQ 195 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + P Q ++ SAT VK ++ + P ++L ++ + Sbjct 196 ILAFFPTT------RQSLLFSATFP-LAVKSFMDQHLTKPYEINLM-DELTLRGISQFYA 247 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 V K K + ++ Sbjct 248 FVEEKQ----------------------------------------KLHCLNTLFSKLQI 267 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +QAIIFC + + L + + G +SC H H R + F++G V Sbjct 268 NQAIIFCNSTNRVELLAKKITELG---------YSCYYSHAKMPQHARNKVFHEFRQGKV 318 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L++ Sbjct 319 RVLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYN 378 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDG 686 Y + G + + I++ L ++ +D+ Sbjct 379 LYKIEQELGT-----------------EIKPIPATIDKSLYVAENEAAVPRPFKIDQLPK 421 Query 687 KVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 K++ G YKG + ++ V + Sbjct 422 GNETVHKKS--GYEYKGQPE-VSSNVAGMPQQVP 452 Score = 98.3 bits (243), Expect = 4e-20, Method: Composition-based stats. Identities = 23/93 (25%), Positives = 39/93 (42%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ + E + P+ +Q ESIP+ L G D+L A+ G+GKT +F IP + Sbjct 30 KTFEDFPLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCL 89 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 Q + Q + + Sbjct 90 QQARPKVNKIQ---------ALILVPTRELALQ 113 >sp|Q84W89|RH37_ARATH DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana OX=3702 GN=RH37 PE=2 SV=2 Length=633 Score = 314 bits (804), Expect = 4e-96, Method: Composition-based stats. Identities = 103/402 (26%), Positives = 168/402 (42%), Gaps = 55/402 (14%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA-------PKALIVEPSRELA 299 +A ++ G + + + + + P A+I+ P+RELA Sbjct 191 PILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELA 250 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL 359 Q + K+F ++ ++ GG QL LE GVDI+V TPGRL+DL+ ++ Sbjct 251 SQIHDEAKKFS---YQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARV 307 Query 360 NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 ++ +RFL LDEAD +L G+ I ++ Q+ Q ++ SAT ++++L+ Sbjct 308 SMQMIRFLALDEADRMLDMGFEPQIRKIVEQMD--MPPRGVRQTLLFSATFP-REIQRLA 364 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 + ++ + S D + V V R SH+ ++N G Sbjct 365 ADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKR-------SHLMDLLHAQRENGIQGK 417 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 + ++F TK D+LE + G Sbjct 418 QAL--------------------------TLVFVETKRGADSLENWLCING--------- 442 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 F +HGDR ER+ L+ FK G L+ TDVAARG+DI V +V+N LP++ +Y Sbjct 443 FPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDY 502 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VHRIGR GRA + GLA + + + + Sbjct 503 VHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEANQEV 544 Score = 108 bits (269), Expect = 5e-23, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 5/106 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+E+ + + + ++ PT +Q +IP++L G D++ A+TGSGKT AF P+ Sbjct 158 VNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPI 217 Query 61 IQIVYETLKDQQEGKKGKTTIKTGA---SVLNKWQMNPYDRGSAFA 103 I + + Q+ +G T+ A S + +D F+ Sbjct 218 ISGIMKDQHVQRP--RGSRTVYPLAVILSPTRELASQIHDEAKKFS 261 >sp|Q0CIQ3|RRP3_ASPTN ATP-dependent rRNA helicase rrp3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rrp3 PE=3 SV=2 Length=445 Score = 308 bits (788), Expect = 5e-96, Method: Composition-based stats. Identities = 96/401 (24%), Positives = 159/401 (40%), Gaps = 64/401 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 + L++ G + P +LI+ P+RELA+Q + + Sbjct 60 PIALEGRDLIGLAETGSGKTAAFVL---PMLQALMDKPQQFHSLILAPTRELAQQIAHTV 116 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVR 365 + I +R L+IGG+ Q L ++V TPGRL D + +T +L ++ Sbjct 117 EALGARIS---VRCTLLIGGMDMISQAIALGKKPHVIVATPGRLLDHLENTKGFSLRTLK 173 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 +LVLDEAD LL + ++++ +P+ + + SAT+ S V+ L + Sbjct 174 YLVLDEADRLLDLDFGPILDKLLRLLPK-------RKTYLFSATM-SSKVESLQRASLSD 225 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P V + ++ + + + K Sbjct 226 PVRVSVSTKNQTASKLLQSYLFIPHK---------------------------------- 251 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 K Y V + E IIF RT + L G F + + Sbjct 252 ------FKDFYLVYLLNERAGQMGIIFTRTVHETQRLSIMLRNLG---------FPAIPI 296 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG R +L +F+ LI TDVAARG+DI V YV+N LP + + Y+HR+GR Sbjct 297 HGQLSQSARLASLNKFRARSRNLLIATDVAARGLDIPAVDYVLNYDLPQDSKTYIHRVGR 356 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 RA + G+A S V + ++W + + GK + ++D Sbjct 357 TARAGKSGIAFSFVTQYEVELWLRIEDALGKKVEEYKPEKD 397 Score = 103 bits (256), Expect = 5e-22, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 2/130 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E+GV+ + +A EE+ + PT IQ IP+ L G D++ AETGSGKT AF +P++ Sbjct 28 KTFRELGVIDSLCEACEELGYTAPTPIQERCIPIALEGRDLIGLAETGSGKTAAFVLPML 87 Query 62 QIVYETLKDQQEGKKGKTT--IKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW 119 Q + + + T + A + R + G D + K+ Sbjct 88 QALMDKPQQFHSLILAPTRELAQQIAHTVEALGARISVRCTLLIGGMDMISQAIALGKKP 147 Query 120 HGCRATKGLM 129 H AT G + Sbjct 148 HVIVATPGRL 157 >sp|Q0UU86|IF4A_PHANO ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=TIF1 PE=3 SV=1 Length=396 Score = 305 bits (782), Expect = 7e-96, Method: Composition-based stats. Identities = 114/426 (27%), Positives = 188/426 (44%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F A LK L+ + +G E + + + K D +G + + + Sbjct 25 FDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQK 84 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 A +ALI+ P+RELA+Q + ++D + IGG + RD + L++G Sbjct 85 IDSNVKACQALILAPTRELAQQIQKVVVAIGDFMD---VACHACIGGTSVRDDMKALQDG 141 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VVGTPGR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T Sbjct 142 PQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST---- 197 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 198 --QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEDWKL---- 250 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 251 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 275 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD +R ++ F+ G R LI TD+ ARGI Sbjct 276 DWLTDKLT---------ARDFTVSAMHGDMDQAQRDVIMKEFRSGSSRVLIATDLLARGI 326 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 327 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 381 Query 640 NTRLKE 645 +T+++E Sbjct 382 STQIEE 387 Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats. Identities = 23/77 (30%), Positives = 39/77 (51%), Gaps = 0/77 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + E+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI +Q Sbjct 24 SFDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQ 83 Query 63 IVYETLKDQQEGKKGKT 79 + +K Q T Sbjct 84 KIDSNVKACQALILAPT 100 >sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=RRP3 PE=3 SV=1 Length=501 Score = 309 bits (791), Expect = 1e-95, Method: Composition-based stats. Identities = 110/442 (25%), Positives = 175/442 (40%), Gaps = 68/442 (15%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIV---KSQHSGNAQVTQTKFL-----PNAP 287 EL + P A+ A +G+ + SG L P Sbjct 90 PELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEP 149 Query 288 K-ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 A I+ P+RELA+Q + +R I+GG+ DQ L I++ T Sbjct 150 YYACILAPTRELAQQIKETFDSLGSLMG---VRSTCIVGGMNMMDQARDLMRKPHIIIAT 206 Query 347 PGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 PGRL D + +T +L +++FLV+DEAD LL + ++R+ IP + + Sbjct 207 PGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIP-----TQERTTYL 261 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ S + KL + P + + DT+ ++ V Sbjct 262 FSATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVP---------------- 304 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 LK Y + + E IIF RTK + + L Sbjct 305 ------------------------GGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGL 340 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +FS LHGD ++R L+ FK G L+ TDVAARG+DI V Sbjct 341 ---------CNLLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVD 391 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 V+N +P + ++Y+HR+GR RA R G +ISLV+ ++ + GK + + Sbjct 392 IVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDK 451 Query 646 DGGCTIWYNEMQLLSEIEEHLN 667 + T+ + + E+ +N Sbjct 452 NIILTLRDSVDKANGEVVMEMN 473 Score = 108 bits (269), Expect = 2e-23, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FSE+ ++PE+ QA + +++ PT IQ+++IP L G D++ A+TGSGKT AF+IP++ Sbjct 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILN 141 Query 63 IVYE 66 ++ Sbjct 142 RLWH 145 >sp|A3LWX3|DHH1_PICST ATP-dependent RNA helicase DHH1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DHH1 PE=3 SV=1 Length=509 Score = 309 bits (791), Expect = 1e-95, Method: Composition-based stats. Identities = 111/501 (22%), Positives = 193/501 (39%), Gaps = 90/501 (18%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ +D L E+ + ++ + G L++A +G Sbjct 30 KSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMAL----------AGRDVLARAKNG-T 78 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 K+ + Q K N +ALI+ P+RELA QT ++ K++ ++ ++ GG Sbjct 79 GKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHLG---IQCMVTTGG 135 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + +D + L + V ++VGTPGR+ DL + +LS+ V+DEAD +LS+ + I + Sbjct 136 TSLKDDILRLNDPVHVLVGTPGRVLDLAARSVADLSECPLFVMDEADKMLSREFKGIIEQ 195 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + P K Q ++ SAT VK +K ++ P ++L ++ + Sbjct 196 ILEFFP------KNRQSLLFSATFP-LAVKSFMDKHLNKPYEINLM-DELTLRGITQYYA 247 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 V K K + ++ Sbjct 248 FVEEKQ----------------------------------------KLHCLNTLFSKLQI 267 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +Q+IIFC + + L + + G +SC H R + F++G V Sbjct 268 NQSIIFCNSTNRVELLAKKITELG---------YSCYYSHAKMPQQARNKVFHEFRQGKV 318 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L++ Sbjct 319 RNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYS 378 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDG 686 Y + G + + I+ L ++ +++ Sbjct 379 LYKIEQELGT-----------------EIKPIPATIDRKLYVADNEDAIPKPFKIEQLPK 421 Query 687 KVTYGQKRAAGGGSYKGHVDI 707 RA G YKG ++ Sbjct 422 GNEKVHTRA--GYEYKGQPEV 440 Score = 102 bits (254), Expect = 2e-21, Method: Composition-based stats. Identities = 26/93 (28%), Positives = 41/93 (44%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F + + E+ + E + P+ IQ ESIP+ L G DVL A+ G+GKT +F IP + Sbjct 30 KSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDVLARAKNGTGKTASFIIPSL 89 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 Q + L Q + + Sbjct 90 QQIKPKLNKIQ---------ALILVPTRELALQ 113 >sp|Q75EW9|RRP3_EREGS ATP-dependent rRNA helicase RRP3 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=RRP3 PE=3 SV=2 Length=486 Score = 308 bits (789), Expect = 1e-95, Method: Composition-based stats. Identities = 105/463 (23%), Positives = 174/463 (38%), Gaps = 76/463 (16%) Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL-----PNAPK-ALIVEP 294 N + + D + SG L P A I+ P Sbjct 83 NLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFAIPILNRLWHDQQPYYACILAP 142 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV 354 +RELA+Q + +R I+GG+ DQ L I++ TPGRL D + Sbjct 143 TRELAQQIKETFDSLGSLMG---VRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHL 199 Query 355 -STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 +T L +++FLV+DEAD LL + ++R+ IP K + SAT+ S Sbjct 200 ENTKGFALRKLQFLVMDEADRLLDMEFGPVLDRILKNIP-----TKGRTTYLFSATMTS- 253 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 + KL + P + + DT+ ++ V Sbjct 254 KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLIVVP------------------------ 289 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 LK + + + E I+F RTK + + + Sbjct 290 ----------------GGLKNTFLIYLLNEFIGKTTIVFTRTKANAERISGL-------- 325 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP 593 +FS LHGD ++R L+ FK G L+ TDVAARG+DI V VIN +P Sbjct 326 -CNLLEFSATALHGDLNQNQRTGALDLFKAGKKSILVATDVAARGLDIPSVDLVINYDIP 384 Query 594 DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + ++Y+HR+GR RA R G ++SLV+ ++ + GK + Sbjct 385 VDSKSYIHRVGRTARAGRSGKSVSLVSQYDLELILRIEEVLGKKLPKENV---------- 434 Query 654 NEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAA 696 + ++ + + ++ +V ++ E + + R A Sbjct 435 -DKSIVLSLRDSVDKANGEVIMELNRRNKEKQTRGKGRRSRTA 476 Score = 109 bits (271), Expect = 1e-23, Method: Composition-based stats. Identities = 28/72 (39%), Positives = 50/72 (69%), Gaps = 3/72 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F E+ ++PE+ +A + +++ PT IQ+++IP L G D++ A+TGSGKT AF+IP++ Sbjct 66 SSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFAIPIL 125 Query 62 QIVYETLKDQQE 73 ++ DQQ Sbjct 126 NRLWH---DQQP 134 >sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRP3 PE=1 SV=2 Length=501 Score = 308 bits (790), Expect = 2e-95, Method: Composition-based stats. Identities = 110/442 (25%), Positives = 176/442 (40%), Gaps = 68/442 (15%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIV---KSQHSGNAQVTQTKFL-----PNAP 287 EL + P A+ A +G+ + SG L P Sbjct 90 PELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEP 149 Query 288 K-ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 A I+ P+RELA+Q + +R I+GG+ DQ L I++ T Sbjct 150 YYACILAPTRELAQQIKETFDSLGSLMG---VRSTCIVGGMNMMDQARDLMRKPHIIIAT 206 Query 347 PGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 PGRL D + +T +L +++FLV+DEAD LL + ++R+ IP + + Sbjct 207 PGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIP-----TQERTTYL 261 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ S + KL + P + + DT+ ++ V Sbjct 262 FSATMTS-KIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVP---------------- 304 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 LK Y + + E IIF RTK + + L Sbjct 305 ------------------------GGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGL 340 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 +FS LHGD ++R +L+ FK G L+ TDVAARG+DI V Sbjct 341 ---------CNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVD 391 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 V+N +P + ++Y+HR+GR RA R G +ISLV+ ++ + GK + + Sbjct 392 IVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKKLPKESVDK 451 Query 646 DGGCTIWYNEMQLLSEIEEHLN 667 + T+ + + E+ +N Sbjct 452 NIILTLRDSVDKANGEVVMEMN 473 Score = 108 bits (269), Expect = 2e-23, Method: Composition-based stats. Identities = 27/64 (42%), Positives = 47/64 (73%), Gaps = 0/64 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FSE+ ++PE+ QA + +++ PT IQ+++IP L G D++ A+TGSGKT AF+IP++ Sbjct 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILN 141 Query 63 IVYE 66 ++ Sbjct 142 RLWH 145 >sp|Q2YUH3|CSHA_STAAB DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=cshA PE=3 SV=1 Length=506 Score = 308 bits (789), Expect = 2e-95, Method: Composition-based stats. Identities = 113/530 (21%), Positives = 208/530 (39%), Gaps = 92/530 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ +++ ++ + + + ++ G Sbjct 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL--------QGIDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + + ++LI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF---GIPLIEKVVWK-QGVQSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP V + Q ++ SAT+ ++ L ++ M P + + + Sbjct 168 MDKIPAV-----QRQTMLFSATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIN 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + G+ R H + E DIK V+ + K Sbjct 353 RQIEDANGRKMSALR--------------------PPHRKEVLQAREDDIKEKVENWMSK 392 Query 688 VTYGQKRAAGGGSYKGH--VDILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 + + + + VD++A +QEL E + L + Sbjct 393 ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRK 442 Score = 100 bits (248), Expect = 8e-21, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 51/105 (49%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V + + + M ++ F+ G Sbjct 61 IEKVVWK----------QGVQSLILAPTRELAMQVAEQLREFSRG 95 >sp|Q55804|CRHR_SYNY3 RNA helicase CrhR OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=crhR PE=1 SV=1 Length=492 Score = 307 bits (787), Expect = 2e-95, Method: Composition-based stats. Identities = 118/486 (24%), Positives = 204/486 (42%), Gaps = 82/486 (17%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 + DLGL+ + + + ++ + +A S+ G Sbjct 6 TSTFADLGLSEKRCQLLADIGFEAPTQIQTEAIPLLLS--------GRDMLAQSQTGTGK 57 Query 266 IVKSQHSGNAQVTQTKFLPNA-PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 A + P +ALI+ P+RELA+Q +K F +L L + Sbjct 58 TAAF-----ALPLMDRIDPEGDLQALILTPTRELAQQVAEAMKDFSH---ERRLFILNVY 109 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + Q+ LE GV IVVGTPGR+ DL+ KL L ++++VLDEAD +LS G+ D + Sbjct 110 GGQSIERQIRSLERGVQIVVGTPGRVIDLIDRKKLKLETIQWVVLDEADEMLSMGFIDDV 169 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + + P Q SAT+ ++K+L + ++ P V +K S P + Sbjct 170 KTILRKTP------PTRQTACFSATMP-REIKELVNQFLNDPALVTVKQTQSTPTRIEQQ 222 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + V P WS K + ++ Sbjct 223 LYHV---------------------------------PRGWS------KAKALQPILEME 243 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + AIIF RTK +L + G S HG+ +R++ + RF+ G Sbjct 244 DPESAIIFVRTKQTAADLTSRLQEAG---------HSVDEYHGNLSQSQRERLVHRFRDG 294 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 ++ ++ TD+AARG+D++ + +V+N LPD + Y+HRIGR GRA + G AI+LV Sbjct 295 KIKLVVATDIAARGLDVNNLSHVVNFDLPDNAETYIHRIGRTGRAGKTGKAIALVEPIDR 354 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE-----PDIKV 679 ++ + + + +++ E + + +++E L ++ P ++ Sbjct 355 RLLRSIENRLKQ-----QIEVCTIPNRSQVEAKRIEKLQEQLKEALTGERMASFLPLVRE 409 Query 680 PVDEFD 685 DE+D Sbjct 410 LSDEYD 415 Score = 93.3 bits (230), Expect = 1e-18, Method: Composition-based stats. Identities = 23/63 (37%), Positives = 44/63 (70%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+++G+ + Q + ++ + PT IQ E+IPL+L G D+L ++TG+GKT AF++P++ Sbjct 7 STFADLGLSEKRCQLLADIGFEAPTQIQTEAIPLLLSGRDMLAQSQTGTGKTAAFALPLM 66 Query 62 QIV 64 + Sbjct 67 DRI 69 >sp|A0A1D6LAB7|RH3B_MAIZE DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3B PE=2 SV=1 Length=743 Score = 315 bits (806), Expect = 3e-95, Method: Composition-based stats. Identities = 122/442 (28%), Positives = 202/442 (46%), Gaps = 89/442 (20%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------PKALIVEPSRELAE 300 P +G +++A G K+ G + Q + P+ L++ P+RELA+ Sbjct 120 IPALEGRDLIARAKTG-TGKTLAFGIPMIKQLIEQDDGRITRRGRTPRVLVLAPTRELAK 178 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q IK+ PKL + + GGV+ Q + L GVD+VVGTPGR+ DL++ G L Sbjct 179 QVEKEIKE-----SAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQ 233 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 L +V++LVLDEAD +L+ G+ + + + Q+P Q ++ SAT+ S+ VKKLS Sbjct 234 LGEVQYLVLDEADQMLAVGFEEDVETILQQLPA------GRQSMLFSATMPSW-VKKLSR 286 Query 421 KIMHFPTWVDLKG--EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 + ++ P +DL G ++ + + + +P+ + R Sbjct 287 RYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTTTSKRT----------------------- 323 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 +L V A K + I+F RTK D D + + Sbjct 324 ------------VLSDLITVYA----KGGKTIVFTRTKKDADEVSLALT----------N 357 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + LHGD H+R++ L F++G L+ TDVAARG+DI V +I+ LP++ + Sbjct 358 SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 417 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 +VHR GR GRA + G AI + + +++ + + D GC + Sbjct 418 FVHRSGRTGRAGKAGTAILMFTSSQKRTVKSL-------------ERDVGCNFEFISPPS 464 Query 659 LSEI----EEHLNCTISQVEPD 676 + E+ EH+ T+ V P+ Sbjct 465 IEEVLESSAEHVIATLRGVHPE 486 Score = 90.6 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 10/157 (6%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 +G+ E+ +E+ IQ + L G D++ A+TG+GKT AF IP+I+ + E Sbjct 93 LGLPDELVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKQLIE 152 Query 67 TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATK 126 D + ++G+T + + A +C ++ Sbjct 153 QD-DGRITRRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSR 211 Query 127 GLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKF 163 G+ +V G R+ SL LG ++ Sbjct 212 GV-------DVVVGTPG--RIIDLINGGSLQLGEVQY 239 >sp|Q5ACU6|RRP3_CANAL ATP-dependent rRNA helicase RRP3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=RRP3 PE=3 SV=3 Length=534 Score = 308 bits (790), Expect = 3e-95, Method: Composition-based stats. Identities = 100/442 (23%), Positives = 171/442 (39%), Gaps = 74/442 (17%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 +KF K K+L L ++ +++ +++ + + L Sbjct 111 PDAELKF-KTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHAL--------EGKDIIGL 161 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 ++ G + Q+ + P AL++ P+RELA Q + + Sbjct 162 AQTGSGKTAAFAIP----ILQSLWHAQQPYFALVLAPTRELAFQIKDTFDALG---SSMG 214 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLL 376 LR I+GG+ DQ L ++V TPGR+ D + T +L +++LV+DEAD LL Sbjct 215 LRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLL 274 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 + ++++ IP + + SAT+ + ++KL +H P V + + Sbjct 275 DMDFGPALDKILKVIPI------KRTTYLFSATMTN-KIEKLQRASLHNPVRVAVSSKYQ 327 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 D + ++ VN K Sbjct 328 TADNLVQSMMLVN----------------------------------------DGYKNTI 347 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 + + E I+F RT + F+ V LHG +R Sbjct 348 LIHLLNEFMGKSIIVFTRTVAHAQR---------TALLARILGFNAVPLHGQLSQSQRLG 398 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 +L +FK L+ TDVAARG+DI V VIN +P + + Y+HR+GR RA R G +I Sbjct 399 SLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSI 458 Query 617 SLVATEKEKVWYHVCSSRGKGC 638 SL+ +++ + S GK Sbjct 459 SLITQYDLEMYLRIESVLGKKL 480 Score = 110 bits (274), Expect = 6e-24, Method: Composition-based stats. Identities = 37/138 (27%), Positives = 62/138 (45%), Gaps = 20/138 (14%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E+ ++P++ +++E M + PT IQ+E+IP L G D++ A+TGSGKT AF+IP++ Sbjct 118 KTFKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPIL 177 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD----------GLCC 111 Q ++ QQ + + D A + Sbjct 178 QSLWH---AQQP------YFALVLAPTRELAFQIKDTFDALGSSMGLRSSCIVGGMDMMD 228 Query 112 QSREVKEW-HGCRATKGL 128 Q+R++ H AT G Sbjct 229 QARDLMRKPHVIVATPGR 246 >sp|A0A1D6GDY8|RH3A_MAIZE DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3A PE=3 SV=1 Length=745 Score = 314 bits (805), Expect = 4e-95, Method: Composition-based stats. Identities = 123/438 (28%), Positives = 199/438 (45%), Gaps = 81/438 (18%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------PKALIVEPSRELAE 300 P G +++A G K+ G + Q + P+ L++ P+RELA+ Sbjct 120 IPALGGRDLIARAKTG-TGKTLAFGIPMIKQLMEQDDGRSTRRGRTPRVLVLAPTRELAK 178 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q IK+ PKL + + GGV+ Q + L GVD+VVGTPGR+ DL++ G L Sbjct 179 QVEKEIKE-----SAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQ 233 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 L +V++LVLDEAD +L+ G+ + + + Q+P Q ++ SAT+ S+ VKKLS Sbjct 234 LGEVQYLVLDEADQMLAVGFEEDVETILQQLPA------DRQSMLFSATMPSW-VKKLSR 286 Query 421 KIMHFPTWVDLKG--EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 + ++ P +DL G ++ + + + +P+ + R Sbjct 287 RYLNNPLTIDLVGDQDEKLAEGIKLHAIPLTATSKRT----------------------- 323 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 IL V A K + I+F RTK D D + Sbjct 324 ------------ILSDLITVYA----KGGKTIVFTRTKKDADEVSLALT----------T 357 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + LHGD H+R++ L F++G L+ TDVAARG+DI V +I+ LP++ + Sbjct 358 SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 417 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 +VHR GR GRA + G AI + + +++ + R GC + ++ Sbjct 418 FVHRSGRTGRAGKAGTAILMFTSSQKRTVMSLE--RDVGCKFEFISPPSIE-------EV 468 Query 659 LSEIEEHLNCTISQVEPD 676 L EH+ T+ V P+ Sbjct 469 LESSAEHVIATLRGVHPE 486 Score = 91.0 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 34/157 (22%), Positives = 61/157 (39%), Gaps = 10/157 (6%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 +G+ E+ +E+ IQ + LGG D++ A+TG+GKT AF IP+I+ + E Sbjct 93 LGLPDELVATLEKRGITHLFPIQRAVLIPALGGRDLIARAKTGTGKTLAFGIPMIKQLME 152 Query 67 TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATK 126 D + ++G+T + + A +C ++ Sbjct 153 QD-DGRSTRRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSR 211 Query 127 GLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKF 163 G+ +V G R+ SL LG ++ Sbjct 212 GV-------DVVVGTPG--RIIDLINGGSLQLGEVQY 239 >sp|P9WH05|DEAD_MYCTU ATP-dependent RNA helicase DeaD OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=deaD PE=1 SV=1 Length=563 Score = 309 bits (792), Expect = 4e-95, Method: Composition-based stats. Identities = 109/442 (25%), Positives = 189/442 (43%), Gaps = 71/442 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL + + + + ++ A + + V L++ G Sbjct 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSD--------VVGLAQTGTGKTAA 66 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 +++ P+AL++ P+RELA Q ++ Y+ +L L I GG + Sbjct 67 F---AIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYL--SQLNVLPIYGGSS 121 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 QL+ L G +VVGTPGR+ D + L+LS+V FLVLDEAD +L+ G++D + R+ Sbjct 122 YAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERIL 181 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 ++ P+ QV + SAT+ ++KLS K +H P V K + +V + + + V Sbjct 182 SETPEYK------QVALFSATMPPA-IRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQV 234 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K D L R ++ + Sbjct 235 ARKMDALT------------------------------------------RVLEVEPFEA 252 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 I+F RTK + + + +G FS + GD +R++ + + GD+ Sbjct 253 MIVFVRTKQATEEIAEKLRARG---------FSAAAISGDVPQAQRERTITALRDGDIDI 303 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+D+ + +V+N +P + ++YVHRIGR GRA R G A+ V+ + + Sbjct 304 LVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLK 363 Query 629 HVCSSRGKGCYNTRLKEDGGCT 650 + + + +L Sbjct 364 AIEKATRQTLTEAQLPTVEDVN 385 Score = 101 bits (252), Expect = 3e-21, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 49/93 (53%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F+++ + P + +A+ ++ + PT IQA +IP ++ G DV+ A+TG+GKT AF+IP++ Sbjct 13 ATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPML 72 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + T K Q + + Sbjct 73 SKIDITSKVPQ---------ALVLVPTRELALQ 96 >sp|P9WH04|DEAD_MYCTO ATP-dependent RNA helicase DeaD OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=deaD PE=3 SV=1 Length=563 Score = 309 bits (792), Expect = 4e-95, Method: Composition-based stats. Identities = 109/442 (25%), Positives = 189/442 (43%), Gaps = 71/442 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL + + + + ++ A + + V L++ G Sbjct 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSD--------VVGLAQTGTGKTAA 66 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 +++ P+AL++ P+RELA Q ++ Y+ +L L I GG + Sbjct 67 F---AIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYL--SQLNVLPIYGGSS 121 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 QL+ L G +VVGTPGR+ D + L+LS+V FLVLDEAD +L+ G++D + R+ Sbjct 122 YAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERIL 181 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 ++ P+ QV + SAT+ ++KLS K +H P V K + +V + + + V Sbjct 182 SETPEYK------QVALFSATMPPA-IRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQV 234 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K D L R ++ + Sbjct 235 ARKMDALT------------------------------------------RVLEVEPFEA 252 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 I+F RTK + + + +G FS + GD +R++ + + GD+ Sbjct 253 MIVFVRTKQATEEIAEKLRARG---------FSAAAISGDVPQAQRERTITALRDGDIDI 303 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+D+ + +V+N +P + ++YVHRIGR GRA R G A+ V+ + + Sbjct 304 LVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLK 363 Query 629 HVCSSRGKGCYNTRLKEDGGCT 650 + + + +L Sbjct 364 AIEKATRQTLTEAQLPTVEDVN 385 Score = 101 bits (252), Expect = 3e-21, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 49/93 (53%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F+++ + P + +A+ ++ + PT IQA +IP ++ G DV+ A+TG+GKT AF+IP++ Sbjct 13 ATFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPML 72 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + T K Q + + Sbjct 73 SKIDITSKVPQ---------ALVLVPTRELALQ 96 >sp|Q0DM51|RH3_ORYSJ DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0827700 PE=2 SV=2 Length=758 Score = 315 bits (806), Expect = 4e-95, Method: Composition-based stats. Identities = 119/438 (27%), Positives = 196/438 (45%), Gaps = 81/438 (18%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--------PKALIVEPSRELAE 300 P DG +++A G K+ G + Q + P+ L++ P+RELA+ Sbjct 136 IPALDGRDLIARAKTG-TGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAK 194 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q IK+ PKL + + GGV+ Q + L GVD+VVGTPGR+ DL++ G L Sbjct 195 QVEKEIKE-----SAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQ 249 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 L +V++LVLDEAD +L+ G+ + + + Q+P Q ++ SAT+ + VKKLS Sbjct 250 LGEVKYLVLDEADQMLAVGFEEDVETILQQLPA------ERQSMLFSATMPGW-VKKLSR 302 Query 421 KIMHFPTWVDLKG--EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 + ++ P +DL G ++ + + + +P+ + R Sbjct 303 RYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTSKRT----------------------- 339 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 +L V A K + I+F +TK D D + + Sbjct 340 ------------VLSDLITVYA----KGGKTIVFTKTKRDADEVSLALT----------N 373 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + LHGD H+R++ L F++G L+ TDVAARG+DI V +I+ LP++ + Sbjct 374 SIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPET 433 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 +VHR GR GRA + G AI + + + + R GC + + + Sbjct 434 FVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLE--RDVGCRFDFISPPAIEDVLESSA-- 489 Query 659 LSEIEEHLNCTISQVEPD 676 EH+ T+ V + Sbjct 490 -----EHVIATLRGVHTE 502 Score = 89.4 bits (220), Expect = 5e-17, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 59/157 (38%), Gaps = 10/157 (6%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 +G+ ++ +E+ IQ + L G D++ A+TG+GKT AF IP+I+ + E Sbjct 109 LGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLME 168 Query 67 TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATK 126 D + ++G+ + + A +C ++ Sbjct 169 ED-DGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSR 227 Query 127 GLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKF 163 G+ +V G R+ SL LG K+ Sbjct 228 GV-------DVVVGTPG--RIIDLINGGSLQLGEVKY 255 >sp|Q8SRB2|DBP2_ENCCU ATP-dependent RNA helicase DBP2 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=DBP2 PE=3 SV=1 Length=495 Score = 307 bits (785), Expect = 6e-95, Method: Composition-based stats. Identities = 96/432 (22%), Positives = 168/432 (39%), Gaps = 71/432 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++ G + E+ + + ++ V +++ G + Sbjct 89 FEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALS--------GRDMVGIAQTGSGKTLS 140 Query 269 SQHSGN--AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 A+ Q + P L++ P+REL Q + +F LR + GG Sbjct 141 FILPALVHAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEF---CGMFNLRSTAVYGG 197 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 +++ Q+ L G ++V+ TPGRL DL G LS+V FLVLDEAD +L G+ + + Sbjct 198 ASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQLRK 257 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVV 445 + + Q ++ SAT +V+ L+E M+ V + E+ + +V Sbjct 258 I------IPKTNANRQTLMWSATWP-REVRGLAESYMNEYIQVVVGNEELKTNSKIKQIV 310 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + K + + + K Sbjct 311 EVCSGRE----------------------------------------KEDKLIGVLDNFK 330 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+ I+FC K CD+LE + G + LHGD+ + R + L+ F+ G Sbjct 331 GDKVIVFCNMKRTCDDLEYVLNRSG---------YGAAALHGDKSQNIRDKVLDDFRSGR 381 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE-RMGLAISLVATEKE 624 LI T+VA RG+D++ V VIN P ++YVHRIGR R + G++ + + Sbjct 382 RPILIATEVAGRGLDVNDVKLVINFDFPGSCEDYVHRIGRTARGNTKEGISHTFFTVGDK 441 Query 625 KVWYHVCSSRGK 636 + + Sbjct 442 ANARELIRMLRE 453 Score = 106 bits (264), Expect = 8e-23, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 4/102 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G E+ ++ E + PT IQ + P+ L G D++ A+TGSGKT +F +P Sbjct 86 IQKFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPA 145 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + KDQQ ++G I + + M F Sbjct 146 LV----HAKDQQPLRRGDGPIVLVLAPTRELVMQIKKVVDEF 183 >sp|Q7A0D2|CSHA_STAAW DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain MW2) OX=196620 GN=cshA PE=3 SV=1 Length=506 Score = 307 bits (786), Expect = 6e-95, Method: Composition-based stats. Identities = 113/530 (21%), Positives = 207/530 (39%), Gaps = 92/530 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ +++ ++ + + + ++ G Sbjct 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL--------QGIDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + ++LI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF---GIPLIEKVVGK-QGVQSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP V + Q ++ SAT+ ++ L ++ M P + + + Sbjct 168 MDKIPAV-----QRQTMLFSATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIN 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + G+ R H + E DIK V+ + K Sbjct 353 RQIEDANGRKMSALR--------------------PPHRKEVLQAREDDIKEKVENWMSK 392 Query 688 VTYGQKRAAGGGSYKGH--VDILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 + + + + VD++A +QEL E + L + Sbjct 393 ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRK 442 Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V GK+G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GKQGVQSL--ILAPTRELAMQVAEQLREFSRG 95 >sp|Q6G7M9|CSHA_STAAS DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=cshA PE=3 SV=1 Length=506 Score = 307 bits (786), Expect = 6e-95, Method: Composition-based stats. Identities = 113/530 (21%), Positives = 207/530 (39%), Gaps = 92/530 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ +++ ++ + + + ++ G Sbjct 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL--------QGIDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + ++LI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF---GIPLIEKVVGK-QGVQSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP V + Q ++ SAT+ ++ L ++ M P + + + Sbjct 168 MDKIPAV-----QRQTMLFSATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIN 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + G+ R H + E DIK V+ + K Sbjct 353 RQIEDANGRKMSALR--------------------PPHRKEVLQAREDDIKEKVENWMSK 392 Query 688 VTYGQKRAAGGGSYKGH--VDILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 + + + + VD++A +QEL E + L + Sbjct 393 ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRK 442 Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V GK+G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GKQGVQSL--ILAPTRELAMQVAEQLREFSRG 95 >sp|Q7A4G0|CSHA_STAAN DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain N315) OX=158879 GN=cshA PE=1 SV=1 Length=506 Score = 307 bits (786), Expect = 6e-95, Method: Composition-based stats. Identities = 113/530 (21%), Positives = 207/530 (39%), Gaps = 92/530 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ +++ ++ + + + ++ G Sbjct 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL--------QGIDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + ++LI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF---GIPLIEKVVGK-QGVQSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP V + Q ++ SAT+ ++ L ++ M P + + + Sbjct 168 MDKIPAV-----QRQTMLFSATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIN 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + G+ R H + E DIK V+ + K Sbjct 353 RQIEDANGRKMSALR--------------------PPHRKEVLQAREDDIKEKVENWMSK 392 Query 688 VTYGQKRAAGGGSYKGH--VDILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 + + + + VD++A +QEL E + L + Sbjct 393 ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRK 442 Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V GK+G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GKQGVQSL--ILAPTRELAMQVAEQLREFSRG 95 >sp|Q99SH6|CSHA_STAAM DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=cshA PE=1 SV=1 Length=506 Score = 307 bits (786), Expect = 6e-95, Method: Composition-based stats. Identities = 113/530 (21%), Positives = 207/530 (39%), Gaps = 92/530 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ +++ ++ + + + ++ G Sbjct 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL--------QGIDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + ++LI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF---GIPLIEKVVGK-QGVQSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP V + Q ++ SAT+ ++ L ++ M P + + + Sbjct 168 MDKIPAV-----QRQTMLFSATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIN 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + G+ R H + E DIK V+ + K Sbjct 353 RQIEDANGRKMSALR--------------------PPHRKEVLQAREDDIKEKVENWMSK 392 Query 688 VTYGQKRAAGGGSYKGH--VDILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 + + + + VD++A +QEL E + L + Sbjct 393 ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRK 442 Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V GK+G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GKQGVQSL--ILAPTRELAMQVAEQLREFSRG 95 >sp|Q5HEB9|CSHA_STAAC DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain COL) OX=93062 GN=cshA PE=3 SV=1 Length=506 Score = 307 bits (786), Expect = 6e-95, Method: Composition-based stats. Identities = 113/530 (21%), Positives = 207/530 (39%), Gaps = 92/530 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ +++ ++ + + + ++ G Sbjct 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL--------QGIDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + ++LI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF---GIPLIEKVVGK-QGVQSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP V + Q ++ SAT+ ++ L ++ M P + + + Sbjct 168 MDKIPAV-----QRQTMLFSATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIN 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + G+ R H + E DIK V+ + K Sbjct 353 RQIEDANGRKMSALR--------------------PPHRKEVLQAREDDIKEKVENWMSK 392 Query 688 VTYGQKRAAGGGSYKGH--VDILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 + + + + VD++A +QEL E + L + Sbjct 393 ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRK 442 Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V GK+G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GKQGVQSL--ILAPTRELAMQVAEQLREFSRG 95 >sp|Q2FWH5|CSHA_STAA8 DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=cshA PE=1 SV=1 Length=506 Score = 307 bits (786), Expect = 6e-95, Method: Composition-based stats. Identities = 113/530 (21%), Positives = 207/530 (39%), Gaps = 92/530 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ +++ ++ + + + ++ G Sbjct 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL--------QGIDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + ++LI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF---GIPLIEKVVGK-QGVQSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP V + Q ++ SAT+ ++ L ++ M P + + + Sbjct 168 MDKIPAV-----QRQTMLFSATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIN 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + G+ R H + E DIK V+ + K Sbjct 353 RQIEDANGRKMSALR--------------------PPHRKEVLQAREDDIKEKVENWMSK 392 Query 688 VTYGQKRAAGGGSYKGH--VDILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 + + + + VD++A +QEL E + L + Sbjct 393 ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRK 442 Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V GK+G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GKQGVQSL--ILAPTRELAMQVAEQLREFSRG 95 >sp|Q2FF45|CSHA_STAA3 DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain USA300) OX=367830 GN=cshA PE=3 SV=1 Length=506 Score = 307 bits (786), Expect = 6e-95, Method: Composition-based stats. Identities = 113/530 (21%), Positives = 207/530 (39%), Gaps = 92/530 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ +++ ++ + + + ++ G Sbjct 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL--------QGIDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + ++LI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF---GIPLIEKVVGK-QGVQSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP V + Q ++ SAT+ ++ L ++ M P + + + Sbjct 168 MDKIPAV-----QRQTMLFSATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIN 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + G+ R H + E DIK V+ + K Sbjct 353 RQIEDANGRKMSALR--------------------PPHRKEVLQAREDDIKEKVENWMSK 392 Query 688 VTYGQKRAAGGGSYKGH--VDILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 + + + + VD++A +QEL E + L + Sbjct 393 ESESRLKRISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRK 442 Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V GK+G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GKQGVQSL--ILAPTRELAMQVAEQLREFSRG 95 >sp|Q9VIF6|DDX47_DROME ATP-dependent RNA helicase DDX47 OS=Drosophila melanogaster OX=7227 GN=pths PE=1 SV=1 Length=507 Score = 307 bits (786), Expect = 7e-95, Method: Composition-based stats. Identities = 105/478 (22%), Positives = 178/478 (37%), Gaps = 76/478 (16%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYI---VKSQHSGNAQVTQTKFL------PN 285 N L E ++K P K A+ A G + SG L P Sbjct 69 NEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQ 128 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AL++ P+RELA Q + ++ +++GG+ Q L I++ Sbjct 129 RYFALVLTPTRELAFQIGEQFEALG---SGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIA 185 Query 346 TPGRLDDLVST-GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D + NL +++LV+DEAD +L+ + ++++ +P + + Sbjct 186 TPGRLVDHLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLP------RERRTF 239 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ VKKL + P V++ + + + + + K Sbjct 240 LFSATMTK-KVKKLQRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVK------------- 285 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 K Y V + E + +IFC T + Sbjct 286 ---------------------------YKDVYLVHILNELAGNSFMIFCSTCNNTVKTAL 318 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G + + LHG ++R L +FK + LI TDVA+RG+DI V Sbjct 319 MLRALG---------LAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHV 369 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 V+N +P ++Y+HR+GR RA R G AI+LV+ +++ + GK + + Sbjct 370 DVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDIELYQRIEHLLGKQLTLYKCE 429 Query 645 EDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYK 702 ED M L + E +++ G T+ G + Sbjct 430 ED-------EVMALQERVAEAQRTAKLELKDLEDTRGGHKRGGDTHDDSENFTGARKR 480 Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 53/109 (49%), Gaps = 9/109 (8%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + ++G+ + QA +E+ W P+ IQ E+IP+ L G DV+ AETGSGKTGAF++P++ Sbjct 62 TWKDLGLNEALCQACDELKWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILH 121 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + E + + + ++ A G CC Sbjct 122 ALLEN---------PQRYFALVLTPTRELAFQIGEQFEALGSGIGIKCC 161 >sp|Q8K9H6|DEAD_BUCAP ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) OX=198804 GN=deaD PE=3 SV=1 Length=601 Score = 310 bits (793), Expect = 8e-95, Method: Composition-based stats. Identities = 113/469 (24%), Positives = 186/469 (40%), Gaps = 77/469 (16%) Query 200 KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 + F LGL I + ++ A + + ++ Sbjct 5 ESTFSF------LGLNPFIIKSLSKMGYVKPSPIQAACIPLLL--------EGRDVLGMA 50 Query 260 KAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 + G + AP+ L++ P+RELA Q F KYI + Sbjct 51 QTGSGKTAAFSL---PLLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYI--MGIH 105 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG 379 L + GG QL L G IVVGTPGRL D + G LNLS + LVLDEAD +L G Sbjct 106 VLPLYGGQRYEVQLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNLYALVLDEADEMLRMG 165 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + + + + +QIP K Q + SAT+ ++++S++ M P + ++ + Sbjct 166 FIEDVETIMSQIP------KEHQTALFSATMPEA-IRRISKRFMKNPQEIKIQSNITTRP 218 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + V + K + +R Sbjct 219 DIKQSYWMVYGR-----------------------------------------KTDALIR 237 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 ++ IIF +TK + + + G ++ L+GD R+Q LE Sbjct 238 FLEVEDFSATIIFVKTKNATLEVSEALERNG---------YNSAALNGDMNQALREQTLE 288 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 R K G + LI TDVAARG+D+ + +VIN +P + ++YVHRIGR GRA R G A+ V Sbjct 289 RLKSGRLDILIATDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFV 348 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 + ++ ++ + + +L + E + +++E L Sbjct 349 ENRERRLLRNIERTINQTIPEVQLPKIEVLCKRRLE-RFAKKVQEQLES 396 Score = 109 bits (273), Expect = 1e-23, Method: Composition-based stats. Identities = 35/108 (32%), Positives = 57/108 (53%), Gaps = 9/108 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + FS +G+ P I +++ +M ++ P+ IQA IPL+L G DVL A+TGSGKT AFS+P++ Sbjct 6 STFSFLGLNPFIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLL 65 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + LK Q + + + + S F+ G+ Sbjct 66 HNLNINLKAPQ---------ILVLAPTRELAVQVAEAFSDFSKYIMGI 104 >sp|Q6GEZ3|CSHA_STAAR DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=cshA PE=3 SV=1 Length=506 Score = 307 bits (785), Expect = 9e-95, Method: Composition-based stats. Identities = 101/474 (21%), Positives = 190/474 (40%), Gaps = 71/474 (15%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ +++ ++ + + + ++ G Sbjct 3 NFKELGISDNTVQSLESMGFKEPTPIQKDSIPYAL--------QGIDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 G + + ++LI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF---GIPLIEKVVGK-QGVQSLILAPTRELAMQVAEQLREFSR---GQGVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP V + Q ++ SAT+ ++ L ++ M P + + + Sbjct 168 MDKIPAV-----QRQTMLFSATMPKA-IQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQIN 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 + + G+ R + E + ++E ++ I + Sbjct 353 RQIEDANGRKMSALR-PPHRKEVLQAREDDIKEKVENWMSKESESRLKRISTEL 405 Score = 102 bits (255), Expect = 1e-21, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ Q++E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V GK+G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GKQGVQSL--ILAPTRELAMQVAEQLREFSRG 95 >sp|Q6CB69|DED1_YARLI ATP-dependent RNA helicase DED1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DED1 PE=3 SV=1 Length=618 Score = 310 bits (794), Expect = 9e-95, Method: Composition-based stats. Identities = 88/350 (25%), Positives = 144/350 (41%), Gaps = 55/350 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q + K+F +R ++ GG +Q+ +E G D++V Sbjct 245 PTALVLAPTRELVSQIYDEAKKFA---YRSWVRPCVVYGGADIGEQMRNIERGCDLLVAA 301 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ GK++L +++LVLDEAD +L G+ I + D Q ++ Sbjct 302 PGRLVDLIDRGKVSLENIKYLVLDEADRMLDMGFEPQIRAIVQG--SGMPDVNERQTLMF 359 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT +++ L+ + ++ + S + + V V Sbjct 360 SATFP-RNIQMLARDFLKDYIFLSVGRVGSTSENITQKVEYVEDGD-------------- 404 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + + ++F TK D L Sbjct 405 --------------------------KISALLDILSAAGKGLTLVFVETKRGADYLCDVL 438 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + F +HGDR +R++ LE F+ G L+ T VAARG+DI V + Sbjct 439 ---------QSEDFPATSIHGDRSQRDRERALEMFRDGTTPILVATAVAARGLDIPNVTH 489 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 V+N LP + +YVHRIGR GRA G+A + + + + + Sbjct 490 VVNYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNKGIVRELIDILKE 539 Score = 98.7 bits (244), Expect = 4e-20, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 44/113 (39%), Gaps = 7/113 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+ + + ++ + PT +Q S+P++ G D++ A+TGSGKTG F PV Sbjct 159 INAFTSPPLEEHLLTNIKLARYNKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPV 218 Query 61 IQIVYETLKDQQEGKKGKT-------TIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + G + + YD FA S Sbjct 219 LSQSFFHGPSPTPQPTGPRHMHKKAYPTALVLAPTRELVSQIYDEAKKFAYRS 271 >sp|Q4IFI0|RRP3_GIBZE ATP-dependent rRNA helicase RRP3 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=RRP3 PE=3 SV=1 Length=486 Score = 305 bits (782), Expect = 1e-94, Method: Composition-based stats. Identities = 105/461 (23%), Positives = 171/461 (37%), Gaps = 74/461 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K KDLG+ + + ++ + + L++ G Sbjct 60 KTFKDLGVNDALCEACEKLNYKYPTPIQEKSIPVAL--------QGRDIIGLAETGSGKT 111 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P L++ P+RELA Q + I LR +I+GG Sbjct 112 AAFAL---PVLQALLDKPQPLFGLVLAPTRELATQIGQAFEALGSLIS---LRCAVIVGG 165 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L IVV TPGRL D + T +L +++L++DEAD LL + I+ Sbjct 166 LDMVPQAIALGKKPHIVVATPGRLVDHLEKTKGFSLRTLKYLIMDEADRLLDMDFGPSID 225 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHV 444 ++ +P + + + SAT+ S ++ L + P V + T+ Sbjct 226 KILKFVP------RERRTYLFSATI-SSKIESLQRASLRDPVKVSISSNKYQTVSTLLQN 278 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K + + I EH Sbjct 279 YLFIPHPQ----------------------------------------KDVHLIYLINEH 298 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 I+F RT + + G F + LHG R L +F+ G Sbjct 299 AGQSTIVFTRTVWETQRVSILLRTLG---------FGAIPLHGQLSQSSRLGALNKFRSG 349 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V V+N LP + + Y+HR+GR RA + G+AISLV Sbjct 350 TRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGVAISLVTQYDL 409 Query 625 KVWYHVCSSRGKGC--YNTRLKEDGGCTIWYNEMQLLSEIE 663 +++ + ++ GK Y T +E E Q ++ IE Sbjct 410 EIYLRIEAALGKKLAEYPTEKEEVMAFQSRVEEAQRIARIE 450 Score = 102 bits (253), Expect = 2e-21, Method: Composition-based stats. Identities = 28/67 (42%), Positives = 45/67 (67%), Gaps = 0/67 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++GV + +A E++++ PT IQ +SIP+ L G D++ AETGSGKT AF++PV+ Sbjct 60 KTFKDLGVNDALCEACEKLNYKYPTPIQEKSIPVALQGRDIIGLAETGSGKTAAFALPVL 119 Query 62 QIVYETL 68 Q + + Sbjct 120 QALLDKP 126 >sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159900 PE=2 SV=1 Length=1049 Score = 320 bits (819), Expect = 1e-94, Method: Composition-based stats. Identities = 119/500 (24%), Positives = 196/500 (39%), Gaps = 113/500 (23%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 GL ++ +K ++ L + ++K G + Sbjct 427 VQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMS--------GRDCIGIAKTGSGKTLAF 478 Query 270 QHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + K P + P LI+ P+REL Q ++IK+F K + + + I Sbjct 479 VL---PMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALG---INCVAIY 532 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYS 381 GG Q+S L+ G +IVV TPGR+ D++ S NL +V FLV+DEAD + G+ Sbjct 533 GGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFE 592 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I R+ + Q ++ SAT V+ L+ K++ P + + G V + Sbjct 593 PQITRIVQ------NTRPDRQTVLFSATFP-RQVEILARKVLTKPVEIQVGGRSVVNKDI 645 Query 442 HHVVV--PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 +V P N + RL E LG+ + Sbjct 646 TQLVEVRPENERFFRLLELLGEWFDK---------------------------------- 671 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + ++F ++ CD+L + Q G + C+ LHG + +R+ L Sbjct 672 -------GKILVFVHSQDKCDSLLKDLFQHG---------YPCLSLHGGKDQTDRESTLA 715 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 FK LI T VAARG+D+ + V+N +P+ ++YVHR+GR GRA R G A++ + Sbjct 716 DFKSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFI 775 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 + E+E+ + + L + V D+K Sbjct 776 SEEEERYAPDLVKA--------------------------------LELSEQAVPEDLKG 803 Query 680 PVDEFDGKVTYGQKRAAGGG 699 D F KV G ++A G G Sbjct 804 LADRFMAKVKQGTEQAHGTG 823 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 35/154 (23%), Positives = 66/154 (43%), Gaps = 20/154 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + + G+ ++ ++++ + P IQA+++P+I+ G D + A+TGSGKT AF +P+ Sbjct 423 IKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPM 482 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLC 110 ++ V KDQ G I + + + + F+ G G+ Sbjct 483 LRHV----KDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALGINCVAIYGGSGVA 538 Query 111 CQSREVKE-WHGCRATKGLMKGKHYYEVSCHDQG 143 Q E+K T G ++ C G Sbjct 539 QQISELKRGAEIVVCTPGR-----MIDILCTSSG 567 >sp|Q4WX43|IF4A_ASPFU ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=tif1 PE=3 SV=1 Length=406 Score = 302 bits (774), Expect = 2e-94, Method: Composition-based stats. Identities = 110/426 (26%), Positives = 186/426 (44%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F A LK L+ + +G E + + + K D +G + + + Sbjct 27 FDAMDLKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQK 86 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +ALI+ P+RELA+Q + +++ + IGG R+ + L+ G Sbjct 87 LDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTNVREDMKALQEG 143 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VVGTPGR+ D++ L ++ +LDEAD +LS+G+++ I + +PQ T Sbjct 144 PQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQLLPQST---- 199 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 200 --QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKL---- 252 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 253 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 277 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD + +R ++ F+ G R LI TD+ ARGI Sbjct 278 DWLTDKLT---------ARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGI 328 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 329 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 383 Query 640 NTRLKE 645 +T+++E Sbjct 384 STQIEE 389 Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 40/77 (52%), Gaps = 0/77 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDAMDLKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLKDQQEGKKGKT 79 + +K Q T Sbjct 86 KLDPNVKGCQALILAPT 102 >sp|Q49Z29|CSHA_STAS1 DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=cshA PE=3 SV=1 Length=506 Score = 305 bits (782), Expect = 2e-94, Method: Composition-based stats. Identities = 100/435 (23%), Positives = 181/435 (42%), Gaps = 70/435 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ ++ +++ A ++ + + ++ G Sbjct 3 NFKELGISDKMAETLQSMGFNEATPIQKESIPLAL--------EGKDVLGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + + ++LI+ P+RELA Q ++K F K ++ + + GG+ Sbjct 55 AF----GIPLIEKVADQEGVQSLILAPTRELAMQVAESLKAFAK---GQNIQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + + L+LDEAD +++ G+ D + + Sbjct 108 PIDRQIKALKKGPQIVVGTPGRVIDHLNRRTLKTNDIHTLILDEADEMMNMGFIDDMKFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP ++ Q ++ SAT+ ++ L ++ M P V + + Sbjct 168 MDKIP-----AEQRQTMLFSATMPKA-IQTLVQQFMKSPVIVKTMNNEMSDPQIEEYYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTSFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L I +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALISKG---------YKAEGLHGDITQAKRLEVLKKFKNDQLD 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+AI+ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKKGVAITFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTR 642 + + + R Sbjct 353 RQIEQANKRQMTALR 367 Score = 100 bits (250), Expect = 4e-21, Method: Composition-based stats. Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 10/107 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ ++A+ ++ M + T IQ ESIPL L G DVL A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDKMAETLQSMGFNEATPIQKESIPLALEGKDVLGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 I+ V + QEG + + + M + AFA G + Sbjct 61 IEKVAD-----QEGVQ-----SLILAPTRELAMQVAESLKAFAKGQN 97 >sp|P19109|DDX17_DROME ATP-dependent RNA helicase p62 OS=Drosophila melanogaster OX=7227 GN=Rm62 PE=1 SV=3 Length=719 Score = 312 bits (799), Expect = 2e-94, Method: Composition-based stats. Identities = 103/426 (24%), Positives = 165/426 (39%), Gaps = 65/426 (15%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + ++ Q ++ F V ++K G + + Sbjct 292 VMKEIRRQGYKAPTAIQAQGWPIAMSGSNF--------VGIAKTGSGKTLGYILPAIVHI 343 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + L + P AL++ P+RELA+Q +F + +R + GG Q+ Sbjct 344 NNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFG---SSSYVRNTCVFGGAPKGGQMRD 400 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L+ G +IV+ TPGRL D +S G NL + +LVLDEAD +L G+ I ++ +QI Sbjct 401 LQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQI---- 456 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +VK+L+E + +++ E S + VV + Sbjct 457 --RPDRQTLMWSATWPK-EVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDE---- 509 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 + LK + + IIF Sbjct 510 -------------------------------FSKEEKLKTLLSDIYDTSESPGKIIIFVE 538 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK DNL ++ G C +HGD+ ER L F+ G L+ TDV Sbjct 539 TKRRVDNLVRFIRSFG---------VRCGAIHGDKSQSERDFVLREFRSGKSNILVATDV 589 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARG+D+ G+ YVIN P ++Y+HRIGR GR+ G + + K + Sbjct 590 AARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVL 649 Query 635 GKGCYN 640 + Sbjct 650 REANQE 655 Score = 95.2 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 55/374 (15%), Positives = 121/374 (32%), Gaps = 56/374 (15%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FSE+ + + + + + PT IQA+ P+ + G + + A+TGSGKT + +P Sbjct 280 IQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPA 339 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS--DGLCCQSREVKE 118 I + +QQ ++G I + + + F S C K Sbjct 340 IVHI----NNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKG 395 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQ 178 +G E+ G S +L T + + + Sbjct 396 GQMRDLQRGC-------EIVIATPGRLIDFLSAGSTNLKRCT----YLVLDEADRMLDMG 444 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAEL 238 F+ + + D+ + +S ++ + + + EL Sbjct 445 FEPQIRKIVSQ------IRPDRQTLMWS--ATWPKEVKQLAEDFLGN--YIQINIGSLEL 494 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 N V + + ++ +P +I+ Sbjct 495 SANHN--------IRQVVDVCDE-----FSKEEKLKTLLSDIYDTSESPGKIIIF----- 536 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGTPGRLDDLV 354 +T + ++I + +R I G + ++ VL +I+V T D+ Sbjct 537 -VETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVAT-----DVA 590 Query 355 STGKLNLSQVRFLV 368 + G L++ +++++ Sbjct 591 ARG-LDVDGIKYVI 603 >sp|Q7RV88|IF4A_NEUCR ATP-dependent RNA helicase eIF4A OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=tif-1 PE=3 SV=2 Length=397 Score = 302 bits (773), Expect = 2e-94, Method: Composition-based stats. Identities = 112/428 (26%), Positives = 188/428 (44%), Gaps = 75/428 (18%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ--------V 277 F LK L+ + +G E + + + K ++ SG + + Sbjct 26 FDEMNLKPELLRGIYAYGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFSISVL 83 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + A +ALI+ P+RELA+Q + +++ + IGG + RD + L+ Sbjct 84 QKIDPSLKACQALILAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTSVRDDMKALQ 140 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 +G +VVGTPGR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T Sbjct 141 DGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST-- 198 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 199 ----QVVLLSATMP-QDVLEVTTKFMREPVRILVKKDELTLEGIKQFYIAVEKEEWKL-- 251 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IFC T+ Sbjct 252 --------------------------------DTLSDLYETVTIT-----QAVIFCNTRR 274 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L F+ +HGD +R ++ F+ G R LI TD+ AR Sbjct 275 KVDWLTDKLT---------ARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLAR 325 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 326 GIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQ 380 Query 638 CYNTRLKE 645 Y+T+++E Sbjct 381 FYSTQIEE 388 Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats. Identities = 26/79 (33%), Positives = 44/79 (56%), Gaps = 0/79 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F EM + PE+ + + + P+ IQ +I ++ G DV+ A++G+GKT FSI V Sbjct 23 VDSFDEMNLKPELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISV 82 Query 61 IQIVYETLKDQQEGKKGKT 79 +Q + +LK Q T Sbjct 83 LQKIDPSLKACQALILAPT 101 >sp|B4F1V3|RHLB_PROMH ATP-dependent RNA helicase RhlB OS=Proteus mirabilis (strain HI4320) OX=529507 GN=rhlB PE=3 SV=1 Length=432 Score = 303 bits (776), Expect = 2e-94, Method: Composition-based stats. Identities = 111/407 (27%), Positives = 177/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFL----PNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q + + + Sbjct 51 GQAQTGTGKTLAFLTSTFHYLLTHPAKEGHEKNQPRALIMAPTRELAVQIYTDAQPLAQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + ++ L GG +QL VL NGVDIV+GT GRL D V G +NL+ ++ +VLDEA Sbjct 110 --STGVKMGLAYGGDGYDEQLKVLNNGVDIVIGTTGRLIDYVKQGHINLNAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P ++ SATL S+ V++L+ + M+ P +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPNAA----ERMNMLFSATL-SYRVRELAFEQMNNPEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E ++ + P N + RL + L Sbjct 223 PEQKTGFSIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E ++ IIF TK CD++ + G L GD Sbjct 251 ---------IEEEWPERCIIFANTKHRCDDIWAHLAADG---------HRVGLLTGDVPQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + LE F +G++ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + Sbjct 293 KKRLRILEDFTQGNIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGK 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + ++ D T + Sbjct 353 SGNSISLACEEYALNLPAIETYIQHAIPVSKYNSDALLTDLPEPKRR 399 Score = 97.9 bits (242), Expect = 2e-20, Method: Composition-based stats. Identities = 57/358 (16%), Positives = 121/358 (34%), Gaps = 66/358 (18%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS+ + P++ +A+E+ + T IQA ++P+ + G D+ A+TG+GKT AF Sbjct 9 KKFSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGHDIAGQAQTGTGKTLAFLTSTF 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + EG + + + + Y ++ + + G Sbjct 69 HYLLTHPAK--EGHEKNQPRALIMAPTRELAVQIYT--------------DAQPLAQSTG 112 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 + + ++ + G+ + +GT + G + N Sbjct 113 VKMGLAYGGDGYDEQLKVLNNGV----------DIVIGTTGRLIDYVKQGHINLNA---- 158 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAEL 238 I + +D+ + KD+ F P+ + LF A L Sbjct 159 ----------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPNAAERMNMLFSAT-LSYRVR 206 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVK-----SQHSGNAQVTQTKFLPNAP-KALIV 292 + F + + + G+ +K + ++ QT P + +I Sbjct 207 ELAFEQMNNPEYVEVEP----EQKTGFSIKEELFYPSNEEKMRLLQTLIEEEWPERCIIF 262 Query 293 EPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + ++ R L+ G V + +L +LE+ +DI+V T Sbjct 263 ANTK-------HRCDDIWAHLAADGHRVGLLTGDVPQKKRLRILEDFTQGNIDILVAT 313 >sp|A7EGL7|IF4A_SCLS1 ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=tif1 PE=3 SV=1 Length=398 Score = 302 bits (772), Expect = 3e-94, Method: Composition-based stats. Identities = 112/428 (26%), Positives = 186/428 (43%), Gaps = 75/428 (18%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ--------V 277 F LK L+ + +G E + + + K ++ SG + + Sbjct 27 FDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFSISVL 84 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + +ALI+ P+RELA+Q + +++ + IGG + RD + L+ Sbjct 85 QKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMN---VECHACIGGTSVRDDMKALQ 141 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 +G +VVGTPGR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T Sbjct 142 DGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST-- 199 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ DV +++ K M P + +K + + + + V + +L Sbjct 200 ----QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKAELTLEGIKQFYIAVEKEDWKL-- 252 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IFC T+ Sbjct 253 --------------------------------DTLSDLYETVTIT-----QAVIFCNTRR 275 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L F+ +HGD +R ++ F+ G R LI TD+ AR Sbjct 276 KVDWLTDKLT---------ARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLAR 326 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E ++ + + Sbjct 327 GIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDVRMMREI-----EQ 381 Query 638 CYNTRLKE 645 Y+T+++E Sbjct 382 FYSTQIEE 389 Score = 95.6 bits (236), Expect = 1e-19, Method: Composition-based stats. Identities = 25/79 (32%), Positives = 42/79 (53%), Gaps = 0/79 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F M + PE+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI V Sbjct 24 VDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISV 83 Query 61 IQIVYETLKDQQEGKKGKT 79 +Q + +K Q T Sbjct 84 LQKLDPNVKQCQALILAPT 102 >sp|Q088J2|RHLB_SHEFN ATP-dependent RNA helicase RhlB OS=Shewanella frigidimarina (strain NCIMB 400) OX=318167 GN=rhlB PE=3 SV=1 Length=434 Score = 303 bits (775), Expect = 3e-94, Method: Composition-based stats. Identities = 111/453 (25%), Positives = 183/453 (40%), Gaps = 71/453 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K D L EI + ++ L ++ ++ G Sbjct 8 TKKFADFPLKPEILAALNENGFEFCTPIQALSLPILLNAKD--------IAGQAQTGTGK 59 Query 266 IVKSQHSG-NAQVTQTKF---LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 + + N + P+A+I+ P+RELA Q + K + L+ Sbjct 60 TMAFLVATFNHLLNVAAPESRKATEPRAIIMAPTRELAIQIAKDAKLLAAHTG---LKVG 116 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 ++ GG + Q +VL+ GVDI++GT GR+ D V G ++LS ++ +VLDEAD + G+ Sbjct 117 IVYGGESYETQRAVLDKGVDILIGTTGRIIDYVRQGVISLSHIQAVVLDEADRMFDLGFI 176 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I + ++P D K ++ SATL S V++L+ M+ P V+++ + + Sbjct 177 KDIRFLFRRMP----DAKSRLNMLFSATL-SMKVQELAYDHMNDPEKVEIEPLEKTSKNI 231 Query 442 H-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + P RL + Sbjct 232 KEEIFYPSMEDKMRL-----------------------------------------LLSL 250 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 I+E D+AI+F TK C+ L Y +G L GD +R + LE+ Sbjct 251 IEEDWPDKAIVFSNTKHSCEKLWSYL---------EGDGHRVGLLTGDVPQKKRIRILEQ 301 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F G++ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G++IS Sbjct 302 FTSGEIDVLVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISISFAC 361 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 E + + + +D Sbjct 362 EEYALNLPEIETYINHSIPVSNYDKDALLDDIP 394 Score = 109 bits (271), Expect = 6e-24, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 118/356 (33%), Gaps = 62/356 (17%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F++ + PEI A+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 9 KKFADFPLKPEILAALNENGFEFCTPIQALSLPILLNAKDIAGQAQTGTGKTMAFLVATF 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + E +K + + + + + GL Sbjct 69 NHLLNVAAP--ESRKATEPRAIIMAPTRELAIQI-AKDAKLLAAHTGLKV---------- 115 Query 122 CRATKGLMKGKHYYEVS--CHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKS-HNKQ 178 G++ G YE D+G+ + +GT + G S + Q Sbjct 116 -----GIVYGGESYETQRAVLDKGV----------DILIGTTGRIIDYVRQGVISLSHIQ 160 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMK---NQALFPACVLK 234 + +D+ F KD+ F P K N +K Sbjct 161 A----------------VVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMK 204 Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEP 294 EL ++ + K + + S + KA++ Sbjct 205 VQELAYDHMNDPEKVEIEPLEKTSKNIKEEIFYPSMEDKMRLLLSLIEEDWPDKAIVFSN 264 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ ++ ++ Y++ R L+ G V + ++ +LE +D++V T Sbjct 265 TK-------HSCEKLWSYLEGDGHRVGLLTGDVPQKKRIRILEQFTSGEIDVLVAT 313 >sp|Q8Y7M8|DBPA_LISMO ATP-dependent RNA helicase DbpA OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=dbpA PE=2 SV=1 Length=470 Score = 304 bits (778), Expect = 3e-94, Method: Composition-based stats. Identities = 126/472 (27%), Positives = 187/472 (40%), Gaps = 85/472 (18%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 +L L+ EI + A ++ A + E+ VA S+ G Sbjct 2 NNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGED--------IVAKSQTGSGKTAAF 53 Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 Q ++ N P+ALI+ P+RELA Q ++ +++ I G Sbjct 54 AIPI---AEQVEWEENKPQALIIVPTRELAMQVKTECTNIGRF---KRVKAAAIYGQSPF 107 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 Q L IVVGTPGRL D + G LN+ +V LVLDE D +LS G+ D + + + Sbjct 108 AKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFIDQVEDILS 167 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 ++P K+ Q + SAT+ +++ L ++ P +++ E + P + HV + + Sbjct 168 RLP------KQRQNLFFSATMP-EEMQDLIKRYQDNPMVIEMASEKTNP--IFHVEMQTD 218 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 K L + L D A Sbjct 219 NKEKTLKDVLI------------------------------------------TENPDSA 236 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIFC TK D L +HG + +R + ++ FK G RFL Sbjct 237 IIFCNTKNQVDELTDLL------------DVKASKIHGGLRQEDRFRAMDDFKSGKSRFL 284 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 I TDVA RGID+ V VIN LP EK+NYVHRIGR GRA + G AIS V T + + Sbjct 285 IATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGRTGRAGKSGKAISFVKTNENPLLRD 344 Query 630 --------VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 + R ++ ED + E LN I ++ Sbjct 345 IEEMLDVTIEKKRKPTVIEVKVNEDAFRKKQQKRPTIKKARGEKLNKNIMKL 396 Score = 86.7 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 9/99 (9%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 + + + EI +A+ E+ + T +Q IP+ L G D++ ++TGSGKT AF+IP+ + V Sbjct 2 NNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQTGSGKTAAFAIPIAEQV 61 Query 65 YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 Q + M + Sbjct 62 EWEENKPQ---------ALIIVPTRELAMQVKTECTNIG 91 >sp|Q2HFP1|IF4A_CHAGB ATP-dependent RNA helicase eIF4A OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=TIF1 PE=3 SV=1 Length=397 Score = 301 bits (771), Expect = 4e-94, Method: Composition-based stats. Identities = 111/428 (26%), Positives = 191/428 (45%), Gaps = 75/428 (18%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ--------V 277 F LK+ L+ + +G E + + + K ++ SG + + Sbjct 26 FDDMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFSISVL 83 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + + +ALI+ P+RELA+Q + +++ + IGG + RD + L+ Sbjct 84 QKIDPTVKSCQALILAPTRELAQQIQKVVIAIGDFMN---IECHACIGGTSVRDDMKALQ 140 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 +G ++VGTPGR+ D++ L Q++ VLDEAD +LS+G+++ I + +PQ T Sbjct 141 DGPQVIVGTPGRVHDMIQRRILKTDQMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST-- 198 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 199 ----QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEDWKL-- 251 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IFC T+ Sbjct 252 --------------------------------DTLSDLYETVTIT-----QAVIFCNTRR 274 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ +HGD +R ++ F+ G R LI TD+ AR Sbjct 275 KVDWLTDKL---------QARDFTVSAMHGDMDQTQRDLIMKEFRSGSSRVLIATDLLAR 325 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 326 GIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQ 380 Query 638 CYNTRLKE 645 Y+T+++E Sbjct 381 FYSTQIEE 388 Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 0/79 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + E+ + + + P+ IQ +I ++ G DV+ A++G+GKT FSI V Sbjct 23 VDSFDDMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISV 82 Query 61 IQIVYETLKDQQEGKKGKT 79 +Q + T+K Q T Sbjct 83 LQKIDPTVKSCQALILAPT 101 >sp|Q5B948|IF4A_EMENI ATP-dependent RNA helicase eIF4A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=tif1 PE=3 SV=2 Length=398 Score = 301 bits (770), Expect = 5e-94, Method: Composition-based stats. Identities = 115/426 (27%), Positives = 190/426 (45%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F + LK L+ + +G E + + + K D +G + + + Sbjct 27 FDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQK 86 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 A +ALIV P+RELA+Q + +++ ++ IGG A RD ++ L G Sbjct 87 LDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMN---IQCHACIGGTAVRDDMNALREG 143 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVVGTPGR+ D++ L Q++ +LDEAD +LS+G+++ I + +PQ T Sbjct 144 PQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQST---- 199 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 200 --QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKL---- 252 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 253 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 277 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD + +R ++ F+ G R LI TD+ ARGI Sbjct 278 DWLTDKLT---------ARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGI 328 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 329 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 383 Query 640 NTRLKE 645 +T+++E Sbjct 384 STQIEE 389 Score = 91.0 bits (224), Expect = 3e-18, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 39/70 (56%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLKDQQ 72 + +K Q Sbjct 86 KLDPNVKACQ 95 >sp|A1D7N3|IF4A_NEOFI ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=tif1 PE=3 SV=1 Length=398 Score = 301 bits (770), Expect = 5e-94, Method: Composition-based stats. Identities = 109/426 (26%), Positives = 186/426 (44%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F + LK L+ + +G E + + + K D +G + + + Sbjct 27 FDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQK 86 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +ALI+ P+RELA+Q + +++ + IGG R+ + L+ G Sbjct 87 LDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTNVREDMKALQEG 143 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VVGTPGR+ D++ L ++ +LDEAD +LS+G+++ I + +PQ T Sbjct 144 PQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEMLSRGFTEQIYDIFQLLPQST---- 199 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 200 --QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKL---- 252 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 253 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 277 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD + +R ++ F+ G R LI TD+ ARGI Sbjct 278 DWLTDKLT---------ARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGI 328 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 329 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 383 Query 640 NTRLKE 645 +T+++E Sbjct 384 STQIEE 389 Score = 92.1 bits (227), Expect = 1e-18, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 40/77 (52%), Gaps = 0/77 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + + + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLKDQQEGKKGKT 79 + +K Q T Sbjct 86 KLDPNVKGCQALILAPT 102 >sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana OX=3702 GN=RH10 PE=1 SV=2 Length=456 Score = 303 bits (775), Expect = 5e-94, Method: Composition-based stats. Identities = 113/503 (22%), Positives = 188/503 (37%), Gaps = 79/503 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K +LG+ E+ + ++ L F + L++ G Sbjct 9 KTFAELGVREELVKACERLGWKNPSKIQAEALPFAL--------EGKDVIGLAQTGSGKT 60 Query 267 VKSQHSG---------NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 +++ + + A A ++ P+RELA Q + + Sbjct 61 GAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGA---DIS 117 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLL 376 LR +++GG+ Q L ++V TPGRL D +S T +L +++LVLDEAD LL Sbjct 118 LRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLL 177 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 ++ + +N++ +IP + + SAT+ V+KL + P ++ + S Sbjct 178 NEDFEKSLNQILEEIPL------ERKTFLFSATMTK-KVRKLQRACLRNPVKIEAASKYS 230 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 DT+ V K K Y Sbjct 231 TVDTLKQQYRFVAAK----------------------------------------YKDCY 250 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 V + E ++IF RT L G F + + G +R Sbjct 251 LVYILSEMPESTSMIFTRTCDGTRFLALVLRSLG---------FRAIPISGQMTQSKRLG 301 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 L +FK G+ L+CTDVA+RG+DI V VIN +P ++Y+HR+GR RA R G+ I Sbjct 302 ALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGI 361 Query 617 SLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY--NEMQLLSEIEEHLNCTISQVE 674 SLV + + + + GK +ED ++ E + LS + + + Sbjct 362 SLVNQYELEWYIQIEKLIGKKLPEYPAEEDEVLSLLERVAEAKKLSAMNMKESGGRKRRG 421 Query 675 PDIKVPVDEFDGKVTYGQKRAAG 697 D + G G K G Sbjct 422 EDDEESERFLGGNKDRGNKERGG 444 Score = 112 bits (280), Expect = 6e-25, Method: Composition-based stats. Identities = 39/115 (34%), Positives = 61/115 (53%), Gaps = 5/115 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+E+GV E+ +A E + W P+ IQAE++P L G DV+ A+TGSGKTGAF+IP+ Sbjct 8 VKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPI 67 Query 61 IQIVYETLKDQQEGKKGKTTIKT----GASVLNKWQMNPYDRGSAFAIGSDGLCC 111 +Q + E + D + KKG+ S + + ++ A C Sbjct 68 LQALLEYVYDSEP-KKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCA 121 >sp|A6RJ45|IF4A_BOTFB ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=tif1 PE=3 SV=1 Length=398 Score = 301 bits (770), Expect = 5e-94, Method: Composition-based stats. Identities = 111/428 (26%), Positives = 186/428 (43%), Gaps = 75/428 (18%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ--------V 277 F LK L+ + +G E + + + K ++ SG + + Sbjct 27 FDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKG--HDVIAQAQSGTGKTATFSISVL 84 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + +ALI+ P+RELA+Q + +++ + IGG + RD + L+ Sbjct 85 QKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFMN---VECHACIGGTSVRDDMKALQ 141 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 +G +VVGTPGR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T Sbjct 142 DGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST-- 199 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ DV +++ K M P + +K + + + + V + +L Sbjct 200 ----QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKAELTLEGIKQFYIAVEKEDWKL-- 252 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IFC T+ Sbjct 253 --------------------------------DTLSDLYETVTIT-----QAVIFCNTRR 275 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L F+ +HGD +R ++ F+ G R LI TD+ AR Sbjct 276 KVDWLTDKLT---------ARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLAR 326 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Sbjct 327 GIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQ 381 Query 638 CYNTRLKE 645 Y+T+++E Sbjct 382 FYSTQIEE 389 Score = 95.6 bits (236), Expect = 1e-19, Method: Composition-based stats. Identities = 25/79 (32%), Positives = 42/79 (53%), Gaps = 0/79 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F M + PE+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI V Sbjct 24 VDSFDTMNLKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISV 83 Query 61 IQIVYETLKDQQEGKKGKT 79 +Q + +K Q T Sbjct 84 LQKLDPNVKQCQALILAPT 102 >sp|C3LQR1|RHLB_VIBCM ATP-dependent RNA helicase RhlB OS=Vibrio cholerae serotype O1 (strain M66-2) OX=579112 GN=rhlB PE=3 SV=1 Length=438 Score = 302 bits (773), Expect = 6e-94, Method: Composition-based stats. Identities = 121/503 (24%), Positives = 201/503 (40%), Gaps = 91/503 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D GL ++ ++ + ++ L ++ ++ G + Sbjct 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQD--------IAGQAQTGTGKTLA 62 Query 269 SQHSGNAQVTQTKFLPN----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + T P+A+I+ P+RELA Q N+ + + + L+ L Sbjct 63 FLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPL---LASTGLKAALAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + QL+ L++GVDI++GT GR+ D NL+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P+ K ++ SATL S+ V++L+ + M+ P V ++ E + Sbjct 180 RFLFRRMPE----PKDRLNMLFSATL-SYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N L + L I+E Sbjct 235 LFYPSNEHKMALLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AIIF TK C+ + + L GD +R++ LE+F + Sbjct 254 EWPDRAIIFANTKHRCEQIWAHL---------AADNHRVGLLTGDVPQKKRERILEQFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 GDV L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 305 GDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + S E T Y+ LL+++ L+ S + Sbjct 365 AINLPAIES----------YIEHAIPTSDYDPSALLTDLPAPLSLRSSP----------Q 404 Query 684 FDGKVTYGQKRAAGGGSYKGHVD 706 T G + + GG+ K Sbjct 405 QRRTNTAGSRNSNNGGNRKPQQR 427 Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats. Identities = 58/351 (17%), Positives = 114/351 (32%), Gaps = 56/351 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ G+ P++ +E+ ++ T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+ + + + ++ + + G + Sbjct 71 LLTTPAA--EGRAETQPRAIIMAPTRELAIQIFN--------------DAEPLLASTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A + +++ G+ + +GT + D Y Sbjct 115 AALAYGGESYDKQLAKLQSGV----------DILIGTTG--------------RIIDFYK 150 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEI---PPHMKNQALFPACVLKNAELK 239 + + I + +D+ F KD+ F P N + EL Sbjct 151 QRVFNLNHIQAVV-LDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELA 209 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELA 299 F + + + S A + +A+I ++ Sbjct 210 FEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEEEWPDRAIIFANTKHRC 269 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 EQ ++ R L+ G V + + +LE VDI+V T Sbjct 270 EQIW-------AHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVAT 313 >sp|Q9KV52|RHLB_VIBCH ATP-dependent RNA helicase RhlB OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=rhlB PE=3 SV=1 Length=438 Score = 302 bits (773), Expect = 6e-94, Method: Composition-based stats. Identities = 121/503 (24%), Positives = 201/503 (40%), Gaps = 91/503 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D GL ++ ++ + ++ L ++ ++ G + Sbjct 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQD--------IAGQAQTGTGKTLA 62 Query 269 SQHSGNAQVTQTKFLPN----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + T P+A+I+ P+RELA Q N+ + + + L+ L Sbjct 63 FLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPL---LASTGLKAALAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + QL+ L++GVDI++GT GR+ D NL+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P+ K ++ SATL S+ V++L+ + M+ P V ++ E + Sbjct 180 RFLFRRMPE----PKDRLNMLFSATL-SYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N L + L I+E Sbjct 235 LFYPSNEHKMALLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AIIF TK C+ + + L GD +R++ LE+F + Sbjct 254 EWPDRAIIFANTKHRCEQIWAHL---------AADNHRVGLLTGDVPQKKRERILEQFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 GDV L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 305 GDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + S E T Y+ LL+++ L+ S + Sbjct 365 AINLPAIES----------YIEHAIPTSDYDPSALLTDLPAPLSLRSSP----------Q 404 Query 684 FDGKVTYGQKRAAGGGSYKGHVD 706 T G + + GG+ K Sbjct 405 QRRTNTAGSRNSNNGGNRKPQQR 427 Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats. Identities = 58/351 (17%), Positives = 114/351 (32%), Gaps = 56/351 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ G+ P++ +E+ ++ T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+ + + + ++ + + G + Sbjct 71 LLTTPAA--EGRAETQPRAIIMAPTRELAIQIFN--------------DAEPLLASTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A + +++ G+ + +GT + D Y Sbjct 115 AALAYGGESYDKQLAKLQSGV----------DILIGTTG--------------RIIDFYK 150 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEI---PPHMKNQALFPACVLKNAELK 239 + + I + +D+ F KD+ F P N + EL Sbjct 151 QRVFNLNHIQAVV-LDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELA 209 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELA 299 F + + + S A + +A+I ++ Sbjct 210 FEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEEEWPDRAIIFANTKHRC 269 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 EQ ++ R L+ G V + + +LE VDI+V T Sbjct 270 EQIW-------AHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVAT 313 >sp|A5F3R4|RHLB_VIBC3 ATP-dependent RNA helicase RhlB OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=rhlB PE=3 SV=1 Length=438 Score = 302 bits (773), Expect = 6e-94, Method: Composition-based stats. Identities = 121/503 (24%), Positives = 201/503 (40%), Gaps = 91/503 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D GL ++ ++ + ++ L ++ ++ G + Sbjct 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQD--------IAGQAQTGTGKTLA 62 Query 269 SQHSGNAQVTQTKFLPN----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + T P+A+I+ P+RELA Q N+ + + + L+ L Sbjct 63 FLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPL---LASTGLKAALAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + QL+ L++GVDI++GT GR+ D NL+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P+ K ++ SATL S+ V++L+ + M+ P V ++ E + Sbjct 180 RFLFRRMPE----PKDRLNMLFSATL-SYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N L + L I+E Sbjct 235 LFYPSNEHKMALLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AIIF TK C+ + + L GD +R++ LE+F + Sbjct 254 EWPDRAIIFANTKHRCEQIWAHL---------AADNHRVGLLTGDVPQKKRERILEQFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 GDV L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 305 GDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + S E T Y+ LL+++ L+ S + Sbjct 365 AINLPAIES----------YIEHAIPTSDYDPSALLTDLPAPLSLRSSP----------Q 404 Query 684 FDGKVTYGQKRAAGGGSYKGHVD 706 T G + + GG+ K Sbjct 405 QRRTNTAGSRNSNNGGNRKPQQR 427 Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats. Identities = 58/351 (17%), Positives = 114/351 (32%), Gaps = 56/351 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ G+ P++ +E+ ++ T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+ + + + ++ + + G + Sbjct 71 LLTTPAA--EGRAETQPRAIIMAPTRELAIQIFN--------------DAEPLLASTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A + +++ G+ + +GT + D Y Sbjct 115 AALAYGGESYDKQLAKLQSGV----------DILIGTTG--------------RIIDFYK 150 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEI---PPHMKNQALFPACVLKNAELK 239 + + I + +D+ F KD+ F P N + EL Sbjct 151 QRVFNLNHIQAVV-LDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELA 209 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELA 299 F + + + S A + +A+I ++ Sbjct 210 FEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTLIEEEWPDRAIIFANTKHRC 269 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 EQ ++ R L+ G V + + +LE VDI+V T Sbjct 270 EQIW-------AHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDILVAT 313 >sp|Q4P733|DED1_USTMA ATP-dependent RNA helicase DED1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DED1 PE=3 SV=1 Length=672 Score = 309 bits (792), Expect = 7e-94, Method: Composition-based stats. Identities = 90/355 (25%), Positives = 145/355 (41%), Gaps = 54/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P LI+ P+REL Q + + K+ ++ ++ GG QL +E G D++ T Sbjct 276 PSTLILAPTRELVSQIHDEAR---KFTYRSWVKPAVVYGGADIVTQLRQIERGCDLLSAT 332 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ G+++LS VRFLVLDEAD +L G+ I R+ + Q ++ Sbjct 333 PGRLVDLMERGRISLSNVRFLVLDEADRMLDMGFEPQIRRIVEG--EDMPGVMDRQTLMF 390 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT D++ L++ + ++ + S + + + V R Sbjct 391 SATFP-RDIQLLAKDFLKEYVFLSVGRVGSTSENITQKIEYVEDDDKR------------ 437 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 +IF TK D L + Sbjct 438 ---------------------------SVLLDVLASMPSGGLTLIFVETKRMADMLSDFL 470 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 ++ + +HGDR ER++ LE F+ G ++ T VAARG+DI V + Sbjct 471 LR---------SKIGATSIHGDRTQRERERALELFRSGKTPIMVATAVAARGLDIPNVTH 521 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 V+N LP + +YVHRIGR GRA +G A + + + + + Sbjct 522 VVNYDLPSDVDDYVHRIGRTGRAGNVGHATAFFNRGNKNIVRDLIELLKEANQEV 576 Score = 96.4 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 25/115 (22%), Positives = 48/115 (42%), Gaps = 9/115 (8%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + + + ++ + PT +Q SIP+I G D++ A+TGSGKTG F P+ Sbjct 188 VTTFTSPPIDAHLLENIKLARYTNPTPVQKYSIPIIKLGRDLMGCAQTGSGKTGGFLFPI 247 Query 61 IQIVYETLK------DQQEGKKGKTTIKTGASVL---NKWQMNPYDRGSAFAIGS 106 + ++ + +G + +L + +D F S Sbjct 248 LSALFTHGPPPPSAAEMAQGGYNRRKAYPSTLILAPTRELVSQIHDEARKFTYRS 302 >sp|A4QVP2|IF4A_PYRO7 ATP-dependent RNA helicase eIF4A OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=TIF1 PE=3 SV=1 Length=396 Score = 300 bits (769), Expect = 7e-94, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 185/426 (43%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN 285 F LK+ L+ + +G E + + + K D +G L Sbjct 25 FDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQK 84 Query 286 ------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +ALI+ P+RELA+Q + +++ + IGG + RD + L++G Sbjct 85 IDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTSVRDDMKALQDG 141 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VVGTPGR+ D++ L ++ VLDEAD +LS+G+++ I + +PQ T Sbjct 142 PQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQST---- 197 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 198 --QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKL---- 250 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 251 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 275 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD +R ++ F+ G R LI TD+ ARGI Sbjct 276 DWLTDKLT---------ARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGI 326 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 327 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 381 Query 640 NTRLKE 645 +T+++E Sbjct 382 STQIEE 387 Score = 96.7 bits (239), Expect = 4e-20, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 0/79 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F EM + E+ + + + P+ IQ +I ++ G DV+ A++G+GKT FSI V Sbjct 22 VDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISV 81 Query 61 IQIVYETLKDQQEGKKGKT 79 +Q + +K Q T Sbjct 82 LQKIDTNVKQCQALILAPT 100 >sp|Q12S35|RHLB_SHEDO ATP-dependent RNA helicase RhlB OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) OX=318161 GN=rhlB PE=3 SV=1 Length=432 Score = 302 bits (772), Expect = 7e-94, Method: Composition-based stats. Identities = 111/454 (24%), Positives = 185/454 (41%), Gaps = 63/454 (14%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 ++ DL L E+ + ++ L + K K Sbjct 8 TQRFADLPLHAEVIQALNENGFEFCTPIQALSLPVLL---KAKDIAGQAQTGTGKTMAFL 64 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + H Q + L N P+A+I+ P+RELA Q + K+ L+ ++ G Sbjct 65 VATFNHLLTTPAPQAREL-NQPRAIIMAPTRELAIQIAKDANLLAKHTG---LKVGIVYG 120 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + Q VL+ GVDI++GT GR+ D V G ++L+ ++ +VLDEAD + G+ I Sbjct 121 GESYEVQREVLDKGVDILIGTTGRIIDYVRQGVISLNSIQAVVLDEADRMFDLGFIKDIR 180 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HV 444 + ++P +S ++ SATL S V++L+ M+ P V++ E+ + + Sbjct 181 FLFRRMPDASS----RLNMLFSATL-SMKVQELAYDHMNDPEKVEVTPEEKTSKNIKEEI 235 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 P RL + ++E Sbjct 236 FYPSTEDKMRL-----------------------------------------LLTLMEED 254 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 ++AI+F TK C+NL + +G L GD +R + LE+F G Sbjct 255 WPEKAIVFSNTKHSCENLWSWL---------EGDGHRVGLLTGDVPQKKRIRILEQFTSG 305 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 D+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G+++S Sbjct 306 DLDVLVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACETYA 365 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + G +R + +++ Sbjct 366 LNLPAIEQYIGHSVPVSRYDREALLDDIPTPVKI 399 Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats. Identities = 60/353 (17%), Positives = 117/353 (33%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + E+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHAEVIQALNENGFEFCTPIQALSLPVLLKAKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T Q ++ + + + + + GL Sbjct 71 LLTTPAPQ--ARELNQPRAIIMAPTRELAIQI-AKDANLLAKHTGLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G YEV D+G+ + +GT + G S N Sbjct 116 ---GIVYGGESYEVQREVLDKGV----------DILIGTTGRIIDYVRQGVISLN----- 157 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMK---NQALFPACVLKNAE 237 + +D+ F KD+ F P N +K E Sbjct 158 ---SIQA-------VVLDEADRMFDLGFIKDIRFLFRRMPDASSRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ + K + S + KA++ ++ Sbjct 208 LAYDHMNDPEKVEVTPEEKTSKNIKEEIFYPSTEDKMRLLLTLMEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +D++V T Sbjct 267 ------HSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGDLDVLVAT 313 >sp|Q1DQ20|IF4A_COCIM ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis (strain RS) OX=246410 GN=TIF1 PE=3 SV=1 Length=398 Score = 300 bits (769), Expect = 9e-94, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 187/426 (44%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F A L+ L+ + +G E + + + K D +G + + + Sbjct 27 FDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQK 86 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 A +ALI+ P+RELA+Q + ++ + IGG R+ + L +G Sbjct 87 VDTNLKACQALILAPTRELAQQIQKVVVAIGDFMS---VECHACIGGTNVREDIKALNDG 143 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VVGTPGR+ D++ L Q++ VLDEAD +LS+G+++ I + +PQ T Sbjct 144 PQVVVGTPGRVHDMIQRRVLKTDQMKMFVLDEADEMLSRGFTEQIYDIFQFLPQST---- 199 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV ++ K M P + +K + + + + V + +L Sbjct 200 --QVVLLSATMP-QDVLDVTTKFMRDPVRILVKKAELTLEGIKQFYIAVEKEEWKL---- 252 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 253 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 277 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L I F+ +HG+ + ++R ++ F+ G R LI TD+ ARGI Sbjct 278 DWLTDKLI---------ARDFTVSAMHGEMEQNQRDVIMKEFRSGSSRVLIATDLLARGI 328 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 329 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 383 Query 640 NTRLKE 645 +T+++E Sbjct 384 STQIEE 389 Score = 91.0 bits (224), Expect = 4e-18, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 39/77 (51%), Gaps = 0/77 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + E+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLKDQQEGKKGKT 79 V LK Q T Sbjct 86 KVDTNLKACQALILAPT 102 >sp|Q4L7W0|CSHA_STAHJ DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=cshA PE=3 SV=1 Length=503 Score = 304 bits (778), Expect = 9e-94, Method: Composition-based stats. Identities = 110/530 (21%), Positives = 207/530 (39%), Gaps = 92/530 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ + ++ ++ + + + ++ G Sbjct 3 NFKELGISDKTVETLEAMGFKEPTPIQKDSIPYTL--------EGKDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + + + +ALI+ P+RELA Q +++F + ++ + + GG+ Sbjct 55 AF----GIPLIEKVVGQSGVQALILAPTRELAMQVAEQLREFSR---GQNVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + + L+LDEAD +++ G+ D + + Sbjct 108 PIDRQIKALKRGPQIVVGTPGRVIDHLNRRTLKTNGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP ++ Q ++ SAT+ ++ L ++ M P V + + Sbjct 168 MDKIP-----AEQRQTMLFSATMPKA-IQTLVQQFMKSPQIVKTMNNEMSDPQIDEYYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L + +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALLSKG---------YKAEGLHGDITQAKRLEVLKKFKNDQID 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + S G+ R H + E DIK V + + Sbjct 353 RQIEDSNGRRMNALR--------------------PPHRKEVLKAREDDIKDKVKNWMSR 392 Query 688 VTYGQKRAAGGGSYKGHV--DILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 + + + + + +++A +QEL E + L + Sbjct 393 ESEARLKRISSELLEEYDSTELVASLLQELVEANDEVEVQLTFEKPLARK 442 Score = 101 bits (252), Expect = 2e-21, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 55/108 (51%), Gaps = 12/108 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + + +E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDKTVETLEAMGFKEPTPIQKDSIPYTLEGKDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGAS-VLNKWQMNPYDRGSAFAIGSD 107 I+ V G++ ++ + M ++ F+ G + Sbjct 61 IEKVV-----------GQSGVQALILAPTRELAMQVAEQLREFSRGQN 97 >sp|P57453|DEAD_BUCAI ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=deaD PE=3 SV=1 Length=601 Score = 307 bits (785), Expect = 1e-93, Method: Composition-based stats. Identities = 112/469 (24%), Positives = 185/469 (39%), Gaps = 77/469 (16%) Query 200 KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 + F LGL I + ++ + + + ++ Sbjct 5 ESTFSF------LGLNPFIIQSLNEMGYVKPSPIQASCIPLLL--------EGRDVLGMA 50 Query 260 KAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 + G + AP+ L++ P+RELA Q F KY+ + Sbjct 51 QTGSGKTAAFSL---PLLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYM--IGIH 105 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG 379 L + GG QL L G IVVGTPGRL D + G LNLS + LVLDEAD +L G Sbjct 106 VLPLYGGQRYELQLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNLHGLVLDEADEMLRMG 165 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + + + + QIP K Q + SAT+ ++++S++ M P + ++ + Sbjct 166 FIEDVETIMAQIP------KEHQTALFSATMPEA-IRRISKRFMRNPKEIKIQSNITTRP 218 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + V + K + +R Sbjct 219 DIKQSYWMVYGR-----------------------------------------KTDALIR 237 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 ++ IIF RTK + + + G ++ L+GD R+Q LE Sbjct 238 FLEAEDFSATIIFVRTKNATLEVSEALERNG---------YNSAALNGDMNQALREQTLE 288 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 R K G + LI TDVAARG+D+ + +VIN +P + ++YVHRIGR GRA R G A+ V Sbjct 289 RLKNGRLDILIATDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFV 348 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 + ++ ++ + + +L + E Q ++++ L Sbjct 349 ENRERRLLRNIERTMKQSIPEVQLPKVELLCQRRLE-QFAKKVQQQLES 396 Score = 109 bits (272), Expect = 2e-23, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 57/108 (53%), Gaps = 9/108 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + FS +G+ P I Q++ EM ++ P+ IQA IPL+L G DVL A+TGSGKT AFS+P++ Sbjct 6 STFSFLGLNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLL 65 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + LK Q + + + + S F+ G+ Sbjct 66 HNLNINLKAPQ---------ILVLAPTRELAVQVAEAFSDFSKYMIGI 104 >sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=prp5 PE=3 SV=1 Length=1173 Score = 319 bits (818), Expect = 1e-93, Method: Composition-based stats. Identities = 104/492 (21%), Positives = 198/492 (40%), Gaps = 98/492 (20%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 GL + + ++ + + ++K G + Sbjct 547 GLGIQTLDVIDKLGFASLTSIQAQAIPAIMS--------GRDVIGVAKTGSGKTMAFLIP 598 Query 273 GNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + L N P LI+ P+RELA Q + K F K ++ LR + GG + Sbjct 599 MFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIK 655 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 DQ++ L+ G +I+V TPGR+ DL++ NL +V ++VLDEAD + G+ + ++ Sbjct 656 DQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 715 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + Q ++ SAT +++ L+ K + P + + G V + +V Sbjct 716 LSNV------RPDRQTVLFSATFP-RNMEALARKTLTKPIEIVVGGRSVVAPEITQIVEV 768 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 N + + +++L+ + + E++ Sbjct 769 CNEE----------------------------------KKFVRLLELLGNLYSTDENEDA 794 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +++IF + D L + +++G + C+ +HG + +R +E FK G Sbjct 795 RSLIFVDRQEAADTLLRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFP 845 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 LI T VAARG+D+ + V+N P+ ++YVHR GR GRA G A++ + ++E+ Sbjct 846 VLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYS 905 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + L + +V ++ VD F K Sbjct 906 VDIAKA--------------------------------LKQSGQEVPEAVQKLVDSFLEK 933 Query 688 VTYGQKRAAGGG 699 V G+++A+ G Sbjct 934 VKAGKEKASNSG 945 Score = 103 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 27/97 (28%), Positives = 51/97 (53%), Gaps = 4/97 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ + ++++ + T IQA++IP I+ G DV+ A+TGSGKT AF IP+ Sbjct 540 VQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPM 599 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD 97 + + KDQ+ + + I + + + Sbjct 600 FRHI----KDQRPLENMEGPIGLIMTPTRELATQIHK 632 >sp|A3LS22|RRP3_PICST ATP-dependent rRNA helicase RRP3 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=RRP3 PE=3 SV=3 Length=484 Score = 303 bits (775), Expect = 1e-93, Method: Composition-based stats. Identities = 105/442 (24%), Positives = 171/442 (39%), Gaps = 74/442 (17%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 VKFS +L L E+ ++ +++ + + L Sbjct 64 PDDEVKFST-FSELKLVPELLEAIQQMKFSKPTPIQSEAIPHAL--------EGKDIIGL 114 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 ++ G + Q+ + P L++ P+RELA Q + Sbjct 115 AQTGSGKTAAFAIP----ILQSLWEAQTPYFGLVLAPARELAYQIKETFDALGSTMG--- 167 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLL 376 +R + ++GG+ DQ L I++ TPGR+ D + T +L +++ V+DEAD LL Sbjct 168 VRTVCLVGGMDMMDQARDLMRKPHIIIATPGRIMDHLEHTKGFSLKMLKYFVMDEADKLL 227 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 + ++++ QIP + + SAT+ + ++KL +H P V + + Sbjct 228 DLEFGPVLDKILKQIP------SKRTTYLFSATMTN-KIEKLQRASLHNPVRVAVSSKYQ 280 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 D + ++ V+ K Y Sbjct 281 TADNLIQSMMLVS----------------------------------------DGYKNTY 300 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 + + E IIF RT+ G FS V LHGD +R Sbjct 301 LIHLLNEFVGKSIIIFARTRAHTQRTSILCRILG---------FSAVPLHGDLTQAQRLG 351 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 +L +FK G LI TDVAARG+DI V VIN +P + + YVHR+GR RA R G +I Sbjct 352 SLNKFKSGTANILIATDVAARGLDIPSVDVVINYDIPTDSKAYVHRVGRTARAGRSGKSI 411 Query 617 SLVATEKEKVWYHVCSSRGKGC 638 SLV +++ + S K Sbjct 412 SLVTQYDLEMYLRIEQSIQKKL 433 Score = 109 bits (273), Expect = 6e-24, Method: Composition-based stats. Identities = 30/65 (46%), Positives = 50/65 (77%), Gaps = 0/65 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + FSE+ ++PE+ +A+++M + PT IQ+E+IP L G D++ A+TGSGKT AF+IP++ Sbjct 71 STFSELKLVPELLEAIQQMKFSKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPIL 130 Query 62 QIVYE 66 Q ++E Sbjct 131 QSLWE 135 >sp|Q6CZD9|RHLB_PECAS ATP-dependent RNA helicase RhlB OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=rhlB PE=3 SV=3 Length=430 Score = 301 bits (771), Expect = 1e-93, Method: Composition-based stats. Identities = 114/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++++ ++ L ++ G + Sbjct 13 DFALHPQVIEALESKGFHYCTPIQALALPLTLS--------GRDVAGQAQTGTGKTLAFL 64 Query 271 HSG----NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q ++ + L+ L GG Sbjct 65 ASTFHYLLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEALSHLTG---LKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLENGVDI+VGT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLENGVDILVGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHVV 445 + ++P + + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPATS----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRITEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L ++E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------LEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+ IIF TK C+++ + G L GD +R + LE F +G Sbjct 256 PDRCIIFANTKHRCEDVWGHLAADG---------HRVGLLTGDVAQKKRLRILEEFTQGS 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G +ISL E Sbjct 307 IDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGQSGFSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G G ++ D +L Sbjct 367 NLPAIETYIGHGIPLSKYNSDALMNDLPAPKRL 399 Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats. Identities = 56/355 (16%), Positives = 118/355 (33%), Gaps = 64/355 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVIEALESKGFHYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + + ++ + + + + + + G + Sbjct 71 LLSHPANAE--RQTNQPRALIMAPTRELAVQIH--------------SDAEALSHLTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLENGV----------DILVGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAFEIPPHMKNQ--ALFPACVLKNAE 237 ++ + LD + F K+ + L F P + LF A L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPATSQRLNMLFSAT-LSYRV 205 Query 238 LKFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPS 295 + F + ++ + + + ++ QT P + +I + Sbjct 206 RELAFEQMNNAEYVEVEPEQKTGHRITEELFYPSNEEKMRLLQTLLEEEWPDRCIIFANT 265 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + + ++ R L+ G VA + +L +LE +DI+V T Sbjct 266 K-------HRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILEEFTQGSIDILVAT 313 >sp|A5DQF1|RRP3_PICGU ATP-dependent rRNA helicase RRP3 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=RRP3 PE=3 SV=2 Length=475 Score = 302 bits (774), Expect = 1e-93, Method: Composition-based stats. Identities = 107/460 (23%), Positives = 170/460 (37%), Gaps = 71/460 (15%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIV---KSQHSGNAQVTQTKFLP------NA 286 EL + ++ P A+ A +G + SG L Sbjct 73 PELMEAIEKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFAIPILQSLWEAQRP 132 Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 AL++ P+RELA Q +R + I+GG+ DQ L I+V T Sbjct 133 YYALVLAPTRELAYQIKETFDALG---SGMGVRSVCIVGGMDMMDQARDLMRKPHILVAT 189 Query 347 PGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 PGR+ D + +T +L +++LV+DEAD LL + ++++ IP + + Sbjct 190 PGRIMDHLENTKGFSLKSLQYLVMDEADRLLDMDFGPALDKILKVIPT------KRTTYL 243 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ + + KL +H P V + + D + ++ V+ Sbjct 244 FSATMTN-KIAKLQRASLHEPVKVAVSNKYQTADNLVQSMMLVS---------------- 286 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 K + + + E I+F RT Sbjct 287 ------------------------DGYKNTFLIHLLNEFMGKSIIVFTRTCAHTQR---- 318 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + FS V LHG +R +L +FK G LI TDVAARG+DI V Sbjct 319 -----STLLARILGFSAVPLHGQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVD 373 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN +P + + Y+HR+GR RA + G +ISLV +++ + S G Sbjct 374 VVINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLEMYLRIESVLGFKLPKDPSPP 433 Query 646 DGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + + S E + T E K D+ D Sbjct 434 RDVLNALHVHVDRAS--AEAIKQTKDFHEKRTKKKRDDRD 471 Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats. Identities = 31/105 (30%), Positives = 54/105 (51%), Gaps = 9/105 (9%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FSE+ ++PE+ +A+E++ + PT IQ+ +IP L G D++ A+TGSGKT AF+IP++Q Sbjct 65 TFSELNLVPELMEAIEKLKYTKPTPIQSGAIPHALEGKDIIGLAQTGSGKTAAFAIPILQ 124 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 ++E + + + + A G Sbjct 125 SLWEAQRP---------YYALVLAPTRELAYQIKETFDALGSGMG 160 >sp|Q88NB7|RHLB_PSEPK ATP-dependent RNA helicase RhlB OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=rhlB PE=3 SV=1 Length=398 Score = 300 bits (767), Expect = 2e-93, Method: Composition-based stats. Identities = 110/448 (25%), Positives = 186/448 (42%), Gaps = 74/448 (17%) Query 195 YLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG 254 ++ +G +F D L+ E+ + + ++ L + ++ Sbjct 1 MVEPQEGKTRF----HDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQD-------- 48 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFK 310 + ++ G S +Q+ QT P+ALI+ P+REL Q + Sbjct 49 AIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALT 108 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 KY L + +GG+ QL LE DI+V TPGRL D G+++L V +VL Sbjct 109 KYTG---LNVMSFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVL 165 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD +L G+ + ++ Q P Q ++ SAT DV L+++ P V Sbjct 166 DEADRMLDMGFIPQVRQIIRQTP----PKSERQTLLFSATFTD-DVMNLAKQWTTNPAIV 220 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 +++ E+ +TV V V Sbjct 221 EIEPENVASETVEQHVYAVAGSD------------------------------------- 243 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K + + ++K ++ ++F K + +E+ ++ G + L GD Sbjct 244 ---KYKLLYNLVTQNKWERVMVFANRKDEVRRIEEKLVRDG---------INAAQLSGDV 291 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 H+R + LE F++G + L+ TDVA RGI I G+ +VIN TLP++ +YVHRIGR GRA Sbjct 292 PQHKRIRTLESFREGRITVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRA 351 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKG 637 G++IS + + + G+ Sbjct 352 GTSGVSISFAGEDDSYQLPAIEALLGRK 379 Score = 88.3 bits (217), Expect = 3e-17, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 42/94 (45%), Gaps = 2/94 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ A+ ++ + T IQA+ + L G D + A+TG+GKT AF I +I Sbjct 9 TRFHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISII 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 + +T ++ + + + + Sbjct 69 SQLQQTPPPKE--RYMGEPRALIIAPTRELVVQI 100 >sp|Q54CE0|DDX17_DICDI Probable ATP-dependent RNA helicase ddx17 OS=Dictyostelium discoideum OX=44689 GN=ddx17 PE=3 SV=1 Length=785 Score = 311 bits (796), Expect = 2e-93, Method: Composition-based stats. Identities = 102/400 (26%), Positives = 174/400 (44%), Gaps = 69/400 (17%) Query 252 KDGFVALSKAPDG----YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIK 307 + L+K G +++ S NAQ + + P L++ P+RELA Q Sbjct 421 GRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLRE--DDGPIVLVLAPTRELALQIQEETN 478 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 +F ++ + GG + Q++ L+ GV+IV+ TPGRL D++ +GK NL +V +L Sbjct 479 KFG---GTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYL 535 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDEAD +L G+ I ++ +QI Q ++ SAT +V+ L+ + Sbjct 536 VLDEADRMLDMGFEPQIRKIISQI------RPDRQTLMFSATWPK-EVQALAHDFLTDHI 588 Query 428 WVDLKG-EDSVPDTVHHVVVPVN--PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 V + E + V +V K +R+ LG Sbjct 589 QVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSV---------------------- 626 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 + ++ I+F T+ D+L++ G F + Sbjct 627 -------------------GRDEKVIVFAETRKGVDDLQRVLQFSG---------FKSIG 658 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +HG++ ER L +FK G V +I TDVA+RG+DI + YV+N P+ + Y+HRIG Sbjct 659 IHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIG 718 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 R RA G++ SL+ T+ ++ + + ++ Sbjct 719 RTARAGASGVSYSLLTTDNARLANELIKVLTEAKQKIPIE 758 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 54/374 (14%), Positives = 123/374 (33%), Gaps = 60/374 (16%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F++ + + + + PT IQ+++ P+ L G D++ A+TGSGKT AF +P Sbjct 383 IMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPS 442 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS--DGLCCQSREVKE 118 I + Q ++ I + + + + + F S C K Sbjct 443 IVHI----NAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKH 498 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQ 178 KG+ E+ G R+ +L + + + + Sbjct 499 TQVAALKKGV-------EIVIATPG--RLIDILESGKTNL--RRVTYLVLDEADRMLDMG 547 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAEL 238 F+ + + D+ + FS + + + L + Sbjct 548 FEPQIRKIISQ------IRPDRQTLMFSA------TWPKEVQALAHDFLTDHIQVHIGST 595 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 + V + + + ++ + K ++ +R Sbjct 596 EITANHN------VRQIVEVCQDFEKK--------ERMLSFLGSVGRDEKVIVFAETR-- 639 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ---LSVLENG-VDIVVGTPGRLDDLV 354 + ++ + + + I G + ++ LS +NG V I++ T D+ Sbjct 640 -----KGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIAT-----DVA 689 Query 355 STGKLNLSQVRFLV 368 S G L++ ++++V Sbjct 690 SRG-LDIKDIKYVV 702 >sp|Q0CXD0|IF4A_ASPTN ATP-dependent RNA helicase eIF4A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=tif1 PE=3 SV=2 Length=396 Score = 299 bits (766), Expect = 2e-93, Method: Composition-based stats. Identities = 115/426 (27%), Positives = 189/426 (44%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F + LK L+ + +G E + + + K D +G + + + Sbjct 25 FDSMELKAELLRGVYAYGFERPSAIQQRAIMPIIKGNDVIAQAQSGTGKTATFSISALQK 84 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 A +ALIV P+RELA+Q + +++ + IGG A RD + L+ G Sbjct 85 IDPNLKACQALIVAPTRELAQQIQKVVVAIGDFMN---INCHACIGGTAIRDDMKALQEG 141 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVVGTPGR+ D++ L Q++ +LDEAD +LS+G+++ I + +PQ T Sbjct 142 PPIVVGTPGRIQDMIQRRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQAT---- 197 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 198 --QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKL---- 250 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 251 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 275 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD + +R ++ F+ G R LI TD+ ARGI Sbjct 276 DWLTDKLT---------ARDFTVSAMHGDMEQSQRDIIMKEFRSGSSRVLIATDLLARGI 326 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 327 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 381 Query 640 NTRLKE 645 +T+++E Sbjct 382 STQIEE 387 Score = 92.1 bits (227), Expect = 1e-18, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + E+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 24 SFDSMELKAELLRGVYAYGFERPSAIQQRAIMPIIKGNDVIAQAQSGTGKTATFSISALQ 83 Query 63 IVYETLKDQQ 72 + LK Q Sbjct 84 KIDPNLKACQ 93 >sp|C6DHF5|RHLB_PECCP ATP-dependent RNA helicase RhlB OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=rhlB PE=3 SV=1 Length=430 Score = 300 bits (768), Expect = 2e-93, Method: Composition-based stats. Identities = 112/453 (25%), Positives = 185/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++++ ++ L ++ G + Sbjct 13 DFALHPQVIEALESKGFHNCTPIQALALPLALS--------GRDVAGQAQTGTGKTLAFL 64 Query 271 HSG----NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q ++ + L+ L GG Sbjct 65 ASTFHYLLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEALSHLTG---LKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLENGVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLENGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L ++E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------LEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+ IIF TK C+++ + G L GD +R + LE F +G+ Sbjct 256 PDRCIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILEEFTQGN 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G +ISL E Sbjct 307 LDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGQSGFSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D +L Sbjct 367 NLPAIETYIGHSIPVSKYNSDALMNDLPAPKRL 399 Score = 102 bits (255), Expect = 6e-22, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVIEALESKGFHNCTPIQALALPLALSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + + ++ + + + + + + G + Sbjct 71 LLSHPANAE--RQTNQPRALIMAPTRELAVQIH--------------SDAEALSHLTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLENGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P + +I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLLEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ R L+ G VA + +L +LE +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILEEFTQGNLDILVAT 313 >sp|A1CJT5|IF4A_ASPCL ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=tif1 PE=3 SV=1 Length=398 Score = 299 bits (765), Expect = 3e-93, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 188/426 (44%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F + LK L+ + +G E + + + K D +G + + + Sbjct 27 FDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQK 86 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 A +ALI+ P+RELA+Q + ++ L IGG R+ + L++G Sbjct 87 IDPNLKACQALILAPTRELAQQIQKVVVAIGDFMS---LECHACIGGTNVREDMKALQDG 143 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VVGTPGR+ D++ L Q++ +LDEAD +LS+G+++ I + +PQ T Sbjct 144 PQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQST---- 199 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 200 --QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKL---- 252 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 253 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 277 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD + +R ++ F+ G R LI TD+ ARGI Sbjct 278 DWLTDKLT---------ARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGI 328 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 329 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 383 Query 640 NTRLKE 645 +T+++E Sbjct 384 STQIEE 389 Score = 96.4 bits (238), Expect = 6e-20, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 40/77 (52%), Gaps = 0/77 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + + + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLKDQQEGKKGKT 79 + LK Q T Sbjct 86 KIDPNLKACQALILAPT 102 >sp|Q10202|DBP3_SCHPO ATP-dependent RNA helicase dbp3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp3 PE=3 SV=1 Length=578 Score = 305 bits (781), Expect = 3e-93, Method: Composition-based stats. Identities = 102/388 (26%), Positives = 167/388 (43%), Gaps = 55/388 (14%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 V +++ G V + + P+ L+V P+RELA QT N+ Sbjct 202 GRDVVGIAETGSGKTVAFGIPALQYLNGLSDNKSVPRVLVVSPTRELAIQTYENLNSL-- 259 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 I L+ +++ GG +Q +N +++GTPGRL DL++ G ++ SQV +LVLDE Sbjct 260 -IQGTNLKAVVVYGGAPKSEQARAAKN-ASVIIGTPGRLLDLINDGSIDCSQVGYLVLDE 317 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD +L G+ I + + P T +G Q + SAT V+ L+ + P + + Sbjct 318 ADRMLDTGFEQDIRNIISHTPDPTRNGS-RQTVFFSATWP-ESVRALAATFLKDPVKITI 375 Query 432 KGED-SVPDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 ++ + + +V ++ +R+ + L + H+ + Sbjct 376 GSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGG-------------------- 415 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K D+ +IF K + +E +++ V +HGD Sbjct 416 ----------------KDDKILIFVLYKKEAARVEGTL----------ARKYNVVGIHGD 449 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 R Q L FK G L+ TDVAARG+DI V VINVT P ++YVHRIGR GR Sbjct 450 MSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGR 509 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGK 636 A G AI+ + + + + + Sbjct 510 ANTKGTAITFFTPQDKSHAGELVNVLRQ 537 Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 18/139 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E+ V ++ + ++ ++ PT IQA + P +L G DV+ AETGSGKT AF IP Sbjct 166 ILQFDELDVSAKLREGLK--NYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPA 223 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 +Q + ++ S + + Y+ ++ G++ Sbjct 224 LQYLNGLSDNK------SVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKS 277 Query 112 -QSREVKEWHGCRATKGLM 129 Q+R K T G + Sbjct 278 EQARAAKNASVIIGTPGRL 296 >sp|Q0ILZ4|RH9_ORYSJ DEAD-box ATP-dependent RNA helicase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0611200 PE=2 SV=1 Length=628 Score = 306 bits (784), Expect = 3e-93, Method: Composition-based stats. Identities = 118/433 (27%), Positives = 198/433 (46%), Gaps = 71/433 (16%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 LG++ +I + ++ + ++ A L+ V +K G + Sbjct 103 LGISPKIVSQLASRGITKLFPIQRAVLE--------PAMQGKDMVGRAKTGTGKTLAFGI 154 Query 272 SGNAQVTQTKFLPNA---PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + P A+++ P+RELA+Q + D+ + + + GG Sbjct 155 PILDAIIRHNEKNSPGKFPLAIVLAPTRELAKQVERE------FSDSSNVETICVYGGTP 208 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L GVD+V+GTPGR+ DL+ G LNLS+VRF+VLDEAD +LS G+ + + + Sbjct 209 ISQQIRQLNYGVDVVIGTPGRVIDLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETIL 268 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +++P + Q ++ SAT+ ++ +++L++K + P +DL GED Sbjct 269 DRVP------PKRQTLMFSATMPTW-IQRLTQKYLKNPVTIDLVGED------------- 308 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 +L E + I ++ G P + E IK + K + Sbjct 309 ---DQKLAEGISLYSIASE----------GHAKPAVLGELIK-----------EHAKGGK 344 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 I+F +TK D D L G F C LHGD +R++ L+ F++G Sbjct 345 CIVFTQTKRDADRLSYTM----------GRSFQCQALHGDITQAQRERTLKGFREGHFNI 394 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 LI TDVAARG+DI V VI+ LP+ + +VHR GR GRA + G AI + + ++ + Sbjct 395 LIATDVAARGLDIPNVDLVIHFELPNSSELFVHRSGRTGRAGKKGKAIVMHSYQQSRAIR 454 Query 629 HVCSSRGKGCYNT 641 V + G Sbjct 455 MVENDVGCKFTEL 467 Score = 85.2 bits (209), Expect = 8e-16, Method: Composition-based stats. Identities = 53/346 (15%), Positives = 105/346 (30%), Gaps = 56/346 (16%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 +G+ P+I + IQ + + G D++ A+TG+GKT AF IP++ + Sbjct 103 LGISPKIVSQLASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIR 162 Query 67 TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATK 126 + GK + + + S + + +C + Sbjct 163 HNEKNSPGKFPLAIV---LAPTRELAKQVEREFSD-SSNVETICVYGGTPISQQIRQLNY 218 Query 127 GLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEF 186 G+ +V G RV + +L+L + F + + FD Sbjct 219 GV-------DVVIGTPG--RVIDLLKRGALNL--SEVRFVVLDEADQMLSVGFD------ 261 Query 187 TMHDTIGCYLDID--KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGE 244 D + + + FS P + LKN GE Sbjct 262 --EDVETILDRVPPKRQTLMFS----------ATMPTWIQRLTQKY--LKNPVTIDLVGE 307 Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLN 304 ++ K L++ Y + S+ V +A + + QT Sbjct 308 DDQK---------LAEGISLYSIASEGHAKPAVLGELIKEHAKGGKCIVFT-----QTKR 353 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE----NGVDIVVGT 346 + + Y + + G + + L+ +I++ T Sbjct 354 DADRLS-YTMGRSFQCQALHGDITQAQRERTLKGFREGHFNILIAT 398 >sp|Q4WT99|PRP5_ASPFU Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=prp5 PE=3 SV=1 Length=1211 Score = 318 bits (816), Expect = 3e-93, Method: Composition-based stats. Identities = 112/510 (22%), Positives = 207/510 (41%), Gaps = 102/510 (20%) Query 195 YLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG 254 +D+ K +K+S GL + ++ +++ + Sbjct 567 GVDVPKPVMKWS----QCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMS--------GRD 614 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKY 312 + ++K G + + + L N P LI+ P+RELA Q + K F K Sbjct 615 VIGVAKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKA 674 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVL 369 ++ LR + GG +DQ++ L+ G +IVV TPGR+ DL++ NL +V ++VL Sbjct 675 LN---LRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVL 731 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD + G+ + ++ I Q ++ SAT +++ L+ K + P + Sbjct 732 DEADRMFDMGFEPQVMKIMANI------RPDRQTVLFSATFP-RNMEALARKSLTKPIEI 784 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + G+ V + +V N T + + Sbjct 785 VVGGKSVVAPEITQIVEVRNEDT----------------------------------KFV 810 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 ++L+ + + ++ +A+IF + D L + +++G + C+ +HG + Sbjct 811 RLLEILGNLYSDDANEDARALIFVDRQEAADTLLRELMRKG---------YPCMSIHGGK 861 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 +R +E FK G LI T VAARG+D+ + V+N P+ ++YVHR GR GRA Sbjct 862 DQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRA 921 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT 669 G A++ + E+E+ + + L + Sbjct 922 GNTGTAVTFLTEEQERYSVDIAKA--------------------------------LRQS 949 Query 670 ISQVEPDIKVPVDEFDGKVTYGQKRAAGGG 699 +V ++ VD F KV G+++A+ G Sbjct 950 GQKVPEPVQKMVDSFLEKVKAGKEKASASG 979 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 26/97 (27%), Positives = 52/97 (54%), Gaps = 4/97 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ + ++++ + PT IQ+++IP I+ G DV+ A+TGSGKT AF IP+ Sbjct 574 VMKWSQCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPM 633 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD 97 + + +DQ+ + + I + + + Sbjct 634 FRHI----RDQRPLENMEGPIGLIMTPTRELATQIHK 666 >sp|B1KQF6|RHLB_SHEWM ATP-dependent RNA helicase RhlB OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=rhlB PE=3 SV=1 Length=441 Score = 300 bits (769), Expect = 3e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 187/453 (41%), Gaps = 73/453 (16%) Query 221 HMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL----------SKAPDGYIVKSQ 270 H+ NQ + K + N EF P + + + ++ G + Sbjct 5 HLSNQKFADFSLNKEIKTALNESGFEFCTPIQALSLPILLQKKDIAGQAQTGTGKTLAFL 64 Query 271 HSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + + T N P+A+I+ P+RELA Q + K+ L+ ++ GG Sbjct 65 VATFDHLLSTPVPEGRQLNQPRAMIMAPTRELAIQIAKDATLLAKHTG---LKVGIVYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + Q VL+ GVDI++GT GR+ D V G +NLS ++ +VLDEAD + G+ I Sbjct 122 ESYDVQRKVLDKGVDILIGTTGRIIDYVRQGIINLSAIQAVVLDEADRMFDLGFIKDIRF 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P D K ++ SATL S V++L+ M+ P V + + + + Sbjct 182 LFRRMP----DAKSRLNMLFSATL-SMKVQELAYDHMNEPEKVVIAPNEKTSKNIKEEIF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P + RL + I+E Sbjct 237 YPSMDEKMRL-----------------------------------------LLSLIEEDW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 ++AI+F TK C+N+ + +G L GD +R + LE+F +G Sbjct 256 PEKAIVFSNTKHSCENVWSWL---------EGDGHRVGLLTGDVPQKKRIRILEQFTEGK 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G+++S E Sbjct 307 LDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGKKGVSVSFACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + T +G +++ Sbjct 367 NLPAIEEYITHSIPVTNYDSEGLLDDIPAPIRV 399 Score = 101 bits (252), Expect = 2e-21, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 120/353 (34%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ + EI A+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFSLNKEIKTALNESGFEFCTPIQALSLPILLQKKDIAGQAQTGTGKTLAFLVATFDH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG++ + + + + + GL Sbjct 71 LLSTP--VPEGRQLNQPRAMIMAPTRELAIQI-AKDATLLAKHTGLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V D+G+ + +GT + + Sbjct 116 ---GIVYGGESYDVQRKVLDKGV----------DILIGTT---------------GRIID 147 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMK---NQALFPACVLKNAE 237 Y + ++ + + +D+ F KD+ F P K N +K E Sbjct 148 YVRQGIINLSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ E K + S + KA++ ++ Sbjct 208 LAYDHMNEPEKVVIAPNEKTSKNIKEEIFYPSMDEKMRLLLSLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCENVWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTEGKLDILVAT 313 >sp|Q755A5|DBP3_EREGS ATP-dependent RNA helicase DBP3 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP3 PE=3 SV=1 Length=535 Score = 303 bits (777), Expect = 3e-93, Method: Composition-based stats. Identities = 121/487 (25%), Positives = 196/487 (40%), Gaps = 86/487 (18%) Query 204 KFSKNGKDLGLAFEIPPHMKNQALFPACVLK-NAELKFNFGEEEFKFPPK---------- 252 FS+N +A E P + + L L ++ ++ + P + Sbjct 105 FFSEN----EVAVEDPESLGFRPLLSFSHLNLHSAIQKEISKFPKPTPIQAVSWPYLLAG 160 Query 253 DGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 + +++ G + K P K L++ P+RELA Q +N+ Q Sbjct 161 KDVIGVAETGSGKTFAFGVPAINSLMSEKSTPRGVKCLVISPTRELASQIYDNLVQL--- 217 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 D L + GGV Q L+ +VV TPGRL DL+ G L+ V++LVLDEA Sbjct 218 TDKVGLNCCCVYGGVQKDSQREQLKK-AQVVVATPGRLLDLIEEGSAKLAGVQYLVLDEA 276 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L +G+ + I R+ + + Q ++ +AT +V++L+ M P V + Sbjct 277 DRMLEKGFEEDIKRIIKE-----TKSDVRQTLMFTATWPK-EVRELASTFMRAPVKVSIG 330 Query 433 GED--SVPDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 D S + VV ++P K RL E L + Sbjct 331 NRDELSANKRITQVVEVIDPFKKEKRLLELLKQYQSGAK--------------------- 369 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K D+ +IF K + +E+ G ++ +HGD Sbjct 370 ----------------KNDKVLIFALYKKEASRVERNLKYNG---------YNVAAIHGD 404 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +R Q L FK G L+ TDVAARG+DI V VIN+T P ++YVHRIGR GR Sbjct 405 LSQQQRTQALSEFKAGTANLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGR 464 Query 609 AERMGLAISLVATEKEKVWYHVCSSRG-----------KGCYNTRLKEDGGCTIWYNEMQ 657 A G+A +L +++ + + + K +T+ KE +Y + Sbjct 465 AGATGVAHTLFTEQEKHLAGALVNVLNGAGQPVPEELMKFGTHTKRKEHNAYGAFYKNVD 524 Query 658 LLSEIEE 664 L + ++ Sbjct 525 LTKKAKK 531 Score = 99.0 bits (245), Expect = 2e-20, Method: Composition-based stats. Identities = 37/139 (27%), Positives = 55/139 (40%), Gaps = 18/139 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS + + I + + + + PT IQA S P +L G DV+ AETGSGKT AF +P Sbjct 124 LLSFSHLNLHSAIQKEISK--FPKPTPIQAVSWPYLLAGKDVIGVAETGSGKTFAFGVPA 181 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC-------- 111 I + E + S + YD CC Sbjct 182 INSLMS------EKSTPRGVKCLVISPTRELASQIYDNLVQLTDKVGLNCCCVYGGVQKD 235 Query 112 -QSREVKEWHGCRATKGLM 129 Q ++K+ AT G + Sbjct 236 SQREQLKKAQVVVATPGRL 254 >sp|Q5AAW3|DHH1_CANAL ATP-dependent RNA helicase DHH1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DHH1 PE=3 SV=1 Length=549 Score = 304 bits (778), Expect = 3e-93, Method: Composition-based stats. Identities = 112/498 (22%), Positives = 188/498 (38%), Gaps = 91/498 (18%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ +D L E+ + ++ + G L++A +G Sbjct 30 KSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMAL----------AGRDILARAKNG-T 78 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 K+ + K N +ALI+ P+RELA QT ++ K++ + ++ GG Sbjct 79 GKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGT---QCMVTTGG 135 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + RD + L + V I+VGTPGR+ DL + ++LS+ V+DEAD +LS+ + I + Sbjct 136 TSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQ 195 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + P Q ++ SAT VK +K + P ++L E ++ + Sbjct 196 ILEFFP------PNRQALLFSATFP-LAVKSFMDKHLTKPYEINLMDELTLK-GISQFYA 247 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 V K K + ++ Sbjct 248 FVEEKQ----------------------------------------KLHCLNTLFSKLQI 267 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +Q+IIFC + + L + + G +SC H R + F++G V Sbjct 268 NQSIIFCNSTNRVELLAKKITELG---------YSCYYSHAKMPQQARNKVFHEFRQGKV 318 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L++ Sbjct 319 RNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYS 378 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDG 686 Y + G + + I++ L + +DE Sbjct 379 LYKIEQELGT-----------------EIKPIPATIDKSLYVAENADAVPRPFRIDELPK 421 Query 687 KVTYGQKRAAGGGSYKGH 704 + G YKG Sbjct 422 GNETVHNK---GYQYKGQ 436 Score = 101 bits (252), Expect = 4e-21, Method: Composition-based stats. Identities = 26/93 (28%), Positives = 42/93 (45%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT +F IP + Sbjct 30 KSFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCL 89 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 Q+V L Q + + Sbjct 90 QLVKPKLNKVQ---------ALILVPTRELALQ 113 >sp|A5E1W4|DBP3_LODEL ATP-dependent RNA helicase DBP3 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP3 PE=3 SV=2 Length=535 Score = 303 bits (776), Expect = 4e-93, Method: Composition-based stats. Identities = 106/432 (25%), Positives = 188/432 (44%), Gaps = 68/432 (16%) Query 246 EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNN 305 F KD V +++ G + +K L + P+RELA Q +N Sbjct 158 PFLLDGKD-VVGVAETGSGKTFAFGVPAINNIITSKNKD--LSVLCISPTRELALQIYDN 214 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++ + + + I GGV+ DQ+ + NG ++VV TPGRL DL++ G ++LS + Sbjct 215 LEDLTR---GTDVSCVAIYGGVSKDDQIKKIRNGANVVVATPGRLVDLINDGAVDLSSIN 271 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 +LVLDEAD +L +G+ + I + P + Q ++ +AT +V++L+ M+ Sbjct 272 YLVLDEADRMLEKGFEEDIKLIIGSTP-----AQGRQTLMFTATWPK-EVRELANNFMNQ 325 Query 426 PTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 P V + D S + +V ++ K + Sbjct 326 PVKVTIGDRDELSANKRITQIVEVLDDKFQK----------------------------- 356 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 K L + ++ ++F K + +E + ++F Sbjct 357 -----EKKLINLLQKYQNTGNGDNKILVFALYKKEASRIESLLHR---------NKFKVA 402 Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +HGD +R Q L+ FK G+ L+ TDVAARG+DI V YVIN+T P ++YVHR+ Sbjct 403 AIHGDLSQQQRTQALQSFKSGECNLLLATDVAARGLDIPNVKYVINLTFPLTIEDYVHRL 462 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCS-----------SRGKGCYNTRLKEDGGCTIW 652 GR GRA + G+A + +++ + +C+ + K +T+ K + Sbjct 463 GRTGRAGQTGIAHTFFTEDEKHLSGALCNILRGANQPVPEALLKYGGHTKKKTHSVYGAF 522 Query 653 YNEMQLLSEIEE 664 Y ++ + + +E Sbjct 523 YKDVDMPIDSKE 534 Score = 94.4 bits (233), Expect = 7e-19, Method: Composition-based stats. Identities = 31/111 (28%), Positives = 51/111 (46%), Gaps = 10/111 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++ + +++ + + + PT IQ+ S P +L G DV+ AETGSGKT AF +P Sbjct 127 ILSFDQIKLQKDVSSKLTK--FPKPTPIQSVSWPFLLDGKDVVGVAETGSGKTFAFGVPA 184 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 I + + K K S + + YD G+D C Sbjct 185 INNIITS--------KNKDLSVLCISPTRELALQIYDNLEDLTRGTDVSCV 227 >sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens OX=9606 GN=DDX23 PE=1 SV=3 Length=820 Score = 311 bits (797), Expect = 4e-93, Method: Composition-based stats. Identities = 93/413 (23%), Positives = 165/413 (40%), Gaps = 79/413 (19%) Query 251 PKDGFVALSKAPDGYIVKS------QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLN 304 + +++ G + ++ + + P A+I+ P+RELA+Q Sbjct 427 QNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEE 486 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 +F K + +R + +IGG++ DQ L G +IV+ TPGRL D++ L LS+ Sbjct 487 ETIKFGKPLG---IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRC 543 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG--------------------KRLQVI 404 ++VLDEAD ++ G+ + ++ +P K Q + Sbjct 544 TYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTV 603 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT+ V++L+ + P V + + V V ++ R Sbjct 604 MFTATMPPA-VERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKR---------- 652 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + + +++ IIF K CD L + Sbjct 653 ------------------------------KKLLAILEQGFDPPIIIFVNQKKGCDVLAK 682 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G ++ LHG + +R+ L K G L+ TDVA RGIDI V Sbjct 683 SLEKMG---------YNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDV 733 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 V+N + ++Y+HRIGR GRA + G+AI+ + E V+Y + + + Sbjct 734 SMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 786 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 0/104 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + + P I + +++ + PT IQ ++IP+ L D++ AETGSGKT AF IP+ Sbjct 390 IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPL 449 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + K + + + + + + F Sbjct 450 LVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK 493 >sp|A9L5D5|RHLB_SHEB9 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain OS195) OX=399599 GN=rhlB PE=3 SV=1 Length=438 Score = 300 bits (768), Expect = 4e-93, Method: Composition-based stats. Identities = 118/507 (23%), Positives = 196/507 (39%), Gaps = 87/507 (17%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 ++ DL L E+ + ++ L ++ G Sbjct 8 TQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGK 59 Query 266 IVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + + +P N P+A+I+ P+RELA Q + K+ L+ Sbjct 60 TMAFLV-ATFNHLLSTPVPEGRLINQPRAIIMAPTRELAIQIAKDAILLAKHTH---LKV 115 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 ++ GG + Q VL+ GVDI++GT GR+ D V G + L+ ++ +VLDEAD + G+ Sbjct 116 GIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGF 175 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I + ++P+ + ++ SATL S V++L+ M+ P V++ E+ Sbjct 176 IKDIRFLFRRMPEAN----QRLNMLFSATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKN 230 Query 441 VH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + + P + RL + Sbjct 231 IKEEIFYPSQEEKMRL-----------------------------------------LLT 249 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I+E ++AI+F TK C+ L + +G L GD +R + LE Sbjct 250 LIEEDWPEKAIVFSNTKHSCETLWSWL---------EGDGHRVGLLTGDVPQKKRIRILE 300 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +F G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G++IS Sbjct 301 QFTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFA 360 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 E + S Y+ LL++I I + P Sbjct 361 CEEYALNLPAIESYIN----------HSIPVSNYDSEALLADIPTP--AKIHRKHPSGTR 408 Query 680 PVDEFDGKVTYGQKRAAGGGSYKGHVD 706 + + G G +R+ G H Sbjct 409 NLRDRSGASRPGAQRS--GARPPRHDR 433 Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats. Identities = 63/353 (18%), Positives = 117/353 (33%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+ + + + + + L Sbjct 71 LLSTP--VPEGRLINQPRAIIMAPTRELAIQI-AKDAILLAKHTHLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V DQG+ + +GT + G N Sbjct 116 ---GIVYGGESYDVQRKVLDQGV----------DILIGTTGRIIDYVRQGIIGLN----- 157 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAE 237 + +D+ F KD+ F P N +K E Sbjct 158 ---SIQA-------VVLDEADRMFDLGFIKDIRFLFRRMPEANQRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ E K + SQ + KA++ ++ Sbjct 208 LAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEEKMRLLLTLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVAT 313 >sp|A6WTD3|RHLB_SHEB8 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain OS185) OX=402882 GN=rhlB PE=3 SV=1 Length=438 Score = 300 bits (768), Expect = 4e-93, Method: Composition-based stats. Identities = 118/507 (23%), Positives = 196/507 (39%), Gaps = 87/507 (17%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 ++ DL L E+ + ++ L ++ G Sbjct 8 TQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGK 59 Query 266 IVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + + +P N P+A+I+ P+RELA Q + K+ L+ Sbjct 60 TMAFLV-ATFNHLLSTPVPEGRLINQPRAIIMAPTRELAIQIAKDAILLAKHTH---LKV 115 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 ++ GG + Q VL+ GVDI++GT GR+ D V G + L+ ++ +VLDEAD + G+ Sbjct 116 GIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGF 175 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I + ++P+ + ++ SATL S V++L+ M+ P V++ E+ Sbjct 176 IKDIRFLFRRMPEAN----QRLNMLFSATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKN 230 Query 441 VH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + + P + RL + Sbjct 231 IKEEIFYPSQEEKMRL-----------------------------------------LLT 249 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I+E ++AI+F TK C+ L + +G L GD +R + LE Sbjct 250 LIEEDWPEKAIVFSNTKHSCETLWSWL---------EGDGHRVGLLTGDVPQKKRIRILE 300 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +F G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G++IS Sbjct 301 QFTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFA 360 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 E + S Y+ LL++I I + P Sbjct 361 CEEYALNLPAIESYIN----------HSIPVSNYDSEALLADIPTP--AKIHRKHPSGTR 408 Query 680 PVDEFDGKVTYGQKRAAGGGSYKGHVD 706 + + G G +R+ G H Sbjct 409 NLRDRSGASRPGAQRS--GARPPRHDR 433 Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats. Identities = 63/353 (18%), Positives = 117/353 (33%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+ + + + + + L Sbjct 71 LLSTP--VPEGRLINQPRAIIMAPTRELAIQI-AKDAILLAKHTHLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V DQG+ + +GT + G N Sbjct 116 ---GIVYGGESYDVQRKVLDQGV----------DILIGTTGRIIDYVRQGIIGLN----- 157 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAE 237 + +D+ F KD+ F P N +K E Sbjct 158 ---SIQA-------VVLDEADRMFDLGFIKDIRFLFRRMPEANQRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ E K + SQ + KA++ ++ Sbjct 208 LAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEEKMRLLLTLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVAT 313 >sp|P33906|DEAD_KLEPN ATP-dependent RNA helicase DeaD OS=Klebsiella pneumoniae OX=573 GN=deaD PE=3 SV=3 Length=643 Score = 307 bits (785), Expect = 4e-93, Method: Composition-based stats. Identities = 111/472 (24%), Positives = 186/472 (39%), Gaps = 74/472 (16%) Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 F DLGL I + + ++ + + +++ G Sbjct 4 FETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLD--------GRDVLGMAQTGSG 55 Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + AP+ L++ P+RELA Q + +F K++ + + + Sbjct 56 KTAAFSL---PLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRG--VNVVALY 110 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG QL L G IVVGTPGRL D + G L+LS++ LVLDEAD +L G+ + + Sbjct 111 GGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDV 170 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + QIP + Q + SAT+ +++++ + M P V ++ + + Sbjct 171 ETIMAQIP------EGHQTALFSATMPEA-IRRITRRFMKEPQEVRIQSSVTTRPDISQS 223 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 A + K E VR ++ Sbjct 224 Y----------------------------------------WTAYGMRKNEALVRFLEAE 243 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 D AIIF RTK + + + G ++ L+GD R+Q LER K G Sbjct 244 DFDAAIIFVRTKNATLEVAEALERNG---------YNSAALNGDMNQALREQALERLKDG 294 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + LI TDVAARG+D+ + V+N +P + ++YVHRIGR GRA R G A+ V + Sbjct 295 RLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRER 354 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 ++ ++ + + E + L + + + + D Sbjct 355 RLLRNIERT-----MKLTIPEVELPNAELLSKRRLEKFAAKVQQQLESSDLD 401 Score = 112 bits (279), Expect = 3e-24, Method: Composition-based stats. Identities = 31/108 (29%), Positives = 55/108 (51%), Gaps = 9/108 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++ Sbjct 6 TTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSLPLL 65 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + L+ Q + + + + + F+ G+ Sbjct 66 NNIDPELRAPQ---------ILVLAPTRELAVQVAEAMTEFSKHMRGV 104 >sp|A1RFB3|RHLB_SHESW ATP-dependent RNA helicase RhlB OS=Shewanella sp. (strain W3-18-1) OX=351745 GN=rhlB PE=3 SV=1 Length=439 Score = 300 bits (768), Expect = 4e-93, Method: Composition-based stats. Identities = 108/461 (23%), Positives = 184/461 (40%), Gaps = 71/461 (15%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 ++ DL L E+ + ++ L ++ G Sbjct 8 TQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGK 59 Query 266 IVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + + +P N P+A+I+ P+RELA Q + K+ +L+ Sbjct 60 TMAFLV-ATFNHLLSTPIPEGRQINQPRAIIMAPTRELAIQIAKDAILLAKH---TRLKV 115 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 ++ GG + Q VL+ GVDI++GT GR+ D V G ++L+ ++ +VLDEAD + G+ Sbjct 116 GIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIISLTAIQAVVLDEADRMFDLGF 175 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I + ++P D + ++ SATL S V++L+ M+ P VD+ ++ Sbjct 176 IKDIRFLFRRMP----DANQRLNMLFSATL-SMKVQELAYDHMNDPVKVDIAPDEKTSKN 230 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + V + + K + Sbjct 231 IKEEVFYPSQED----------------------------------------KMRLLLTL 250 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 I+E ++AI+F TK C+NL + +G L GD +R + LE+ Sbjct 251 IEEDWPEKAIVFSNTKHSCENLWSWL---------EGDGHRVGLLTGDVPQKKRIRILEQ 301 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G++IS Sbjct 302 FTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSISFAC 361 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 E + S + +++ + Sbjct 362 EEYALNLPAIESYINHSIPVSNYDSSALLEDIPAPVKIPRK 402 Score = 105 bits (262), Expect = 8e-23, Method: Composition-based stats. Identities = 63/353 (18%), Positives = 121/353 (34%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG++ + + + A + R Sbjct 71 LLSTP--IPEGRQINQPRAIIMAPTRELAIQIAKDAILLAKHT----------------R 112 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V DQG+ + +GT + + Sbjct 113 LKVGIVYGGESYDVQRKVLDQGV----------DILIGTT---------------GRIID 147 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAE 237 Y + + T + +D+ F KD+ F P N +K E Sbjct 148 YVRQGIISLTAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDANQRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ + K + SQ + KA++ ++ Sbjct 208 LAYDHMNDPVKVDIAPDEKTSKNIKEEVFYPSQEDKMRLLLTLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVAT 313 >sp|A4YB09|RHLB_SHEPC ATP-dependent RNA helicase RhlB OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) OX=319224 GN=rhlB PE=3 SV=1 Length=439 Score = 300 bits (768), Expect = 4e-93, Method: Composition-based stats. Identities = 108/461 (23%), Positives = 184/461 (40%), Gaps = 71/461 (15%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 ++ DL L E+ + ++ L ++ G Sbjct 8 TQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGK 59 Query 266 IVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + + +P N P+A+I+ P+RELA Q + K+ +L+ Sbjct 60 TMAFLV-ATFNHLLSTPIPEGRQINQPRAIIMAPTRELAIQIAKDAILLAKH---TRLKV 115 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 ++ GG + Q VL+ GVDI++GT GR+ D V G ++L+ ++ +VLDEAD + G+ Sbjct 116 GIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIISLTAIQAVVLDEADRMFDLGF 175 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I + ++P D + ++ SATL S V++L+ M+ P VD+ ++ Sbjct 176 IKDIRFLFRRMP----DANQRLNMLFSATL-SMKVQELAYDHMNDPVKVDIAPDEKTSKN 230 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + V + + K + Sbjct 231 IKEEVFYPSQED----------------------------------------KMRLLLTL 250 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 I+E ++AI+F TK C+NL + +G L GD +R + LE+ Sbjct 251 IEEDWPEKAIVFSNTKHSCENLWSWL---------EGDGHRVGLLTGDVPQKKRIRILEQ 301 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G++IS Sbjct 302 FTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSISFAC 361 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 E + S + +++ + Sbjct 362 EEYALNLPAIESYINHSIPVSNYDSSALLEDIPAPVKIPRK 402 Score = 105 bits (262), Expect = 8e-23, Method: Composition-based stats. Identities = 63/353 (18%), Positives = 121/353 (34%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG++ + + + A + R Sbjct 71 LLSTP--IPEGRQINQPRAIIMAPTRELAIQIAKDAILLAKHT----------------R 112 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V DQG+ + +GT + + Sbjct 113 LKVGIVYGGESYDVQRKVLDQGV----------DILIGTT---------------GRIID 147 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAE 237 Y + + T + +D+ F KD+ F P N +K E Sbjct 148 YVRQGIISLTAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDANQRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ + K + SQ + KA++ ++ Sbjct 208 LAYDHMNDPVKVDIAPDEKTSKNIKEEVFYPSQEDKMRLLLTLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVAT 313 >sp|Q5HME0|CSHA_STAEQ DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=cshA PE=3 SV=1 Length=509 Score = 302 bits (774), Expect = 4e-93, Method: Composition-based stats. Identities = 99/480 (21%), Positives = 192/480 (40%), Gaps = 75/480 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ + ++ ++ + + D + ++ G Sbjct 3 NFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL--------EGDDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + + ++LI+ P+RELA Q +++F K K++ + + GG+ Sbjct 55 AF----GIPLIEKVVGQQGVQSLILAPTRELAMQVAEQLREFSK---GQKVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKALKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP ++ Q ++ SAT+ +++L ++ M P + + + Sbjct 168 MDKIP-----AEQRQTMLFSATMPKA-IQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L + +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALLSKG---------YKAEGLHGDITQAKRLEVLKKFKNDQID 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL----NCTISQVEPDIKVPVDE 683 + + R + E + ++ + + ++ ++ D Sbjct 353 RQIEDVNNRRMKALR-PPHRKEVLKAREDDIKDRVQNWMSRENEPRLQRISSELLKEYDS 411 Score = 101 bits (252), Expect = 3e-21, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q +E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V G++G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GQQGVQSL--ILAPTRELAMQVAEQLREFSKG 95 >sp|Q8CRP6|CSHA_STAES DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=cshA PE=3 SV=1 Length=509 Score = 302 bits (773), Expect = 5e-93, Method: Composition-based stats. Identities = 100/480 (21%), Positives = 193/480 (40%), Gaps = 75/480 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N K+LG++ + ++ ++ + + D + ++ G Sbjct 3 NFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYAL--------EGDDILGQAQTGTGKTG 54 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + + ++LI+ P+RELA Q +++F K K++ + + GG+ Sbjct 55 AF----GIPLIEKVVGQQGVQSLILAPTRELAMQVAEQLREFSK---GQKVQVVTVFGGM 107 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ VL+ G IVVGTPGR+ D ++ L + L+LDEAD +++ G+ D + + Sbjct 108 PIERQIKVLKRGPQIVVGTPGRVIDHLNRRTLKTQGIHTLILDEADEMMNMGFIDDMRFI 167 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++IP ++ Q ++ SAT+ +++L ++ M P + + + Sbjct 168 MDKIP-----AEQRQTMLFSATMPKA-IQELVQQFMKAPKIIKTMNNEMSDPQIDEYYTI 221 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + K + + H+ + Sbjct 222 VKE----------------------------------------LEKFDTFTNFLDVHQPE 241 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 AI+F RTK D L + +G + LHGD +R + L++FK + Sbjct 242 LAIVFGRTKRRVDELTSALLSKG---------YKAEGLHGDITQAKRLEVLKKFKNDQID 292 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI GV +V N +P + ++Y HRIGR GRA + G+A++ V + Sbjct 293 ILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYI 352 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL----NCTISQVEPDIKVPVDE 683 + + R + E + ++ + + ++ ++ D Sbjct 353 RQIEDVNNRRMKALR-PPHRKEVLKAREDDIKDRVQNWMSRENEPRLQRISSELLKEYDS 411 Score = 101 bits (252), Expect = 3e-21, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 10/105 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F E+G+ + Q +E M + PT IQ +SIP L G D+L A+TG+GKTGAF IP+ Sbjct 1 MQNFKELGISDKTVQTLEAMGFKEPTPIQKDSIPYALEGDDILGQAQTGTGKTGAFGIPL 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I+ V G++G ++ + + M ++ F+ G Sbjct 61 IEKVV--------GQQGVQSL--ILAPTRELAMQVAEQLREFSKG 95 >sp|A9MJ29|RHLB_SALAR ATP-dependent RNA helicase RhlB OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) OX=41514 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (766), Expect = 5e-93, Method: Composition-based stats. Identities = 114/453 (25%), Positives = 187/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---VTGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + T ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMTDLPKPLRL 399 Score = 98.7 bits (244), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQVTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|Q8JFP1|IF4A2_CHICK Eukaryotic initiation factor 4A-II OS=Gallus gallus OX=9031 GN=EIF4A2 PE=2 SV=1 Length=407 Score = 298 bits (764), Expect = 5e-93, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 188/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F LK + L+ + +G E+ P G+ +++A G K+ + + Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSG-TGKTATFAISILQ 93 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 Q + +AL++ P+RELA+Q I Y+ IGG R+++ L+ Sbjct 94 QLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGAT---CHACIGGTNVRNEMQKLQA 150 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 IVVGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 151 EAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------ 204 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 +QV++ SAT+ DV ++++K M P + +K E+ + + + V + +L Sbjct 205 STNIQVVLLSATMP-MDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKL-- 261 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 262 --------------------------------DTLCDLYETLTIT-----QAVIFLNTRR 284 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ LHGD ER + F+ G R LI TD+ AR Sbjct 285 KVDWLTEKM---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 335 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + Sbjct 336 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ET 390 Query 638 CYNTRLKE 645 YNT ++E Sbjct 391 FYNTTVEE 398 Score = 94.0 bits (232), Expect = 4e-19, Method: Composition-based stats. Identities = 22/107 (21%), Positives = 42/107 (39%), Gaps = 9/107 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 + LK+ Q + + A C Sbjct 95 LEIDLKETQ---------ALVLAPTRELAQQIQKVILALGDYMGATC 132 >sp|Q8EJQ5|RHLB_SHEON ATP-dependent RNA helicase RhlB OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=rhlB PE=3 SV=1 Length=439 Score = 300 bits (767), Expect = 5e-93, Method: Composition-based stats. Identities = 108/455 (24%), Positives = 186/455 (41%), Gaps = 71/455 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL L E+ + ++ L ++ G + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGKTMA 62 Query 269 SQHSG-NAQVTQTKF---LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + N ++ + N P+A+I+ P+RELA Q + K+ +L+ ++ Sbjct 63 FLVATFNHLLSSSIPEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKH---TRLKVGIVY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + Q VL+ GVDI++GT GR+ D V G +NL+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P + + ++ SATL S V++L+ M+ P V++ E+ + Sbjct 180 RFLFRRMP----NADQRLNMLFSATL-SMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P RL + I+E Sbjct 235 IFYPSQEDKMRL-----------------------------------------LLTLIEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 ++AI+F TK C+NL + +G L GD +R + LE+F + Sbjct 254 DWPEKAIVFSNTKHSCENLWSWL---------EGDGHRVGLLTGDVPQKKRIRILEQFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G+++S E Sbjct 305 GQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEEY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + + D + +++ Sbjct 365 ALNLPAIETYINHSIPVSNYDRDALLDDIPSPVKI 399 Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats. Identities = 62/353 (18%), Positives = 120/353 (34%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + EG++ + + + A + R Sbjct 71 LLSS--SIPEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKHT----------------R 112 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V DQG+ + +GT + G + N Sbjct 113 LKVGIVYGGESYDVQRKVLDQGV----------DILIGTTGRIIDYVRQGIINLN----- 157 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAE 237 + +D+ F KD+ F P+ N +K E Sbjct 158 ---AIQA-------VVLDEADRMFDLGFIKDIRFLFRRMPNADQRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ + K + SQ + KA++ ++ Sbjct 208 LAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKMRLLLTLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVAT 313 >sp|Q0UK12|RRP3_PHANO ATP-dependent rRNA helicase RRP3 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=RRP3 PE=3 SV=2 Length=546 Score = 303 bits (776), Expect = 6e-93, Method: Composition-based stats. Identities = 101/442 (23%), Positives = 166/442 (38%), Gaps = 71/442 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K DLG+ E+ +N A ++ + + L++ G Sbjct 115 KTFADLGVREELCDACENLGYKTATPIQTESIPLALA--------GKDIIGLAETGSGKT 166 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P A LI+ P+RELA Q + I+ ++ ++GG Sbjct 167 AAFVLPI---LQALLDKPQAYFGLIMAPTRELAYQISQQVDALGSIIN---VKCATLVGG 220 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q L I+V +PGRL D + +T +L +++LVLDEAD LL + D ++ Sbjct 221 MDMVPQAIALSKRPHIIVASPGRLLDHLENTKGFSLKHLKYLVLDEADRLLDLDFGDSLD 280 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHV 444 ++ +P+ + SAT+ S V+ L + P V + V T+ Sbjct 281 KIFKVLPR-----DDRHTYLFSATM-SSKVESLQRAALKNPVRVSISSSSHQVVSTLLQS 334 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K K Y + + ++ Sbjct 335 YMLIPHK----------------------------------------YKDLYLIHLLNDN 354 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 I+F RT + L G F + LHG R L +FK Sbjct 355 IGHATILFTRTVNETQRLAVLLRTLG---------FQALPLHGQLSQSNRLGALNKFKAK 405 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V V+N LP + + YVHR+GR RA + G A+S V Sbjct 406 ARDILVATDVAARGLDIPSVDLVVNFDLPHDSETYVHRVGRTARAGKSGKAVSFVTQYDL 465 Query 625 KVWYHVCSSRGKGCYNTRLKED 646 +++ + + GK ++ D Sbjct 466 EIFQRIEHALGKQVPEEKVSRD 487 Score = 104 bits (260), Expect = 3e-22, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++GV E+ A E + + T IQ ESIPL L G D++ AETGSGKT AF +P++ Sbjct 115 KTFADLGVREELCDACENLGYKTATPIQTESIPLALAGKDIIGLAETGSGKTAAFVLPIL 174 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + + K + + + + A + C Sbjct 175 QALLD---------KPQAYFGLIMAPTRELAYQISQQVDALGSIINVKCA 215 >sp|A1D373|PRP5_NEOFI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=prp5 PE=3 SV=1 Length=1193 Score = 317 bits (813), Expect = 6e-93, Method: Composition-based stats. Identities = 112/510 (22%), Positives = 206/510 (40%), Gaps = 102/510 (20%) Query 195 YLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG 254 +D+ K +K+S GL + + +++ + Sbjct 549 GVDVPKPVMKWS----QCGLGVQTLDVIHRLGYENPTSIQSQAIPAIMS--------GRD 596 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKY 312 + ++K G + + + L N P LI+ P+RELA Q + K F K Sbjct 597 VIGVAKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKA 656 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVL 369 ++ LR + GG +DQ++ L+ G +IVV TPGR+ DL++ NL +V ++VL Sbjct 657 LN---LRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVL 713 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD + G+ + ++ I Q ++ SAT +++ L+ K + P + Sbjct 714 DEADRMFDMGFEPQVMKIMANI------RPDRQTVLFSATFP-RNMEALARKSLTKPIEI 766 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + G+ V + +V N T + + Sbjct 767 VVGGKSVVAPEITQIVEVRNEDT----------------------------------KFV 792 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 ++L+ + + ++ +A+IF + D L + +++G + C+ +HG + Sbjct 793 RLLEILGNLYSDDANEDARALIFVDRQEAADTLLRELMRKG---------YPCMSIHGGK 843 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 +R +E FK G LI T VAARG+D+ + V+N P+ ++YVHR GR GRA Sbjct 844 DQIDRDSTIEDFKAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRA 903 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT 669 G A++ + E+E+ + + L + Sbjct 904 GNTGTAVTFLTEEQERYSVDIAKA--------------------------------LRQS 931 Query 670 ISQVEPDIKVPVDEFDGKVTYGQKRAAGGG 699 +V ++ VD F KV G+++A+ G Sbjct 932 GQKVPEPVQKMVDSFLEKVKAGKEKASASG 961 Score = 106 bits (264), Expect = 4e-22, Method: Composition-based stats. Identities = 26/97 (27%), Positives = 50/97 (52%), Gaps = 4/97 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ + + + + PT IQ+++IP I+ G DV+ A+TGSGKT AF IP+ Sbjct 556 VMKWSQCGLGVQTLDVIHRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPM 615 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD 97 + + +DQ+ + + I + + + Sbjct 616 FRHI----RDQRPLENMEGPIGLIMTPTRELATQIHK 648 >sp|Q1DHB2|PRP5_COCIM Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides immitis (strain RS) OX=246410 GN=PRP5 PE=3 SV=1 Length=1197 Score = 317 bits (813), Expect = 6e-93, Method: Composition-based stats. Identities = 112/494 (23%), Positives = 197/494 (40%), Gaps = 102/494 (21%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 GL + ++ +++ + + ++K G + Sbjct 565 GLGVQTLDVIRKLGYEQPTSIQSQAIPAIMS--------GRDVIGVAKTGSGKTIAFLLP 616 Query 273 GNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + L N P LI+ P+RELA Q K F K ++ LR + GG + Sbjct 617 MFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKECKPFLKALN---LRAVCAYGGAPIK 673 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 DQ++ L+ G +I+V TPGR+ DL++ NL +V ++VLDEAD + G+ + ++ Sbjct 674 DQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 733 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV- 446 + I Q ++ SAT +++ L+ K + P + + G V + +V Sbjct 734 ISNI------RPSRQTVLFSATFP-RNMEALARKTLTKPVEIIVGGRSVVAQEITQIVEV 786 Query 447 -PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N K RL E LG + + ++ Sbjct 787 RPENTKFVRLLELLGNLY------------------------------------SDDNNE 810 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +A+IF + D L + +++G + C+ +HG + +R ++ FK G Sbjct 811 DARALIFVDRQEAADGLLRDLMRKG---------YPCMSIHGGKDQVDRDSTIDDFKAGI 861 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 LI T VAARG+D+ + VIN P+ ++YVHR GR GRA G A++ + E+E+ Sbjct 862 FPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQER 921 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + + L + V ++ VD F Sbjct 922 YSVDIAKA--------------------------------LKQSGQSVPEAVQKMVDSFL 949 Query 686 GKVTYGQKRAAGGG 699 KV G+++A+ G Sbjct 950 EKVKSGKEKASASG 963 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 13/147 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ + + ++ + PT IQ+++IP I+ G DV+ A+TGSGKT AF +P+ Sbjct 558 VQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPM 617 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF--AIGSDGLCCQSREVKE 118 + + KDQ+ + + + + + + F A+ +C + Sbjct 618 FRHI----KDQRPLENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIK 673 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLC 145 +G E+ G Sbjct 674 DQIAELKRGA-------EIIVCTPGRM 693 >sp|P0A2P0|RHLB_SALTY ATP-dependent RNA helicase RhlB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rhlB PE=3 SV=2 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|P0A2P1|RHLB_SALTI ATP-dependent RNA helicase RhlB OS=Salmonella typhi OX=90370 GN=rhlB PE=3 SV=2 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B4TNT3|RHLB_SALSV ATP-dependent RNA helicase RhlB OS=Salmonella schwarzengrund (strain CVM19633) OX=439843 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|C0Q2V9|RHLB_SALPC ATP-dependent RNA helicase RhlB OS=Salmonella paratyphi C (strain RKS4594) OX=476213 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|A9MXF3|RHLB_SALPB ATP-dependent RNA helicase RhlB OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) OX=1016998 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B4SZ26|RHLB_SALNS ATP-dependent RNA helicase RhlB OS=Salmonella newport (strain SL254) OX=423368 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B4TB13|RHLB_SALHS ATP-dependent RNA helicase RhlB OS=Salmonella heidelberg (strain SL476) OX=454169 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B5RFS3|RHLB_SALG2 ATP-dependent RNA helicase RhlB OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) OX=550538 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B5QVH2|RHLB_SALEP ATP-dependent RNA helicase RhlB OS=Salmonella enteritidis PT4 (strain P125109) OX=550537 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|Q57HT6|RHLB_SALCH ATP-dependent RNA helicase RhlB OS=Salmonella choleraesuis (strain SC-B67) OX=321314 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B5EZ40|RHLB_SALA4 ATP-dependent RNA helicase RhlB OS=Salmonella agona (strain SL483) OX=454166 GN=rhlB PE=3 SV=1 Length=421 Score = 299 bits (765), Expect = 6e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=prp5 PE=3 SV=1 Length=1192 Score = 317 bits (813), Expect = 6e-93, Method: Composition-based stats. Identities = 109/492 (22%), Positives = 198/492 (40%), Gaps = 98/492 (20%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 GL + ++ +++ + + ++K G V Sbjct 563 GLGVQALDVIERLGYESPTSIQSQAIPAIMS--------GRDVIGVAKTGSGKTVAFLIP 614 Query 273 GNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + L N P LI+ P+RELA Q + K F K ++ LR + GG + Sbjct 615 MFRHIKDQRPLDNMEGPIGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIK 671 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 DQ++ L+ G +IVV TPGR+ DL++ NL +V ++VLDEAD + G+ + ++ Sbjct 672 DQIADLKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 731 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 I Q ++ SAT +++ L+ K + P + + G V + +V Sbjct 732 MANI------RPDRQTVLFSATFP-RNMEALARKALTKPIEIIVGGRSVVAPEITQIVEV 784 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 N T + +++L+ + + ++ Sbjct 785 RNEDT----------------------------------KFVRLLEILGNLYSDDANEDA 810 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +++IF + D L + +++G + C+ +HG + +R +E FK G Sbjct 811 RSLIFVERQEAADALLRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFP 861 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 LI T VAARG+D+ + V+N P+ ++YVHR GR GRA G A++ + E+E+ Sbjct 862 VLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYS 921 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + L + QV ++ VD F K Sbjct 922 VDIAKA--------------------------------LKQSGQQVPEPVQKMVDSFLEK 949 Query 688 VTYGQKRAAGGG 699 V G+++A+ G Sbjct 950 VKAGKEKASASG 961 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 28/97 (29%), Positives = 50/97 (52%), Gaps = 4/97 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ + +E + + PT IQ+++IP I+ G DV+ A+TGSGKT AF IP+ Sbjct 556 VQKWSQCGLGVQALDVIERLGYESPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPM 615 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD 97 + + KDQ+ + I + + + Sbjct 616 FRHI----KDQRPLDNMEGPIGLIMTPTRELATQIHK 648 >sp|P93008|RH21_ARATH DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis thaliana OX=3702 GN=RH21 PE=2 SV=1 Length=733 Score = 308 bits (789), Expect = 7e-93, Method: Composition-based stats. Identities = 94/444 (21%), Positives = 171/444 (39%), Gaps = 77/444 (17%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 ++ L E+ ++ ++ A + + + +++ G Sbjct 316 EESKLTSELLKAVERAGYKKPSPIQMAAIPLGL--------QQRDVIGIAETGSGKTAAF 367 Query 270 QHSGNAQVTQTKFLPN-----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 A +++ + P A+++ P+RELA+Q +F Y+ R I+ Sbjct 368 VLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLG---FRVTSIV 424 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + +Q + G +IV+ TPGRL D + L+Q ++VLDEAD ++ G+ + Sbjct 425 GGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQV 484 Query 385 NRMHNQIPQVTSDGKR-----------LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 + + +P + + SAT+ V++L+ K + P V + Sbjct 485 AGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPG-VERLARKYLRNPVVVTIGT 543 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 D + V+ + K Sbjct 544 AGKTTDLISQHVIMMKESE----------------------------------------K 563 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + + E AI+F TK +CD++ + + G + LHG + + Sbjct 564 FFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAG---------YRVTTLHGGKSQEQ 614 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R+ +LE F+ L+ TDV RGIDI V +VIN +P + Y HRIGR GRA + G Sbjct 615 REISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSG 674 Query 614 LAISLVATEKEKVWYHVCSSRGKG 637 +A S + +V+Y + + Sbjct 675 VATSFLTLHDTEVFYDLKQMLVQS 698 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 48/103 (47%), Gaps = 1/103 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E + E+ +AVE + P+ IQ +IPL L DV+ AETGSGKT AF +P+ Sbjct 312 MRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPM 371 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + L E + + + + + FA Sbjct 372 LAYISR-LPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFA 413 >sp|Q0SYX0|RHLB_SHIF8 ATP-dependent RNA helicase RhlB OS=Shigella flexneri serotype 5b (strain 8401) OX=373384 GN=rhlB PE=3 SV=1 Length=421 Score = 298 bits (764), Expect = 7e-93, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIENYIGHSILVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|A3D9I5|RHLB_SHEB5 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) OX=325240 GN=rhlB PE=3 SV=1 Length=438 Score = 299 bits (766), Expect = 8e-93, Method: Composition-based stats. Identities = 118/507 (23%), Positives = 196/507 (39%), Gaps = 87/507 (17%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 ++ DL L E+ + ++ L ++ G Sbjct 8 TQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGK 59 Query 266 IVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + + +P N P+A+I+ P+RELA Q + K+ L+ Sbjct 60 TMAFLV-ATFNHLLSTPVPEGRLINQPRAIIMAPTRELAIQIAKDAILLAKHTH---LKV 115 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 ++ GG + Q VL+ GVDI++GT GR+ D V G + L+ ++ +VLDEAD + G+ Sbjct 116 GIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGF 175 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I + ++P+ + ++ SATL S V++L+ M+ P V++ E+ Sbjct 176 IKDIRFLFRRMPEAN----QRLNMLFSATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKN 230 Query 441 VH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + + P + RL + Sbjct 231 IKEEIFYPSQEEKMRL-----------------------------------------LLT 249 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I+E ++AI+F TK C+ L + +G L GD +R + LE Sbjct 250 LIEEDWPEKAIVFSNTKHSCETLWSWL---------EGDGHRVGLLTGDVPQKKRIRILE 300 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +F G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G++IS Sbjct 301 QFTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFA 360 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 E + S Y+ LL++I I + P Sbjct 361 CEEYALNLPAIESYIN----------HSIPVSNYDSEALLADIPTP--AKIHRKHPSGTR 408 Query 680 PVDEFDGKVTYGQKRAAGGGSYKGHVD 706 + + G G +R+ G H Sbjct 409 NLRDRSGTSRPGAQRS--GARPPRHDR 433 Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats. Identities = 63/353 (18%), Positives = 117/353 (33%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+ + + + + + L Sbjct 71 LLSTP--VPEGRLINQPRAIIMAPTRELAIQI-AKDAILLAKHTHLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V DQG+ + +GT + G N Sbjct 116 ---GIVYGGESYDVQRKVLDQGV----------DILIGTTGRIIDYVRQGIIGLN----- 157 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAE 237 + +D+ F KD+ F P N +K E Sbjct 158 ---SIQA-------VVLDEADRMFDLGFIKDIRFLFRRMPEANQRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ E K + SQ + KA++ ++ Sbjct 208 LAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEEKMRLLLTLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVAT 313 >sp|B8E670|RHLB_SHEB2 ATP-dependent RNA helicase RhlB OS=Shewanella baltica (strain OS223) OX=407976 GN=rhlB PE=3 SV=1 Length=438 Score = 299 bits (766), Expect = 8e-93, Method: Composition-based stats. Identities = 118/507 (23%), Positives = 196/507 (39%), Gaps = 87/507 (17%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 ++ DL L E+ + ++ L ++ G Sbjct 8 TQRFADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGK 59 Query 266 IVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + + +P N P+A+I+ P+RELA Q + K+ L+ Sbjct 60 TMAFLV-ATFNHLLSTPVPEGRLINQPRAIIMAPTRELAIQIAKDAILLAKHTH---LKV 115 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 ++ GG + Q VL+ GVDI++GT GR+ D V G + L+ ++ +VLDEAD + G+ Sbjct 116 GIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIIGLNSIQAVVLDEADRMFDLGF 175 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 I + ++P+ + ++ SATL S V++L+ M+ P V++ E+ Sbjct 176 IKDIRFLFRRMPEAN----QRLNMLFSATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKN 230 Query 441 VH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + + P + RL + Sbjct 231 IKEEIFYPSQEEKMRL-----------------------------------------LLT 249 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I+E ++AI+F TK C+ L + +G L GD +R + LE Sbjct 250 LIEEDWPEKAIVFSNTKHSCETLWSWL---------EGDGHRVGLLTGDVPQKKRIRILE 300 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +F G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G++IS Sbjct 301 QFTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGMSISFA 360 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 E + S Y+ LL++I I + P Sbjct 361 CEEYALNLPAIESYIN----------HSIPVSNYDSEALLADIPTP--AKIHRKHPSGTR 408 Query 680 PVDEFDGKVTYGQKRAAGGGSYKGHVD 706 + + G G +R+ G H Sbjct 409 NLRDRSGTSRPGAQRS--GARPPRHDR 433 Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats. Identities = 63/353 (18%), Positives = 117/353 (33%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+ + + + + + L Sbjct 71 LLSTP--VPEGRLINQPRAIIMAPTRELAIQI-AKDAILLAKHTHLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V DQG+ + +GT + G N Sbjct 116 ---GIVYGGESYDVQRKVLDQGV----------DILIGTTGRIIDYVRQGIIGLN----- 157 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAE 237 + +D+ F KD+ F P N +K E Sbjct 158 ---SIQA-------VVLDEADRMFDLGFIKDIRFLFRRMPEANQRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ E K + SQ + KA++ ++ Sbjct 208 LAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEEKMRLLLTLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCETLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVAT 313 >sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp10 PE=1 SV=1 Length=848 Score = 311 bits (796), Expect = 8e-93, Method: Composition-based stats. Identities = 118/511 (23%), Positives = 196/511 (38%), Gaps = 39/511 (8%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 + N + +GL + + + ++ + V +++ G Sbjct 68 ASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLL--------EGRDVVGMARTGSGK 119 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + T N +ALI+ P+RELA QT+ +K F K LR + I+G Sbjct 120 TAAFVIPMIEHLKSTLANSN-TRALILSPNRELALQTVKVVKDFSK---GTDLRSVAIVG 175 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 GV+ +Q S+L DIVV TPGR L KL LS + ++V DEAD L G++ + Sbjct 176 GVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLT 235 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + +P Q ++ SATL V ++ + P V L E V + Sbjct 236 EILHALPTS------RQTLLFSATLPRTLV-DFAKAGLQDPVLVRLDVESKVSADLQSAF 288 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V I + R N + E A++ + Sbjct 289 FSVKTAEREAALLCILQDIIKLPLKDNVRPREIGNVNNPKKRKRAL---ELALKGSESGS 345 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D ++F TK + + + +Q G +S ++G R + F+ G Sbjct 346 PDSTLVFVPTKHHVEYVSELLVQAG---------YSVSKIYGSLDQEARLNEINNFRLGK 396 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TDVA+RGIDI + VIN P + + +VHR+GR RA R G A SLV E Sbjct 397 TNLLVVTDVASRGIDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAG 456 Query 626 VWYHVCSSRGKGCYNT--RLKEDGGCTIWYNEM------QLLSEIEEHLNCTISQVEPDI 677 + + + ++K D C + +L++E+ E + +S+ Sbjct 457 YLLDLQLFLNRPLVTSSKQVKTDSDCDFTKQIVLGSLPQELVAELLEWVQRIVSRDVELQ 516 Query 678 KVPVDEFDGKVTYGQKRAAGGGSYKGHVDIL 708 ++ G+ Y + RA L Sbjct 517 QLSNVAARGEKLYFRTRATCSAESAKRAKEL 547 Score = 112 bits (281), Expect = 2e-24, Method: Composition-based stats. Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 7/106 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F MG+ + +A+ + + PT IQ ++IPL+L G DV+ A TGSGKT AF IP+I Sbjct 69 SNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMI 128 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + TL + T S + + F+ G+D Sbjct 129 EHLKSTLANSN-------TRALILSPNRELALQTVKVVKDFSKGTD 167 >sp|Q5RKI1|IF4A2_RAT Eukaryotic initiation factor 4A-II OS=Rattus norvegicus OX=10116 GN=Eif4a2 PE=1 SV=1 Length=407 Score = 298 bits (763), Expect = 9e-93, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 189/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F LK + L+ + +G E+ P G+ +++A G K+ + + Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSG-TGKTATFAISILQ 93 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 Q + +AL++ P+RELA+Q I Y+ IGG R+++ L+ Sbjct 94 QLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT---CHACIGGTNVRNEMQKLQA 150 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 IVVGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 151 EAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------ 204 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 +QV++ SAT+ + DV ++++K M P + +K E+ + + + V + +L Sbjct 205 NTSIQVVLLSATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKL-- 261 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 262 --------------------------------DTLCDLYETLTIT-----QAVIFLNTRR 284 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ LHGD ER + F+ G R LI TD+ AR Sbjct 285 KVDWLTEKM---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 335 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + Sbjct 336 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ET 390 Query 638 CYNTRLKE 645 YNT ++E Sbjct 391 FYNTTVEE 398 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 21/107 (20%), Positives = 41/107 (38%), Gaps = 9/107 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 + K+ Q + + A C Sbjct 95 LEIEFKETQ---------ALVLAPTRELAQQIQKVILALGDYMGATC 132 >sp|Q5R4X1|IF4A2_PONAB Eukaryotic initiation factor 4A-II OS=Pongo abelii OX=9601 GN=EIF4A2 PE=2 SV=1 Length=407 Score = 298 bits (763), Expect = 9e-93, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 189/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F LK + L+ + +G E+ P G+ +++A G K+ + + Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSG-TGKTATFAISILQ 93 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 Q + +AL++ P+RELA+Q I Y+ IGG R+++ L+ Sbjct 94 QLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT---CHACIGGTNVRNEMQKLQA 150 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 IVVGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 151 EAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------ 204 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 +QV++ SAT+ + DV ++++K M P + +K E+ + + + V + +L Sbjct 205 NTSIQVVLLSATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKL-- 261 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 262 --------------------------------DTLCDLYETLTIT-----QAVIFLNTRR 284 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ LHGD ER + F+ G R LI TD+ AR Sbjct 285 KVDWLTEKM---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 335 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + Sbjct 336 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ET 390 Query 638 CYNTRLKE 645 YNT ++E Sbjct 391 FYNTTVEE 398 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 21/107 (20%), Positives = 41/107 (38%), Gaps = 9/107 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 + K+ Q + + A C Sbjct 95 LEIEFKETQ---------ALVLAPTRELAQQIQKVILALGDYMGATC 132 >sp|P10630|IF4A2_MOUSE Eukaryotic initiation factor 4A-II OS=Mus musculus OX=10090 GN=Eif4a2 PE=1 SV=2 Length=407 Score = 298 bits (763), Expect = 9e-93, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 189/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F LK + L+ + +G E+ P G+ +++A G K+ + + Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSG-TGKTATFAISILQ 93 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 Q + +AL++ P+RELA+Q I Y+ IGG R+++ L+ Sbjct 94 QLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT---CHACIGGTNVRNEMQKLQA 150 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 IVVGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 151 EAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------ 204 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 +QV++ SAT+ + DV ++++K M P + +K E+ + + + V + +L Sbjct 205 NTSIQVVLLSATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKL-- 261 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 262 --------------------------------DTLCDLYETLTIT-----QAVIFLNTRR 284 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ LHGD ER + F+ G R LI TD+ AR Sbjct 285 KVDWLTEKM---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 335 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + Sbjct 336 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ET 390 Query 638 CYNTRLKE 645 YNT ++E Sbjct 391 FYNTTVEE 398 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 21/107 (20%), Positives = 41/107 (38%), Gaps = 9/107 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 + K+ Q + + A C Sbjct 95 LEIEFKETQ---------ALVLAPTRELAQQIQKVILALGDYMGATC 132 >sp|Q14240|IF4A2_HUMAN Eukaryotic initiation factor 4A-II OS=Homo sapiens OX=9606 GN=EIF4A2 PE=1 SV=2 Length=407 Score = 298 bits (763), Expect = 9e-93, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 189/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F LK + L+ + +G E+ P G+ +++A G K+ + + Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSG-TGKTATFAISILQ 93 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 Q + +AL++ P+RELA+Q I Y+ IGG R+++ L+ Sbjct 94 QLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT---CHACIGGTNVRNEMQKLQA 150 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 IVVGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 151 EAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------ 204 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 +QV++ SAT+ + DV ++++K M P + +K E+ + + + V + +L Sbjct 205 NTSIQVVLLSATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKL-- 261 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 262 --------------------------------DTLCDLYETLTIT-----QAVIFLNTRR 284 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ LHGD ER + F+ G R LI TD+ AR Sbjct 285 KVDWLTEKM---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 335 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + Sbjct 336 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ET 390 Query 638 CYNTRLKE 645 YNT ++E Sbjct 391 FYNTTVEE 398 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 21/107 (20%), Positives = 41/107 (38%), Gaps = 9/107 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 + K+ Q + + A C Sbjct 95 LEIEFKETQ---------ALVLAPTRELAQQIQKVILALGDYMGATC 132 >sp|Q3SZ65|IF4A2_BOVIN Eukaryotic initiation factor 4A-II OS=Bos taurus OX=9913 GN=EIF4A2 PE=2 SV=1 Length=407 Score = 298 bits (763), Expect = 9e-93, Method: Composition-based stats. Identities = 116/428 (27%), Positives = 189/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F LK + L+ + +G E+ P G+ +++A G K+ + + Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSG-TGKTATFAISILQ 93 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 Q + +AL++ P+RELA+Q I Y+ IGG R+++ L+ Sbjct 94 QLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT---CHACIGGTNVRNEMQKLQA 150 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 IVVGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 151 EAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKL------ 204 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 +QV++ SAT+ + DV ++++K M P + +K E+ + + + V + +L Sbjct 205 NTSIQVVLLSATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKL-- 261 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 262 --------------------------------DTLCDLYETLTIT-----QAVIFLNTRR 284 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ LHGD ER + F+ G R LI TD+ AR Sbjct 285 KVDWLTEKM---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 335 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + Sbjct 336 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ET 390 Query 638 CYNTRLKE 645 YNT ++E Sbjct 391 FYNTTVEE 398 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 21/107 (20%), Positives = 41/107 (38%), Gaps = 9/107 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 + K+ Q + + A C Sbjct 95 LEIEFKETQ---------ALVLAPTRELAQQIQKVILALGDYMGATC 132 >sp|B2VG58|RHLB_ERWT9 ATP-dependent RNA helicase RhlB OS=Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99) OX=465817 GN=rhlB PE=3 SV=1 Length=430 Score = 299 bits (765), Expect = 9e-93, Method: Composition-based stats. Identities = 118/454 (26%), Positives = 185/454 (41%), Gaps = 73/454 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L F ++ G + Sbjct 13 DFALHPQVIEALETKGFHNCTPIQALALPFTLS--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 S + P N P+ALI+ P+RELA Q + + + L+ L G Sbjct 65 TS-TFHHLLSHPAPEGRQTNQPRALILAPTRELAVQIHADAEPLAQITG---LKLGLAYG 120 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G QL VLENGVD+++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 121 GDGYDKQLKVLENGVDVLIGTTGRLIDYAKQNHVNLGAIQVVVLDEADRMFDLGFIKDIR 180 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HV 444 + ++P + ++ SATL SF V++L+ + M+ +V+++ + + + Sbjct 181 WLFRRMPAAN----QRLNMLFSATL-SFRVRELAFENMNNAEYVEVEPDQKTGHRIKEEL 235 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 P N + RL + L I+E Sbjct 236 FYPSNEEKMRLLQTL-----------------------------------------IEEE 254 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 D+ IIF TK C+++ + G L GD +R + L+ F KG Sbjct 255 WPDRTIIFANTKHRCEDVWGHLAADG---------HRVGLLTGDVAQKKRLRILDDFTKG 305 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 DV L+ TDVAARG+ I V +V N LPD++++YVHRIGR GRA G +ISL E Sbjct 306 DVDILVATDVAARGLHIPAVTHVFNYDLPDDREDYVHRIGRTGRAGANGHSISLACEEYA 365 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + G +R D T +L Sbjct 366 LNLPAIEEYIGHSITVSRYNSDALMTDLPPPKRL 399 Score = 100 bits (250), Expect = 3e-21, Method: Composition-based stats. Identities = 58/353 (16%), Positives = 119/353 (34%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E + T IQA ++P L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVIEALETKGFHNCTPIQALALPFTLSGRDVAGQAQTGTGKTMAFLTSTFHH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + EG++ + + + + + + + G + Sbjct 71 LLSHPAP--EGRQTNQPRALILAPTRELAVQIH--------------ADAEPLAQITGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLENGV----------DVLIGTT---------------GRLIDYA 149 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAELK 239 ++ ++ + +D+ F KD+ F P N + EL Sbjct 150 KQNHVNLGAIQVVVLDEADRMFDLGFIKDIRWLFRRMPAANQRLNMLFSATLSFRVRELA 209 Query 240 F-NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSRE 297 F N E+ D + + + ++ QT P + +I ++ Sbjct 210 FENMNNAEYVEVEPDQKTGHRIKEELFY--PSNEEKMRLLQTLIEEEWPDRTIIFANTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ R L+ G VA + +L +L++ VDI+V T Sbjct 267 ------HRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILDDFTKGDVDILVAT 313 >sp|P0A9P8|DEAD_SHIFL ATP-dependent RNA helicase DeaD OS=Shigella flexneri OX=623 GN=deaD PE=3 SV=2 Length=629 Score = 305 bits (781), Expect = 1e-92, Method: Composition-based stats. Identities = 108/429 (25%), Positives = 176/429 (41%), Gaps = 69/429 (16%) Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 F DLGL I + + ++ + + +++ G Sbjct 4 FETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLN--------GRDVLGMAQTGSG 55 Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + AP+ L++ P+RELA Q + F K++ + + + Sbjct 56 KTAAFSL---PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRG--VNVVALY 110 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG QL L G IVVGTPGRL D + G L+LS++ LVLDEAD +L G+ + + Sbjct 111 GGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDV 170 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + QIP + Q + SAT+ +++++ + M P V ++ + + Sbjct 171 ETIMAQIP------EGHQTALFSATMPEA-IRRITRRFMKEPQEVRIQSSVTTRPDISQS 223 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + K E VR ++ Sbjct 224 YWTV----------------------------------------WGMRKNEALVRFLEAE 243 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 D AIIF RTK + + + G ++ L+GD R+Q LER K G Sbjct 244 DFDAAIIFVRTKNATLEVAEALERNG---------YNSAALNGDMNQALREQTLERLKDG 294 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + LI TDVAARG+D+ + V+N +P + ++YVHRIGR GRA R G A+ V + Sbjct 295 RLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRER 354 Query 625 KVWYHVCSS 633 ++ ++ + Sbjct 355 RLLRNIERT 363 Score = 114 bits (284), Expect = 6e-25, Method: Composition-based stats. Identities = 33/108 (31%), Positives = 56/108 (52%), Gaps = 9/108 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++ Sbjct 6 TTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLL 65 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 Q + LK Q + + + + + F+ G+ Sbjct 66 QNLDPELKAPQ---------ILVLAPTRELAVQVAEAMTDFSKHMRGV 104 >sp|P0A9P6|DEAD_ECOLI ATP-dependent RNA helicase DeaD OS=Escherichia coli (strain K12) OX=83333 GN=deaD PE=1 SV=2 Length=629 Score = 305 bits (781), Expect = 1e-92, Method: Composition-based stats. Identities = 108/429 (25%), Positives = 176/429 (41%), Gaps = 69/429 (16%) Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 F DLGL I + + ++ + + +++ G Sbjct 4 FETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLN--------GRDVLGMAQTGSG 55 Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + AP+ L++ P+RELA Q + F K++ + + + Sbjct 56 KTAAFSL---PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRG--VNVVALY 110 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG QL L G IVVGTPGRL D + G L+LS++ LVLDEAD +L G+ + + Sbjct 111 GGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDV 170 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + QIP + Q + SAT+ +++++ + M P V ++ + + Sbjct 171 ETIMAQIP------EGHQTALFSATMPEA-IRRITRRFMKEPQEVRIQSSVTTRPDISQS 223 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + K E VR ++ Sbjct 224 YWTV----------------------------------------WGMRKNEALVRFLEAE 243 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 D AIIF RTK + + + G ++ L+GD R+Q LER K G Sbjct 244 DFDAAIIFVRTKNATLEVAEALERNG---------YNSAALNGDMNQALREQTLERLKDG 294 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + LI TDVAARG+D+ + V+N +P + ++YVHRIGR GRA R G A+ V + Sbjct 295 RLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRER 354 Query 625 KVWYHVCSS 633 ++ ++ + Sbjct 355 RLLRNIERT 363 Score = 114 bits (284), Expect = 6e-25, Method: Composition-based stats. Identities = 33/108 (31%), Positives = 56/108 (52%), Gaps = 9/108 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++ Sbjct 6 TTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLL 65 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 Q + LK Q + + + + + F+ G+ Sbjct 66 QNLDPELKAPQ---------ILVLAPTRELAVQVAEAMTDFSKHMRGV 104 >sp|P0A9P7|DEAD_ECOL6 ATP-dependent RNA helicase DeaD OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=deaD PE=3 SV=2 Length=629 Score = 305 bits (781), Expect = 1e-92, Method: Composition-based stats. Identities = 108/429 (25%), Positives = 176/429 (41%), Gaps = 69/429 (16%) Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 F DLGL I + + ++ + + +++ G Sbjct 4 FETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLN--------GRDVLGMAQTGSG 55 Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + AP+ L++ P+RELA Q + F K++ + + + Sbjct 56 KTAAFSL---PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRG--VNVVALY 110 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG QL L G IVVGTPGRL D + G L+LS++ LVLDEAD +L G+ + + Sbjct 111 GGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDV 170 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + QIP + Q + SAT+ +++++ + M P V ++ + + Sbjct 171 ETIMAQIP------EGHQTALFSATMPEA-IRRITRRFMKEPQEVRIQSSVTTRPDISQS 223 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + K E VR ++ Sbjct 224 YWTV----------------------------------------WGMRKNEALVRFLEAE 243 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 D AIIF RTK + + + G ++ L+GD R+Q LER K G Sbjct 244 DFDAAIIFVRTKNATLEVAEALERNG---------YNSAALNGDMNQALREQTLERLKDG 294 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + LI TDVAARG+D+ + V+N +P + ++YVHRIGR GRA R G A+ V + Sbjct 295 RLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRER 354 Query 625 KVWYHVCSS 633 ++ ++ + Sbjct 355 RLLRNIERT 363 Score = 114 bits (284), Expect = 6e-25, Method: Composition-based stats. Identities = 33/108 (31%), Positives = 56/108 (52%), Gaps = 9/108 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++ Sbjct 6 TTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLL 65 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 Q + LK Q + + + + + F+ G+ Sbjct 66 QNLDPELKAPQ---------ILVLAPTRELAVQVAEAMTDFSKHMRGV 104 >sp|Q8XA87|DEAD_ECO57 ATP-dependent RNA helicase DeaD OS=Escherichia coli O157:H7 OX=83334 GN=deaD PE=3 SV=3 Length=629 Score = 305 bits (781), Expect = 1e-92, Method: Composition-based stats. Identities = 108/429 (25%), Positives = 176/429 (41%), Gaps = 69/429 (16%) Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 F DLGL I + + ++ + + +++ G Sbjct 4 FETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLN--------GRDVLGMAQTGSG 55 Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + AP+ L++ P+RELA Q + F K++ + + + Sbjct 56 KTAAFSL---PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRG--VNVVALY 110 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG QL L G IVVGTPGRL D + G L+LS++ LVLDEAD +L G+ + + Sbjct 111 GGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDV 170 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + QIP + Q + SAT+ +++++ + M P V ++ + + Sbjct 171 ETIMAQIP------EGHQTALFSATMPEA-IRRITRRFMKEPQEVRIQSSVTTRPDISQS 223 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + K E VR ++ Sbjct 224 YWTV----------------------------------------WGMRKNEALVRFLEAE 243 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 D AIIF RTK + + + G ++ L+GD R+Q LER K G Sbjct 244 DFDAAIIFVRTKNATLEVAEALERNG---------YNSAALNGDMNQALREQTLERLKDG 294 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + LI TDVAARG+D+ + V+N +P + ++YVHRIGR GRA R G A+ V + Sbjct 295 RLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRER 354 Query 625 KVWYHVCSS 633 ++ ++ + Sbjct 355 RLLRNIERT 363 Score = 114 bits (284), Expect = 6e-25, Method: Composition-based stats. Identities = 33/108 (31%), Positives = 56/108 (52%), Gaps = 9/108 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ I +A+ ++ + P+ IQAE IP +L G DVL A+TGSGKT AFS+P++ Sbjct 6 TTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLL 65 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 Q + LK Q + + + + + F+ G+ Sbjct 66 QNLDPELKAPQ---------ILVLAPTRELAVQVAEAMTDFSKHMRGV 104 >sp|Q4R4Y9|IF4A2_MACFA Eukaryotic initiation factor 4A-II OS=Macaca fascicularis OX=9541 GN=EIF4A2 PE=2 SV=1 Length=408 Score = 298 bits (762), Expect = 1e-92, Method: Composition-based stats. Identities = 117/428 (27%), Positives = 190/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F LK + L+ + +G E+ P G+ +++A G K+ + + Sbjct 36 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSG-TGKTATFAISILQ 94 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 Q + +AL++ P+RELA+Q I Y+ IGG R+++ L+ Sbjct 95 QLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGAT---CHACIGGTNVRNEMQKLQA 151 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 IVVGTPGR+ D+++ L+ ++ VLDEADG+LS+G+ D I + ++ Sbjct 152 EAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQIYEIFQKL------ 205 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 +QV++ SAT+ + DV ++++K M P + +K E+ + + + V + +L Sbjct 206 NTSIQVVLLSATMPT-DVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKL-- 262 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 263 --------------------------------DTLCDLYETLTIT-----QAVIFLNTRR 285 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ LHGD ER + F+ G R LI TD+ AR Sbjct 286 KVDWLTEKM---------HARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 336 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI+ V E +++ + + Sbjct 337 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI-----ET 391 Query 638 CYNTRLKE 645 YNT ++E Sbjct 392 FYNTTVEE 399 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 21/107 (20%), Positives = 41/107 (38%), Gaps = 9/107 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I ++Q Sbjct 36 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 95 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 + K+ Q + + A C Sbjct 96 LEIEFKETQ---------ALVLAPTRELAQQIQKVILALGDYMGATC 133 >sp|Q6FW42|DRS1_CANGA ATP-dependent RNA helicase DRS1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DRS1 PE=3 SV=1 Length=725 Score = 307 bits (787), Expect = 1e-92, Method: Composition-based stats. Identities = 102/506 (20%), Positives = 195/506 (39%), Gaps = 67/506 (13%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K DL L+ + + N +++A + +A + G Sbjct 206 KTFNDLALSRPVMKGLSNLGYVKPSPIQSATIPIAL--------LGKDIIAGAVTGSGKT 257 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + + +++ P+RELA Q + K+ +++ N L L +GG Sbjct 258 AAFMIPIIERLLYKPAKVASTRVIVLTPTRELAIQVADVGKKIGQFVSN--LTFGLAVGG 315 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + R Q +L+ DIV+ TPGR D + ++ N+ V LV+DEAD +L G+ D +N Sbjct 316 LNLRQQEQMLKTRPDIVIATPGRFIDHIRNSASFNVDSVEVLVIDEADRMLEDGFQDELN 375 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + +P + Q ++ SAT++S +K+L + P + + + Sbjct 376 EIMSLLP------SKRQTLLFSATMNSR-IKQLISLSLKRPVRIMIDPPKQAATKLTQEF 428 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + + L +R + + Sbjct 429 VRIRKRDHLKPSLLFN-----------------------------------LIRKLDPNG 453 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + ++F K L G + LHG +R ++ +FK Sbjct 454 QKRIVVFVARKDMAHKLRIILGLLG---------MAVAELHGSLTQEQRLDSVNKFKSLQ 504 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V LICTD+A+RG+DI + VIN +P + Y+HR+GR RA R G +I+ V + Sbjct 505 VPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSITFVGEASAE 564 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + RG + G + +N+++ ++I E+++ T+ + + K Sbjct 565 RSIVKDAIRGVNDSEIPGSKAVGRNVDWNQVEETNKIVENMDQTVQDILVEEKEE----- 619 Query 686 GKVTYGQKRAAGGGSYKGHVDILAPT 711 ++ + G + H D + Sbjct 620 KEILRAEMELKKGENLLKHKDEIQSR 645 Score = 101 bits (252), Expect = 5e-21, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 6/108 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++ + + + + + ++ P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I Sbjct 206 KTFNDLALSRPVMKGLSNLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPII 265 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + K +T + + + D G L Sbjct 266 ERLLYKP------AKVASTRVIVLTPTRELAIQVADVGKKIGQFVSNL 307 >sp|A5DKW3|DRS1_PICGU ATP-dependent RNA helicase DRS1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DRS1 PE=3 SV=2 Length=705 Score = 307 bits (786), Expect = 1e-92, Method: Composition-based stats. Identities = 113/542 (21%), Positives = 210/542 (39%), Gaps = 73/542 (13%) Query 199 DKGHVKFSKNGKDLGLA----FEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG 254 D+ + S+N +D A +E + F A L LK G + P Sbjct 167 DEQEQEISENDEDSAAAIAEFYEESKTTEKITSFQALQLSRPLLK-GVGNLGYTVPSAIQ 225 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLP------------NAPKALIVEPSRELAEQT 302 ++ A G + + + T +P +A + +++ P+RELA Q Sbjct 226 AASIPIAMMGKDIVAGAVTGSGKTAAYLIPIIERLIYKPAAVSATRVIVLTPTRELAIQV 285 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNL 361 + K+ +++ N L L +GG+ R Q L++ DIVV TPGRL D + ++ ++ Sbjct 286 CDVGKKLGQFVAN--LNFGLAVGGLNLRQQEQQLKSRPDIVVATPGRLIDHIRNSPSFSI 343 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 + LV+DEAD +L +G+ + + IP+ + Q ++ SAT+++ ++ L + Sbjct 344 ENLEVLVMDEADRMLEEGFQVELTEILELIPK-----HKRQTMLFSATMNT-KIQDLIQL 397 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 + P + + + V + + L Sbjct 398 SLDKPVRIMVNPPKQAASKLVQEFVRIRKREHLKPALL---------------------- 435 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + +R + + ++ ++F K L G Sbjct 436 -------------YHLLRLVDPQQQNRIVVFVSRKEMAHRLRIVLGLLG---------MK 473 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 LHG +R Q+++ F+ V LICTD+AARG+DI + VIN +P + Y+H Sbjct 474 VSELHGSLTQEQRLQSVKDFRSLAVPVLICTDLAARGLDIPKIEIVINFDMPKTHEIYLH 533 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R+GR RA R G +I+ V + + K + + T+ + +++ L+ Sbjct 534 RVGRTARAGREGRSITFVGESNQD--RSIVKDAIKSLEEQKNGKAVSRTVDWKKVEELNS 591 Query 662 IEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKE 721 I E TI +V + K + ++ + + H Q +K+ Sbjct 592 IVESKKDTIDEVLEEEKSAKEILQAEMQLEKASNIMKHEKEIHSRPKRTWFQS-EQEKKQ 650 Query 722 AQ 723 AQ Sbjct 651 AQ 652 Score = 98.3 bits (243), Expect = 8e-20, Method: Composition-based stats. Identities = 26/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F + + + + V + + +P+ IQA SIP+ + G D++ A TGSGKT A+ IP+ Sbjct 197 ITSFQALQLSRPLLKGVGNLGYTVPSAIQAASIPIAMMGKDIVAGAVTGSGKTAAYLIPI 256 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 I+ + T + + + D G L Sbjct 257 IERLIYKPAAV------SATRVIVLTPTRELAIQVCDVGKKLGQFVANL 299 >sp|B5BIS9|RHLB_SALPK ATP-dependent RNA helicase RhlB OS=Salmonella paratyphi A (strain AKU_12601) OX=554290 GN=rhlB PE=3 SV=1 Length=421 Score = 298 bits (763), Expect = 1e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKGFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRVPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 99.8 bits (247), Expect = 6e-21, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRVPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|Q0HQL1|RHLB_SHESR ATP-dependent RNA helicase RhlB OS=Shewanella sp. (strain MR-7) OX=60481 GN=rhlB PE=3 SV=1 Length=439 Score = 298 bits (764), Expect = 1e-92, Method: Composition-based stats. Identities = 108/450 (24%), Positives = 179/450 (40%), Gaps = 71/450 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL L E+ + ++ L ++ G + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGKTMA 62 Query 269 SQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + T N P+A+I+ P+RELA Q + K+ L+ ++ Sbjct 63 FLVATFNHLLSTPIPENRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTH---LKVGIVY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + Q VL+ GVDI++GT GR+ D V G ++L+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIISLNAIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P + + ++ SATL S V++L+ M+ P V++ E+ + Sbjct 180 RFLFRRMP----NADQRLNMLFSATL-SMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P RL + I+E Sbjct 235 IFYPSQEDKIRL-----------------------------------------LLTLIEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 ++AI+F TK C+NL + +G L GD +R + LE+F + Sbjct 254 DWPEKAIVFSNTKHSCENLWSWL---------EGDGHRVGLLTGDVPQKKRIRILEQFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G+++S E Sbjct 305 GQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEEY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + S + D Sbjct 365 ALNLPAIESYINHSIPVSNYDRDALLDDIP 394 Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats. Identities = 62/353 (18%), Positives = 119/353 (34%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T E ++ + + + + + L Sbjct 71 LLSTP--IPENRQLNQPRAIIMAPTRELAIQI-AKDAILLAKHTHLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V DQG+ + +GT + G S N Sbjct 116 ---GIVYGGESYDVQRKVLDQGV----------DILIGTTGRIIDYVRQGIISLN----- 157 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAE 237 + +D+ F KD+ F P+ N +K E Sbjct 158 ---AIQA-------VVLDEADRMFDLGFIKDIRFLFRRMPNADQRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ + K + SQ + KA++ ++ Sbjct 208 LAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKIRLLLTLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVAT 313 >sp|Q0HN76|RHLB_SHESM ATP-dependent RNA helicase RhlB OS=Shewanella sp. (strain MR-4) OX=60480 GN=rhlB PE=3 SV=1 Length=439 Score = 298 bits (764), Expect = 1e-92, Method: Composition-based stats. Identities = 108/450 (24%), Positives = 179/450 (40%), Gaps = 71/450 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL L E+ + ++ L ++ G + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGKTMA 62 Query 269 SQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + T N P+A+I+ P+RELA Q + K+ L+ ++ Sbjct 63 FLVATFNHLLSTPIPENRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTH---LKVGIVY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + Q VL+ GVDI++GT GR+ D V G ++L+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIISLNAIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P + + ++ SATL S V++L+ M+ P V++ E+ + Sbjct 180 RFLFRRMP----NADQRLNMLFSATL-SMKVQELAYDHMNDPVKVEIAPEEKTSKNIKEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P RL + I+E Sbjct 235 IFYPSQEDKIRL-----------------------------------------LLTLIEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 ++AI+F TK C+NL + +G L GD +R + LE+F + Sbjct 254 DWPEKAIVFSNTKHSCENLWSWL---------EGDGHRVGLLTGDVPQKKRIRILEQFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G+++S E Sbjct 305 GQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEEY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + S + D Sbjct 365 ALNLPAIESYINHSIPVSNYDRDALLDDIP 394 Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats. Identities = 62/353 (18%), Positives = 119/353 (34%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T E ++ + + + + + L Sbjct 71 LLSTP--IPENRQLNQPRAIIMAPTRELAIQI-AKDAILLAKHTHLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G Y+V DQG+ + +GT + G S N Sbjct 116 ---GIVYGGESYDVQRKVLDQGV----------DILIGTTGRIIDYVRQGIISLN----- 157 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAE 237 + +D+ F KD+ F P+ N +K E Sbjct 158 ---AIQA-------VVLDEADRMFDLGFIKDIRFLFRRMPNADQRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ + K + SQ + KA++ ++ Sbjct 208 LAYDHMNDPVKVEIAPEEKTSKNIKEEIFYPSQEDKIRLLLTLIEEDWPEKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ------HSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVAT 313 >sp|Q6YS30|RH5_ORYSJ DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0301200 PE=2 SV=1 Length=512 Score = 301 bits (770), Expect = 1e-92, Method: Composition-based stats. Identities = 113/477 (24%), Positives = 194/477 (41%), Gaps = 79/477 (17%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNA------------ 275 F A L L G E + L D + + SG Sbjct 96 FAATALPPQVLDCCKGFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVR 155 Query 276 -QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 ++ + P+ L++ P+RELA+Q + + + + + + GG + Q+S Sbjct 156 RKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCEAGAPCG---ISSVCLYGGTSKGPQIS 212 Query 335 VLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L++GVDIV+GTPGR+ DL+ G L+ V F+VLDEAD +L G+ + + +Q Sbjct 213 ALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQ---- 268 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIM-HFPTWVDLKGEDSVPD-TVHHVVVPVN--P 450 Q ++ SAT V +L+++ M P V + ED + V +V ++ Sbjct 269 --TASVRQTVMFSATWPPA-VHQLAQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRS 325 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 + RL L K H + + ++ + Sbjct 326 RDSRLVALLDKYH---------------------------------------KAQRNRVL 346 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 +F K + +E ++G +S V +HGD+ H+R + L FK+G +I Sbjct 347 VFVLYKREATRVETMLQRRG---------WSAVSVHGDKAQHDRTKALSLFKEGSCPLMI 397 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 TDVA+RG+DI V VIN + P ++YVHRIGR GRA + G+A + E + + + Sbjct 398 ATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGEL 457 Query 631 CSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE-EHLNCTISQVEPDIKVPVDEFDG 686 + + ++ + + S+I H + K+ + D Sbjct 458 VNVLREAG---QVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPKSTKITFGDSDE 511 Score = 96.7 bits (239), Expect = 1e-19, Method: Composition-based stats. Identities = 30/146 (21%), Positives = 55/146 (38%), Gaps = 9/146 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F+ + P++ + + P+ IQA + P +L G D + A TGSGKT AF +P Sbjct 93 LSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPA 150 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 + V + ++ K S + D + G C V + Sbjct 151 LMHVRRKMGEK--SAKKGVPRVLVLSPTRELAQQIADV-----LCEAGAPCGISSVCLYG 203 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCR 146 G + K ++ G + Sbjct 204 GTSKGPQISALKSGVDIVIGTPGRMK 229 >sp|B5FN74|RHLB_SALDC ATP-dependent RNA helicase RhlB OS=Salmonella dublin (strain CT_02021853) OX=439851 GN=rhlB PE=3 SV=1 Length=421 Score = 298 bits (762), Expect = 2e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 186/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + + ++ L ++ G + Sbjct 13 DFALHPQVVEALEKKRFYNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAA----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + S G ++ + ++L Sbjct 367 NLPAIESYIGHSIPVSKYNPEALMNDLPKPLRL 399 Score = 96.4 bits (238), Expect = 7e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPQVVEALEKKRFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPAAQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|A6VKC3|RHLB_ACTSZ ATP-dependent RNA helicase RhlB OS=Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z) OX=339671 GN=rhlB PE=3 SV=1 Length=413 Score = 297 bits (761), Expect = 2e-92, Method: Composition-based stats. Identities = 112/448 (25%), Positives = 183/448 (41%), Gaps = 67/448 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL L +I + +Q ++ L ++ G + Sbjct 11 FADLPLHPQILAALNDQNFEYCTPIQALSLPLTL--------QGKDVAGQAQTGTGKTMA 62 Query 269 SQHSGNAQVT--QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + + Q F+ N P+ALI+ P+RELA Q ++ + + KLR L GG Sbjct 63 FLTATFHHLLTHQPDFITNQPRALILAPTRELAVQIAHDAESLAQ---TTKLRIALAYGG 119 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL +ENGVDI++GT GR+ D V G + + ++ +VLDEAD + G+ I Sbjct 120 DGYDKQLKTIENGVDILIGTTGRVIDYVKQGIIRFNDIQVVVLDEADRMFDLGFIKDIRY 179 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + + P K ++ SATL S+ V++L+ + M+ P +++++ Sbjct 180 LLRKCPA----PKSRLTMLFSATL-SYKVRELAFEDMNDPEYIEIE-------------- 220 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 P+ R+ E L R K + ++E Sbjct 221 PLQKTGHRIKEELFYPSNRD--------------------------KMALLMTLLEEEWP 254 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 ++ IIF TK C+ + Y G L GD +R L++F G++ Sbjct 255 ERCIIFANTKHRCEEIWGYLAADGQ---------RVGLLTGDVAQKKRLALLKQFTDGEL 305 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 L+ TDVAARG+ I V +V N LPD++++YVHRIGR GRA G++IS + Sbjct 306 DILVATDVAARGLHIPDVTHVFNYDLPDDREDYVHRIGRTGRAGESGMSISFACEQYAMN 365 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 + G ++ D Sbjct 366 LPAIEEYIGHHIPVSQYDPDSLINDLPK 393 Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats. Identities = 60/353 (17%), Positives = 111/353 (31%), Gaps = 62/353 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + P+I A+ + ++ T IQA S+PL L G DV A+TG+GKT AF Sbjct 11 FADLPLHPQILAALNDQNFEYCTPIQALSLPLTLQGKDVAGQAQTGTGKTMAFLTATFHH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + Q + + + + + + + R Sbjct 71 LLTH----QPDFITNQPRALILAPTRELAVQ--------------IAHDAESLAQTTKLR 112 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + G N Sbjct 113 IALAYGGDGYDKQLKTIENGV----------DILIGTTGRVIDYVKQGIIRFN------- 155 Query 184 EEFTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFN 241 D LD + F K+ + L P K EL F Sbjct 156 ------DIQVVVLDEADRMFDLGFIKDIRYLLRKCPAPKSRLTMLFSATLSYKVRELAF- 208 Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVK-SQHSGNAQVTQTKFLPNA---PKALIVEPSRE 297 E+ P L K + S ++ L + +I ++ Sbjct 209 ---EDMNDPEYIEIEPLQKTGHRIKEELFYPSNRDKMALLMTLLEEEWPERCIIFANTK- 264 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ Y+ R L+ G VA + +L++L+ +DI+V T Sbjct 265 ------HRCEEIWGYLAADGQRVGLLTGDVAQKKRLALLKQFTDGELDILVAT 311 >sp|A6SCT6|DBP3_BOTFB ATP-dependent RNA helicase dbp3 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp3 PE=3 SV=1 Length=592 Score = 303 bits (776), Expect = 2e-92, Method: Composition-based stats. Identities = 115/426 (27%), Positives = 183/426 (43%), Gaps = 62/426 (15%) Query 216 FEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI-VKSQHSGN 274 ++ F + + + F + + P + A I V SG Sbjct 177 LSTSATLRPLTKFDYLPITDPAQRAPFKDFKAPTPIQAAAWPFLLAGRDVIGVAETGSGK 236 Query 275 AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 + P+A++V P+RELA Q+ I + K L + + GGV +Q+ Sbjct 237 TMAFAVPCINKGPRAVVVSPTRELAMQSYEQIVKLAK---ASGLECVCVYGGVPKDEQIR 293 Query 335 VLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L+ DIVV TPGRL+DL++ G +LS+ R++VLDEAD +L +G+ + I ++ N P + Sbjct 294 ALKT-ADIVVATPGRLNDLINQGCADLSKARYVVLDEADRMLDKGFEEEIRKIINTTPSL 352 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK----GEDSVPDTVHHVVVPVNP 450 + Q ++ +AT V++L+ M P + + G+ + V V P Sbjct 353 G----KRQTLMFTATWP-ESVRELAATFMTSPVKIAIGDNPTGDLRANSRIVQKVEVVEP 407 Query 451 --KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K RL + L + K D+ Sbjct 408 RDKEYRLMQLLKQ-------------------------------------YQSGSQKDDR 430 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 ++FC K + +E + Q+G F +HGD +R ++LE FK G+ Sbjct 431 ILVFCLYKKEATRVESFIRQKG---------FRVAGIHGDLSQEQRTRSLEAFKSGNTPV 481 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+DI V VIN T P ++YVHRIGR GRA + GLAI+L + Sbjct 482 LVATDVAARGLDIPAVKLVINCTFPLTVEDYVHRIGRTGRAGKDGLAITLFTEHDKAQSG 541 Query 629 HVCSSR 634 + + Sbjct 542 ALINVL 547 Score = 92.5 bits (228), Expect = 3e-18, Method: Composition-based stats. Identities = 38/141 (27%), Positives = 54/141 (38%), Gaps = 26/141 (18%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F + + +A + D+ PT IQA + P +L G DV+ AETGSGKT AF++P Sbjct 186 LTKFDYLPITDPAQRAPFK-DFKAPTPIQAAAWPFLLAGRDVIGVAETGSGKTMAFAVPC 244 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 I K S + M Y++ A S C Sbjct 245 I---------------NKGPRAVVVSPTRELAMQSYEQIVKLAKASGLECVCVYGGVPKD 289 Query 112 -QSREVKEWHGCRATKGLMKG 131 Q R +K AT G + Sbjct 290 EQIRALKTADIVVATPGRLND 310 >sp|Q2UHC1|DBP10_ASPOR ATP-dependent RNA helicase dbp10 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp10 PE=3 SV=1 Length=929 Score = 312 bits (798), Expect = 2e-92, Method: Composition-based stats. Identities = 121/485 (25%), Positives = 194/485 (40%), Gaps = 36/485 (7%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTK 281 +K F A L NA L + F P + DG V + T Sbjct 85 VKKGGGFQAMGL-NAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAF 143 Query 282 FLPN-----------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 +P + LI+ PSRELA QTL +K+ K L+ +L++GG + Sbjct 144 VIPMIEKLKSHSTKVGARGLILSPSRELALQTLKVVKELGK---GTDLKSVLLVGGDSLE 200 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 +Q S++ DIV+ TPGR L L+LS +R++V DEAD L G++D + + Sbjct 201 EQFSLMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGFADQLTEILYG 260 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 +P Q ++ SATL V+ + + PT + L E + + +V V Sbjct 261 LPA------NRQTLLFSATLPKSLVE-FARAGLQEPTLIRLDTESKISPDLENVFFSVKS 313 Query 451 --KTDRLWERLGK-SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 K L L + + T A + + + + + A+ + Sbjct 314 SEKEGALLHILHEVIKMPTGPTEAAQRQKEQGDGKNFKNFKKRKRGDDKAINFQESPTKY 373 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 I+F TK D L + G F+ +G RK ++ F+ G Sbjct 374 STIVFAATKHHVDYLYSLLREAG---------FAVSYAYGSLDQTARKIQVQNFRAGLSN 424 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARGIDI + VIN P + + +VHR+GR RA R G + SLV Sbjct 425 ILVVTDVAARGIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDADAPYM 484 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + G+ R E G + ++ + S + L+ + V ++ D + + Sbjct 485 LDLQLFLGRRLVIGR--EHGDQVNFAEDVVVGSLPRDGLSTSCEWVTKVLENEADIYSQR 542 Query 688 VTYGQ 692 G+ Sbjct 543 TIAGK 547 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 31/104 (30%), Positives = 50/104 (48%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IP+I+ G DV+ A TGSGKT AF IP+I+ Sbjct 91 FQAMGLNAHLLKAITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAFVIPMIEK 150 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + G +G S + + G+D Sbjct 151 LKSH--STKVGARG-----LILSPSRELALQTLKVVKELGKGTD 187 >sp|Q0D1K3|PRP5_ASPTN Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=prp5 PE=3 SV=1 Length=1181 Score = 316 bits (809), Expect = 2e-92, Method: Composition-based stats. Identities = 105/458 (23%), Positives = 191/458 (42%), Gaps = 90/458 (20%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLN 304 + ++K G V + + L N P LI+ P+RELA Q Sbjct 581 PAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHK 640 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNL 361 + K F K ++ LR + GG +DQ++ L+ G +IVV TPGR+ DL++ NL Sbjct 641 DCKPFLKALN---LRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNL 697 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 +V ++VLDEAD + G+ + ++ + Q ++ SAT +++ L+ K Sbjct 698 RRVTYVVLDEADRMFDMGFEPQVMKIMANV------RPDRQTVLFSATFP-RNMEALARK 750 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 ++ P + + G+ V + +V N Sbjct 751 TLNKPVEIVVGGKSVVAPEITQIVEVRNED------------------------------ 780 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + +++L+ + + E++ +A+IF + D L + +++G + Sbjct 781 ----KKFVRLLELLGNLYSSDENEDARALIFVERQEAADTLLRELMRKG---------YP 827 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 C+ +HG + +R +E FK G LI T VAARG+D+ + V+N P+ ++YVH Sbjct 828 CMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVH 887 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R GR GRA G A++ + ++E+ + + Sbjct 888 RAGRTGRAGNTGTAVTFLTEDQERFSVDIAKA---------------------------- 919 Query 662 IEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGG 699 L + +V ++ VD F KV G+++A+ G Sbjct 920 ----LKQSGQKVPEPVQQMVDSFLEKVKAGKEKASASG 953 Score = 109 bits (271), Expect = 5e-23, Method: Composition-based stats. Identities = 61/374 (16%), Positives = 131/374 (35%), Gaps = 53/374 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ + ++ + + PT IQ+++IP I+ G DV+ A+TGSGKT AF IP+ Sbjct 548 VQKWSQCGLGVQTLDVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPM 607 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF--AIGSDGLCCQSREVKE 118 + + KDQ+ + + I + + + F A+ +C + Sbjct 608 FRHI----KDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 663 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQ 178 +G E+ G + A + + + + Sbjct 664 DQIAELKRGA-------EIVVCTPGRM-IDLLAANAGRVTNLRRVTYVVLDEADRMFDMG 715 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAEL 238 F+ + + + D+ V FS + + L N + Sbjct 716 FEPQVMKIMAN------VRPDRQTVLFSATF------PRNMEALARKTL-------NKPV 756 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 + G + P V + ++ + GN + + +A +ALI +E Sbjct 757 EIVVGGKSVVAPEITQIVEVRNEDKKFVRLLELLGN--LYSSDENEDA-RALIFVERQEA 813 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGG---VAARDQLSVLENGV-DIVVGTPGRLDDLV 354 A+ + + + I GG + + + G+ +++ T V Sbjct 814 AD-------TLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT------SV 860 Query 355 STGKLNLSQVRFLV 368 + L++ Q++ +V Sbjct 861 AARGLDVKQLKLVV 874 >sp|Q9HXE5|RHLB_PSEAE ATP-dependent RNA helicase RhlB OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rhlB PE=3 SV=1 Length=397 Score = 297 bits (760), Expect = 2e-92, Method: Composition-based stats. Identities = 112/448 (25%), Positives = 181/448 (40%), Gaps = 74/448 (17%) Query 195 YLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG 254 ++ +G +F D LA + + + ++ L F ++ Sbjct 1 MVEPQEGKTRF----HDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQD-------- 48 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFK 310 + ++ G S Q+ QT P+ALI+ P+REL Q + Sbjct 49 AIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALT 108 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 KY L + +GG+ QL LE DI+V TPGRL D G+++L V +VL Sbjct 109 KYTG---LNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVL 165 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD +L G+ + ++ Q P Q ++ SAT DV L+++ P V Sbjct 166 DEADRMLDMGFIPQVRQIIRQTPH----KGERQTLLFSATFTD-DVMNLAKQWTVDPAIV 220 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 +++ E+ DTV V V Sbjct 221 EIEPENVASDTVEQHVYAVAGSD------------------------------------- 243 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K + + ++ ++ ++F K + +E+ + G S + GD Sbjct 244 ---KYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDG---------ISAAQMSGDV 291 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 H+R + LE F++G +R L+ TDVA RGI I G+ +VIN TLP++ +YVHRIGR GRA Sbjct 292 PQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRA 351 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKG 637 G +IS + + G+ Sbjct 352 GASGTSISFAGEDDAFALPPIEELLGRK 379 Score = 90.6 bits (223), Expect = 5e-18, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 42/94 (45%), Gaps = 2/94 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P + A+ ++ + T IQA+ + L G D + A+TG+GKT AF I +I Sbjct 9 TRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISII 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 + +T ++ + + + + Sbjct 69 TQLLQTPPPKE--RYMGEPRALIIAPTRELVVQI 100 >sp|Q02S21|RHLB_PSEAB ATP-dependent RNA helicase RhlB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=rhlB PE=3 SV=1 Length=397 Score = 297 bits (760), Expect = 2e-92, Method: Composition-based stats. Identities = 112/448 (25%), Positives = 181/448 (40%), Gaps = 74/448 (17%) Query 195 YLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG 254 ++ +G +F D LA + + + ++ L F ++ Sbjct 1 MVEPQEGKTRF----HDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQD-------- 48 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFK 310 + ++ G S Q+ QT P+ALI+ P+REL Q + Sbjct 49 AIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALT 108 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 KY L + +GG+ QL LE DI+V TPGRL D G+++L V +VL Sbjct 109 KYTG---LNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVL 165 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD +L G+ + ++ Q P Q ++ SAT DV L+++ P V Sbjct 166 DEADRMLDMGFIPQVRQIIRQTPH----KGERQTLLFSATFTD-DVMNLAKQWTVDPAIV 220 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 +++ E+ DTV V V Sbjct 221 EIEPENVASDTVEQHVYAVAGSD------------------------------------- 243 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K + + ++ ++ ++F K + +E+ + G S + GD Sbjct 244 ---KYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDG---------ISAAQMSGDV 291 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 H+R + LE F++G +R L+ TDVA RGI I G+ +VIN TLP++ +YVHRIGR GRA Sbjct 292 PQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRA 351 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKG 637 G +IS + + G+ Sbjct 352 GASGTSISFAGEDDAFALPPIEELLGRK 379 Score = 90.6 bits (223), Expect = 5e-18, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 42/94 (45%), Gaps = 2/94 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P + A+ ++ + T IQA+ + L G D + A+TG+GKT AF I +I Sbjct 9 TRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISII 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 + +T ++ + + + + Sbjct 69 TQLLQTPPPKE--RYMGEPRALIIAPTRELVVQI 100 >sp|B7UUT0|RHLB_PSEA8 ATP-dependent RNA helicase RhlB OS=Pseudomonas aeruginosa (strain LESB58) OX=557722 GN=rhlB PE=3 SV=1 Length=397 Score = 297 bits (760), Expect = 2e-92, Method: Composition-based stats. Identities = 112/448 (25%), Positives = 181/448 (40%), Gaps = 74/448 (17%) Query 195 YLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG 254 ++ +G +F D LA + + + ++ L F ++ Sbjct 1 MVEPQEGKTRF----HDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQD-------- 48 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFK 310 + ++ G S Q+ QT P+ALI+ P+REL Q + Sbjct 49 AIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALT 108 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 KY L + +GG+ QL LE DI+V TPGRL D G+++L V +VL Sbjct 109 KYTG---LNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDFNQRGEVHLDMVEVMVL 165 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD +L G+ + ++ Q P Q ++ SAT DV L+++ P V Sbjct 166 DEADRMLDMGFIPQVRQIIRQTPH----KGERQTLLFSATFTD-DVMNLAKQWTVDPAIV 220 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 +++ E+ DTV V V Sbjct 221 EIEPENVASDTVEQHVYAVAGSD------------------------------------- 243 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K + + ++ ++ ++F K + +E+ + G S + GD Sbjct 244 ---KYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDG---------ISAAQMSGDV 291 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 H+R + LE F++G +R L+ TDVA RGI I G+ +VIN TLP++ +YVHRIGR GRA Sbjct 292 PQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRA 351 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKG 637 G +IS + + G+ Sbjct 352 GASGTSISFAGEDDAFALPPIEELLGRK 379 Score = 90.6 bits (223), Expect = 5e-18, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 42/94 (45%), Gaps = 2/94 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P + A+ ++ + T IQA+ + L G D + A+TG+GKT AF I +I Sbjct 9 TRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISII 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 + +T ++ + + + + Sbjct 69 TQLLQTPPPKE--RYMGEPRALIIAPTRELVVQI 100 >sp|Q87KH5|RHLB_VIBPA ATP-dependent RNA helicase RhlB OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=rhlB PE=3 SV=1 Length=437 Score = 298 bits (763), Expect = 2e-92, Method: Composition-based stats. Identities = 112/419 (27%), Positives = 181/419 (43%), Gaps = 71/419 (17%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DLGL ++ ++ + ++ L ++ ++ G + Sbjct 11 FADLGLQPQVTEGLEKKGFEYCTPIQALALPVLLTGQD--------IAGQAQTGTGKTLA 62 Query 269 SQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + T P P+A+I+ P+RELA Q N+ + I + L+ L Sbjct 63 FLTATFNHLLTTPEHEGRQPTQPRAIIMAPTRELAIQIFNDAEPL---IASTGLKAALAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + QL+ L++GVDI++GT GR+ D NL+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDKQLAKLQDGVDILIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P+ K ++ SATL S+ V++L+ + MH P V ++ + Sbjct 180 RFLFRRMPE----PKERLNMLFSATL-SYRVQELAFEHMHNPEHVVVEPAQKTGHRIQEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N L + L I+E Sbjct 235 LFYPSNEDKMALLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AI+F TK C+++ + G L GD +R++ LE+F K Sbjct 254 EWPDRAIVFANTKHKCESVWGHLAADG---------HRVGLLTGDVPQKKREKILEQFTK 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 GDV L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 305 GDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEE 363 Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats. Identities = 56/352 (16%), Positives = 118/352 (34%), Gaps = 58/352 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLQPQVTEGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T + EG++ + + + ++ + + G + Sbjct 71 LLTTP--EHEGRQPTQPRAIIMAPTRELAIQIFN--------------DAEPLIASTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A + +++ G+ + +GT + D Y Sbjct 115 AALAYGGESYDKQLAKLQDGV----------DILIGTTG--------------RIIDFYK 150 Query 184 EE-FTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAEL 238 + F +++ LD + F KD+ F P N + EL Sbjct 151 QRVFNLNNIQAVVLD--EADRMFDLGFIKDIRFLFRRMPEPKERLNMLFSATLSYRVQEL 208 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 F + + + S A + +A++ ++ Sbjct 209 AFEHMHNPEHVVVEPAQKTGHRIQEELFYPSNEDKMALLQTLIEEEWPDRAIVFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ R L+ G V + + +LE VDI+V T Sbjct 267 -----HKCESVWGHLAADGHRVGLLTGDVPQKKREKILEQFTKGDVDILVAT 313 >sp|O25029|RHPA_HELPY DEAD-box ATP-dependent RNA helicase RhpA OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=rhpA PE=1 SV=1 Length=492 Score = 300 bits (768), Expect = 2e-92, Method: Composition-based stats. Identities = 102/473 (22%), Positives = 190/473 (40%), Gaps = 67/473 (14%) Query 228 FPACVLKNAELKFNF--GEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN 285 F LK + LK + G + A+ + D +G + N Sbjct 22 FNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIINN 81 Query 286 -----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 +AL++ P+RELA Q + I + K+ + + + + GG + + Q ++ Sbjct 82 LKNNHTIEALVITPTRELAMQISDEIFKLGKH---TRTKTVCVYGGQSVKKQCEFIKKNP 138 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 +++ TPGRL D + +++ + +VLDE+D +L G+ D I + + +P Sbjct 139 QVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEA----- 193 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 Q+++ SAT+ +K+L++KI+ P + + + + +N Sbjct 194 -QILLFSATMPEP-IKRLADKILENPIKIHIAPSNITNTDITQRFYVINEHE-------- 243 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + E +R + ++I+F RTK + D Sbjct 244 --------------------------------RAEAIMRLLDTQAPKKSIVFTRTKKEAD 271 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L Q+ + + LHGD +R+ ++ FKK D L+ TDVA+RG+D Sbjct 272 ELHQFLASK---------NYKSTALHGDMDQRDRRSSIMAFKKNDADVLVATDVASRGLD 322 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 I GV +V N LP ++Y+HRIGR GRA + G+AI+LV + K + Sbjct 323 ISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQKEIDSEIEL 382 Query 641 TRLKEDGGCTIWYNEMQL-LSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQ 692 + I +SE L ++++ ++ + + + Sbjct 383 FEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSK 435 Score = 109 bits (273), Expect = 6e-24, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 10/102 (10%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+++G+ + ++V E + P+ IQ ++IP +L G DV+ A+TG+GKT AF++P+I Sbjct 21 SFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN 80 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + K T + + M D Sbjct 81 NL----------KNNHTIEALVITPTRELAMQISDEIFKLGK 112 >sp|B7LU75|RHLB_ESCF3 ATP-dependent RNA helicase RhlB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73) OX=585054 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 2e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 8e-21, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|P20447|DBP3_YEAST ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP3 PE=1 SV=2 Length=523 Score = 301 bits (770), Expect = 2e-92, Method: Composition-based stats. Identities = 108/421 (26%), Positives = 182/421 (43%), Gaps = 72/421 (17%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 V +++ G + + + + L++ P+RELA Q +N+ D Sbjct 153 VGVAETGSGKTFAFGVPAISHLMNDQ-KKRGIQVLVISPTRELASQIYDNLIVL---TDK 208 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGL 375 ++ + GGV +Q L+ +VV TPGRL DL+ G ++LSQV +LVLDEAD + Sbjct 209 VGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRM 267 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L +G+ + I + + +D + Q ++ +AT +V++L+ M+ P V + D Sbjct 268 LEKGFEEDIKNIIRE-----TDASKRQTLMFTATWPK-EVRELASTFMNNPIKVSIGNTD 321 Query 436 --SVPDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + +V V+P K +L E L K H Sbjct 322 QLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPK------------------------ 357 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K ++ +IF K + +E+ G ++ +HGD Sbjct 358 -------------KNEKVLIFALYKKEAARVERNLKYNG---------YNVAAIHGDLSQ 395 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R Q L FK G L+ TDVAARG+DI V VIN+T P ++YVHRIGR GRA + Sbjct 396 QQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQ 455 Query 612 MGLAISLVATEKEKVWYHVCSSRG-----------KGCYNTRLKEDGGCTIWYNEMQLLS 660 G A +L +++ + + + K +T+ KE ++ ++ L Sbjct 456 TGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDLIKFGTHTKKKEHSAYGSFFKDVDLTK 515 Query 661 E 661 + Sbjct 516 K 516 Score = 91.7 bits (226), Expect = 5e-18, Method: Composition-based stats. Identities = 37/139 (27%), Positives = 56/139 (40%), Gaps = 19/139 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F + + I + + + PT IQA + P +L G DV+ AETGSGKT AF +P Sbjct 113 LLSFDYLSLDSSIQAEISK--FPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPA 170 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 I + K K+G + S + YD CC Sbjct 171 ISHLMNDQK-----KRGIQVL--VISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKD 223 Query 112 -QSREVKEWHGCRATKGLM 129 Q ++K+ AT G + Sbjct 224 EQRIQLKKSQVVVATPGRL 242 >sp|Q54QS3|DDX3_DICDI Probable ATP-dependent RNA helicase ddx3 OS=Dictyostelium discoideum OX=44689 GN=ddx3 PE=3 SV=1 Length=712 Score = 306 bits (784), Expect = 2e-92, Method: Composition-based stats. Identities = 96/371 (26%), Positives = 158/371 (43%), Gaps = 57/371 (15%) Query 263 DGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 G ++ P+AL++ P+RELA+Q + +F + ++ Sbjct 307 SGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFS---YGSPVSSVV 363 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 I GG Q++ L+ G DI+V T GRL DL+ G+++LS++++LVLDEAD +L G+ Sbjct 364 IYGGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEP 423 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I ++ ++ + Q ++ SAT ++ L+ ++ ++ + + + Sbjct 424 QIRQIISEFD--MPGCRDRQTLMFSATFPKQ-IQNLAADFLYNYIFLKVGVVGTTQNITQ 480 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + V K Y + + Sbjct 481 RIEYVVEED-----------------------------------------KNSYLLDYLS 499 Query 503 EHKMD-QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K D +IF TK CD L + Q+ F C+HGD ER+ L+ F Sbjct 500 GLKSDGLCLIFVETKRSCDTLTYFLNQR---------NFPTTCIHGDLTQPERENALQSF 550 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + FL+ TD+A+RG+ I V VIN LP + YVHRIGR GRA + GLAIS Sbjct 551 RSFATPFLVATDIASRGLHIGNVNLVINFDLPTDIHIYVHRIGRTGRAGKKGLAISFFNE 610 Query 622 EKEKVWYHVCS 632 + + V + Sbjct 611 KNKPVGAELLK 621 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 51/112 (46%), Gaps = 6/112 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F+++ + + ++ + PT +Q ++P+IL D++ A+TGSGKT AF P+ Sbjct 246 LNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPI 305 Query 61 IQIVY-----ETLKDQQEG-KKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + E + G + + + +D + F+ GS Sbjct 306 ISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGS 357 >sp|Q5RC67|DDX23_PONAB Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii OX=9601 GN=DDX23 PE=2 SV=1 Length=820 Score = 309 bits (791), Expect = 2e-92, Method: Composition-based stats. Identities = 92/413 (22%), Positives = 164/413 (40%), Gaps = 79/413 (19%) Query 251 PKDGFVALSKAPDGYIVKS------QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLN 304 + +++ G + ++ + + P A+I+ P+RELA+Q Sbjct 427 QNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEE 486 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 +F K + +R + +IGG++ DQ L G +IV+ TPGRL D++ L S+ Sbjct 487 ETIKFGKPLG---IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVPSRC 543 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG--------------------KRLQVI 404 ++VLDEAD ++ G+ + ++ +P K Q + Sbjct 544 TYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTV 603 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT+ V++L+ + P V + + V V ++ R Sbjct 604 MFTATMPPA-VERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKR---------- 652 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + + +++ IIF K CD L + Sbjct 653 ------------------------------KKLLAILEQGFDPPIIIFVNQKKGCDVLAK 682 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G ++ LHG + +R+ L K G L+ TDVA RGIDI V Sbjct 683 SLEKMG---------YNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDV 733 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 V+N + ++Y+HRIGR GRA + G+AI+ + E V+Y + + + Sbjct 734 SMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 786 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 0/104 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + + P I + +++ + PT IQ ++IP+ L D++ AETGSGKT AF IP+ Sbjct 390 IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPL 449 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + K + + + + + + F Sbjct 450 LVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGK 493 >sp|Q89AF9|DEAD_BUCBP ATP-dependent RNA helicase DeaD OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=deaD PE=3 SV=1 Length=602 Score = 303 bits (776), Expect = 2e-92, Method: Composition-based stats. Identities = 109/457 (24%), Positives = 179/457 (39%), Gaps = 72/457 (16%) Query 226 ALFPACVLKNAELKFN--FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL 283 F + L + + G + L K D + SG L Sbjct 6 MTFSSFGLNSCIITALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLL 65 Query 284 PN------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 N P+ L++ P+RELA Q F K + + L + GG QL L Sbjct 66 HNIKLDVRVPQILVLTPTRELAVQVAEAFSNFSKKL--IGVHVLALYGGQRYDLQLKSLR 123 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 G I+VGTPGRL D + L+LS + LVLDEAD +L G+ + + + +IP Sbjct 124 KGPQIIVGTPGRLLDHLKRRTLSLSNLHSLVLDEADEMLRMGFIEDVETIMTEIPD---- 179 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 R Q + SAT+ ++++S + M P + ++ + + V K Sbjct 180 --RHQTALFSATMPEA-IRRISRRFMKNPKEIRIQSNITTRPDIQQSYWMVYGK------ 230 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K + +R ++ IIF RTK Sbjct 231 -----------------------------------KTDALIRFLEAEDFSATIIFVRTKN 255 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + + + G ++ L+GD R+Q LE+ K G + LI TDVAAR Sbjct 256 ATLEVSEVLERYG---------YNSAALNGDMNQSLREQTLEKLKDGRLDILIATDVAAR 306 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 G+D+ + +VIN +P + ++YVHRIGR GRA R G A+ V + ++ ++ + Sbjct 307 GLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRKGKALLFVENRERRLLRNIERA---- 362 Query 638 CYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 N + E + + L + + + + + Sbjct 363 -MNISISEVNLPKSDFLSKRRLEKFAQKVQIQLDSKD 398 Score = 99.0 bits (245), Expect = 3e-20, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 52/107 (49%), Gaps = 9/107 (8%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS G+ I A+ ++ ++ P+ IQA IP ++ G DVL A+TGSGKT AF++P++ Sbjct 7 TFSSFGLNSCIITALNDIGYVQPSPIQAACIPYLIKGKDVLGMAQTGSGKTAAFALPLLH 66 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + ++ Q + + + + S F+ G+ Sbjct 67 NIKLDVRVPQ---------ILVLTPTRELAVQVAEAFSNFSKKLIGV 104 >sp|P47943|IF4A_SCHPO ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tif1 PE=1 SV=2 Length=392 Score = 296 bits (758), Expect = 2e-92, Method: Composition-based stats. Identities = 109/429 (25%), Positives = 184/429 (43%), Gaps = 75/429 (17%) Query 227 LFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ-------- 276 F LK L+ + +G E + + + + ++ SG + Sbjct 20 TFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPI--LGERDVLAQAQSGTGKTATFSISV 77 Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + + +ALI+ P+RELA+Q + ++ + IGG RD ++ L Sbjct 78 LQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMN---VECHACIGGTLVRDDMAAL 134 Query 337 ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 + GV +VVGTPGR+ D++ L V+ VLDEAD +LS+G+ D I + +P Sbjct 135 QAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTA- 193 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 QV++ SAT+ DV +++ K M P + +K ++ + + V V + +L Sbjct 194 -----QVVLLSATMP-QDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKL- 246 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 + + + QA+IFC T+ Sbjct 247 --------------------------------------DTLCDLYETVTVTQAVIFCNTR 268 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 D L + ++ F+ +HGD +R + F+ G R LI TD+ A Sbjct 269 RKVDWLTEQLTER---------DFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLA 319 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RGID+ V VIN LP ++NY+HRIGR GR R G++I+ V + ++ + + Sbjct 320 RGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREI-----E 374 Query 637 GCYNTRLKE 645 YNT ++E Sbjct 375 QFYNTHIEE 383 Score = 100 bits (248), Expect = 3e-21, Method: Composition-based stats. Identities = 33/133 (25%), Positives = 51/133 (38%), Gaps = 2/133 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F +M + PE+ + + + P+ IQ +I ILG DVL A++G+GKT FSI V Sbjct 18 IDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISV 77 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW- 119 +Q + +LK Q T + A L + Sbjct 78 LQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAG 137 Query 120 -HGCRATKGLMKG 131 H T G + Sbjct 138 VHVVVGTPGRVHD 150 >sp|Q9LU46|RH35_ARATH DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana OX=3702 GN=RH35 PE=2 SV=1 Length=591 Score = 303 bits (775), Expect = 2e-92, Method: Composition-based stats. Identities = 116/511 (23%), Positives = 198/511 (39%), Gaps = 77/511 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 KN KD+ + +K + + ++ L + ++ G Sbjct 146 KNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILA--------GRDMIGIAFTGSGKT 197 Query 267 VKSQHSGNAQVTQTKFLPN-----APKALIVEPSRELAEQTLNNIKQFKKYI---DNPKL 318 + Q + + P LIV PSRELA QT ++QF + P L Sbjct 198 LVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPL 257 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 R LL IGG+ R QL V++ GV IVV TPGRL D+++ K++L R+L LDEAD L+ Sbjct 258 RSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDL 317 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 G+ D I + + + Q ++ SAT+ + ++ + + P V++ + Sbjct 318 GFEDDIREVFDHF------KSQRQTLLFSATMPT-KIQIFARSALVKPVTVNVGRAGAAN 370 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 V V V + K Y + Sbjct 371 LDVIQEVEYVKQEA----------------------------------------KIVYLL 390 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 +++ +IFC K D D++ +Y + +G V +HG + +R+ + Sbjct 391 ECLQKTSP-PVLIFCENKADVDDIHEYLLLKG---------VEAVAIHGGKDQEDREYAI 440 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 FK G L+ TDVA++G+D + +VIN +P E +NYVHRIGR GR + G+A + Sbjct 441 SSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 500 Query 619 VATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT----ISQVE 674 + + + + E + ++ C + Sbjct 501 INKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETIANASGVKGCAYCGGLGHRI 560 Query 675 PDIKVPVDEFDGKVTYGQKRAAGGGSYKGHV 705 D + ++ +K G G Y+G + Sbjct 561 RDCPKLEHQKSVAISNSRKDYFGSGGYRGEI 591 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 1/102 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F +M + ++E + PT IQ + +P+IL G D++ A TGSGKT F +P+ Sbjct 145 IKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPM 204 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 I I + G+ I + Y+ F Sbjct 205 IMIALQEEM-MMPIAAGEGPIGLIVCPSRELARQTYEVVEQF 245 >sp|B7NTG2|RHLB_ECO7I ATP-dependent RNA helicase RhlB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) OX=585057 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 2e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B9XXL6|RHPA_HELP8 DEAD-box ATP-dependent RNA helicase RhpA OS=Helicobacter pylori (strain B128) OX=544406 GN=rhpA PE=1 SV=1 Length=492 Score = 300 bits (767), Expect = 3e-92, Method: Composition-based stats. Identities = 104/484 (21%), Positives = 194/484 (40%), Gaps = 67/484 (14%) Query 217 EIPPHMKNQALFPACVLKNAELKFNF--GEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN 274 EI ++ F LK + LK + G + A+ + D +G Sbjct 11 EIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGK 70 Query 275 AQVTQTKFLPN-----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + N +AL++ P+RELA Q + I + K+ + + + + GG + Sbjct 71 TAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKH---TRTKTVCVYGGQSV 127 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 + Q ++ +++ TPGRL D + +++ + +VLDE+D +L G+ D I + + Sbjct 128 KKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLDDIEEIFD 187 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 +P Q+++ SAT+ +K+L++KI+ P + + + + +N Sbjct 188 YLPSEA------QILLFSATMPEP-IKRLADKILENPIKIHIAPSNITNTDITQRFYVIN 240 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + E +R + ++ Sbjct 241 EHE----------------------------------------RAEAIMRLLDTQAPKKS 260 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 I+F RTK + D L Q+ + + LHGD +R+ ++ FKK D L Sbjct 261 IVFTRTKKEADELHQFLASK---------NYKSTALHGDMDQRDRRASIMAFKKNDADVL 311 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TDVA+RG+DI GV +V N LP ++Y+HRIGR GRA + G+AI+LV + K Sbjct 312 VATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLR 371 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQL-LSEIEEHLNCTISQVEPDIKVPVDEFDGKV 688 + + I +SE L ++++ ++ + + Sbjct 372 MQKEIDSEIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPSQLVLKLLSLQF 431 Query 689 TYGQ 692 + Sbjct 432 ETSK 435 Score = 109 bits (273), Expect = 6e-24, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 10/102 (10%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+++G+ + ++V E + P+ IQ ++IP +L G DV+ A+TG+GKT AF++P+I Sbjct 21 SFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN 80 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + K T + + M D Sbjct 81 NL----------KNNHTIEALVITPTRELAMQISDEIFKLGK 112 >sp|Q4P331|IF4A_USTMA ATP-dependent RNA helicase eIF4A OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=TIF1 PE=3 SV=1 Length=411 Score = 297 bits (760), Expect = 3e-92, Method: Composition-based stats. Identities = 113/426 (27%), Positives = 185/426 (43%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F LK L+ + +G E V + K D +G A + + Sbjct 40 FDNMELKEELLRGVYAYGFERPSAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAILQR 99 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 A +ALI+ P+RELA+Q + Y+ K+ IGG R+ ++ L G Sbjct 100 IDPSIKAVQALILAPTRELAQQIQKVVIALGDYM---KIDCHACIGGTNVREDMAKLNEG 156 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VVGTPGR+ D+++ Q++ LDEAD +LS+G+ D + + +PQ T Sbjct 157 AQVVVGTPGRVYDMINRRAFKTDQLKMFCLDEADEMLSRGFKDQMYEVFQLLPQDT---- 212 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q ++ SAT+ +V ++++K M P + +K ++ + + V V + +L Sbjct 213 --QCVLLSATMP-QEVLEVTKKFMRDPIRILVKRDELTLEGIKQFYVAVEKEDWKL---- 265 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 266 ------------------------------DTLCDLYETVTIT-----QAVIFCNTRRKV 290 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L +F+ +HGD + +R+ + F+ G R LI TD+ ARGI Sbjct 291 DWLTDKLT---------SREFTVSAMHGDMEQAQREVIMREFRSGSSRVLITTDLLARGI 341 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V ++ ++ + + Y Sbjct 342 DVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTSDDVRMLRDI-----EQFY 396 Query 640 NTRLKE 645 +T++ E Sbjct 397 STQIDE 402 Score = 93.3 bits (230), Expect = 7e-19, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 46/103 (45%), Gaps = 0/103 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F M + E+ + V + P+ IQA +I ++ G DV+ A++G+GKT FSI + Sbjct 37 IDNFDNMELKEELLRGVYAYGFERPSAIQARAIVPVIKGHDVIAQAQSGTGKTATFSIAI 96 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +Q + ++K Q T + Y + A Sbjct 97 LQRIDPSIKAVQALILAPTRELAQQIQKVVIALGDYMKIDCHA 139 >sp|Q3YVI4|RHLB_SHISS ATP-dependent RNA helicase RhlB OS=Shigella sonnei (strain Ss046) OX=300269 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|P0A8K0|RHLB_SHIFL ATP-dependent RNA helicase RhlB OS=Shigella flexneri OX=623 GN=rhlB PE=3 SV=2 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|Q1R4F9|RHLB_ECOUT ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain UTI89 / UPEC) OX=364106 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B6I4B6|RHLB_ECOSE ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain SE11) OX=409438 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|P0A8J8|RHLB_ECOLI ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain K12) OX=83333 GN=rhlB PE=1 SV=2 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B1IWC0|RHLB_ECOLC ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks) OX=481805 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|P0A8J9|RHLB_ECOL6 ATP-dependent RNA helicase RhlB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rhlB PE=3 SV=2 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|Q0TAU3|RHLB_ECOL5 ATP-dependent RNA helicase RhlB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) OX=362663 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|A1AHV0|RHLB_ECOK1 ATP-dependent RNA helicase RhlB OS=Escherichia coli O1:K1 / APEC OX=405955 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|A8A6N4|RHLB_ECOHS ATP-dependent RNA helicase RhlB OS=Escherichia coli O9:H4 (strain HS) OX=331112 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B1X9Z4|RHLB_ECODH ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain K12 / DH10B) OX=316385 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|C4ZZ48|RHLB_ECOBW ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B7M5C7|RHLB_ECO8A ATP-dependent RNA helicase RhlB OS=Escherichia coli O8 (strain IAI1) OX=585034 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B7MR01|RHLB_ECO81 ATP-dependent RNA helicase RhlB OS=Escherichia coli O81 (strain ED1a) OX=585397 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B7L8B6|RHLB_ECO55 ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain 55989 / EAEC) OX=585055 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B7MGJ1|RHLB_ECO45 ATP-dependent RNA helicase RhlB OS=Escherichia coli O45:K1 (strain S88 / ExPEC) OX=585035 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B7UMN5|RHLB_ECO27 ATP-dependent RNA helicase RhlB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) OX=574521 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|A7ZTY2|RHLB_ECO24 ATP-dependent RNA helicase RhlB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) OX=331111 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.4 bits (246), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B7NF85|RHLB_ECOLU ATP-dependent RNA helicase RhlB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (760), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 99.0 bits (245), Expect = 9e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B1LLV3|RHLB_ECOSM ATP-dependent RNA helicase RhlB OS=Escherichia coli (strain SMS-3-5 / SECEC) OX=439855 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (760), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQ---ATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLCAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EEFTMHDTIGCYLD---IDKGHVKFSKNG-KDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + C + +D+ + KD+ F +PP + + + L Sbjct 150 KQ---NHINLCAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|A3Q9R3|RHLB_SHELP ATP-dependent RNA helicase RhlB OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) OX=323850 GN=rhlB PE=3 SV=1 Length=435 Score = 297 bits (761), Expect = 3e-92, Method: Composition-based stats. Identities = 110/451 (24%), Positives = 180/451 (40%), Gaps = 73/451 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D L EI + ++ L ++ ++ G + Sbjct 11 FADFSLHPEIQQALVESGFEYCTPIQALSLPILLEHKD--------IAGQAQTGTGKTLA 62 Query 269 SQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 T +P N P+A+++ P+RELA Q + + K+ L+ ++ Sbjct 63 FLV-ATFNHLLTTPIPDGRQLNQPRAIVMAPTRELAIQIAKDGELLAKHTG---LKVGIV 118 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + Q VL+ GVDI++GT GR+ D V G +NLS ++ +VLDEAD + G+ Sbjct 119 YGGESYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINLSAIQAVVLDEADRMFDLGFIKD 178 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-H 442 I + ++P D ++ SATL S V++L+ M+ P V++ + + Sbjct 179 IRFLFRRMP----DANERLNMLFSATL-SMKVQELAYDHMNDPEKVEIAPSEKTSKNITE 233 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + P RL + I+ Sbjct 234 EIFYPSMEDKMRL-----------------------------------------LLTLIE 252 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 E ++AI+F TK C+NL + +G L GD +R + LE+F Sbjct 253 EDWPEKAIVFSNTKHSCENLWAHL---------EGDGHRVGLLTGDVPQKKRIRILEQFT 303 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 KG++ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G+++S E Sbjct 304 KGELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACEE 363 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + T + Sbjct 364 YALNLPAIEHYIQHSIPVTNYDSEALLDDIP 394 Score = 104 bits (258), Expect = 3e-22, Method: Composition-based stats. Identities = 64/354 (18%), Positives = 126/354 (36%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ + PEI QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFSLHPEIQQALVESGFEYCTPIQALSLPILLEHKDIAGQAQTGTGKTLAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T +G++ + + + + E+ H Sbjct 71 LLTTP--IPDGRQLNQPRAIVMAPTRELAIQI---------------AKDGELLAKHTGL 113 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G YEV D+G+ + +GT + + Sbjct 114 KV-GIVYGGESYEVQRKVLDKGV----------DILIGTT---------------GRIID 147 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPP---HMKNQALFPACVLKNAE 237 Y + ++ + + +D+ F KD+ F P N +K E Sbjct 148 YVRQGVINLSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDANERLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 L ++ + + SK I ++ T + P KA++ ++ Sbjct 208 LAYDHMNDP-EKVEIAPSEKTSKNITEEIFYPSMEDKMRLLLTLIEEDWPEKAIVFSNTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 -------HSCENLWAHLEGDGHRVGLLTGDVPQKKRIRILEQFTKGELDILVAT 313 >sp|B5YY28|RHLB_ECO5E ATP-dependent RNA helicase RhlB OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) OX=444450 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (760), Expect = 3e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHCLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 98.3 bits (243), Expect = 2e-20, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHC 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|Q31UK5|RHLB_SHIBS ATP-dependent RNA helicase RhlB OS=Shigella boydii serotype 4 (strain Sb227) OX=300268 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (760), Expect = 3e-92, Method: Composition-based stats. Identities = 110/407 (27%), Positives = 174/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q + + Sbjct 51 GQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-- 108 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 109 -EATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P + ++ SATL S+ V++L+ + M+ +++++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E + + P N + RL + L Sbjct 223 PEQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+AIIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + L+ F +GD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGA 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T ++L Sbjct 353 SGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 97.5 bits (241), Expect = 3e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ + +E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEVLEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|B2TU12|RHLB_SHIB3 ATP-dependent RNA helicase RhlB OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) OX=344609 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (760), Expect = 3e-92, Method: Composition-based stats. Identities = 110/407 (27%), Positives = 174/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q + + Sbjct 51 GQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA-- 108 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 109 -EATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P + ++ SATL S+ V++L+ + M+ +++++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E + + P N + RL + L Sbjct 223 PEQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+AIIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + L+ F +GD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGA 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T ++L Sbjct 353 SGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 97.5 bits (241), Expect = 3e-20, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ + +E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEVLEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|A4WG30|RHLB_ENT38 ATP-dependent RNA helicase RhlB OS=Enterobacter sp. (strain 638) OX=399742 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (760), Expect = 3e-92, Method: Composition-based stats. Identities = 115/453 (25%), Positives = 185/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++N+ ++ L ++ G + Sbjct 13 DFALHAKVIEALENKGFHYCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSAFHYLLSNPAMADRKVNQPRALIMAPTRELAVQIHADAEPLAQ---TTGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPTP----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+++ + G L GD +R + LE F +GD Sbjct 256 PDRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILEDFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D + +L Sbjct 367 NLTAIETYIGHSVPQSKYNPDALLSELPPPKRL 399 Score = 94.8 bits (234), Expect = 2e-19, Method: Composition-based stats. Identities = 57/355 (16%), Positives = 118/355 (33%), Gaps = 64/355 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + ++ +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHAKVIEALENKGFHYCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSAFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSNPA--MADRKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQTTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAFEIPPHMKNQ--ALFPACVLKNAE 237 ++ + LD + F K+ + L F P + LF A L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPTPQRLNMLFSAT-LSYRV 205 Query 238 LKFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPS 295 + F + ++ + + + ++ QT P +A+I + Sbjct 206 RELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANT 265 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + + ++ R L+ G VA + +L +LE+ +DI+V T Sbjct 266 K-------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTRGDLDILVAT 313 >sp|A6ZUA1|DBP3_YEAS7 ATP-dependent RNA helicase DBP3 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP3 PE=3 SV=1 Length=523 Score = 300 bits (768), Expect = 3e-92, Method: Composition-based stats. Identities = 108/421 (26%), Positives = 182/421 (43%), Gaps = 72/421 (17%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 V +++ G + + + + L++ P+RELA Q +N+ D Sbjct 153 VGVAETGSGKTFAFGVPAISHLMNDQ-KKRGIQVLVISPTRELASQIYDNLIVL---TDK 208 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGL 375 ++ + GGV +Q L+ +VV TPGRL DL+ G ++LSQV +LVLDEAD + Sbjct 209 VGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRM 267 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L +G+ + I + + +D + Q ++ +AT +V++L+ M+ P V + D Sbjct 268 LEKGFEEDIKNIIRE-----TDASKRQTLMFTATWPK-EVRELASTFMNNPIKVSIGNTD 321 Query 436 --SVPDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + +V V+P K +L E L K H Sbjct 322 QLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPK------------------------ 357 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K ++ +IF K + +E+ G ++ +HGD Sbjct 358 -------------KNEKVLIFALYKKEAARVERNLKYNG---------YNIAAIHGDLSQ 395 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R Q L FK G L+ TDVAARG+DI V VIN+T P ++YVHRIGR GRA + Sbjct 396 QQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQ 455 Query 612 MGLAISLVATEKEKVWYHVCSSRG-----------KGCYNTRLKEDGGCTIWYNEMQLLS 660 G A +L +++ + + + K +T+ KE ++ ++ L Sbjct 456 TGTAHTLFTEQEKHLAGGLVNVLNGANQPVPEDLIKFGTHTKKKEHSAYGSFFKDVDLTK 515 Query 661 E 661 + Sbjct 516 K 516 Score = 91.7 bits (226), Expect = 5e-18, Method: Composition-based stats. Identities = 37/139 (27%), Positives = 56/139 (40%), Gaps = 19/139 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F + + I + + + PT IQA + P +L G DV+ AETGSGKT AF +P Sbjct 113 LLSFDYLSLDSSIQAEISK--FPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPA 170 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 I + K K+G + S + YD CC Sbjct 171 ISHLMNDQK-----KRGIQVL--VISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKD 223 Query 112 -QSREVKEWHGCRATKGLM 129 Q ++K+ AT G + Sbjct 224 EQRIQLKKSQVVVATPGRL 242 >sp|Q5BFU7|DBP10_EMENI ATP-dependent RNA helicase dbp10 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp10 PE=3 SV=1 Length=936 Score = 311 bits (796), Expect = 4e-92, Method: Composition-based stats. Identities = 115/487 (24%), Positives = 190/487 (39%), Gaps = 33/487 (7%) Query 224 NQALFPACVLKNAELKFNFGEEEFKFPPKDG-FVALSKAPDGYIVKSQHSGNAQVTQTKF 282 N L A K + + +D V +++ G ++ ++ Sbjct 99 NANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKL-KSHS 157 Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 + LI+ PSRELA QTL +K+ K L+ +L++GG + +Q ++ DI Sbjct 158 TKFGARGLILSPSRELALQTLKVVKELGK---GTDLKSVLLVGGDSLEEQFGMMAGNPDI 214 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V+ TPGR L L+LS ++++V DEAD L G++ + + + +P Q Sbjct 215 VIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEILHGLPST------RQ 268 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP--KTDRLWERLG 460 ++ SATL V+ + + PT V L E + + + V K L L Sbjct 269 TLLFSATLPKSLVE-FARAGLQDPTLVRLDTESKISPDLQNAFFSVKSAEKEGALLYILN 327 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + + ++ K + E AV + I+F TK D Sbjct 328 EVIKMPTGPTEASLRLKEKGPEDSKNKKRKRAEMERAVNMKESPTKHSTIVFAATKHHVD 387 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + G F+ ++G RK ++ F+ G L+ TDVAARGID Sbjct 388 YLYSLLREAG---------FAVSYVYGSLDQTARKIQVQNFRTGISNILVVTDVAARGID 438 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 I + VIN P + + +VHR+GR RA R G + SLV + G+ Sbjct 439 IPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRKLVL 498 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF-------DGKVTYGQK 693 R + + ++ + S + L+ T V + D F G+ Y + Sbjct 499 GR---ESDQVNFAEDVAVGSLPRDGLSQTCEWVSRVLDDDADIFAQRAVSTKGEKLYLRT 555 Query 694 RAAGGGS 700 R A Sbjct 556 RNAASAE 562 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 65/364 (18%), Positives = 123/364 (34%), Gaps = 47/364 (13%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 93 FQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEK 152 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + G +G S + + G+D +S + Sbjct 153 LKSH--STKFGARG-----LILSPSRELALQTLKVVKELGKGTD---LKSVLLVGGDSLE 202 Query 124 ATKGLMKGKHYYEVSCHDQG-------LCRVGWSTMQA-SLDLGTDKFGFGFGGTGKKSH 175 G+M G ++ G + S+++ D F GF + Sbjct 203 EQFGMMAGNP--DIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFEMGFAAQLTEIL 260 Query 176 NKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKD------LGLAFEIPPHMKNQALFP 229 + T+ + K V+F++ G L +I P ++N Sbjct 261 HGLPS-------TRQTLLFSATLPKSLVEFARAGLQDPTLVRLDTESKISPDLQNAFFSV 313 Query 230 ACVLKNAELKFNFGE--EEFKFPPKDGFVALSKAPDGYIVKSQHSGN-AQVTQTKFLPNA 286 K L + E + P + K P+ K + + K P Sbjct 314 KSAEKEGALLYILNEVIKMPTGPTEASLRLKEKGPEDSKNKKRKRAEMERAVNMKESPTK 373 Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG---VAARDQLSVLENGV-DI 342 ++ ++ +++ + + G A + Q+ G+ +I Sbjct 374 HSTIVFAATK-------HHVDYLYSLLREAGFAVSYVYGSLDQTARKIQVQNFRTGISNI 426 Query 343 VVGT 346 +V T Sbjct 427 LVVT 430 >sp|B5FF87|RHLB_ALIFM ATP-dependent RNA helicase RhlB OS=Aliivibrio fischeri (strain MJ11) OX=388396 GN=rhlB PE=3 SV=1 Length=432 Score = 297 bits (760), Expect = 4e-92, Method: Composition-based stats. Identities = 119/491 (24%), Positives = 195/491 (40%), Gaps = 79/491 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDG 264 N DLGL ++ + + ++ L ++ + G +A A Sbjct 10 NFADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLTATFN 69 Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +++ + ++TQ P+A+I+ P+RELA Q N+ + I + L+ L Sbjct 70 HLLTTPAPEGRKITQ-------PRAIIMAPTRELAIQIFNDAESL---IASTGLKAALAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG Q V+E GVDI++GT GR+ D G ++ ++ +VLDEAD + G+ I Sbjct 120 GGERYEKQQQVIEQGVDILIGTTGRIIDFYKQGHIDFKMIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P T ++ SATL S+ V++L+ + M P V ++ E + Sbjct 180 RFIFRRMPAPT----ERLNMLFSATL-SYRVQELAFEHMQEPEHVVVEPEQKTGHRIKEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N L + L I+E Sbjct 235 LFYPSNDHKMALLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AIIF TK C+++ + + L GD +R++ LE F + Sbjct 254 EWPDRAIIFANTKHKCESVWGHL---------AADKHRVGLLTGDVPQKKRERILEEFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G+V L+ TDVAARG+ I V +V N LP+E ++YVHRIGR GRA G +IS E Sbjct 305 GNVDILVATDVAARGLHIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGASGNSISFACEEY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + E Y+ LL ++ L + Sbjct 365 AINLPAIEE----------YIEHSIPQSDYDASALLEDLPAPLRLQRRPQQNRRNNNGQR 414 Query 684 FDGKVTYGQKR 694 G + + R Sbjct 415 QGGNRKHSRPR 425 Score = 108 bits (270), Expect = 7e-24, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 119/351 (34%), Gaps = 56/351 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ P++ + ++ T IQA+++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+K + + + ++ + + G + Sbjct 71 LLTTPAP--EGRKITQPRAIIMAPTRELAIQIFN--------------DAESLIASTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A ++ + +QG+ + +GT G + + ++ Sbjct 115 AALAYGGERYEKQQQVIEQGV----------DILIGTT-------GRIIDFYKQGHIDF- 156 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAELK 239 + + +D+ F KD+ F P N + EL Sbjct 157 KMIQA-------VVLDEADRMFDLGFIKDIRFIFRRMPAPTERLNMLFSATLSYRVQELA 209 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELA 299 F +E + + + S A + +A+I ++ Sbjct 210 FEHMQEPEHVVVEPEQKTGHRIKEELFYPSNDHKMALLQTLIEEEWPDRAIIFANTK--- 266 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ K R L+ G V + + +LE VDI+V T Sbjct 267 ----HKCESVWGHLAADKHRVGLLTGDVPQKKRERILEEFTQGNVDILVAT 313 >sp|Q2UPY3|IF4A_ASPOR ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=tif1 PE=3 SV=1 Length=421 Score = 297 bits (759), Expect = 4e-92, Method: Composition-based stats. Identities = 111/426 (26%), Positives = 186/426 (44%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F A LK L+ + +G E + + K D +G + + + Sbjct 50 FDAMELKPELLRGVYAYGFERPSAIQQRAIKPIIKGSDVIAQAQSGTGKTATFSISALQK 109 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +ALI+ P+RELA+Q + +++ + IGG A R+ + L G Sbjct 110 LDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMN---ITCHACIGGTAVREDMKALGEG 166 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 ++VVGTPGR+ D++ L ++ +LDEAD +LS+G+++ I + +PQ T Sbjct 167 PEVVVGTPGRVHDMIQRRVLKTDHLKQFILDEADEMLSRGFTEQIYDIFQLLPQST---- 222 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 223 --QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKL---- 275 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 276 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 300 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD + +R ++ F+ G R LI TD+ ARGI Sbjct 301 DWLTDKLT---------ARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGI 351 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 352 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 406 Query 640 NTRLKE 645 +T+++E Sbjct 407 STQIEE 412 Score = 89.8 bits (221), Expect = 1e-17, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (41%), Gaps = 9/108 (8%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 49 SFDAMELKPELLRGVYAYGFERPSAIQQRAIKPIIKGSDVIAQAQSGTGKTATFSISALQ 108 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 + +K Q + + A + C Sbjct 109 KLDPNVKGCQ---------ALILAPTRELAQQIQKVVVAIGDFMNITC 147 >sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helicase prp11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp11 PE=1 SV=1 Length=1014 Score = 312 bits (800), Expect = 4e-92, Method: Composition-based stats. Identities = 109/501 (22%), Positives = 191/501 (38%), Gaps = 78/501 (16%) Query 231 CVLKNAELKF--NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--- 285 C L + + G E+ A++ D V SG + Sbjct 423 CGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKD 482 Query 286 --------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 P A+I+ P+RELA Q K F K ++ +R GG +DQ++ L+ Sbjct 483 QRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLN---IRACCAYGGAPIKDQIADLK 539 Query 338 NGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 G +IVV TPGR+ D++S NL + +LVLDEAD + G+ + R+ N I Sbjct 540 RGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNI--- 596 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV--PVNPKT 452 Q ++ SAT ++ L+ K++ P + + G V V +V P K Sbjct 597 ---RPDRQTVLFSATFPRA-MEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKF 652 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 RL E LG+ + DV + ++F Sbjct 653 SRLLELLGELYNNQLDV--------------------------------------RTLVF 674 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 + D L +++G ++ +HG + H+R + +K G LI T Sbjct 675 VDRQESADALLSDLMKRG---------YTSNSIHGGKDQHDRDSTISDYKAGVFDVLIAT 725 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 V ARG+D+ + V+N P+ ++YVHR+GR GRA G+A++ + E+EK + Sbjct 726 SVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAK 785 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSE---IEEHLNCTISQVEPDIKVPVDEFDGKVT 689 + + + + +++ E +S+++ Sbjct 786 ALKMSKQPVPKELQTLASQFLEKVKAGKEKAAGGGFGGKGLSRLDETRNAERKMQRKAYG 845 Query 690 YGQKRAAGGGSYKGHVDILAP 710 ++ K ++ + P Sbjct 846 EDEEDVETEAEAKSPLEKITP 866 Score = 115 bits (287), Expect = 6e-25, Method: Composition-based stats. Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++S+ G+ + + + + PT IQA++IP I G DV+ A+TGSGKT AF +P+ Sbjct 417 VTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPM 476 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + KDQ+ K G+ I + + + + Sbjct 477 FRHI----KDQRPLKTGEGPIAIIMTPTRELAVQIF 508 >sp|Q9LUW6|RH9_ARATH DEAD-box ATP-dependent RNA helicase 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH9 PE=1 SV=1 Length=610 Score = 303 bits (775), Expect = 4e-92, Method: Composition-based stats. Identities = 107/434 (25%), Positives = 185/434 (43%), Gaps = 70/434 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 DLG++ EI +K + + ++ A L+ + ++ G + Sbjct 120 DLGISPEIVKALKGRGIEKLFPIQKAVLE--------PAMEGRDMIGRARTGTGKTLAFG 171 Query 271 HSGNAQVTQTKFLPNA---PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 ++ + P+ L++ P+RELA Q ++ P L + + GG Sbjct 172 IPIIDKIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRE-----SAPSLDTICLYGGT 226 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 Q+ L G+D+ VGTPGR+ DL+ G LNLS+V+F+VLDEAD +L G+++ + + Sbjct 227 PIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEII 286 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 ++P + Q ++ SAT+ S+ ++ L++K ++ P +DL G+ Sbjct 287 LQKLPA------KRQSMMFSATMPSW-IRSLTKKYLNNPLTIDLVGDS------------ 327 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 +L + + I D P + K Sbjct 328 ----DQKLADGITMYSIAADSYGRASIIGPLVK---------------------EHGKGG 362 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 + I+F +TK D D L + C LHGD +R++ L F+ G+ Sbjct 363 KCIVFTQTKRDADRLAFGL----------AKSYKCEALHGDISQAQRERTLAGFRDGNFS 412 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+D+ V VI+ LP+ + +VHR GR GRA + G AI + ++ + Sbjct 413 ILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAV 472 Query 628 YHVCSSRGKGCYNT 641 + G Sbjct 473 KMIEKEVGSRFNEL 486 Score = 92.9 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 29/139 (21%), Positives = 52/139 (37%), Gaps = 10/139 (7%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 +++G+ PEI +A++ IQ + + G D++ A TG+GKT AF IP+I + Sbjct 119 ADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 178 Query 65 YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRA 124 +K + +GK + + A D +C Sbjct 179 ---IKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMREL 235 Query 125 TKGLMKGKHYYEVSCHDQG 143 G+ +V+ G Sbjct 236 NYGI-------DVAVGTPG 247 >sp|A6TGG9|RHLB_KLEP7 ATP-dependent RNA helicase RhlB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) OX=272620 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (759), Expect = 4e-92, Method: Composition-based stats. Identities = 111/413 (27%), Positives = 176/413 (43%), Gaps = 63/413 (15%) Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNI 306 ++ G + S + N P+ALI+ P+RELA Q + Sbjct 45 EGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRQVNQPRALIMAPTRELAVQIHADA 104 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 + + L+ L GG QL VLE+GVDI++GT GRL D +NL ++ Sbjct 105 EPLAQ---ATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQV 161 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 +VLDEAD + G+ I + ++P T + ++ SATL S+ V++L+ + M+ Sbjct 162 VVLDEADRMYDLGFIKDIRWLFRRMPPAT----QRLNMLFSATL-SYRVRELAFEQMNNA 216 Query 427 TWVDLKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 +V+++ E + + P N + RL + L Sbjct 217 EYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------- 250 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 ++E D+AI+F TK C+++ + G L Sbjct 251 ---------------LEEEWPDRAIVFANTKHRCEDIWGHLAADG---------HRVGLL 286 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 GD +R + LE F +GD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR Sbjct 287 TGDVAQKKRLRILEEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGR 346 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 GRA G +ISL E + + G ++ D T ++L Sbjct 347 TGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 97.9 bits (242), Expect = 2e-20, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 119/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + ++ + + + + + + + G + Sbjct 71 LLSHPAIAD--RQVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPATQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A++ ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLLEEEWPDRAIVFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ R L+ G VA + +L +LE +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILEEFTRGDLDILVAT 313 >sp|Q2U2J6|PRP5_ASPOR Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=prp5 PE=3 SV=1 Length=1186 Score = 315 bits (807), Expect = 4e-92, Method: Composition-based stats. Identities = 105/492 (21%), Positives = 196/492 (40%), Gaps = 98/492 (20%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 GL + + ++ + + ++K G + Sbjct 560 GLGVQTLDVIDRLGYSAPTSIQAQAIPAIMS--------GRDVIGVAKTGSGKTIAFLIP 611 Query 273 GNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + L N P LI+ P+RELA Q + K F K ++ LR + GG + Sbjct 612 MFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIK 668 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 DQ++ L+ G +I+V TPGR+ DL++ NL +V ++VLDEAD + G+ + ++ Sbjct 669 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 728 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + Q ++ SAT +++ L+ K ++ P + + G V + +V Sbjct 729 LANV------RPDKQTVLFSATFP-RNMEALARKTLNKPVEIVVGGRSVVAPEITQIVEV 781 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + + I++L+ + + E++ Sbjct 782 RSED----------------------------------KKFIRLLELLGNLYSTDENEDA 807 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +A+IF + D L + +++G + C+ +HG + +R +E FK G Sbjct 808 RALIFVERQEGADTLLRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFP 858 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 LI T VAARG+D+ + V+N P+ ++YVHR GR GRA G A++ + ++E+ Sbjct 859 VLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYS 918 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + L + V ++ VD F K Sbjct 919 VDIAKA--------------------------------LKQSGQSVPEPVQKMVDSFLEK 946 Query 688 VTYGQKRAAGGG 699 V G+++A+ G Sbjct 947 VKAGKEKASASG 958 Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats. Identities = 65/372 (17%), Positives = 131/372 (35%), Gaps = 49/372 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ +S+ G+ + ++ + + PT IQA++IP I+ G DV+ A+TGSGKT AF IP+ Sbjct 553 VSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPM 612 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 + + KDQ+ + + + + + + F + R V + Sbjct 613 FRHI----KDQRPLENMEGPVGLIMTPTRELATQIHKDCKPFLKALN-----LRAVCAYG 663 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 G + K E+ G + A + + + + F+ Sbjct 664 GAPIKDQIADLKRGAEIIVCTPGRM-IDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFE 722 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 + + + DK V FS + + L N ++ Sbjct 723 PQVMKILAN------VRPDKQTVLFSATF------PRNMEALARKTL-------NKPVEI 763 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 G P V + +I + GN + T +A +ALI +E A+ Sbjct 764 VVGGRSVVAPEITQIVEVRSEDKKFIRLLELLGN--LYSTDENEDA-RALIFVERQEGAD 820 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGG---VAARDQLSVLENGV-DIVVGTPGRLDDLVST 356 + + + I GG + + + G+ +++ T V+ Sbjct 821 -------TLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIAT------SVAA 867 Query 357 GKLNLSQVRFLV 368 L++ Q++ +V Sbjct 868 RGLDVKQLKLVV 879 >sp|P29562|IF4A1_RABIT Eukaryotic initiation factor 4A-I (Fragment) OS=Oryctolagus cuniculus OX=9986 GN=EIF4A1 PE=1 SV=2 Length=398 Score = 296 bits (757), Expect = 4e-92, Method: Composition-based stats. Identities = 114/428 (27%), Positives = 187/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F L + L+ + +G E+ P G+ +++A G K+ + + Sbjct 26 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSG-TGKTATFAISILQ 84 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + A +AL++ P+RELA+Q + Y+ IGG R ++ L+ Sbjct 85 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGAS---CHACIGGTNVRAEVQKLQM 141 Query 339 G-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 I+VGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 142 EAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL------ 195 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ S DV ++++K M P + +K E+ + + + V + +L Sbjct 196 NSNTQVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKL-- 252 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 253 --------------------------------DTLCDLYETLTIT-----QAVIFINTRR 275 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ +HGD ER + F+ G R LI TD+ AR Sbjct 276 KVDWLTEKM---------HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 326 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI++V E ++ + + Sbjct 327 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ET 381 Query 638 CYNTRLKE 645 YNT ++E Sbjct 382 FYNTSIEE 389 Score = 96.0 bits (237), Expect = 9e-20, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (40%), Gaps = 3/131 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I + Sbjct 23 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 82 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI---GSDGLCCQSREVK 117 +Q + LK Q T + Y S A + Q +++ Sbjct 83 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 142 Query 118 EWHGCRATKGL 128 H T G Sbjct 143 APHIIVGTPGR 153 >sp|A7TJ36|DBP3_VANPO ATP-dependent RNA helicase DBP3 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP3 PE=3 SV=1 Length=530 Score = 300 bits (768), Expect = 4e-92, Method: Composition-based stats. Identities = 111/427 (26%), Positives = 184/427 (43%), Gaps = 74/427 (17%) Query 256 VALSKAPDGYIVKS-QHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKY 312 + +++ G + N +T++ P N + LI+ P+RELA Q +N+ Sbjct 156 IGVAETGSGKTFAFGVPAINNILTKSGSKPGKNGIQVLIISPTRELASQIYDNLVIL--- 212 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 D L + GGV +Q + L+ +VV TPGRL DL+ G NLS V +LVLDEA Sbjct 213 TDKVGLECCCVYGGVPKDEQRTQLKRS-QVVVATPGRLLDLIQEGAANLSNVNYLVLDEA 271 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L +G+ + I + + + Q ++ +AT +V++L+ M+ P V + Sbjct 272 DRMLEKGFEEDIKNIIRE-----TKSTGRQTLMFTATWPK-EVRELASTFMNSPIKVSIG 325 Query 433 GED--SVPDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 D S + +V ++P K +L E L K + Sbjct 326 NTDELSANKRITQIVEVIDPFKKERKLLELLKKYQSGSK--------------------- 364 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K D+ +IF K + +E+ G + +HGD Sbjct 365 ----------------KDDKVLIFALYKKEAARVERNLNYNG---------YKVSAIHGD 399 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +R L+ FK G L+ TDVAARG+DI V VIN+T P ++YVHRIGR GR Sbjct 400 LSQQQRTNALDEFKTGRSSILLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGR 459 Query 609 AERMGLAISLVATEKEKVWYHVCSSRG-----------KGCYNTRLKEDGGCTIWYNEMQ 657 A + G A +L +++ + + + K +T+ KE +Y ++ Sbjct 460 AGKTGTAHTLFTEQEKHLAGSLVNVLNGAGQPVPEELKKFGTHTKKKEHSAYGAFYKDVD 519 Query 658 LLSEIEE 664 + + ++ Sbjct 520 MTKKAKK 526 Score = 96.0 bits (237), Expect = 2e-19, Method: Composition-based stats. Identities = 40/139 (29%), Positives = 57/139 (41%), Gaps = 15/139 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS + + I + + + PT IQA S P +L G DV+ AETGSGKT AF +P Sbjct 116 LLSFSHISLDSRIQAEISK--FPKPTPIQAVSWPYLLAGKDVIGVAETGSGKTFAFGVPA 173 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 I + T + GK G + S + YD CC Sbjct 174 INNIL-TKSGSKPGKNGIQVL--IISPTRELASQIYDNLVILTDKVGLECCCVYGGVPKD 230 Query 112 -QSREVKEWHGCRATKGLM 129 Q ++K AT G + Sbjct 231 EQRTQLKRSQVVVATPGRL 249 >sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=prp5 PE=3 SV=2 Length=1180 Score = 315 bits (806), Expect = 5e-92, Method: Composition-based stats. Identities = 106/492 (22%), Positives = 197/492 (40%), Gaps = 98/492 (20%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 GL + + ++ + + ++K G + Sbjct 553 GLGVQTLDVIDKLGYEKTTSIQAQAIPAIMS--------GRDVIGVAKTGSGKTIAFLIP 604 Query 273 GNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + L N P LI+ P+RELA Q + K F K ++ LR + GG + Sbjct 605 MFRHIKDQRPLDNMEGPVGLIMTPTRELATQIHKDCKPFLKALN---LRAVCAYGGAPIK 661 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 DQ++ L+ G +I+V TPGR+ DL++ NL +V ++VLDEAD + G+ + ++ Sbjct 662 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 721 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 I Q ++ SAT +++ L+ K + P + + G+ V + +V Sbjct 722 MANI------RPDRQTVLFSATFP-RNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEV 774 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 N + +++L+ + + E++ Sbjct 775 RNDD----------------------------------QKFVRLLELLGNLYSSDENEDA 800 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +A+IF + D L + +++G + C+ +HG + +R +E FK G Sbjct 801 RALIFVDRQEAADALLRELMRKG---------YPCMSIHGGKDQIDRDSTIEDFKAGIFP 851 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 LI T VAARG+D+ + V+N P+ ++YVHR GR GRA G A++ + ++E+ Sbjct 852 VLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYS 911 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + + L + +V ++ VD F K Sbjct 912 VDIAKA--------------------------------LKQSGQKVPEPVQKLVDAFLEK 939 Query 688 VTYGQKRAAGGG 699 V G+++A+ G Sbjct 940 VKAGKEKASASG 951 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 26/97 (27%), Positives = 50/97 (52%), Gaps = 4/97 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ + ++++ + T IQA++IP I+ G DV+ A+TGSGKT AF IP+ Sbjct 546 VQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPM 605 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD 97 + + KDQ+ + + + + + Sbjct 606 FRHI----KDQRPLDNMEGPVGLIMTPTRELATQIHK 638 >sp|B5XYY9|RHLB_KLEP3 ATP-dependent RNA helicase RhlB OS=Klebsiella pneumoniae (strain 342) OX=507522 GN=rhlB PE=3 SV=1 Length=421 Score = 297 bits (759), Expect = 5e-92, Method: Composition-based stats. Identities = 111/413 (27%), Positives = 176/413 (43%), Gaps = 63/413 (15%) Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNI 306 ++ G + S + N P+ALI+ P+RELA Q + Sbjct 45 EGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRQVNQPRALIMAPTRELAVQIHADA 104 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 + + L+ L GG QL VLE+GVDI++GT GRL D +NL ++ Sbjct 105 EPLAQ---ATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQV 161 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 +VLDEAD + G+ I + ++P T + ++ SATL S+ V++L+ + M+ Sbjct 162 VVLDEADRMYDLGFIKDIRWLFRRMPPAT----QRLNMLFSATL-SYRVRELAFEQMNNA 216 Query 427 TWVDLKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 +V+++ E + + P N + RL + L Sbjct 217 EYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------- 250 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 ++E D+AIIF TK C+++ + G L Sbjct 251 ---------------LEEEWPDRAIIFANTKHRCEDIWGHLAADG---------HRVGLL 286 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 GD +R + L+ F +GD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR Sbjct 287 TGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGR 346 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 GRA G +ISL E + + G ++ D T ++L Sbjct 347 TGRAGASGNSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 97.9 bits (242), Expect = 3e-20, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 118/354 (33%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + ++ + + + + + + + G + Sbjct 71 LLSHPAIAD--RQVNQPRALIMAPTRELAVQIH--------------ADAEPLAQATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPATQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLLEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|Q0CGJ9|SUB2_ASPTN ATP-dependent RNA helicase sub2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=sub2 PE=3 SV=1 Length=438 Score = 297 bits (760), Expect = 5e-92, Method: Composition-based stats. Identities = 99/382 (26%), Positives = 161/382 (42%), Gaps = 63/382 (16%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 L +A G + K+ + Q + +P L++ +RELA Q N +F KY+ Sbjct 94 DVLCQAKSG-LGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL-- 150 Query 316 PKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P ++ + GG + + VL N +IVVGTPGRL+ LV KL+L V+ VLDE Sbjct 151 PDVKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDEC 210 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L + R +I + T K QV++ SATL S +++ + +K M P V + Sbjct 211 DKMLD---QIDMRRDVQEIFRATPADK--QVMMFSATL-SQEIRPICKKFMRNPLEVYVD 264 Query 433 GEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + + ++ Sbjct 265 DDTKLTLHGLQQYYIKLSESE--------------------------------------- 285 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + +Q IIF ++ + L++ + F + +H Sbjct 286 -KNRKLNDLLDNLEFNQVIIFVKSTQRANELDKLLRE---------CNFPSIAVHSGVSQ 335 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 ER + + FK+ + R + TDV RGIDI + IN LP + +Y+HR+GR GR Sbjct 336 EERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGT 395 Query 612 MGLAISLVATE-KEKVWYHVCS 632 GL+IS V++E EKV + Sbjct 396 KGLSISFVSSEDDEKVLKDIEK 417 Score = 62.8 bits (151), Expect = 5e-09, Method: Composition-based stats. Identities = 15/63 (24%), Positives = 31/63 (49%), Gaps = 3/63 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++ IP + DVL A++G GKT F + + Sbjct 58 TGFRDFLLKGELLRAITDCGFEHPSEV---CIPTAILNVDVLCQAKSGLGKTAVFVLTTL 114 Query 62 QIV 64 + Sbjct 115 HQL 117 >sp|A8ACT3|RHLB_CITK8 ATP-dependent RNA helicase RhlB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) OX=290338 GN=rhlB PE=3 SV=1 Length=421 Score = 296 bits (758), Expect = 5e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 187/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++N+ ++ L ++ G + Sbjct 13 DFALHPKVIEALENKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSSFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQ---TTGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AI+F TK C+++ + G L GD +R + L+ F +GD Sbjct 256 PDRAIVFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ + T ++L Sbjct 367 NLPAIEAYIGHSIPVSKYNPEALMTNLPKPLRL 399 Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats. Identities = 54/354 (15%), Positives = 118/354 (33%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSSFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + + G + Sbjct 71 LLSHPAIDD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAQTTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A++ ++ Sbjct 207 ELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIVFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|Q9Y7T7|PRP28_SCHPO Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp28 PE=3 SV=1 Length=662 Score = 304 bits (778), Expect = 6e-92, Method: Composition-based stats. Identities = 101/457 (22%), Positives = 177/457 (39%), Gaps = 77/457 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 +N ++ GL E+ +K ++ A + + + +++ G Sbjct 249 RNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLL--------QRKDLIGIAETGSGKT 300 Query 267 VKSQHSGNAQVTQTKFLPN-----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 +++ L P A+++ P+RELA+Q +F + + R + Sbjct 301 AAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLG---FRCV 357 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 ++GG A +Q + G IVV TPGRL D + LSQ ++V+DEAD +L G+ Sbjct 358 SVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFE 417 Query 382 DFINRMHNQIPQVTSDGK-------------RLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 D +N++ + +P + K R Q I+ SATL V L++ + P Sbjct 418 DDVNKILSSLPSSNASEKDGSILATANSSSSRRQTIMFSATLPPR-VANLAKSYLIEPVM 476 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 + + D V V ++ + W Sbjct 477 LTIGNIGQAVDRVEQRV------------------------------EMISDDSKKWRRV 506 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 +IL+ IIF K + + + + G + V LHG Sbjct 507 EEILES--------NRFSPPIIIFVNLKRNIEAIAKQLNAIG---------WHAVTLHGS 549 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + +R++ +E+ + L+ TD+A RGIDI V V+N + ++Y HRIGR GR Sbjct 550 KSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGR 609 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 A + G AI+ + E V+Y + + E Sbjct 610 AGKSGTAITFLGPEDTDVYYDLRVLLSRSAKAHIPDE 646 Score = 97.1 bits (240), Expect = 1e-19, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 51/103 (50%), Gaps = 1/103 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + E G+ E+ + ++++++ P+ IQ +IP++L D++ AETGSGKT AF IP+ Sbjct 248 LRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPL 307 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 I + + L E + + G+ FA Sbjct 308 IIAISK-LPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFA 349 >sp|Q2UMH8|DBP3_ASPOR ATP-dependent RNA helicase dbp3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp3 PE=3 SV=1 Length=498 Score = 299 bits (765), Expect = 6e-92, Method: Composition-based stats. Identities = 114/430 (27%), Positives = 178/430 (41%), Gaps = 67/430 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 ++F P K+ P K+ + +++ G + Sbjct 81 ISFSHLPPCKDDLYAPLSSFKSPT--SIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPC 138 Query 274 NAQVT---QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ TK P P A+I+ P+RELA Q + Q K+ + +R + GGV Sbjct 139 LKKIQDSAMTKQKPYRPLAVIISPTRELAMQIYD---QLLKFSGSVGVRVACVFGGVRKE 195 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 +Q L+ +VV TPGRL DL + G ++L +V++LVLDEAD +L +G+ I + Sbjct 196 EQREALKT-AGVVVATPGRLKDLQNDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIIRP 254 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV----PDTVHHVVV 446 +P + Q I+ +AT V+ L+ M P V + G+ S + VV Sbjct 255 MPV-----SKRQTIMFTATWPP-SVRDLASTFMSSPVTVTIGGDPSADPRANTRIKQVVE 308 Query 447 PVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V P K RL + L +S Sbjct 309 VVKPHEKESRLVQLLNRSQRGVP------------------------------------- 331 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + ++ + FC K + +E+ +G F +HGD ER ++L+ FK G Sbjct 332 EPEKVLAFCLYKKEAMRIERLLRTKG---------FKVAGIHGDLSQQERFRSLDAFKTG 382 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARG+DI V VINVT P ++YVHRIGR GRA G A++L + Sbjct 383 AATVLVATDVAARGLDIPSVKQVINVTFPLTVEDYVHRIGRTGRAGAEGHAVTLFTETDK 442 Query 625 KVWYHVCSSR 634 + + Sbjct 443 AQSGALINVL 452 Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 62/142 (44%), Gaps = 16/142 (11%) Query 1 MAAFSEMG-VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +FS + ++ + + PT IQ+ + PL+ G DV+ AETGSGKT AF +P Sbjct 80 IISFSHLPPCKDDLYAPLSS--FKSPTSIQSATWPLLFAGRDVIGIAETGSGKTLAFGLP 137 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG-SDGLCC------- 111 ++ + ++ +Q+ + I S + M YD+ F+ + C Sbjct 138 CLKKIQDSAMTKQKPYRPLAVI---ISPTRELAMQIYDQLLKFSGSVGVRVACVFGGVRK 194 Query 112 --QSREVKEWHGCRATKGLMKG 131 Q +K AT G +K Sbjct 195 EEQREALKTAGVVVATPGRLKD 216 >sp|B8CHZ1|RHLB_SHEPW ATP-dependent RNA helicase RhlB OS=Shewanella piezotolerans (strain WP3 / JCM 13877) OX=225849 GN=rhlB PE=3 SV=1 Length=437 Score = 297 bits (760), Expect = 6e-92, Method: Composition-based stats. Identities = 104/457 (23%), Positives = 184/457 (40%), Gaps = 69/457 (15%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K D L E+ + ++ L +++ ++ G Sbjct 8 TKKFADFPLHKEVQQALNEVGFEFCTPIQALSLPILLAKKD--------IAGQAQTGTGK 59 Query 266 IVKSQHSG----NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 + + + T+ N P+A+I+ P+RELA Q + K+ L+ Sbjct 60 TLAFLVATFNHLLTEAAPTERKINQPRAIIMAPTRELAIQIAKDANLLAKHTG---LKVG 116 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 ++ GG Q VL+ G+DI++GT GR+ D V G +++S ++ +VLDEAD + G+ Sbjct 117 IVYGGEGYEAQRKVLDKGIDILIGTTGRIIDYVRQGVIDVSAIQAVVLDEADRMFDLGFI 176 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I + ++P D K ++ SATL S V++L+ M+ P V++ + + Sbjct 177 KDIRFLFRRMP----DAKSRLNMLFSATL-SMKVQELAYDHMNEPEKVEIAPNEKTSKNI 231 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + + + K + + Sbjct 232 KEEIFYPSMEE----------------------------------------KMPLLLSLL 251 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 +E ++AI+F TK C+ + + +G L GD +R + LE+F Sbjct 252 EEDWPEKAIVFSNTKHSCEKVWSWL---------EGDGHRVGLLTGDVPQKKRLRILEQF 302 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 GD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G+++S Sbjct 303 TSGDIDVLVATDVAARGLHIADVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGVSVSFACE 362 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 E + S T + ++ Sbjct 363 EYALNLPAIESYIQHSIPVTSYDSEALLDDIPAPKRI 399 Score = 101 bits (252), Expect = 2e-21, Method: Composition-based stats. Identities = 60/356 (17%), Positives = 119/356 (33%), Gaps = 62/356 (17%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F++ + E+ QA+ E+ + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 9 KKFADFPLHKEVQQALNEVGFEFCTPIQALSLPILLAKKDIAGQAQTGTGKTLAFLVATF 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + + +K + + + + + GL Sbjct 69 NHLLTEAAPTE--RKINQPRAIIMAPTRELAIQI-AKDANLLAKHTGLKV---------- 115 Query 122 CRATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQF 179 G++ G YE D+G+ + +GT + Sbjct 116 -----GIVYGGEGYEAQRKVLDKGI----------DILIGTT---------------GRI 145 Query 180 DNYGEEFTMHDTIGC-YLDIDKGHVKFSKNG-KDLGLAFEIPPHMK---NQALFPACVLK 234 +Y + + D + +D+ F KD+ F P K N +K Sbjct 146 IDYVRQ-GVIDVSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMK 204 Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEP 294 EL ++ E K + S + KA++ Sbjct 205 VQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSMEEKMPLLLSLLEEDWPEKAIVFSN 264 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ ++ ++ +++ R L+ G V + +L +LE +D++V T Sbjct 265 TK-------HSCEKVWSWLEGDGHRVGLLTGDVPQKKRLRILEQFTSGDIDVLVAT 313 >sp|Q7XMK8|RH6_ORYSJ DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0533000 PE=2 SV=1 Length=498 Score = 299 bits (765), Expect = 6e-92, Method: Composition-based stats. Identities = 98/382 (26%), Positives = 160/382 (42%), Gaps = 61/382 (16%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L++A +G K+ + + NA + +I+ P+RELA QT K+ K++ Sbjct 161 GSDILARAKNG-TGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHL 219 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 K++ ++ GG + +D + L V ++VGTPGR+ DL G L LV+DEAD Sbjct 220 ---KIQVMVTTGGTSLKDDIVRLYQPVHLLVGTPGRILDLTKKGVCVLKNCSMLVMDEAD 276 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LLS + I + +P Q+++ SAT VK+ +K + P ++L Sbjct 277 KLLSPEFQPSIQELIRYLP------SNRQILMFSATFP-VTVKEFKDKYLPKPYVINLMD 329 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E ++ + V + K Sbjct 330 ELTLK-GITQFYAFVEERQ----------------------------------------K 348 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + +++Q+IIFC + + L + + G +SC +H Sbjct 349 VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELG---------YSCFYIHAKMLQDH 399 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F+ G R L+CTD+ RGIDI V VIN P + Y+HR+GR GR +G Sbjct 400 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLG 459 Query 614 LAISLVATEKEKVWYHVCSSRG 635 LA++L+ E Y + G Sbjct 460 LAVNLITYEDRFNLYRIEQELG 481 Score = 96.4 bits (238), Expect = 1e-19, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 185 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + + Q + + Sbjct 186 IDQDKNAIQV---------VILVPTRELALQ 207 >sp|Q4R8K5|IF4A1_MACFA Eukaryotic initiation factor 4A-I OS=Macaca fascicularis OX=9541 GN=EIF4A1 PE=2 SV=1 Length=406 Score = 296 bits (757), Expect = 6e-92, Method: Composition-based stats. Identities = 114/428 (27%), Positives = 187/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F L + L+ + +G E+ P G+ +++A G K+ + + Sbjct 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSG-TGKTATFAISILQ 92 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + A +AL++ P+RELA+Q + Y+ IGG R ++ L+ Sbjct 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGAS---CHACIGGTNVRAEVQKLQM 149 Query 339 G-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 I+VGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 150 EAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL------ 203 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ S DV ++++K M P + +K E+ + + + V + +L Sbjct 204 NSNTQVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKL-- 260 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 261 --------------------------------DTLCDLYETLTIT-----QAVIFINTRR 283 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ +HGD ER + F+ G R LI TD+ AR Sbjct 284 KVDWLTEKM---------HARDFTASAMHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 334 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI++V E ++ + + Sbjct 335 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ET 389 Query 638 CYNTRLKE 645 YNT ++E Sbjct 390 FYNTSIEE 397 Score = 96.0 bits (237), Expect = 1e-19, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (40%), Gaps = 3/131 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I + Sbjct 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI---GSDGLCCQSREVK 117 +Q + LK Q T + Y S A + Q +++ Sbjct 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150 Query 118 EWHGCRATKGL 128 H T G Sbjct 151 APHIIVGTPGR 161 >sp|A4R715|DHH1_PYRO7 ATP-dependent RNA helicase DHH1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DHH1 PE=3 SV=2 Length=535 Score = 300 bits (768), Expect = 6e-92, Method: Composition-based stats. Identities = 106/446 (24%), Positives = 179/446 (40%), Gaps = 71/446 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++ GL ++ + ++ + + K+G + ++V Sbjct 49 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNG----TGKTAAFVVP 104 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + N +V++ + LI+ P+RELA QT K K++ + ++ GG Sbjct 105 ALETINPKVSKI-------QCLILVPTRELAMQTSQVCKTLGKHLG---INVMVTTGGTT 154 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L++ V IVVGTPGR+ DL +LS+ ++DEAD LLS ++ I ++ Sbjct 155 LRDDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLL 214 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 P K QV++ SAT VK+ S+K M P ++L ++ + V Sbjct 215 QFHP------KDRQVMLFSATFP-ISVKEFSDKNMTNPYEINLM-DELTLRGITQYYAFV 266 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K K + +++Q Sbjct 267 EEKQ----------------------------------------KVHCLNTLFSKLQINQ 286 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 +IIFC + + L + + G +SC H + R + F+ G R Sbjct 287 SIIFCNSTNRVELLAKKITELG---------YSCFYSHAKMQQQARNRVFHDFRNGVCRN 337 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L++ E Y Sbjct 338 LVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLISWEDRFNLY 397 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYN 654 ++ G D ++ N Sbjct 398 NIERDLGTEIQPIPSTIDKSLYVYDN 423 Score = 100 bits (249), Expect = 7e-21, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F G+ ++ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF +P ++ Sbjct 49 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALET 108 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + + Q + M Sbjct 109 INPKVSKIQ---------CLILVPTRELAMQ 130 >sp|A8G0U0|RHLB_SHESH ATP-dependent RNA helicase RhlB OS=Shewanella sediminis (strain HAW-EB3) OX=425104 GN=rhlB PE=3 SV=1 Length=435 Score = 297 bits (759), Expect = 6e-92, Method: Composition-based stats. Identities = 105/418 (25%), Positives = 172/418 (41%), Gaps = 65/418 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQ 301 K ++ G + T +P N P+A+I+ P+RELA Q Sbjct 41 PILLQKKDIAGQAQTGTGKTLAFLV-ATFNHLLTTPIPEGRQLNQPRAIIMAPTRELAIQ 99 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL 361 + K+ L+ ++ GG + Q VL+ GVDI++GT GR+ D V G +N+ Sbjct 100 IAKDADLLAKHTG---LKVGIVYGGESYEVQRKVLDKGVDILIGTTGRIIDYVRQGIINV 156 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 S ++ +VLDEAD + G+ I + ++P D K ++ SATL S V++L+ Sbjct 157 SAIQAVVLDEADRMFDLGFIKDIRFLFRRMP----DAKSRLNMLFSATL-SMKVQELAYD 211 Query 422 IMHFPTWVDLKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 M+ P V++ + + + P + RL Sbjct 212 HMNEPEKVEIAPNEKTSKNIKEEIFYPSMDEKMRL------------------------- 246 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 + ++E D+AI+F TK C+ L + +G Sbjct 247 ----------------LLTLLEEDWPDKAIVFSNTKHSCEKLWSWL---------EGDGH 281 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 L GD +R + LE F +G + L+ TDVAARG+ I V +V N LPD+ ++YV Sbjct 282 RVGLLTGDVPQKKRIRILELFTEGKLDVLVATDVAARGLHISDVSHVYNYDLPDDCEDYV 341 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 HRIGR GRA + G+++S E + T + +++ Sbjct 342 HRIGRTGRAGKKGVSVSFACEEYALNLPAIEEYINHTIPVTNYDSEALLDDIPAPVRV 399 Score = 101 bits (252), Expect = 1e-21, Method: Composition-based stats. Identities = 61/353 (17%), Positives = 121/353 (34%), Gaps = 60/353 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ + EI A+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFSLQTEIKTALNESGFEYCTPIQALSLPILLQKKDIAGQAQTGTGKTLAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG++ + + + + + GL Sbjct 71 LLTTP--IPEGRQLNQPRAIIMAPTRELAIQI-AKDADLLAKHTGLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G YEV D+G+ + +GT + + Sbjct 116 ---GIVYGGESYEVQRKVLDKGV----------DILIGTT---------------GRIID 147 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMK---NQALFPACVLKNAE 237 Y + ++ + + +D+ F KD+ F P K N +K E Sbjct 148 YVRQGIINVSAIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQE 207 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++ E K + S + KA++ ++ Sbjct 208 LAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSMDEKMRLLLTLLEEDWPDKAIVFSNTK- 266 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 ++ ++ +++ R L+ G V + ++ +L E +D++V T Sbjct 267 ------HSCEKLWSWLEGDGHRVGLLTGDVPQKKRIRILELFTEGKLDVLVAT 313 >sp|A2QFL3|DBP3_ASPNC ATP-dependent RNA helicase dbp3 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp3 PE=3 SV=1 Length=495 Score = 298 bits (764), Expect = 6e-92, Method: Composition-based stats. Identities = 120/430 (28%), Positives = 181/430 (42%), Gaps = 74/430 (17%) Query 225 QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS--QHSGNAQVTQTKF 282 ++ +++A F F + +++ G + N Q + K Sbjct 96 ESFTSPTAIQSATWPFLFS--------GRDVIGIAETGSGKTLGFGLPCLKNLQDSAKKG 147 Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 P P A+++ P+RELA Q + Q K+ + ++ I GGV +Q L+ I Sbjct 148 KPYKPTAVMISPTRELAMQIHD---QISKFAELVDIKVACIFGGVKKEEQREALKTAA-I 203 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 VV TPGRL DL + G ++L +V++LVLDEAD +L +G+ I + +P + Q Sbjct 204 VVATPGRLKDLQNDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIIRPMPV-----SKRQ 258 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV----PDTVHHVVVPVNP--KTDRLW 456 ++ +AT V+ L+ M P V + GE S + VV V P K RL Sbjct 259 TVMFTATWPPV-VRDLAATFMTSPVTVTIGGEPSADPRANTRIKQVVEVVKPHEKEQRLV 317 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 + L K D+ ++FC K Sbjct 318 QLLNKYQKGPS-------------------------------------SSDKILVFCLYK 340 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + +E+ +G F +HGD ER ++LE FKKG L+ TDVAA Sbjct 341 KEAVRVERLLWNKG---------FKVAGIHGDLGQQERFKSLESFKKGVSTVLVATDVAA 391 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RG+DI V VINVT P ++YVHRIGR GRA G AI+L + + + Sbjct 392 RGLDIPSVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLFTEVDKAQSGALINVL-- 449 Query 637 GCYNTRLKED 646 N + ED Sbjct 450 KAANQDVPED 459 Score = 97.9 bits (242), Expect = 4e-20, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 17/142 (12%) Query 1 MAAFSEMG-VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +FS + + + +E + PT IQ+ + P + G DV+ AETGSGKT F +P Sbjct 78 ITSFSHLPTCNSALYRPLES--FTSPTAIQSATWPFLFSGRDVIGIAETGSGKTLGFGLP 135 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC------- 111 ++ + ++ K K S + M +D+ S FA D + C Sbjct 136 CLKNLQDSAKK----GKPYKPTAVMISPTRELAMQIHDQISKFAELVDIKVACIFGGVKK 191 Query 112 --QSREVKEWHGCRATKGLMKG 131 Q +K AT G +K Sbjct 192 EEQREALKTAAIVVATPGRLKD 213 >sp|A8GZJ0|RHLB_SHEPA ATP-dependent RNA helicase RhlB OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) OX=398579 GN=rhlB PE=3 SV=1 Length=436 Score = 297 bits (759), Expect = 6e-92, Method: Composition-based stats. Identities = 106/430 (25%), Positives = 177/430 (41%), Gaps = 61/430 (14%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQT 302 K ++ G + + + T N P+A+I+ P+RELA Q Sbjct 41 PILLEKKDIAGQAQTGTGKTLAFLVATFNHLLSTPIPAERQLNQPRAIIMAPTRELAIQI 100 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS 362 + K+ L+ ++ GG Q VL+ GVDI++GT GR+ D V G +N+S Sbjct 101 AKDANLLAKHTG---LKVGIVYGGEGYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINVS 157 Query 363 QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKI 422 ++ +VLDEAD + G+ I + ++P D K ++ SATL S V++L+ Sbjct 158 CIQAVVLDEADRMFDLGFIKDIRFLFRRMP----DAKSRLNMLFSATL-SMKVQELAYDH 212 Query 423 MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 M+ P V++ + + + + + Sbjct 213 MNEPEKVEIAPNEKTSKNIKEEIFYPSMEE------------------------------ 242 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 K + ++E ++AI+F TK C+ + + +G Sbjct 243 ----------KMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWL---------EGDGHRA 283 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 L GD +R + LE+F KGD+ L+ TDVAARG+ I V +V N LPD+ ++YVHR Sbjct 284 GLLTGDVPQKKRLRILEQFTKGDIDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHR 343 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 IGR GRA + G+++S E + S T D +++ + Sbjct 344 IGRTGRAGQKGVSVSFACEEYALNLPAIESYIQHSIPVTSYDSDALLDDIPPPVRIHRKP 403 Query 663 EEHLNCTISQ 672 H T + Sbjct 404 STHTRNTRDR 413 Score = 105 bits (263), Expect = 6e-23, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 121/355 (34%), Gaps = 64/355 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ + E+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKTLAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T ++ + + + + + GL Sbjct 71 LLSTP--IPAERQLNQPRAIIMAPTRELAIQI-AKDANLLAKHTGLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G YEV D+G+ + +GT + + Sbjct 116 ---GIVYGGEGYEVQRKVLDKGV----------DILIGTT---------------GRIID 147 Query 182 YGEEFTMHDTIGCY--LDIDKGHVKFSKNG-KDLGLAFEIPPHMK---NQALFPACVLKN 235 Y + ++ + C + +D+ F KD+ F P K N +K Sbjct 148 YVRQGVIN--VSCIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKV 205 Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPS 295 EL ++ E K + S + KA++ + Sbjct 206 QELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSMEEKMPLLLSLLEEDWPEKAIVFSNT 265 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ +++ R L+ G V + +L +LE +DI+V T Sbjct 266 K-------HSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILEQFTKGDIDILVAT 313 >sp|B0TJ29|RHLB_SHEHH ATP-dependent RNA helicase RhlB OS=Shewanella halifaxensis (strain HAW-EB4) OX=458817 GN=rhlB PE=3 SV=1 Length=436 Score = 297 bits (759), Expect = 7e-92, Method: Composition-based stats. Identities = 112/466 (24%), Positives = 183/466 (39%), Gaps = 81/466 (17%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQT 302 K ++ G + + + T N P+A+I+ P+RELA Q Sbjct 41 PILLEKKDIAGQAQTGTGKTLAFLVATFNHLLSTPIPAERQLNQPRAIIMAPTRELAIQI 100 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS 362 + K+ L+ ++ GG Q VL+ GVDI++GT GR+ D V G +N+S Sbjct 101 AKDANLLAKHTG---LKVGIVYGGEGYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINVS 157 Query 363 QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKI 422 ++ +VLDEAD + G+ I + ++P D K ++ SATL S V++L+ Sbjct 158 CIQAVVLDEADRMFDLGFIKDIRFLFRRMP----DAKSRLNMLFSATL-SMKVQELAYDH 212 Query 423 MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 M+ P V++ + + + + + Sbjct 213 MNEPEKVEIAPNEKTSKNIKEEIFYPSMEE------------------------------ 242 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 K + ++E ++AI+F TK C+ + + +G Sbjct 243 ----------KMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWL---------EGDGHRA 283 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 L GD +R + LE+F KG++ L+ TDVAARG+ I V +V N LPD+ ++YVHR Sbjct 284 GLLTGDVPQKKRLRILEQFTKGEIDILVATDVAARGLHIADVSHVYNYDLPDDCEDYVHR 343 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 IGR GRA + G+++S E + S T D LL +I Sbjct 344 IGRTGRAGQKGISVSFACEEYALNLPAIESYIQHSIPVTSYDSDA----------LLDDI 393 Query 663 EEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGG--SYKGHVD 706 + + P G R GG + H Sbjct 394 PPPVRIH--------RKPSTHTRNTRDRGASRPQGGQRSGPRRHDR 431 Score = 106 bits (265), Expect = 3e-23, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 121/355 (34%), Gaps = 64/355 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++ + E+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKTLAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T ++ + + + + + GL Sbjct 71 LLSTP--IPAERQLNQPRAIIMAPTRELAIQI-AKDANLLAKHTGLKV------------ 115 Query 124 ATKGLMKGKHYYEV--SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 G++ G YEV D+G+ + +GT + + Sbjct 116 ---GIVYGGEGYEVQRKVLDKGV----------DILIGTT---------------GRIID 147 Query 182 YGEEFTMHDTIGCY--LDIDKGHVKFSKNG-KDLGLAFEIPPHMK---NQALFPACVLKN 235 Y + ++ + C + +D+ F KD+ F P K N +K Sbjct 148 YVRQGVIN--VSCIQAVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKV 205 Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPS 295 EL ++ E K + S + KA++ + Sbjct 206 QELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSMEEKMPLLLSLLEEDWPEKAIVFSNT 265 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ +++ R L+ G V + +L +LE +DI+V T Sbjct 266 K-------HSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILEQFTKGEIDILVAT 313 >sp|A7MQI2|RHLB_CROS8 ATP-dependent RNA helicase RhlB OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=rhlB PE=3 SV=1 Length=421 Score = 296 bits (758), Expect = 7e-92, Method: Composition-based stats. Identities = 117/452 (26%), Positives = 192/452 (42%), Gaps = 69/452 (15%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDGYIV 267 D L + ++ + + ++ L + + G +A + Y++ Sbjct 13 DFALHPVVVQALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLL 72 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + N QV Q P+ALI+ P+RELA Q ++ + + ++ L GG Sbjct 73 SHPAAENRQVNQ-------PRALIMAPTRELAVQIHSDAEPLA---EATGIKLGLAYGGD 122 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I + Sbjct 123 GYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMYDLGFIKDIRWL 182 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVVV 446 ++P T ++ SATL S+ V++L+ + M+ +V+++ E + + Sbjct 183 FRRMPAAT----ERLNMLFSATL-SYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFY 237 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 P N + RL + L I+E Sbjct 238 PSNEEKMRLLQTL-----------------------------------------IEEEWP 256 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 D+AIIF TK C+++ + G L GD +R + L+ F +GD+ Sbjct 257 DRAIIFANTKHRCEDIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGDL 307 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 308 DILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALN 367 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D + +L Sbjct 368 LPAIETYIGHSIPVSKYNPDALLSELPPPKRL 399 Score = 99.0 bits (245), Expect = 9e-21, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 117/352 (33%), Gaps = 58/352 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + QA+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPVVVQALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + E ++ + + + + + + E G + Sbjct 71 LLSHPAA--ENRQVNQPRALIMAPTRELAVQIH--------------SDAEPLAEATGIK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT G + N G Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT-------GRLIDYTKQNHVNLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPAATERLNMLFSAT-LSYRVREL 208 Query 241 NFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSREL 298 F + ++ + + + ++ QT P +A+I ++ Sbjct 209 AFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + + ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -----HRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|P60843|IF4A1_MOUSE Eukaryotic initiation factor 4A-I OS=Mus musculus OX=10090 GN=Eif4a1 PE=1 SV=1 Length=406 Score = 295 bits (756), Expect = 7e-92, Method: Composition-based stats. Identities = 114/428 (27%), Positives = 187/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F L + L+ + +G E+ P G+ +++A G K+ + + Sbjct 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSG-TGKTATFAISILQ 92 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + A +AL++ P+RELA+Q + Y+ IGG R ++ L+ Sbjct 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGAS---CHACIGGTNVRAEVQKLQM 149 Query 339 G-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 I+VGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 150 EAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL------ 203 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ S DV ++++K M P + +K E+ + + + V + +L Sbjct 204 NSNTQVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKL-- 260 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 261 --------------------------------DTLCDLYETLTIT-----QAVIFINTRR 283 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ +HGD ER + F+ G R LI TD+ AR Sbjct 284 KVDWLTEKM---------HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 334 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI++V E ++ + + Sbjct 335 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ET 389 Query 638 CYNTRLKE 645 YNT ++E Sbjct 390 FYNTSIEE 397 Score = 96.0 bits (237), Expect = 1e-19, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (40%), Gaps = 3/131 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I + Sbjct 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI---GSDGLCCQSREVK 117 +Q + LK Q T + Y S A + Q +++ Sbjct 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150 Query 118 EWHGCRATKGL 128 H T G Sbjct 151 APHIIVGTPGR 161 >sp|P60842|IF4A1_HUMAN Eukaryotic initiation factor 4A-I OS=Homo sapiens OX=9606 GN=EIF4A1 PE=1 SV=1 Length=406 Score = 295 bits (756), Expect = 7e-92, Method: Composition-based stats. Identities = 114/428 (27%), Positives = 187/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F L + L+ + +G E+ P G+ +++A G K+ + + Sbjct 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSG-TGKTATFAISILQ 92 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + A +AL++ P+RELA+Q + Y+ IGG R ++ L+ Sbjct 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGAS---CHACIGGTNVRAEVQKLQM 149 Query 339 G-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 I+VGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 150 EAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL------ 203 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ S DV ++++K M P + +K E+ + + + V + +L Sbjct 204 NSNTQVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKL-- 260 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 261 --------------------------------DTLCDLYETLTIT-----QAVIFINTRR 283 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ +HGD ER + F+ G R LI TD+ AR Sbjct 284 KVDWLTEKM---------HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 334 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI++V E ++ + + Sbjct 335 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ET 389 Query 638 CYNTRLKE 645 YNT ++E Sbjct 390 FYNTSIEE 397 Score = 96.0 bits (237), Expect = 1e-19, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (40%), Gaps = 3/131 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I + Sbjct 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI---GSDGLCCQSREVK 117 +Q + LK Q T + Y S A + Q +++ Sbjct 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150 Query 118 EWHGCRATKGL 128 H T G Sbjct 151 APHIIVGTPGR 161 >sp|Q3SZ54|IF4A1_BOVIN Eukaryotic initiation factor 4A-I OS=Bos taurus OX=9913 GN=EIF4A1 PE=2 SV=1 Length=406 Score = 295 bits (756), Expect = 7e-92, Method: Composition-based stats. Identities = 114/428 (27%), Positives = 187/428 (44%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F L + L+ + +G E+ P G+ +++A G K+ + + Sbjct 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSG-TGKTATFAISILQ 92 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + A +AL++ P+RELA+Q + Y+ IGG R ++ L+ Sbjct 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGAS---CHACIGGTNVRAEVQKLQM 149 Query 339 G-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 I+VGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 150 EAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL------ 203 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ S DV ++++K M P + +K E+ + + + V + +L Sbjct 204 NSNTQVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKL-- 260 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 261 --------------------------------DTLCDLYETLTIT-----QAVIFINTRR 283 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ +HGD ER + F+ G R LI TD+ AR Sbjct 284 KVDWLTEKM---------HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 334 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+AI++V E ++ + + Sbjct 335 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ET 389 Query 638 CYNTRLKE 645 YNT ++E Sbjct 390 FYNTSIEE 397 Score = 96.0 bits (237), Expect = 1e-19, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (40%), Gaps = 3/131 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I + Sbjct 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI---GSDGLCCQSREVK 117 +Q + LK Q T + Y S A + Q +++ Sbjct 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150 Query 118 EWHGCRATKGL 128 H T G Sbjct 151 APHIIVGTPGR 161 >sp|Q2NQB2|RHLB_SODGM ATP-dependent RNA helicase RhlB OS=Sodalis glossinidius (strain morsitans) OX=343509 GN=rhlB PE=3 SV=1 Length=415 Score = 296 bits (757), Expect = 7e-92, Method: Composition-based stats. Identities = 109/378 (29%), Positives = 165/378 (44%), Gaps = 59/378 (16%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P+ALI+ P+RELA Q ++ + + L+ L GG QL VLE GVDI+V Sbjct 83 NQPRALIMAPTRELAVQIHSDAEPLAQ---ATGLKMGLAYGGDGYDKQLKVLEAGVDILV 139 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GT GRL D +N+S ++ +VLDEAD + G+ I + ++P + Sbjct 140 GTTGRLIDYTKQNYVNMSAIQVVVLDEADRMFDLGFIKDIRWLFRRMPAAAG----RLNM 195 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSH 463 + SATL S+ V++L+ + M+ +V+++ + + P N + RL + L Sbjct 196 LFSATL-SYRVRELAFEHMNNAEYVEVEPLQKTGHRIQEELFYPSNEEKMRLLQTL---- 250 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 I+E D+ IIF TK C+++ Sbjct 251 -------------------------------------IEEEWPDRCIIFANTKHRCEDIW 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + G L GD R + LE+F +G + L+ TDVAARG+ I Sbjct 274 GHLAADG---------HRVGLLTGDVSQKRRLRILEKFTQGALDILVATDVAARGLHIPS 324 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRL 643 V +V N LPD+ ++YVHRIGR GRA G +ISL E + S G ++ Sbjct 325 VTHVFNYDLPDDCEDYVHRIGRTGRAGESGCSISLACEEYALNLTAIESYIGHQIPVSKY 384 Query 644 KEDGGCTIWYNEMQLLSE 661 D T +L Sbjct 385 NSDALLTDLPAPKRLTRR 402 Score = 102 bits (254), Expect = 7e-22, Method: Composition-based stats. Identities = 55/354 (16%), Positives = 114/354 (32%), Gaps = 58/354 (16%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS+ + P I + ++ + T IQA ++P L G DV A+TG+GKT AF Sbjct 9 KKFSDFALYPPIVEVLDSKGFNNCTPIQALTLPTTLAGKDVAGQAQTGTGKTLAFLTATF 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + EG++ + + + + + + + G Sbjct 69 HHLLTHPAA--EGRQTNQPRALIMAPTRELAVQIH--------------SDAEPLAQATG 112 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 + + ++ + G+ + +GT + + N Sbjct 113 LKMGLAYGGDGYDKQLKVLEAGV----------DILVGTT----------GRLIDYTKQN 152 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAEL 238 Y + + +D+ F KD+ F P + LF A L Sbjct 153 YVNMSAIQVVV-----LDEADRMFDLGFIKDIRWLFRRMPAAAGRLNMLFSAT-LSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F ++ + + + ++ QT P + +I ++ Sbjct 207 ELAFEHMNNAEYVEVEPLQKTGHRIQEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ R L+ G V+ + +L +LE +DI+V T Sbjct 267 -------HRCEDIWGHLAADGHRVGLLTGDVSQKRRLRILEKFTQGALDILVAT 313 >sp|A8G828|RHLB_SERP5 ATP-dependent RNA helicase RhlB OS=Serratia proteamaculans (strain 568) OX=399741 GN=rhlB PE=3 SV=1 Length=428 Score = 296 bits (758), Expect = 7e-92, Method: Composition-based stats. Identities = 110/407 (27%), Positives = 176/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q ++ + + Sbjct 51 GQAQTGTGKTLAFLTSTFHYLLSHPAKQDRKINQPRALIMAPTRELAVQIHSDAEALSQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + L+ L GG QL VLE+GVDI+VGT GRL D ++L ++ +VLDEA Sbjct 110 --STGLKMGLAYGGDGYDKQLKVLESGVDILVGTTGRLIDYAKQNYIDLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P V + ++ SATL S+ V++L+ + M+ +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPAV----DQRLNMLFSATL-SYRVRELAFEQMNNAEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E + + P N + RL + L Sbjct 223 PEQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+ IIF TK C+++ + G L GD Sbjct 251 ---------IEEEWPDRCIIFANTKHRCEDVWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + L+ F KG++ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILDDFTKGNLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D + +L Sbjct 353 SGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLSDLPAPKRL 399 Score = 105 bits (262), Expect = 8e-23, Method: Composition-based stats. Identities = 56/352 (16%), Positives = 120/352 (34%), Gaps = 58/352 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVLEALEKKGFQHCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLTSTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + Q +K + + + + + + + G + Sbjct 71 LLSHPAKQD--RKINQPRALIMAPTRELAVQIH--------------SDAEALSQSTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + + + + G Sbjct 115 MGLAYGGDGYDKQLKVLESGV----------DILVGTTGRLIDYA-------KQNYIDLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPAVDQRLNMLFSAT-LSYRVREL 208 Query 241 NFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSREL 298 F + ++ + + + ++ QT P + +I ++ Sbjct 209 AFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ R L+ G VA + +L +L++ +DI+V T Sbjct 267 -----HRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILDDFTKGNLDILVAT 313 >sp|Q8XAT4|RHLB_ECO57 ATP-dependent RNA helicase RhlB OS=Escherichia coli O157:H7 OX=83334 GN=rhlB PE=3 SV=3 Length=421 Score = 296 bits (758), Expect = 7e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFALHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSTFHCLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGANGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 98.3 bits (243), Expect = 2e-20, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 120/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHC 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNQPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|Q329V8|RHLB_SHIDS ATP-dependent RNA helicase RhlB OS=Shigella dysenteriae serotype 1 (strain Sd197) OX=300267 GN=rhlB PE=3 SV=1 Length=421 Score = 296 bits (757), Expect = 7e-92, Method: Composition-based stats. Identities = 113/453 (25%), Positives = 184/453 (41%), Gaps = 71/453 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L ++ ++ + ++ L ++ G + Sbjct 13 DFSLHPKVVEALEKKGFHNCTPIQALALPLTLA--------GRDVAGQAQTGTGKTMAFL 64 Query 271 HSGNAQVTQ----TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S + N P+ALI+ P+RELA Q + + + L+ L GG Sbjct 65 TSMFHYLLSHPAIADRKVNKPRALIMAPTRELAVQIHADAEPLA---EATGLKLGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL VLE+GVDI++GT GRL D +NL ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P + ++ SATL S+ V++L+ + M+ +++++ E + + Sbjct 182 LFRRMPPAN----QRLNMLFSATL-SYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N + RL + L I+E Sbjct 237 YPSNEEKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AIIF TK C+ + + G L GD +R + L+ F +GD Sbjct 256 PDRAIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQKKRLRILDEFTRGD 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL E Sbjct 307 LDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYAL 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + G ++ D T ++L Sbjct 367 NLPAIETYIGHSIPVSKYNPDALMTDLPKPLRL 399 Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats. Identities = 56/354 (16%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P++ +A+E+ + T IQA ++PL L G DV A+TG+GKT AF + Sbjct 11 FSDFSLHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSMFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +K + + + + + + E G + Sbjct 71 LLSHPAIAD--RKVNKPRALIMAPTRELAVQIH--------------ADAEPLAEATGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTT---------------GRLIDYA 149 Query 184 EE--FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAEL 238 ++ + LD + F K+ + L F +PP + + + L Sbjct 150 KQNHINLGAIQVVVLDEADRMYDLGFIKDIRWL---FRRMPPANQRLNMLFSATLSYRVR 206 Query 239 KFNFGEE-EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 + F + ++ + + + ++ QT P +A+I ++ Sbjct 207 ELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGT 346 + ++ ++ R L+ G VA + +L +L +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVAT 313 >sp|P09052|VASA1_DROME ATP-dependent RNA helicase vasa OS=Drosophila melanogaster OX=7227 GN=vas PE=1 SV=3 Length=661 Score = 303 bits (777), Expect = 8e-92, Method: Composition-based stats. Identities = 97/381 (25%), Positives = 160/381 (42%), Gaps = 60/381 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQT--KFLPNAPKALIVEPSRELAEQTLN 304 +A ++ G +++ + + P+ +IV P+RELA Q N Sbjct 277 PVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFN 336 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 ++F L+ ++ GG + R Q + G +V+ TPGRL D V + Sbjct 337 EARKFA---FESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDT 393 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 RF+VLDEAD +L G+S+ + R+ + Q ++ SAT ++++++ + + Sbjct 394 RFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEH----QTLMFSATFP-EEIQRMAGEFLK 448 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 +V + V + VN R Sbjct 449 NYVFVAIGIVGGACSDVKQTIYEVNKYAKR------------------------------ 478 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 S+ I+IL + D I+F TK D L + ++ +F Sbjct 479 -SKLIEILS----------EQADGTIVFVETKRGADFLASFLSEK---------EFPTTS 518 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +HGDR +R+Q L FK G ++ LI T VA+RG+DI + +VIN +P + +YVHRIG Sbjct 519 IHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIG 578 Query 605 RVGRAERMGLAISLVATEKEK 625 R GR G A S EK++ Sbjct 579 RTGRVGNNGRATSFFDPEKDR 599 Score = 103 bits (257), Expect = 1e-21, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 49/103 (48%), Gaps = 4/103 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + I V + + +PT IQ SIP+I G D++ A+TGSGKT AF +P+ Sbjct 244 IQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPI 303 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + E + + G+ S + + ++ FA Sbjct 304 LSKLLEDPHELELGR----PQVVIVSPTRELAIQIFNEARKFA 342 >sp|Q887N8|RHLB_PSESM ATP-dependent RNA helicase RhlB OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=rhlB PE=3 SV=1 Length=397 Score = 295 bits (755), Expect = 9e-92, Method: Composition-based stats. Identities = 114/434 (26%), Positives = 181/434 (42%), Gaps = 70/434 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 D LA E+ +++ FP C G F KD + ++ G Sbjct 10 FHDFNLAPELMHAIQDLG-FPYCT------PIQAGVLGFTLKGKDA-IGRAQTGTGKTAA 61 Query 269 SQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 S Q+TQT P+ALI+ P+REL Q + KY + L + + Sbjct 62 FLISIIEQLTQTPPPAERYMGEPRALIIAPTRELVVQIAKDAADLTKYTN---LNVMTFV 118 Query 325 GGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG+ QL LE DI+V TPGRL D G+++L V +VLDEAD +L G+ Sbjct 119 GGMDFDKQLKQLEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQ 178 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 + ++ Q P Q ++ SAT + DV L+++ P+ V+++ + D V Sbjct 179 VRQIIRQTPH----KGERQTLLFSATF-TEDVMNLAKQWTTDPSIVEIESLNVASDNVEQ 233 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + V K + + + Sbjct 234 HIYAVAGAD----------------------------------------KYKLLYNLVTD 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + ++ ++F K + +E+ ++ G + L GD H+R + LE F++ Sbjct 254 NGWERVMVFANRKDEVRRIEERLVRDG---------VNAAQLSGDVPQHKRIKTLEGFRE 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G +R L+ TDVA RGI I G+ +VIN TLP+ +YVHRIGR GRA G++IS + Sbjct 305 GKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDD 364 Query 624 EKVWYHVCSSRGKG 637 + G+ Sbjct 365 SYQLPAIEEKLGRK 378 Score = 90.6 bits (223), Expect = 5e-18, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 43/94 (46%), Gaps = 2/94 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ A++++ + T IQA + L G D + A+TG+GKT AF I +I Sbjct 8 TRFHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAAFLISII 67 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 + + +T + + + + + Sbjct 68 EQLTQTPPPAE--RYMGEPRALIIAPTRELVVQI 99 >sp|Q5E8U5|RHLB_ALIF1 ATP-dependent RNA helicase RhlB OS=Aliivibrio fischeri (strain ATCC 700601 / ES114) OX=312309 GN=rhlB PE=3 SV=2 Length=432 Score = 296 bits (758), Expect = 9e-92, Method: Composition-based stats. Identities = 119/491 (24%), Positives = 195/491 (40%), Gaps = 79/491 (16%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDG 264 N DLGL ++ + + ++ L ++ + G +A A Sbjct 10 NFADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLTATFN 69 Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 +++ + ++TQ P+A+I+ P+RELA Q N+ + I + L+ L Sbjct 70 HLLTTPAPEGRKITQ-------PRAIIMAPTRELAIQIFNDAESL---IASTGLKAALAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG Q V+E GVDI++GT GR+ D G ++ ++ +VLDEAD + G+ I Sbjct 120 GGERYEKQQQVIEQGVDILIGTTGRIIDFYKQGHIDFKMIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P T ++ SATL S+ V++L+ + M P V ++ E + Sbjct 180 RFIFRRMPAPT----ERLNMLFSATL-SYRVQELAFEHMQEPEHVVVEPEQKTGHRIKEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N L + L I+E Sbjct 235 LFYPSNDHKMALLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AIIF TK C+++ + + L GD +R++ LE F + Sbjct 254 EWPDRAIIFANTKHKCESVWGHL---------AADKHRVGLLTGDVPQKKRERILEEFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G+V L+ TDVAARG+ I V +V N LP+E ++YVHRIGR GRA G +IS E Sbjct 305 GNVDILVATDVAARGLHIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGASGNSISFACEEY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + E Y+ LL ++ L + Sbjct 365 AINLPAIEE----------YIEHSIPQSDYDASALLEDLPAPLRLQRRPQQNRRNNNGQR 414 Query 684 FDGKVTYGQKR 694 G + + R Sbjct 415 QGGNRKHTRPR 425 Score = 108 bits (270), Expect = 7e-24, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 119/351 (34%), Gaps = 56/351 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ P++ + ++ T IQA+++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLQPQVIDGLNAKGFIKCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+K + + + ++ + + G + Sbjct 71 LLTTPAP--EGRKITQPRAIIMAPTRELAIQIFN--------------DAESLIASTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A ++ + +QG+ + +GT G + + ++ Sbjct 115 AALAYGGERYEKQQQVIEQGV----------DILIGTT-------GRIIDFYKQGHIDF- 156 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAELK 239 + + +D+ F KD+ F P N + EL Sbjct 157 KMIQA-------VVLDEADRMFDLGFIKDIRFIFRRMPAPTERLNMLFSATLSYRVQELA 209 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELA 299 F +E + + + S A + +A+I ++ Sbjct 210 FEHMQEPEHVVVEPEQKTGHRIKEELFYPSNDHKMALLQTLIEEEWPDRAIIFANTK--- 266 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ K R L+ G V + + +LE VDI+V T Sbjct 267 ----HKCESVWGHLAADKHRVGLLTGDVPQKKRERILEEFTQGNVDILVAT 313 >sp|Q02748|IF4A_DROME Eukaryotic initiation factor 4A OS=Drosophila melanogaster OX=7227 GN=eIF4A PE=1 SV=3 Length=403 Score = 295 bits (755), Expect = 1e-91, Method: Composition-based stats. Identities = 117/438 (27%), Positives = 191/438 (44%), Gaps = 74/438 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N D+ L E+ + ++ + P G +++A G Sbjct 31 NFDDMNLREELLRGIYGYGFEKPSAIQQRAI----------IPCVRGRDVIAQAQSG-TG 79 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 K+ A + Q +ALI+ P+RELA Q + +Y+ K+ IGG Sbjct 80 KTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYM---KVHSHACIGGT 136 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 R+ +LE+G +VVGTPGR+ D+++ L ++ VLDEAD +LS+G+ D I + Sbjct 137 NVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDV 196 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 +P +QVI+ SAT+ DV ++S M P + +K E+ + + V Sbjct 197 FKMLP------PDVQVILLSATMPP-DVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVN 249 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + +L L Y +I Sbjct 250 VKQENWKL----------------------------------GTLCDLYDTLSIT----- 270 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 Q++IFC T+ D L Q H F+ +HGD + +R+ +++F+ G R Sbjct 271 QSVIFCNTRRKVDQLTQEM---------SIHNFTVSAMHGDMEQRDREVIMKQFRSGSSR 321 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 LI TD+ ARGID+ V VIN LP ++NY+HRIGR GR R G+AI+ + + ++ Sbjct 322 VLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRIL 381 Query 628 YHVCSSRGKGCYNTRLKE 645 + + Y+T ++E Sbjct 382 KDI-----EQFYHTTIEE 394 Score = 97.1 bits (240), Expect = 4e-20, Method: Composition-based stats. Identities = 29/127 (23%), Positives = 56/127 (44%), Gaps = 2/127 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + E+ + + + P+ IQ +I + G DV+ A++G+GKT FSI ++Q Sbjct 32 FDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQ 91 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREVKEW-HG 121 + ++++ Q T + Y + + A IG + +R ++ H Sbjct 92 IDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHV 151 Query 122 CRATKGL 128 T G Sbjct 152 VVGTPGR 158 >sp|P44586|DEAD_HAEIN ATP-dependent RNA helicase DeaD OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=deaD PE=3 SV=1 Length=613 Score = 302 bits (772), Expect = 1e-91, Method: Composition-based stats. Identities = 110/438 (25%), Positives = 185/438 (42%), Gaps = 69/438 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DLGL I + + ++ + + + + +++ G Sbjct 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLN--------GNDVLGMAQTGSGKTAA 58 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + Q P+ L++ P+RELA Q + + F KY R + + GG Sbjct 59 FAL---PLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGT--RIVTLYGGQR 113 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 QL L+ G +VVGTPGR+ D + G LNLS++RF+VLDEAD +L G+ D + + Sbjct 114 YDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLRMGFIDDVETVM 173 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 ++P + Q + SAT+ +++++++ M+ P V +K + + V Sbjct 174 AELP------ENHQTALFSATMPEP-IRRITKRFMNDPQEVKIKVNNENAPDIDQSCWYV 226 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + + K E +R ++ D Sbjct 227 H----------------------------------------GVRKNEALLRFLEVEDFDA 246 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AIIF RTK ++ + + G F L+GD R+Q L+R + G + Sbjct 247 AIIFARTKTGTLDITELLEKNG---------FRSAALNGDMTQQLREQTLDRLRNGSLDI 297 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 ++ TDVAARGIDI + V+N +P + ++YVHRIGR GRA R G A+ V + ++ Sbjct 298 VVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEPRERRLLR 357 Query 629 HVCSSRGKGCYNTRLKED 646 ++ KG L Sbjct 358 NIEHLMKKGINEVELPNH 375 Score = 106 bits (265), Expect = 1e-22, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 0/125 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F+++G+ I +AV ++ + P+ IQ IP +L G DVL A+TGSGKT AF++P++ Sbjct 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 + + K Q T Y +G+ G + G Sbjct 66 QIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGA 125 Query 123 RATKG 127 + G Sbjct 126 QVVVG 130 >sp|Q0UY62|DBP3_PHANO ATP-dependent RNA helicase DBP3 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP3 PE=3 SV=1 Length=592 Score = 301 bits (770), Expect = 1e-91, Method: Composition-based stats. Identities = 118/482 (24%), Positives = 188/482 (39%), Gaps = 85/482 (18%) Query 204 KFSKNG---KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFP-------PKD 253 +KN +D A + N P F Sbjct 157 FLTKNTMTIEDPKPAARKLRPIVNFKYLPVTDESQRAPFAGFTAPTPIQAATWPFLLSGR 216 Query 254 GFVALSKAPDGYIVKS-QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 V +++ G + A ++ K KA+IV P+RELA Q + + Sbjct 217 DMVGVAETGSGKTLAFGVPCVRAILSLPKDKRKGIKAVIVSPTRELAVQIYDQLVALAHP 276 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L + + GGV Q++ IVV TPGRL+DL+ G +LS ++VLDEA Sbjct 277 AG---LSVVCVYGGVPKDPQVAACRK-AHIVVATPGRLNDLIGDGSADLSNADYVVLDEA 332 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L +G+ + I ++ +Q P K+ Q ++ +AT V+ L+ M P + + Sbjct 333 DRMLDKGFEEPIRQIISQTP------KKRQTLMFTATWPP-SVRDLASTFMVSPVRITIG 385 Query 433 GEDS----VPDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 S + +V ++P K RL + L + Sbjct 386 DNQSGELRANVRIKQLVEVLDPHAKEQRLLQLLKQ------------------------- 420 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 ++K D+ ++FC K + +E + +G F +H Sbjct 421 ------------YQSGKNKDDRILVFCLYKKEAMRIENFIRMKG---------FRVGGIH 459 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 GD +R +L FK+G V L+ TDVAARG+DI V VINVT P ++YVHRIGR Sbjct 460 GDLSQEKRSASLAAFKEGQVPLLVATDVAARGLDIPAVKLVINVTFPLTAEDYVHRIGRT 519 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRG-----------KGCYNTRLKEDGGCTIWYNE 655 GRA + GLAI+ + + + + K + KE G +Y + Sbjct 520 GRAGKEGLAITFFTEHDKGLSGSLINVLKAANQEVPEELLKFGTTVKKKEHGAYGAFYKD 579 Query 656 MQ 657 + Sbjct 580 VD 581 Score = 101 bits (252), Expect = 4e-21, Method: Composition-based stats. Identities = 39/141 (28%), Positives = 61/141 (43%), Gaps = 16/141 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F + V E +A + PT IQA + P +L G D++ AETGSGKT AF +P Sbjct 178 IVNFKYLPVTDESQRA-PFAGFTAPTPIQAATWPFLLSGRDMVGVAETGSGKTLAFGVPC 236 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCC-------- 111 ++ + KD+++G K S + + YD+ A A + C Sbjct 237 VRAILSLPKDKRKGIK-----AVIVSPTRELAVQIYDQLVALAHPAGLSVVCVYGGVPKD 291 Query 112 -QSREVKEWHGCRATKGLMKG 131 Q ++ H AT G + Sbjct 292 PQVAACRKAHIVVATPGRLND 312 >sp|P0CQ70|IF4A_CRYNJ ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=TIF1 PE=3 SV=1 Length=401 Score = 295 bits (754), Expect = 1e-91, Method: Composition-based stats. Identities = 115/426 (27%), Positives = 185/426 (43%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN 285 F LK L+ + +G E + + + D +G L Sbjct 30 FDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQR 89 Query 286 ------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +AL++ P+RELA+Q + Y++ + +GG A R+ ++ L G Sbjct 90 IDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLN---VDCHACVGGTAVREDIARLNEG 146 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVVGTPGR+ D+++ G L V LDEAD +LS G+ + I + +P T Sbjct 147 PHIVVGTPGRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESIYEIFQLLPGET---- 202 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ +V +++K M P + +K ++ + + + V + +L Sbjct 203 --QVVLLSATMAP-EVLDVTKKFMRDPIRILVKKDELTLEGIRQFYINVEKEEWKL---- 255 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 E + + QA+IFC T+ Sbjct 256 -----------------------------------ETLCDLYETVTITQAVIFCSTRRKV 280 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L Q + QF+ +HGD K ER+ ++ F+ G R LI TD+ ARGI Sbjct 281 DWLTQQLHDR---------QFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGI 331 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP K+NY+HRIGR GR R G+AI+ V+ E + + + + Y Sbjct 332 DVQQVSLVINYDLPSSKENYIHRIGRGGRFGRKGVAINFVSNEDKNMLEEI-----ETYY 386 Query 640 NTRLKE 645 NT+++E Sbjct 387 NTQVEE 392 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (57%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + E+ + + + P+ IQ +I I+ G D + A++G+GKT FS+ ++Q Sbjct 30 FDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQR 89 Query 64 VYETLKDQQ 72 + T+K Q Sbjct 90 IDTTVKKTQ 98 >sp|P0CQ71|IF4A_CRYNB ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=TIF1 PE=3 SV=1 Length=401 Score = 295 bits (754), Expect = 1e-91, Method: Composition-based stats. Identities = 115/426 (27%), Positives = 185/426 (43%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN 285 F LK L+ + +G E + + + D +G L Sbjct 30 FDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQR 89 Query 286 ------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 +AL++ P+RELA+Q + Y++ + +GG A R+ ++ L G Sbjct 90 IDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLN---VDCHACVGGTAVREDIARLNEG 146 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVVGTPGR+ D+++ G L V LDEAD +LS G+ + I + +P T Sbjct 147 PHIVVGTPGRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESIYEIFQLLPGET---- 202 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ +V +++K M P + +K ++ + + + V + +L Sbjct 203 --QVVLLSATMAP-EVLDVTKKFMRDPIRILVKKDELTLEGIRQFYINVEKEEWKL---- 255 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 E + + QA+IFC T+ Sbjct 256 -----------------------------------ETLCDLYETVTITQAVIFCSTRRKV 280 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L Q + QF+ +HGD K ER+ ++ F+ G R LI TD+ ARGI Sbjct 281 DWLTQQLHDR---------QFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGI 331 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP K+NY+HRIGR GR R G+AI+ V+ E + + + + Y Sbjct 332 DVQQVSLVINYDLPSSKENYIHRIGRGGRFGRKGVAINFVSNEDKNMLEEI-----ETYY 386 Query 640 NTRLKE 645 NT+++E Sbjct 387 NTQVEE 392 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (57%), Gaps = 0/69 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + E+ + + + P+ IQ +I I+ G D + A++G+GKT FS+ ++Q Sbjct 30 FDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQR 89 Query 64 VYETLKDQQ 72 + T+K Q Sbjct 90 IDTTVKKTQ 98 >sp|A0KEG9|RHLB_AERHH ATP-dependent RNA helicase RhlB OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=rhlB PE=3 SV=1 Length=429 Score = 295 bits (756), Expect = 1e-91, Method: Composition-based stats. Identities = 116/494 (23%), Positives = 193/494 (39%), Gaps = 80/494 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 + +GL E+ ++++ ++ L ++ G Sbjct 8 TDKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPL--------LVEGHDLAGQAQTGTGK 59 Query 266 IVKSQHSG-NAQVTQTKFLP---NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 + + N +T P N P+A+I+ P+RELA Q N+ + + L+ Sbjct 60 TLAFLAATFNYLLTHPLTKPRLINQPRAIIMAPTRELAVQIYNDAESMSA---STGLKLG 116 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 L GG QL+VLE GVDI++GT GR+ D + ++LS ++ +VLDEAD + G+ Sbjct 117 LAYGGEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFI 176 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I + ++P T ++ SATL S V++L+ + M+ P V ++ E + Sbjct 177 KDIRFLFRRMPPAT----ERLSMLFSATL-SLRVQELAYEHMNHPEHVQIEPEQMTGVRI 231 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 E K + + Sbjct 232 K----------------------------------------EELFYPSNEDKMLLLLSLM 251 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 +E ++AI+F TK C+++ + G L GD +R + LE F Sbjct 252 EEEWPEKAIVFANTKHVCEDVHAWLENDG---------HRVGLLTGDVPQKKRMKILEDF 302 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 KG V L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G +ISL Sbjct 303 TKGTVDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLACE 362 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 + + Y+ LL ++ +P + Sbjct 363 DYAFNLPAIEE----------YIHHPIPVSKYDREALLDDVTAP-KRVFRNRQPVNRNMR 411 Query 682 DEFDGKVTYGQKRA 695 D G + ++R Sbjct 412 DRQGGGNSNNRRRP 425 Score = 103 bits (256), Expect = 5e-22, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 114/352 (32%), Gaps = 58/352 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++MG+ PE+ +E + T IQA S+PL++ G D+ A+TG+GKT AF Sbjct 11 FAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKTLAFLAATFNY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + I + + + Y+ + + Sbjct 71 LLTHPLTKPRLINQPRAI--IMAPTRELAVQIYNDAESMS-------------------- 108 Query 124 ATKGLMKGKHYYEVSCHDQGL-CRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNY 182 A+ GL G Y +G ++ + +GT + K + Sbjct 109 ASTGLKLGLAY-----GGEGYDKQLAVLEQGVDILIGTTGRIIDY--FKSKVIDLSNIQ- 160 Query 183 GEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPP---HMKNQALFPACVLKNAEL 238 + +D+ F KD+ F P + L+ EL Sbjct 161 ------------VVVLDEADRMFDLGFIKDIRFLFRRMPPATERLSMLFSATLSLRVQEL 208 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 + + + + + S + KA++ ++ Sbjct 209 AYEHMNHPEHVQIEPEQMTGVRIKEELFYPSNEDKMLLLLSLMEEEWPEKAIVFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + +++N R L+ G V + ++ +LE+ VDI+V T Sbjct 267 -----HVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILEDFTKGTVDILVAT 313 >sp|Q75BS4|DHH1_EREGS ATP-dependent RNA helicase DHH1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DHH1 PE=3 SV=1 Length=484 Score = 297 bits (761), Expect = 1e-91, Method: Composition-based stats. Identities = 110/487 (23%), Positives = 184/487 (38%), Gaps = 88/487 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D L E+ + ++ + L++A +G K Sbjct 31 FEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALAR----------RDILARAKNG-TGK 79 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + K N +ALI+ P+RELA QT ++ K+ + ++ GG Sbjct 80 TAAFVIPTLEIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTN 136 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L V ++VGTPGR+ DL S +LS+ V+DEAD +LS+ + + ++ Sbjct 137 LRDDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKSLVEQIL 196 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + +PQ Q ++ SAT VK+ K ++ P ++L E ++ + V Sbjct 197 SFLPQ------NHQSLLFSATFP-LTVKEFMVKHLNKPYEINLMDELTLK-GITQYYAFV 248 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + +++Q Sbjct 249 EERQ----------------------------------------KLHCLNTLFSKLQINQ 268 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AIIFC + + L + G +SC H K ER + F++G VR Sbjct 269 AIIFCNSTNRVELLAKKITDLG---------YSCYYSHARMKQQERNKVFHEFRQGKVRT 319 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ Y Sbjct 320 LVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLY 379 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKV 688 + G + ++I++ L + P+D G Sbjct 380 KIEQELGT-----------------EIAAIPAQIDKSLYVAEDTSAVPVPFPLDTMQGNA 422 Query 689 TYGQKRA 695 Q+ Sbjct 423 RAAQQMP 429 Score = 95.2 bits (235), Expect = 3e-19, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 9/92 (10%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ L D+L A+ G+GKT AF IP ++ Sbjct 30 TFEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLE 89 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 IV + Q + + Sbjct 90 IVKPKVNKIQ---------ALIMVPTRELALQ 112 >sp|P0CQ74|DED1_CRYNJ ATP-dependent RNA helicase ded1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DED1 PE=3 SV=1 Length=637 Score = 302 bits (773), Expect = 1e-91, Method: Composition-based stats. Identities = 87/355 (25%), Positives = 144/355 (41%), Gaps = 54/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q ++F +R ++ GG Q+ L+ G D++ T Sbjct 248 PTALVLAPTRELVSQIHEEARKFA---YRSWVRPAVVYGGADIGSQMRALDRGCDLLSAT 304 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ GK++L+ V++LVLDEAD +L G+ I R+ ++ + Q ++ Sbjct 305 PGRLVDLIERGKISLANVKYLVLDEADRMLDMGFEPQIRRIVDE--EDMPGVLERQTLMF 362 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT +++ L+ + ++ + S + + V V+ + R Sbjct 363 SATFP-REIQNLARSFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKR------------ 409 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + E ++F TK D L + Sbjct 410 ---------------------------SLLLDLLLAEQSGGLILVFVETKRMADTLCDFL 442 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + + +HGDR ER+ L FK G L+ T VAARG+DI V + Sbjct 443 C---------SRRHNATSIHGDRTQREREAALYAFKSGRAPILVATAVAARGLDIPNVTH 493 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VI LP++ Y HRIGR GRA +G + + + + + Sbjct 494 VILYDLPNDVAEYTHRIGRTGRAGNVGTSTAFFNRGNTNIGKDLIELLKEANQEV 548 Score = 92.5 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + P + + V+ + PT +Q SIP++ G D++ A+TGSGKTG F P+ Sbjct 159 VTEFTNPPINPVLLENVKYARYATPTPVQKYSIPIVADGRDLMACAQTGSGKTGGFLFPI 218 Query 61 IQIVYETLKDQQE-------GKKGKTTIKTGAS---VLNKWQMNPYDRGSAFAIGS 106 + ++ G + + A + ++ FA S Sbjct 219 LSALFTYGPSTPPVEQDTGYGYRRTKKVYPTALVLAPTRELVSQIHEEARKFAYRS 274 >sp|P0CQ75|DED1_CRYNB ATP-dependent RNA helicase ded1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DED1 PE=3 SV=1 Length=637 Score = 302 bits (773), Expect = 1e-91, Method: Composition-based stats. Identities = 87/355 (25%), Positives = 144/355 (41%), Gaps = 54/355 (15%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P AL++ P+REL Q ++F +R ++ GG Q+ L+ G D++ T Sbjct 248 PTALVLAPTRELVSQIHEEARKFA---YRSWVRPAVVYGGADIGSQMRALDRGCDLLSAT 304 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL DL+ GK++L+ V++LVLDEAD +L G+ I R+ ++ + Q ++ Sbjct 305 PGRLVDLIERGKISLANVKYLVLDEADRMLDMGFEPQIRRIVDE--EDMPGVLERQTLMF 362 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT +++ L+ + ++ + S + + V V+ + R Sbjct 363 SATFP-REIQNLARSFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKR------------ 409 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + E ++F TK D L + Sbjct 410 ---------------------------SLLLDLLLAEQSGGLILVFVETKRMADTLCDFL 442 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + + +HGDR ER+ L FK G L+ T VAARG+DI V + Sbjct 443 C---------SRRHNATSIHGDRTQREREAALYAFKSGRAPILVATAVAARGLDIPNVTH 493 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 VI LP++ Y HRIGR GRA +G + + + + + Sbjct 494 VILYDLPNDVAEYTHRIGRTGRAGNVGTSTAFFNRGNTNIGKDLIELLKEANQEV 548 Score = 92.5 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ + P + + V+ + PT +Q SIP++ G D++ A+TGSGKTG F P+ Sbjct 159 VTEFTNPPINPVLLENVKYARYATPTPVQKYSIPIVADGRDLMACAQTGSGKTGGFLFPI 218 Query 61 IQIVYETLKDQQE-------GKKGKTTIKTGAS---VLNKWQMNPYDRGSAFAIGS 106 + ++ G + + A + ++ FA S Sbjct 219 LSALFTYGPSTPPVEQDTGYGYRRTKKVYPTALVLAPTRELVSQIHEEARKFAYRS 274 >sp|Q2GQ93|DHH1_CHAGB ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DHH1 PE=3 SV=1 Length=512 Score = 298 bits (763), Expect = 2e-91, Method: Composition-based stats. Identities = 109/466 (23%), Positives = 178/466 (38%), Gaps = 71/466 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 + +D GL ++ + ++ + G L++A +G Sbjct 11 LDFEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALV----------GRDILARAKNG-T 59 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 K+ + + + + LI+ P+RELA QT K K++ + ++ GG Sbjct 60 GKTAAFVIPALEKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLG---INVMVTTGG 116 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 RD + L++ V IVVGTPGR+ DL +LS+ ++DEAD LLS ++ I + Sbjct 117 TGLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLLSIEFTPVIEQ 176 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + P K QV++ SAT VK S+K M P ++L ++ + Sbjct 177 LLRFHP------KDRQVMLFSATFP-ISVKDFSDKNMTSPYEINLM-DELTLRGITQYYA 228 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 V K K + ++ Sbjct 229 YVEEKQ----------------------------------------KVHCLNTLFSKLQI 248 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +Q+IIFC + + L + + G +SC H R + F+ G Sbjct 249 NQSIIFCNSTNRVELLAKKITELG---------YSCFYSHAKMAQQARNRVFHDFRNGVC 299 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Sbjct 300 RNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFN 359 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 Y++ G D ++ N + I I Q Sbjct 360 LYNIERDLGTEIQPIPQTIDKSLYVYENPESIPRPISNLKPAGIQQ 405 Score = 102 bits (254), Expect = 1e-21, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + G+ ++ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 13 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALEK 72 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + + Q + M Sbjct 73 INPKVSKIQ---------CLILVPTRELAMQ 94 >sp|Q9C551|RH5_ARATH DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana OX=3702 GN=RH5 PE=1 SV=1 Length=537 Score = 299 bits (765), Expect = 2e-91, Method: Composition-based stats. Identities = 104/395 (26%), Positives = 182/395 (46%), Gaps = 68/395 (17%) Query 252 KDGFVALSKAPDGYIVKS-QHSGNAQVTQTKFLPNA-----PKALIVEPSRELAEQTLNN 305 + ++K G + + + + K + P L++ P+RELA Q + Sbjct 151 GRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDV 210 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 +++ + L+ + + GG + Q+S + +GVDIV+GTPGRL DL+ + L LS V Sbjct 211 LREAGEPCG---LKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVS 267 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM-H 424 F+VLDEAD +L G+ + + + + + K Q+++ SAT DV KL+++ M Sbjct 268 FVVLDEADRMLDMGFEEPVRFILS------NTNKVRQMVMFSATWP-LDVHKLAQEFMDP 320 Query 425 FPTWVDLKGEDSVPD-TVHHVVVPVNPKT--DRLWERLGKSHIRTDDVHAKDNTRPGANS 481 P V + D + V ++ ++ + RL L K H Sbjct 321 NPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYH------------------ 362 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + + ++ ++F K++ + LE++ Q+G + Sbjct 363 ---------------------KSQKNRVLVFALYKVEAERLERFLQQRG---------WK 392 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 V +HG++ ER ++L FK+G L+ TDVAARG+DI V VIN T P ++YVH Sbjct 393 AVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVH 452 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RIGR GRA + G+A + + + + + + Sbjct 453 RIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVLRE 487 Score = 105 bits (261), Expect = 3e-22, Method: Composition-based stats. Identities = 32/146 (22%), Positives = 56/146 (38%), Gaps = 7/146 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+E + + + + P+ IQ+ + P +L G D++ A+TGSGKT AF IP Sbjct 115 LKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPA 172 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 I V + K G K S + + D + G C + + + Sbjct 173 IMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDV-----LREAGEPCGLKSICVYG 227 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCR 146 G + + ++ G R Sbjct 228 GSSKGPQISAIRSGVDIVIGTPGRLR 253 >sp|A1DL85|SUB2_NEOFI ATP-dependent RNA helicase sub2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=sub2 PE=3 SV=1 Length=441 Score = 295 bits (756), Expect = 2e-91, Method: Composition-based stats. Identities = 99/382 (26%), Positives = 161/382 (42%), Gaps = 63/382 (16%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 L +A G + K+ + Q + +P L++ +RELA Q N +F KY+ Sbjct 97 DVLCQAKSG-LGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL-- 153 Query 316 PKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P ++ + GG + + VL N +IVVGTPGRL+ LV KL+L V+ VLDE Sbjct 154 PDVKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDEC 213 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L + R +I + T K QV++ SATL S +++ + +K M P V + Sbjct 214 DKMLD---QIDMRRDVQEIFRATPADK--QVMMFSATL-SQEIRPICKKFMRNPLEVYVD 267 Query 433 GEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + + ++ Sbjct 268 DDTKLTLHGLQQYYIKLSESE--------------------------------------- 288 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + +Q IIF ++ + + L++ + F + +H Sbjct 289 -KNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRE---------CNFPSIAVHSGVSQ 338 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 ER + + FK+ + R + TDV RGIDI + IN LP + +Y+HR+GR GR Sbjct 339 EERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGT 398 Query 612 MGLAISLV-ATEKEKVWYHVCS 632 GL+IS V + E EKV + Sbjct 399 KGLSISFVSSEEDEKVLKEIEK 420 Score = 71.3 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (51%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 58 TGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTL 117 Query 62 QIV 64 + Sbjct 118 HQL 120 >sp|Q0D8N0|RH53_ORYSJ DEAD-box ATP-dependent RNA helicase 53 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0143700 PE=2 SV=2 Length=602 Score = 300 bits (769), Expect = 2e-91, Method: Composition-based stats. Identities = 108/403 (27%), Positives = 176/403 (44%), Gaps = 65/403 (16%) Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA---PKALIVEPSRELAEQTLNNIK 307 + ++ G + ++ + + P A+I+ P+RELA Q K Sbjct 120 QGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEKEFK 179 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 + + L L + GGV Q+ L GVD+VVGTPGR+ DL+ G LNLS+++F+ Sbjct 180 E------SAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFV 233 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDEAD +L+ G+ + + + +PQ Q ++ SAT+ S+ ++K++ K + P Sbjct 234 VLDEADQMLAVGFDEDVEVIMENLPQ------NRQSMLFSATMPSW-IRKITSKYLKDPI 286 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 +DL G++ +L E + I ++ Sbjct 287 IIDLVGDE----------------DQKLPEGISLYSIASEHYG----------------- 313 Query 488 AIKILKGEYAVRAIKEH-KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 K IKEH + I+F +TK + D L G ++C LH Sbjct 314 -----KPSILGPLIKEHANGGKCIVFTQTKREADRLAYAM----------GRSYACQALH 358 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 GD ++R++ L F+ G L+ TDVAARG+DI V VI+ LP+ + +VHR GR Sbjct 359 GDISQNQRERTLSGFRDGRFNILVATDVAARGLDIPNVDLVIHYELPNTSELFVHRSGRT 418 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGC 649 RA + G AI + ++ + + G E Sbjct 419 ARAGKKGSAILIYTNDQARAVRIIEQDIGCKFTELPKIEVADE 461 Score = 87.5 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 105/348 (30%), Gaps = 60/348 (17%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 +G+ P I + + IQ + + G D++ A TG+GKT AF IP++ + Sbjct 89 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR 148 Query 67 TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATK 126 ++ G+ + + + A D LC + G + Sbjct 149 H---NEKNGSGRNPLAIILAPTRELARQVEKEFKESAP-LDSLCV-------YGGVPISH 197 Query 127 GLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEF 186 + + +V G R+ + L+L + F + FD Sbjct 198 QMRALNYGVDVVVGTPG--RIIDLLRRGVLNL--SEIQFVVLDEADQMLAVGFD------ 247 Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLK-NAELKFNFGEE 245 +D+ + E P + LF A + ++ + ++ Sbjct 248 -----------------------EDVEVIMENLPQNRQSMLFSATMPSWIRKITSKYLKD 284 Query 246 EFKFP-PKDGFVALSKAPDGYIVKSQHSGNAQVT--QTKFLPNAPKALIVEPSRELAEQT 302 D L + Y + S+H G + K N K ++ QT Sbjct 285 PIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLIKEHANGGKCIVFT-------QT 337 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE----NGVDIVVGT 346 + + + G ++ + L +I+V T Sbjct 338 KREADRLAYAMGRSY-ACQALHGDISQNQRERTLSGFRDGRFNILVAT 384 >sp|A7MXT4|RHLB_VIBC1 ATP-dependent RNA helicase RhlB OS=Vibrio campbellii (strain ATCC BAA-1116) OX=2902295 GN=rhlB PE=3 SV=1 Length=437 Score = 295 bits (756), Expect = 2e-91, Method: Composition-based stats. Identities = 117/494 (24%), Positives = 197/494 (40%), Gaps = 86/494 (17%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DLGL ++ ++ + ++ L ++ ++ G + Sbjct 11 FADLGLKPQVTEGLEKKGFEYCTPIQALALPVLLTGQD--------IAGQAQTGTGKTLA 62 Query 269 SQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + T P P+A+I+ P+RELA Q N+ I + L+ L Sbjct 63 FLTATFNHLLTTPEHEGRKPTQPRAIIMAPTRELAIQIFNDAAPL---IASTGLKAALAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + QL+ L++GVDI++GT GR+ D NL+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDKQLAKLQDGVDILIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P+ K ++ SATL S+ V++L+ + MH P V ++ E + Sbjct 180 RFLFRRMPE----PKERLNMLFSATL-SYRVQELAFEHMHNPEHVVVEPEQKTGHRIQEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N L + L I+E Sbjct 235 LFYPSNEDKMALLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AI+F TK C+++ + G L GD +R++ LE+F + Sbjct 254 EWPDRAIVFANTKHKCESIWGHLAADG---------HRVGLLTGDVPQKKREKILEQFTR 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G+V L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +IS + Sbjct 305 GEVDLLVATDVAARGLHIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGASGHSISFACEDY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + E Y+ L+ ++ L ++ Sbjct 365 AINLPPIEE----------YIEHAIPVSDYDASALIQDLPAPL-----RMRAPRTQQRRT 409 Query 684 FDGKVTYGQKRAAG 697 G G ++ G Sbjct 410 NTGGTRSGNRKPQG 423 Score = 102 bits (254), Expect = 9e-22, Method: Composition-based stats. Identities = 56/352 (16%), Positives = 118/352 (34%), Gaps = 58/352 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLKPQVTEGLEKKGFEYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T + EG+K + + + ++ + + G + Sbjct 71 LLTTP--EHEGRKPTQPRAIIMAPTRELAIQIFN--------------DAAPLIASTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A + +++ G+ + +GT + D Y Sbjct 115 AALAYGGESYDKQLAKLQDGV----------DILIGTTG--------------RIIDFYK 150 Query 184 EE-FTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAEL 238 + F +++ LD + F KD+ F P N + EL Sbjct 151 QRVFNLNNIQAVVLD--EADRMFDLGFIKDIRFLFRRMPEPKERLNMLFSATLSYRVQEL 208 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 F + + + S A + +A++ ++ Sbjct 209 AFEHMHNPEHVVVEPEQKTGHRIQEELFYPSNEDKMALLQTLIEEEWPDRAIVFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ R L+ G V + + +LE VD++V T Sbjct 267 -----HKCESIWGHLAADGHRVGLLTGDVPQKKREKILEQFTRGEVDLLVAT 313 >sp|A0KS84|RHLB_SHESA ATP-dependent RNA helicase RhlB OS=Shewanella sp. (strain ANA-3) OX=94122 GN=rhlB PE=3 SV=1 Length=439 Score = 295 bits (756), Expect = 2e-91, Method: Composition-based stats. Identities = 107/451 (24%), Positives = 176/451 (39%), Gaps = 73/451 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL L E+ + ++ L ++ G + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLL--------QSKDIAGQAQTGTGKTMA 62 Query 269 SQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 + +P N P+A+I+ P+RELA Q + K+ L+ ++ Sbjct 63 FLV-ATFNHLLSTPVPENRQLNQPRAIIMAPTRELAIQIAKDAILLAKH---SHLKVGIV 118 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + Q L+ GVDI++GT GR+ D V G +NL ++ +VLDEAD + G+ Sbjct 119 YGGESYDVQRKTLDQGVDILIGTTGRIIDYVRQGIINLGGIQAVVLDEADRMFDLGFIKD 178 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH- 442 I + ++P + ++ SATL S V++L+ M+ P V++ E+ + Sbjct 179 IRFLFRRMPSA----DQRLNMLFSATL-SMKVQELAYDHMNEPVKVEIAPEEKTSKNIKE 233 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + P RL + I+ Sbjct 234 EIFYPSQEDKMRL-----------------------------------------LLTLIE 252 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 E ++AI+F TK C+NL + +G L GD +R + LE+F Sbjct 253 EDWPEKAIVFSNTKHSCENLWSWL---------EGDGHRVGLLTGDVPQKKRIRILEQFT 303 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G+++S E Sbjct 304 QGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEE 363 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + + + D Sbjct 364 YALNLPAIETYINHSIPVSNYDRDALLEDIP 394 Score = 101 bits (252), Expect = 1e-21, Method: Composition-based stats. Identities = 62/351 (18%), Positives = 118/351 (34%), Gaps = 56/351 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + PE+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T E ++ + + + A S + + R Sbjct 71 LLSTP--VPENRQLNQPRAIIMAPTRELAIQIAKDAILLAKHSHLKVGIVYGGESYDVQR 128 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 T L +G ++ G R+ Q ++LG G ++ Sbjct 129 KT--LDQGV---DILIGTTG--RIIDYVRQGIINLG-----------GIQA--------- 161 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHM---KNQALFPACVLKNAELK 239 + +D+ F KD+ F P N +K EL Sbjct 162 ------------VVLDEADRMFDLGFIKDIRFLFRRMPSADQRLNMLFSATLSMKVQELA 209 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELA 299 ++ E K + SQ + KA++ ++ Sbjct 210 YDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQEDKMRLLLTLIEEDWPEKAIVFSNTK--- 266 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + +++ R L+ G V + ++ +LE +DI+V T Sbjct 267 ----HSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVAT 313 >sp|A1DG51|DBP3_NEOFI ATP-dependent RNA helicase dbp3 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp3 PE=3 SV=1 Length=503 Score = 297 bits (761), Expect = 2e-91, Method: Composition-based stats. Identities = 110/397 (28%), Positives = 167/397 (42%), Gaps = 65/397 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT---QTKFLPNAPKALIVEPSRELAEQTL 303 + +++ G + ++ + K P A+I+ P+RELA Q Sbjct 117 PLLFAGRDVIGIAETGSGKTLAFGLPCIKKILDSGKVKRKHARPAAVIISPTRELAMQIY 176 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 + Q K+ + +R I GGV +Q L+ IVV TPGRL DL + G ++L + Sbjct 177 D---QLSKFGASVDIRVTCIYGGVKKDEQREALKTAA-IVVATPGRLKDLQNDGSVDLGK 232 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 V++LVLDEAD +L +G+ I + +P + Q ++ +AT V+ L+ M Sbjct 233 VKYLVLDEADRMLDKGFEQDIKDIIRSMPD-----SKRQTVMFTATWPP-SVRDLAATFM 286 Query 424 HFPTWVDLKGEDSV----PDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRP 477 V + G+ S + VV V P K RL + L +S Sbjct 287 TSAVTVTIGGDPSADPRANTRIKQVVEVVKPQEKEARLVQLLNRSQRGAAVC-------- 338 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 D+ ++FC K + +E+ + Sbjct 339 -----------------------------DKVLVFCLYKKEAVRVERLL---------RT 360 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 F +HGD HER ++LE FK G L+ TDVAARG+DI V VINVT P + Sbjct 361 KNFKVAGIHGDLNQHERFKSLEAFKTGAATVLVATDVAARGLDIPSVKLVINVTFPLTVE 420 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 +YVHRIGR GRA G AI+L + + + Sbjct 421 DYVHRIGRTGRAGADGHAITLFTETDKAQSGALINVL 457 Score = 105 bits (263), Expect = 1e-22, Method: Composition-based stats. Identities = 40/143 (28%), Positives = 64/143 (45%), Gaps = 18/143 (13%) Query 1 MAAFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 + +FS + P + + + PT IQ+ + PL+ G DV+ AETGSGKT AF + Sbjct 85 IISFSHL---PSSFSKIYDPLSSFSSPTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGL 141 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC------ 111 P I+ + ++ K +++ + I S + M YD+ S F D + C Sbjct 142 PCIKKILDSGKVKRKHARPAAVI---ISPTRELAMQIYDQLSKFGASVDIRVTCIYGGVK 198 Query 112 ---QSREVKEWHGCRATKGLMKG 131 Q +K AT G +K Sbjct 199 KDEQREALKTAAIVVATPGRLKD 221 >sp|Q5R5F5|IF4A1_PONAB Eukaryotic initiation factor 4A-I OS=Pongo abelii OX=9601 GN=EIF4A1 PE=2 SV=1 Length=406 Score = 294 bits (752), Expect = 3e-91, Method: Composition-based stats. Identities = 112/425 (26%), Positives = 186/425 (44%), Gaps = 74/425 (17%) Query 231 CVLKNAELK--FNFGEEEFKFPPKD-------GFVALSKAPDGYIVKSQHSGNAQVTQTK 281 L + L+ + +G E+ + G+ +++A G K+ + + Q + Sbjct 37 MNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSG-TGKTATFAISILQQIE 95 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-V 340 A +AL++ P+RELA+Q + Y+ IGG R ++ L+ Sbjct 96 LDLKATQALVLAPTRELAQQIQKVVMALGDYMGAS---CHACIGGTNVRAEVQKLQMEAP 152 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 I+VGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 153 HIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL------NSN 206 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 QV++ SAT+ S DV ++++K M P + +K E+ + + + V + +L Sbjct 207 TQVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKL----- 260 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 L Y I QA+IF T+ D Sbjct 261 -----------------------------DTLCDLYETLTIT-----QAVIFINTRRKVD 286 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L + F+ +HGD ER + F+ G R LI TD+ ARGID Sbjct 287 WLTEKM---------HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 337 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 + V VIN LP ++NY+HRIGR GR R G+AI++V E ++ + + YN Sbjct 338 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI-----ETFYN 392 Query 641 TRLKE 645 T ++E Sbjct 393 TSIEE 397 Score = 89.8 bits (221), Expect = 9e-18, Method: Composition-based stats. Identities = 27/131 (21%), Positives = 51/131 (39%), Gaps = 3/131 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I + Sbjct 31 VDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISI 90 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI---GSDGLCCQSREVK 117 +Q + LK Q T + Y S A + Q +++ Sbjct 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150 Query 118 EWHGCRATKGL 128 H T G Sbjct 151 APHIIVGTPGR 161 >sp|Q2H0R2|DBP10_CHAGB ATP-dependent RNA helicase DBP10 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP10 PE=3 SV=1 Length=762 Score = 305 bits (780), Expect = 3e-91, Method: Composition-based stats. Identities = 111/454 (24%), Positives = 177/454 (39%), Gaps = 36/454 (8%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 K F A L + L+ + F P + + V + T Sbjct 79 SKSAKKSGGFQAMGLNSNLLR-AISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKT 137 Query 279 QTKFLPN-----------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 +P +A+I+ PSRELA QTL +K+ K L+ +L++GG Sbjct 138 AAFVIPMIERLKAHSARVGARAIIMSPSRELALQTLKVVKELGK---GTDLKTVLLVGGD 194 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 + +Q ++ DI++ TPGR L LNLS VR++V DEAD L G++ + + Sbjct 195 SLEEQFGLMAANPDIIIATPGRFLHLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLTEI 254 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + +P Q ++ SATL S V+ + + P+ + L E V + Sbjct 255 LHALP------PSRQTLLFSATLPSSLVE-FARAGLQEPSLIRLDAETKVSPDLESAFFS 307 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V HI D + G +A K + ++ Sbjct 308 VKGGEKEG----ALLHILHDVIKMPLGVPEGIEEETDEQQARKRKRDSERRNRKEKPTEH 363 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 IIF TK + + G FS ++G RK ++ F++G Sbjct 364 STIIFTATKHHVEYIAHLLRHAG---------FSVSYIYGSLDQTARKIQVDNFRRGRTN 414 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARGIDI + VIN P + + +VHR+GR RA + G A +L+ Sbjct 415 ILVVTDVAARGIDIPVLANVINYDFPPQPKIFVHRVGRTARAGQRGWAYALLQGTSRPCG 474 Query 628 YHVCSSRGKGC-YNTRLKEDGGCTIWYNEMQLLS 660 V R + TR+ + T W + + + Sbjct 475 GRVRRMRTQRWRMQTRMNQPLRKTKWTSSPEKTN 508 Score = 104 bits (259), Expect = 9e-22, Method: Composition-based stats. Identities = 58/361 (16%), Positives = 114/361 (32%), Gaps = 47/361 (13%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IPL+L DV+ A TGSGKT AF IP+I+ Sbjct 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD---GLCCQSREVKEWH 120 + + G I S + + G+D L ++E Sbjct 148 LKAHS-----ARVGARAI--IMSPSRELALQTLKVVKELGKGTDLKTVLLVGGDSLEEQF 200 Query 121 GCRATKGLMKGKHYYEVSCHDQG-------LCRVGWSTMQA-SLDLGTDKFGFGFGGTGK 172 G A ++ G + S+++ D F GF Sbjct 201 GLMAANP--------DIIIATPGRFLHLKVEMSLNLSSVRYVVFDEADRLFEMGFAAQLT 252 Query 173 KSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV 232 + + T+ + V+F++ G + K + Sbjct 253 EILHAL-----PPSRQ--TLLFSATLPSSLVEFARAGLQEPSLIRLDAETKVSPDLESAF 305 Query 233 LKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ---TKFLPNAPKA 289 + + + + + + Q + ++ K P Sbjct 306 FSVKGGEKEGALLHILHDVIKMPLGVPEGIEEETDEQQARKRKRDSERRNRKEKPTEHST 365 Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG---VAARDQLSVLENG-VDIVVG 345 +I ++ ++++ + + I G A + Q+ G +I+V Sbjct 366 IIFTATK-------HHVEYIAHLLRHAGFSVSYIYGSLDQTARKIQVDNFRRGRTNILVV 418 Query 346 T 346 T Sbjct 419 T 419 >sp|Q0CL13|DBP3_ASPTN ATP-dependent RNA helicase dbp3 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp3 PE=3 SV=1 Length=493 Score = 297 bits (759), Expect = 3e-91, Method: Composition-based stats. Identities = 113/418 (27%), Positives = 177/418 (42%), Gaps = 76/418 (18%) Query 226 ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG---NAQVTQTKF 282 + +++A FG + +++ G + + K Sbjct 97 SFKSPTSIQSATWPLLFG--------GRDVIGIAETGSGKTLAFGLPCLKKIEDSKKKKS 148 Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 P P A+I+ P+RELA Q + Q +K+ + I GGV +Q VL+ +I Sbjct 149 KPYQPMAVIISPTRELAMQIHD---QLQKFAGPVGAKVACIFGGVRKDEQREVLKT-ANI 204 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 VV TPGRL DL + G ++L +VR+LVLDEAD +L +G+ I + +P + Q Sbjct 205 VVATPGRLKDLQNDGSVDLGKVRYLVLDEADRMLDKGFEQDIKDIIQPMPV-----SKRQ 259 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS----VPDTVHHVVVPVNPKTDRLWER 458 ++ +AT V++L+ M P V + G+ S + VV V P Sbjct 260 TVMFTATWPPV-VRELASTFMSSPVTVTIGGDPSADPRANTRIKQVVEVVKPHE------ 312 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK--MDQAIIFCRTK 516 K V+ +K+H+ ++ + FC K Sbjct 313 ----------------------------------KEGRLVQLLKQHQRGAEKVLAFCLYK 338 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + +E++ +G F +HGD ER ++L+ FK G L+ TDVAA Sbjct 339 KEATRIERFLQSRG---------FKVAGIHGDLSQQERFRSLDAFKTGAATVLVATDVAA 389 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 RG+DI V VINVT P ++YVHRIGR GRA G AI+L + + + Sbjct 390 RGLDIPAVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLFTETDKAQSGALINVL 447 Score = 93.3 bits (230), Expect = 1e-18, Method: Composition-based stats. Identities = 40/143 (28%), Positives = 65/143 (45%), Gaps = 18/143 (13%) Query 1 MAAFSEMGVMPEIAQAVEEM--DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 + +FS + PE + E + PT IQ+ + PL+ GG DV+ AETGSGKT AF + Sbjct 78 IISFSHL---PECNSNLYEQLNSFKSPTSIQSATWPLLFGGRDVIGIAETGSGKTLAFGL 134 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCC------ 111 P ++ + ++ K + + + I S + M +D+ FA + C Sbjct 135 PCLKKIEDSKKKKSKPYQPMAVI---ISPTRELAMQIHDQLQKFAGPVGAKVACIFGGVR 191 Query 112 ---QSREVKEWHGCRATKGLMKG 131 Q +K + AT G +K Sbjct 192 KDEQREVLKTANIVVATPGRLKD 214 >sp|A6R3R5|IF4A_AJECN ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=TIF1 PE=3 SV=1 Length=385 Score = 293 bits (750), Expect = 4e-91, Method: Composition-based stats. Identities = 109/416 (26%), Positives = 178/416 (43%), Gaps = 66/416 (16%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F A L+ L+ + +G E + + + K D +G + + + Sbjct 27 FDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQK 86 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 A +ALI+ P+RELA+Q + ++ + IGG++ R+ + L++G Sbjct 87 VDTNLKACQALILAPTRELAQQIQKVVVAIGDFMS---IECHACIGGISVREDMKALQDG 143 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VVGTPGR+ D++ L ++ VLDEAD +LS G+++ I + +PQ T Sbjct 144 PQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEMLSHGFTEQIYDIFQFLPQST---- 199 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K + + + + V + +L Sbjct 200 --QVVLLSATMP-QDVLEVTTKFMRDPVRILVKKAELTLEGIKQFYIAVEKEEWKL---- 252 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 253 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 277 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD + +R ++ F+ G R LI TD+ ARGI Sbjct 278 DWLTDKLT---------ARDFTVSAMHGDMEQQQRDVIMKEFRSGSSRVLIATDLLARGI 328 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + +G Sbjct 329 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDNGRTRKAKRKKG 384 Score = 90.6 bits (223), Expect = 4e-18, Method: Composition-based stats. Identities = 25/77 (32%), Positives = 39/77 (51%), Gaps = 0/77 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + E+ + V + P+ IQ +I ++ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLKDQQEGKKGKT 79 V LK Q T Sbjct 86 KVDTNLKACQALILAPT 102 >sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana OX=3702 GN=RH8 PE=2 SV=1 Length=505 Score = 297 bits (760), Expect = 4e-91, Method: Composition-based stats. Identities = 97/382 (25%), Positives = 162/382 (42%), Gaps = 61/382 (16%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L++A +G K+ + + N +A+I+ P+RELA QT K+ K++ Sbjct 168 GRDILARAKNG-TGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHL 226 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 K++ ++ GG + +D + L V ++VGTPGR+ DL G L LV+DEAD Sbjct 227 ---KIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEAD 283 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LLSQ + + + + +P + Q+++ SAT VK ++ + P ++L Sbjct 284 KLLSQEFQPSVEHLISFLP------ESRQILMFSATFP-VTVKDFKDRFLTNPYVINLMD 336 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E ++ + V + K Sbjct 337 ELTLK-GITQFYAFVEERQ----------------------------------------K 355 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + +++Q+IIFC + + L + + G +SC +H Sbjct 356 IHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELG---------YSCFYIHAKMLQDH 406 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F+ G R L+CTD+ RGIDI V VIN P + Y+HR+GR GR +G Sbjct 407 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLG 466 Query 614 LAISLVATEKEKVWYHVCSSRG 635 LA++L+ E Y + G Sbjct 467 LAVNLITYEDRFNLYRIEQELG 488 Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IPV++ Sbjct 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + + Q + + Sbjct 193 IDQDNNVIQ---------AVIIVPTRELALQ 214 >sp|Q6FS54|DBP3_CANGA ATP-dependent RNA helicase DBP3 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP3 PE=3 SV=1 Length=540 Score = 298 bits (763), Expect = 4e-91, Method: Composition-based stats. Identities = 105/419 (25%), Positives = 177/419 (42%), Gaps = 67/419 (16%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 + +++ G + + P K L++ P+RELA Q +N+ + Sbjct 169 IGVAETGSGKTFAFGVPAINNLLTSSSKPKGIKVLVISPTRELASQIYDNLVLLTQ---K 225 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGL 375 + ++ GGV DQ + ++VV TPGRL DL+ G ++LS V ++VLDEAD + Sbjct 226 VGIDCCVVYGGVPKDDQRRQIAKS-NVVVATPGRLLDLIEEGSVDLSPVDYMVLDEADRM 284 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L +G+ + I R+ Q + K Q ++ +AT +V++L+ M P V + D Sbjct 285 LEKGFEEDIKRIIGQ-----TKSKDRQTLMFTATWPK-EVRELASTFMKEPVKVSIGNRD 338 Query 436 --SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 S + +V V+P++ + L Sbjct 339 ELSANKRITQIVEVVDPRSKE-----------------------------------RKLL 363 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 K D+ +IF K + +E+ G + +HGD + Sbjct 364 DLLKKYQSGPKKNDKVLIFALYKKEASRVERNLNYNG---------YKVAAIHGDLSQQQ 414 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R Q L FK G L+ TDVAARG+DI V VIN+T P ++YVHRIGR GRA + G Sbjct 415 RTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTG 474 Query 614 LAISLVATEKEKVWYHVCSSRG-----------KGCYNTRLKEDGGCTIWYNEMQLLSE 661 A +L +++ + + + K +T+ KE G ++ ++ + + Sbjct 475 TAHTLFTEQEKHLAGGLVNVLNGANQPVPEDLIKFGTHTKRKEHGAYGAFFKDIDMSKK 533 Score = 91.7 bits (226), Expect = 5e-18, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 58/139 (42%), Gaps = 18/139 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AF+++ + E+ + + + PT IQA S P +L G DV+ AETGSGKT AF +P Sbjct 129 LLAFNQISLDKEVQNEIAK--FPKPTPIQAVSWPYLLSGKDVIGVAETGSGKTFAFGVPA 186 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 I + + K K S + YD CC Sbjct 187 INNLLTS------SSKPKGIKVLVISPTRELASQIYDNLVLLTQKVGIDCCVVYGGVPKD 240 Query 112 -QSREVKEWHGCRATKGLM 129 Q R++ + + AT G + Sbjct 241 DQRRQIAKSNVVVATPGRL 259 >sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=PRP5 PE=3 SV=2 Length=1207 Score = 312 bits (800), Expect = 4e-91, Method: Composition-based stats. Identities = 119/495 (24%), Positives = 188/495 (38%), Gaps = 107/495 (22%) Query 231 CVLKNAELKF--NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQTKF 282 C L L N G E+ AL D V SG K Sbjct 582 CGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIKD 641 Query 283 LP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 P + P LI+ P+RELA Q + K F K + LR + GG R+Q++ L+ Sbjct 642 QPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMG---LRAVCAYGGAPIREQIAELK 698 Query 338 NGVDIVVGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 G +I+V TPGR+ DL+ NL +V ++VLDEAD + G+ + ++ + Sbjct 699 RGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANM--- 755 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV--PVNPKT 452 Q I+ SAT+ + L++K++ P V + G V + +V K Sbjct 756 ---RPDRQTILFSATMPRI-IDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKF 811 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 R+ E LG+ + R +D + +IF Sbjct 812 HRVLELLGELYDRDEDA--------------------------------------RTLIF 833 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 + D+L + + +G + C+ +HG + +R + FKKG V LI T Sbjct 834 VERQEKADDLLKELMMKG---------YPCMSIHGGKDQIDRDSTISDFKKGVVPILIAT 884 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 VAARG+D+ + VIN P+ ++YVHR GR GRA G+A++ V E+E + Sbjct 885 SVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAPGIAK 944 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQ 692 + L + + + KV G+ Sbjct 945 A--------------------------------LEQSGQPIPDRLNEMRKAHREKVKSGK 972 Query 693 KRAAGGGSYKGHVDI 707 + G KG + Sbjct 973 AKDTSGFGGKGLDRL 987 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 127/372 (34%), Gaps = 51/372 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +++ G+ + V+ + + PT IQ +++P ++ G DV+ A+TGSGKT AF +P+ Sbjct 576 VQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPM 635 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 + + KDQ K I + + + + F R V + Sbjct 636 FRHI----KDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMM-----GLRAVCAYG 686 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 G + + + K E+ G + + + + + F+ Sbjct 687 GAPIREQIAELKRGAEIIVCTPGRM-IDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFE 745 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 + + + D+ + FS I + + VLKN ++ Sbjct 746 PQVMKIFAN------MRPDRQTILFSA------TMPRIIDSLTKK------VLKNP-IEV 786 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 G + V + P + H + + + LI +E A+ Sbjct 787 TVGGRSVVAKEIEQIVEVRDEPSKF-----HRVLELLGELYDRDEDARTLIFVERQEKAD 841 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGG---VAARDQLSVLENG-VDIVVGTPGRLDDLVST 356 K + + I GG + +S + G V I++ T V+ Sbjct 842 -------DLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPILIAT------SVAA 888 Query 357 GKLNLSQVRFLV 368 L++ Q++ ++ Sbjct 889 RGLDVKQLKLVI 900 >sp|Q6CT46|DBP3_KLULA ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP3 PE=3 SV=1 Length=504 Score = 297 bits (760), Expect = 4e-91, Method: Composition-based stats. Identities = 106/419 (25%), Positives = 171/419 (41%), Gaps = 67/419 (16%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 + +++ G + + ++ K L++ P+RELA Q +N+ Sbjct 133 IGIAETGSGKTFAFGVPAINNIVTSGDKSSSVKVLVISPTRELASQIYDNLIVLTDACG- 191 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGL 375 LR + GGV Q L +VV TPGRL DL+ G ++LS V +LVLDEAD + Sbjct 192 --LRSCCVYGGVPKDQQREDLRRS-QVVVATPGRLLDLIEEGSVDLSHVNYLVLDEADRM 248 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L +G+ + I ++ Q + Q ++ +AT +V++L+ M P V + D Sbjct 249 LEKGFEEDIKKIIRQ-----TRSTSRQTLMFTATWPK-EVRELASSFMSEPVKVSIGNRD 302 Query 436 --SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 S + +V V+P K L Sbjct 303 ELSANKRITQIVEVVDP-----------------------------------FRKEKKLL 327 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 K D+ +IF K + +E+ G + +HGD + Sbjct 328 ELLKKYHSGPTKNDKVLIFALYKKEASRVERNLKYNG---------YDVAAIHGDLSQQQ 378 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R Q L FK G L+ TDVAARG+DI V VIN+T P ++YVHRIGR GRA + G Sbjct 379 RTQALNEFKAGKCNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQYG 438 Query 614 LAISLVATEKEKVWYHVCSSRG-----------KGCYNTRLKEDGGCTIWYNEMQLLSE 661 A +L +++ + + + K +T+ KE ++ ++ L + Sbjct 439 TAHTLFTEQEKHLAGALVNVLNGAGQPVPEELKKFGTHTKKKEHSAYGAFFKDVDLSKK 497 Score = 87.5 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 18/136 (13%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + +I + + + + PT IQA S P +L G DV+ AETGSGKT AF +P I Sbjct 96 FSQVSFIDQIQKEISK--FPKPTPIQAVSWPYLLAGKDVIGIAETGSGKTFAFGVPAINN 153 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC---------QS 113 + + G K + S + YD CC Q Sbjct 154 IVTS------GDKSSSVKVLVISPTRELASQIYDNLIVLTDACGLRSCCVYGGVPKDQQR 207 Query 114 REVKEWHGCRATKGLM 129 +++ AT G + Sbjct 208 EDLRRSQVVVATPGRL 223 >sp|Q109G2|RH12_ORYSJ DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0503700 PE=2 SV=2 Length=521 Score = 297 bits (761), Expect = 4e-91, Method: Composition-based stats. Identities = 98/382 (26%), Positives = 161/382 (42%), Gaps = 61/382 (16%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L++A +G K+ + + NA + +I+ P+RELA QT K+ KY+ Sbjct 184 GSDILARAKNG-TGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKYL 242 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 + ++ ++ GG + +D + L V ++VGTPGR+ DL G L LV+DEAD Sbjct 243 N---IQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTRKGICVLKDCSMLVMDEAD 299 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LL+ + I ++ + +P Q+++ SAT VK EK + P ++L Sbjct 300 KLLAPEFQPSIEQLIHFLPA------NRQLLMFSATFP-VTVKDFKEKYLPRPYVINLMD 352 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E ++ + V + K Sbjct 353 ELTLK-GITQYYAFVEERQ----------------------------------------K 371 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + +++Q+IIFC + + L + + G +SC +H Sbjct 372 VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELG---------YSCFYIHAKMLQDH 422 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F+ G R L+CTD+ RGIDI V VIN P + Y+HR+GR GR +G Sbjct 423 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTSETYLHRVGRSGRFGHLG 482 Query 614 LAISLVATEKEKVWYHVCSSRG 635 LA++L+ E Y + G Sbjct 483 LAVNLITYEDRFNLYRIEQELG 504 Score = 96.0 bits (237), Expect = 2e-19, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 39/91 (43%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + Q + + Sbjct 209 IDPEKNAIQV---------VILVPTRELALQ 230 >sp|A1CMQ7|SUB2_ASPCL ATP-dependent RNA helicase sub2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=sub2 PE=3 SV=1 Length=441 Score = 295 bits (754), Expect = 4e-91, Method: Composition-based stats. Identities = 99/382 (26%), Positives = 161/382 (42%), Gaps = 63/382 (16%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 L +A G + K+ + Q + +P L++ +RELA Q N +F KY+ Sbjct 97 DVLCQAKSG-LGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL-- 153 Query 316 PKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P ++ + GG + + VL N +IVVGTPGRL+ LV KL+L V+ VLDE Sbjct 154 PDVKTAVFYGGTPIQKDVEVLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDEC 213 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L + R +I + T K QV++ SATL S +++ + +K M P V + Sbjct 214 DKMLD---QIDMRRDVQEIFRATPADK--QVMMFSATL-SQEIRPICKKFMRNPLEVYVD 267 Query 433 GEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + + ++ Sbjct 268 DDTKLTLHGLQQYYIKLSESE--------------------------------------- 288 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + +Q IIF ++ + + L++ + F + +H Sbjct 289 -KNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRE---------CNFPSIAVHSGVSQ 338 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 ER + + FK+ + R + TDV RGIDI + IN LP + +Y+HR+GR GR Sbjct 339 EERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGT 398 Query 612 MGLAISLVATE-KEKVWYHVCS 632 GL+IS V+ E EKV + Sbjct 399 KGLSISFVSNEDDEKVLKEIEK 420 Score = 71.7 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (51%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 58 TGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTL 117 Query 62 QIV 64 + Sbjct 118 HQL 120 >sp|Q53RK8|RH21_ORYSJ DEAD-box ATP-dependent RNA helicase 21 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0708600 PE=2 SV=1 Length=736 Score = 303 bits (777), Expect = 5e-91, Method: Composition-based stats. Identities = 92/441 (21%), Positives = 167/441 (38%), Gaps = 77/441 (17%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 L E+ ++ ++ A + + + +++ G Sbjct 321 KLGTELLRAVEKAGYKEPSPIQMASIPLGL--------QQRDVIGIAETGSGKTAAFVLP 372 Query 273 GNAQVTQTKFLPN-----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + +T+ + P A+++ P+RELA+Q +F Y+ ++ + I+GG Sbjct 373 MLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFATYLG---IKVVSIVGGQ 429 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 + +Q + G ++V+ TPGRL D + L+Q ++VLDEAD ++ G+ + + Sbjct 430 SIEEQGFKIRQGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGV 489 Query 388 HNQIPQVTSDGKR-----------LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 + +P + + SAT+ V++L+ K + P V + Sbjct 490 LDAMPSSNLKPENEDEELDAKTIYRTTYMFSATMPPA-VERLARKYLRNPVVVTIGTAGK 548 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 D + V+ K Sbjct 549 ATDLITQNVIMTKESE----------------------------------------KMSR 568 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 + + + AI+FC TK D + + G F LHG + +R+ Sbjct 569 LQKILTDLGDKPAIVFCNTKKSADARAKDLDKAG---------FRVTTLHGGKSQEQRET 619 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 +L+ F+ L+ TDVA RGIDI V +VIN +P Y HRIGR GRA + GLA Sbjct 620 SLDGFRNRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLAT 679 Query 617 SLVATEKEKVWYHVCSSRGKG 637 S + E +++ + + Sbjct 680 SFLTLENTDIFFDLKQMLIQS 700 Score = 105 bits (261), Expect = 5e-22, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 49/103 (48%), Gaps = 1/103 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M +SE + E+ +AVE+ + P+ IQ SIPL L DV+ AETGSGKT AF +P+ Sbjct 314 MRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPM 373 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + L E + + + + + FA Sbjct 374 LSYITR-LPPISEENEAEGPYAVVMAPTRELAQQIEEETVKFA 415 >sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 PE=1 SV=2 Length=760 Score = 304 bits (778), Expect = 5e-91, Method: Composition-based stats. Identities = 108/438 (25%), Positives = 171/438 (39%), Gaps = 68/438 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K +D G + +I +K QA ++ L + ++K G Sbjct 228 KTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLS--------GRDVIGIAKTGSGKT 279 Query 267 VKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + L P +I P+RELA Q K+F K LR + Sbjct 280 AAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSK---AYGLRVSAVY 336 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG++ +Q L+ G +IVV TPGRL D++ L + + +LVLDEAD + G+ + Sbjct 337 GGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQV 396 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + QI Q ++ SAT+ + V+KL+ +I+ P V + + + V Sbjct 397 RSIVGQI------RPDRQTLLFSATMP-WKVEKLAREILSDPIRVTVGEVGMANEDITQV 449 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + ++L L K D+ Sbjct 450 VNVIPSDAEKLPWLLEKLPGMIDEGD---------------------------------- 475 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 ++F K D +E + F LHGD+ R + L++FK G Sbjct 476 ----VLVFASKKATVDEIEAQLTL---------NSFKVAALHGDKDQASRMETLQKFKSG 522 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE-RMGLAISLVATEK 623 LI TDVAARG+DI + V+N + + +VHRIGR GRA R G+A +LV + Sbjct 523 VHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQRE 582 Query 624 EKVWYHVCSSRGKGCYNT 641 + + +S N Sbjct 583 ARFAGELVNSLVAAGQNV 600 Score = 115 bits (287), Expect = 4e-25, Method: Composition-based stats. Identities = 29/105 (28%), Positives = 53/105 (50%), Gaps = 4/105 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F + G +I A+++ + PT IQ +++P++L G DV+ A+TGSGKT AF +P+ Sbjct 227 VKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPM 286 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I + DQ E ++ + I + + + F+ Sbjct 287 IVHIM----DQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKA 327 >sp|Q2U6P7|SUB2_ASPOR ATP-dependent RNA helicase sub2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=sub2 PE=3 SV=1 Length=441 Score = 294 bits (753), Expect = 6e-91, Method: Composition-based stats. Identities = 99/382 (26%), Positives = 161/382 (42%), Gaps = 63/382 (16%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 L +A G + K+ + Q + +P L++ +RELA Q N +F KY+ Sbjct 97 DVLCQAKSG-LGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL-- 153 Query 316 PKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P ++ + GG + + VL N +IVVGTPGRL+ LV KL+L V+ VLDE Sbjct 154 PDVKTAVFYGGTPIQKDVEVLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDEC 213 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L + R +I + T K QV++ SATL S +++ + +K M P V + Sbjct 214 DKMLD---QIDMRRDVQEIFRATPADK--QVMMFSATL-SQEIRPVCKKFMRNPLEVYVD 267 Query 433 GEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + + ++ Sbjct 268 DDTKLTLHGLQQYYIKLSEAE--------------------------------------- 288 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + +Q IIF ++ + + L++ + F + +H Sbjct 289 -KNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRE---------CNFPSIAVHSGVSQ 338 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 ER + + FK+ + R + TDV RGIDI + IN LP + +Y+HR+GR GR Sbjct 339 EERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGT 398 Query 612 MGLAISLVA-TEKEKVWYHVCS 632 GL+IS V+ E EKV + Sbjct 399 KGLSISFVSNEEDEKVLKDIEK 420 Score = 71.7 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (51%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 58 TGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTL 117 Query 62 QIV 64 + Sbjct 118 HQL 120 >sp|A4STJ7|RHLB_AERS4 ATP-dependent RNA helicase RhlB OS=Aeromonas salmonicida (strain A449) OX=382245 GN=rhlB PE=3 SV=1 Length=429 Score = 294 bits (752), Expect = 6e-91, Method: Composition-based stats. Identities = 115/494 (23%), Positives = 194/494 (39%), Gaps = 80/494 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 ++ +GL E+ ++++ ++ L ++ G Sbjct 8 TEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPL--------LVEGHDLAGQAQTGTGK 59 Query 266 IVKSQHSG-NAQVTQTKFLP---NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 + + N +T P N P+A+I+ P+RELA Q N+ + L+ Sbjct 60 TIAFLAATFNYLLTHPLSNPRLVNQPRAIIMAPTRELAVQIYNDADTISA---STGLKLG 116 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 L GG QL+VLE GVDI++GT GR+ D + ++LS ++ +VLDEAD + G+ Sbjct 117 LAYGGEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFI 176 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I + ++P T ++ SATL S V++L+ + M+ P V ++ E + Sbjct 177 KDIRFLFRRMPAPT----ERLSMLFSATL-SLRVQELAYEHMNHPEHVQIEPEQMTGIRI 231 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 E K + + Sbjct 232 Q----------------------------------------EELFYPSNEDKMLLLLSLM 251 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 +E ++AI+F TK C+++ + G L GD +R + LE F Sbjct 252 EEEWPEKAIVFANTKHVCEDVHAWLENDG---------HRVGLLTGDVPQKKRMKILEDF 302 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 KG + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G +ISL Sbjct 303 TKGTLDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLACE 362 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 + + Y+ LL ++ + +P + Sbjct 363 DYAFNLPAIEE----------YIHHPIPVSKYDREALLDDVTAP-KRVVRNRQPVNRNMR 411 Query 682 DEFDGKVTYGQKRA 695 D G + ++R Sbjct 412 DRQGGGNSNNRRRP 425 Score = 98.3 bits (243), Expect = 2e-20, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 112/352 (32%), Gaps = 58/352 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F++MG+ PE+ +E + T IQA S+PL++ G D+ A+TG+GKT AF Sbjct 11 FAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKTIAFLAATFNY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + I + + + Y+ + Sbjct 71 LLTHPLSNPRLVNQPRAI--IMAPTRELAVQIYN--------------------DADTIS 108 Query 124 ATKGLMKGKHYYEVSCHDQGL-CRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNY 182 A+ GL G Y +G ++ + +GT + K + Sbjct 109 ASTGLKLGLAY-----GGEGYDKQLAVLEQGVDILIGTTGRIIDY--FKSKVIDLSNIQ- 160 Query 183 GEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAEL 238 + +D+ F KD+ F P + L+ EL Sbjct 161 ------------VVVLDEADRMFDLGFIKDIRFLFRRMPAPTERLSMLFSATLSLRVQEL 208 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 + + + + + S + KA++ ++ Sbjct 209 AYEHMNHPEHVQIEPEQMTGIRIQEELFYPSNEDKMLLLLSLMEEEWPEKAIVFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + +++N R L+ G V + ++ +LE+ +DI+V T Sbjct 267 -----HVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILEDFTKGTLDILVAT 313 >sp|B7VME9|RHLB_VIBA3 ATP-dependent RNA helicase RhlB OS=Vibrio atlanticus (strain LGP32) OX=575788 GN=rhlB PE=3 SV=1 Length=436 Score = 294 bits (752), Expect = 6e-91, Method: Composition-based stats. Identities = 108/410 (26%), Positives = 172/410 (42%), Gaps = 63/410 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + + +T PN P+A+I+ P+RELA Q N+ Sbjct 51 GQAQTGTGKTLAFLTATFNHLLKTPEHEGRKPNQPRAIIMAPTRELAIQIYNDADSL--- 107 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + + ++ L GG + QL +E G DI++GT GR+ D NL+ ++ +VLDEA Sbjct 108 VASTGIKAALAYGGESYDKQLGKIEEGADILIGTTGRIIDFYKQKVFNLNHIQAVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P+ K ++ SATL S+ V++L+ + MH P V ++ Sbjct 168 DRMFDLGFIKDIRFLFRRMPE----PKDRLNMLFSATL-SYRVQELAFEHMHNPEHVVVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E + + P N L + L Sbjct 223 PERKTGHRIQEELFYPSNEHKMALLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+AIIF TK C+++ + G L GD Sbjct 251 ---------IEEEWPDRAIIFANTKHKCESVWGHLAADG---------HRVGLLTGDVPQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R++ LE+F KGDV L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKREKILEQFTKGDVDLLVATDVAARGLHIPQVTHVFNFDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 G +IS + + + M+L + Sbjct 353 SGHSISFACEDYAINLPPIEEYIEHAIPMSDYDASALLEDLPAPMRLRTR 402 Score = 104 bits (258), Expect = 2e-22, Method: Composition-based stats. Identities = 58/351 (17%), Positives = 119/351 (34%), Gaps = 56/351 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ ++P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLDLLPQVIEGLEKKGFDYCTPIQALALPVLLTGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + +T + EG+K + + + Y+ + Sbjct 71 LLKTP--EHEGRKPNQPRAIIMAPTRELAIQIYNDADSL--------------------V 108 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A+ G+ Y + ++G A + +GT + D Y Sbjct 109 ASTGIKAALAY----GGESYDKQLGKIEEGADILIGTTG--------------RIIDFYK 150 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAELK 239 ++ + I + +D+ F KD+ F P N + EL Sbjct 151 QKVFNLNHIQAVV-LDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSATLSYRVQELA 209 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELA 299 F + + + S A + +A+I ++ Sbjct 210 FEHMHNPEHVVVEPERKTGHRIQEELFYPSNEHKMALLQTLIEEEWPDRAIIFANTK--- 266 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ R L+ G V + + +LE VD++V T Sbjct 267 ----HKCESVWGHLAADGHRVGLLTGDVPQKKREKILEQFTKGDVDLLVAT 313 >sp|Q7MYL2|RHLB_PHOLL ATP-dependent RNA helicase RhlB OS=Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01) OX=243265 GN=rhlB PE=3 SV=1 Length=428 Score = 294 bits (752), Expect = 6e-91, Method: Composition-based stats. Identities = 111/458 (24%), Positives = 182/458 (40%), Gaps = 71/458 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K D L ++ + N+ ++ L F ++ G Sbjct 9 KKFSDFALHPKVIEALDNKGFSNCTPIQALTLPFT--------VEGRDVAGQAQTGTGKT 60 Query 267 VKSQHSGNAQV----TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 + S + + N P+ALI+ P+RELA Q ++ + + L+ L Sbjct 61 LAFLASAFHYLLTHPAAEERQTNQPRALIMAPTRELAVQIYSDAEDLAQ---ATGLKMGL 117 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG QL +LE+GVDI++GT GRL D G +NL+ V+ +VLDEAD + G+ Sbjct 118 AYGGDGYDKQLKILESGVDILIGTTGRLIDYTKQGHINLNAVQVVVLDEADRMYDLGFIK 177 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV- 441 I + ++P V ++ SATL S+ V++L+ + M+ +++++ + Sbjct 178 DIRWLFRRMPPVN----ERMNLLFSATL-SYRVRELAFEQMNHAEYIEVEPLQKTGHRIR 232 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + P N + RL + L + Sbjct 233 EELFYPSNEEKMRLLQTL-----------------------------------------L 251 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 +E D+ IIF TK C+++ + G L GD +R + LE F Sbjct 252 EEEWPDRCIIFANTKHRCEDIWAHLAADG---------HRVGLLTGDVAQKKRLRILEEF 302 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 G++ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +ISL Sbjct 303 SNGNIDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACE 362 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 E + ++ + Sbjct 363 EYALNLPAIEDYIQHSIPVSKYNSQALLKDLPAPKRRY 400 Score = 109 bits (272), Expect = 5e-24, Method: Composition-based stats. Identities = 55/355 (15%), Positives = 116/355 (33%), Gaps = 60/355 (17%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS+ + P++ +A++ + T IQA ++P + G DV A+TG+GKT AF Sbjct 9 KKFSDFALHPKVIEALDNKGFSNCTPIQALTLPFTVEGRDVAGQAQTGTGKTLAFLASAF 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + E ++ + + + Y + ++ + G Sbjct 69 HYLLTHPAA--EERQTNQPRALIMAPTRELAVQIY--------------SDAEDLAQATG 112 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 + + ++ + G+ + +GT + G + N Sbjct 113 LKMGLAYGGDGYDKQLKILESGV----------DILIGTTGRLIDYTKQGHINLNAVQ-- 160 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAF-EIPPHMKNQALFPACVLKNAELK 239 + +D+ + KD+ F +PP + L + L + Sbjct 161 -------------VVVLDEADRMYDLGFIKDIRWLFRRMPPVNERMNLLFSATLSYRVRE 207 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGY---IVKSQHSGNAQVTQTKFLPNAP-KALIVEPS 295 F + L K + + ++ QT P + +I + Sbjct 208 LAFEQM--NHAEYIEVEPLQKTGHRIREELFYPSNEEKMRLLQTLLEEEWPDRCIIFANT 265 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + + ++ R L+ G VA + +L +LE +DI+V T Sbjct 266 K-------HRCEDIWAHLAADGHRVGLLTGDVAQKKRLRILEEFSNGNIDILVAT 313 >sp|A5DS77|DBP2_LODEL ATP-dependent RNA helicase DBP2 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP2 PE=3 SV=1 Length=552 Score = 298 bits (762), Expect = 7e-91, Method: Composition-based stats. Identities = 107/422 (25%), Positives = 176/422 (42%), Gaps = 67/422 (16%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +KNQ ++ V ++ G + G + Sbjct 127 VLNELKNQGFPKPTGIQCQGWPMALS--------GRDMVGIAATGSGKTLSYCLPGIVHI 178 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q + K+ + ++R + GG Q+ Sbjct 179 NAQPLLKRGDGPIVLVLAPTRELACQIQ---TECSKFGASSRIRNTCVYGGAPKGPQIRD 235 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L NGV+I + TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 236 LANGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI---- 291 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +V+ L+ + P V + E + T+ +V V R Sbjct 292 --RPDRQTLMWSATWPK-EVQNLARDYLDNPIQVTIGSLELAASHTITQIVQVVTEYQKR 348 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L H+ + + + ++F Sbjct 349 ---DLLVKHLESALADSN----------------------------------SKVLVFAS 371 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK CD + Y G + + +HGD++ HER L+ F++G ++ TDV Sbjct 372 TKRTCDEVTSYLRADG---------WPALAIHGDKEQHERDWVLKEFRQGSHSIMVATDV 422 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARGID+ G+ +V+N +P ++YVHRIGR GR G AIS ++K+ +C Sbjct 423 AARGIDVKGITHVVNYDMPGNIEDYVHRIGRTGRGGATGTAISFFTDNEKKLGGDLCKIM 482 Query 635 GK 636 + Sbjct 483 RE 484 Score = 100 bits (248), Expect = 1e-20, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G + ++ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 115 ITSFDEAGFPDYVLNELKNQGFPKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPG 174 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q K+G I + + S F S Sbjct 175 IVHI----NAQPLLKRGDGPIVLVLAPTRELACQIQTECSKFGASS 216 >sp|A5DB98|IF4A_PICGU ATP-dependent RNA helicase eIF4A OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=TIF1 PE=3 SV=1 Length=396 Score = 292 bits (748), Expect = 8e-91, Method: Composition-based stats. Identities = 116/462 (25%), Positives = 190/462 (41%), Gaps = 78/462 (17%) Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFG 243 +EF D + D F DL L I + ++ + Sbjct 3 QEFNEIDANTIETNYDNVVYSFD----DLNLKPNIVRGIFGYGYESPSAIQQRAI----- 53 Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL 303 P +G L++A G K+ + + + A +ALI+ P+RELA Q Sbjct 54 -----LPITEGRDVLAQAQSG-TGKTATFTISALQRIDENLKATQALILAPTRELALQIQ 107 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 N I Y++ + IGG + +D + ++GV IVVGTPGR+ D++ + Sbjct 108 NVITHIGLYLN---VTVHASIGGTSMKDDIEAFKSGVQIVVGTPGRVFDMIERRFFRTDK 164 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 V+ ++DEAD +LS G+ + I + +P+ T QV++ SAT+ DV +++ K M Sbjct 165 VKMFIMDEADEMLSSGFKEQIYNIFRLLPETT------QVVLLSATMP-QDVLEVTTKFM 217 Query 424 HFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 + P + +K ++ + + + V + Sbjct 218 NNPVRILVKKDELTLEGIKQFYINVEQED------------------------------- 246 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 K + + QA+IFC T+ + L K F+ Sbjct 247 --------FKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKL---------KAENFTVS 289 Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +H D +R + F+ G R LI TD+ ARGID+ V VIN LP K+NY+HRI Sbjct 290 AIHADLPQSDRDTIMNEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPANKENYIHRI 349 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 GR GR R G+AI+ V E + + Y+T+++E Sbjct 350 GRGGRFGRKGVAINFVTDEDVGMMREIEK-----FYSTQIEE 386 Score = 96.7 bits (239), Expect = 5e-20, Method: Composition-based stats. Identities = 24/102 (24%), Positives = 45/102 (44%), Gaps = 9/102 (9%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 23 SFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQ 82 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + E LK Q + + + + + + Sbjct 83 RIDENLKATQ---------ALILAPTRELALQIQNVITHIGL 115 >sp|A2R0B5|SUB2_ASPNC ATP-dependent RNA helicase sub2 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=sub2 PE=3 SV=1 Length=440 Score = 294 bits (752), Expect = 8e-91, Method: Composition-based stats. Identities = 105/416 (25%), Positives = 173/416 (42%), Gaps = 74/416 (18%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFV----------ALSKAPDGYIVKSQHSGNAQVTQTK 281 +LK L+ + F+ P + V L +A G + K+ + Q + Sbjct 63 LLKEELLR-AITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSG-LGKTAVFVLTTLHQLE 120 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-- 339 +P L++ +RELA Q N +F KY+ P ++ + GG + + +L N Sbjct 121 PVPGECSILVMCHTRELAYQIKNEYARFSKYL--PDVKTAVFYGGTPIQKDVELLSNKES 178 Query 340 -VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 +IVVGTPGRL+ LV KL+L V+ VLDE D +L + R +I + T Sbjct 179 YPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLD---QIDMRRDVQEIFRATPAD 235 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWE 457 K QV++ SATL S +++ + +K M P V + + + + ++ Sbjct 236 K--QVMMFSATL-SQEIRPVCKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAE----- 287 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K + + +Q IIF ++ + Sbjct 288 -----------------------------------KNRKLNELLDSLEFNQVIIFVKSTL 312 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + L++ + F + +H ER + + FK+ + R + TDV R Sbjct 313 RANELDKLLRE---------CNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGR 363 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE-KEKVWYHVCS 632 GIDI + IN LP + +Y+HR+GR GR GL+IS V+TE EKV + Sbjct 364 GIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTEDDEKVLKDIEK 419 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (51%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 57 TGFRDFLLKEELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTL 116 Query 62 QIV 64 + Sbjct 117 HQL 119 >sp|Q9LUW5|RH53_ARATH DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH53 PE=1 SV=1 Length=616 Score = 299 bits (766), Expect = 8e-91, Method: Composition-based stats. Identities = 107/433 (25%), Positives = 185/433 (43%), Gaps = 70/433 (16%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 LG++ EI + ++ + ++ A L+ + ++ G + Sbjct 109 LGISPEIVKALSSKGIEKLFPIQKAVLE--------PAMEGRDMIGRARTGTGKTLAFGI 160 Query 272 SGNAQVTQTKFLPNA---PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ + P L++ P+RELA Q ++ P L + + GG Sbjct 161 PIIDKIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRE-----SAPSLDTICLYGGTP 215 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ L+ GVD+ VGTPGR+ DL+ G LNLS+V+F+VLDEAD +L G+++ + + Sbjct 216 IGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIIL 275 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 ++P ++ Q ++ SAT+ S+ ++ L++K ++ P VDL G+ Sbjct 276 EKLP------EKRQSMMFSATMPSW-IRSLTKKYLNNPLTVDLVGDS------------- 315 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 +L + + I D P + K + Sbjct 316 ---DQKLADGITTYSIIADSYGRASIIGPLVT---------------------EHAKGGK 351 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 I+F +TK D D L F C LHGD +R++ L F+ G Sbjct 352 CIVFTQTKRDADRLSYAL----------ARSFKCEALHGDISQSQRERTLAGFRDGHFNI 401 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+D+ V +I+ LP+ + +VHR GR GRA + G AI + + ++ + Sbjct 402 LVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVK 461 Query 629 HVCSSRGKGCYNT 641 + G Sbjct 462 IIEREVGSRFTEL 474 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 30/139 (22%), Positives = 53/139 (38%), Gaps = 10/139 (7%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 SE+G+ PEI +A+ IQ + + G D++ A TG+GKT AF IP+I + Sbjct 107 SELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 166 Query 65 YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRA 124 +K + +G+ + + + A D +C + Sbjct 167 ---IKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRQL 223 Query 125 TKGLMKGKHYYEVSCHDQG 143 G+ +V+ G Sbjct 224 DYGV-------DVAVGTPG 235 >sp|Q7Y183|RH10_ORYSJ DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=RH10 PE=2 SV=1 Length=472 Score = 295 bits (755), Expect = 9e-91, Method: Composition-based stats. Identities = 110/457 (24%), Positives = 168/457 (37%), Gaps = 70/457 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 +LG+ E+ ++ + + L + G Sbjct 41 STFAELGVVPELVAACDAMGWKEPTRIQAEAIPHAL--------EGRDLIGLGQTGSGKT 92 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 Q + P A A ++ P+RELA Q + I L +++GG Sbjct 93 GAFALPII-QALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIG---LSCTVLVGG 148 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 V Q L IVVGTPGRL D + T +L+++++LVLDEAD LL+ + ++ Sbjct 149 VDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALD 208 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + N IP K + + SAT+ + V KL + P V++ + S DT+ Sbjct 209 DILNVIP------KERRTFLFSATMTN-KVSKLQRACLRNPVKVEVASKYSTVDTLRQEF 261 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V K + V + E Sbjct 262 YFVPAD----------------------------------------YKDCFLVHVLNELP 281 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IF RT L +F + + G +R L RFK D Sbjct 282 GSMIMIFVRTCESTRLLALTLRNL---------RFKAISISGQMSQDKRLGALNRFKTKD 332 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 LICTDVA+RG+DI GV VIN +P ++YVHR+GR RA G A+SLV + E Sbjct 333 CNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLV-NQYEA 391 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 +W+ + R ++ I + I Sbjct 392 MWFKMIEKLLGYEIPDRKVDNAEIMILRERISDSKRI 428 Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 56/110 (51%), Gaps = 8/110 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+E+GV+PE+ A + M W PT IQAE+IP L G D++ +TGSGKTGAF++P+I Sbjct 41 STFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPII 100 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + + K Q S + + A GL C Sbjct 101 QALLKQDKPQ-------ALFACVLSPTRELAFQIGQQFEALGSAI-GLSC 142 >sp|A2XKG2|RH10_ORYSI DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. indica OX=39946 GN=RH10 PE=1 SV=1 Length=472 Score = 295 bits (755), Expect = 9e-91, Method: Composition-based stats. Identities = 110/457 (24%), Positives = 168/457 (37%), Gaps = 70/457 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 +LG+ E+ ++ + + L + G Sbjct 41 STFAELGVVPELVAACDAMGWKEPTRIQAEAIPHAL--------EGRDLIGLGQTGSGKT 92 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 Q + P A A ++ P+RELA Q + I L +++GG Sbjct 93 GAFALPII-QALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIG---LSCTVLVGG 148 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 V Q L IVVGTPGRL D + T +L+++++LVLDEAD LL+ + ++ Sbjct 149 VDRVQQAVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALD 208 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + N IP K + + SAT+ + V KL + P V++ + S DT+ Sbjct 209 DILNVIP------KERRTFLFSATMTN-KVSKLQRACLRNPVKVEVASKYSTVDTLRQEF 261 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V K + V + E Sbjct 262 YFVPAD----------------------------------------YKDCFLVHVLNELP 281 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IF RT L +F + + G +R L RFK D Sbjct 282 GSMIMIFVRTCESTRLLALTLRNL---------RFKAISISGQMSQDKRLGALNRFKTKD 332 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 LICTDVA+RG+DI GV VIN +P ++YVHR+GR RA G A+SLV + E Sbjct 333 CNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLV-NQYEA 391 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 +W+ + R ++ I + I Sbjct 392 MWFKMIEKLLGYEIPDRKVDNAEIMILRERISDSKRI 428 Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 56/110 (51%), Gaps = 8/110 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+E+GV+PE+ A + M W PT IQAE+IP L G D++ +TGSGKTGAF++P+I Sbjct 41 STFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPII 100 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 Q + + K Q S + + A GL C Sbjct 101 QALLKQDKPQ-------ALFACVLSPTRELAFQIGQQFEALGSAI-GLSC 142 >sp|Q7MGP7|RHLB_VIBVY ATP-dependent RNA helicase RhlB OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=rhlB PE=3 SV=1 Length=435 Score = 293 bits (751), Expect = 9e-91, Method: Composition-based stats. Identities = 112/493 (23%), Positives = 192/493 (39%), Gaps = 81/493 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DLGL ++ ++ + ++ L ++ ++ G + Sbjct 11 FADLGLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQD--------IAGQAQTGTGKTLA 62 Query 269 SQHSG----NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + P P+A+I+ P+RELA Q N+ + I + ++ L Sbjct 63 FLTATFNHLLTTHAHEGRQPTQPRAIIMAPTRELAIQIYNDAEPL---IASTGIKAALAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + QL+ L+ GVD+++GT GR+ D NL+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDKQLAKLQGGVDVLIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P + ++ SATL S+ V++L+ + MH P V ++ E + Sbjct 180 RFLFRRMPA----PQERLNMLFSATL-SYRVQELAFEHMHNPEHVVVEPEQKTGHRIQEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N L + L I+E Sbjct 235 LFYPSNEDKMALLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AIIF TK C+++ + G L GD +R++ LE+F + Sbjct 254 EWPDRAIIFANTKYKCESIWAHLAADG---------HRVGLLTGDVPQKKREKILEQFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G V L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +IS + Sbjct 305 GSVDLLVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEDY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + E Y+ L+ ++ + ++ + Sbjct 365 AINLPAIEE----------YIEHTIPVSDYDSSALIQDLPAPVRTPSARNQQRRTNTGGA 414 Query 684 FDGKVTYGQKRAA 696 G +R Sbjct 415 RSGDRKSNNRRPR 427 Score = 105 bits (261), Expect = 1e-22, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 116/352 (33%), Gaps = 58/352 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG++ + + + Y+ + + G + Sbjct 71 LLTT--HAHEGRQPTQPRAIIMAPTRELAIQIYN--------------DAEPLIASTGIK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A G+ Y + QG + +GT + D Y Sbjct 115 AALA-YGGESYDKQLAKLQG---------GVDVLIGTTG--------------RIIDFYK 150 Query 184 EE-FTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAEL 238 + F +++ LD + F KD+ F P N + EL Sbjct 151 QRVFNLNNIQAVVLD--EADRMFDLGFIKDIRFLFRRMPAPQERLNMLFSATLSYRVQEL 208 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 F + + + S A + +A+I ++ Sbjct 209 AFEHMHNPEHVVVEPEQKTGHRIQEELFYPSNEDKMALLQTLIEEEWPDRAIIFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ R L+ G V + + +LE VD++V T Sbjct 267 -----YKCESIWAHLAADGHRVGLLTGDVPQKKREKILEQFTQGSVDLLVAT 313 >sp|Q7SEL0|PRP28_NEUCR Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=prp-28 PE=3 SV=1 Length=728 Score = 302 bits (774), Expect = 9e-91, Method: Composition-based stats. Identities = 105/478 (22%), Positives = 181/478 (38%), Gaps = 89/478 (19%) Query 217 EIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ 276 + +KN ++ A + + ++ G Sbjct 303 RLLDIVKNVGYDEPTPIQRAAIPIAL--------QARDLIGVAVTGSGKTAAFLLPLLVY 354 Query 277 VTQTKFL-----PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 +++ L + P ALI+ P+REL +Q + K+F + + I+GG + + Sbjct 355 ISELPPLTEYNKNDGPYALILAPTRELVQQIESEAKKFATPLG---FTVVSIVGGHSLEE 411 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 Q L NG +I+V TPGRL D + L SQ + ++DEAD ++ QG+ + + ++ + + Sbjct 412 QAFALRNGAEIIVATPGRLVDCLERRLLVFSQCCYTIMDEADRMIDQGFEEPLTKILDAM 471 Query 392 PQVTSDG-------------------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 P + Q ++ +AT+ V+++++K + P V + Sbjct 472 PVTNEKPDTDDAENPQLMSRYVDGKDRYRQTMMYTATMPPI-VERIAKKYLRRPAIVTIG 530 Query 433 GEDSVPDTVHHVVVPV---NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 DTV V V + + RL E L + Sbjct 531 NAGEAVDTVEQRVEFVSGEDKRKKRLQEILNSGQFKPP---------------------- 568 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 I+F K +CD + + D KG +S V LHG + Sbjct 569 -------------------IIVFVNIKRNCDMVAR---------DIKGMGYSAVTLHGSK 600 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 +R+ L + G L+ TD+A RGID+ V V+N + ++Y HRIGR GRA Sbjct 601 TQEQREAALASLRNGQTDILVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRA 660 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 + G+AI+ + E V Y + K + E N+ Q + E N Sbjct 661 GKSGVAITFLGPEDNDVLYDLRQIISKSSISKVPDELRRHEAAQNKPQKGQKKLEESN 718 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (43%), Gaps = 1/103 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E + + V+ + + PT IQ +IP+ L D++ A TGSGKT AF +P+ Sbjct 292 MRSWEESTLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPL 351 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + E L E K + + FA Sbjct 352 LVYISE-LPPLTEYNKNDGPYALILAPTRELVQQIESEAKKFA 393 >sp|P39517|DHH1_YEAST ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DHH1 PE=1 SV=1 Length=506 Score = 296 bits (757), Expect = 9e-91, Method: Composition-based stats. Identities = 108/447 (24%), Positives = 173/447 (39%), Gaps = 71/447 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D L E+ + ++ + G L++A +G K Sbjct 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIT----------GRDILARAKNG-TGK 96 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + K N +ALI+ P+RELA QT ++ K+ + ++ GG Sbjct 97 TAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTN 153 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L V I+VGTPGR+ DL S +LS ++DEAD +LS+ + I ++ Sbjct 154 LRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQIL 213 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + +P Q ++ SAT VK+ K +H P ++L E+ + V Sbjct 214 SFLP------PTHQSLLFSATFP-LTVKEFMVKHLHKPYEINLM-EELTLKGITQYYAFV 265 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + +++Q Sbjct 266 EERQ----------------------------------------KLHCLNTLFSKLQINQ 285 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AIIFC + + L + G +SC H K ER + F++G VR Sbjct 286 AIIFCNSTNRVELLAKKITDLG---------YSCYYSHARMKQQERNKVFHEFRQGKVRT 336 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ Y Sbjct 337 LVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLY 396 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNE 655 + G D + N+ Sbjct 397 KIEQELGTEIAAIPATIDKSLYVAEND 423 Score = 99.0 bits (245), Expect = 2e-20, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 9/92 (10%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ + G D+L A+ G+GKT AF IP ++ Sbjct 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 V L Q + + Sbjct 107 KVKPKLNKIQ---------ALIMVPTRELALQ 129 >sp|A6ZXG9|DHH1_YEAS7 ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DHH1 PE=3 SV=1 Length=506 Score = 296 bits (757), Expect = 9e-91, Method: Composition-based stats. Identities = 108/447 (24%), Positives = 173/447 (39%), Gaps = 71/447 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D L E+ + ++ + G L++A +G K Sbjct 48 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIT----------GRDILARAKNG-TGK 96 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + K N +ALI+ P+RELA QT ++ K+ + ++ GG Sbjct 97 TAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTN 153 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L V I+VGTPGR+ DL S +LS ++DEAD +LS+ + I ++ Sbjct 154 LRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQIL 213 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + +P Q ++ SAT VK+ K +H P ++L E+ + V Sbjct 214 SFLP------PTHQSLLFSATFP-LTVKEFMVKHLHKPYEINLM-EELTLKGITQYYAFV 265 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + +++Q Sbjct 266 EERQ----------------------------------------KLHCLNTLFSKLQINQ 285 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AIIFC + + L + G +SC H K ER + F++G VR Sbjct 286 AIIFCNSTNRVELLAKKITDLG---------YSCYYSHARMKQQERNKVFHEFRQGKVRT 336 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ Y Sbjct 337 LVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLY 396 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNE 655 + G D + N+ Sbjct 397 KIEQELGTEIAAIPATIDKSLYVAEND 423 Score = 99.0 bits (245), Expect = 2e-20, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 9/92 (10%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ E+IP+ + G D+L A+ G+GKT AF IP ++ Sbjct 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 V L Q + + Sbjct 107 KVKPKLNKIQ---------ALIMVPTRELALQ 129 >sp|A7TGU7|DHH1_VANPO ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DHH1 PE=3 SV=1 Length=484 Score = 295 bits (755), Expect = 1e-90, Method: Composition-based stats. Identities = 107/427 (25%), Positives = 170/427 (40%), Gaps = 71/427 (17%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D L E+ + ++ + G L++A +G K Sbjct 36 FEDFYLKRELLMGIFEAGFEKPSPIQEESIPVAL----------AGRDILARAKNG-TGK 84 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + K N +ALI+ P+RELA QT ++ K+ + ++ GG Sbjct 85 TAAFVIPTLEKVKSKHNKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGGTN 141 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L V I+VGTPGR+ DL S +LS+ ++DEAD +LS+ + I ++ Sbjct 142 LRDDILRLNETVHILVGTPGRVLDLASRKVADLSECNLFIMDEADKMLSRDFKSIIEQIL 201 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P K Q ++ SAT VK+ +H P ++L E ++ + V Sbjct 202 VFLP------KNHQSLLFSATFP-LSVKEFMVNHLHKPYEINLMDELTLK-GITQYYAFV 253 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K K + +++Q Sbjct 254 EEKQ----------------------------------------KLHCLNTLFSKLQINQ 273 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AIIFC + + L + G +SC H K ER + F++G VR Sbjct 274 AIIFCNSTNRVELLAKKITDLG---------YSCYYSHARMKQQERNRVFHEFRQGKVRT 324 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ Y Sbjct 325 LVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLY 384 Query 629 HVCSSRG 635 + G Sbjct 385 KIEQELG 391 Score = 99.4 bits (246), Expect = 1e-20, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 9/92 (10%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 35 TFEDFYLKRELLMGIFEAGFEKPSPIQEESIPVALAGRDILARAKNGTGKTAAFVIPTLE 94 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 V Q + + Sbjct 95 KVKSKHNKIQ---------ALIMVPTRELALQ 117 >sp|Q4HW67|DHH1_GIBZE ATP-dependent RNA helicase DHH1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DHH1 PE=3 SV=1 Length=486 Score = 295 bits (755), Expect = 1e-90, Method: Composition-based stats. Identities = 113/444 (25%), Positives = 178/444 (40%), Gaps = 68/444 (15%) Query 213 GLAFE--IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 GL FE +F A K + + +EE G L++A +G K+ Sbjct 41 GLEFENFALKRDLLMGIFEAGFEKPSPI-----QEESIPVALTGRDILARAKNG-TGKTA 94 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + + + LI+ P+RELA QT K K++ + ++ GG R Sbjct 95 AFVIPTLERINPKISKIQCLILVPTRELAMQTSQVCKTLGKHLG---INVMVTTGGTGLR 151 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L++ V IVVGTPGR+ DL +LS+ ++DEAD LLS ++ I ++ Sbjct 152 DDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQF 211 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 P K QV++ SAT VK S+K M P ++L ++ + V Sbjct 212 HP------KDRQVMLFSATFP-LSVKDFSDKNMVSPYEINLM-DELTLRGITQYYAFVEE 263 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K K + +++Q+I Sbjct 264 KQ----------------------------------------KVHCLNTLFSKLQINQSI 283 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC H + H R + F+ G R L+ Sbjct 284 IFCNSTNRVELLAKKITELG---------YSCFYSHAKMQQHARNRVFHDFRNGVCRNLV 334 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Y++ Sbjct 335 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNI 394 Query 631 CSSRGKGCYNTRLKEDGGCTIWYN 654 G D ++ N Sbjct 395 ERDLGTEIQPIPASIDKSLYVYEN 418 Score = 98.7 bits (244), Expect = 2e-20, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 39/91 (43%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + ++ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 44 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLER 103 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + + Q + M Sbjct 104 INPKISKIQ---------CLILVPTRELAMQ 125 >sp|P32892|DRS1_YEAST ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DRS1 PE=1 SV=2 Length=752 Score = 303 bits (775), Expect = 1e-90, Method: Composition-based stats. Identities = 104/539 (19%), Positives = 204/539 (38%), Gaps = 70/539 (13%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 D+ + +N L L+ + + + +++A + +A Sbjct 223 DEAKKQMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIAL--------LGKDIIAG 274 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 + G ++ + + +++ P+RELA Q + KQ +++ + Sbjct 275 AVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSG--I 332 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLS 377 L +GG+ R Q +L++ DIV+ TPGR D + ++ N+ V LV+DEAD +L Sbjct 333 TFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLE 392 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 +G+ D +N + +P Q ++ SAT++S +K L + P + + Sbjct 393 EGFQDELNEIMGLLP------SNRQNLLFSATMNS-KIKSLVSLSLKKPVRIMIDPPKKA 445 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + V + + L Sbjct 446 ATKLTQEFVRIRKRDHLKPALLFN-----------------------------------L 470 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 +R + + ++F K L G S LHG +R + Sbjct 471 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG---------MSVGELHGSLTQEQRLDS 521 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 + +FK +V LICTD+A+RG+DI + VIN +P + Y+HR+GR RA R G +++ Sbjct 522 VNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVT 581 Query 618 LV--ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 V +++ + S + T+ K G W +++ +++ E +N TI + Sbjct 582 FVGESSQDRSIVRAAIKSVEENKSLTQGKALGRNVDWV-QIEETNKLVESMNDTIEDILV 640 Query 676 DIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPN 734 + K ++ + + G + H + + + + + LG L Sbjct 641 EEKEE-----KEILRAEMQLRKGENMLKHKKEIQARPRRTWFQSESDKKNSKVLGALSR 694 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+ + + + + + + ++ P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I+ Sbjct 233 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 292 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + K +T + + D G A G+ Sbjct 293 LLYKP------AKIASTRVIVLLPTRELAIQVADVGKQIARFVSGI 332 >sp|Q4WCW2|SUB2_ASPFU ATP-dependent RNA helicase sub2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=sub2 PE=3 SV=1 Length=448 Score = 294 bits (752), Expect = 1e-90, Method: Composition-based stats. Identities = 102/386 (26%), Positives = 163/386 (42%), Gaps = 64/386 (17%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 L +A G + K+ + Q + +P L++ +RELA Q N +F KY+ Sbjct 97 DVLCQAKSG-LGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL-- 153 Query 316 PKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P ++ + GG + + VL N +IVVGTPGRL+ LV KL+L V+ VLDE Sbjct 154 PDVKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDEC 213 Query 373 DGLLSQ-GYSDFI---NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 D +L Q G I R +I + T K QV++ SATL S +++ + +K M P Sbjct 214 DKMLDQIGKQAQIAHMRRDVQEIFRATPADK--QVMMFSATL-SQEIRPICKKFMRNPLE 270 Query 429 VDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 V + + + + ++ Sbjct 271 VYVDDDTKLTLHGLQQYYIKLSESE----------------------------------- 295 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 K + + +Q IIF ++ + + L++ + F + +H Sbjct 296 -----KNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRE---------CNFPSIAVHS 341 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 ER + + FK+ + R + TDV RGIDI + IN LP + +Y+HR+GR G Sbjct 342 GVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAG 401 Query 608 RAERMGLAISLV-ATEKEKVWYHVCS 632 R GL+IS V + E EKV + Sbjct 402 RFGTKGLSISFVSSEEDEKVLKEIEK 427 Score = 71.3 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (51%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 58 TGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTL 117 Query 62 QIV 64 + Sbjct 118 HQL 120 >sp|A7A0P8|DRS1_YEAS7 ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DRS1 PE=3 SV=1 Length=754 Score = 303 bits (775), Expect = 1e-90, Method: Composition-based stats. Identities = 104/539 (19%), Positives = 204/539 (38%), Gaps = 70/539 (13%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 D+ + +N L L+ + + + +++A + +A Sbjct 225 DEAKKQMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIAL--------LGKDIIAG 276 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 + G ++ + + +++ P+RELA Q + KQ +++ + Sbjct 277 AVTGSGKTAAFMIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSG--I 334 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLS 377 L +GG+ R Q +L++ DIV+ TPGR D + ++ N+ V LV+DEAD +L Sbjct 335 TFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLE 394 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 +G+ D +N + +P Q ++ SAT++S +K L + P + + Sbjct 395 EGFQDELNEIMGLLP------SNRQNLLFSATMNS-KIKSLVSLSLKKPVRIMIDPPKKA 447 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + V + + L Sbjct 448 ATKLTQEFVRIRKRDHLKPALLFN-----------------------------------L 472 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 +R + + ++F K L G S LHG +R + Sbjct 473 IRKLDPTGQKRIVVFVARKETAHRLRIIMGLLG---------MSVGELHGSLTQEQRLDS 523 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 + +FK +V LICTD+A+RG+DI + VIN +P + Y+HR+GR RA R G +++ Sbjct 524 VNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVT 583 Query 618 LV--ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 V +++ + S + T+ K G W +++ +++ E +N TI + Sbjct 584 FVGESSQDRSIVRAAIKSVEENKSLTQGKALGRNVDWV-QIEETNKLVESMNDTIEDILV 642 Query 676 DIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPN 734 + K ++ + + G + H + + + + + LG L Sbjct 643 EEKEE-----KEILRAEMQLRKGENMLKHKKEIQARPRRTWFQSESDKKNSKVLGALSR 696 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 6/106 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+ + + + + + + ++ P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I+ Sbjct 235 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 294 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + K +T + + D G A G+ Sbjct 295 LLYKP------AKIASTRVIVLLPTRELAIQVADVGKQIARFVSGI 334 >sp|A5A6N4|IF4A1_PANTR Eukaryotic initiation factor 4A-I OS=Pan troglodytes OX=9598 GN=EIF4A1 PE=2 SV=1 Length=406 Score = 292 bits (748), Expect = 1e-90, Method: Composition-based stats. Identities = 113/428 (26%), Positives = 186/428 (43%), Gaps = 74/428 (17%) Query 228 FPACVLKNAELK--FNFGEEEFK-------FPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F L + L+ + +G E+ P G+ +++A G K+ + + Sbjct 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSG-TGKTATFAISILQ 92 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q + A +AL++ P+RELA+Q + Y+ IGG R ++ L+ Sbjct 93 QIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGAS---CHACIGGTNVRAEVQKLQM 149 Query 339 G-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 I+VGTPGR+ D+++ L+ ++ VLDEAD +LS+G+ D I + ++ Sbjct 150 EAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL------ 203 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SAT+ S DV ++++K M P + +K E+ + + + V + +L Sbjct 204 NSNTQVVLLSATMPS-DVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKL-- 260 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L Y I QA+IF T+ Sbjct 261 --------------------------------DTLCDLYETLTIT-----QAVIFINTRR 283 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D L + F+ +HGD ER + F+ G R LI TD+ AR Sbjct 284 KVDWLTEKM---------HARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 334 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP ++NY+HRIGR GR R G+ I++V E ++ + + Sbjct 335 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVTINMVTEEDKRTLRDI-----ET 389 Query 638 CYNTRLKE 645 YNT ++E Sbjct 390 FYNTSIEE 397 Score = 95.6 bits (236), Expect = 1e-19, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (40%), Gaps = 3/131 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I + G DV+ A++G+GKT F+I + Sbjct 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI---GSDGLCCQSREVK 117 +Q + LK Q T + Y S A + Q +++ Sbjct 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150 Query 118 EWHGCRATKGL 128 H T G Sbjct 151 APHIIVGTPGR 161 >sp|A1C5V3|DBP3_ASPCL ATP-dependent RNA helicase dbp3 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp3 PE=3 SV=1 Length=503 Score = 295 bits (756), Expect = 1e-90, Method: Composition-based stats. Identities = 107/404 (26%), Positives = 168/404 (42%), Gaps = 65/404 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT---QTKFLPNAPKALIVEPSRELAEQTL 303 + +++ G + ++ + KF P A+I+ P+RELA Q Sbjct 117 PLLFAGRDVIGIAETGSGKTLAFGLPCLKKILDSGKIKFKNARPAAVIISPTRELAMQIY 176 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 + Q KY + ++ I GGV +Q L++ IVV TPGRL DL + G ++L + Sbjct 177 D---QISKYAGSIGIKATCIFGGVKKDEQREALKSAA-IVVATPGRLKDLQNDGSVDLGK 232 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 V++LVLDEAD +L +G+ I + + P + Q ++ +AT V+ L+ M Sbjct 233 VKYLVLDEADRMLDKGFEQDIKDIISSTPD-----SKRQTVMFTATWPP-SVRDLAATFM 286 Query 424 HFPTWVDLKGEDS----VPDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRP 477 V + G+ S + V V K RL + L ++ + Sbjct 287 TSAVTVTIGGDPSADPRANTRIKQTVEVVQSHDKEYRLVQLLSENQRGAAAL-------- 338 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 D+ ++FC K + +E+ + Sbjct 339 -----------------------------DKVLVFCLYKKEAMRVERLL---------RN 360 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 F +HGD HER ++L+ FK G L+ TDVAARG+DI V VINVT P + Sbjct 361 KNFKVAGIHGDLNQHERFKSLDAFKSGAATVLVATDVAARGLDIPSVKLVINVTFPLTVE 420 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 +YVHRIGR GRA G AI+L + + + Sbjct 421 DYVHRIGRTGRAGAEGRAITLFTETDKAQSGALINVLKAAKQEV 464 Score = 106 bits (264), Expect = 9e-23, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 65/142 (46%), Gaps = 16/142 (11%) Query 1 MAAFSEMG-VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +FS + ++ ++ + PT IQ+ + PL+ G DV+ AETGSGKT AF +P Sbjct 85 IISFSHLPSCDSKLYSSLSS--FASPTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLP 142 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA--IGSDGLCC------ 111 ++ + ++ K + + + I S + M YD+ S +A IG C Sbjct 143 CLKKILDSGKIKFKNARPAAVI---ISPTRELAMQIYDQISKYAGSIGIKATCIFGGVKK 199 Query 112 --QSREVKEWHGCRATKGLMKG 131 Q +K AT G +K Sbjct 200 DEQREALKSAAIVVATPGRLKD 221 >sp|Q6LLL5|RHLB_PHOPR ATP-dependent RNA helicase RhlB OS=Photobacterium profundum (strain SS9) OX=298386 GN=rhlB PE=3 SV=1 Length=437 Score = 293 bits (751), Expect = 1e-90, Method: Composition-based stats. Identities = 121/494 (24%), Positives = 192/494 (39%), Gaps = 84/494 (17%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DLGL + + Q ++ L ++ ++ G + Sbjct 11 FADLGLEPTVLEGLDAQGFHYCTPIQALALPVVLTGQD--------IAGQAQTGTGKTLA 62 Query 269 SQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + N P+A+I+ P+RELA Q N+ + + L+ L Sbjct 63 FLTATFNYLLLNPASDERKTNQPRAIIMAPTRELAIQIYNDAAPL---LASTGLKAGLAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG A Q V GVDI++GT GR+ D ++L+ ++ +VLDEAD + G+ I Sbjct 120 GGEAYEKQQKVFAEGVDILIGTCGRIIDFYKQRVIDLASIQVVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P K ++ SATL S+ VK+L+ + M+ P V ++ + Sbjct 180 RFLFRRMPA----PKARLNMLFSATL-SYRVKELAFEHMNSPESVVVEPNQKTGHLIQEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N + RL + L I+E Sbjct 235 LFYPSNQEKMRLLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AIIF TK C+++ + L+GD +R + LE+F + Sbjct 254 EWPDRAIIFANTKHRCEDIWGHL---------AADNHRVGLLNGDVPQKKRVRILEQFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 GD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +IS E Sbjct 305 GDIDILVATDVAARGLHIPQVTHVYNYDLPDDAEDYVHRIGRTGRAGESGSSISFACEEY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + E YN LL E+ L + + + P Sbjct 365 AINLPAIE----------TYIEHPIPLSKYNSEALLDELPAPLRLQRTPRQGGNRRPNGN 414 Query 684 FDGKVTYGQKRAAG 697 G+ GQ R Sbjct 415 RQGQ---GQSRPRN 425 Score = 99.8 bits (247), Expect = 6e-21, Method: Composition-based stats. Identities = 56/357 (16%), Positives = 119/357 (33%), Gaps = 68/357 (19%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ P + + ++ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLEPTVLEGLDAQGFHYCTPIQALALPVVLTGQDIAGQAQTGTGKTLAFLTATFNY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + L + +K + + + Y+ + + G + Sbjct 71 LL--LNPASDERKTNQPRAIIMAPTRELAIQIYN--------------DAAPLLASTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A + + +G+ + +GT + D Y Sbjct 115 AGLAYGGEAYEKQQKVFAEGV----------DILIGT--------------CGRIIDFYK 150 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAELK 239 + +I + +D+ F KD+ F P N + EL Sbjct 151 QRVIDLASIQVVV-LDEADRMFDLGFIKDIRFLFRRMPAPKARLNMLFSATLSYRVKELA 209 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVK-----SQHSGNAQVTQTKFLPNAP-KALIVE 293 F + G++++ + ++ QT P +A+I Sbjct 210 FEHMNSPESVVVE------PNQKTGHLIQEELFYPSNQEKMRLLQTLIEEEWPDRAIIFA 263 Query 294 PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + + ++ R L+ G V + ++ +LE +DI+V T Sbjct 264 NTK-------HRCEDIWGHLAADNHRVGLLNGDVPQKKRVRILEQFTQGDIDILVAT 313 >sp|Q8DDN6|RHLB_VIBVU ATP-dependent RNA helicase RhlB OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=rhlB PE=3 SV=1 Length=435 Score = 293 bits (750), Expect = 1e-90, Method: Composition-based stats. Identities = 113/493 (23%), Positives = 194/493 (39%), Gaps = 81/493 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DLGL ++ ++ + ++ L ++ ++ G + Sbjct 11 FADLGLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQD--------IAGQAQTGTGKTLA 62 Query 269 SQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + T P P+A+I+ P+RELA Q N+ + I + ++ L Sbjct 63 FLTATFNHLLTTPAHEGRQPTQPRAIIMAPTRELAIQIYNDAEPL---IASTGIKAALAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + QL+ L+ GVD+++GT GR+ D NL+ ++ +VLDEAD + G+ I Sbjct 120 GGESYDKQLTKLQGGVDVLIGTTGRIIDFYKQRVFNLNNIQAVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-H 443 + ++P + ++ SATL S+ V++L+ + MH P V ++ E + Sbjct 180 RFLFRRMPA----PQERLNMLFSATL-SYRVQELAFEHMHNPEHVVVEPEQKTGHRIQEE 234 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + P N L + L I+E Sbjct 235 LFYPSNEDKMALLQTL-----------------------------------------IEE 253 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 D+AIIF TK C+++ + G L GD +R++ LE+F + Sbjct 254 EWPDRAIIFANTKYKCESIWAHLAADG---------HRVGLLTGDVPQKKREKILEQFTQ 304 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G V L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G +IS + Sbjct 305 GSVDLLVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEDY 364 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + E Y+ L+ ++ + ++ + Sbjct 365 AINLPAIEE----------YIEHTIPVSDYDSSALIQDLPAPVRTPSARNQQRRTNTGGA 414 Query 684 FDGKVTYGQKRAA 696 G +R Sbjct 415 RSGDRKSNNRRPR 427 Score = 104 bits (259), Expect = 2e-22, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 116/352 (33%), Gaps = 58/352 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ P++ + +E+ + T IQA ++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG++ + + + Y+ + + G + Sbjct 71 LLTTPAH--EGRQPTQPRAIIMAPTRELAIQIYN--------------DAEPLIASTGIK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A G+ Y + QG + +GT + D Y Sbjct 115 AALA-YGGESYDKQLTKLQG---------GVDVLIGTTG--------------RIIDFYK 150 Query 184 EE-FTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAEL 238 + F +++ LD + F KD+ F P N + EL Sbjct 151 QRVFNLNNIQAVVLD--EADRMFDLGFIKDIRFLFRRMPAPQERLNMLFSATLSYRVQEL 208 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 F + + + S A + +A+I ++ Sbjct 209 AFEHMHNPEHVVVEPEQKTGHRIQEELFYPSNEDKMALLQTLIEEEWPDRAIIFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ R L+ G V + + +LE VD++V T Sbjct 267 -----YKCESIWAHLAADGHRVGLLTGDVPQKKREKILEQFTQGSVDLLVAT 313 >sp|B1JQ11|RHLB_YERPY ATP-dependent RNA helicase RhlB OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) OX=502800 GN=rhlB PE=3 SV=1 Length=428 Score = 293 bits (750), Expect = 1e-90, Method: Composition-based stats. Identities = 112/407 (28%), Positives = 173/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q ++ + + Sbjct 51 GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 110 --VTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P V + ++ SATL S+ V++L+ + M+ +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPSV----DKRLNMLFSATL-SYRVRELAFEQMNNAEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + P N + RL + L Sbjct 223 PLQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+ IIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRCIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + LE F KGD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T +L Sbjct 353 SGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRL 399 Score = 109 bits (271), Expect = 6e-24, Method: Composition-based stats. Identities = 60/354 (17%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + EG++ + + + + + + + G + Sbjct 71 LLSHPAE--EGRQTNQPRALIMAPTRELAVQIH--------------SDAESLSQVTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + + + N G Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTTGRLIDYA-------KQNYINLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT-LSYRVREL 208 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVK---SQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 F + L K + + ++ QT P + +I ++ Sbjct 209 AFEQM--NNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ R L+ G VA + +L +LE+ +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVAT 313 >sp|Q66G19|RHLB_YERPS ATP-dependent RNA helicase RhlB OS=Yersinia pseudotuberculosis serotype I (strain IP32953) OX=273123 GN=rhlB PE=3 SV=1 Length=428 Score = 293 bits (750), Expect = 1e-90, Method: Composition-based stats. Identities = 112/407 (28%), Positives = 173/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q ++ + + Sbjct 51 GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 110 --VTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P V + ++ SATL S+ V++L+ + M+ +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPSV----DKRLNMLFSATL-SYRVRELAFEQMNNAEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + P N + RL + L Sbjct 223 PLQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+ IIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRCIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + LE F KGD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T +L Sbjct 353 SGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRL 399 Score = 109 bits (271), Expect = 6e-24, Method: Composition-based stats. Identities = 60/354 (17%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + EG++ + + + + + + + G + Sbjct 71 LLSHPAE--EGRQTNQPRALIMAPTRELAVQIH--------------SDAESLSQVTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + + + N G Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTTGRLIDYA-------KQNYINLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT-LSYRVREL 208 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVK---SQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 F + L K + + ++ QT P + +I ++ Sbjct 209 AFEQM--NNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ R L+ G VA + +L +LE+ +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVAT 313 >sp|A4TRC8|RHLB_YERPP ATP-dependent RNA helicase RhlB OS=Yersinia pestis (strain Pestoides F) OX=386656 GN=rhlB PE=3 SV=1 Length=428 Score = 293 bits (750), Expect = 1e-90, Method: Composition-based stats. Identities = 112/407 (28%), Positives = 173/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q ++ + + Sbjct 51 GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 110 --VTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P V + ++ SATL S+ V++L+ + M+ +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPSV----DKRLNMLFSATL-SYRVRELAFEQMNNAEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + P N + RL + L Sbjct 223 PLQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+ IIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRCIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + LE F KGD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T +L Sbjct 353 SGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRL 399 Score = 109 bits (271), Expect = 6e-24, Method: Composition-based stats. Identities = 60/354 (17%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + EG++ + + + + + + + G + Sbjct 71 LLSHPAE--EGRQTNQPRALIMAPTRELAVQIH--------------SDAESLSQVTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + + + N G Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTTGRLIDYA-------KQNYINLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT-LSYRVREL 208 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVK---SQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 F + L K + + ++ QT P + +I ++ Sbjct 209 AFEQM--NNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ R L+ G VA + +L +LE+ +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVAT 313 >sp|Q1CNK3|RHLB_YERPN ATP-dependent RNA helicase RhlB OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=rhlB PE=3 SV=1 Length=428 Score = 293 bits (750), Expect = 1e-90, Method: Composition-based stats. Identities = 112/407 (28%), Positives = 173/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q ++ + + Sbjct 51 GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 110 --VTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P V + ++ SATL S+ V++L+ + M+ +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPSV----DKRLNMLFSATL-SYRVRELAFEQMNNAEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + P N + RL + L Sbjct 223 PLQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+ IIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRCIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + LE F KGD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T +L Sbjct 353 SGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRL 399 Score = 109 bits (271), Expect = 6e-24, Method: Composition-based stats. Identities = 60/354 (17%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + EG++ + + + + + + + G + Sbjct 71 LLSHPAE--EGRQTNQPRALIMAPTRELAVQIH--------------SDAESLSQVTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + + + N G Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTTGRLIDYA-------KQNYINLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT-LSYRVREL 208 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVK---SQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 F + L K + + ++ QT P + +I ++ Sbjct 209 AFEQM--NNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ R L+ G VA + +L +LE+ +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVAT 313 >sp|Q8ZAD8|RHLB_YERPE ATP-dependent RNA helicase RhlB OS=Yersinia pestis OX=632 GN=rhlB PE=3 SV=1 Length=428 Score = 293 bits (750), Expect = 1e-90, Method: Composition-based stats. Identities = 112/407 (28%), Positives = 173/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q ++ + + Sbjct 51 GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 110 --VTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P V + ++ SATL S+ V++L+ + M+ +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPSV----DKRLNMLFSATL-SYRVRELAFEQMNNAEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + P N + RL + L Sbjct 223 PLQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+ IIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRCIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + LE F KGD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T +L Sbjct 353 SGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRL 399 Score = 109 bits (271), Expect = 6e-24, Method: Composition-based stats. Identities = 60/354 (17%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + EG++ + + + + + + + G + Sbjct 71 LLSHPAE--EGRQTNQPRALIMAPTRELAVQIH--------------SDAESLSQVTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + + + N G Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTTGRLIDYA-------KQNYINLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT-LSYRVREL 208 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVK---SQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 F + L K + + ++ QT P + +I ++ Sbjct 209 AFEQM--NNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ R L+ G VA + +L +LE+ +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVAT 313 >sp|B2K046|RHLB_YERPB ATP-dependent RNA helicase RhlB OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) OX=502801 GN=rhlB PE=3 SV=1 Length=428 Score = 293 bits (750), Expect = 1e-90, Method: Composition-based stats. Identities = 112/407 (28%), Positives = 173/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q ++ + + Sbjct 51 GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 110 --VTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P V + ++ SATL S+ V++L+ + M+ +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPSV----DKRLNMLFSATL-SYRVRELAFEQMNNAEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + P N + RL + L Sbjct 223 PLQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+ IIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRCIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + LE F KGD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T +L Sbjct 353 SGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRL 399 Score = 109 bits (271), Expect = 6e-24, Method: Composition-based stats. Identities = 60/354 (17%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + EG++ + + + + + + + G + Sbjct 71 LLSHPAE--EGRQTNQPRALIMAPTRELAVQIH--------------SDAESLSQVTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + + + N G Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTTGRLIDYA-------KQNYINLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT-LSYRVREL 208 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVK---SQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 F + L K + + ++ QT P + +I ++ Sbjct 209 AFEQM--NNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ R L+ G VA + +L +LE+ +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVAT 313 >sp|Q1CBQ4|RHLB_YERPA ATP-dependent RNA helicase RhlB OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=rhlB PE=3 SV=1 Length=428 Score = 293 bits (750), Expect = 1e-90, Method: Composition-based stats. Identities = 112/407 (28%), Positives = 173/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q ++ + + Sbjct 51 GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 110 --VTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P V + ++ SATL S+ V++L+ + M+ +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPSV----DKRLNMLFSATL-SYRVRELAFEQMNNAEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + P N + RL + L Sbjct 223 PLQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+ IIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRCIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + LE F KGD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T +L Sbjct 353 SGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRL 399 Score = 109 bits (271), Expect = 6e-24, Method: Composition-based stats. Identities = 60/354 (17%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + EG++ + + + + + + + G + Sbjct 71 LLSHPAE--EGRQTNQPRALIMAPTRELAVQIH--------------SDAESLSQVTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + + + N G Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTTGRLIDYA-------KQNYINLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT-LSYRVREL 208 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVK---SQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 F + L K + + ++ QT P + +I ++ Sbjct 209 AFEQM--NNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ R L+ G VA + +L +LE+ +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVAT 313 >sp|A7FD47|RHLB_YERP3 ATP-dependent RNA helicase RhlB OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) OX=349747 GN=rhlB PE=3 SV=1 Length=428 Score = 293 bits (750), Expect = 1e-90, Method: Composition-based stats. Identities = 112/407 (28%), Positives = 173/407 (43%), Gaps = 63/407 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + S + N P+ALI+ P+RELA Q ++ + + Sbjct 51 GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQ- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL VLE+GVDI++GT GRL D +NL ++ +VLDEA Sbjct 110 --VTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEA 167 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + ++P V + ++ SATL S+ V++L+ + M+ +V+++ Sbjct 168 DRMYDLGFIKDIRWLFRRMPSV----DKRLNMLFSATL-SYRVRELAFEQMNNAEYVEVE 222 Query 433 GEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + P N + RL + L Sbjct 223 PLQKTGHRIKEELFYPSNEEKMRLLQTL-------------------------------- 250 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 I+E D+ IIF TK C+ + + G L GD Sbjct 251 ---------IEEEWPDRCIIFANTKHRCEEIWGHLAADG---------HRVGLLTGDVAQ 292 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R + LE F KGD+ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA Sbjct 293 KKRLRILEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGE 352 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 G +ISL E + + G ++ D T +L Sbjct 353 SGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRL 399 Score = 109 bits (271), Expect = 6e-24, Method: Composition-based stats. Identities = 60/354 (17%), Positives = 121/354 (34%), Gaps = 62/354 (18%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA ++PL L G DV A+TG+GKT AF Sbjct 11 FSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + + EG++ + + + + + + + G + Sbjct 71 LLSHPAE--EGRQTNQPRALIMAPTRELAVQIH--------------SDAESLSQVTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + + + N G Sbjct 115 LGLAYGGDGYDKQLKVLESGV----------DILIGTTGRLIDYA-------KQNYINLG 157 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMKNQ--ALFPACVLKNAELKF 240 I + +D+ + KD+ F P + + LF A L + Sbjct 158 A-------IQVVV-LDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT-LSYRVREL 208 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVK---SQHSGNAQVTQTKFLPNAP-KALIVEPSR 296 F + L K + + ++ QT P + +I ++ Sbjct 209 AFEQM--NNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRCIIFANTK 266 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ R L+ G VA + +L +LE+ +DI+V T Sbjct 267 -------HRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDILVAT 313 >sp|Q1EB38|DBP10_COCIM ATP-dependent RNA helicase DBP10 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP10 PE=3 SV=1 Length=927 Score = 307 bits (785), Expect = 1e-90, Method: Composition-based stats. Identities = 105/510 (21%), Positives = 193/510 (38%), Gaps = 34/510 (7%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 ++ VK + +GL + + + ++ + +++ V Sbjct 71 NLKGRTVKKGGGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPLVLDDQD--------VV 122 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 +++ G ++ ++ + LI+ PSRELA QTL +K+ + Sbjct 123 GMARTGSGKTAAFVIPMIEKL-KSHSTKVGSRGLILSPSRELALQTLKVVKELGR---GT 178 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 L+ +L++GG + +Q + DI++ TPGR L L+LS ++++V DEAD L Sbjct 179 DLKCVLLVGGDSLEEQFGYMAGNPDIIIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLF 238 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 G++ + + + +PQ Q ++ SATL V+ + + PT V L E Sbjct 239 EMGFAAQLTEILHGLPQS------RQTLLFSATLPKSLVE-FARAGLQEPTLVRLDTESK 291 Query 437 VPDTVHHVVVPVNP-KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + V V + + + I+ + + S + + Sbjct 292 ISPDLQSVFFTVKSAEKEGALLHILHDVIKVPTGETEAGKHAREQAISGKSSKKRKRSEQ 351 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + IIF TK D + + G F+ +G RK Sbjct 352 NNPNPQESPTEHSTIIFVATKHHVDYIASLLRESG---------FAVSYAYGSLDQTARK 402 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + F+ G L+ TDVAARGIDI + VIN P + + +VHR+GR RA R G + Sbjct 403 IQVSNFRTGISNILVVTDVAARGIDIPILENVINYDFPSQAKIFVHRVGRTARAGRKGWS 462 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE--IEEHLNCTISQV 673 SLV + G+ R +++ + ++ I + Sbjct 463 YSLVRDADAPYLLDLQLFLGRRLVMGRGQQESANFAEDVVVGGMARESIARSCEWVSKLL 522 Query 674 EPDIKVPVD---EFDGKVTYGQKRAAGGGS 700 + DI + G+ Y + R + Sbjct 523 DEDIDIQNQREVAMKGEKLYIRTRNSASAE 552 Score = 99.8 bits (247), Expect = 4e-20, Method: Composition-based stats. Identities = 32/108 (30%), Positives = 50/108 (46%), Gaps = 7/108 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IPL+L DV+ A TGSGKT AF IP+I+ Sbjct 83 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEK 142 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + + G +G S + + G+D C Sbjct 143 LKSH--STKVGSRG-----LILSPSRELALQTLKVVKELGRGTDLKCV 183 >sp|A4RK80|PRP28_PYRO7 Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=PRP28 PE=3 SV=1 Length=674 Score = 300 bits (769), Expect = 1e-90, Method: Composition-based stats. Identities = 106/448 (24%), Positives = 171/448 (38%), Gaps = 90/448 (20%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K ++ A + + +SK G + Sbjct 268 LKDTIKQVGYTEPTPVQRAAIPIAL--------QCRDLIGISKTGSGKTAAFVL---PML 316 Query 278 TQTKFLPN--------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV-A 328 + + LP P ALI+ P+RELA Q + +F + +IG Sbjct 317 SYIEPLPPLNEVTKTEGPYALILAPTRELATQIQAEVIKFA---TRMGFTVVCLIGNKRT 373 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 + L NG +I+V TPGRL D + L LSQ ++VLDEAD ++ G+ D I+++ Sbjct 374 IEEDAFALRNGAEIIVATPGRLVDCLERHLLVLSQCSYVVLDEADRMVDGGFEDSIHKIL 433 Query 389 NQIPQ-------------------VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 +P +T + + Q ++ SAT+ V+++++ + P V Sbjct 434 AALPPSNGKPDDRDAEDPNIMSKFLTPNLRYRQTVMYSATMPP-SVERIAKNYLKHPAMV 492 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + DTV + V + +R Sbjct 493 TIGTIGEAVDTVEQQAMWVVSEDER----------------------------------- 517 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 + + I+F TK +CD + + K FS V LHG++ Sbjct 518 ---RNKLRAMLNTYGTGKLVIVFVNTKSNCDAVAKDL---------KSSSFSAVTLHGNK 565 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 +R+ L+ F+ G L+ TDVAARG+DI V VIN + + Y HRIGR GRA Sbjct 566 TQDQREAALQSFRDGRTNVLVATDVAARGLDIPDVSLVINFNMAGTIEVYTHRIGRTGRA 625 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKG 637 + G+AI+ E V YH+ K Sbjct 626 GKEGMAITFCGPEDHGVLYHLKQIMSKS 653 Score = 101 bits (252), Expect = 6e-21, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 46/107 (43%), Gaps = 1/107 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M + E + + ++++ + PT +Q +IP+ L D++ ++TGSGKT AF +P+ Sbjct 256 MRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLIGISKTGSGKTAAFVLPM 315 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + E L E K + + + FA Sbjct 316 LSYI-EPLPPLNEVTKTEGPYALILAPTRELATQIQAEVIKFATRMG 361 >sp|A7EIX7|SUB2_SCLS1 ATP-dependent RNA helicase sub2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=sub2 PE=3 SV=1 Length=444 Score = 293 bits (750), Expect = 2e-90, Method: Composition-based stats. Identities = 97/385 (25%), Positives = 158/385 (41%), Gaps = 62/385 (16%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L +A G + K+ + Q + + L++ +RELA Q N ++F ++ Sbjct 96 GTDVLCQAKSG-LGKTAVFVLTTLQQVEVVAGETSVLVMCHTRELAYQIRNEYQRFCHFM 154 Query 314 DNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 P ++ + GGV + VL+N I+VGTPGRL+ LV L L+ V+ VLD Sbjct 155 --PDVKIGVFYGGVPISKDVEVLKNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLD 212 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 E D +L + R +I + T K QV++ SATL S +V+ + +K M P + Sbjct 213 ECDKMLD---QIDMRRDVQEIFRATPPQK--QVMMFSATL-SQEVRPICKKFMQNPLEIY 266 Query 431 LKGEDSVPDT-VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + E + + + + + Sbjct 267 IDNETKLTLYGLQQYYIKLEERE------------------------------------- 289 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K + E +Q IIF ++ + L++ + F V +H Sbjct 290 ---KNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRE---------CNFPSVAIHSGV 337 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 ER + FK + R + TDV RGID++ + IN LP + +Y+HR+GR GR Sbjct 338 SQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRF 397 Query 610 ERMGLAISLVATEKEKVWYHVCSSR 634 GLAIS V+ E ++ R Sbjct 398 GTKGLAISFVSNEADQEVLKAVEKR 422 Score = 76.7 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 34/63 (54%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + PE+ +A+ + P+++Q IP + G DVL A++G GKT F + + Sbjct 59 TGFREFLLKPELLRAISWCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLTTL 118 Query 62 QIV 64 Q V Sbjct 119 QQV 121 >sp|A2QEN5|IF4A_ASPNC ATP-dependent RNA helicase eIF4A OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=tif1 PE=3 SV=1 Length=398 Score = 292 bits (746), Expect = 2e-90, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 185/426 (43%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F + LK L+ + +G E + + D +G + + + Sbjct 27 FDSMDLKPELLRGVYAYGFERPSAIQQRAIKPIIAGHDVIAQAQSGTGKTATFSISALQK 86 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 A +ALIV P+RELA+Q + +++ + IGG RD ++ L G Sbjct 87 IDQELKACQALIVAPTRELAQQIQKVVVAIGDFMN---IECHACIGGTNVRDDMNALRAG 143 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 +VVGTPGR+ D++ L Q++ +LDEAD +LS+G+++ I + +PQ T Sbjct 144 PQVVVGTPGRIHDMIERRVLKTDQMKLFILDEADEMLSRGFTEQIYDIFQLLPQST---- 199 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV + SAT+ DV +++ K M P + +K ++ + + + V + +L Sbjct 200 --QVTLLSATMP-QDVLEVTTKFMRDPIRILVKKQELTLEGIKQFYIAVEKEEWKL---- 252 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y I QA+IFC T+ Sbjct 253 ------------------------------DTLSDLYETVTIT-----QAVIFCNTRRKV 277 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D L F+ +HGD + +R ++ F+ G R LI TD+ ARGI Sbjct 278 DWLTDKLT---------ARDFTVSAMHGDMEQGQRDVIMKEFRSGSSRVLIATDLLARGI 328 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP ++NY+HRIGR GR R G+AI+ V + ++ + + Y Sbjct 329 DVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI-----EQFY 383 Query 640 NTRLKE 645 +T+++E Sbjct 384 STQIEE 389 Score = 97.5 bits (241), Expect = 3e-20, Method: Composition-based stats. Identities = 30/133 (23%), Positives = 52/133 (39%), Gaps = 13/133 (10%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + PE+ + V + P+ IQ +I I+ G DV+ A++G+GKT FSI +Q Sbjct 26 SFDSMDLKPELLRGVYAYGFERPSAIQQRAIKPIIAGHDVIAQAQSGTGKTATFSISALQ 85 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA----FAIGSDGLCCQSREVKE 118 + + LK Q + + A I + + Sbjct 86 KIDQELKACQ---------ALIVAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVRDD 136 Query 119 WHGCRATKGLMKG 131 + RA ++ G Sbjct 137 MNALRAGPQVVVG 149 >sp|Q58083|H669_METJA Probable ATP-dependent RNA helicase MJ0669 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0669 PE=1 SV=1 Length=367 Score = 290 bits (743), Expect = 2e-90, Method: Composition-based stats. Identities = 108/435 (25%), Positives = 185/435 (43%), Gaps = 76/435 (17%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 N +L L+ I ++N+ ++ + +E VA ++ G Sbjct 7 NFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEY-------NIVAQARTGSGKTA 59 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 V + N +A+I+ P+RELA Q + I+ K N L+ I GG Sbjct 60 SFAIPLIELVNEN----NGIEAIILTPTRELAIQVADEIESLK---GNKNLKIAKIYGGK 112 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 A Q+ L+N +IVVGTPGR+ D ++ G LNL V++ +LDEAD +L+ G+ + ++ Sbjct 113 AIYPQIKALKN-ANIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEKI 171 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 N K ++++ SAT+ ++ L++K M +++ + + + V Sbjct 172 LNAC------NKDKRILLFSATMP-REILNLAKKYMGDYSFI----KAKINANIEQSYVE 220 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 VN + E R +K + Sbjct 221 VNENE----------------------------------------RFEALCRLLKNKEFY 240 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 ++FC+TK D L G F +HGD +R++ + FK+ +R Sbjct 241 -GLVFCKTKRDTKELASMLRDIG---------FKAGAIHGDLSQSQREKVIRLFKQKKIR 290 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 LI TDV +RGID++ + VIN LP ++Y+HRIGR GRA + G AIS++ + K Sbjct 291 ILIATDVMSRGIDVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRREYKKL 350 Query 628 YHVCSSRGKGCYNTR 642 ++ + + Sbjct 351 RYIERAMKLKIKKLK 365 Score = 89.4 bits (220), Expect = 8e-18, Method: Composition-based stats. Identities = 31/141 (22%), Positives = 57/141 (40%), Gaps = 17/141 (12%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPVIQ 62 F+E+ + I A+ + PTDIQ + IPL L +++ A TGSGKT +F+IP+I+ Sbjct 8 FNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIE 67 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 +V E + + + D + + ++ + +G Sbjct 68 LVNE----------NNGIEAIILTPTRELAIQVADEIESLKGNKN------LKIAKIYGG 111 Query 123 RATKGLMKGKHYYEVSCHDQG 143 +A +K + G Sbjct 112 KAIYPQIKALKNANIVVGTPG 132 >sp|Q2H4D0|SUB2_CHAGB ATP-dependent RNA helicase SUB2 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=SUB2 PE=3 SV=1 Length=434 Score = 293 bits (749), Expect = 2e-90, Method: Composition-based stats. Identities = 112/469 (24%), Positives = 181/469 (39%), Gaps = 79/469 (17%) Query 187 TMHDTIGCYLD-IDKGHVKFSKNGKD-------LGLAFEIPPHMKNQALFPACVLKNAEL 238 D I D ++ + NGK + + + F +LK L Sbjct 3 GEEDLIDYSDDELNNETTAPASNGKKGDAAAAAQNVDKKGSYVGIHSTGFRDFLLKPELL 62 Query 239 KFNFGEEEFKFPPKDGFVALSKA-PDGYIVKSQHSGNAQ--------VTQTKFLPNAPKA 289 + + F+ P + + +A G I+ SG + + Q + + Sbjct 63 R-AIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSV 121 Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG---VDIVVGT 346 L++ +RELA Q N +F KY+ P ++ + GG + VL+N I+VGT Sbjct 122 LVMCHTRELAFQIRNEYNRFSKYM--PDIKTGVFYGGTPIQKDAEVLKNKETHPHIIVGT 179 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGRL+ LV L L VR VLDE D +L + R +I + T K QV++ Sbjct 180 PGRLNALVRDKHLRLGNVRMFVLDECDKMLD---QIDMRRDVQEIFRATPQQK--QVMMF 234 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL ++K + K M PT + + + +P+ + Sbjct 235 SATLAD-EIKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIPLEERE------------- 280 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 K + E + +Q IIF ++ I L++ Sbjct 281 ---------------------------KNRKLNELLDELQFNQVIIFVKSTIRATELDKL 313 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + F + +H ER + + FK+ + R + TDV RGIDI + Sbjct 314 LRE---------CNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERIN 364 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 IN LP + +Y+HR+GR GR GLAIS V ++++K R Sbjct 365 LAINYDLPADADSYLHRVGRAGRFGTKGLAISFVNSDQDKEVLQQIEKR 413 Score = 78.6 bits (192), Expect = 5e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + GGD++ A++G GKT F + + Sbjct 50 TGFRDFLLKPELLRAIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTL 109 Query 62 QIV 64 Q V Sbjct 110 QQV 112 >sp|A1CTZ6|DBP10_ASPCL ATP-dependent RNA helicase dbp10 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp10 PE=3 SV=1 Length=935 Score = 306 bits (784), Expect = 2e-90, Method: Composition-based stats. Identities = 117/488 (24%), Positives = 197/488 (40%), Gaps = 47/488 (10%) Query 190 DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQAL-----FPACVLKNAELKFNFGE 244 D +G ++ D G F + A ++K + + F A L LK Sbjct 51 DFLG-DVNDDDGDEAFI--AQQQTSANRKASNLKGRTVKKGGGFQAMGLSANLLK-AIAR 106 Query 245 EEFKFPPKDGF------------VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIV 292 + F P V +++ G ++ ++ + LI+ Sbjct 107 KGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEKL-RSHSTKVGARGLIL 165 Query 293 EPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDD 352 PSRELA QTL +K+ K L+ +L++GG + +Q +++ DIV+ TPGR Sbjct 166 SPSRELALQTLKVVKELGK---GTDLKCVLLVGGDSLEEQFTMMAGNPDIVIATPGRFLH 222 Query 353 LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS 412 L L+L +R++V DEAD L G++ + + + +P Q ++ SATL Sbjct 223 LKVEMNLDLYSIRYVVFDEADRLFEMGFAAQLTEILHGLP------PNRQTLLFSATLPK 276 Query 413 FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV--VPVNPKTDRLWERLGKSHIRTDDVH 470 V+ + + PT + L E + + + + + K L L + Sbjct 277 SLVE-FARAGLQEPTLIRLDTESKISPDLQNAFFSIKSSEKEGALLYILHEVIKMPTGPT 335 Query 471 AKDNTRPGANSPEMWSEAIKILKGE--YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 R G ++ +S+A K + E AV + I+F TK D L + Sbjct 336 EMAQQRQGEDASARFSKANKRKRAEMEKAVNTKESPTQHSTIVFAATKHHVDYLYSLLHE 395 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 G F+ ++G RK ++ F+ G L+ TDVAARGIDI + VI Sbjct 396 AG---------FAVSYVYGALDQTARKIQVQNFRSGLSNILVVTDVAARGIDIPILANVI 446 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 N P + + ++HR+GR RA R G + SLV + G+ R E+G Sbjct 447 NYDFPSQPKIFIHRVGRTARAGRKGWSYSLVRDADAPYLLDLQLFLGRRLVVGR--ENGD 504 Query 649 CTIWYNEM 656 + ++ Sbjct 505 HVNFAEDV 512 Score = 101 bits (252), Expect = 7e-21, Method: Composition-based stats. Identities = 31/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 91 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEK 150 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + + G +G S + + G+D C Sbjct 151 LRSH--STKVGARG-----LILSPSRELALQTLKVVKELGKGTDLKCV 191 >sp|Q1DI07|SUB2_COCIM ATP-dependent RNA helicase SUB2 OS=Coccidioides immitis (strain RS) OX=246410 GN=SUB2 PE=3 SV=1 Length=443 Score = 293 bits (749), Expect = 2e-90, Method: Composition-based stats. Identities = 94/384 (24%), Positives = 161/384 (42%), Gaps = 63/384 (16%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 L +A G + K+ + Q + +P L++ +RELA Q N +F KY+ Sbjct 97 KVDVLCQAKSG-LGKTAVFVLTTLNQLEPVPGECSILVMCHTRELAYQIKNEYARFSKYL 155 Query 314 DNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 P ++ + GG + + VL + +IVVGTPGRL+ LV KL+L ++ VLD Sbjct 156 --PDVKTAVFYGGTPMQKDIEVLSSKDTYPNIVVGTPGRLNALVREKKLSLRNIKAFVLD 213 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 E D +L + R +I + T K QV++ SATL S +++ + +K M P V Sbjct 214 ECDKMLD---QIDMRRDVQEIFRSTPADK--QVMMFSATL-SQEIRPICKKFMRNPLEVY 267 Query 431 LKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + + + + ++ Sbjct 268 VDDDTKLTLHGLQQYYIKLSEAE------------------------------------- 290 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K + + +Q IIF ++ + + L++ + F + +H Sbjct 291 ---KNRKLNELLDNLEFNQVIIFVKSTLRANELDKLLRE---------CNFPSIAVHSGV 338 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 ER + + FK+ + R + TDV RGIDI + IN +P + +Y+HR+GR GR Sbjct 339 SQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDMPADADSYLHRVGRAGRF 398 Query 610 ERMGLAISLVATEKE-KVWYHVCS 632 GL+IS V++E + K + Sbjct 399 GTKGLSISFVSSEDDMKTLKDIEK 422 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 17/63 (27%), Positives = 33/63 (52%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 60 TGFRDFLLKPELLRAITDCGFEHPSEVQQVCIPTAILKVDVLCQAKSGLGKTAVFVLTTL 119 Query 62 QIV 64 + Sbjct 120 NQL 122 >sp|A1SAL1|RHLB_SHEAM ATP-dependent RNA helicase RhlB OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) OX=326297 GN=rhlB PE=3 SV=1 Length=439 Score = 293 bits (749), Expect = 2e-90, Method: Composition-based stats. Identities = 106/413 (26%), Positives = 168/413 (41%), Gaps = 65/413 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQ 301 K ++ G + T +P N P+A+++ P+RELA Q Sbjct 41 PVLLEKKDIAGQAQTGTGKTLAFLV-ATFNHLLTTPVPEHRQLNQPRAIVMAPTRELAIQ 99 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL 361 + K+ L+ ++ GG Q VL+ GVD+++GT GR+ D V G +NL Sbjct 100 IAKDATLLSKH---SGLKVGIVYGGEGYEAQRKVLDKGVDVLIGTTGRIIDYVRQGVINL 156 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 ++ +VLDEAD + G+ I + N++P K ++ SATL S V++L+ Sbjct 157 GAIQAVVLDEADRMFDLGFIKDIRFLFNRMPGA----KERLNMLFSATL-SMKVQELAYD 211 Query 422 IMHFPTWVDLKGEDSVPDTVH-HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 M+ P V++ E+ + + P +L L Sbjct 212 HMNDPVKVEIAPEEKTSRNIKEEIFYPSMEDKLKLLHSL--------------------- 250 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 I+E ++AI+F TK C+NL G Sbjct 251 --------------------IEEDWPEKAIVFANTKYQCENLWASLEADG---------H 281 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 L GD +R + LE+F + ++ L+ TDVAARG+ I V +V N LPD+ ++YV Sbjct 282 RVGLLTGDVPQKKRLKILEQFTQSELDILVATDVAARGLHISDVSHVYNYDLPDDCEDYV 341 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 HRIGR GRA + G+++S E + T D I Sbjct 342 HRIGRTGRAGQKGVSVSFACEEYALNLPAIEDYIKHSIPVTSYDRDALIDIPP 394 Score = 97.5 bits (241), Expect = 3e-20, Method: Composition-based stats. Identities = 63/352 (18%), Positives = 115/352 (33%), Gaps = 58/352 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + E+ QA+ E + T IQA S+P++L D+ A+TG+GKT AF + Sbjct 11 FADLPLCDEVKQALNENGFEHCTPIQALSLPVLLEKKDIAGQAQTGTGKTLAFLVATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T E ++ + + + + + GL V G Sbjct 71 LLTTP--VPEHRQLNQPRAIVMAPTRELAIQI-AKDATLLSKHSGLKVG--IVYGGEGYE 125 Query 124 ATKGL-MKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNY 182 A + + KG +V G R+ Q ++LG + Sbjct 126 AQRKVLDKGV---DVLIGTTG--RIIDYVRQGVINLGAIQ-------------------- 160 Query 183 GEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMK---NQALFPACVLKNAEL 238 + +D+ F KD+ F P K N +K EL Sbjct 161 ------------AVVLDEADRMFDLGFIKDIRFLFNRMPGAKERLNMLFSATLSMKVQEL 208 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 ++ + K + S + KA++ ++ Sbjct 209 AYDHMNDPVKVEIAPEEKTSRNIKEEIFYPSMEDKLKLLHSLIEEDWPEKAIVFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 Q + ++ R L+ G V + +L +LE +DI+V T Sbjct 267 -YQ----CENLWASLEADGHRVGLLTGDVPQKKRLKILEQFTQSELDILVAT 313 >sp|A7EYW0|DBP3_SCLS1 ATP-dependent RNA helicase dbp3 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp3 PE=3 SV=2 Length=596 Score = 298 bits (762), Expect = 2e-90, Method: Composition-based stats. Identities = 108/391 (28%), Positives = 174/391 (45%), Gaps = 63/391 (16%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTK--FLPNAPKALIVEPSRELAEQTLNNIKQF 309 + +++ G + ++ P+A++V P+RELA Q+ I + Sbjct 216 GRDVIGVAETGSGKTMAFAVPCVRYMSSLPKNQKNKGPRAVVVSPTRELAMQSYEQIVKL 275 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL 369 K L + + GGV +Q+ L+ DIVV TPGRL+DL++ G +LS+ R++VL Sbjct 276 AK---ASGLECVCVYGGVPKDEQIRALKT-ADIVVATPGRLNDLINQGCADLSKARYVVL 331 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD +L +G+ + I ++ N P + + Q ++ +AT V++L+ M P + Sbjct 332 DEADRMLDKGFEEEIRKIINTTPSLG----KRQTLMFTATWP-ESVRELASTFMTSPVKI 386 Query 430 DLK----GEDSVPDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 + G+ + V V P K RL + L + Sbjct 387 AIGDNPTGDLRANSRIVQKVEVVEPRDKEYRLMQLLKQ---------------------- 424 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 K D+ ++FC K + +E + Q+G F Sbjct 425 ---------------YQSGSQKDDRILVFCLYKKEATRVEGFIRQKG---------FRVA 460 Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +HGD +R ++LE FK G+ L+ TDVAARG+DI V VIN T P ++YVHRI Sbjct 461 GIHGDLSQEQRTRSLEAFKSGNTPVLVATDVAARGLDIPAVKLVINCTFPLTVEDYVHRI 520 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 GR GRA + GLAI+L + + + Sbjct 521 GRTGRAGKDGLAITLFTEHDKAQSGALINVL 551 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 40/138 (29%), Positives = 59/138 (43%), Gaps = 15/138 (11%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + +A + D+ PT IQA + P +L G DV+ AETGSGKT AF++P ++ Sbjct 182 FDYLPITDSAQRAPFK-DFKAPTPIQAAAWPFLLAGRDVIGVAETGSGKTMAFAVPCVRY 240 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC----------QS 113 + K+Q K K S + M Y++ A S C Q Sbjct 241 MSSLPKNQ----KNKGPRAVVVSPTRELAMQSYEQIVKLAKASGLECVCVYGGVPKDEQI 296 Query 114 REVKEWHGCRATKGLMKG 131 R +K AT G + Sbjct 297 RALKTADIVVATPGRLND 314 >sp|Q6C9P3|DBP3_YARLI ATP-dependent RNA helicase DBP3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP3 PE=3 SV=1 Length=532 Score = 295 bits (756), Expect = 3e-90, Method: Composition-based stats. Identities = 117/478 (24%), Positives = 194/478 (41%), Gaps = 70/478 (15%) Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVA 257 + + + G+ + E + + + KD V Sbjct 110 FKEHTI--TIEGEQMRPTMEFSHVTLDPRITKVLTKFPRPTPIQAVSWPYLLAGKD-MVG 166 Query 258 LSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 +++ G V T + L+V P+RELA Q +NIK+ D Sbjct 167 VAETGSGKTFTFAVPALEHVLSTSG-GKGVRVLVVSPTRELAMQIYDNIKEL---CDVVG 222 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 L + + GGV Q S L+ V+ TPGRL DL+ G +LS+V +LVLDEAD +L Sbjct 223 LHAVCVYGGVPKEQQRSDLKR-ASFVIATPGRLCDLIDEGSCDLSKVSYLVLDEADRMLE 281 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 +G+ + I ++ ++ Q ++ SAT +V+KL+E M PT V + D + Sbjct 282 KGFEEDIKKIIG-----STRPTGRQTVMFSATWPP-EVRKLAEGFMKTPTKVMIGERDEL 335 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 R+ + + R + D R AN Sbjct 336 AAN------------KRITQSVEVLDPRAKEGRLLDLLRQYANDDF-------------- 369 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 + +IF K + +E ++G + +HGD +R + Sbjct 370 ----------KILIFALYKKEATRVENTLTRRG---------YGVAAIHGDLSQQQRTKA 410 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 L+ FKKG+ L+ TDVAARG+DI V VIN+T P ++YVHRIGR GRA + G AI+ Sbjct 411 LDEFKKGEKNILLATDVAARGLDIPNVKLVINLTFPLTVEDYVHRIGRTGRAGKTGQAIT 470 Query 618 LVATEKEKVWYHVCSSRG-----------KGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 L ++ + + + K +T+ KE G ++ ++ + + ++ Sbjct 471 LFTEHEKHLSGALINVLRGADQPVPDELLKFGGHTKKKEHGAYGAFFKDVDMTKKAKK 528 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 39/136 (29%), Positives = 58/136 (43%), Gaps = 19/136 (14%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P I + + + + PT IQA S P +L G D++ AETGSGKT F++P ++ Sbjct 128 FSHVTLDPRITKVLTK--FPRPTPIQAVSWPYLLAGKDMVGVAETGSGKTFTFAVPALEH 185 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF--AIGSDGLCC--------QS 113 V T GK S + M YD +G +C Q Sbjct 186 VLSTSG-------GKGVRVLVVSPTRELAMQIYDNIKELCDVVGLHAVCVYGGVPKEQQR 238 Query 114 REVKEWHGCRATKGLM 129 ++K AT G + Sbjct 239 SDLKRASFVIATPGRL 254 >sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=prp-5 PE=3 SV=1 Length=1194 Score = 310 bits (794), Expect = 3e-90, Method: Composition-based stats. Identities = 109/446 (24%), Positives = 187/446 (42%), Gaps = 75/446 (17%) Query 231 CVLKNAELKF--NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL----- 283 C L L + G E+ + D V SG L Sbjct 566 CGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPMLRHVKD 625 Query 284 ------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + ALI+ P+REL Q ++++ F K + KLR + GG A +DQ++ L+ Sbjct 626 QDPVTGDDGAIALIMTPTRELCTQIYSDLQPFAKAL---KLRVVAAYGGNAIKDQIAELK 682 Query 338 NGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 G +I+V TPGRL DL++ NL + +LVLDEAD + G+ + ++ N + Sbjct 683 RGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNV--- 739 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP--KT 452 Q I+ SAT+ + L++K++ P + + G V + +V ++ K Sbjct 740 ---RPDRQTILFSATMPRI-IDALTKKVLRDPVEITVGGRSVVAPEITQIVEVMDEGKKF 795 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 +RL E LG+ + DDV +++IF Sbjct 796 NRLLELLGELYADDDDV--------------------------------------RSLIF 817 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 + D+L + +++G + C+ +HG + +R + FKKG LI T Sbjct 818 VERQEKADDLLRELLRRG---------YGCMSIHGGKDQEDRNSTISDFKKGVCPILIAT 868 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 +AARG+D+ + VIN P+ ++YVHR GR GRA G A++ + E+E + Sbjct 869 SIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCASGIAK 928 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQL 658 + + + + W +++ Sbjct 929 ALEQSGQPVPDRLNEMRKAWKEKVKA 954 Score = 112 bits (279), Expect = 5e-24, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 127/372 (34%), Gaps = 51/372 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ I +E + + PT IQ +++P+I+ G DV+ A+TGSGKT AF++P+ Sbjct 560 VQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPM 619 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 ++ V KDQ I + + Y FA + R V + Sbjct 620 LRHV----KDQDPVTGDDGAIALIMTPTRELCTQIYSDLQPFAK-----ALKLRVVAAYG 670 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 G + + K E+ G + + + + + F+ Sbjct 671 GNAIKDQIAELKRGAEIIVATPGRL-IDLLAANGGRVTNLKRATYLVLDEADRMFDMGFE 729 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 + + + D+ + FS I + + L + Sbjct 730 PQVMKIFNN------VRPDRQTILFSA------TMPRIIDALTKKVLRDPV-------EI 770 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 G P V + + + + + + ++LI +E A+ Sbjct 771 TVGGRSVVAPEITQIVEVMDEGKKF-----NRLLELLGELYADDDDVRSLIFVERQEKAD 825 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ---LSVLENG-VDIVVGTPGRLDDLVST 356 L + + + I GG D+ +S + G I++ T ++ Sbjct 826 DLLRELLR-------RGYGCMSIHGGKDQEDRNSTISDFKKGVCPILIAT------SIAA 872 Query 357 GKLNLSQVRFLV 368 L++ Q++ ++ Sbjct 873 RGLDVKQLKLVI 884 >sp|P21693|DBPA_ECOLI ATP-dependent RNA helicase DbpA OS=Escherichia coli (strain K12) OX=83333 GN=dbpA PE=1 SV=2 Length=457 Score = 293 bits (750), Expect = 3e-90, Method: Composition-based stats. Identities = 102/388 (26%), Positives = 159/388 (41%), Gaps = 65/388 (17%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNA------QVTQTKFLPNAPKALIVEPS 295 G A+ D + SG + Q +AL++ P+ Sbjct 21 LGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPT 80 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS 355 RELA+Q +++ +++ N K+ L GG Q L++ I+V TPGRL D + Sbjct 81 RELADQVAGELRRLARFLPNTKILTLC--GGQPFGMQRDSLQHAPHIIVATPGRLLDHLQ 138 Query 356 TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV 415 G ++L + LV+DEAD +L G+SD I+ + P Q ++ SAT + Sbjct 139 KGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPAS------RQTLLFSATWPEA-I 191 Query 416 KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNT 475 +S ++ P +++ D++P + L +RL Sbjct 192 AAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRL---------------- 235 Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 + H+ ++FC TK DC + + G Sbjct 236 -------------------------LSLHQPSSCVVFCNTKKDCQAVCDALNEVGQ---- 266 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 S + LHGD + +R Q L RF G R L+ TDVAARG+DI + V+N L + Sbjct 267 -----SALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWD 321 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEK 623 + +VHRIGR RA GLAIS A E+ Sbjct 322 PEVHVHRIGRTARAGNSGLAISFCAPEE 349 Score = 89.0 bits (219), Expect = 3e-17, Method: Composition-based stats. Identities = 28/73 (38%), Positives = 43/73 (59%), Gaps = 1/73 (1%) Query 1 MAAFSEMG-VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 M AFS + + P + E+ +L T +QA ++P IL G DV + A+TGSGKT AF + Sbjct 1 MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLG 60 Query 60 VIQIVYETLKDQQ 72 ++Q + +L Q Sbjct 61 LLQQIDASLFQTQ 73 >sp|Q54VT4|DDX47_DICDI Probable ATP-dependent RNA helicase ddx47 OS=Dictyostelium discoideum OX=44689 GN=ddx47 PE=3 SV=1 Length=546 Score = 296 bits (757), Expect = 3e-90, Method: Composition-based stats. Identities = 102/484 (21%), Positives = 173/484 (36%), Gaps = 77/484 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + LG+ +I ++ + + + L++ G Sbjct 121 FESLGVHPQIIDACNKLGFNKPKEIQRESIPWAL--------KGRDIIGLAQTGSGKTAA 172 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ + P L + P+RELA Q + I ++ +++GG+ Sbjct 173 FVIPVLQKLLEA---PQGLFCLALAPTRELAYQIADQFNAIGSTIG---VKTCVLVGGID 226 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 + Q L +VVG+PGR+ + T NL +++ ++DEAD L S + + +N + Sbjct 227 SMSQSLALAKKPHVVVGSPGRVLHHLEHTKGFNLRSIKYFIMDEADRLFSADFEEEVNNI 286 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 IP K + SAT+ S V KL + P V + + DT+ + Sbjct 287 LKVIP------KERNTYLFSATMTS-KVAKLQRASLVNPVKVQVASKYQTVDTLLQQYLF 339 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V K K Y + E + Sbjct 340 VPFK----------------------------------------YKDCYLAYILNELAGN 359 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 IIF T + G F + ++GD +R +L +FK+G Sbjct 360 LTIIFTSTCASSTKIAMMLRNLG---------FGAIPINGDMDQGKRLASLNKFKQGTKS 410 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+DI V VIN +P + YVHR+GR RA G AI++V +++ Sbjct 411 ILVATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVTQYDVEMY 470 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + K + +E+ I+ +Q E H T + + D G Sbjct 471 QRIEFVLKKKLDSFPCQEE-TVLIFLERVQ-----EAHRIATNELKDKNYSSSSDRHSGD 524 Query 688 VTYG 691 Sbjct 525 SEGS 528 Score = 110 bits (276), Expect = 4e-24, Method: Composition-based stats. Identities = 33/109 (30%), Positives = 49/109 (45%), Gaps = 9/109 (8%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +GV P+I A ++ + P +IQ ESIP L G D++ A+TGSGKT AF IPV+Q Sbjct 120 TFESLGVHPQIIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQ 179 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + E + + + D+ +A C Sbjct 180 KLLE---------APQGLFCLALAPTRELAYQIADQFNAIGSTIGVKTC 219 >sp|Q9M2E0|RH12_ARATH DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana OX=3702 GN=RH12 PE=2 SV=1 Length=498 Score = 294 bits (753), Expect = 4e-90, Method: Composition-based stats. Identities = 111/449 (25%), Positives = 175/449 (39%), Gaps = 80/449 (18%) Query 206 SKNGKDLGLAFEIPPHMK----------NQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 NG+D +PP F LK LK + E+ F+ P Sbjct 94 DANGQDWKATLRLPPPDTRYQTADVTATKGNEFEDYFLKRDLLKGIY-EKGFEKPSPIQE 152 Query 256 VALSKAPDGY-IVKSQHSGNAQ--------VTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 ++ A G I+ +G + + + N +A+I+ P+RELA QT Sbjct 153 ESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVC 212 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 K+ KY++ ++ ++ GG + RD + L V ++VGTPGR+ DL G L Sbjct 213 KELSKYLN---IQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAM 269 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 LV+DEAD LLS + + + +PQ Q ++ SAT VK ++ + P Sbjct 270 LVMDEADKLLSAEFQPSLEELIQFLPQ------NRQFLMFSATFP-VTVKAFKDRHLRKP 322 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 ++L + V V + Sbjct 323 YVINLM-DQLTLMGVTQYYAFVEERQ---------------------------------- 347 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 K + +++Q+IIFC + + L + + G +SC +H Sbjct 348 ------KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELG---------YSCFYIH 392 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 R + F+ G R L+CTD+ RGIDI V VIN P ++Y+HR+GR Sbjct 393 AKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRS 452 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRG 635 GR +GLA++LV E Y G Sbjct 453 GRFGHLGLAVNLVTYEDRFKMYQTEQELG 481 Score = 96.0 bits (237), Expect = 2e-19, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + ++ + + E + P+ IQ ESIP+ L G D+L A+ G+GKTGAF IPV++ Sbjct 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + Q + + Sbjct 186 IDPNNNVIQ---------AMILVPTRELALQ 207 >sp|Q94BV4|RH6_ARATH DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana OX=3702 GN=RH6 PE=2 SV=2 Length=528 Score = 295 bits (755), Expect = 4e-90, Method: Composition-based stats. Identities = 113/465 (24%), Positives = 180/465 (39%), Gaps = 84/465 (18%) Query 194 CYLDIDKGHV----KFSKNGKDLGLAFEIPPHM----------KNQALFPACVLKNAELK 239 Y+D + V N +D ++PP F LK L+ Sbjct 108 SYIDEVEKTVQSEAISDSNNEDWKATLKLPPRDNRYQTEDVTATKGNEFEDYFLKRDLLR 167 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGY-IVKSQHSGNAQ--------VTQTKFLPNAPKAL 290 + E+ F+ P ++ A G I+ +G + + + N +A+ Sbjct 168 GIY-EKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAV 226 Query 291 IVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRL 350 I+ P+RELA QT K+ KY+ K+ ++ GG + RD + L V ++VGTPGR+ Sbjct 227 ILVPTRELALQTSQVCKELSKYL---KIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRI 283 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 DL G L LV+DEAD LLS + I + +P + Q+++ SAT Sbjct 284 LDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLP------ESRQILMFSATF 337 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 VK ++ + P ++L + V V + Sbjct 338 P-VTVKSFKDRYLKKPYIINLM-DQLTLMGVTQYYAFVEERQ------------------ 377 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + +++Q+IIFC + + L + + G Sbjct 378 ----------------------KVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELG 415 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 +SC +H R + F+ G R L+CTD+ RGIDI V VIN Sbjct 416 ---------YSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINF 466 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 P ++Y+HR+GR GR +GLA++LV E Y G Sbjct 467 DFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 511 Score = 94.0 bits (232), Expect = 9e-19, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + ++ + + E + P+ IQ ESIP+ L G D+L A+ G+GKTGAF IP ++ Sbjct 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + + + + Sbjct 216 I---------DPENNVIQAVILVPTRELALQ 237 >sp|Q6H7S2|RH8_ORYSJ DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0641800 PE=2 SV=2 Length=508 Score = 294 bits (753), Expect = 4e-90, Method: Composition-based stats. Identities = 96/382 (25%), Positives = 161/382 (42%), Gaps = 61/382 (16%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L++A +G K+ + + NA + +I+ P+RELA QT K+ K++ Sbjct 171 GSDILARAKNG-TGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHL 229 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 K++ ++ GG + +D + L V ++VGTPGR+ DL G L L++DEAD Sbjct 230 ---KIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEAD 286 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LLS + + ++ +P Q+++ SAT VK+ +K + P ++L Sbjct 287 KLLSPEFQPSVEQLIRYLPAS------RQILMFSATFP-VTVKEFKDKYLPKPYVINLMD 339 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E ++ + V + K Sbjct 340 ELTLK-GITQFYAFVEERQ----------------------------------------K 358 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + +++Q+IIFC + + L + + G +SC +H Sbjct 359 VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELG---------YSCFYIHAKMLQDH 409 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F+ G R L+CTD+ RGIDI V VIN P + Y+HR+GR GR +G Sbjct 410 RNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLG 469 Query 614 LAISLVATEKEKVWYHVCSSRG 635 LA++L+ E Y + G Sbjct 470 LAVNLITYEDRFNLYRIEQELG 491 Score = 96.7 bits (239), Expect = 1e-19, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP ++ Sbjct 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 195 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + + Q + + Sbjct 196 IDQEKNAIQV---------VILVPTRELALQ 217 >sp|Q1E5R1|DHH1_COCIM ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis (strain RS) OX=246410 GN=DHH1 PE=3 SV=1 Length=512 Score = 294 bits (753), Expect = 4e-90, Method: Composition-based stats. Identities = 111/425 (26%), Positives = 174/425 (41%), Gaps = 68/425 (16%) Query 213 GLAFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 GL FE +F A K + + +EE G L++A +G K+ Sbjct 46 GLEFEDFYIKRELMMGIFEAGFEKPSPI-----QEETIPVALTGRDILARAKNG-TGKTA 99 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + +T + +ALI+ P+RELA QT K K++ + ++ GG + Sbjct 100 AFVIPTLERTNPKISKTQALILVPTRELALQTSQVCKTLGKHLG---INVMVTTGGTGLQ 156 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L + V I+VGTPGR+ DL S G +LS+ V+DEAD LLS ++ I ++ + Sbjct 157 DDIIRLSDTVHIIVGTPGRILDLASKGVADLSECTTFVMDEADKLLSPEFTPVIEQLLSF 216 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 P K QV++ SAT VK +K M P ++L ++ + V Sbjct 217 HP------KDRQVMLFSATFP-MIVKSFKDKHMRNPYEINLM-DELTLRGITQYYAFVEE 268 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 + K + +++Q+I Sbjct 269 RQ----------------------------------------KVHCLNTLFSKLQINQSI 288 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC H R + F+ G R L+ Sbjct 289 IFCNSTNRVELLAKKITELG---------YSCFYSHARMLQQNRNRVFHDFRNGVCRNLV 339 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Y + Sbjct 340 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRYNLYKI 399 Query 631 CSSRG 635 G Sbjct 400 EQELG 404 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLE- 107 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + K T + + Sbjct 108 --------RTNPKISKTQALILVPTRELALQ 130 >sp|Q6BTL5|DRS1_DEBHA ATP-dependent RNA helicase DRS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DRS1 PE=3 SV=1 Length=771 Score = 302 bits (772), Expect = 5e-90, Method: Composition-based stats. Identities = 104/523 (20%), Positives = 203/523 (39%), Gaps = 67/523 (13%) Query 178 QFDNYGEEFTMHDTIGCYLDIDKGHVK---FSKNGKDLGLAFEIPPHMKNQALFPACVLK 234 Q D E T D Y D ++ + L L+ + + ++ Sbjct 226 QEDEKPVEDTAEDMAEFYADEEEATTAKKQLHTTFQSLQLSRPVLKGLSQLGYTKPSPIQ 285 Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEP 294 +A + VA + G ++ ++ + +++ P Sbjct 286 SACIPIAL--------LGKDIVAGAVTGSGKTAAYMIPIIERLLYKPAKISSTRVIVLAP 337 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV 354 +RELA Q + K+ ++++N L L +GG+ R Q L+ DIV+ TPGRL D + Sbjct 338 TRELAIQVCDVGKKIGQFVNN--LNFGLAVGGLNLRQQEQQLKTRPDIVIATPGRLIDHI 395 Query 355 -STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 ++ ++ + LV+DEAD +L +G+ + + + IP+ + Q ++ SAT+++ Sbjct 396 RNSPSFSIDSLEVLVIDEADRMLDEGFQAELTEILSLIPR-----HKRQTLLYSATMNT- 449 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 ++ L + + P V + S + V + + L + Sbjct 450 KIQDLIQLSLQKPVRVMIDPPKSAAIKLVQEFVRIRKRDHLKPALLFQ------------ 497 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 ++++ + ++ ++F K L G Sbjct 498 -----------------------LIKSVDPSQQNRIVVFVARKESAHKLRIILGLLG--- 531 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP 593 LHG +R ++ FK V LICTD+AARG+DI + VIN +P Sbjct 532 ------MRVSELHGSLTQEQRLASVNDFKNLTVPVLICTDLAARGLDIPKIEIVINYDMP 585 Query 594 DEKQNYVHRIGRVGRAERMGLAISLV--ATEKEKVWYHVCSSRG-KGCYNTRLKEDGGCT 650 + Y+HR+GR RA R G +I+ V +T+ + S + N++ + Sbjct 586 KTHEIYLHRVGRTARAGREGKSITFVGESTQDRAIVKDAIKSISEEQARNSKQGKAVSRN 645 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQK 693 + + E++ L++I E I +V + K + ++ + Sbjct 646 VDWKEVEELNKIVESKATVIEEVLDEEKQAKEMLHAEMELSKA 688 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 47/108 (44%), Gaps = 6/108 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + + + + ++ + P+ IQ+ IP+ L G D++ A TGSGKT A+ IP+I Sbjct 258 TTFQSLQLSRPVLKGLSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPII 317 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + K +T + + + D G + L Sbjct 318 ERLLYKP------AKISSTRVIVLAPTRELAIQVCDVGKKIGQFVNNL 359 >sp|Q4WH83|DBP3_ASPFU ATP-dependent RNA helicase dbp3 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp3 PE=3 SV=1 Length=503 Score = 294 bits (752), Expect = 5e-90, Method: Composition-based stats. Identities = 111/397 (28%), Positives = 165/397 (42%), Gaps = 65/397 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT---QTKFLPNAPKALIVEPSRELAEQTL 303 + +++ G + ++ + K P A+I+ P+RELA Q Sbjct 117 PLLFAGRDVIGIAETGSGKTLAFGLPCIKKILDSGKVKRKHARPAAVIISPTRELAMQIY 176 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 + Q K+ + +R I GGV +Q L+ IVV TPGRL DL G ++L + Sbjct 177 D---QLSKFGASVDIRVTCIYGGVKKDEQREALKTAA-IVVATPGRLKDLKDDGSVDLGK 232 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 V++LVLDEAD +L +G+ I + P T Q ++ +AT V+ L+ M Sbjct 233 VKYLVLDEADRMLDKGFEQDIKDIIRSTPDST-----RQTVMFTATWPP-SVRDLAASFM 286 Query 424 HFPTWVDLKGEDSV----PDTVHHVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRP 477 V + G+ S + VV V P K RL + L +S Sbjct 287 TSAVTVTIGGDPSADPRANTRIKQVVEVVKPQEKEARLVQLLSRSQRGAAV--------- 337 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 D+ ++FC K + +E+ + Sbjct 338 ----------------------------GDKVLVFCLYKKEAVRVERLL---------RS 360 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 F +HGD HER ++LE FK G L+ TDVAARG+DI V VINVT P + Sbjct 361 KNFKVAGIHGDLNQHERFKSLEAFKTGSATVLVATDVAARGLDIPSVKLVINVTFPLTVE 420 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 +YVHRIGR GRA G AI+L + + + Sbjct 421 DYVHRIGRTGRAGADGHAITLFTEADKAQSGALINVL 457 Score = 106 bits (265), Expect = 7e-23, Method: Composition-based stats. Identities = 40/143 (28%), Positives = 64/143 (45%), Gaps = 18/143 (13%) Query 1 MAAFSEMGVMPEIAQAVEE--MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 + +FS + P + + + PT IQ+ + PL+ G DV+ AETGSGKT AF + Sbjct 85 IMSFSHL---PSSFSKIYDPLSSFSSPTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGL 141 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC------ 111 P I+ + ++ K +++ + I S + M YD+ S F D + C Sbjct 142 PCIKKILDSGKVKRKHARPAAVI---ISPTRELAMQIYDQLSKFGASVDIRVTCIYGGVK 198 Query 112 ---QSREVKEWHGCRATKGLMKG 131 Q +K AT G +K Sbjct 199 KDEQREALKTAAIVVATPGRLKD 221 >sp|Q26696|DDX17_TRYBB Putative DEAD-box RNA helicase HEL64 OS=Trypanosoma brucei brucei OX=5702 GN=HEL64 PE=3 SV=1 Length=568 Score = 296 bits (757), Expect = 5e-90, Method: Composition-based stats. Identities = 99/487 (20%), Positives = 183/487 (38%), Gaps = 72/487 (15%) Query 177 KQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA 236 + + ++ I + D + S + + + + Q ++ Sbjct 73 QLSEEEATKWREEHVITIFGDDCPPPMS-SFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQ 131 Query 237 ELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP--NAPKALIVEP 294 V ++K G + A + + L + P +++ P Sbjct 132 SWPVLLS--------GRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAP 183 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV 354 +RELA+Q K+ + + + GG QL +L GV I+V TPGRL D + Sbjct 184 TRELAQQIEEETKK----VIPGDVYCGCVYGGAPKGPQLGLLRRGVHILVATPGRLIDFL 239 Query 355 STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD 414 ++NL +V +LVLDEAD +L G+ + ++ QI Q ++ SAT + Sbjct 240 DIKRINLHRVTYLVLDEADRMLDMGFEPQVRKICGQI------RPDRQTVMFSATWP-RE 292 Query 415 VKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 +++L+ + + + E V + Sbjct 293 IQRLAAEFQKQWIRISVGSTELQANKDVTQRFILTQE----------------------- 329 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 K + + ++EH+ ++ ++FC+ K D LE+ + G Sbjct 330 -----------------FAKQDELRKLMQEHREERVLVFCKMKRTADELERQLRRWG--- 369 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP 593 + + +HGD++ +R+ L RF+K L+ TDVAARG+DI + VIN P Sbjct 370 ------YDAMAIHGDKEQRQREFILARFRKDPRLCLVATDVAARGLDIKQLETVINYDFP 423 Query 594 DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + +YVHRIGR GRA G + L+ ++ ++ V + + W Sbjct 424 MQIDDYVHRIGRTGRAGGEGRCVYLITKKEAQITPSVLKELIGILERAQQEIPDWMIEWN 483 Query 654 NEMQLLS 660 + Sbjct 484 AQQPRYQ 490 Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 6/113 (5%) Query 1 MAAFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 M++F + V P + + + ++ PT +QA+S P++L G D++ A+TGSGKT F + Sbjct 99 MSSFDHLCGIVPPYLLKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMV 158 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 P + + Q+ + G + + + + G C Sbjct 159 PALAHI----AVQEPLRSGDGPMVVVLAPTRELAQQIEEETKKVIPGDVYCGC 207 >sp|Q0CMM8|DBP10_ASPTN ATP-dependent RNA helicase dbp10 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp10 PE=3 SV=1 Length=928 Score = 305 bits (781), Expect = 5e-90, Method: Composition-based stats. Identities = 118/501 (24%), Positives = 189/501 (38%), Gaps = 47/501 (9%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF------------VALSKAPDGYIVKS 269 +K F A L LK + F P V +++ G Sbjct 85 VKKGGGFQAMGLNANLLK-AITRKGFSVPTPIQRKTIPVIMDDRDVVGMARTGSGKTAAF 143 Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 ++ A + LI+ PSRELA QTL +K+ K L+ +L++GG + Sbjct 144 VIPMIEKLKSHSSKFGA-RGLILSPSRELALQTLKVVKELGK---GTDLKSVLLVGGDSL 199 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 +Q ++ DIV+ TPGR L L+LS +R++V DEAD L G++ + + + Sbjct 200 EEQFGMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILH 259 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 +P Q ++ SATL V+ + + PT + L E + + + V Sbjct 260 GLPTT------RQTLLFSATLPKSLVE-FARAGLQEPTLIRLDTESKISPDLQNAFFSVK 312 Query 450 PKTDR-----LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + K +V + + S+ K + + AV + Sbjct 313 SADKEGALLYILHEVIKMPTGPTEVAQRLQEEKANSKDSKNSKKRKRSEMDKAVNMKESP 372 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 I+F TK D L + G F+ +G RK + F+ G Sbjct 373 TKHSTIVFAATKHHVDYLYSLLREAG---------FAVSYAYGSLDQTARKIQVNNFRTG 423 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TDVAARGIDI + VIN P + + +VHR+GR RA R G + SLV Sbjct 424 LSNILVVTDVAARGIDIPILANVINYDFPSQPKIFVHRVGRTARAGRKGWSYSLVRDADA 483 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 + G+ R E G + ++ + + L V + D F Sbjct 484 PYLLDLQLFLGRRLVLGR--EHGDQVDYAEDVVVGGFPRDSLAQNCEWVTRVLDDNRDIF 541 Query 685 -------DGKVTYGQKRAAGG 698 G+ Y + R A Sbjct 542 SQRTVATKGEKLYMRTRNAAS 562 Score = 101 bits (251), Expect = 9e-21, Method: Composition-based stats. Identities = 28/104 (27%), Positives = 45/104 (43%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 91 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMDDRDVVGMARTGSGKTAAFVIPMIEK 150 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + S + + G+D Sbjct 151 LKSHSSKF-------GARGLILSPSRELALQTLKVVKELGKGTD 187 >sp|C4LB49|RHLB_TOLAT ATP-dependent RNA helicase RhlB OS=Tolumonas auensis (strain DSM 9187 / TA4) OX=595494 GN=rhlB PE=3 SV=1 Length=425 Score = 291 bits (745), Expect = 5e-90, Method: Composition-based stats. Identities = 102/428 (24%), Positives = 172/428 (40%), Gaps = 69/428 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +LGL ++ ++ + ++ + ++ G + Sbjct 11 FAELGLEPQVLAGVEAKGFHNCTPIQAETIPLLL--------TGKNIAGQAQTGTGKTIA 62 Query 269 SQHSG-NAQVTQT---KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 N +T + + N P+ LI+ P+RELA Q N+ + + L Sbjct 63 FLAGTFNYLLTHSASAERRQNQPRVLIMAPTRELAVQIYNDAVPMSESCG---FKMGLAY 119 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG QL+VL+ GVD+++GT GR+ D + G ++L ++ +VLDEAD + G+ I Sbjct 120 GGDGYDKQLAVLQEGVDLLIGTTGRIIDYLKQGIIDLGAIQVVVLDEADRMFDLGFIKDI 179 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + ++P + ++ SATL S V++L+ + M+ P + ++ E + Sbjct 180 RFLFRRMP----PPAQRLNMLFSATL-SLRVQELAYEHMNEPQHIQIEPEQMTGQRIK-- 232 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 E K + ++E Sbjct 233 --------------------------------------EELFYPSNEDKMLLLLTLMEED 254 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 ++AIIF TK C+++ + G L GD +R + LE F G Sbjct 255 WPEKAIIFANTKHGCEDVHAWLQADG---------HRVGLLTGDVPQKKRLKILEDFTAG 305 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA R G AIS + Sbjct 306 LLDVLVATDVAARGLHIPDVSHVFNYDLPDDAEDYVHRIGRTGRAGRSGHAISFACEDYA 365 Query 625 KVWYHVCS 632 + Sbjct 366 FNLPEIEE 373 Score = 104 bits (259), Expect = 2e-22, Method: Composition-based stats. Identities = 59/352 (17%), Positives = 117/352 (33%), Gaps = 56/352 (16%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F+E+G+ P++ VE + T IQAE+IPL+L G ++ A+TG+GKT AF Sbjct 10 TFAELGLEPQVLAGVEAKGFHNCTPIQAETIPLLLTGKNIAGQAQTGTGKTIAFLAGTFN 69 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 + + ++ + + + Y+ + + E G Sbjct 70 YLLTHSASAE--RRQNQPRVLIMAPTRELAVQIYN--------------DAVPMSESCGF 113 Query 123 RATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNY 182 + + +++ +G+ L +GT G + + Sbjct 114 KMGLAYGGDGYDKQLAVLQEGV----------DLLIGTT-------GRIIDYLKQGIIDL 156 Query 183 GEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEI---PPHMKNQALFPACVLKNAEL 238 G I + +D+ F KD+ F P N L+ EL Sbjct 157 GA-------IQVVV-LDEADRMFDLGFIKDIRFLFRRMPPPAQRLNMLFSATLSLRVQEL 208 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 + E + + + + S + KA+I ++ Sbjct 209 AYEHMNEPQHIQIEPEQMTGQRIKEELFYPSNEDKMLLLLTLMEEDWPEKAIIFANTK-- 266 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + ++ R L+ G V + +L +LE+ +D++V T Sbjct 267 -----HGCEDVHAWLQADGHRVGLLTGDVPQKKRLKILEDFTAGLLDVLVAT 313 >sp|A3LQW7|DBP2_PICST ATP-dependent RNA helicase DBP2 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP2 PE=3 SV=1 Length=530 Score = 295 bits (754), Expect = 6e-90, Method: Composition-based stats. Identities = 99/389 (25%), Positives = 156/389 (40%), Gaps = 67/389 (17%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K Q ++ V ++ G + + Sbjct 108 VLNEVKAQGFPSPTAIQCQGWPMALS--------GRDMVGIAATGSGKTLSYCLPAIVHI 159 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q K+ + ++R + GG Q+ Sbjct 160 NAQPLLSPGDGPVVLVLAPTRELAVQIQQEC---SKFGSSSRIRNTCVYGGAPKGQQIRD 216 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L GV+IV+ TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 217 LARGVEIVIATPGRLIDMLEMGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI---- 272 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +V+ L+ + P V + E + T+ VV Sbjct 273 --RPDRQTLMWSATWPK-EVQNLARDYLQDPIQVRIGSLELAASHTITQVV--------- 320 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ SE K + + K + +IF Sbjct 321 ----------------------------EVISEYEKRDRLVKHLETATTEKESKVLIFAS 352 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK CD + Y G + + +HGD++ ER L FK G ++ TDV Sbjct 353 TKKTCDEVTSYLRADG---------WPALAIHGDKQQSERDWVLREFKTGKSPIMVATDV 403 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRI 603 AARGID+ G+ +VIN +P ++YVHRI Sbjct 404 AARGIDVKGINFVINFDMPGNIEDYVHRI 432 Score = 97.5 bits (241), Expect = 6e-20, Method: Composition-based stats. Identities = 26/106 (25%), Positives = 42/106 (40%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E G + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 96 ITTFDEAGFPEYVLNEVKAQGFPSPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPA 155 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G + + + + S F S Sbjct 156 IVHI----NAQPLLSPGDGPVVLVLAPTRELAVQIQQECSKFGSSS 197 >sp|Q9SZB4|RH43_ARATH Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana OX=3702 GN=RH43 PE=3 SV=1 Length=542 Score = 295 bits (755), Expect = 6e-90, Method: Composition-based stats. Identities = 117/511 (23%), Positives = 200/511 (39%), Gaps = 77/511 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 KN D+ + +K++ + ++ L + ++ G Sbjct 97 KNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLS--------GRDMIGIAFTGSGKT 148 Query 267 VKSQHSGNAQVTQTKFLPN-----APKALIVEPSRELAEQTLNNIKQFKKYI---DNPKL 318 + Q + + P AL++ PSRELA+QT + ++QF + P+L Sbjct 149 LVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRL 208 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 R LL IGGV R QL V++ GV IVV TPGRL D+++ K++L R L LDEAD L+ Sbjct 209 RSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVDL 268 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 G+ D I + + + Q ++ SAT+ ++ + + P V++ + Sbjct 269 GFEDDIRHVFDHF------KSQRQTLLFSATMP-AKIQIFATSALVKPVTVNVGRAGAAN 321 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 V V V + K Y + Sbjct 322 LDVIQEVEYVKQEA----------------------------------------KIVYLL 341 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 +++ +IFC K D D++ +Y + +G V +HG + +R + Sbjct 342 ECLQKTTP-PVLIFCENKADVDDIHEYLLLKG---------VEAVAIHGGKDQEDRDYAI 391 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 FK G L+ TDVA++G+D + +VIN +P E +NYVHRIGR GR + G+A + Sbjct 392 SLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTF 451 Query 619 VATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI--SQVEPD 676 + + ++ + E + ++ C Sbjct 452 INKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANASGVKGCAYCGGLGHRI 511 Query 677 IKVPVDEFDGKV--TYGQKRAAGGGSYKGHV 705 ++ P E V + +K G Y+G V Sbjct 512 LQCPKFEHQKSVAISSSRKDHFGSDGYRGEV 542 Score = 94.8 bits (234), Expect = 5e-19, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 18/148 (12%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F +M + + +++ + PT IQ + +P++L G D++ A TGSGKT F +P+ Sbjct 96 IKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPM 155 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDG---------LCC 111 I + + G+ I + YD F LC Sbjct 156 IILALQEE-IMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSLLCI 214 Query 112 Q--------SREVKEWHGCRATKGLMKG 131 K H AT G +K Sbjct 215 GGVDMRSQLDVVKKGVHIVVATPGRLKD 242 >sp|Q6CSZ7|DHH1_KLULA ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DHH1 PE=3 SV=1 Length=514 Score = 294 bits (752), Expect = 7e-90, Method: Composition-based stats. Identities = 113/479 (24%), Positives = 187/479 (39%), Gaps = 88/479 (18%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 ++ +D L E+ + ++ + G L++A +G Sbjct 36 RSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVA----------IAGKDILARAKNG-T 84 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 K+ + + K N +ALI+ P+RELA QT ++ K+ + ++ GG Sbjct 85 GKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCG---ISCMVTTGG 141 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 RD + L V I+VGTPGR+ DL S +LS+ ++DEAD +LS+ + + Sbjct 142 TNLRDDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKMLSRDFKVLAEQ 201 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + +P +R Q+++ SAT VK+ K + P ++L E ++ + Sbjct 202 ILGFLP------ERRQLLLFSATFP-VTVKEFMVKHLKNPHEINLMDELTLK-GISQFYA 253 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 V K K + ++ Sbjct 254 FVEEKQ----------------------------------------KLHCLNTLFSKLQI 273 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +QAIIFC + + L + + G FSC H K ER + F++G V Sbjct 274 NQAIIFCNSTNRVELLAKKITELG---------FSCYYSHARMKQSERNKVFHEFRQGKV 324 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ Sbjct 325 RTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFN 384 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 Y + NT + + S+I++ L I P++ Sbjct 385 LYKIEQEL-----NTEI------------APIPSQIDKSLYVAEDSSAVPIPFPLESLP 426 Score = 99.0 bits (245), Expect = 2e-20, Method: Composition-based stats. Identities = 24/93 (26%), Positives = 41/93 (44%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F + + E+ + E + P+ IQ E+IP+ + G D+L A+ G+GKT AF IP + Sbjct 36 RSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTL 95 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + V L Q + + Sbjct 96 EKVKPKLNKIQ---------ALIMVPTRELALQ 119 >sp|A1CJ18|DHH1_ASPCL ATP-dependent RNA helicase dhh1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dhh1 PE=3 SV=1 Length=503 Score = 293 bits (751), Expect = 7e-90, Method: Composition-based stats. Identities = 115/479 (24%), Positives = 180/479 (38%), Gaps = 70/479 (15%) Query 213 GLAFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 GL FE +F A K + + +EE G L++A +G K+ Sbjct 46 GLEFEDFYIKRELMMGIFEAGFEKPSPI-----QEETIPVALTGRDILARAKNG-TGKTA 99 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + +ALI+ P+RELA QT K K++ + ++ GG Sbjct 100 AFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLG---INVMVTTGGTGLM 156 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L + V I+VGTPGR+ DL S G +LS+ V+DEAD LLS ++ I ++ + Sbjct 157 DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSF 216 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 P K QV++ SAT VK +K M P ++L ++ + V Sbjct 217 HP------KDRQVMLFSATFP-LIVKSFKDKHMRNPYEINLM-DELTLRGITQYYAFVEE 268 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K K + +++Q+I Sbjct 269 KQ----------------------------------------KVHCLNTLFSKLQINQSI 288 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC H R + F+ G R L+ Sbjct 289 IFCNSTNRVELLAKKITELG---------YSCFYSHARMLQQHRNRVFHDFRNGVCRNLV 339 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ E Y + Sbjct 340 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWEDRFNLYKI 399 Query 631 CSSRGKGCYNT--RLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 G + + + L V + + G+ Sbjct 400 EQELGTEIQPIPQNIDKKLYVYDSPETIPRPISNPPQLRQATQSVTAERRHQNHANSGQ 458 Score = 97.5 bits (241), Expect = 6e-20, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + K T + + Sbjct 109 I---------NPKSTKTQALILVPTRELALQ 130 >sp|Q6BRN4|IF4A_DEBHA ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=TIF1 PE=3 SV=1 Length=397 Score = 290 bits (742), Expect = 7e-90, Method: Composition-based stats. Identities = 109/427 (26%), Positives = 183/427 (43%), Gaps = 71/427 (17%) Query 227 LFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVT 278 F LK ++ F +G E + + +++ D +G + + Sbjct 24 TFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQ 83 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + + +ALI+ P+RELA Q N I Y++ + IGG + +D + ++ Sbjct 84 RIDENEKSTQALILAPTRELALQIQNVITHIGLYLN---VTVHASIGGTSMKDDIEAFKS 140 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 GV IVVGTPGR+ D++ +V+ +LDEAD +LS G+ + I + +P+ T Sbjct 141 GVQIVVGTPGRVFDMIERRFFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETT--- 197 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 QV++ SAT+ DV +++ K M+ P + +K ++ + + + V + Sbjct 198 ---QVVLLSATMP-QDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVEQED------ 247 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K + + QA+IFC T+ Sbjct 248 ---------------------------------YKFDCLCDLYDSISVTQAVIFCNTRSK 274 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 + L KG F+ +H D +R + F+ G R LI TD+ ARG Sbjct 275 VEFLTTKL---------KGENFTVSAIHADLPQADRDTIMNEFRSGSSRILISTDLLARG 325 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID+ V VIN LP K+NY+HRIGR GR R G+AI+ V + + + Sbjct 326 IDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDQDVGMMREIEK-----F 380 Query 639 YNTRLKE 645 Y+T+++E Sbjct 381 YSTQIEE 387 Score = 95.2 bits (235), Expect = 2e-19, Method: Composition-based stats. Identities = 23/102 (23%), Positives = 43/102 (42%), Gaps = 9/102 (9%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 24 TFDDLNLKPNIVRGIFGYGYESPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQ 83 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + E K Q + + + + + + Sbjct 84 RIDENEKSTQ---------ALILAPTRELALQIQNVITHIGL 116 >sp|A2QY39|DHH1_ASPNC ATP-dependent RNA helicase dhh1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dhh1 PE=3 SV=1 Length=505 Score = 293 bits (751), Expect = 8e-90, Method: Composition-based stats. Identities = 112/425 (26%), Positives = 172/425 (40%), Gaps = 68/425 (16%) Query 213 GLAFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 GL FE +F A K + + +EE G L++A +G K+ Sbjct 46 GLEFEDFYIKRELMMGIFEAGFEKPSPI-----QEETIPVALTGRDILARAKNG-TGKTA 99 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + +ALI+ P+RELA QT + K K++ + ++ GG Sbjct 100 AFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLG---INVMVTTGGTGLM 156 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L + V I+VGTPGR+ DL S G +LS+ V+DEAD LLS ++ I ++ + Sbjct 157 DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSF 216 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 P K QV++ SAT VK +K M P ++L ++ + V Sbjct 217 HP------KDRQVMLFSATFP-LIVKSFKDKHMRNPYEINLM-DELTLRGITQYYAFVEE 268 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K K + +++Q+I Sbjct 269 KQ----------------------------------------KVHCLNTLFSKLQINQSI 288 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC H R + F+ G R L+ Sbjct 289 IFCNSTNRVELLAKKITELG---------YSCFYSHARMLQQHRNRVFHDFRNGVCRNLV 339 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ E Y + Sbjct 340 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWEDRFNLYKI 399 Query 631 CSSRG 635 G Sbjct 400 EQELG 404 Score = 97.9 bits (242), Expect = 4e-20, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + K T + + Sbjct 109 I---------NPKSTKTQALILVPTRELALQ 130 >sp|P0CQ79|DBP3_CRYNB ATP-dependent RNA helicase DBP3 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP3 PE=3 SV=1 Length=605 Score = 297 bits (759), Expect = 8e-90, Method: Composition-based stats. Identities = 108/434 (25%), Positives = 175/434 (40%), Gaps = 71/434 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL----------PNAPKALIVEPSR 296 K V +++ G + G ++Q + P + L++ P+R Sbjct 205 PALLSKKDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTR 264 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-ENGVDIVVGTPGRLDDLVS 355 ELA+Q+ + + + L+ + I GGV Q L + +VVGTPGR DL Sbjct 265 ELAQQSHEH---LSAFGEQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLAD 321 Query 356 TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV 415 +G+L+LS V +LVLDEAD +L G+ + I R+ P + Q ++ SAT V Sbjct 322 SGELDLSSVSYLVLDEADRMLDAGFENDIRRIIAHTP---GHKEGRQTVMFSATWP-ESV 377 Query 416 KKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 ++L+ ++ P + + ++ S + +V ++ D+ + Sbjct 378 RRLASTFLNNPLRITVGSDELSANKRIEQIVEVLDNPRDKDF------------------ 419 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 LK V + + ++F K + LE + G Sbjct 420 ------------RLTHHLKAHLKVHPNSKTSPTRILVFALYKKEAQRLEYTIRRAG---- 463 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 ++ LHGD R + LE FK G L+ TDVAARG+DI V VINVT P Sbjct 464 -----YAVGALHGDMTQEARFKALEAFKTGQQNVLVATDVAARGLDIPDVGLVINVTFPL 518 Query 595 EKQNYVHRIGRVGRAERMGLAISLVATEK-------------EKVWYHVCSSRGKGCYNT 641 +++VHR GR GRA + G A++ E V + + Sbjct 519 TTEDFVHRCGRTGRAGKTGKAVTFFTGENHEKSLAGEFMRVLRDVGAEIPKEMDRFPTTI 578 Query 642 RLKEDGGCTIWYNE 655 + KE G +Y E Sbjct 579 KKKEHGSYGAFYKE 592 Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 29/108 (27%), Positives = 48/108 (44%), Gaps = 8/108 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + ++ + ++ + + + PT IQA S P +L DV+ AETGSGKT AF +P Sbjct 174 LLSIRDLPINSKLQPFLNK--FEKPTPIQACSWPALLSKKDVVGIAETGSGKTLAFGVPG 231 Query 61 IQIVYETLKDQQEGKKGKTTIKTGAS-----VLNKWQMNPYDRGSAFA 103 I + L KKG+ + + ++ SAF Sbjct 232 IN-LLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQSHEHLSAFG 278 >sp|Q9NXZ2|DDX43_HUMAN Probable ATP-dependent RNA helicase DDX43 OS=Homo sapiens OX=9606 GN=DDX43 PE=1 SV=2 Length=648 Score = 298 bits (762), Expect = 8e-90, Method: Composition-based stats. Identities = 111/474 (23%), Positives = 181/474 (38%), Gaps = 76/474 (16%) Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVA 257 I F + E+ ++K +++ + Sbjct 236 IPNPTCTFDDAFQCYP---EVMENIKKAGFQKPTPIQSQAWPIVL--------QGIDLIG 284 Query 258 LSKAPDGYIVKSQHSGNAQVTQ---TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYID 314 +++ G + G + K N P L++ P+RELA Q ++ Sbjct 285 VAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYS---- 340 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 LR + + GG +Q+ L+ GVDI++ TPGRL+DL + +NL + +LVLDEAD Sbjct 341 YKGLRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADK 400 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 +L G+ I ++ Q ++ SAT V +L++ + P V + Sbjct 401 MLDMGFEPQIMKIL------LDVRPDRQTVMTSATWP-HSVHRLAQSYLKEPMIVYVGTL 453 Query 435 DSV-PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 D V +V ++ + E WS L+ Sbjct 454 DLVAVSSVKQNIIVTTEE-------------------------------EKWSHMQTFLQ 482 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 D+ I+F K D+L I S LHGDR+ + Sbjct 483 S--------MSSTDKVIVFVSRKAVADHLSSDLIL---------GNISVESLHGDREQRD 525 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R++ LE FK G VR LI TD+A+RG+D+H V +V N P + YVHRIGR GRA R G Sbjct 526 REKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTG 585 Query 614 LAISLVATEKEKVWYHVCS--SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 ++I+ + +V + + R L + + + + E Sbjct 586 VSITTLTRNDWRVASELINILERANQSIPEELVSMAERFKAHQQKREMERKMER 639 Score = 91.7 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 23/111 (21%), Positives = 50/111 (45%), Gaps = 6/111 (5%) Query 3 AFSE-MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP-V 60 F + PE+ + +++ + PT IQ+++ P++L G D++ A+TG+GKT + +P Sbjct 242 TFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGF 301 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 I +V + Q + G + + + + ++ C Sbjct 302 IHLVLQPSLKGQRNRPGMLVL----TPTRELALQVEGECCKYSYKGLRSVC 348 >sp|Q7S9J4|DBP10_NEUCR ATP-dependent RNA helicase dbp-10 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-10 PE=3 SV=1 Length=934 Score = 305 bits (780), Expect = 8e-90, Method: Composition-based stats. Identities = 115/509 (23%), Positives = 197/509 (39%), Gaps = 39/509 (8%) Query 220 PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ 279 +K F A L L+ + F P A+ + V + T Sbjct 93 KSVKKGGGFQAMGLNAHLLR-AITRKGFSVPTPIQRKAIPLILERKDVVGMARTGSGKTA 151 Query 280 TKFLP-------NAPK----ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 +P ++P+ ALI+ PSRELA QTL +K+ + L+ +L++GG + Sbjct 152 AFVIPMIERLKGHSPRVGSRALIMSPSRELALQTLKVVKELGR---GTDLKTVLLVGGDS 208 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 +Q ++ + DI++ TPGR L L+L+ ++++V DEAD L G++ + + Sbjct 209 LEEQFGMMASNPDIIIATPGRFLHLKVEMNLSLASIKYVVFDEADRLFEMGFATELTEIL 268 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + +P Q ++ SATL S V+ + + P+ V L E V + V Sbjct 269 HALP------PSRQTLLFSATLPSSLVE-FARAGLQEPSLVRLDAETKVSPDLESAFFAV 321 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + E+ G DV P E + K EY ++ Sbjct 322 -----KGGEKEGALLHLLHDVIKVPLGPPEGTKEESDELQARKRKREYRPNPKEKPTEYS 376 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 IIF TK + + G F+ ++G R ++ F++G Sbjct 377 TIIFTATKHHVEYIANLLKLAG---------FAVSYVYGSLDQTARLIQVDNFRRGRTHI 427 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARGID+ + VIN P + + +VHR+GR RA + G A LV Sbjct 428 LVVTDVAARGIDMPALANVINYDFPSQPKIFVHRVGRTARAGQRGWAYGLVRQSDVPYLL 487 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKV 688 + G+ + D + ++ + + + ++ I VE +K D K Sbjct 488 DLQLFLGRKLI---IGHDQKNPSFAADVVVGTLKRDGVDVNIEWVEKALKESADLKALKG 544 Query 689 TYGQKRAAGGGSYKGHVDILAPTVQELAA 717 + + A +E+ Sbjct 545 VAAKAEKLYMKTRNSASSQSAKRAREVTQ 573 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 30/104 (29%), Positives = 46/104 (44%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IPLIL DV+ A TGSGKT AF IP+I+ Sbjct 101 FQAMGLNAHLLRAITRKGFSVPTPIQRKAIPLILERKDVVGMARTGSGKTAAFVIPMIER 160 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + S + + G+D Sbjct 161 LKGHSPRV-------GSRALIMSPSRELALQTLKVVKELGRGTD 197 >sp|Q0E3X4|RH35A_ORYSJ DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0150100 PE=2 SV=2 Length=627 Score = 297 bits (760), Expect = 9e-90, Method: Composition-based stats. Identities = 103/379 (27%), Positives = 166/379 (44%), Gaps = 60/379 (16%) Query 286 APKALIVEPSRELAEQTLNNIKQFK---KYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 P +I+ PSRELA+QT + I+QF K P++R LL IGGV R QL V++ GV I Sbjct 258 GPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHI 317 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 VV TPGRL DL++ K+NL R+L LDEAD L+ G+ D I + + + Q Sbjct 318 VVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHF------KAQRQ 371 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SAT+ ++ ++ + P V++ + V V V + Sbjct 372 TLLFSATMPK-KIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARII------- 423 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 Y + +++ ++FC K D D + Sbjct 424 ---------------------------------YLLECLQKTPP-PVLVFCENKADVDYI 449 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 +Y + +G V +HG + ER+ +E FK G L+ TDVA++G+D Sbjct 450 HEYLLLKG---------VEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGLDFP 500 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 + +VIN +P E +NYVHRIGR GR + G+A + + + + K Sbjct 501 DIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAKQRI 560 Query 643 LKEDGGCTIWYNEMQLLSE 661 + + +++ Sbjct 561 PPVLAELNDPLEDEETMAK 579 Score = 92.5 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 1/99 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + + E + PT IQ + +P++L G D++ A TGSGKT F +P+I + Sbjct 184 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 243 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + G+ + YD F Sbjct 244 ALQEEM-MMPIVPGEGPFGMIICPSRELAKQTYDVIEQF 281 >sp|Q5AWA6|DBP3_EMENI ATP-dependent RNA helicase dbp3 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp3 PE=3 SV=2 Length=488 Score = 293 bits (749), Expect = 9e-90, Method: Composition-based stats. Identities = 110/418 (26%), Positives = 174/418 (42%), Gaps = 74/418 (18%) Query 225 QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP 284 +++A F + +++ G + +V K Sbjct 91 DGFASPTAIQSATWPLLFA--------GRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQ 142 Query 285 NA--PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 + P A+++ P+RELA Q + Q K+ + ++ I GGV +Q L++ + Sbjct 143 KSCRPLAVVISPTRELAMQIYD---QLVKFAEKVDIQVACIFGGVKKDEQREALKSAA-V 198 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 VV TPGRL DL + G L+L +V++LVLDEAD +L +G+ I + + +P + Q Sbjct 199 VVATPGRLKDLQNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPMPV-----SKRQ 253 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV----PDTVHHVVVPVNP--KTDRLW 456 ++ +AT V+ L+ M P V + G+ S + VV V P K RL Sbjct 254 TVMFTATWPPI-VRNLASTFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLV 312 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 + L + + D+ + FC K Sbjct 313 QILNRH---------------------------------------QRGTPDKVLAFCLYK 333 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + +E+ +G F +HGD ER ++LE FK G L+ TDVAA Sbjct 334 KEAMRVERLLRTKG---------FKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAA 384 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 RG+DI V V+NVT P ++YVHRIGR GRA G AI+L + + + Sbjct 385 RGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGALINVL 442 Score = 100 bits (249), Expect = 6e-21, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 14/121 (12%) Query 21 DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTT 80 + PT IQ+ + PL+ G DV+ AETGSGKT AF +P ++ V + LK +Q+ + Sbjct 92 GFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLD-LKTKQKSCRPLAV 150 Query 81 IKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC---------QSREVKEWHGCRATKGLMK 130 + S + M YD+ FA D + C Q +K AT G +K Sbjct 151 V---ISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQREALKSAAVVVATPGRLK 207 Query 131 G 131 Sbjct 208 D 208 >sp|B6EPA4|RHLB_ALISL ATP-dependent RNA helicase RhlB OS=Aliivibrio salmonicida (strain LFI1238) OX=316275 GN=rhlB PE=3 SV=1 Length=434 Score = 291 bits (745), Expect = 9e-90, Method: Composition-based stats. Identities = 120/510 (24%), Positives = 199/510 (39%), Gaps = 91/510 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDGY 265 DLGL ++ + + ++ L ++ + G +A A + Sbjct 11 FADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLAATFNH 70 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 ++ + ++TQ P+A+I+ P+RELA Q N+ + I + L+ L G Sbjct 71 LLTTPAPEGRKITQ-------PRAIIMAPTRELAIQIYNDAESL---IASTGLKAALAYG 120 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G Q V+E GVDI++GT GR+ D G+++ ++ +VLDEAD + G+ I Sbjct 121 GERYEKQQKVIEAGVDILIGTTGRIIDFYKQGQIDFKAIQVVVLDEADRMFDLGFIKDIR 180 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-HHV 444 + ++P ++ SATL S+ V++L+ + M P V ++ + + + Sbjct 181 FVFRRMPAPA----ERLNMLFSATL-SYRVQELAFEHMQEPEHVVVEPDQKTGHLITEEL 235 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 P N L + L I+E Sbjct 236 FYPSNDHKMALLQTL-----------------------------------------IEEE 254 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 D+AIIF TK C+ + + + L GD +R++ LE F KG Sbjct 255 WPDRAIIFANTKHKCELVWGHL---------AADKHRVGLLTGDVPQKKRERILEEFTKG 305 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 +V L+ TDVAARG+ I V +V N LP+E ++YVHRIGR GRA G +IS E Sbjct 306 EVDILVATDVAARGLHIPQVTHVFNFDLPNEAEDYVHRIGRTGRAGESGNSISFACEEYA 365 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 + E Y+ LL ++ + Q P Sbjct 366 INLPAIEE----------YIEHSIPQSDYDTSALLEDLPAPIRL---QRRPPQNRRNGSN 412 Query 685 DGKVTYGQKRAAGGGSYKGHVDILAPTVQE 714 +G+ G ++ H P + Sbjct 413 NGQRQSGNRK---------HSRPRPPRSPQ 433 Score = 107 bits (268), Expect = 1e-23, Method: Composition-based stats. Identities = 61/360 (17%), Positives = 123/360 (34%), Gaps = 74/360 (21%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++G+ P++ + ++ T IQA+++P++L G D+ A+TG+GKT AF Sbjct 11 FADLGLEPQVLDGLNAKGFINCTPIQAKALPVLLAGQDIAGQAQTGTGKTLAFLAATFNH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + T EG+K + + + Y+ + + G + Sbjct 71 LLTTPAP--EGRKITQPRAIIMAPTRELAIQIYN--------------DAESLIASTGLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 A ++ + + G+ + +GT G + + + Sbjct 115 AALAYGGERYEKQQKVIEAGV----------DILIGTT-------GRIIDFYKQGQID-- 155 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAELK 239 F + +D+ F KD+ F P N + EL Sbjct 156 --FKAIQVVV----LDEADRMFDLGFIKDIRFVFRRMPAPAERLNMLFSATLSYRVQELA 209 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ---HSGNAQVTQTKFLPNAP---KALIVE 293 F +E + G+++ + S + ++ + L +A+I Sbjct 210 FEHMQEPEHVVVE------PDQKTGHLITEELFYPSNDHKMALLQTLIEEEWPDRAIIFA 263 Query 294 PSR---ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ EL ++ K R L+ G V + + +LE VDI+V T Sbjct 264 NTKHKCELVW----------GHLAADKHRVGLLTGDVPQKKRERILEEFTKGEVDILVAT 313 >sp|Q0JM17|RH56_ORYSJ DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP1 PE=1 SV=2 Length=432 Score = 291 bits (744), Expect = 1e-89, Method: Composition-based stats. Identities = 98/382 (26%), Positives = 164/382 (43%), Gaps = 58/382 (15%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G + +A G K+ + + Q + AL++ +RELA Q + ++F KY+ Sbjct 88 GMDVICQAKSGM-GKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYL 146 Query 314 DNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P+++ + GGV + +L+N IVVGTPGR+ L L+L VR +LDE Sbjct 147 --PEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDEC 204 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L S + R +I ++T K QV++ SATL S +++ + +K M P + + Sbjct 205 DKMLD---SLDMRRDVQEIFKMTPHDK--QVMMFSATL-SKEIRPVCKKFMQDPMEIYV- 257 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 +D T+H +V + + + + Sbjct 258 -DDEAKLTLHGLV-------------------------------------QHYIKLSEAE 279 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + +Q +IF ++ L + + F + +H Sbjct 280 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCE---------CNFPAISIHSGMTQE 330 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER + FK+G R L+ TD+ RGIDI V VIN +PD +Y+HR+GR GR Sbjct 331 ERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTK 390 Query 613 GLAISLVATEKEKVWYHVCSSR 634 GLAI+ V++ + + R Sbjct 391 GLAITFVSSASDSDVLNQVQER 412 Score = 80.9 bits (198), Expect = 9e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+++ + P+++Q E IP + G DV+ A++G GKT F + + Sbjct 51 SGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSL 110 Query 62 QIV 64 Q + Sbjct 111 QQI 113 >sp|Q0CBE1|DHH1_ASPTN ATP-dependent RNA helicase dhh1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dhh1 PE=3 SV=1 Length=509 Score = 293 bits (751), Expect = 1e-89, Method: Composition-based stats. Identities = 111/425 (26%), Positives = 172/425 (40%), Gaps = 68/425 (16%) Query 213 GLAFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 GL FE +F A K + + +EE G L++A +G K+ Sbjct 46 GLEFEDFYIKRELMMGIFEAGFEKPSPI-----QEETIPVALTGRDILARAKNG-TGKTA 99 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + +ALI+ P+RELA QT + K K++ + ++ GG Sbjct 100 AFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLG---INVMVTTGGTGLM 156 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L + V I+VGTPGR+ DL S G +LS+ V+DEAD LLS ++ I ++ + Sbjct 157 DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSF 216 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 P K QV++ SAT VK +K M P ++L ++ + V Sbjct 217 HP------KDRQVMLFSATFP-LIVKSFKDKHMRNPYEINLM-DELTLRGITQYYAFVEE 268 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K K + +++Q+I Sbjct 269 KQ----------------------------------------KVHCLNTLFSKLQINQSI 288 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC H R + F+ G R L+ Sbjct 289 IFCNSTNRVELLAKKITELG---------YSCFYSHARMLQQHRNRVFHDFRNGVCRNLV 339 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Y + Sbjct 340 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKI 399 Query 631 CSSRG 635 G Sbjct 400 EQELG 404 Score = 97.9 bits (242), Expect = 4e-20, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + K T + + Sbjct 109 I---------NPKSTKTQALILVPTRELALQ 130 >sp|P0CQ78|DBP3_CRYNJ ATP-dependent RNA helicase DBP3 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP3 PE=3 SV=1 Length=605 Score = 296 bits (758), Expect = 1e-89, Method: Composition-based stats. Identities = 109/434 (25%), Positives = 176/434 (41%), Gaps = 71/434 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL----------PNAPKALIVEPSR 296 K V +++ G + G ++Q + P + L++ P+R Sbjct 205 PALLSKKDVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTR 264 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-ENGVDIVVGTPGRLDDLVS 355 ELA+Q+ ++ F + L+ + I GGV Q L + +VVGTPGR DL Sbjct 265 ELAQQSHEHLSAFG---EQVGLKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLAD 321 Query 356 TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV 415 +G+L+LS V +LVLDEAD +L G+ + I R+ P + Q ++ SAT V Sbjct 322 SGELDLSSVSYLVLDEADRMLDAGFENDIRRIIAHTP---GHKEGRQTVMFSATWP-ESV 377 Query 416 KKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 ++L+ ++ P + + ++ S + +V ++ D+ + Sbjct 378 RRLASTFLNNPLRITVGSDELSANKRIEQIVEVLDNPRDKDF------------------ 419 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 LK V + + ++F K + LE + G Sbjct 420 ------------RLTHHLKAHLKVHPNSKTSPTRILVFALYKKEAQRLEYTIRRAG---- 463 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 ++ LHGD R + LE FK G L+ TDVAARG+DI V VINVT P Sbjct 464 -----YAVGALHGDMTQEARFKALEAFKTGQQNVLVATDVAARGLDIPDVGLVINVTFPL 518 Query 595 EKQNYVHRIGRVGRAERMGLAISLVATEK-------------EKVWYHVCSSRGKGCYNT 641 +++VHR GR GRA + G A++ E V + + Sbjct 519 TTEDFVHRCGRTGRAGKTGKAVTFFTGENHEKSLAGEFMRVLRDVGAEIPKEMDRFPTTI 578 Query 642 RLKEDGGCTIWYNE 655 + KE G +Y E Sbjct 579 KKKEHGSYGAFYKE 592 Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 29/108 (27%), Positives = 48/108 (44%), Gaps = 8/108 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + ++ + ++ + + + PT IQA S P +L DV+ AETGSGKT AF +P Sbjct 174 LLSIRDLPINSKLQPFLNK--FEKPTPIQACSWPALLSKKDVVGIAETGSGKTLAFGVPG 231 Query 61 IQIVYETLKDQQEGKKGKTTIKTGAS-----VLNKWQMNPYDRGSAFA 103 I + L KKG+ + + ++ SAF Sbjct 232 IN-LLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQSHEHLSAFG 278 >sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=drs1 PE=3 SV=1 Length=754 Score = 300 bits (768), Expect = 1e-89, Method: Composition-based stats. Identities = 103/485 (21%), Positives = 184/485 (38%), Gaps = 68/485 (14%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 + + + L+ I + N +++ + V + G Sbjct 259 SSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLAL--------LGKDIVGAAVTGSGKT 310 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + LI+ P+RELA Q + + + D + L IGG Sbjct 311 AAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIASFTD---IMVCLCIGG 367 Query 327 VAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 ++ + Q L DIV+ TPGR +D + ++ + + +V+DEAD +L G++D +N Sbjct 368 LSLKLQEQELRKRPDIVIATPGRFIDHMRNSQGFTVENIEIMVMDEADRMLEDGFADELN 427 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + P K Q ++ SAT+ V L ++ P V + + + + Sbjct 428 EIIQACP------KSRQTMLFSATMTD-KVDDLIRLSLNRPVRVFVDNKKTTAKLLTQEF 480 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V V P+ + +L+ + KE Sbjct 481 VRVRPQRE-------------------------------------LLRPAMLIYLCKELF 503 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + IIF R+K + F + +HG +R + LE F+ G Sbjct 504 HRRTIIFFRSKAFAHKMRVIFGLL---------SLNATEIHGSLSQEQRVRALEDFRDGK 554 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +L+ TDVA+RGIDI G+ VIN P + Y+HR+GR RA R G AI+L K Sbjct 555 CNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVGRTARAGRSGRAITLAGEGDRK 614 Query 626 VWYHVCSSRGKGCYNTR-LKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 V V + NT+ + + + + E+E + + + + + ++ + E Sbjct 615 VLKGVF--KNSSAQNTKLVNRNLDFNKVEKFGKEIEELEPVVQKVLDEEKQERELKIAER 672 Query 685 DGKVT 689 D K Sbjct 673 DLKKG 677 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 6/110 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F M + I + + + + +PT IQ ++IPL L G D++ AA TGSGKT AF +P++ Sbjct 259 SSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPIL 318 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + + K K TT + M + + A +D + C Sbjct 319 ERLLYRPK------KVPTTRVLILCPTRELAMQCHSVATKIASFTDIMVC 362 >sp|A7ENE0|PRP5_SCLS1 Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=prp5 PE=3 SV=1 Length=1114 Score = 307 bits (787), Expect = 1e-89, Method: Composition-based stats. Identities = 108/482 (22%), Positives = 191/482 (40%), Gaps = 89/482 (18%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 GL + +K ++ + + ++K G + Sbjct 489 GLDVKSLDVIKKLGYDKPTSIQMQAIPAIMS--------GRDVIGVAKTGSGKTIAFLLP 540 Query 273 GNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + L N P LI+ P+RELA Q K F K + LR + GG + Sbjct 541 MFRHIRDQRPLKNSDGPIGLIMTPTRELATQIHKECKPFLKAMG---LRAVCAYGGAIIK 597 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 DQ++ L+ G +I+V TPGR+ +L++ NL +V ++VLDEAD + G+ + ++ Sbjct 598 DQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKV 657 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV- 446 N I Q I+ SAT+ + L++K + P + + G V + +V Sbjct 658 FNNI------RPNRQTILFSATMPRI-MDALAKKTLQSPVEIVVGGRSVVAPEITQIVEV 710 Query 447 -PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 K RL E LG+ + +D Sbjct 711 REEKEKFHRLLELLGELYNADEDA------------------------------------ 734 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + +IF + D+L + +++G + C+ +HG + +R ++ FK G Sbjct 735 --RTLIFVDRQEKADDLLKDLMRKG---------YPCMSIHGGKDQVDRDSTIDDFKAGV 783 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +I T VAARG+D+ + V+N P+ ++YVHR GR GRA G A++ + E+E+ Sbjct 784 VPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQ 843 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + + + + L+E+ + +V+ K F Sbjct 844 YSVGIAKALEQSGQEV--------------PERLNEMRKSYK---DKVKSGAKKESSGFG 886 Query 686 GK 687 GK Sbjct 887 GK 888 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 51/107 (48%), Gaps = 4/107 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ + ++++ + PT IQ ++IP I+ G DV+ A+TGSGKT AF +P+ Sbjct 482 VQKWSQCGLDVKSLDVIKKLGYDKPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPM 541 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + +DQ+ K I + + + F Sbjct 542 FRHI----RDQRPLKNSDGPIGLIMTPTRELATQIHKECKPFLKAMG 584 >sp|Q95YF3|CGH1_CAEEL ATP-dependent RNA helicase cgh-1 OS=Caenorhabditis elegans OX=6239 GN=cgh-1 PE=1 SV=1 Length=430 Score = 290 bits (743), Expect = 1e-89, Method: Composition-based stats. Identities = 105/411 (26%), Positives = 176/411 (43%), Gaps = 63/411 (15%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L++A +G K+ + + + A +A+++ P+RELA QT + K+I Sbjct 80 GQDILARAKNG-TGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHI 138 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 +L+ ++ GG RD + L V +V+ TPGR+ DL+ G + + LVLDEAD Sbjct 139 ---QLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEAD 195 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LLSQ + ++R+ N +P K QV++ SAT + V +K MH P ++L Sbjct 196 KLLSQDFQGILDRLINFLP------KERQVMLYSATFPNT-VTSFMQKHMHKPYEINLM- 247 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E+ V V K K Sbjct 248 EELTLLGVTQYYAFVQEKQ----------------------------------------K 267 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 ++ +++Q+IIFC + + L + + G +SC +H + Sbjct 268 VHCLNTLFRKLQINQSIIFCNSTQRVELLAKKITEIG---------YSCYYIHSKMAQNH 318 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F++G+ R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +G Sbjct 319 RNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLG 378 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 +AI+L+ E + + + ++ + QL+ +E Sbjct 379 VAINLITYEDRHTLRRIEQELRTRIEP--IPKTVDPKLYVADQQLVDAADE 427 Score = 90.6 bits (223), Expect = 7e-18, Method: Composition-based stats. Identities = 26/91 (29%), Positives = 41/91 (45%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + ++ + E W P+ IQ SI + L G D+L A+ G+GKTGA+ IPVI+ Sbjct 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + LK Q + + Sbjct 105 IQPALKAIQ---------AMVIVPTRELALQ 126 >sp|Q5JK84|RH15_ORYSJ DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP2 PE=1 SV=1 Length=432 Score = 290 bits (743), Expect = 1e-89, Method: Composition-based stats. Identities = 98/382 (26%), Positives = 164/382 (43%), Gaps = 58/382 (15%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G + +A G K+ + + Q + AL++ +RELA Q + ++F KY+ Sbjct 88 GMDVICQAKSGM-GKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYL 146 Query 314 DNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P+++ + GGV + +L+N IVVGTPGR+ L L+L VR +LDE Sbjct 147 --PEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDEC 204 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L S + R +I ++T K QV++ SATL S +++ + +K M P + + Sbjct 205 DKMLD---SLDMRRDVQEIFKMTPHDK--QVMMFSATL-SKEIRPVCKKFMQDPMEIYV- 257 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 +D T+H +V + + + + Sbjct 258 -DDEAKLTLHGLV-------------------------------------QHYIKLSEAE 279 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + +Q +IF ++ L + + F + +H Sbjct 280 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCE---------CNFPAISIHSGMTQE 330 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER + FK+G R L+ TD+ RGIDI V VIN +PD +Y+HR+GR GR Sbjct 331 ERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTK 390 Query 613 GLAISLVATEKEKVWYHVCSSR 634 GLAI+ V++ + + R Sbjct 391 GLAITFVSSASDSDVLNQVQER 412 Score = 80.9 bits (198), Expect = 9e-15, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+++ + P+++Q E IP + G DV+ A++G GKT F + + Sbjct 51 SGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSL 110 Query 62 QIV 64 Q + Sbjct 111 QQI 113 >sp|A2QRY2|DBP10_ASPNC ATP-dependent RNA helicase dbp10 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp10 PE=3 SV=1 Length=932 Score = 304 bits (778), Expect = 1e-89, Method: Composition-based stats. Identities = 125/535 (23%), Positives = 200/535 (37%), Gaps = 45/535 (8%) Query 224 NQALFPACVLKNAELKFNFGEEEFKFPPKDG-FVALSKAPDGYIVKSQHSGNAQVTQTKF 282 N L A K + + +D V +++ G ++ ++ Sbjct 98 NANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIQKL-KSHS 156 Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 + LI+ PSRELA QTL +K+ K L+ +L++GG + +Q S++ DI Sbjct 157 TQVGARGLILSPSRELALQTLKVVKELGK---GTDLKAVLLVGGDSLEEQFSMMAGNPDI 213 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 V+ TPGR L L+LS +R++V DEAD L G++ + + + +P Q Sbjct 214 VIATPGRFLHLKVEMNLDLSSIRYVVFDEADRLFEMGFAAQLTEILHGLPST------RQ 267 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP--KTDRLWERLG 460 ++ SATL V+ + + PT V L E + + + V K L L Sbjct 268 TLLFSATLPKSLVE-FARAGLQEPTLVRLDTESKISPDLQNAFFSVKSGDKEGALMYILH 326 Query 461 K--SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 A+ A+ + + A+ + IIF TK Sbjct 327 NVIKMPTGPTEAAQRMKEENASGKSSKFSKKRKRSDDKAINFKESPTKHSTIIFAATKHH 386 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L + G F+ +G RK + F+ G L+ TDVAARG Sbjct 387 VDYLYSLLNEAG---------FATSYAYGSLDQTARKIQVHNFRTGISNILVVTDVAARG 437 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 IDI + VIN P + + +VHR+GR RA R G + SLV + G+ Sbjct 438 IDIPILANVINYDFPSQAKIFVHRVGRTARAGRTGWSYSLVRDSDAPYLLDLQLFLGRRL 497 Query 639 YNTRLKEDGGCTIWYNEM-------QLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYG 691 R E G + ++ LS+ E +N + G+ Y Sbjct 498 VLGR--EHGDQVNFAEDVVVGGFPRDGLSQSCEWVNKVLDDTVDIAAQRSVASKGEKLYL 555 Query 692 QKRAAGGGSYKGHVDILAPT----------VQELAALEKEAQTSFLHL-GYLPNQ 735 + R A + + E + LE E + + GY PN+ Sbjct 556 RTRNAASLESAKRSKEVVSSDNWTALHPLFNDETSQLEAEREKMLARIGGYRPNE 610 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 32/104 (31%), Positives = 49/104 (47%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+IQ Sbjct 92 FQAMGLNANLLKAITRKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIQK 151 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + Q G +G S + + G+D Sbjct 152 LKSH--STQVGARG-----LILSPSRELALQTLKVVKELGKGTD 188 >sp|P87206|IF4A_CANAL ATP-dependent RNA helicase eIF4A OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=TIF1 PE=3 SV=1 Length=397 Score = 289 bits (740), Expect = 1e-89, Method: Composition-based stats. Identities = 110/426 (26%), Positives = 182/426 (43%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F LK ++ F +G E + + +++ D +G + + + Sbjct 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 A +ALI+ P+RELA Q N I Y+ K+ IGG + D + +G Sbjct 85 INENEKATQALILAPTRELALQIKNVITAIGLYL---KVTVHASIGGTSMSDDIEAFRSG 141 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V IVVGTPGR+ D++ +V+ +LDEAD +LS G+ + I + +P+ T Sbjct 142 VQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETT---- 197 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 Q+++ SAT+ DV +++ K M+ P + +K ++ + + + V Sbjct 198 --QIVLLSATMP-QDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVE---------- 244 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 ++ K + + QA+IFC T+ Sbjct 245 -----------------------------LEDYKFDCLCDLYDSISVTQAVIFCNTRSKV 275 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L +Q F+ +H D ER ++ F+ G R LI TD+ ARGI Sbjct 276 EFLTNKLREQ---------HFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGI 326 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP K+NY+HRIGR GR R G+AI+ V + + Y Sbjct 327 DVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEK-----FY 381 Query 640 NTRLKE 645 +T+++E Sbjct 382 STQIEE 387 Score = 93.3 bits (230), Expect = 6e-19, Method: Composition-based stats. Identities = 24/101 (24%), Positives = 44/101 (44%), Gaps = 9/101 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + E K Q + + + + +A + Sbjct 85 INENEKATQ---------ALILAPTRELALQIKNVITAIGL 116 >sp|A1D8G1|DHH1_NEOFI ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dhh1 PE=3 SV=1 Length=507 Score = 293 bits (749), Expect = 2e-89, Method: Composition-based stats. Identities = 111/425 (26%), Positives = 171/425 (40%), Gaps = 68/425 (16%) Query 213 GLAFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 GL FE +F A K + + +EE G L++A +G K+ Sbjct 46 GLEFEDFYIKRELMMGIFEAGFEKPSPI-----QEETIPVALTGRDILARAKNG-TGKTA 99 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + +ALI+ P+RELA QT K K++ + ++ GG Sbjct 100 AFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLG---INVMVTTGGTGLM 156 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L + V I+VGTPGR+ DL S G +LS+ V+DEAD LLS ++ I ++ + Sbjct 157 DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSF 216 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 P K QV++ SAT VK +K M P ++L ++ + V Sbjct 217 HP------KDRQVMLFSATFP-LIVKSFKDKHMRNPYEINLM-DELTLRGITQYYAFVEE 268 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K K + +++Q+I Sbjct 269 KQ----------------------------------------KVHCLNTLFSKLQINQSI 288 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC H R + F+ G R L+ Sbjct 289 IFCNSTNRVELLAKKITELG---------YSCFYSHARMLQQHRNRVFHDFRNGVCRNLV 339 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Y + Sbjct 340 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKI 399 Query 631 CSSRG 635 G Sbjct 400 EQELG 404 Score = 97.9 bits (242), Expect = 5e-20, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + K T + + Sbjct 109 I---------NPKSTKTQALILVPTRELALQ 130 >sp|A1CX72|PRP28_NEOFI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=prp28 PE=3 SV=1 Length=796 Score = 301 bits (770), Expect = 2e-89, Method: Composition-based stats. Identities = 99/457 (22%), Positives = 182/457 (40%), Gaps = 80/457 (18%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 ++ GL + + ++ A + + ++ G Sbjct 367 EESGLPKRLLELVDQVGYKEPTPIQRAAIPIAL--------QSRDLIGVAVTGSGKTASF 418 Query 270 QHSGNAQVTQTKFLP-------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +++ + + P A+++ P+RELA+Q ++F + + + Sbjct 419 LLPLLVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFTQPLG---FNVVS 475 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 I+GG + +Q L NG +I++ TPGRL D + L LSQ ++++DEAD ++ G+ + Sbjct 476 IVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEE 535 Query 383 FINRMHNQIP--------------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 +N++ + +P + Q ++ +AT+ S V++++ K + P Sbjct 536 PVNKILDALPVTNEKPDTEEAENSAAMRSHRYRQTMMYTATMPSA-VERIARKYLRRPAI 594 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 V + DTV V + + R R D+ + RP Sbjct 595 VTIGSAGEAVDTVEQRVEMIAGEDKR--------KKRLADILSSGEFRPP---------- 636 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 I+F K +CD + + Q G FS V LHG Sbjct 637 --------------------IIVFVNIKRNCDAIAREIKQMG---------FSSVTLHGS 667 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + +R+ L + G L+ TD+A RGID+ V V+N + + ++Y HRIGR GR Sbjct 668 KTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGR 727 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 A + G+AI+ + E V Y + K + +E Sbjct 728 AGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEE 764 Score = 108 bits (270), Expect = 4e-23, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V+++ + PT IQ +IP+ L D++ A TGSGKT +F +P+ Sbjct 363 MRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPL 422 Query 61 IQIVYETLK-DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + E + D+ E +K + + F Sbjct 423 LVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFT 466 >sp|A5UI36|RHLB_HAEIG ATP-dependent RNA helicase RhlB OS=Haemophilus influenzae (strain PittGG) OX=374931 GN=rhlB PE=3 SV=1 Length=415 Score = 289 bits (740), Expect = 2e-89, Method: Composition-based stats. Identities = 102/399 (26%), Positives = 168/399 (42%), Gaps = 62/399 (16%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPN----APKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + T PN P+ALI+ P+RELA Q N+ + K Sbjct 51 GQAQTGTGKTMAFL-TATFHHLLTHQDPNLEYPHPRALILAPTRELAVQISNDAEFLAK- 108 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL V+E GVDI++GT GR+ D V G + L +++ +VLDEA Sbjct 109 --ASGLKTALAYGGDGYDKQLQVIECGVDILIGTTGRVIDYVKQGVIGLDEIQVVVLDEA 166 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + + P + ++ SATL S+ V++L+ + M+ P +++++ Sbjct 167 DRMFDLGFIRDIRYLLRKCPA----PQARLTMLFSATL-SYKVRELAFEDMNDPEYIEIE 221 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 E + E Sbjct 222 PEQKTGHRIK----------------------------------------EELFYPSNQD 241 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + +++ ++ I+F TK C+ + Y G L GD Sbjct 242 KMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADG---------HRVGLLTGDVAQK 292 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 +R L++F GD+ L+ TDVAARG+ I V +V N LPD++++YVHRIGR GRA Sbjct 293 KRLSLLKQFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGES 352 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 G++IS E + G ++ + + + Sbjct 353 GVSISFACEEYAMNLPAIEEYIGHSIPVSQYETEALLEL 391 Score = 92.9 bits (229), Expect = 1e-18, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 110/352 (31%), Gaps = 59/352 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P + A+ + + T IQA S+P+ L G DV A+TG+GKT AF Sbjct 11 FSALPLHPIVRGALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKTMAFLTATFHH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + Q + + + + + + + + G + Sbjct 71 LLTH---QDPNLEYPHPRALILAPTRELAVQISN--------------DAEFLAKASGLK 113 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 114 TALAYGGDGYDKQLQVIECGV----------DILIGTT---------------GRVIDYV 148 Query 184 EEFTMH-DTIGCYLDIDKGHVKFSKNG----KDLGLAFEIPPHMKNQALFPACVLKNAEL 238 ++ + D I + +D+ F + L P K EL Sbjct 149 KQGVIGLDEIQVVV-LDEADRMFDLGFIRDIRYLLRKCPAPQARLTMLFSATLSYKVREL 207 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 F + + + + S A + + ++ ++ Sbjct 208 AFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQDKMALLLTLMEDEWPERCIVFANTK-- 265 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ Y+ R L+ G VA + +LS+L+ +DI+V T Sbjct 266 -----HRCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQFTDGDLDILVAT 312 >sp|Q6FQU5|DHH1_CANGA ATP-dependent RNA helicase DHH1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DHH1 PE=3 SV=1 Length=507 Score = 292 bits (748), Expect = 2e-89, Method: Composition-based stats. Identities = 105/427 (25%), Positives = 170/427 (40%), Gaps = 71/427 (17%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D L E+ + ++ + G L++A +G K Sbjct 33 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIT----------GRDILARAKNG-TGK 81 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + K N +ALI+ P+RELA QT I+ ++ + ++ GG Sbjct 82 TAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCG---VSCMVTTGGTN 138 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L V ++VGTPGR+ DL S +LS+ V+DEAD +LS+ + I ++ Sbjct 139 LRDDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLSRDFKTIIEQVL 198 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P+ Q ++ SAT VK+ K +H P ++L E+ + V Sbjct 199 TFLPKAH------QSLLFSATFP-LTVKEFMVKHLHKPYEINLM-EELTLKGITQYYAFV 250 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + +++Q Sbjct 251 EERQ----------------------------------------KLHCLNTLFSKLQINQ 270 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 AIIFC + + L + G +SC H K +R + F++G VR Sbjct 271 AIIFCNSTNRVELLAKKITDLG---------YSCYYSHARMKQQDRNKVFHDFRQGKVRT 321 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ Y Sbjct 322 LVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLY 381 Query 629 HVCSSRG 635 + G Sbjct 382 KIEQELG 388 Score = 100 bits (249), Expect = 7e-21, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 41/92 (45%), Gaps = 9/92 (10%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + E+ + E + P+ IQ E+IP+ + G D+L A+ G+GKT AF IP ++ Sbjct 32 SFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 91 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + L Q + + Sbjct 92 KIKPKLNKIQ---------ALIMVPTRELALQ 114 >sp|Q4WWD3|DHH1_ASPFU ATP-dependent RNA helicase dhh1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dhh1 PE=3 SV=1 Length=507 Score = 292 bits (748), Expect = 2e-89, Method: Composition-based stats. Identities = 111/425 (26%), Positives = 171/425 (40%), Gaps = 68/425 (16%) Query 213 GLAFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 GL FE +F A K + + +EE G L++A +G K+ Sbjct 46 GLEFEDFYIKRELMMGIFEAGFEKPSPI-----QEETIPVALTGRDILARAKNG-TGKTA 99 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + +ALI+ P+RELA QT K K++ + ++ GG Sbjct 100 AFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHLG---INVMVTTGGTGLM 156 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L + V I+VGTPGR+ DL S G +LS+ V+DEAD LLS ++ I ++ + Sbjct 157 DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSF 216 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 P K QV++ SAT VK +K M P ++L ++ + V Sbjct 217 HP------KDRQVMLFSATFP-LIVKSFKDKHMRNPYEINLM-DELTLRGITQYYAFVEE 268 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K K + +++Q+I Sbjct 269 KQ----------------------------------------KVHCLNTLFSKLQINQSI 288 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC H R + F+ G R L+ Sbjct 289 IFCNSTNRVELLAKKITELG---------YSCFYSHARMLQQHRNRVFHDFRNGVCRNLV 339 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Y + Sbjct 340 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKI 399 Query 631 CSSRG 635 G Sbjct 400 EQELG 404 Score = 97.5 bits (241), Expect = 6e-20, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + K T + + Sbjct 109 I---------NPKSTKTQALILVPTRELALQ 130 >sp|Q54E49|DDX6_DICDI Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium discoideum OX=44689 GN=ddx6 PE=3 SV=1 Length=423 Score = 290 bits (741), Expect = 2e-89, Method: Composition-based stats. Identities = 102/425 (24%), Positives = 170/425 (40%), Gaps = 71/425 (17%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 DL L ++ + + ++ + G +++A +G K+ Sbjct 53 DLHLKRDLLRGIFEKGYVKPSPIQEKAIPIAL----------AGRDIMARAKNG-TGKTA 101 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + +T + + LI+ P+RELA QT K+ KY++ ++ + GG + + Sbjct 102 SFLIPALEKTDPTKDVIQVLILVPTRELALQTSQVCKELGKYMN---VQVMASTGGTSLK 158 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L N V I+V TPGR+ DL NLS +++DEAD LLSQ + + ++ N Sbjct 159 DDIMRLYNPVHILVATPGRVLDLAQKNVANLSNCHTMIMDEADKLLSQEFQPLVEQLINF 218 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 +PQ + Q+++ SAT VK E + ++L E+ V V Sbjct 219 LPQ------QRQILLFSATFP-VTVKSFKEHYLQQAFEINLM-EELTLKGVTQYYAFVEE 270 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 + K + +++Q+I Sbjct 271 RQ----------------------------------------KIHCLNTLFSKLQINQSI 290 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC +H R + F+ G R L+ Sbjct 291 IFCNSVNRVELLAKKITELG---------YSCFFIHAKMVQAHRNRVFHDFRNGACRNLV 341 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 +D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ E Y + Sbjct 342 SSDLFTRGIDIQDVNVVINFDFPKHSETYLHRIGRSGRFGHLGLAINLITYEDRFSLYKI 401 Query 631 CSSRG 635 G Sbjct 402 EQELG 406 Score = 95.6 bits (236), Expect = 1e-19, Method: Composition-based stats. Identities = 28/129 (22%), Positives = 53/129 (41%), Gaps = 6/129 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + ++ + + E ++ P+ IQ ++IP+ L G D++ A+ G+GKT +F IP ++ Sbjct 51 FDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALEK 110 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKW--QMNPYDRGSAFAIGSDGLCCQS--REVKEW 119 T Q + A ++ ++ Y A R Sbjct 111 TDPTKDVIQVLI--LVPTRELALQTSQVCKELGKYMNVQVMASTGGTSLKDDIMRLYNPV 168 Query 120 HGCRATKGL 128 H AT G Sbjct 169 HILVATPGR 177 >sp|Q8NJM2|DBP10_ASPFU ATP-dependent RNA helicase dbp10 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp10 PE=3 SV=1 Length=869 Score = 302 bits (773), Expect = 2e-89, Method: Composition-based stats. Identities = 116/531 (22%), Positives = 200/531 (38%), Gaps = 51/531 (10%) Query 209 GKDLGLAFEIPPHMKNQAL-----FPACVLKNAELKFNFGEEEFKFPPKDGF-------- 255 + A ++K + + F A L LK + F P Sbjct 48 AEQQTSANRKASNLKGRTVKKGGGFQAMGLSANLLK-AIARKGFSVPTPIQRKTIPVIMD 106 Query 256 ----VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 V +++ G ++ A + L++ PSRELA QTL +K+ + Sbjct 107 DQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGA-RGLVLSPSRELALQTLKVVKELGR 165 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 L+ +L++GG + +Q +++ DI++ TPGR L L+LS +R++V DE Sbjct 166 ---GTDLKSVLLVGGDSLEEQFAMIAGNPDIIIATPGRFLHLKVEMNLDLSSIRYVVFDE 222 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD L G++ + + + +P Q ++ SATL V+ + + PT V L Sbjct 223 ADRLFEMGFAAQLTEILHGLPA------NRQTLLFSATLPKSLVE-FARAGLQEPTLVRL 275 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT----DDVHAKDNTRPGANSPEMWSE 487 E + + + V + ++ A++ + ++ Sbjct 276 DTESKISPDLQNAFFSVKSSEKEGALLYILHEVIKMPTGPTEVSQQRKEEDASAKNLKNK 335 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 K + E AV + I+F TK D L + G F+ ++G Sbjct 336 KRKRAEMEKAVNTRESPTKHSTIVFAATKHHVDYLYSLLCEAG---------FAVSYVYG 386 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 RK ++ F+ G L+ TDVAARGIDI + VIN P + + +VHR+GR Sbjct 387 SLDQTARKIQVQNFRTGMTNILVVTDVAARGIDIPILANVINYDFPSQPKIFVHRVGRTA 446 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 RA R G + SLV + G+ R E G + ++ S + L+ Sbjct 447 RAGRKGWSYSLVRDADAPYLLDLQLFLGRRLVVGR--EFGDQVNFAEDVVTGSLPRDGLS 504 Query 668 CTISQVEPDIKVPVD-------EFDGKVTYGQKRAAGGGSYKGHVDILAPT 711 + V + D G+ Y + R A + + Sbjct 505 QSCEWVTKVLDDNADLAAQRTVAAKGEKLYMRTRNAASLESAKRSKQVVSS 555 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 30/104 (29%), Positives = 49/104 (47%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 72 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEK 131 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + G +G S + + G+D Sbjct 132 LKSH--STKVGARG-----LVLSPSRELALQTLKVVKELGRGTD 168 >sp|C4K8M8|RHLB_HAMD5 ATP-dependent RNA helicase RhlB OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) OX=572265 GN=rhlB PE=3 SV=1 Length=422 Score = 290 bits (741), Expect = 2e-89, Method: Composition-based stats. Identities = 113/467 (24%), Positives = 192/467 (41%), Gaps = 72/467 (15%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L + ++NQ + ++ A ++ G + Sbjct 13 DFALHPLVIKAIENQGFYHCTPIQALSFPITLA--------GRDVAAQAQTGTGKTLAFL 64 Query 271 HSG-NAQVTQTKFLPNA---PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 S N +T P+ALI+ P+RELA Q + + ++ L+ L GG Sbjct 65 ASVFNYLLTNAADETRQCEQPRALIMVPTRELAIQIYTDAETLSQFTS---LKMGLAYGG 121 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 QL +LE+GVDI++GTPGR+ D ++L+ ++ +VLDEAD + G+ I Sbjct 122 DGYDKQLKILESGVDILIGTPGRIIDYAKQNFIHLNALQVIVLDEADRMYDLGFIKDIRW 181 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVV 445 + ++P ++ ++ SATL S+ V++LS + M+ P +++++ + + + Sbjct 182 LFRRMP----PAEKRLNMLFSATL-SYRVRELSFEQMNHPEYIEVEPLQKIGSQIQEELF 236 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 P N RL + L I+E Sbjct 237 YPSNEDKMRLLQTL-----------------------------------------IEEEW 255 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+ IIF TK C+++ + + G L GD +R Q L+ F KG Sbjct 256 PDRCIIFANTKQRCEDIWGHLVADG---------HRVGLLTGDVAQRKRIQILDDFSKGY 306 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TDVAARG+ I V +V N LP+ ++Y+HRIGR GRA G +ISL Sbjct 307 LDILVATDVAARGLHIPKVTHVFNYDLPENVEDYIHRIGRTGRAGEKGYSISLACEAFAS 366 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 + + G + ++ T + + L H + +Q Sbjct 367 HLSTIEACTGHRIPTSEYNKEALLTDLP-QPKRLQRHHRHYAGSRNQ 412 Score = 102 bits (254), Expect = 8e-22, Method: Composition-based stats. Identities = 56/351 (16%), Positives = 122/351 (35%), Gaps = 56/351 (16%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + P + +A+E + T IQA S P+ L G DV A+TG+GKT AF V Sbjct 11 FSDFALHPLVIKAIENQGFYHCTPIQALSFPITLAGRDVAAQAQTGTGKTLAFLASVFNY 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + D E ++ + + + Y + + ++ + Sbjct 71 LLTNAAD--ETRQCEQPRALIMVPTRELAIQIYT--------------DAETLSQFTSLK 114 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ + G+ + +GT + +Y Sbjct 115 MGLAYGGDGYDKQLKILESGV----------DILIGT---------------PGRIIDYA 149 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAF-EIPPHMKNQALFPACVLKNAELKFN 241 ++ +H + +D+ + KD+ F +PP K + + L + + Sbjct 150 KQNFIHLNALQVIVLDEADRMYDLGFIKDIRWLFRRMPPAEKRLNMLFSATLSYRVRELS 209 Query 242 FGEEE-FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-KALIVEPSRELA 299 F + ++ + + + + ++ QT P + +I ++ Sbjct 210 FEQMNHPEYIEVEPLQKIGSQIQEELFYPSNEDKMRLLQTLIEEEWPDRCIIFANTK--- 266 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ R L+ G VA R ++ +L++ +DI+V T Sbjct 267 ----QRCEDIWGHLVADGHRVGLLTGDVAQRKRIQILDDFSKGYLDILVAT 313 >sp|Q4WPE9|PRP28_ASPFU Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=prp28 PE=3 SV=1 Length=796 Score = 300 bits (768), Expect = 3e-89, Method: Composition-based stats. Identities = 99/457 (22%), Positives = 182/457 (40%), Gaps = 80/457 (18%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 ++ GL + + ++ A + + ++ G Sbjct 367 EESGLPKRLLELVDQVGYKEPTPIQRAAIPIAL--------QSRDLIGVAVTGSGKTASF 418 Query 270 QHSGNAQVTQTKFLP-------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +++ + + P A+++ P+RELA+Q ++F + + + Sbjct 419 LLPLLVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFTQPLG---FNVVS 475 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 I+GG + +Q L NG +I++ TPGRL D + L LSQ ++++DEAD ++ G+ + Sbjct 476 IVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEE 535 Query 383 FINRMHNQIP--------------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 +N++ + +P + Q ++ +AT+ S V++++ K + P Sbjct 536 PVNKILDALPVTNEKPDTEEAENSAAMRSHRYRQTMMYTATMPSA-VERIARKYLRRPAI 594 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 V + DTV V + + R R D+ + RP Sbjct 595 VTIGSAGEAVDTVEQRVEMIAGEDKR--------KKRLADILSSGEFRPP---------- 636 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 I+F K +CD + + Q G FS V LHG Sbjct 637 --------------------IIVFVNIKRNCDAIAREIKQMG---------FSSVTLHGS 667 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + +R+ L + G L+ TD+A RGID+ V V+N + + ++Y HRIGR GR Sbjct 668 KTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGR 727 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 A + G+AI+ + E V Y + K + +E Sbjct 728 AGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEE 764 Score = 108 bits (270), Expect = 5e-23, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V+++ + PT IQ +IP+ L D++ A TGSGKT +F +P+ Sbjct 363 MRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPL 422 Query 61 IQIVYETLK-DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + E + D+ E +K + + F Sbjct 423 LVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFT 466 >sp|A4R5B8|DBP10_PYRO7 ATP-dependent RNA helicase DBP10 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP10 PE=3 SV=1 Length=914 Score = 303 bits (775), Expect = 3e-89, Method: Composition-based stats. Identities = 109/474 (23%), Positives = 186/474 (39%), Gaps = 35/474 (7%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + +GL + + + ++ + + V +++ G Sbjct 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRD--------VVGMARTGSGKTAA 143 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ A +ALI+ PSRELA QTL +K+F K L+ +L++GG + Sbjct 144 FVIPMIERLRAHSARVGA-RALIMSPSRELALQTLKVVKEFGK---GTDLKTVLLVGGDS 199 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 DQ + DI++ TPGR L L+LS ++++V DEAD L G++ + + Sbjct 200 LEDQFGFMTTNPDIIIATPGRFLHLKVEMSLDLSSIKYVVFDEADRLFEMGFATQLTEIL 259 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + +P Q ++ SATL V+ + + P+ V L E + + V Sbjct 260 HSLP------PSRQTLLFSATLPRSLVE-FARAGLQDPSLVRLDAETKISPDLESAFFSV 312 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + E+ G DV P + + K +G A ++ Sbjct 313 -----KGAEKEGALLHILQDVIKMPTGTPEGFKEDKDEGSKKRKRGPDRPNAKEKPTEHS 367 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 IIF TK + L +Q G ++ +G RK +E F++G Sbjct 368 TIIFTATKFHVEYLTSILVQAG---------YAVSHAYGALDQTARKIQVEDFRRGKTNI 418 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARGIDI + VIN D+ + +VHR+GR RA + G + SLV+ Sbjct 419 LVVTDVAARGIDIPVLANVINYDFCDQPKVFVHRVGRTARAGQKGWSYSLVSDIDAPYLL 478 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 + G+ + G + L + + VE ++ D Sbjct 479 DLQLFLGRRLVVGQDTSAGANFASDVVLGALQR--NSIETNVEWVEKVVQESHD 530 Score = 104 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 34/104 (33%), Positives = 47/104 (45%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ P + QA+ + +PT IQ +SIPLIL DV+ A TGSGKT AF IP+I+ Sbjct 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIER 151 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + S + + F G+D Sbjct 152 LRAHSARV-------GARALIMSPSRELALQTLKVVKEFGKGTD 188 >sp|A6QXC1|DBP3_AJECN ATP-dependent RNA helicase DBP3 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP3 PE=3 SV=1 Length=487 Score = 292 bits (746), Expect = 3e-89, Method: Composition-based stats. Identities = 113/432 (26%), Positives = 182/432 (42%), Gaps = 78/432 (18%) Query 215 AFEIPPHMKNQALFP------ACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 AF P NQ P +++ + F + +++ G + Sbjct 72 AFSYLPSDSNQLYGPLEHFSKPTPIQSVTWPYLFA--------GRDVIGVAETGSGKTLA 123 Query 269 SQHSGNAQVTQTKFLPNAPK--ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 +V + ++ + A+I+ P+RELA Q + + +F + I GG Sbjct 124 FGVPCIRKVLEINASHSSFRISAVIITPTRELAMQIHDQLVKFT----PNGVGLACIYGG 179 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + DQ L+ ++V TPGRL D S LNL +V++LVLDEAD +L +G+ I Sbjct 180 ASKDDQRRALKK-ASVIVATPGRLKDFHSDESLNLKKVKYLVLDEADRMLDKGFEQDIKD 238 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS----VPDTVH 442 + + +P ++ Q ++ +AT V+KL+ M P V + G+ S + Sbjct 239 IVSAMP----SSRKRQTVMFTATWP-ISVRKLATTFMKEPVTVTIGGDLSSDIRANTRIK 293 Query 443 HVVVPVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 +V V P K RL L + Sbjct 294 QIVEVVKPENKESRLLSLLNQ-------------------------------------YQ 316 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + MD+ ++FC K + +E++ +G F +HGD ER +L+ Sbjct 317 RGRNAMDKVLVFCLYKKEATRIERFIRSKG---------FKVAGIHGDMNQTERFNSLDA 367 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 FK G V L+ TDVAARG+DI V V+NVT P ++YVHRIGR GRA GLAI++ Sbjct 368 FKSGSVPVLVATDVAARGLDIPAVKLVLNVTFPLTVEDYVHRIGRTGRAGSDGLAITMFT 427 Query 621 TEKEKVWYHVCS 632 + + + + Sbjct 428 ENDKALSGGLVN 439 Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats. Identities = 42/146 (29%), Positives = 59/146 (40%), Gaps = 14/146 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + AFS + E + PT IQ+ + P + G DV+ AETGSGKT AF +P Sbjct 70 ITAFSYLPSDSNQLYGPLE-HFSKPTPIQSVTWPYLFAGRDVIGVAETGSGKTLAFGVPC 128 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 I+ V E + I + + M +D+ F GL C Sbjct 129 IRKVLEINASHSSFRISAVII----TPTRELAMQIHDQLVKFTPNGVGLACIYGGASKDD 184 Query 112 QSREVKEWHGCRATKGLMKGKHYYEV 137 Q R +K+ AT G +K H E Sbjct 185 QRRALKKASVIVATPGRLKDFHSDES 210 >sp|Q1DMX8|PRP28_COCIM Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Coccidioides immitis (strain RS) OX=246410 GN=PRP28 PE=3 SV=2 Length=820 Score = 301 bits (770), Expect = 3e-89, Method: Composition-based stats. Identities = 97/380 (26%), Positives = 166/380 (44%), Gaps = 70/380 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+I+ P+RELA+Q N + K+ + + I+GG + +Q L NG +I++ Sbjct 457 DGPYAIILAPTRELAQQIENEAR---KFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIII 513 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP------------ 392 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P Sbjct 514 ATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAE 573 Query 393 -------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + Q ++ +AT+ S V++++ K + P V + DTV V Sbjct 574 DARAMSQHLGGKDRYRQTMMYTATMPSA-VERIARKYLRRPAIVTIGNIGEAVDTVEQRV 632 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 ++ + R R D+ A RP Sbjct 633 EFISGEDKR--------KKRLADILASGEFRPP--------------------------- 657 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 I+F K +CD + + Q G +S V LHG + +R+ L + G+ Sbjct 658 ---IIVFVNIKRNCDAVARDIKQMG---------YSSVTLHGSKTQEQREAALASVRNGN 705 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TD+A RGID+ V V+N + ++Y HRIGR GRA + G+AI+ + E Sbjct 706 TDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDAD 765 Query 626 VWYHVCSSRGKGCYNTRLKE 645 V Y + K + +E Sbjct 766 VMYDLKQMLMKSSISRVPEE 785 Score = 109 bits (272), Expect = 2e-23, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 50/103 (49%), Gaps = 1/103 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + ++++ + P+ IQ +IP+ L D++ A TGSGKT AF +P+ Sbjct 379 MRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPL 438 Query 61 IQIVYETLK-DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + + E + D+ E +K + + + F Sbjct 439 LVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARKF 481 >sp|A1DNG2|DBP10_NEOFI ATP-dependent RNA helicase dbp10 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp10 PE=3 SV=1 Length=934 Score = 303 bits (776), Expect = 3e-89, Method: Composition-based stats. Identities = 113/495 (23%), Positives = 191/495 (39%), Gaps = 44/495 (9%) Query 209 GKDLGLAFEIPPHMKNQAL-----FPACVLKNAELKFNFGEEEFKFPPKDGF-------- 255 + A ++K + + F A L LK + F P Sbjct 68 AEQQTSANRKASNLKGRTVKKGGGFQAMGLSANLLK-AIARKGFSVPTPIQRKTIPVIMD 126 Query 256 ----VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 V +++ G ++ A + LI+ PSRELA QTL +K+ + Sbjct 127 DQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGA-RGLILSPSRELALQTLKVVKELGR 185 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 L+ +L++GG + +Q +++ DIV+ TPGR L L+LS +R++V DE Sbjct 186 ---GTDLKSVLLVGGDSLEEQFAMMAGNPDIVIATPGRFLHLKVEMNLDLSSIRYVVFDE 242 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD L G++ + + + +P Q ++ SATL V+ + + PT V L Sbjct 243 ADRLFEMGFAAQLTEILHGLPA------NRQTLLFSATLPKSLVE-FARAGLQEPTLVRL 295 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT----DDVHAKDNTRPGANSPEMWSE 487 E + + + V + ++ A++ ++ Sbjct 296 DTESKISPDLQNAFFSVKSSEKEGALLYILQEVIKMPTGPTEVSQQRKEEDASAKNWKNK 355 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 K + E AV + I+F TK D L + G F+ ++G Sbjct 356 KRKRAEMEKAVNMRESPTKHSTIVFAATKHHVDYLYSLLSEAG---------FAVSYVYG 406 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 RK ++ F+ G L+ TDVAARGIDI + VIN P + + ++HR+GR Sbjct 407 SLDQTARKIQVQNFRTGMTNILVVTDVAARGIDIPILANVINYDFPSQPKIFIHRVGRTA 466 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 RA R G + SLV + G+ R E G + ++ S + L+ Sbjct 467 RAGRKGWSYSLVRDADAPYLLDLQLFLGRRLVVGR--EFGDQVNFAEDVVTGSLPRDGLS 524 Query 668 CTISQVEPDIKVPVD 682 + V + D Sbjct 525 QSCEWVTKVLDDNAD 539 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 30/104 (29%), Positives = 49/104 (47%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IP+I+ DV+ A TGSGKT AF IP+I+ Sbjct 92 FQAMGLSANLLKAIARKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEK 151 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + G +G S + + G+D Sbjct 152 LKSH--STKVGARG-----LILSPSRELALQTLKVVKELGRGTD 188 >sp|Q5APT8|DBP3_CANAL ATP-dependent RNA helicase DBP3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP3 PE=3 SV=1 Length=564 Score = 294 bits (752), Expect = 3e-89, Method: Composition-based stats. Identities = 101/386 (26%), Positives = 168/386 (44%), Gaps = 67/386 (17%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 L + P+RELA Q +N+ + + + + + GGV+ DQ+ ++ ++VV TP Sbjct 225 SVLCISPTRELALQIYDNLIEL---TADSGVNCVAVYGGVSKDDQIRKIKT-ANVVVATP 280 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 GRL DL++ G +NL +V +LVLDEAD +L +G+ + I + + + Q ++ + Sbjct 281 GRLVDLINDGAINLGKVNYLVLDEADRMLEKGFEEDIKTIIS-----NTSNSERQTLMFT 335 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 AT +V++L+ M+ P V + D S + VV +N Sbjct 336 ATWPK-EVRELANNFMNSPVKVTVGDRDELSANKRITQVVEVINK--------------- 379 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + K L E ++ +IF K + +E + Sbjct 380 --------------------FDKEKKLIQLLRKYNANESSDNKILIFALYKKEASRIENF 419 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 K ++FS +HGD +R L FK G L+ TDVAARG+DI V Sbjct 420 L---------KRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVK 470 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-----------SR 634 VIN+T P ++YVHRIGR GRA G A +L +++ + +C+ Sbjct 471 VVINLTFPLTIEDYVHRIGRTGRAGAKGTAHTLFTEDEKHLSGALCNILRGANQPVPEEL 530 Query 635 GKGCYNTRLKEDGGCTIWYNEMQLLS 660 K +T+ K +Y ++ + Sbjct 531 LKFGGHTKKKAHSVYGAFYKDVDMTK 556 Score = 95.2 bits (235), Expect = 4e-19, Method: Composition-based stats. Identities = 38/141 (27%), Positives = 57/141 (40%), Gaps = 19/141 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++ + I + + + PT IQ+ S P +L G DV+ AETGSGKT AF +P Sbjct 154 ILSFDQVQLTSAITSKLSK--FDKPTPIQSVSWPFLLSGKDVIGVAETGSGKTFAFGVPA 211 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 I + T KT S + + YD S C Sbjct 212 INNIITTGN-------TKTLSVLCISPTRELALQIYDNLIELTADSGVNCVAVYGGVSKD 264 Query 112 -QSREVKEWHGCRATKGLMKG 131 Q R++K + AT G + Sbjct 265 DQIRKIKTANVVVATPGRLVD 285 >sp|A6QUM7|DBP10_AJECN ATP-dependent RNA helicase DBP10 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP10 PE=3 SV=1 Length=900 Score = 302 bits (774), Expect = 3e-89, Method: Composition-based stats. Identities = 114/556 (21%), Positives = 210/556 (38%), Gaps = 48/556 (9%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 ++ VK + LGL + + + ++ + +++ V Sbjct 76 NLRGRTVKKGGGFQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQD--------VV 127 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 +++ G ++ ++ +ALI+ PSRELA QTL +K+ + Sbjct 128 GMARTGSGKTAAFVIPMIEKL-KSHSAKFGSRALILSPSRELALQTLKVVKELGR---GT 183 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 L+ +L++GG + +Q + + DI++ TPGR L L+LS +R++V DEAD L Sbjct 184 DLKSVLLVGGDSLEEQFEYMASNPDIIIATPGRFLHLKVEMSLDLSSIRYVVFDEADRLF 243 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 G++ + + + +P Q ++ SATL V+ + + P + L E Sbjct 244 EMGFATQLTEILHGLPSS------RQTLLFSATLPKSLVE-FARAGLQEPILIRLDAESK 296 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 + + + V E + T + E + K + E Sbjct 297 ISPDLQNAFFTVKSSEK---EGALLHVLHEVIKIPTGETEALKRAKEEVKHSKKRKRSEV 353 Query 497 AVRAIKEHKMD-QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + KE + IIF TK D L G F+ +G RK Sbjct 354 TSNSHKESPTEHSTIIFTATKHHVDYLTSILRTSG---------FAVSYAYGSLDQTARK 404 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 ++ F+ G L+ TDVAARGIDI + VIN P + + +VHR+GR RA + G + Sbjct 405 IEVQNFRDGITHILVVTDVAARGIDIPILSNVINYDFPSQPKIFVHRVGRTARAGKTGWS 464 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL--SEIEEHLNCTISQV 673 SL+ + G+ R + L ++ + + Sbjct 465 YSLIRESDTPYLLDLQLFLGRPLILGRGSGQQLNYAENVVVGSLPRDKVARYTEWMTKLL 524 Query 674 EPDIKVPVD---EFDGKVTYGQKRAAGGGSYKGHVDILAPTVQ----------ELAALEK 720 + D+ + + G+ Y + R + G + + + E + LE+ Sbjct 525 DEDVDIELQREVAIKGEKLYMRTRNSASGESAKRAKAVVESAEWMMVHPLFNDESSRLEE 584 Query 721 EAQTSFLHL-GYLPNQ 735 + + + GY P + Sbjct 585 QREKMLARVGGYKPQE 600 Score = 99.8 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 28/104 (27%), Positives = 46/104 (44%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +G+ + +A+ + +PT IQ ++IPL+L DV+ A TGSGKT AF IP+I+ Sbjct 88 FQSLGLNAALLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEK 147 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + S + + G+D Sbjct 148 LKSHSAKF-------GSRALILSPSRELALQTLKVVKELGRGTD 184 >sp|Q0U7S9|DHH1_PHANO ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DHH1 PE=3 SV=1 Length=522 Score = 292 bits (748), Expect = 3e-89, Method: Composition-based stats. Identities = 111/425 (26%), Positives = 173/425 (41%), Gaps = 68/425 (16%) Query 213 GLAFE--IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 GL FE +F A K + + +EE G L++A +G K+ Sbjct 48 GLEFEDFFIKRELMMGIFEAGFEKPSPI-----QEETIPVALTGRDILARAKNG-TGKTA 101 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + + +ALI+ P+RELA QT K K++ + ++ GG + Sbjct 102 AFVIPTLERVNPKISKTQALILVPTRELALQTSQVCKTLGKHLG---INVMVSTGGTGLK 158 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L + V I+VGTPGR+ DL G +LS + V+DEAD LLS ++ + ++ Sbjct 159 DDIIRLSDPVHIIVGTPGRILDLAGKGVADLSTCQTFVMDEADKLLSPEFTPVVEQLLGF 218 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 P K QV++ SAT VK +K M+ P ++L ++ + V Sbjct 219 HP------KDRQVMLFSATFPIV-VKTFKDKHMNSPYEINLM-DELTLRGITQYYAFVEE 270 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K K + +++Q+I Sbjct 271 KQ----------------------------------------KVHCLNTLFNKLQINQSI 290 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC H H R + F+ G R L+ Sbjct 291 IFCNSTNRVELLAKKITELG---------YSCFYSHARMLQHNRNRVFHDFRNGVCRNLV 341 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ E Y + Sbjct 342 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWEDRFNLYRI 401 Query 631 CSSRG 635 G Sbjct 402 EQELG 406 Score = 96.7 bits (239), Expect = 1e-19, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 51 FEDFFIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 110 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 V + Q + + Sbjct 111 VNPKISKTQ---------ALILVPTRELALQ 132 >sp|Q55BR9|DDX49_DICDI Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium discoideum OX=44689 GN=ddx49 PE=3 SV=1 Length=508 Score = 292 bits (747), Expect = 4e-89, Method: Composition-based stats. Identities = 106/477 (22%), Positives = 181/477 (38%), Gaps = 69/477 (14%) Query 224 NQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG-YIVKSQHSGNAQ------ 276 + F L + N + FK P + + G I+ S +G+ + Sbjct 2 SDKTFEELGLTTWLVA-NCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAI 60 Query 277 --VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 + Q P A+I+ P+RELA Q ++ + ++IGG+ Q Sbjct 61 PILNQLSEDPYGVFAVILTPTRELAVQIGEQFNAIGAPMN---VNCSVVIGGIDNVTQAL 117 Query 335 VLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 +L+ I+V TPGRL ++ G K+ L +FLVLDEAD LL + + I + +P Sbjct 118 ILDKRPHIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEHLP- 176 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 ++ Q ++ SAT+ ++ KL ++ P + + DT+ + + T Sbjct 177 ---PPEKRQTLLFSATMTK-NLTKLDSIALNKPFIFEDNSKYDTVDTLKQEYIYMPAPT- 231 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 K Y V +K+H+ AI+F Sbjct 232 ---------------------------------------KDCYLVYILKKHEGSSAIVFV 252 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 + ++ + V LH R L+ FK G V+ L+ TD Sbjct 253 NNCYAVEAVKGMLNKL---------DIPSVSLHSFLDQKSRLAALKTFKSGKVKVLVATD 303 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 VA+RG+DI V VIN L + ++Y+HR+GR R R G AIS + + + Sbjct 304 VASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFITPHDVSLIKGIEEI 363 Query 634 RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV-EPDIKVPVDEFDGKVT 689 K + +D +E HL+ V + + + +E ++ Sbjct 364 IKKQLELYKTDDDEVFRHLKEASTARKIVEIHLDEIEFGVKQKERRTERNELQKQLK 420 Score = 99.4 bits (246), Expect = 2e-20, Method: Composition-based stats. Identities = 26/110 (24%), Positives = 52/110 (47%), Gaps = 9/110 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E+G+ + +++ + P++IQA +IP IL G D++ +A+TGSGKT +F+IP++ Sbjct 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + E + + + ++ +A + C Sbjct 64 NQLSEDPY---------GVFAVILTPTRELAVQIGEQFNAIGAPMNVNCS 104 >sp|Q91VN6|DDX41_MOUSE Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus OX=10090 GN=Ddx41 PE=1 SV=2 Length=622 Score = 295 bits (755), Expect = 4e-89, Method: Composition-based stats. Identities = 99/444 (22%), Positives = 183/444 (41%), Gaps = 74/444 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ K++ I +K + + ++ + + ++ G Sbjct 181 KSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILS--------GRDMIGIAFTGSGKT 232 Query 267 VK-SQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIK---QFKKYIDNPKL 318 + + + Q K LP P LI+ PSRELA QT ++ + + +P L Sbjct 233 LVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLL 292 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 R L IGG++ ++Q+ + +GV ++V TPGRL DL+ ++L R+L LDEAD ++ Sbjct 293 RCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDM 352 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 G+ I + + + Q ++ SAT+ ++ ++ + P +++ + Sbjct 353 GFEGDIRTIFSYF------KGQRQTLLFSATMPK-KIQNFAKSALVKPVTINVGRAGAAS 405 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 V V V + K Y + Sbjct 406 LDVIQEVEYVKEEA----------------------------------------KMVYLL 425 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 +++ +IF K D D + +Y + +G V +HG + ER + + Sbjct 426 ECLQKTPP-PVLIFAEKKADVDAIHEYLLLKG---------VEAVAIHGGKDQEERTKAI 475 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 E F++G L+ TDVA++G+D + +VIN +P+E +NYVHRIGR GR+ G+A + Sbjct 476 EAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTF 535 Query 619 VAT-EKEKVWYHVCSSRGKGCYNT 641 + E V + + + Sbjct 536 INKACDESVLMDLKALLLEAKQKV 559 Score = 98.3 bits (243), Expect = 6e-20, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 1/102 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F EM I + +++ L PT IQ + IP IL G D++ A TGSGKT F++PV Sbjct 180 IKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPV 239 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 I E K K+ + + + + Sbjct 240 IMFCLEQEKRLPFSKR-EGPYGLIICPSRELARQTHGILEYY 280 >sp|Q4HZ42|DBP10_GIBZE ATP-dependent RNA helicase DBP10 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP10 PE=3 SV=1 Length=897 Score = 302 bits (773), Expect = 4e-89, Method: Composition-based stats. Identities = 123/533 (23%), Positives = 200/533 (38%), Gaps = 50/533 (9%) Query 209 GKDLGLAFEIPPHMKNQAL-----FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPD 263 +F ++K + + F A L N LK + F P A+ D Sbjct 60 ALQQAASFRKATNLKGRTVKKGGGFQAMGLNNNLLK-AITRKGFSVPTPIQRKAIPLILD 118 Query 264 GYIVKSQHSGNAQVTQTKFLPN-----------APKALIVEPSRELAEQTLNNIKQFKKY 312 + + T +P +ALI+ PSRELA QTL +K+F + Sbjct 119 RKDLVGMARTGSGKTAAFVIPMIEKLRAHSARFGTRALIMSPSRELAIQTLKVVKEFSR- 177 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ +L++GG + +Q + DIV+ TPGR L L+LS ++++V DEA Sbjct 178 --GTDLKCVLLVGGDSLEEQFGYMAANPDIVIATPGRFLHLKVEMSLDLSSIKYVVFDEA 235 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D L G++ + + + +P Q ++ SATL + V+ + + P+ V L Sbjct 236 DRLFEMGFAAQLTEILHALP------PSRQSLLFSATLPASLVE-FARAGLQDPSLVRLD 288 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 E V + V HI D + + G N+ + Sbjct 289 AEQKVSPDLESAFFAVKGAEKEG----SLLHILHDVIKMPVGSPEGVNNDSEKGSKKRKR 344 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 + EH IIF TK + L I G F+ ++G Sbjct 345 GADGGSGKPTEH---STIIFTATKHHVEYLANLLIYAG---------FAVSYVYGSLDQT 392 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 R+ +E F+ G L+ TDVAARGIDI + VIN P + + +VHR+GR RA + Sbjct 393 ARRIQVEDFRMGKTNILVVTDVAARGIDIPVLANVINFDFPPQPKVFVHRVGRTARAGQR 452 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL-LSEIEEHLNCTIS 671 G + SLV + GK + ++ + L +E H+ Sbjct 453 GWSYSLVRDTDAPYLIDLQLFLGKKLVVGQETKNPSFSEDVVVGALKRDPVEGHVEWFNK 512 Query 672 QVEPDIKVP----VDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 + + V K+ + +A S K +++ Q L Sbjct 513 SLHESEDINALRGVAVKAEKLYLRTRNSAASQSAKRSKELVGS--QGWTQLHP 563 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 32/108 (30%), Positives = 49/108 (45%), Gaps = 7/108 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IPLIL D++ A TGSGKT AF IP+I+ Sbjct 84 FQAMGLNNNLLKAITRKGFSVPTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVIPMIEK 143 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + T S + + F+ G+D C Sbjct 144 LRAHSARF-------GTRALIMSPSRELAIQTLKVVKEFSRGTDLKCV 184 >sp|A5DVM3|IF4A_LODEL ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=TIF1 PE=3 SV=1 Length=397 Score = 288 bits (737), Expect = 4e-89, Method: Composition-based stats. Identities = 110/426 (26%), Positives = 185/426 (43%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F LK ++ F +G E + + +++ D +G + + + Sbjct 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 + +ALI+ P+RELA Q N I Y++ + IGG + D + ++G Sbjct 85 IDENEKSTQALILAPTRELALQIKNVITSIGLYLN---VTVHASIGGTSMSDDIEAFKSG 141 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V IVVGTPGR+ D++ +V+ +LDEAD +LS G+ + I + +P+ T Sbjct 142 VQIVVGTPGRVFDMIERRYFRTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETT---- 197 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M+ P + +K ++ + + + V Sbjct 198 --QVVLLSATMP-QDVLEVTTKFMNNPVRILVKKDELTLEGIKQYFINVE---------- 244 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 ++ K + V + QA+IFC T+ Sbjct 245 -----------------------------VEDYKFDCLVDLYDSISVTQAVIFCNTRSKV 275 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L +Q +F+ +H D ER ++ F+ G R LI TD+ ARGI Sbjct 276 EFLTNKLREQ---------KFTVSAIHADLPQGERDTIMKEFRSGSSRILISTDLLARGI 326 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP K+NY+HRIGR GR R G+AI+ V + + + Y Sbjct 327 DVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDKDVGMMREIEK-----FY 381 Query 640 NTRLKE 645 +T++ E Sbjct 382 STQITE 387 Score = 93.3 bits (230), Expect = 6e-19, Method: Composition-based stats. Identities = 23/101 (23%), Positives = 44/101 (44%), Gaps = 9/101 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + E K Q + + + + ++ + Sbjct 85 IDENEKSTQ---------ALILAPTRELALQIKNVITSIGL 116 >sp|Q2U5A2|DHH1_ASPOR ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dhh1 PE=3 SV=1 Length=511 Score = 292 bits (747), Expect = 4e-89, Method: Composition-based stats. Identities = 111/425 (26%), Positives = 172/425 (40%), Gaps = 68/425 (16%) Query 213 GLAFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 GL FE +F A K + + +EE G L++A +G K+ Sbjct 46 GLEFEDFYIKRELMMGIFEAGFEKPSPI-----QEETIPVALTGRDILARAKNG-TGKTA 99 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + +ALI+ P+RELA QT + K K++ + ++ GG Sbjct 100 AFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHLG---INVMVTTGGTGLM 156 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D + L + V I+VGTPGR+ DL S G +LS+ V+DEAD LLS ++ I ++ + Sbjct 157 DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSF 216 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 P K QV++ SAT VK +K M P ++L ++ + V Sbjct 217 HP------KDRQVMLFSATFP-LIVKSFKDKHMRNPYEINLM-DELTLRGITQYYAFVEE 268 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K K + +++Q+I Sbjct 269 KQ----------------------------------------KVHCLNTLFSKLQINQSI 288 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IFC + + L + + G +SC H R + F+ G R L+ Sbjct 289 IFCNSTNRVELLAKKITELG---------YSCFYSHARMLQQHRNRVFHDFRNGVCRNLV 339 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Y + Sbjct 340 CSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKI 399 Query 631 CSSRG 635 G Sbjct 400 EQELG 404 Score = 97.5 bits (241), Expect = 6e-20, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 108 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + K T + + Sbjct 109 I---------NPKSTKTQALILVPTRELALQ 130 >sp|A5DDN0|SUB2_PICGU ATP-dependent RNA helicase SUB2 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=SUB2 PE=3 SV=3 Length=432 Score = 289 bits (740), Expect = 4e-89, Method: Composition-based stats. Identities = 104/437 (24%), Positives = 171/437 (39%), Gaps = 72/437 (16%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFV----------ALSKAPDGYIVKSQHSGNAQVTQTK 281 L EL G+ F+ P + V L +A G + K+ + + Q Sbjct 53 FLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSG-LGKTAVFVLSTLQQLD 111 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-- 339 +P L++ +RELA Q N +F KY+ P ++ + GG+ + L+N Sbjct 112 PVPGEITTLVICHTRELAYQIRNEYARFSKYM--PDVKTEVFYGGIPIAKDIEKLKNKDT 169 Query 340 -VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 IVV TPGRL LV + L+ V+ V+DE D +L + + R I + T Sbjct 170 CPHIVVATPGRLHALVEEKAIRLNNVKSFVIDECDKVLE---AIDMRRDVQDIFRNTPHQ 226 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWE 457 K QV++ SATL S +++ + +K M P + + E + + ++ K Sbjct 227 K--QVMMFSATL-SQEIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYLKLDEKE----- 278 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K + + +Q IIF ++ Sbjct 279 -----------------------------------KNRKLADLLDSLEFNQVIIFVKSTS 303 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + L + + F + +H ER + FK+ + R + TDV R Sbjct 304 RANELNKLLV---------ASNFPSIAVHSAMPQEERIARYKSFKEFNKRICVSTDVFGR 354 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GIDI + IN LP+E Y+HR+GR GR GLAIS V +++++ SR Sbjct 355 GIDIERINLAINYDLPNEADQYLHRVGRAGRFGTKGLAISFVGSKEDEEVLEKIQSRFDV 414 Query 638 CYNTRLKEDGGCTIWYN 654 +E + + N Sbjct 415 KITEFPEEGVDSSTYMN 431 Score = 79.4 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (43%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + + Sbjct 48 TGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTL 107 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + D G+ I + + + F+ Sbjct 108 QQL-----DPVPGEITTLVICH----TRELAYQIRNEYARFSK 141 >sp|Q2HEB0|PRP28_CHAGB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=PRP28 PE=3 SV=1 Length=705 Score = 297 bits (761), Expect = 4e-89, Method: Composition-based stats. Identities = 94/423 (22%), Positives = 163/423 (39%), Gaps = 75/423 (18%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL-----PNAPKALIVEPSRELAEQ 301 + ++ G +++ L + P ALI+ P+REL +Q Sbjct 301 PIAQQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLTEFNKNDGPYALILAPTRELVQQ 360 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL 361 ++F + I+GG + +Q L NG +I+V TPGRL D + L Sbjct 361 IETEARKFA---GPLGFTVVSIVGGHSLEEQAFALRNGAEIIVATPGRLVDCLERRLLVF 417 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG-------------------KRLQ 402 SQ ++++DEAD ++ QG+ + + ++ + +P + Q Sbjct 418 SQCCYIIMDEADRMIDQGFEEPLTKILDALPVANEKPDTEDAENSQLMSRYLGGKDRYRQ 477 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ +AT+ V+K+++K + P V + DTV V V+ + R Sbjct 478 TMMYTATMPPL-VEKIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVSGEDKR-------- 528 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 K I+F K +C+ + Sbjct 529 ------------------------------KRRLQEILNSGQFKPPVIVFVNIKRNCEMV 558 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + G +S V LHG + +R+ +L + G L+ TD+A RGID+ Sbjct 559 AKDIKSWG---------YSTVTLHGSKTQEQREASLASVRNGQANILVATDLAGRGIDVA 609 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V V+N +P + Y HRIGR GRA + G+AI+ + E V Y + K + Sbjct 610 DVSLVVNFNMPSSIEAYTHRIGRTGRAGKSGVAITFLGNEDSDVMYDLKQIISKSSISKV 669 Query 643 LKE 645 +E Sbjct 670 PEE 672 Score = 105 bits (261), Expect = 5e-22, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 45/103 (44%), Gaps = 1/103 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M +++E + + + VE + + PT IQ +IP+ D++ A TGSGKT AF +P+ Sbjct 268 MRSWAESNLPRRLLEIVENVGYDEPTPIQRAAIPIAQQARDLIGVAVTGSGKTAAFLLPL 327 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + E L E K + + FA Sbjct 328 LVYISE-LPPLTEFNKNDGPYALILAPTRELVQQIETEARKFA 369 >sp|A3LST5|SUB2_PICST ATP-dependent RNA helicase SUB2 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=SUB2 PE=3 SV=1 Length=433 Score = 289 bits (740), Expect = 4e-89, Method: Composition-based stats. Identities = 106/437 (24%), Positives = 171/437 (39%), Gaps = 72/437 (16%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFV----------ALSKAPDGYIVKSQHSGNAQVTQTK 281 L EL G+ F+ P + V L +A G + K+ + + Q Sbjct 54 FLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSG-LGKTAVFVLSTLQQLD 112 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-- 339 +P L++ +RELA Q N +F KY+ P ++ + GG + + L++ Sbjct 113 PVPGEISTLVICHTRELAYQIRNEYARFSKYM--PDVKTEVFYGGTPIKRDIEKLKSKDT 170 Query 340 -VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 IVV TPGRL LV+ + LS V+ V+DE D +L S + R I + T Sbjct 171 CPHIVVATPGRLHALVNEKAIRLSNVKSFVIDECDKVLE---SIDMRRDVQDIFRATPHQ 227 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWE 457 K QV++ SATL S +++ + +K M P + + E + + + K Sbjct 228 K--QVMMFSATL-SQEIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLEEKE----- 279 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K + + +Q IIF ++ Sbjct 280 -----------------------------------KNRKLSDLLDSLEFNQVIIFVKSTQ 304 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + L + F + +H ER + FK+ + R + TDV R Sbjct 305 RANELNKLLC---------SCNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGR 355 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GIDI + IN LP+E Y+HR+GR GR GLAISLV +++++ SR Sbjct 356 GIDIERINLAINYDLPNEADQYLHRVGRAGRFGTKGLAISLVGSKEDEEVLEKIQSRFDV 415 Query 638 CYNTRLKEDGGCTIWYN 654 +E + + N Sbjct 416 KITEFPEEGVDPSTYMN 432 Score = 79.0 bits (193), Expect = 4e-14, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (43%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + + Sbjct 49 TGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTL 108 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + D G+ I + + + F+ Sbjct 109 QQL-----DPVPGEISTLVICH----TRELAYQIRNEYARFSK 142 >sp|A4RBS3|SUB2_PYRO7 ATP-dependent RNA helicase SUB2 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=SUB2 PE=3 SV=1 Length=436 Score = 289 bits (740), Expect = 5e-89, Method: Composition-based stats. Identities = 104/416 (25%), Positives = 168/416 (40%), Gaps = 70/416 (17%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFVALSKA-PDGYIVKSQHSGNAQ--------VTQTKF 282 L EL G+ F+ P + + +A G I+ SG + + Q + Sbjct 57 FLLKPELLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEP 116 Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG--- 339 + L++ +RELA Q N +F KY+ P ++ + GG + +L+N Sbjct 117 VAGECSVLVMCHTRELAFQIRNEYNRFSKYM--PDIKTGVFFGGTPIQKDAELLKNKETH 174 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 I+VGTPGRL+ LV L LS VR VLDE D +L + R +I + T K Sbjct 175 PHIIVGTPGRLNALVRDKFLRLSSVRIFVLDECDKMLD---QIDMRRDVQEIFRATPQQK 231 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWER 458 QV++ SATL S ++K + +K M PT + + + V + K Sbjct 232 --QVMMFSATL-SDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKE------ 282 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K + + + +Q IIF ++ + Sbjct 283 ----------------------------------KNRKLNELLDDLQFNQVIIFVKSTLR 308 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 L++ + F + +H ER + + FK+ + R + TDV RG Sbjct 309 ATELDKLLRE---------CNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRG 359 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 IDI + IN +P + +Y+HR+GR GR GLA+S V +++K R Sbjct 360 IDIERINLAINYDMPADADSYLHRVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEKR 415 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + GGD++ A++G GKT F + + Sbjct 52 TGFRDFLLKPELLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTL 111 Query 62 QIV 64 Q V Sbjct 112 QQV 114 >sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana OX=3702 GN=RH42 PE=1 SV=2 Length=1166 Score = 306 bits (783), Expect = 6e-89, Method: Composition-based stats. Identities = 119/498 (24%), Positives = 197/498 (40%), Gaps = 109/498 (22%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 GL +I MK ++ L + ++K G K+ Sbjct 532 HQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMS--------GRDCIGVAKTGSG---KT 580 Query 270 QHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + K P + P L++ P+REL +Q ++I++F K + +R + + Sbjct 581 LGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLG---IRCVPVY 637 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYS 381 GG Q+S L+ G +IVV TPGR+ D++ S NL +V FLV+DEAD + G+ Sbjct 638 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFE 697 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I R+ I Q ++ SAT V+ L+ K+++ P + + G V + Sbjct 698 PQITRIIQNI------RPERQTVLFSATFP-RQVETLARKVLNKPVEIQVGGRSVVNKDI 750 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 +V V P++DR L WSE Sbjct 751 TQLV-EVRPESDRFLRLLELLG--------------------EWSEK------------- 776 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + ++F +++ CD L + I+ + C+ LHG + +R+ + F Sbjct 777 -----GKILVFVQSQEKCDALYRDMIK---------SSYPCLSLHGGKDQTDRESTISDF 822 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 K LI T VAARG+D+ + V+N P+ ++YVHR+GR GRA R G A++ ++ Sbjct 823 KNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 882 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 + K + + L + V D+K Sbjct 883 DDAKYAPDLVKA--------------------------------LELSEQPVPDDLKALA 910 Query 682 DEFDGKVTYGQKRAAGGG 699 D F KV G ++A G G Sbjct 911 DGFMVKVKQGIEQAHGTG 928 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 33/151 (22%), Positives = 64/151 (42%), Gaps = 20/151 (13%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + + G+ +I ++++++ P IQ +++P+I+ G D + A+TGSGKT F +P+++ Sbjct 531 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 590 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLCCQS 113 + KDQ + G I + + + F+ G G+ Q Sbjct 591 I----KDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQI 646 Query 114 REVKE-WHGCRATKGLMKGKHYYEVSCHDQG 143 E+K T G ++ C G Sbjct 647 SELKRGTEIVVCTPGR-----MIDILCTSSG 672 >sp|Q9UJV9|DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41 OS=Homo sapiens OX=9606 GN=DDX41 PE=1 SV=2 Length=622 Score = 295 bits (754), Expect = 6e-89, Method: Composition-based stats. Identities = 106/447 (24%), Positives = 185/447 (41%), Gaps = 86/447 (19%) Query 218 IPPHMKN--QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI---VKSQHS 272 IPP +K+ + FPA +L+ ++ P + G + S Sbjct 176 IPPPIKSFKEMKFPAAILRG------LKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGS 229 Query 273 GNAQ----------VTQTKFLP----NAPKALIVEPSRELAEQTLNNIK---QFKKYIDN 315 G + Q K LP P LI+ PSRELA QT ++ + + + Sbjct 230 GKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSS 289 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGL 375 P LR L IGG++ ++Q+ + +GV ++V TPGRL DL+ ++L R+L LDEAD + Sbjct 290 PLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRM 349 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 + G+ I + + + Q ++ SAT+ ++ ++ + P +++ Sbjct 350 IDMGFEGDIRTIFSYF------KGQRQTLLFSATMPK-KIQNFAKSALVKPVTINVGRAG 402 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + V V V + K Sbjct 403 AASLDVIQEVEYVKEEA----------------------------------------KMV 422 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 Y + +++ +IF K D D + +Y + +G V +HG + ER Sbjct 423 YLLECLQKTPP-PVLIFAEKKADVDAIHEYLLLKG---------VEAVAIHGGKDQEERT 472 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + +E F++G L+ TDVA++G+D + +VIN +P+E +NYVHRIGR GR+ G+A Sbjct 473 KAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIA 532 Query 616 ISLVAT-EKEKVWYHVCSSRGKGCYNT 641 + + E V + + + Sbjct 533 TTFINKACDESVLMDLKALLLEAKQKV 559 Score = 98.7 bits (244), Expect = 4e-20, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 1/102 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F EM I + +++ PT IQ + IP IL G D++ A TGSGKT F++PV Sbjct 180 IKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPV 239 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 I E K K+ + + + + Sbjct 240 IMFCLEQEKRLPFSKR-EGPYGLIICPSRELARQTHGILEYY 280 >sp|Q6BME5|SUB2_DEBHA ATP-dependent RNA helicase SUB2 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=SUB2 PE=3 SV=2 Length=435 Score = 289 bits (739), Expect = 7e-89, Method: Composition-based stats. Identities = 106/437 (24%), Positives = 172/437 (39%), Gaps = 72/437 (16%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFV----------ALSKAPDGYIVKSQHSGNAQVTQTK 281 L EL G+ F+ P + V L +A G + K+ + + Q Sbjct 56 FLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSG-LGKTAVFVLSTLQQLD 114 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-- 339 +P L++ +RELA Q N +F KY+ P ++ + GG L L+N Sbjct 115 PVPGEISTLVICHTRELAYQIRNEYARFSKYM--PDVKTEVFYGGTPITRDLEKLKNKDT 172 Query 340 -VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 IVV TPGRL LV+ + L+ ++ V+DE D +L + + R I + T Sbjct 173 CPHIVVATPGRLHALVTEKSIRLNNIKSFVIDECDKVLE---AVDMRRDVQDIFRNTPHQ 229 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWE 457 K QV++ SATL S +++ + +K M P + + E + + ++ K Sbjct 230 K--QVMMFSATL-SQEIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLDEKE----- 281 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K + + +Q IIF R+ Sbjct 282 -----------------------------------KNRKLSDLLDSLEFNQVIIFVRSTQ 306 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + L + F + +H ER + + FK+ + R + TDV R Sbjct 307 RANELNKLLC---------SSNFPSIAVHSGLPQEERIERYKSFKEFNKRICVSTDVFGR 357 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GIDI + IN LP+E Y+HR+GR GR GLA+SLV+T+ ++ SR Sbjct 358 GIDIERINLAINYDLPNEADQYLHRVGRAGRFGTKGLAVSLVSTKDDEEVLEKIQSRFDV 417 Query 638 CYNTRLKEDGGCTIWYN 654 +E + + N Sbjct 418 KITEFPEEGVDPSTYMN 434 Score = 79.0 bits (193), Expect = 4e-14, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (43%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + + Sbjct 51 TGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTL 110 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + D G+ I + + + F+ Sbjct 111 QQL-----DPVPGEISTLVICH----TRELAYQIRNEYARFSK 144 >sp|A6RW79|PRP5_BOTFB Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=prp5 PE=3 SV=1 Length=1151 Score = 305 bits (782), Expect = 8e-89, Method: Composition-based stats. Identities = 106/482 (22%), Positives = 189/482 (39%), Gaps = 89/482 (18%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 GL + + ++ + + ++K G + Sbjct 560 GLDVKSLDVITKLGYERPTSIQMQAIPAIMS--------GRDVIGVAKTGSGKTIAFLLP 611 Query 273 GNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + L + P LI+ P+RELA Q K F K + LR + GG + Sbjct 612 MFRHIRDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMG---LRAVCAYGGAIIK 668 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 DQ++ L+ G +I+V TPGR+ +L++ NL +V ++VLDEAD + G+ + ++ Sbjct 669 DQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKV 728 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV- 446 N I Q I+ SAT+ + L++K + P + + G V + +V Sbjct 729 FNNI------RPNRQTILFSATMPRI-MDALAKKTLQSPVEIVVGGRSVVAPEITQIVEV 781 Query 447 -PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 K RL E LG+ + +D Sbjct 782 REEKEKFHRLLELLGELYNTDEDA------------------------------------ 805 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + +IF + D+L + +++G + C+ +HG + +R ++ FK G Sbjct 806 --RTLIFVDRQEKADDLLKDLMRKG---------YPCMSIHGGKDQVDRDSTIDDFKAGV 854 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +I T VAARG+D+ + V+N P+ ++YVHR GR GRA G A++ + E+E+ Sbjct 855 VPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQ 914 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + + + L+E+ + +V+ K F Sbjct 915 YSVGIAKALEQSGQEV--------------PDRLNEMRKSYK---DKVKSGAKKESSGFR 957 Query 686 GK 687 GK Sbjct 958 GK 959 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 50/107 (47%), Gaps = 4/107 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ + + ++ + PT IQ ++IP I+ G DV+ A+TGSGKT AF +P+ Sbjct 553 VQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLPM 612 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + +DQ+ K I + + + F Sbjct 613 FRHI----RDQRPLKGSDGPIGLIMTPTRELATQIHKECKPFLKAMG 655 >sp|A6RY31|DHH1_BOTFB ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dhh1 PE=3 SV=1 Length=538 Score = 292 bits (747), Expect = 8e-89, Method: Composition-based stats. Identities = 110/494 (22%), Positives = 181/494 (37%), Gaps = 75/494 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D + E+ + ++ + G L++A +G K Sbjct 49 FEDFSIKRELLMGIFEMGYEKPSPIQEEAIPVALT----------GRDILARAKNG-TGK 97 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + + LI+ P+RELA QT K +++ + ++ GG Sbjct 98 TAAFVIPALERINPKNTKVQCLILVPTRELALQTSQVCKTLGQHLG---INVMVTTGGTT 154 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L+ V I+VGTPGR+ DL +LS+ V+DEAD LLS ++ I ++ Sbjct 155 LRDDILRLQEPVHIIVGTPGRILDLAGKNVADLSECNMFVMDEADKLLSPEFTIVIEQLL 214 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 P K Q+++ SAT VK S+K M P ++L ++ + V Sbjct 215 QFHP------KDRQIMLFSATFP-MTVKDFSDKNMADPYEINLM-DELTLRGITQFYAFV 266 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K K + +++Q Sbjct 267 EEKE----------------------------------------KVHCLNTLFSKLQINQ 286 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 +IIFC + + L + + G +SC H R + F+ G R Sbjct 287 SIIFCNSTNRVELLAKKITELG---------YSCFYSHARMIQANRNRVFHDFRNGVCRN 337 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L++ E Y Sbjct 338 LVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLISWEDRFNLY 397 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE---PDIKVPVDEFD 685 ++ G + Y + + + Q D + P Sbjct 398 NIERELGTEIAPIPQIIPKNLYV-YETPENIPRPVSNFQTNTRQASGPGRDQQQPTQHSG 456 Query 686 GKVTYGQKRAAGGG 699 + T GQ G Sbjct 457 NQRTGGQYNNYNNG 470 Score = 101 bits (252), Expect = 4e-21, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 40/91 (44%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + EM + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP ++ Sbjct 49 FEDFSIKRELLMGIFEMGYEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALER 108 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + K + + Sbjct 109 I---------NPKNTKVQCLILVPTRELALQ 130 >sp|Q5QYF8|RHLB_IDILO ATP-dependent RNA helicase RhlB OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) OX=283942 GN=rhlB PE=3 SV=1 Length=425 Score = 288 bits (737), Expect = 8e-89, Method: Composition-based stats. Identities = 110/447 (25%), Positives = 179/447 (40%), Gaps = 68/447 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL L +I + + ++ L + ++ G + Sbjct 11 FADLALHPKIQQAISSAGFEYCTPIQALSLPVALSNRDVA--------GQAQTGTGKTLA 62 Query 269 SQHSGNAQVTQ---TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + ++ Q ++ + P+ALI+ P+RELA Q ++ ++ L+ +I G Sbjct 63 FLLATFNRLMQNESSEKTESGPRALIMAPTRELAIQIAHDADALIEHCG---LKMGVIYG 119 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G Q L DI+VGT GRL D +L + +VLDEAD + G+ D I Sbjct 120 GEGYEGQKEQLAAQPDILVGTTGRLIDFYKQDLFSLKDIEVVVLDEADRMFDLGFIDDIR 179 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + ++P D + ++ SATL S+ V++L+ + M+ PT ++++ V Sbjct 180 YLLQKMP----DPSKRLNLLFSATL-SYRVQELAYEHMNAPTKLEVEPLQKTATRVT--- 231 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 E K K + I+E Sbjct 232 -------------------------------------EELFYPSKPEKFPLLLTLIEEDW 254 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 D+AI+F TK C+ + + + ++ L GD +R + LE F +G Sbjct 255 PDKAIVFANTKHGCEKVHGWLV---------ANEHRAGLLTGDVPQKKRLRILEDFAEGK 305 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + FL+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G AISL E Sbjct 306 LDFLVATDVAARGLHIPEVTHVYNFDLPDDCEDYVHRIGRTGRAGASGAAISLACEEYVY 365 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIW 652 + G T+ D + Sbjct 366 NLPAIEDYIGHTIPVTKYDGDALLSDL 392 Score = 96.0 bits (237), Expect = 1e-19, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 117/352 (33%), Gaps = 55/352 (16%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++ + P+I QA+ + T IQA S+P+ L DV A+TG+GKT AF + Sbjct 9 TRFADLALHPKIQQAISSAGFEYCTPIQALSLPVALSNRDVAGQAQTGTGKTLAFLLATF 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + + ++ + + + + + + E G Sbjct 69 NRLMQNESSEKTE---SGPRALIMAPTRELAIQ--------------IAHDADALIEHCG 111 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 + G++ G YE Q + +GT + D Sbjct 112 LK--MGVIYGGEGYEGQKEQL--------AAQPDILVGTTG--------------RLIDF 147 Query 182 YGEE-FTMHDTIGCYLDIDKG--HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAEL 238 Y ++ F++ D LD + F + + L P N + EL Sbjct 148 YKQDLFSLKDIEVVVLDEADRMFDLGFIDDIRYLLQKMPDPSKRLNLLFSATLSYRVQEL 207 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 + K + ++ + S+ + KA++ ++ Sbjct 208 AYEHMNAPTKLEVEPLQKTATRVTEELFYPSKPEKFPLLLTLIEEDWPDKAIVFANTK-- 265 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ + R L+ G V + +L +LE+ +D +V T Sbjct 266 -----HGCEKVHGWLVANEHRAGLLTGDVPQKKRLRILEDFAEGKLDFLVAT 312 >sp|Q4IJH1|DBP3_GIBZE ATP-dependent RNA helicase DBP3 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP3 PE=3 SV=1 Length=581 Score = 293 bits (750), Expect = 8e-89, Method: Composition-based stats. Identities = 103/381 (27%), Positives = 169/381 (44%), Gaps = 44/381 (12%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 + +++ G + ++ K KA++V P+RELA QT +Q Sbjct 198 GRDVIGVAETGSGKTMAFALPCVEAISALKHK--HTKAVVVSPTRELAMQTY---EQMAS 252 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 +++ + + GG + DQ ++L G DI+V TPGRL D +S G ++LS F VLDE Sbjct 253 VAALNRMKCVCLYGGASKDDQRNLLNRGADIIVATPGRLKDFMSDGTVDLSHSAFAVLDE 312 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD +L +G+ + I + + P ++ Q ++ +AT V+ L+ M P + + Sbjct 313 ADRMLDKGFEEDIKMILSSCP----PREKRQTLMFTATWP-QSVQTLAATFMVSPVKIAI 367 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 +T L + + V + E+ E + Sbjct 368 GS--------------GGKETAGGAVELQANARISQSVEVLEPRGKEFRLLEVLKEHQQG 413 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K K D+ ++FC K + +E + ++G +HGD + Sbjct 414 SK-----------KNDRILVFCLYKKEATRIENFLSRKG---------IRVGGIHGDLRQ 453 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R ++LE FK G L+ TDVAARG+DI V VINVT P ++YVHRIGR GRA + Sbjct 454 EQRTRSLEAFKSGQTPVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVHRIGRTGRAGK 513 Query 612 MGLAISLVATEKEKVWYHVCS 632 G AI+ E + + + Sbjct 514 TGQAITFFTVEDKSHSGSLVN 534 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 19/124 (15%) Query 20 MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKT 79 ++ PT IQ+ S P L G DV+ AETGSGKT AF++P ++ + K K Sbjct 179 ANYKAPTPIQSASWPFTLSGRDVIGVAETGSGKTMAFALPCVEAIS--------ALKHKH 230 Query 80 TIKTGASVLNKWQMNPYDRGSAFAI--GSDGLCCQSREVKEWHG---------CRATKGL 128 T S + M Y++ ++ A +C K+ AT G Sbjct 231 TKAVVVSPTRELAMQTYEQMASVAALNRMKCVCLYGGASKDDQRNLLNRGADIIVATPGR 290 Query 129 MKGK 132 +K Sbjct 291 LKDF 294 >sp|Q9LFN6|RH56_ARATH DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 PE=1 SV=2 Length=427 Score = 288 bits (737), Expect = 9e-89, Method: Composition-based stats. Identities = 101/382 (26%), Positives = 163/382 (43%), Gaps = 58/382 (15%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G + +A G K+ + + Q + P AL++ +RELA Q N +F Y+ Sbjct 83 GMDVICQAKSGM-GKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYL 141 Query 314 DNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P + + GGV + +L+N IVVGTPGR+ L L+L VR +LDE Sbjct 142 --PDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDEC 199 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L S + R +I ++T K QV++ SATL S +++ + +K M P + + Sbjct 200 DKMLE---SLDMRRDVQEIFKMTPHDK--QVMMFSATL-SKEIRPVCKKFMQDPMEIYV- 252 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 +D T+H +V + + + ++ Sbjct 253 -DDEAKLTLHGLV-------------------------------------QHYIKLSEME 274 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + +Q +IF ++ L + ++ F +C+H Sbjct 275 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE---------CNFPSICIHSGMSQE 325 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER + FK+G R L+ TD+ RGIDI V VIN +PD Y+HR+GR GR Sbjct 326 ERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 385 Query 613 GLAISLVATEKEKVWYHVCSSR 634 GLAI+ VA+ + + R Sbjct 386 GLAITFVASASDSEVLNQVQER 407 Score = 80.6 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 38/67 (57%), Gaps = 0/67 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DV+ A++G GKT F + + Sbjct 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105 Query 62 QIVYETL 68 Q + + Sbjct 106 QQIEPSP 112 >sp|Q56XG6|RH15_ARATH DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 PE=1 SV=3 Length=427 Score = 288 bits (737), Expect = 9e-89, Method: Composition-based stats. Identities = 101/382 (26%), Positives = 163/382 (43%), Gaps = 58/382 (15%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G + +A G K+ + + Q + P AL++ +RELA Q N +F Y+ Sbjct 83 GMDVICQAKSGM-GKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYL 141 Query 314 DNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P + + GGV + +L+N IVVGTPGR+ L L+L VR +LDE Sbjct 142 --PDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDEC 199 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L S + R +I ++T K QV++ SATL S +++ + +K M P + + Sbjct 200 DKMLE---SLDMRRDVQEIFKMTPHDK--QVMMFSATL-SKEIRPVCKKFMQDPMEIYV- 252 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 +D T+H +V + + + ++ Sbjct 253 -DDEAKLTLHGLV-------------------------------------QHYIKLSEME 274 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + +Q +IF ++ L + ++ F +C+H Sbjct 275 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVE---------CNFPSICIHSGMSQE 325 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER + FK+G R L+ TD+ RGIDI V VIN +PD Y+HR+GR GR Sbjct 326 ERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTK 385 Query 613 GLAISLVATEKEKVWYHVCSSR 634 GLAI+ VA+ + + R Sbjct 386 GLAITFVASASDSEVLNQVQER 407 Score = 80.6 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 38/67 (57%), Gaps = 0/67 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DV+ A++G GKT F + + Sbjct 46 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL 105 Query 62 QIVYETL 68 Q + + Sbjct 106 QQIEPSP 112 >sp|A1CYG5|DBP5_NEOFI ATP-dependent RNA helicase dbp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp5 PE=3 SV=1 Length=489 Score = 290 bits (742), Expect = 9e-89, Method: Composition-based stats. Identities = 116/519 (22%), Positives = 202/519 (39%), Gaps = 113/519 (22%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + KN +DLGL I + N ++ L V Sbjct 69 PNNPLYSVKNFEDLGLDPRILKGLSNMNFRKPSKIQERALPLLLNNPP------KNLVGQ 122 Query 259 SKAPDGYIVKSQHSGNAQVTQ-TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 S++ G + ++V T+ + P+ALI+ P+RELA Q L ++ +++D Sbjct 123 SQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDG-- 180 Query 318 LRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 LIIG D+ S + IVVGTPG + D++ ++++ LVLDEAD +L Sbjct 181 ----LIIGAAVPTDRDSRPKRLECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEADNML 236 Query 377 S-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 QG D R+ +P + +QV++ SAT V + + K + L+ E+ Sbjct 237 DQQGLGDQCIRVKALLP------RDIQVVLFSATFPEH-VHQYASKFAPNANEITLQHEE 289 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + + + D+ + + T Sbjct 290 LTVEGIKQLYLDCADGEDKYKTLVQLYGLLT----------------------------- 320 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + +IIF +T+ +E+ +G + V L G+R P R Sbjct 321 ----------VGSSIIFVQTRAAAQEIEKRMTAEG---------HTVVSLTGERDPSVRD 361 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIG 604 +++F++G+ + LI T+V ARGID+ V VIN +P+ + Q Y+HRIG Sbjct 362 AIIDQFRRGEAKVLIATNVLARGIDVSTVSMVINYDIPELHQPSVPGRQADFQTYLHRIG 421 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 R GR R+G++IS V+ +E ++L++I+ Sbjct 422 RTGRFGRVGVSISFVSNREE-------------------------------WEMLNQIQT 450 Query 665 HLNCTISQVE-PDIKVPVDEFDGKVTYGQKRAAGGGSYK 702 + NC I +V+ D D + + G + Sbjct 451 YFNCEIQRVDTKDWDEVEDIIKKTIKNSRANPKFAGGKE 489 Score = 87.5 bits (215), Expect = 8e-17, Method: Composition-based stats. Identities = 24/116 (21%), Positives = 50/116 (43%), Gaps = 7/116 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F ++G+ P I + + M++ P+ IQ ++PL+L +++ +++G+GKT AF + Sbjct 76 VKNFEDLGLDPRILKGLSNMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVL 135 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 + V + + Q KT + + DGL + Sbjct 136 NALSRVDLSTEQMQ-----KTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAA 186 >sp|A6R603|SUB2_AJECN ATP-dependent RNA helicase SUB2 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=SUB2 PE=3 SV=2 Length=442 Score = 288 bits (738), Expect = 9e-89, Method: Composition-based stats. Identities = 98/381 (26%), Positives = 163/381 (43%), Gaps = 61/381 (16%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 L +A G + K+ + Q + +P L++ +RELA Q N +F KY+ Sbjct 98 DVLCQAKSG-LGKTAVFVLTTLHQLEPVPGECSILVMCHTRELAYQIKNEYARFSKYL-- 154 Query 316 PKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P ++ + GG + + +L + IVVGTPGRL+ LV KL+L ++ VLDE Sbjct 155 PDVKTAVFYGGTPMQKDIELLSSKDTYPSIVVGTPGRLNALVRDKKLSLRNIKAFVLDEC 214 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L + R +I + T K QV++ SATL S +V+ + +K M P V + Sbjct 215 DKMLD---QIDMRRDVQEIFRATPADK--QVMMFSATL-SQEVRPICKKFMRNPLEVYVD 268 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + + L + +I+ + Sbjct 269 DDTKL-----------------TLHGLLQYYIKLGESE---------------------- 289 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + + +Q IIF ++ L++ + F + +H Sbjct 290 KNRKLNELLDSLEFNQVIIFVKSTQRASELDKLLRE---------CNFPSIAVHSGVSQE 340 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER + + FK+ + R + TDV RGIDI + IN LP + +Y+HR+GR GR Sbjct 341 ERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTK 400 Query 613 GLAISLVATEKE-KVWYHVCS 632 GLAIS V++E++ +V + Sbjct 401 GLAISFVSSEQDQEVLKDIEK 421 Score = 71.3 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (51%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 59 TGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTL 118 Query 62 QIV 64 + Sbjct 119 HQL 121 >sp|A3GFI4|IF4A_PICST ATP-dependent RNA helicase eIF4A OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=TIF1 PE=3 SV=1 Length=397 Score = 287 bits (734), Expect = 9e-89, Method: Composition-based stats. Identities = 107/426 (25%), Positives = 183/426 (43%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F LK ++ F +G E + + +++ D +G + + + Sbjct 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 + +ALI+ P+RELA Q N I Y++ + IGG + +D + +G Sbjct 85 IDENEKSTQALILAPTRELALQIKNVITSIGLYLN---VTVHASIGGTSMQDDIEAFRSG 141 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 V +VVGTPGR+ D++ +V+ ++DEAD +LS G+ + I + +P+ T Sbjct 142 VQVVVGTPGRVFDMIERRYFKTEKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETT---- 197 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M+ P + +K ++ + + + V Sbjct 198 --QVVLLSATMP-QDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVE---------- 244 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 ++ K + + QA+IFC T+ Sbjct 245 -----------------------------LEDYKFDCLCDLYDSISVTQAVIFCNTRSKV 275 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L K F+ +H D ER ++ F+ G R LI TD+ ARGI Sbjct 276 EFLTTKL---------KAENFTVSAIHADLPQAERDTIMKEFRSGSSRILIATDLLARGI 326 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP K+NY+HRIGR GR R G+AI+ V + + + Y Sbjct 327 DVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGVAINFVTERDVGMMREI-----EQFY 381 Query 640 NTRLKE 645 +T+++E Sbjct 382 STQIEE 387 Score = 93.3 bits (230), Expect = 6e-19, Method: Composition-based stats. Identities = 25/132 (19%), Positives = 50/132 (38%), Gaps = 13/132 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + P I + + + P+ IQ +I I G DVL A++G+GKT F+I +Q Sbjct 25 FDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQR 84 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS----AFAIGSDGLCCQSREVKEW 119 + E K Q + + + + + + + + Sbjct 85 IDENEKSTQ---------ALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDI 135 Query 120 HGCRATKGLMKG 131 R+ ++ G Sbjct 136 EAFRSGVQVVVG 147 >sp|Q54KG1|DDX41_DICDI Probable ATP-dependent RNA helicase ddx41 OS=Dictyostelium discoideum OX=44689 GN=ddx41 PE=1 SV=1 Length=671 Score = 295 bits (756), Expect = 1e-88, Method: Composition-based stats. Identities = 110/482 (23%), Positives = 192/482 (40%), Gaps = 80/482 (17%) Query 226 ALFPACVLKNAELKFNF--GEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL 283 F + + G ++ G + D + SG V + Sbjct 222 TTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPMV 281 Query 284 P--------------NAPKALIVEPSRELAEQTLNNIKQFK----KYIDNPKLRELLIIG 325 P LI+ PSRELA QT + + F K +P+LR LL IG Sbjct 282 LFALEEECKLPIIQGEGPFGLILCPSRELARQTYDLVNSFTNALHKNGGHPQLRTLLAIG 341 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G+ R+Q + + GV +++ TPGRL DL++ K+N ++L LDEAD L+ G+ D I Sbjct 342 GIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLGFEDDIR 401 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + + Q ++ SAT+ +++ + + P V++ + V V Sbjct 402 SVLDNF------TNQRQTLLFSATMPK-KIQEFARSALVLPVEVNVGRAGAANLNVTQEV 454 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V P+ K Y + +++ Sbjct 455 EFVKPEA----------------------------------------KIVYLLECLQKTP 474 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IFC K D D++ +Y + + Q V +HGD+ ER+ ++ F++G Sbjct 475 P-PVLIFCENKKDVDDIYEYLLLK---------QVEAVSIHGDKSQDERESAIKAFREGK 524 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TDVA++G+D + +VIN +P E +NY+HRIGR GR G+A + + + Sbjct 525 KDVLVATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTGRRGNKGVATTFINKNNTE 584 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + + K ++ Q L ++++ T + D P + D Sbjct 585 ---SLLLDLKYLLIEAKQKVPPALLEIPDDNQYLQKLQDRNGNTGGGADDDDTKPCEYCD 641 Query 686 GK 687 G+ Sbjct 642 GR 643 Score = 94.4 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (44%), Gaps = 1/103 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F EM + + + E P+ IQ + +P+IL G D++ A TGSGKT F++P+ Sbjct 221 ITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKTLVFTLPM 280 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + E +G+ + YD ++F Sbjct 281 VLFALEEECKL-PIIQGEGPFGLILCPSRELARQTYDLVNSFT 322 >sp|Q5Z6G5|RH35B_ORYSJ DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0697200 PE=3 SV=1 Length=619 Score = 294 bits (752), Expect = 1e-88, Method: Composition-based stats. Identities = 121/513 (24%), Positives = 203/513 (40%), Gaps = 78/513 (15%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 S++ DL L I ++ + + ++ L + ++ G Sbjct 172 SRSFGDLRLPEPILRALRGKGIEKPTPIQVQGLPVALS--------GRDMIGIAFTGSGK 223 Query 266 IVKSQHSGNAQVTQTKFLPN-----APKALIVEPSRELAEQTLNNIKQFKKYI---DNPK 317 + Q + L P LIV PSRELA QT I+ F + P+ Sbjct 224 TLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELARQTHEVIEMFLAPLMEAGYPE 283 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 +R LL IGGV R Q+ V++ GV IVV TPGRL DL+S K+NL R+L LDEAD L+ Sbjct 284 IRPLLCIGGVDMRTQMEVVKKGVHIVVATPGRLKDLLSKKKMNLDNCRYLTLDEADRLVD 343 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 G+ D I + + + Q ++ SAT+ ++ ++ + P V++ + Sbjct 344 LGFEDDIREVFDHF------KAQRQTLLFSATMP-EKIQNFAKSALVKPIIVNVGRAGAA 396 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 V V V + + Y Sbjct 397 NLDVIQEVEYVKEEARII----------------------------------------YL 416 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 + +++ ++FC K D D ++++ + +G V +HG + ERK Sbjct 417 LECLQKTPP-PVLVFCEHKADVDYIQEFLLLKG---------VEAVAIHGGKDDEERKDA 466 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 + FK + L+ TDVA++G+DI + +VIN +P E +NYVHRIGR GR + G+A + Sbjct 467 FKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIENYVHRIGRTGRRGKTGVATT 526 Query 618 LVATEK-EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI--SQVE 674 + + E + + ++ +++ C Sbjct 527 FINKNQTETTLLDLKQLLIESKQRLPPILADLDDPQEDDKVAIAQQSGVKGCAFCGGLGH 586 Query 675 PDIKVPVDEFDGKVTYGQKRAA--GGGSYKGHV 705 P + VT + R+ GGG Y+G + Sbjct 587 RIEACPKQQLQNSVTLARARSDYFGGGGYRGEI 619 Score = 93.7 bits (231), Expect = 1e-18, Method: Composition-based stats. Identities = 23/101 (23%), Positives = 41/101 (41%), Gaps = 1/101 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++ + I +A+ PT IQ + +P+ L G D++ A TGSGKT F +P+I Sbjct 173 RSFGDLRLPEPILRALRGKGIEKPTPIQVQGLPVALSGRDMIGIAFTGSGKTLVFVLPLI 232 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + G+ + ++ F Sbjct 233 MAALQEE-ILMPIVPGEGPFGLIVCPSRELARQTHEVIEMF 272 >sp|A4QYM6|DRS1_PYRO7 ATP-dependent RNA helicase DRS1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DRS1 PE=3 SV=1 Length=790 Score = 298 bits (763), Expect = 1e-88, Method: Composition-based stats. Identities = 111/486 (23%), Positives = 187/486 (38%), Gaps = 75/486 (15%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 D +KG+ F I + + +++ + V Sbjct 249 DTNKGNASFQSMSLSRP----ILRGLTSVGFAKPTPIQSKTIPIAL--------MGKDVV 296 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 + G ++ + +I+ P+RELA Q + + D Sbjct 297 GGAVTGSGKTAAFVVPILERLLYRPKKVPTSRVVILAPTRELAIQCHAVATKLASHTD-- 354 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGL 375 ++ L +GG++ + Q S L D+++ TPGR +D + ++ + V LVLDEAD + Sbjct 355 -IKFCLAVGGLSLKVQESELRLRPDVIIATPGRFIDHMRNSASFAVDTVEILVLDEADRM 413 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L G++D +N + +P K Q ++ SAT+ S V L ++ P + + + Sbjct 414 LEDGFADELNEILTTLP------KSRQTMLFSATMTS-SVDNLIRVGLNKPVRLMVDSQK 466 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 T+ V + P + + Sbjct 467 KTVVTLTQEFVRLRPGREE-------------------------------------KRMG 489 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 Y V K ++ IIF R K + F G SC LHG +R Sbjct 490 YLVYLCKNLYTERVIIFFRQKKIAHHARIIFGLLG---------LSCAELHGSMSQIQRI 540 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 Q++E F+ G V FL+ TD+A+RG+DI GV VIN P + YVHR+GR RA R G A Sbjct 541 QSVEAFRDGKVSFLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRSGTA 600 Query 616 ISLVATEKEKVWYHVCSS--RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 I+L A KV + ++R+ + W + + E+E+ + + + Sbjct 601 ITLAAEPDRKVVKAAVKAGKAQGAKISSRIIDAADADSWQAK---IDELEDEVEAVMRE- 656 Query 674 EPDIKV 679 E + KV Sbjct 657 EKEEKV 662 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 6/106 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A+F M + I + + + + PT IQ+++IP+ L G DV+ A TGSGKT AF +P++ Sbjct 255 ASFQSMSLSRPILRGLTSVGFAKPTPIQSKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL 314 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + K K T+ + + + + + A +D Sbjct 315 ERLLYRPK------KVPTSRVVILAPTRELAIQCHAVATKLASHTD 354 >sp|Q8L7S8|RH3_ARATH DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH3 PE=1 SV=2 Length=748 Score = 297 bits (760), Expect = 2e-88, Method: Composition-based stats. Identities = 129/505 (26%), Positives = 213/505 (42%), Gaps = 89/505 (18%) Query 232 VLKNAELKFNFGEEEFKFPPK-DGFVALSKAPDGY---------IVKSQHSGNAQVTQTK 281 L+ + F + P G +++A G I+K T + Sbjct 116 SLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFR 175 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD 341 PK L++ P+RELA+Q IK+ P L + + GGV+ Q S L GVD Sbjct 176 RSGRLPKFLVLAPTRELAKQVEKEIKE-----SAPYLSTVCVYGGVSYTIQQSALTRGVD 230 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 +VVGTPGR+ DL+ L L +V +LVLDEAD +L+ G+ + + + +P + Sbjct 231 VVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPT------KR 284 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG--EDSVPDTVHHVVVPVNPKTDRLWERL 459 Q ++ SAT+ ++ VKKL+ K + P +DL G ++ + + + + + R Sbjct 285 QSMLFSATMPTW-VKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRT---- 339 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 IL V A K + I+F +TK D Sbjct 340 -------------------------------ILSDLITVYA----KGGKTIVFTQTKRDA 364 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 D + + + LHGD H+R++ L F++G L+ TDVA+RG+ Sbjct 365 DEVSLAL----------SNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGL 414 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 DI V VI+ LP++ + +VHR GR GRA + G AI + + +++ + R GC+ Sbjct 415 DIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLE--RDVGCH 472 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD--GKVTYGQKRAAG 697 + LL + + T++ V PD + F + Y +K Sbjct 473 FEFISP-------PTVGDLLESSADQVVATLNGVHPDS---IKFFSATAQKLYEEKGTDA 522 Query 698 GGSYKGHVDIL--APTVQELAALEK 720 + H+ P+ + L + EK Sbjct 523 LAAALAHLSGFSQPPSSRSLLSHEK 547 Score = 84.4 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 60/160 (38%), Gaps = 10/160 (6%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 S++ + + +++E+ IQ + L G D++ A+TG+GKT AF IP+I+ + Sbjct 105 SKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 164 Query 65 YETLKDQQEGKK-GKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 E D ++ G+ + + A +C Sbjct 165 TEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSA 224 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKF 163 T+G+ +V G R+ SL LG ++ Sbjct 225 LTRGV-------DVVVGTPG--RIIDLIEGRSLKLGEVEY 255 >sp|Q5ADL0|PRP5_CANAL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PRP5 PE=3 SV=1 Length=884 Score = 300 bits (768), Expect = 2e-88, Method: Composition-based stats. Identities = 115/506 (23%), Positives = 201/506 (40%), Gaps = 103/506 (20%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP--------------NAPKA 289 + +F+ P AL G V + T + LP P Sbjct 311 KLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIG 370 Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 LI+ P+RELA Q I F K +N LR GG + +Q++ L+ GV+I+VGTPGR Sbjct 371 LILSPTRELALQIEKEILNFTKRNNN--LRVCCCYGGSSIENQINELKKGVEIIVGTPGR 428 Query 350 LDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 + DL++ LNL + F+VLDEAD + G+ +N++ QI Q ++ Sbjct 429 VIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQI------RPDRQTVLF 482 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT ++ L+++I+ P + + G V + VV + + + + Sbjct 483 SATFP-RKMETLAKQILTDPVVIIVGGISVVAPEIKQEVVLFETSAEEQDKYKQQRVEKL 541 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 D+ EH + ++F + D D L Sbjct 542 HDILTNYQI---------------------------EHPDSKILVFTEKQNDADELVANL 574 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK--GDVRFLICTDVAARGIDIHGV 584 + +++ + +HG + +RK ++ F + LI T +AARG+D+ + Sbjct 575 L---------SNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGLDVRNL 625 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 VIN P+ ++YVHR+GR GRA G AI+ V++ + K +++ + Sbjct 626 GLVINFDPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVFNLVKA----------- 674 Query 645 EDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKG- 703 L + S ++P ++ ++F KV G+++ + G KG Sbjct 675 ---------------------LKLSHSDIDPKLEEIANKFVTKVKAGKEKISSGFGGKGL 713 Query 704 ------HVDILAPTVQELAALEKEAQ 723 + L Q + + Q Sbjct 714 DNLQEVRDNKLKLEKQRFGDQQPQRQ 739 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 59/378 (16%), Positives = 130/378 (34%), Gaps = 50/378 (13%) Query 1 MAAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S + + ++ + +++ + P+ IQ++++P IL G DV+ A+TGSGKT ++ +P Sbjct 292 ILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLP 351 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL---CCQSREV 116 +++ + DQQ K + I S + + F ++ L CC Sbjct 352 MLRHIQ----DQQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSS 407 Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHN 176 E KG+ E+ G + + L + F + + Sbjct 408 IENQINELKKGV-------EIIVGTPGRV-IDLLAANSGRVLNLKRCTFVVLDEADRMFD 459 Query 177 KQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA 236 F+ + + D+ V FS + Q L V+ Sbjct 460 LGFEPQVNKILTQ------IRPDRQTVLFSATF------PRKMETLAKQILTDPVVIIVG 507 Query 237 ELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSR 296 + F ++ D Y + + +T + K L+ Sbjct 508 GISVV---APEIKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQIEHPDSKILVFT--- 561 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN------GVDIVVGTPGRL 350 + N+ + + + K + I GG D+ ++ G++I++ T Sbjct 562 ----EKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIAT---- 613 Query 351 DDLVSTGKLNLSQVRFLV 368 ++ L++ + ++ Sbjct 614 --SIAARGLDVRNLGLVI 629 >sp|A5E3W5|SUB2_LODEL ATP-dependent RNA helicase SUB2 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=SUB2 PE=3 SV=1 Length=433 Score = 288 bits (736), Expect = 2e-88, Method: Composition-based stats. Identities = 105/437 (24%), Positives = 169/437 (39%), Gaps = 72/437 (16%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFV----------ALSKAPDGYIVKSQHSGNAQVTQTK 281 L EL G+ F+ P + V L +A G + K+ + + Q Sbjct 54 FLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSG-LGKTAVFVLSTLQQLD 112 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-- 339 + L++ +RELA Q N +F KY+ P ++ + GG + + L+N Sbjct 113 PVAGEISTLVICHTRELAYQIRNEYARFSKYM--PDVKTEVFYGGTPVKRDIEKLKNKDT 170 Query 340 -VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 IVV TPGRL LV + L+ V+ V+DE D +L S + R I + T Sbjct 171 CPHIVVATPGRLHALVQEKAIRLNNVKSFVIDECDKVLE---SLDMRRDVQDIFRATPHQ 227 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWE 457 K QV++ SATL S D++ + +K M P + + E + + + K Sbjct 228 K--QVMMFSATL-SQDIRPVCKKFMQNPLEIYVDDEAKLTLHGLQQYYIKLEEKE----- 279 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K + + +Q IIF ++ Sbjct 280 -----------------------------------KNRKLSDLLDSLEFNQVIIFVKSTQ 304 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + L + F + +H ER + + FK+ + R + TDV R Sbjct 305 RANELNKLLC---------ACNFPSIAVHSGLPQEERIERYKSFKEFNKRICVSTDVFGR 355 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GIDI + IN LP+E Y+HR+GR GR GL IS V+T++++ SR Sbjct 356 GIDIERINLAINYDLPNEADQYLHRVGRAGRFGTKGLGISFVSTKEDEEVLEKIQSRFDV 415 Query 638 CYNTRLKEDGGCTIWYN 654 +E + + N Sbjct 416 KITEFPEEGVDPSTYMN 432 Score = 77.5 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (43%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + + Sbjct 49 TGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTL 108 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + D G+ I + + + F+ Sbjct 109 QQL-----DPVAGEISTLVICH----TRELAYQIRNEYARFSK 142 >sp|Q9NQI0|DDX4_HUMAN Probable ATP-dependent RNA helicase DDX4 OS=Homo sapiens OX=9606 GN=DDX4 PE=1 SV=2 Length=724 Score = 296 bits (758), Expect = 2e-88, Method: Composition-based stats. Identities = 97/412 (24%), Positives = 163/412 (40%), Gaps = 69/412 (17%) Query 252 KDGFVALSKAPDGYIVKSQHSGNA-----QVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 +A ++ G A +T ++F P+ +IV P+REL Q Sbjct 325 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLE 384 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++F +R ++I GG + + G +I+ TPGRL D++ K+ L Q++ Sbjct 385 ARKFS---FGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIK 441 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH- 424 +LVLDEAD +L G+ + ++ + ++ Q ++ SAT ++++L+ + + Sbjct 442 YLVLDEADRMLDMGFGPEMKKLISC--PGMPSKEQRQTLMFSATFP-EEIQRLAAEFLKS 498 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 +V + V V+ V Sbjct 499 NYLFVAVGQVGGACRDVQQTVLQVG----------------------------------- 523 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 + K E V ++ ++ ++F TK D + + Q+ + S Sbjct 524 -----QFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQE---------KISTTS 569 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +HGDR+ ER+Q L F+ G L+ T VAARG+DI V +VIN LP YVHRIG Sbjct 570 IHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIG 629 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM 656 R GR G AIS E + + + W E+ Sbjct 630 RTGRCGNTGRAISFFDLESD-------NHLAQPLVKVLTDAQQDVPAWLEEI 674 Score = 105 bits (263), Expect = 3e-22, Method: Composition-based stats. Identities = 25/106 (24%), Positives = 46/106 (43%), Gaps = 0/106 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + + + T +Q SIP+IL G D++ A+TGSGKT AF +P+ Sbjct 287 ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPI 346 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + K+ + + + Y F+ G+ Sbjct 347 LAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGT 392 >sp|Q7S5D9|DHH1_NEUCR ATP-dependent RNA helicase dhh1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-10 PE=3 SV=3 Length=569 Score = 292 bits (747), Expect = 2e-88, Method: Composition-based stats. Identities = 104/401 (26%), Positives = 164/401 (41%), Gaps = 61/401 (15%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L++A +G K+ + + + + LI+ P+RELA QT K K++ Sbjct 82 GRDILARAKNG-TGKTAAFVIPALNKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL 140 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 + ++ GG RD + L++ V IVVGTPGR+ DL +LS+ ++DEAD Sbjct 141 G---INVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEAD 197 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LLSQ ++ I ++ P K QV++ SAT VK S+K M P ++L Sbjct 198 KLLSQEFTPVIEQLLQFHP------KDRQVMLFSATFP-LSVKDFSDKNMTSPYEINLM- 249 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 ++ + V K K Sbjct 250 DELTLRGITQYYAFVEEKQ----------------------------------------K 269 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + +++Q+IIFC + + L + + G +SC H Sbjct 270 VHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELG---------YSCFYSHAKMAQQA 320 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR +G Sbjct 321 RNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLG 380 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 LAI+L+ + Y++ G D ++ N Sbjct 381 LAINLINWDDRFNLYNIERDLGTEIQPIPQTIDKSLYVYEN 421 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 38/91 (42%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + + ++ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP + Sbjct 47 WEDFIHDRDLLMGIFEAGFEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALNK 106 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + + Q + M Sbjct 107 INPKVSKIQ---------CLILVPTRELAMQ 128 >sp|A1SZG4|RHLB_PSYIN ATP-dependent RNA helicase RhlB OS=Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37) OX=357804 GN=rhlB PE=3 SV=1 Length=418 Score = 287 bits (734), Expect = 2e-88, Method: Composition-based stats. Identities = 108/451 (24%), Positives = 172/451 (38%), Gaps = 73/451 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL L + + +Q ++ L ++ G + Sbjct 11 FADLPLEKSLISGLTSQGYEYCTPIQALSLPITL--------TGKDIAGQAQTGTGKTLA 62 Query 269 SQH------SGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 NAQ + N P+A+I+ P+RELA Q + LR L Sbjct 63 FLPAVFHHLLTNAQPENRR--KNQPRAIILAPTRELAIQIHKDAMVLA---SMSNLRLGL 117 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG Q + LE GVDI++GT GR D V G +++ ++ +VLDEAD + G+ Sbjct 118 AYGGEKVEIQRTKLEKGVDILIGTTGRTIDFVKQGVIDMGSIQSVVLDEADRMFDLGFIK 177 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 I + ++P+ K ++ SATL S V++L+ + M+ P + ++ E + Sbjct 178 DIRYLFRRMPEA----KSRLNMLFSATL-SHKVQELAFEHMNDPESIQIEPEVMTSVNIT 232 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 E K + I+ Sbjct 233 ----------------------------------------EELFYPSNQDKILLLLSLIE 252 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 E D+AI+F TK C+ + Y G L GD ++R + L++F Sbjct 253 EDWPDKAIVFANTKHTCEKVWGYLAGDGLRTGL---------LTGDVPQNKRLKILQQFT 303 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G++ L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA GLAIS + Sbjct 304 DGEIDILVATDVAARGLHIPKVSHVFNFDLPDDCEDYVHRIGRTGRAGEKGLAISFACEK 363 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + + ++ Sbjct 364 YVFNLPAIEEYIKHPIPCSEYDKNAMLDSLP 394 Score = 107 bits (266), Expect = 2e-23, Method: Composition-based stats. Identities = 62/356 (17%), Positives = 107/356 (30%), Gaps = 62/356 (17%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++ + + + + T IQA S+P+ L G D+ A+TG+GKT AF V Sbjct 9 TKFADLPLEKSLISGLTSQGYEYCTPIQALSLPITLTGKDIAGQAQTGTGKTLAFLPAVF 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD---GLCCQSREVKE 118 + Q E ++ + + + + A S+ GL E E Sbjct 69 HHLLTN--AQPENRRKNQPRAIILAPTRELAIQIHKDAMVLASMSNLRLGLAYG-GEKVE 125 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQ 178 + KG+ + +GT F G Sbjct 126 IQRTKLEKGV--------------------------DILIGTTGRTIDFVKQGV------ 153 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFEIPPHMK---NQALFPACVLK 234 M LD + F KD+ F P K N K Sbjct 154 -------IDMGSIQSVVLD--EADRMFDLGFIKDIRYLFRRMPEAKSRLNMLFSATLSHK 204 Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEP 294 EL F + + + + S + KA++ Sbjct 205 VQELAFEHMNDPESIQIEPEVMTSVNITEELFYPSNQDKILLLLSLIEEDWPDKAIVFAN 264 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ + ++ Y+ LR L+ G V +L +L+ +DI+V T Sbjct 265 TK-------HTCEKVWGYLAGDGLRTGLLTGDVPQNKRLKILQQFTDGEIDILVAT 313 >sp|A3LRW2|DBP3_PICST ATP-dependent RNA helicase DBP3 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP3 PE=3 SV=1 Length=526 Score = 290 bits (743), Expect = 2e-88, Method: Composition-based stats. Identities = 103/380 (27%), Positives = 165/380 (43%), Gaps = 60/380 (16%) Query 256 VALSKAPDGYIVKS-QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYID 314 + +++ G + N +T K + L + P+RELA Q +N+ Sbjct 157 IGVAETGSGKTFAFGVPAINNILTLGK---SGLSVLCISPTRELASQIYDNLVDL---TS 210 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 N ++ + + GGV DQ+ L+N ++VV TPGRL DL+ G +NL V +LVLDEAD Sbjct 211 NTNVKCVCVYGGVPKHDQVKNLKN-ANVVVATPGRLLDLIEDGAVNLGTVDYLVLDEADR 269 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 +L G+ D I + + + Q ++ +AT +V+KL+ M+ P V + Sbjct 270 MLETGFEDAIKAIIG-----GTKKENRQTLMFTATWP-QEVRKLASTFMNQPVKVSIGDR 323 Query 435 DS--VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 D + +V + P + K L Sbjct 324 DELAANKRITQIVEVIEP-----------------------------------FDKEKKL 348 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 G K D+ +IF K + +E + + ++ +HGD Sbjct 349 LGLLRQYQSGSKKNDKVLIFALYKKEATRIEGLLRR---------NSYNVAAIHGDLSQQ 399 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 +R L FKKG+ L+ TDVAARG+DI V VIN+T P ++YVHRIGR GRA + Sbjct 400 QRTNALNSFKKGESSLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQT 459 Query 613 GLAISLVATEKEKVWYHVCS 632 G A +L ++ + + + Sbjct 460 GTAHTLFTEHEKHLSGALMN 479 Score = 94.0 bits (232), Expect = 8e-19, Method: Composition-based stats. Identities = 36/139 (26%), Positives = 60/139 (43%), Gaps = 20/139 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++ + +I+ V + + PT IQ+ + P +L G DV+ AETGSGKT AF +P Sbjct 117 LLSFDQIQLNSKISAVVNK--FPTPTPIQSVAWPYLLSGKDVIGVAETGSGKTFAFGVPA 174 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 I + GK G + + S + YD ++ C Sbjct 175 INNIL------TLGKSGLSVLC--ISPTRELASQIYDNLVDLTSNTNVKCVCVYGGVPKH 226 Query 112 -QSREVKEWHGCRATKGLM 129 Q + +K + AT G + Sbjct 227 DQVKNLKNANVVVATPGRL 245 >sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=PRP5 PE=3 SV=1 Length=1072 Score = 303 bits (776), Expect = 2e-88, Method: Composition-based stats. Identities = 106/464 (23%), Positives = 189/464 (41%), Gaps = 94/464 (20%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLN 304 + ++K G V V + + P A+++ P+RELA Q Sbjct 435 PAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYK 494 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 + F K ++ +R +GG + + ++ ++ G ++V+ TPGR+ DL++ ++ V Sbjct 495 ECQPFLKVLN---IRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNV 551 Query 365 R---FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 R ++V+DEAD + G+ + ++ N + Q ++ SAT ++ L+ + Sbjct 552 RRTTYIVMDEADRMFDMGFEPQVMKIINNV------RPSAQKVLFSATFPKT-MESLARR 604 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVV--PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 I+ P + + G V + V + K RL E LG+ D Sbjct 605 ILVKPLEITVGGRSVVAPEIDQRVEVRDGDTKFTRLLEILGEMGEEHKDEDDF------- 657 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 + +IF + D+L + +Q+G Sbjct 658 ----------------------------RTLIFVDRQESADDLFRELLQRG--------- 680 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 + C LHG ++ +R + ++ FK GDV ++ T VAARG+D+ + VIN P+ ++Y Sbjct 681 YVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINYDAPNHMEDY 740 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 VHR GR GRA G I+ + E+E+ + + Sbjct 741 VHRAGRTGRAGNKGTCITFITPEQERFSVDIVRA-------------------------- 774 Query 660 SEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKG 703 L + + + D+K D F GK+ G+ RAAG G Y G Sbjct 775 ------LEASKAFIPDDLKKMSDSFLGKIKSGKARAAGSG-YSG 811 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 63/375 (17%), Positives = 119/375 (32%), Gaps = 54/375 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + G+ ++ W PT IQA++IP I+ G DV+ A+TGSGKT AF +P+ Sbjct 402 VRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPM 461 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG---SDGLCCQSREVK 117 ++ V +DQ+ + I S + Y F C + Sbjct 462 LRHV----RDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSIS 517 Query 118 EWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNK 177 E + KG EV G + T + + + + Sbjct 518 ED-----IAAMKKGA---EVVICTPGRM-IDLLTANNGRVTNVRRTTYIVMDEADRMFDM 568 Query 178 QFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE 237 F+ + + + V FS + + + L Sbjct 569 GFEPQVMKIINN------VRPSAQKVLFSATF------PKTMESLARRILVKP------- 609 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L+ G P D V + + ++ + + + LI +E Sbjct 610 LEITVGGRSVVAPEIDQRVEVRDGDTKFT--RLLEILGEMGEEHKDEDDFRTLIFVDRQE 667 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGTPGRLDDL 353 A+ + Q + GG D+ ++N V I+V T Sbjct 668 SADDLFRELLQ-------RGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVAT------S 714 Query 354 VSTGKLNLSQVRFLV 368 V+ L++ +++ ++ Sbjct 715 VAARGLDVKELKLVI 729 >sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=PRP5 PE=3 SV=1 Length=1072 Score = 303 bits (776), Expect = 2e-88, Method: Composition-based stats. Identities = 106/464 (23%), Positives = 189/464 (41%), Gaps = 94/464 (20%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLN 304 + ++K G V V + + P A+++ P+RELA Q Sbjct 435 PAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYK 494 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 + F K ++ +R +GG + + ++ ++ G ++V+ TPGR+ DL++ ++ V Sbjct 495 ECQPFLKVLN---IRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNV 551 Query 365 R---FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 R ++V+DEAD + G+ + ++ N + Q ++ SAT ++ L+ + Sbjct 552 RRTTYIVMDEADRMFDMGFEPQVMKIINNV------RPSAQKVLFSATFPKT-MESLARR 604 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVV--PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 I+ P + + G V + V + K RL E LG+ D Sbjct 605 ILVKPLEITVGGRSVVAPEIDQRVEVRDGDTKFTRLLEILGEMGEEHKDEDDF------- 657 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 + +IF + D+L + +Q+G Sbjct 658 ----------------------------RTLIFVDRQESADDLFRELLQRG--------- 680 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 + C LHG ++ +R + ++ FK GDV ++ T VAARG+D+ + VIN P+ ++Y Sbjct 681 YVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINYDAPNHMEDY 740 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 VHR GR GRA G I+ + E+E+ + + Sbjct 741 VHRAGRTGRAGNKGTCITFITPEQERFSVDIVRA-------------------------- 774 Query 660 SEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKG 703 L + + + D+K D F GK+ G+ RAAG G Y G Sbjct 775 ------LEASKAFIPDDLKKMSDSFLGKIKSGKARAAGSG-YSG 811 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 63/375 (17%), Positives = 119/375 (32%), Gaps = 54/375 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + G+ ++ W PT IQA++IP I+ G DV+ A+TGSGKT AF +P+ Sbjct 402 VRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPM 461 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG---SDGLCCQSREVK 117 ++ V +DQ+ + I S + Y F C + Sbjct 462 LRHV----RDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSIS 517 Query 118 EWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNK 177 E + KG EV G + T + + + + Sbjct 518 ED-----IAAMKKGA---EVVICTPGRM-IDLLTANNGRVTNVRRTTYIVMDEADRMFDM 568 Query 178 QFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE 237 F+ + + + V FS + + + L Sbjct 569 GFEPQVMKIINN------VRPSAQKVLFSATF------PKTMESLARRILVKP------- 609 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L+ G P D V + + ++ + + + LI +E Sbjct 610 LEITVGGRSVVAPEIDQRVEVRDGDTKFT--RLLEILGEMGEEHKDEDDFRTLIFVDRQE 667 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGTPGRLDDL 353 A+ + Q + GG D+ ++N V I+V T Sbjct 668 SADDLFRELLQ-------RGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVAT------S 714 Query 354 VSTGKLNLSQVRFLV 368 V+ L++ +++ ++ Sbjct 715 VAARGLDVKELKLVI 729 >sp|Q4P9P3|DRS1_USTMA ATP-dependent RNA helicase DRS1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DRS1 PE=3 SV=1 Length=932 Score = 300 bits (769), Expect = 2e-88, Method: Composition-based stats. Identities = 99/473 (21%), Positives = 186/473 (39%), Gaps = 35/473 (7%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + + + + +++ + + G V S +++ + + Sbjct 344 VLRALSSLSFHKPTPIQSRTIPIALAGK----DIVAGAVTGSGKTAAFMIPTIERLTWRA 399 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + LI+ P+RELA Q + K K+ D +R L +GG++ + Q + L+ Sbjct 400 KTRTPHEAKSRVLILAPTRELAIQCYSVGKSIAKFTD---IRFCLCVGGLSVKSQEAELK 456 Query 338 NGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 ++V+ TPGRL D V ++ L + LV+DEAD +L G++D +N + P+ Sbjct 457 LRPEVVIATPGRLIDHVRNSASFTLDDIEILVMDEADRMLEDGFADELNEIVKSCPKGA- 515 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 Q ++ SAT+ DV++L + P + + + + + V V Sbjct 516 ----RQTMLFSATMTD-DVEQLVRLSLKRPVRLFVDPKRTTAKKLIQEFVRVRGTGTGGV 570 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 D + + + + + Q +IF R+K Sbjct 571 AGADGLSGIQDQPATWISGGRKSEDAQ---------RPALLLSLCTRTFTSQTMIFVRSK 621 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 L+ F G S LHGD +R L F+ G FL+ TD+A+ Sbjct 622 KLAHQLKIVFGLLG---------LSAGELHGDLSQEQRIDALTDFRDGKTDFLLATDLAS 672 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RG+DI GV VIN +P + + Y+HR+GR RA R G A++LV ++ Sbjct 673 RGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLVGEADRRMLKLAIKKSSA 732 Query 637 GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVT 689 R+ + + L ++ ++ + + + + + + E + K Sbjct 733 EQIKHRIIPSAVAA---HMCETLERLKPEVDAVLREEKEEKALRIAEMELKKG 782 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 32/120 (27%), Positives = 55/120 (46%), Gaps = 5/120 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F + + +A+ + + PT IQ+ +IP+ L G D++ A TGSGKT AF IP I Sbjct 333 SSFGAFDLSRPVLRALSSLSFHKPTPIQSRTIPIALAGKDIVAGAVTGSGKTAAFMIPTI 392 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD---GLCCQSREVKE 118 + + K + + + + + + Y G + A +D LC VK Sbjct 393 ERLTWRAKTRTPHEAKSRVL--ILAPTRELAIQCYSVGKSIAKFTDIRFCLCVGGLSVKS 450 >sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0308500 PE=2 SV=1 Length=770 Score = 297 bits (760), Expect = 3e-88, Method: Composition-based stats. Identities = 104/428 (24%), Positives = 169/428 (39%), Gaps = 68/428 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ D G ++ + Q ++ L + ++K G Sbjct 219 KSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLS--------GRDIIGIAKTGSGKT 270 Query 267 VKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + L P ++ P+RELA Q K+F K + LR + Sbjct 271 AAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYN---LRVAAVY 327 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GGV+ DQ L+ G +IV+ TPGRL DL+ L + + +LVLDEAD + G+ I Sbjct 328 GGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQI 387 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + QI Q ++ SAT+ + V++L+ +I+ P V + S + + V Sbjct 388 RSIVGQI------RPDRQTLLFSATMP-YKVERLAREILTDPIRVTVGQVGSANEDIKQV 440 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + +++ L K DD Sbjct 441 VNVLPSDAEKMPWLLEKLPGMIDDGD---------------------------------- 466 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 ++F K D +E Q+G F LHGD+ R + L++FK G Sbjct 467 ----VLVFAAKKARVDEIESQLNQRG---------FRIAALHGDKDQASRMETLQKFKSG 513 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE-RMGLAISLVATEK 623 L+ TDVAARG+DI + V+N + E ++HRIGR GRA + G A +L+ ++ Sbjct 514 VYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKE 573 Query 624 EKVWYHVC 631 + + Sbjct 574 VRFAGELV 581 Score = 115 bits (288), Expect = 3e-25, Method: Composition-based stats. Identities = 30/104 (29%), Positives = 54/104 (52%), Gaps = 4/104 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F++ G ++ A+ + + PT IQ +++P++L G D++ A+TGSGKT AF +P+ Sbjct 218 IKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPM 277 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 I + DQ E +K + I + + Y FA Sbjct 278 IVHIM----DQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAK 317 >sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=PRP5 PE=3 SV=1 Length=1156 Score = 304 bits (778), Expect = 3e-88, Method: Composition-based stats. Identities = 100/432 (23%), Positives = 174/432 (40%), Gaps = 74/432 (17%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-----------APKAL 290 G A+ D V SG + P + Sbjct 494 LGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGI 553 Query 291 IVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRL 350 I+ P+RELA Q ++ F K + LR + GG +Q++ ++ DIVV TPGRL Sbjct 554 IMTPTRELAVQIYREMRPFIKALG---LRAACVYGGAPISEQIAEMKKTADIVVATPGRL 610 Query 351 DDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 DL++ NL +V +LVLDEAD + G+ + ++ N I Q ++ S Sbjct 611 IDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNI------RPDRQTVLFS 664 Query 408 ATLHSFDVKKLSEKIMHF-PTWVDLKGEDSVPDTVHHVVV--PVNPKTDRLWERLGKSHI 464 AT ++ L+ K++ P + + G V + +V + K RL E LG+ + Sbjct 665 ATFPKQ-MESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLEILGELYN 723 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R D + +IF + D+L + Sbjct 724 REKDA--------------------------------------RTLIFVDRQEAADDLLK 745 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 I++G + + LHG + +R + + FK G+V + T VAARG+D+ + Sbjct 746 DLIRKG---------YVTMSLHGGKDQVDRDETISDFKAGNVPIVTATSVAARGLDVKQL 796 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 VIN +P+ ++YVHR GR GRA + G I+ + E+++ + ++ + + Sbjct 797 KLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDIIAALKASAAHVPPE 856 Query 645 EDGGCTIWYNEM 656 + + ++ Sbjct 857 LEAMAASFKEKL 868 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 4/96 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S G+ ++ + + PT IQ++++P I+ G D++ A+TGSGKT AF +P+ Sbjct 475 LTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPM 534 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + KDQ+ + + + + + + Y Sbjct 535 FRHI----KDQRPVEPSEGPVGIIMTPTRELAVQIY 566 >sp|O13792|SUB2_SCHPO ATP-dependent RNA helicase uap56 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=uap56 PE=1 SV=3 Length=434 Score = 287 bits (734), Expect = 3e-88, Method: Composition-based stats. Identities = 101/405 (25%), Positives = 166/405 (41%), Gaps = 63/405 (16%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L +A G K+ + + Q + + L++ +RELA Q N +F KY+ Sbjct 88 GTDVLCQAKSGM-GKTAVFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYL 146 Query 314 DNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 P +R + GG+ + + ++ IVV TPGRL+ LV L ++ V+ VLD Sbjct 147 --PDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLD 204 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 E D LL S + R ++ + T K QV++ SATL S +++ + +K M P + Sbjct 205 ECDKLLE---SVDMRRDIQEVFRATPPQK--QVMMFSATL-SNEIRPICKKFMQNPLEIY 258 Query 431 LKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + E + V + K Sbjct 259 VDDETKLTLHGLQQHYVKLEEKA------------------------------------- 281 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K + + +Q +IF ++ + L++ + F +C+HG Sbjct 282 ---KNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRE---------CNFPSICIHGGL 329 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 ER + + FK D R + TDV RGIDI V VIN +PD +Y+HR+GR GR Sbjct 330 PQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRF 389 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 GLAI+ ++E++ R + T L ++ + N Sbjct 390 GTKGLAITFSSSEEDSQILDKIQERFE-VNITELPDEIDVGSYMN 433 Score = 79.4 bits (194), Expect = 3e-14, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 35/63 (56%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + G DVL A++G GKT F + + Sbjct 51 TGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTAVFVLSTL 110 Query 62 QIV 64 Q + Sbjct 111 QQI 113 >sp|A6RJA2|PRP28_BOTFB Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=prp28 PE=3 SV=1 Length=783 Score = 297 bits (760), Expect = 3e-88, Method: Composition-based stats. Identities = 96/458 (21%), Positives = 173/458 (38%), Gaps = 89/458 (19%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 +N + L + + ++ A + + ++ G Sbjct 380 RNWSESKLPKRLLDVIHQVGYDEPSAVQRAAIPIAL--------QARDLIGVAVTGSGKT 431 Query 267 VKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 +++ L + P A+I+ P+RELA+Q K+F + + Sbjct 432 AAFLLPLLVYISELPPLNEFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLG---FTCV 488 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 I+GG + +Q L NG +I++ TPGRL D + L L Q ++++DEAD ++ G+ Sbjct 489 SIVGGHSLEEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFE 548 Query 382 DFINRMHNQIP-------------------QVTSDGKRLQVIVCSATLHSFDVKKLSEKI 422 + +N++ + +P + + Q ++ +AT+ V+K+++K Sbjct 549 ESVNKILDALPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPA-VEKIAKKY 607 Query 423 MHFPTWVDLKGEDSVPDTVHHVVVPV---NPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 + P V + +TV V V + + RL E L Sbjct 608 LRRPAIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNEILASGEFAPP------------ 655 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 I+F K +CD + + G Sbjct 656 -----------------------------IIVFVNIKRNCDAVARDIKHMG--------- 677 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 F+ V LHG + +R+ L + G L+ TD+A RGID+ V V+N + ++Y Sbjct 678 FTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESY 737 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 HRIGR GRA + G+AI+ + E Y + K Sbjct 738 THRIGRTGRAGKSGVAITFLGNEDSDTMYDLKQMLTKS 775 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 45/111 (41%), Gaps = 1/111 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M +SE + + + ++ + P+ +Q +IP+ L D++ A TGSGKT AF +P+ Sbjct 379 MRNWSESKLPKRLLDVIHQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPL 438 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + + E L E K + + FA C Sbjct 439 LVYISE-LPPLNEFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLGFTCV 488 >sp|Q2UH00|PRP28_ASPOR Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=prp28 PE=3 SV=1 Length=803 Score = 297 bits (761), Expect = 3e-88, Method: Composition-based stats. Identities = 96/380 (25%), Positives = 164/380 (43%), Gaps = 70/380 (18%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q K K+ + + I+GG + +Q L NG +I++ Sbjct 444 DGPYAIVLAPTRELAQQIEIEAK---KFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIII 500 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP------------ 392 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P Sbjct 501 ATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEEAE 560 Query 393 -------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + + Q ++ +AT+ + V++++ K + P V + DTV V Sbjct 561 NSMAMSQHIGTKDRYRQTMMYTATMPTA-VERIARKYLRRPAIVTIGSAGEAVDTVEQRV 619 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + R R D+ + RP Sbjct 620 EFIAGEDKR--------KKRLGDILSSGEFRPP--------------------------- 644 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 I+F K +CD + + Q G FS V LHG + +R+ L + G Sbjct 645 ---IIVFVNIKRNCDAIAREIKQWG---------FSSVTLHGSKTQEQREAALASVRNGQ 692 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TD+A RGID+ V VIN + ++Y HRIGR GRA + G+AI+ + E Sbjct 693 TDVLVATDLAGRGIDVPDVSLVINFNMATTIESYTHRIGRTGRAGKSGVAITFLGNEDTD 752 Query 626 VWYHVCSSRGKGCYNTRLKE 645 V Y + K + +E Sbjct 753 VMYDLKQMIMKSSISRLPEE 772 Score = 108 bits (270), Expect = 4e-23, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V ++ + PT IQ +IP+ + D++ A TGSGKT +F +P+ Sbjct 366 MRSWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPL 425 Query 61 IQIVYETLK-DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + E + D+ E +K + + F Sbjct 426 LVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFT 469 >sp|Q4WIN6|DBP5_ASPFU ATP-dependent RNA helicase dbp5 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp5 PE=3 SV=2 Length=489 Score = 288 bits (738), Expect = 3e-88, Method: Composition-based stats. Identities = 115/518 (22%), Positives = 201/518 (39%), Gaps = 113/518 (22%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + KN +DLGL I + + ++ L V Sbjct 69 PNNPLYSVKNFEDLGLDPRILKGLSSMNFRKPSKIQERALPLLLNNPP------KNLVGQ 122 Query 259 SKAPDGYIVKSQHSGNAQVTQ-TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 S++ G + ++V T+ + P+ALI+ P+RELA Q L ++ +++D Sbjct 123 SQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDG-- 180 Query 318 LRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 LIIG D+ S + IVVGTPG + D++ ++++ LVLDEAD +L Sbjct 181 ----LIIGAAVPTDRDSRPKRLECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEADNML 236 Query 377 S-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 QG D R+ +P + +QV++ SAT V + + K + L+ E+ Sbjct 237 DQQGLGDQCIRVKALLP------RDIQVVLFSATFPEH-VHQYASKFAPNANEITLQHEE 289 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + + + D+ + + T Sbjct 290 LTVEGIKQLYLDCADGEDKYRTLVQLYGLLT----------------------------- 320 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + +IIF +T+ +E+ +G + V L G+R P R Sbjct 321 ----------VGSSIIFVQTRAAAQEIERRMTAEG---------HTVVSLTGERDPSVRD 361 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIG 604 +++F++G+ + LI T+V ARGID+ V VIN +P+ + Q Y+HRIG Sbjct 362 AIIDQFRRGEAKVLIATNVLARGIDVSTVSMVINYDIPELHQPNVPGRQADFQTYLHRIG 421 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 R GR R+G++IS V+ +E ++L++I+ Sbjct 422 RTGRFGRVGVSISFVSNREE-------------------------------WEMLNQIQT 450 Query 665 HLNCTISQVE-PDIKVPVDEFDGKVTYGQKRAAGGGSY 701 + NC I +V+ D D + + G Sbjct 451 YFNCEIQRVDTKDWDEVEDIIKKTIKNSRANPKFAGGK 488 Score = 87.5 bits (215), Expect = 9e-17, Method: Composition-based stats. Identities = 24/116 (21%), Positives = 50/116 (43%), Gaps = 7/116 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F ++G+ P I + + M++ P+ IQ ++PL+L +++ +++G+GKT AF + Sbjct 76 VKNFEDLGLDPRILKGLSSMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVL 135 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 + V + + Q KT + + DGL + Sbjct 136 NALSRVDLSTEQMQ-----KTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAA 186 >sp|Q64060|DDX4_RAT Probable ATP-dependent RNA helicase DDX4 OS=Rattus norvegicus OX=10116 GN=Ddx4 PE=1 SV=1 Length=713 Score = 295 bits (755), Expect = 3e-88, Method: Composition-based stats. Identities = 104/463 (22%), Positives = 174/463 (38%), Gaps = 69/463 (15%) Query 252 KDGFVALSKAPDGYIVKSQHSGNA-----QVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 +A ++ G A +T ++F P+ +IV P+REL Q Sbjct 310 GRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLE 369 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++F +R ++I GG + + G +I+ TPGRL D++ K+ L QV+ Sbjct 370 ARKFS---FGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVK 426 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH- 424 +LVLDEAD +L G+ + ++ + ++ Q ++ SAT ++++L+ + + Sbjct 427 YLVLDEADRMLDMGFGPEMKKLISC--PGMPSKEQRQTLLFSATFP-EEIQRLAGEFLKS 483 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 +V + V ++ V P Sbjct 484 NYLFVAVGQVGGACRDVQQSILQVGP---------------------------------- 509 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 + K V ++ ++ ++F TK D + + Q+ + S Sbjct 510 ------VFKKRKLVEILRNIGDERPMVFVETKKKADFIATFLCQE---------KISTTS 554 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +HGDR+ ER+Q L F+ G L+ T VAARG+DI V +VIN LP YVHRIG Sbjct 555 IHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVHRIG 614 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 R GR G AIS TE + + + W E+ S Sbjct 615 RTGRCGNTGRAISFFDTESD-------NHLAQPLVKVLSDAQQDVPAWLEEIAFSSYAPP 667 Query 665 HLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDI 707 + + F GK T + + D Sbjct 668 SFSNSTRGAVFASFDTRKNFQGKNTLNTAGISSAQAPNPVDDE 710 Score = 104 bits (260), Expect = 7e-22, Method: Composition-based stats. Identities = 24/106 (23%), Positives = 46/106 (43%), Gaps = 0/106 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + + + T +Q SIP++L G D++ A+TGSGKT AF +P+ Sbjct 272 ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPI 331 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + K+ + + + Y F+ G+ Sbjct 332 LAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT 377 >sp|Q75BL8|IF4A_EREGS ATP-dependent RNA helicase eIF4A OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=TIF1 PE=3 SV=1 Length=396 Score = 285 bits (730), Expect = 4e-88, Method: Composition-based stats. Identities = 106/426 (25%), Positives = 179/426 (42%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F LK L+ + +G + + + + + D +G A + + Sbjct 24 FDELKLKEVLLRGIYGYGFVDPSAIQQRAILPIIEGHDVLAQAQSGTGKTGTFSIAALQR 83 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 AP+ALI+ P+RELA Q + ++D ++ IGG R+ L G Sbjct 84 IDESIKAPQALILAPTRELALQIQKVVMALALHMD---VKVHACIGGTDPREDAEALRAG 140 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVVGTPGR+ D++ ++ +LDEAD +LS G+ + I ++ +P T Sbjct 141 AQIVVGTPGRVFDMIERRNFKTDHIKMFILDEADEMLSSGFKEQIYKIFTMLPPTT---- 196 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ +V +++K M+ P + +K + + + + V + + Sbjct 197 --QVVLLSATMPK-EVLDVTDKFMNKPVRILVKKDALTLEGIQQYYINVESEEYK----- 248 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 L Y + QA+IFC T+ Sbjct 249 -----------------------------YDCLSDLY-----DSISVTQAVIFCNTRRKV 274 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + F+ ++ D +R ++ F+ G R LI TD+ ARGI Sbjct 275 EELTKRLTDD---------SFTVSAIYSDLPQAQRDTIMKEFRTGSSRILISTDLLARGI 325 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP+ K+NY+HRIGR GR R G+AI+LV + + Y Sbjct 326 DVQQVSLVINYDLPNNKENYIHRIGRGGRFGRKGVAINLVTDRDVGDMREL-----ERFY 380 Query 640 NTRLKE 645 +T+++E Sbjct 381 STQIEE 386 Score = 92.9 bits (229), Expect = 9e-19, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 13/135 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E+ + + + + ++ P+ IQ +I I+ G DVL A++G+GKTG FSI Sbjct 21 VHKFDELKLKEVLLRGIYGYGFVDPSAIQQRAILPIIEGHDVLAQAQSGTGKTGTFSIAA 80 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD----GLCCQSREV 116 +Q + E++K Q + + + A A+ D + Sbjct 81 LQRIDESIKAPQ---------ALILAPTRELALQIQKVVMALALHMDVKVHACIGGTDPR 131 Query 117 KEWHGCRATKGLMKG 131 ++ RA ++ G Sbjct 132 EDAEALRAGAQIVVG 146 >sp|A5UDI1|RHLB_HAEIE ATP-dependent RNA helicase RhlB OS=Haemophilus influenzae (strain PittEE) OX=374930 GN=rhlB PE=3 SV=1 Length=415 Score = 286 bits (732), Expect = 4e-88, Method: Composition-based stats. Identities = 100/399 (25%), Positives = 166/399 (42%), Gaps = 62/399 (16%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPN----APKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + T PN P+ALI+ +RELA Q N+ + K Sbjct 51 GQAQTGTGKTMAFL-TATFHHLLTHQDPNLEYPHPRALILASTRELAVQISNDAEFLAKA 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL +E GVDI++GT GR+ D V G + L +++ +VLDEA Sbjct 110 CG---LKTALAYGGDGYDKQLQAIERGVDILIGTTGRVIDYVKQGVIGLDEIQVVVLDEA 166 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + + P + ++ SATL S+ V++L+ + M+ P +++++ Sbjct 167 DRMFDLGFIRDIRYLLRKCP----TPQVRLTMLFSATL-SYKVRELAFEDMNDPEYIEIE 221 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 E + E Sbjct 222 PEQKTGHRIK----------------------------------------EELFYPSNQD 241 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + +++ ++ I+F TK C+ + Y G L GD Sbjct 242 KMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADG---------HRVGLLTGDVAQK 292 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 +R L++F GD+ L+ TDVAARG+ I V +V N LPD++++YVHRIGR GRA Sbjct 293 KRLSLLKQFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGES 352 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 G++IS E + G ++ + + + Sbjct 353 GVSISFACEEYAMNLPAIEEYIGHSIPVSQYETEALLEL 391 Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats. Identities = 52/352 (15%), Positives = 111/352 (32%), Gaps = 59/352 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + P + + + + T IQA S+P+ L G DV A+TG+GKT AF Sbjct 11 FSDLSLHPIVRDTLAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKTMAFLTATFHH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + Q + + + + + + + + G + Sbjct 71 LLTH---QDPNLEYPHPRALILASTRELAVQISN--------------DAEFLAKACGLK 113 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ ++G+ + +GT + +Y Sbjct 114 TALAYGGDGYDKQLQAIERGV----------DILIGTT---------------GRVIDYV 148 Query 184 EEFTMH-DTIGCYLDIDKGHVKFSKNG----KDLGLAFEIPPHMKNQALFPACVLKNAEL 238 ++ + D I + +D+ F + L P K EL Sbjct 149 KQGVIGLDEIQVVV-LDEADRMFDLGFIRDIRYLLRKCPTPQVRLTMLFSATLSYKVREL 207 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 F + + + + S A + + ++ ++ Sbjct 208 AFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQDKMALLLTLMEDEWPERCIVFANTK-- 265 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ Y+ R L+ G VA + +LS+L+ +DI+V T Sbjct 266 -----HRCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQFTDGDLDILVAT 312 >sp|Q61496|DDX4_MOUSE ATP-dependent RNA helicase DDX4 OS=Mus musculus OX=10090 GN=Ddx4 PE=1 SV=2 Length=702 Score = 295 bits (754), Expect = 5e-88, Method: Composition-based stats. Identities = 97/428 (23%), Positives = 167/428 (39%), Gaps = 69/428 (16%) Query 252 KDGFVALSKAPDGYIVKSQHSGNA-----QVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 +A ++ G A +T ++F P+ +IV P+REL Q Sbjct 298 GRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLE 357 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++F +R ++I GG + + G +I+ TPGRL D++ K+ L QV+ Sbjct 358 ARKFS---FGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVK 414 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH- 424 +LVLDEAD +L G+ + ++ + ++ Q ++ SAT ++++L+ + Sbjct 415 YLVLDEADRMLDMGFGPEMKKLISC--PGMPSKEQRQTLLFSATFP-EEIQRLAGDFLKS 471 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 +V + V ++ V + R Sbjct 472 SYLFVAVGQVGGACRDVQQTILQVGQYSKR------------------------------ 501 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 E V ++ ++ ++F TK D + + Q+ + S Sbjct 502 ----------EKLVEILRNIGDERTMVFVETKKKADFIATFLCQE---------KISTTS 542 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +HGDR+ ER+Q L F+ G L+ T VAARG+DI V +VIN LP YVHRIG Sbjct 543 IHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIG 602 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 R GR G AIS T+ + + + W E+ + + Sbjct 603 RTGRCGNTGRAISFFDTDSD-------NHLAQPLVKVLSDAQQDVPAWLEEIAFSTYVPP 655 Query 665 HLNCTISQ 672 + + Sbjct 656 SFSSSTRG 663 Score = 104 bits (260), Expect = 7e-22, Method: Composition-based stats. Identities = 24/106 (23%), Positives = 46/106 (43%), Gaps = 0/106 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + + + T +Q SIP++L G D++ A+TGSGKT AF +P+ Sbjct 260 ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPI 319 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + K+ + + + Y F+ G+ Sbjct 320 LAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT 365 >sp|Q4I7F9|PRP28_GIBZE Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=PRP28 PE=3 SV=1 Length=721 Score = 295 bits (755), Expect = 5e-88, Method: Composition-based stats. Identities = 95/423 (22%), Positives = 165/423 (39%), Gaps = 75/423 (18%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQ 301 + ++ G ++ L + P ALI+ P+REL +Q Sbjct 320 PIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEINKHDGPYALIMAPTRELVQQ 379 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL 361 ++F R + I+GG +Q L +G +IVV TPGRL D + L L Sbjct 380 IETEARKFA---GPLGFRVVSIVGGHQIEEQAYNLRDGAEIVVATPGRLLDCIERRLLVL 436 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG-------------------KRLQ 402 SQ ++++DEAD ++ G+ + +N++ + +P + Q Sbjct 437 SQCCYVIMDEADRMIDLGFEESVNKILDALPVTNEKPDTDEAENAQIMQRYLGGRDRYRQ 496 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ +AT+ V+++++K + P V + DTV V V+ + R Sbjct 497 TMMYTATMPPL-VERIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVSGEDRR-------- 547 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 K + I+F K +CD + Sbjct 548 ------------------------------KKRLQEILSSGNFGPPIIVFVNIKRNCDAV 577 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + Q G +S V LHG + +R+ L + G + L+ TD+A RGID+ Sbjct 578 ARDIKQMG---------WSAVTLHGSKTQEQREAALGSVRAGHTQVLVATDLAGRGIDVP 628 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V V+N + ++Y HRIGR GRA + G+AI+ + E + Y + K + Sbjct 629 DVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGPEDHETMYDLKQILSKSSISKV 688 Query 643 LKE 645 +E Sbjct 689 PEE 691 Score = 101 bits (252), Expect = 6e-21, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (44%), Gaps = 1/103 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E + + V+++ + P+ IQ +IP+ L D++ A TGSGKT AF +P+ Sbjct 287 MRSWQESNLPQRLLNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPL 346 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + + L E K + + FA Sbjct 347 LVYISD-LPPLDEINKHDGPYALIMAPTRELVQQIETEARKFA 388 >sp|A4RN46|PRP5_PYRO7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=PRP5 PE=3 SV=1 Length=1012 Score = 301 bits (770), Expect = 5e-88, Method: Composition-based stats. Identities = 105/464 (23%), Positives = 181/464 (39%), Gaps = 96/464 (21%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLN 304 V ++K G + + + + + P LI+ P+RELA Q Sbjct 410 PVIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFR 469 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV---STGKLNL 361 + K F K + LR + GG +DQ++ L+ G +IVV T GR+ DL+ ++L Sbjct 470 DCKPFLKTLG---LRAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSL 526 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 + ++VLDEAD + G+ + ++ + Q ++ SAT+ + L +K Sbjct 527 RRTTYIVLDEADRMFDMGFEPQVMKIFANV------RPDRQTVLFSATMPKI-MDALVKK 579 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVV--PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 ++ P +++ G+ V + +V K +RL E LG+ + DDV Sbjct 580 VLKNPVEIEVGGKSVVASEITQIVEIRDEKSKFNRLLELLGELYKDDDDV---------- 629 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 +++IF + D L + +++G Sbjct 630 ----------------------------RSLIFVERQEKADELLRELLRKG--------- 652 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 + C+ LHG + +R + FK G +I T VAARG+D+ + V+N P+ ++Y Sbjct 653 YGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDY 712 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 VHR GR GRA G A++ V E+E + + Sbjct 713 VHRAGRTGRAGNTGTAVTFVTEEQENCAIGIAKA-------------------------- 746 Query 660 SEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKG 703 L + V + F KV G+ + G KG Sbjct 747 ------LEQSGQPVPEKLIEMRKAFREKVKAGKAKDQSGFGGKG 784 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 4/96 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S G+ I + ++++ PT IQ +++P+I+ G DV+ A+TGSGKT AF +P+ Sbjct 377 VQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFLLPM 436 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + KDQ+ K + I + + + + Sbjct 437 FRHI----KDQEPVKDNEGPIGLILTPTRELAVQIF 468 >sp|Q3MSQ8|DDX4_PELLE Probable ATP-dependent RNA helicase DDX4 OS=Pelophylax lessonae OX=45623 GN=ddx4 PE=2 SV=1 Length=724 Score = 295 bits (754), Expect = 6e-88, Method: Composition-based stats. Identities = 96/417 (23%), Positives = 162/417 (39%), Gaps = 67/417 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQV------TQTKFLPNAPKALIVEPSRELAE 300 +A ++ G A + + P+A+IV P+REL Sbjct 318 PIIVAGRDLMACAQTGSGKTAAFLLPILAHLMVKGVESSAFQTLKEPEAIIVAPTRELIN 377 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q + ++F +R ++I GG L + G +I+ TPGRL D++ K+ Sbjct 378 QIYLDARKFS---YGTCVRPVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIG 434 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 L+++R+LVLDEAD +L G+ + I + + Q ++ SAT S ++ L+ Sbjct 435 LTKLRYLVLDEADRMLDMGFREDIENLLKS--SGMPSKEERQTLMFSATFPS-SIQSLAR 491 Query 421 KIMH-FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 +I+ +V + V +V+ V+ Sbjct 492 EILKPDYLFVVVGQVGGACSDVEQMVIEVDE----------------------------- 522 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 K + + ++E ++ ++F +TK D + + Q+ + Sbjct 523 -----------FGKKDKLMEILQEIGSERTMVFVKTKKKADFIATFLCQE---------K 562 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 +HGDR+ ER+ L F+ G ++ T VAARG+DI V YVIN +PD+ Y Sbjct 563 VPSTSIHGDREQKERETALRDFRTGQCPVIVATSVAARGLDIENVSYVINFDIPDDIDEY 622 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM 656 VHRIGR GR G AIS + + W E+ Sbjct 623 VHRIGRTGRCGNTGRAISFFDKRGDD-----EQRIARSLVKVLSDAHQEVPAWLEEV 674 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 0/106 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + +A+ V + ++ T IQ SIP+I+ G D++ A+TGSGKT AF +P+ Sbjct 285 ILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPI 344 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + + + K + + Y F+ G+ Sbjct 345 LAHLMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLDARKFSYGT 390 >sp|Q6CDV4|IF4A_YARLI ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=TIF1 PE=3 SV=1 Length=395 Score = 285 bits (728), Expect = 6e-88, Method: Composition-based stats. Identities = 112/449 (25%), Positives = 191/449 (43%), Gaps = 78/449 (17%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 + D+ F DLGL E+ + ++ + P G Sbjct 16 NYDEVVTSFD----DLGLKDELLRGIYGYGFENPSSIQQRAI----------LPVIKGND 61 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 L++A G K+ + + P+ALI+ P+RELA Q + F +Y+ Sbjct 62 VLAQAQSG-TGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYM--- 117 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 K+ IGG + + + V++ GV ++VGTPGR+ D++ L ++ +LDEAD +L Sbjct 118 KIECHACIGGTSVAEDIRVIQEGVHVIVGTPGRIHDMIERRILKTDLIKMFILDEADEML 177 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 S+ + D I + +P+ T Q ++ SAT+ +V ++ K M P + +K ++ Sbjct 178 SREFKDPIYDIFTTLPETT------QTVLLSATMP-AEVLDITGKFMRDPVRILVKKDEL 230 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 + + + V ++ K E Sbjct 231 TLEGIKQFYIDVEQES---------------------------------------YKFEV 251 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 + + QA+IFC T+ D L Q + F+ +HG+ + +R Sbjct 252 LCDLYETINVSQAVIFCNTRRKVDYLTQALTEA---------DFTVSSMHGETEQSQRDV 302 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 ++ F+ G R LI TD+ ARGID+ V VIN LP ++NY+HRIGR GR R G+AI Sbjct 303 IMKAFRTGSSRILITTDLLARGIDVQQVSLVINFDLPSNRENYIHRIGRGGRFGRKGVAI 362 Query 617 SLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 + V +E + + + Y+T + E Sbjct 363 NFVTSEDHGMLKEL-----ERFYSTEIVE 386 Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats. Identities = 33/133 (25%), Positives = 57/133 (43%), Gaps = 2/133 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F ++G+ E+ + + + P+ IQ +I ++ G DVL A++G+GKT FSI Sbjct 21 VTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISA 80 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREVKE- 118 +Q + E +K Q T Y + A IG + R ++E Sbjct 81 LQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIECHACIGGTSVAEDIRVIQEG 140 Query 119 WHGCRATKGLMKG 131 H T G + Sbjct 141 VHVIVGTPGRIHD 153 >sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=PRP5 PE=3 SV=1 Length=1064 Score = 302 bits (772), Expect = 6e-88, Method: Composition-based stats. Identities = 108/445 (24%), Positives = 184/445 (41%), Gaps = 75/445 (17%) Query 231 CVLKNAELKF--NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL----- 283 C L L G E+ + D V SG L Sbjct 434 CGLTRPILDVVEGLGYEKPTSIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIKD 493 Query 284 ------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + ALI+ P+REL Q +++ F K + KLR + GG A +DQ++ L+ Sbjct 494 QDPVTGDDGAIALIMTPTRELCTQIYSDLLPFAKAL---KLRAIAAYGGNAIKDQIAELK 550 Query 338 NGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 G +I+V TPGR+ DL++ NL + +LVLDEAD + G+ + ++ N + Sbjct 551 RGAEIIVATPGRMIDLLAANSGRVTNLKRATYLVLDEADRMFDMGFEPQVMKIFNNV--- 607 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP--KT 452 Q I+ SAT+ + L++K++ P + + G V + +V ++ K Sbjct 608 ---RPDRQTILFSATMPRI-IDALTKKVLREPVEIQVGGRSVVAPEITQIVEILDEGKKF 663 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 RL E LG+ + DDV +A+IF Sbjct 664 VRLLELLGELYADDDDV--------------------------------------RALIF 685 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 + D+L + +++G + C+ +HG + +R + FKKG +I T Sbjct 686 VERQEKADDLLREVLRRG---------YGCMSIHGGKDQEDRNSTISDFKKGVCPIMIAT 736 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 VAARG+D+ + V+N P+ ++YVHR GR GRA G A++ + E+E + Sbjct 737 SVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCAPGIAK 796 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQ 657 + + + + W +++ Sbjct 797 ALEQSGQPVPEQLNEMRKAWKEKVK 821 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 64/372 (17%), Positives = 129/372 (35%), Gaps = 51/372 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S+ G+ I VE + + PT IQ +++P+I+ G DV+ A+TGSGKT AF +P+ Sbjct 428 VQKWSQCGLTRPILDVVEGLGYEKPTSIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPM 487 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 ++ + KDQ I + + Y FA + R + + Sbjct 488 LRHI----KDQDPVTGDDGAIALIMTPTRELCTQIYSDLLPFAK-----ALKLRAIAAYG 538 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 G + + K E+ G + + + + + + F+ Sbjct 539 GNAIKDQIAELKRGAEIIVATPGRM-IDLLAANSGRVTNLKRATYLVLDEADRMFDMGFE 597 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF 240 + + + D+ + FS I + + L ++ Sbjct 598 PQVMKIFNN------VRPDRQTILFSA------TMPRIIDALTKKVLREPVEIQ------ 639 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 G P V + ++ + G + + +ALI +E A+ Sbjct 640 -VGGRSVVAPEITQIVEILDEGKKFVRLLELLG-----ELYADDDDVRALIFVERQEKAD 693 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ---LSVLENG-VDIVVGTPGRLDDLVST 356 L + + + I GG D+ +S + G I++ T V+ Sbjct 694 DLLREVLR-------RGYGCMSIHGGKDQEDRNSTISDFKKGVCPIMIAT------SVAA 740 Query 357 GKLNLSQVRFLV 368 L++ Q++ +V Sbjct 741 RGLDVKQLKLVV 752 >sp|Q5BCU6|PRP28_EMENI Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=prp28 PE=3 SV=2 Length=782 Score = 296 bits (758), Expect = 7e-88, Method: Composition-based stats. Identities = 97/383 (25%), Positives = 163/383 (43%), Gaps = 76/383 (20%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q K K+ + + I+GG + +Q L NG +I++ Sbjct 423 DGPYAIVLAPTRELAQQIEIEAK---KFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIII 479 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP------------ 392 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P Sbjct 480 ATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAE 539 Query 393 -------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + S + Q ++ +AT+ + V++++ K + P V + DTV V Sbjct 540 DSSAMSRHLGSKDRYRQTMMYTATMPTA-VERIARKYLRRPAIVTIGSAGEAVDTVEQRV 598 Query 446 VPV---NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + + + RL E L R Sbjct 599 EMIAGEDKRKKRLGEILSSGDFRPP----------------------------------- 623 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 I+F K +CD + + Q G FS V LHG + +R+ L + Sbjct 624 ------IIVFVNIKRNCDAIAREIKQWG---------FSSVTLHGSKTQEQREAALASVR 668 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G L+ TD+A RGID+ V VIN + ++Y HRIGR GRA + G+AI+ + E Sbjct 669 NGSTDVLVATDLAGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNE 728 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 V Y + K + +E Sbjct 729 DADVMYDLKQMLIKSPISRVPEE 751 Score = 110 bits (276), Expect = 8e-24, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V+ + + PT IQ +IP+ + D++ A TGSGKT AF +P+ Sbjct 345 MRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPL 404 Query 61 IQIVYETLK-DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + E + D+ E +K + + F Sbjct 405 LCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFT 448 >sp|A7EGG4|PRP28_SCLS1 Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=prp28 PE=3 SV=1 Length=816 Score = 297 bits (759), Expect = 8e-88, Method: Composition-based stats. Identities = 101/482 (21%), Positives = 181/482 (38%), Gaps = 92/482 (19%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 L + + ++ A + + ++ G Sbjct 385 KLPKRLLDVINQVGYDEPSAVQRAAIPIAL--------QARDLIGVAVTGSGKTAAFLLP 436 Query 273 GNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 +++ L + P A+I+ P+RELA+Q K+F + + I+GG Sbjct 437 LLVYISELPPLNEFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLG---FTCVSIVGGH 493 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 + +Q L NG +I++ TPGRL D + L L Q ++++DEAD ++ G+ + +N++ Sbjct 494 SLEEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKI 553 Query 388 HNQIP-------------------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 + +P + + Q ++ +AT+ V+K+++K + P Sbjct 554 LDALPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPA-VEKIAKKYLRRPAI 612 Query 429 VDLKGEDSVPDTVHHVVVPV---NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 V + +TV V V + + RL E L + Sbjct 613 VTIGNIGEAVETVEQRVEFVAGEDKRKKRLNEILASGEFQPP------------------ 654 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 I+F K +CD + + G F+ V L Sbjct 655 -----------------------IIVFVNIKRNCDAVARDIKHMG---------FTSVTL 682 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG + +R+ L + G L+ TD+A RGID+ V V+N + ++Y HRIGR Sbjct 683 HGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGR 742 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL---LSEI 662 GRA + G+AI+ + E Y + K + +E + Q L +I Sbjct 743 TGRAGKSGVAITFLGNEDADTMYDLKQMLMKSSISRVPEELRKHEAAQQKSQRGQGLKKI 802 Query 663 EE 664 EE Sbjct 803 EE 804 Score = 105 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 1/111 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++SE + + + ++ + P+ +Q +IP+ L D++ A TGSGKT AF +P+ Sbjct 378 MRSWSESKLPKRLLDVINQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPL 437 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + + E L E K + + FA C Sbjct 438 LVYISE-LPPLNEFTKNDGPYAIILAPTRELAQQIEVEAKKFATPLGFTCV 487 >sp|P0CQ80|DHH1_CRYNJ ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DHH1 PE=3 SV=1 Length=625 Score = 292 bits (747), Expect = 8e-88, Method: Composition-based stats. Identities = 109/427 (26%), Positives = 174/427 (41%), Gaps = 70/427 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D GL E+ + ++ + G L++A +G K Sbjct 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT----------GRDILARAKNG-TGK 86 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + + +ALI+ P+RELA QT K +I P L+ ++ GG Sbjct 87 TASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHI--PNLQVMITTGGTT 144 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L+ V I+VGTPGR+ DL S G +L++ V+DEAD LLS+ + I + Sbjct 145 LRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTL 204 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 PQ QV++ SAT + VK+ ++ M P ++L E ++ + Sbjct 205 ALCPQ------ERQVMLFSATFP-WTVKEFKDQHMVQPYEINLMDELTLKGVTQYYAYVE 257 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + +++Q Sbjct 258 ESQ-----------------------------------------KVHCLNTLFSKLQINQ 276 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 +IIFC + + L + + G +SC H + R + F+ G R Sbjct 277 SIIFCNSTNRVELLAKKVTELG---------YSCFYSHAKMQQAHRNRVFHDFRNGMTRN 327 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P ++Y+HRIGR GR +GLAISL+ E Y Sbjct 328 LVCSDLLTRGIDIQAVNVVINFDFPRTAESYLHRIGRSGRFGHLGLAISLLTLEDRHNLY 387 Query 629 HVCSSRG 635 + S G Sbjct 388 RIESELG 394 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 22/93 (24%), Positives = 41/93 (44%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + G+ E+ + + P+ IQ ++IP+ L G D+L A+ G+GKT +F IP + Sbjct 36 SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTL 95 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + +L Q + + Sbjct 96 NRINTSLSHIQ---------ALILVPTRELALQ 119 >sp|P0CQ81|DHH1_CRYNB ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DHH1 PE=3 SV=1 Length=625 Score = 292 bits (747), Expect = 8e-88, Method: Composition-based stats. Identities = 109/427 (26%), Positives = 174/427 (41%), Gaps = 70/427 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D GL E+ + ++ + G L++A +G K Sbjct 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT----------GRDILARAKNG-TGK 86 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + + +ALI+ P+RELA QT K +I P L+ ++ GG Sbjct 87 TASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHI--PNLQVMITTGGTT 144 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L+ V I+VGTPGR+ DL S G +L++ V+DEAD LLS+ + I + Sbjct 145 LRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIEQTL 204 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 PQ QV++ SAT + VK+ ++ M P ++L E ++ + Sbjct 205 ALCPQ------ERQVMLFSATFP-WTVKEFKDQHMVQPYEINLMDELTLKGVTQYYAYVE 257 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + +++Q Sbjct 258 ESQ-----------------------------------------KVHCLNTLFSKLQINQ 276 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 +IIFC + + L + + G +SC H + R + F+ G R Sbjct 277 SIIFCNSTNRVELLAKKVTELG---------YSCFYSHAKMQQAHRNRVFHDFRNGMTRN 327 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P ++Y+HRIGR GR +GLAISL+ E Y Sbjct 328 LVCSDLLTRGIDIQAVNVVINFDFPRTAESYLHRIGRSGRFGHLGLAISLLTLEDRHNLY 387 Query 629 HVCSSRG 635 + S G Sbjct 388 RIESELG 394 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 22/93 (24%), Positives = 41/93 (44%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + G+ E+ + + P+ IQ ++IP+ L G D+L A+ G+GKT +F IP + Sbjct 36 SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTL 95 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + +L Q + + Sbjct 96 NRINTSLSHIQ---------ALILVPTRELALQ 119 >sp|Q4R5S7|DDX4_MACFA Probable ATP-dependent RNA helicase DDX4 OS=Macaca fascicularis OX=9541 GN=DDX4 PE=2 SV=1 Length=725 Score = 294 bits (753), Expect = 8e-88, Method: Composition-based stats. Identities = 97/412 (24%), Positives = 162/412 (39%), Gaps = 69/412 (17%) Query 252 KDGFVALSKAPDGYIVKSQHSGNA-----QVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 +A ++ G A +T + F P+ +IV P+REL Q Sbjct 326 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLE 385 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++F +R ++I GG + + G +I+ TPGRL D++ K+ L Q++ Sbjct 386 ARKFS---FGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIK 442 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH- 424 +LVLDEAD +L G+ + ++ + ++ Q ++ SAT ++++L+ + + Sbjct 443 YLVLDEADRMLDMGFGPEMKKLISC--PGMPSKEQRQTLMFSATFP-EEIQRLAAEFLKS 499 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 +V + V V+ V Sbjct 500 NYLFVAVGQVGGACRDVQQTVLQVG----------------------------------- 524 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 + K E V ++ ++ ++F TK D + + Q+ + S Sbjct 525 -----QFSKREKLVEILRNIGDERTMVFVETKKKADFIATFLCQE---------KISTTS 570 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +HGDR+ ER+Q L F+ G L+ T VAARG+DI V +VIN LP YVHRIG Sbjct 571 IHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIG 630 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM 656 R GR G AIS E + + + W E+ Sbjct 631 RTGRCGNTGRAISFFDLESD-------NHLAQPLVKVLTDAQQDVPAWLEEI 675 Score = 104 bits (260), Expect = 7e-22, Method: Composition-based stats. Identities = 25/106 (24%), Positives = 46/106 (43%), Gaps = 0/106 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + + + T +Q SIP+IL G D++ A+TGSGKT AF +P+ Sbjct 288 ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPI 347 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + K+ + + + Y F+ G+ Sbjct 348 LAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLEARKFSFGT 393 >sp|Q7ZY47|DDX42_XENLA ATP-dependent RNA helicase DDX42 OS=Xenopus laevis OX=8355 GN=ddx42 PE=2 SV=1 Length=947 Score = 299 bits (766), Expect = 9e-88, Method: Composition-based stats. Identities = 96/431 (22%), Positives = 163/431 (38%), Gaps = 67/431 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 + G ++ ++ ++ + + ++K G Sbjct 249 CSSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVALS--------GRDMIGIAKTGSGK 300 Query 266 IVKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 + K L + P A+IV P+REL +Q + K+F K + LR + + Sbjct 301 TAAFIWPILVHIMDQKELQPADGPIAVIVCPTRELCQQIHSECKRFGKAYN---LRSVAV 357 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + +Q L+ G +IVV TPGRL D V NL +V +LV DEAD + G+ Sbjct 358 YGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQ 417 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 + + N + Q ++ SAT ++KL+ I+ P V + + Sbjct 418 VRSIANHV------RPDRQTLLFSATF-RKKIEKLARDILVDPIRVVQGDIGEANEDITQ 470 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 VV + PE W+ + R ++ Sbjct 471 VVEILPS------------------------------GPEKWTWLTR--------RLVEF 492 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 ++F K + + L Q LHGD ER + + FKK Sbjct 493 TSTGSVLVFVTKKANAEELAANLRQD---------DHPLGLLHGDMDQSERNKVISDFKK 543 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 + L+ TDVAARG+DI + V+N + + + HRIGR GRA G+A +L+ +++ Sbjct 544 KSIPVLVATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTSKE 603 Query 624 EKVWYHVCSSR 634 + + Sbjct 604 SNFAGDLVRNL 614 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + IP+ L G D++ A+TGSGKT AF P++ Sbjct 250 SSFAHFGFDEQLLHQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPIL 309 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + DQ+E + I + + F Sbjct 310 VHIM----DQKELQPADGPIAVIVCPTRELCQQIHSECKRFGKA 349 >sp|Q6CH90|SUB2_YARLI ATP-dependent RNA helicase SUB2 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SUB2 PE=3 SV=2 Length=441 Score = 286 bits (731), Expect = 9e-88, Method: Composition-based stats. Identities = 101/406 (25%), Positives = 163/406 (40%), Gaps = 62/406 (15%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L +A G + K+ + + Q + +P +++ +RELA Q +N +F KY+ Sbjct 94 GTDVLCQAKAG-VGKTAVFVLSTLQQLEPVPGECSVVVLCHTRELAYQIMNEYARFSKYL 152 Query 314 DNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 P ++ + GG + + +++N ++V TPGRL LV L L V+ V+D Sbjct 153 --PDVKTAVFYGGSPIQKDIELIQNKETSPHVIVATPGRLHALVRDKHLRLGNVKTFVID 210 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 E D +L + R +I +VT ++ QV++ SATL S +++ + +K M P + Sbjct 211 ECDKVLD---QIDMRRDVQEIFRVTP--RQKQVMMFSATL-SQEIRPICKKFMSSPLEIL 264 Query 431 LKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + E + V V K+ Sbjct 265 VDDEGKLTLHGLQQYYVDVEEKS------------------------------------- 287 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K + + +Q IIF ++ + L Q G F C +H Sbjct 288 ---KNRKLGDLLDNLEFNQVIIFVKSTSRANGLSQVLNANG---------FPCTAVHSGI 335 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 ER + FK+ R + TDV RGIDI + IN LP E Y+HR+GR GR Sbjct 336 PQEERIARYKEFKEFKKRICVSTDVFGRGIDIERINLAINYDLPAEADQYLHRVGRAGRF 395 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE 655 GLAIS V+T ++K R + E + + N Sbjct 396 GTKGLAISFVSTPEDKEVLAKIQERFEVNIAPYPAEGVDPSTYMNS 441 Score = 75.9 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 43/103 (42%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ + + P+++Q IP + G DVL A+ G GKT F + + Sbjct 57 TGFRDFLLKPELLRAIVDCGFEHPSEVQQVCIPQSILGTDVLCQAKAGVGKTAVFVLSTL 116 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + + G+ + + + + F+ Sbjct 117 QQL-----EPVPGECSVVVLCH----TRELAYQIMNEYARFSK 150 >sp|A1CHL3|PRP28_ASPCL Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=prp28 PE=3 SV=1 Length=798 Score = 296 bits (757), Expect = 1e-87, Method: Composition-based stats. Identities = 100/457 (22%), Positives = 178/457 (39%), Gaps = 80/457 (18%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 ++ GL + + ++ A + + ++ G Sbjct 369 EESGLPKRLLELVDRVGYKEPTPIQRAAIPIAL--------QSRDLIGVAVTGSGKTASF 420 Query 270 QHSGNAQVTQTKFLP-------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 + + + + P A+++ P+RELA+Q K+F + + + Sbjct 421 LLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTQPLG---FNVVS 477 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 I+GG + +Q L NG +I++ TPGRL D + L LSQ ++++DEAD ++ G+ + Sbjct 478 IVGGHSLEEQAYSLRNGAEIIIATPGRLVDCIERRILVLSQCCYIIMDEADRMIDLGFEE 537 Query 383 FINRMHNQIP--------------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 +N++ + +P + Q ++ +AT+ S V++++ K + P Sbjct 538 PVNKILDALPVTNEKPDSDEAENSAAMRSHRYRQTMMYTATMPSA-VERIARKYLRRPAI 596 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 V + DTV V L K R D+ + RP Sbjct 597 VTIGSAGEAVDTVEQRV--------ELIAGEDKRKKRLADILSSGEFRPP---------- 638 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 I+F K +CD + + G FS V LHG Sbjct 639 --------------------IIVFVNIKRNCDAIAREIKHMG---------FSSVTLHGS 669 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + +R+ L + G L+ TD+A RGID+ V V+N + ++Y HRIGR GR Sbjct 670 KTQDQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGR 729 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 A + G+AI+ + E V Y + K + +E Sbjct 730 AGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEE 766 Score = 109 bits (272), Expect = 3e-23, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E G+ + + V+ + + PT IQ +IP+ L D++ A TGSGKT +F +P+ Sbjct 365 MRSWEESGLPKRLLELVDRVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPL 424 Query 61 IQIVYETLK-DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + E + D+ E +K + + F Sbjct 425 LVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFT 468 >sp|Q5W5U4|DDX4_BOVIN Probable ATP-dependent RNA helicase DDX4 OS=Bos taurus OX=9913 GN=DDX4 PE=2 SV=1 Length=729 Score = 294 bits (753), Expect = 1e-87, Method: Composition-based stats. Identities = 95/385 (25%), Positives = 158/385 (41%), Gaps = 62/385 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNA-----QVTQTKFLP-NAPKALIVEPSRELAE 300 +A ++ G A +T ++F P+ +IV P+REL Sbjct 322 PIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELIN 381 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q ++F +R ++I GG + + G +I+ TPGRL D++ K+ Sbjct 382 QIYLEARKFS---FGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIG 438 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 L QV++LVLDEAD +L G+ + ++ + ++ Q ++ SAT ++++L+ Sbjct 439 LRQVKYLVLDEADRMLDMGFGPEMKKLISC--PGMPSKEQRQTLMFSATFP-EEIQRLAG 495 Query 421 KIMH-FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 + + +V + V ++ V + R Sbjct 496 EFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKR------------------------- 530 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 E V ++ ++ ++F TK D + + Q+ + Sbjct 531 ---------------EKLVEILRNIGDERTMVFVETKKKADFIATFLCQE---------K 566 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 S +HGDR+ ER+Q L F+ G L+ T VAARG+DI V +VIN LP Y Sbjct 567 ISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEY 626 Query 600 VHRIGRVGRAERMGLAISLVATEKE 624 VHRIGR GR G AIS E + Sbjct 627 VHRIGRTGRCGNTGRAISFFDLESD 651 Score = 101 bits (252), Expect = 6e-21, Method: Composition-based stats. Identities = 25/106 (24%), Positives = 46/106 (43%), Gaps = 0/106 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + + + T +Q SIP+I GG D++ A+TGSGKT AF +P+ Sbjct 289 ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPI 348 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + K+ + + + Y F+ G+ Sbjct 349 LAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGT 394 >sp|Q5WR10|DX39B_CANLF Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3 SV=1 Length=428 Score = 285 bits (730), Expect = 1e-87, Method: Composition-based stats. Identities = 109/509 (21%), Positives = 194/509 (38%), Gaps = 106/509 (21%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV-----LKNAELKFN 241 +D LD ++ V+ + G D G +K + L EL Sbjct 2 AENDVDNELLDYEEDEVE-TAAGGD-GSEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRA 59 Query 242 FGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 + F+ P + G L +A G K+ A + Q + + L+ Sbjct 60 IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLV 118 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRL 350 + +RELA Q ++F KY+ P ++ + GG++ + VL+ IVVGTPGR+ Sbjct 119 MCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L LNL ++ +LDE D +L + R +I ++T K QV++ SATL Sbjct 177 LALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL 231 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 S +++ + K M P + + E + L + +++ D Sbjct 232 -SKEIRPVCRKFMQDPMEIFVDDETKL-----------------TLHGLQQYYVKLKDNE 273 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + + +Q +IF ++ C L Q ++Q Sbjct 274 ----------------------KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ- 310 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F + +H ER ++FK R L+ T++ RG+DI V N Sbjct 311 --------NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +P++ Y+HR+ R GR GLAI+ V+ E Sbjct 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDE---------------------------- 394 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 N+ ++L+++++ IS++ +I + Sbjct 395 ---NDAKILNDVQDRFEVNISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus OX=10116 GN=Ddx46 PE=1 SV=1 Length=1032 Score = 300 bits (769), Expect = 1e-87, Method: Composition-based stats. Identities = 92/455 (20%), Positives = 178/455 (39%), Gaps = 71/455 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 G++ +I +K ++ + + ++K G + Sbjct 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMS--------GRDLIGIAKTGSGKTIAFLLP 429 Query 273 G--NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + ++ P A+I+ P+RELA Q K+F K + LR + + GG Sbjct 430 MFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLG---LRVVCVYGGTGIS 486 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 +Q++ L+ G +I+V TPGR+ D+++ NL +V ++VLDEAD + G+ + R+ Sbjct 487 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + Q ++ SAT ++ L+ +I+ P V + G V V V+ Sbjct 547 VDNV------RPDRQTVMFSATFPRA-MEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + + L H + + Sbjct 600 IEEEKKFLKLLELLGHYQ---------------------------------------ESG 620 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 IIF + D L + ++ + C+ LHG ++R + FK G + Sbjct 621 SVIIFVDKQEHADGLLKDLMRA---------SYPCMSLHGGIDQYDRDSIINDFKNGTCK 671 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+D+ + V+N + P+ ++YVHR GR GRA G A + + ++ + Sbjct 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 + + + + + ++ + +I Sbjct 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKI 766 Score = 114 bits (285), Expect = 9e-25, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 15/140 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + G+ +I ++++ + PT IQ ++IP I+ G D++ A+TGSGKT AF +P+ Sbjct 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLC 110 + + DQ+ ++G+ I + + + F+ G G+ Sbjct 431 FRHIM----DQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGIS 486 Query 111 CQSREVKE-WHGCRATKGLM 129 Q E+K T G M Sbjct 487 EQIAELKRGAEIIVCTPGRM 506 >sp|Q5RE47|DX39B_PONAB Spliceosome RNA helicase DDX39B OS=Pongo abelii OX=9601 GN=DDX39B PE=2 SV=1 Length=428 Score = 285 bits (730), Expect = 1e-87, Method: Composition-based stats. Identities = 109/509 (21%), Positives = 193/509 (38%), Gaps = 106/509 (21%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV-----LKNAELKFN 241 +D LD + V+ + G D G +K + L EL Sbjct 2 AENDVDNELLDYEDDEVE-TAAGGD-GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRA 59 Query 242 FGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 + F+ P + G L +A G K+ A + Q + + L+ Sbjct 60 IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLV 118 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRL 350 + +RELA Q ++F KY+ P ++ + GG++ + VL+ IVVGTPGR+ Sbjct 119 MCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L LNL ++ +LDE D +L + R +I ++T K QV++ SATL Sbjct 177 LALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL 231 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 S +++ + K M P + + E + L + +++ D Sbjct 232 -SKEIRPVCRKFMQDPMEIFVDDETKL-----------------TLHGLQQYYVKLKDNE 273 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + + +Q +IF ++ C L Q ++Q Sbjct 274 ----------------------KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ- 310 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F + +H ER ++FK R L+ T++ RG+DI V N Sbjct 311 --------NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +P++ Y+HR+ R GR GLAI+ V+ E Sbjct 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDE---------------------------- 394 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 N+ ++L+++++ IS++ +I + Sbjct 395 ---NDAKILNDVQDRFEVNISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|Q29024|DX39B_PIG Spliceosome RNA helicase DDX39B OS=Sus scrofa OX=9823 GN=DDX39B PE=3 SV=2 Length=428 Score = 285 bits (730), Expect = 1e-87, Method: Composition-based stats. Identities = 109/509 (21%), Positives = 193/509 (38%), Gaps = 106/509 (21%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV-----LKNAELKFN 241 +D LD + V+ + G D G +K + L EL Sbjct 2 AENDVDNELLDYEDDEVE-TAAGGD-GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRA 59 Query 242 FGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 + F+ P + G L +A G K+ A + Q + + L+ Sbjct 60 IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLV 118 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRL 350 + +RELA Q ++F KY+ P ++ + GG++ + VL+ IVVGTPGR+ Sbjct 119 MCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L LNL ++ +LDE D +L + R +I ++T K QV++ SATL Sbjct 177 LALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL 231 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 S +++ + K M P + + E + L + +++ D Sbjct 232 -SKEIRPVCRKFMQDPMEIFVDDETKL-----------------TLHGLQQYYVKLKDNE 273 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + + +Q +IF ++ C L Q ++Q Sbjct 274 ----------------------KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ- 310 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F + +H ER ++FK R L+ T++ RG+DI V N Sbjct 311 --------NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +P++ Y+HR+ R GR GLAI+ V+ E Sbjct 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDE---------------------------- 394 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 N+ ++L+++++ IS++ +I + Sbjct 395 ---NDAKILNDVQDRFEVNISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|P60024|DX39B_PANTR Spliceosome RNA helicase DDX39B OS=Pan troglodytes OX=9598 GN=DDX39B PE=3 SV=1 Length=428 Score = 285 bits (730), Expect = 1e-87, Method: Composition-based stats. Identities = 109/509 (21%), Positives = 193/509 (38%), Gaps = 106/509 (21%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV-----LKNAELKFN 241 +D LD + V+ + G D G +K + L EL Sbjct 2 AENDVDNELLDYEDDEVE-TAAGGD-GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRA 59 Query 242 FGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 + F+ P + G L +A G K+ A + Q + + L+ Sbjct 60 IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLV 118 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRL 350 + +RELA Q ++F KY+ P ++ + GG++ + VL+ IVVGTPGR+ Sbjct 119 MCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L LNL ++ +LDE D +L + R +I ++T K QV++ SATL Sbjct 177 LALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL 231 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 S +++ + K M P + + E + L + +++ D Sbjct 232 -SKEIRPVCRKFMQDPMEIFVDDETKL-----------------TLHGLQQYYVKLKDNE 273 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + + +Q +IF ++ C L Q ++Q Sbjct 274 ----------------------KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ- 310 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F + +H ER ++FK R L+ T++ RG+DI V N Sbjct 311 --------NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +P++ Y+HR+ R GR GLAI+ V+ E Sbjct 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDE---------------------------- 394 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 N+ ++L+++++ IS++ +I + Sbjct 395 ---NDAKILNDVQDRFEVNISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|Q5TM17|DX39B_MACMU Spliceosome RNA helicase DDX39B OS=Macaca mulatta OX=9544 GN=DDX39B PE=3 SV=1 Length=428 Score = 285 bits (730), Expect = 1e-87, Method: Composition-based stats. Identities = 109/509 (21%), Positives = 193/509 (38%), Gaps = 106/509 (21%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV-----LKNAELKFN 241 +D LD + V+ + G D G +K + L EL Sbjct 2 AENDVDNELLDYEDDEVE-TAAGGD-GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRA 59 Query 242 FGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 + F+ P + G L +A G K+ A + Q + + L+ Sbjct 60 IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLV 118 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRL 350 + +RELA Q ++F KY+ P ++ + GG++ + VL+ IVVGTPGR+ Sbjct 119 MCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L LNL ++ +LDE D +L + R +I ++T K QV++ SATL Sbjct 177 LALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL 231 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 S +++ + K M P + + E + L + +++ D Sbjct 232 -SKEIRPVCRKFMQDPMEIFVDDETKL-----------------TLHGLQQYYVKLKDNE 273 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + + +Q +IF ++ C L Q ++Q Sbjct 274 ----------------------KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ- 310 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F + +H ER ++FK R L+ T++ RG+DI V N Sbjct 311 --------NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +P++ Y+HR+ R GR GLAI+ V+ E Sbjct 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDE---------------------------- 394 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 N+ ++L+++++ IS++ +I + Sbjct 395 ---NDAKILNDVQDRFEVNISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|Q13838|DX39B_HUMAN Spliceosome RNA helicase DDX39B OS=Homo sapiens OX=9606 GN=DDX39B PE=1 SV=1 Length=428 Score = 285 bits (730), Expect = 1e-87, Method: Composition-based stats. Identities = 109/509 (21%), Positives = 193/509 (38%), Gaps = 106/509 (21%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV-----LKNAELKFN 241 +D LD + V+ + G D G +K + L EL Sbjct 2 AENDVDNELLDYEDDEVE-TAAGGD-GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRA 59 Query 242 FGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 + F+ P + G L +A G K+ A + Q + + L+ Sbjct 60 IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLV 118 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRL 350 + +RELA Q ++F KY+ P ++ + GG++ + VL+ IVVGTPGR+ Sbjct 119 MCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L LNL ++ +LDE D +L + R +I ++T K QV++ SATL Sbjct 177 LALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL 231 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 S +++ + K M P + + E + L + +++ D Sbjct 232 -SKEIRPVCRKFMQDPMEIFVDDETKL-----------------TLHGLQQYYVKLKDNE 273 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + + +Q +IF ++ C L Q ++Q Sbjct 274 ----------------------KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ- 310 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F + +H ER ++FK R L+ T++ RG+DI V N Sbjct 311 --------NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +P++ Y+HR+ R GR GLAI+ V+ E Sbjct 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDE---------------------------- 394 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 N+ ++L+++++ IS++ +I + Sbjct 395 ---NDAKILNDVQDRFEVNISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|Q58Z64|DHH1_CRYNH ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) OX=235443 GN=VAD1 PE=1 SV=1 Length=616 Score = 291 bits (745), Expect = 1e-87, Method: Composition-based stats. Identities = 109/427 (26%), Positives = 173/427 (41%), Gaps = 70/427 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D GL E+ + ++ + G L++A +G K Sbjct 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALT----------GRDILARAKNG-TGK 86 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + + +ALI+ P+RELA QT K +I P L+ ++ GG Sbjct 87 TASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHI--PNLQVMITTGGTT 144 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + L+ V I+VGTPGR+ DL S G L++ V+DEAD LLS+ + I + Sbjct 145 LRDDILRLQQPVHILVGTPGRILDLGSKGIAGLNKCGIFVMDEADKLLSEDFMPVIEQTL 204 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 PQ QV++ SAT + VK+ ++ M P ++L E ++ + Sbjct 205 ALCPQ------ERQVMLFSATFP-WTVKEFKDQHMVQPYEINLMDELTLKGVTQYYAYVE 257 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + +++Q Sbjct 258 ESQ-----------------------------------------KVHCLNTLFSKLQINQ 276 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 +IIFC + + L + + G +SC H + R + F+ G R Sbjct 277 SIIFCNSTNRVELLAKKVTELG---------YSCFYSHAKMQQAHRNRVFHDFRNGMTRN 327 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P ++Y+HRIGR GR +GLAISL+ E Y Sbjct 328 LVCSDLLTRGIDIQAVNVVINFDFPRTAESYLHRIGRSGRFGHLGLAISLLTLEDRHNLY 387 Query 629 HVCSSRG 635 + S G Sbjct 388 RIESELG 394 Score = 100 bits (250), Expect = 8e-21, Method: Composition-based stats. Identities = 22/93 (24%), Positives = 41/93 (44%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + G+ E+ + + P+ IQ ++IP+ L G D+L A+ G+GKT +F IP + Sbjct 36 SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTL 95 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + +L Q + + Sbjct 96 NRINTSLSHIQ---------ALILVPTRELALQ 119 >sp|Q6C024|PRP28_YARLI Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=PRP28 PE=3 SV=1 Length=575 Score = 290 bits (742), Expect = 1e-87, Method: Composition-based stats. Identities = 90/439 (21%), Positives = 174/439 (40%), Gaps = 78/439 (18%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + + ++ A + G + +++ G + + Sbjct 174 VRDTISRMGYKEPTPIQRAAIPIALG--------IRDVIGVAETGSGKTASFLIPLISYI 225 Query 278 TQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + L N P LI+ P+RELA Q + K+ + + ++GG +A++Q Sbjct 226 CELPKLDERSKVNGPYGLILAPTRELAMQIKDEAV---KFCAPLGFKVVSVVGGYSAQEQ 282 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 ++ G +++V TPGRL D++ L L+Q ++V+DEAD ++ G+ + + ++ +P Sbjct 283 ALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLASLP 342 Query 393 QVT--------------SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 S + Q ++ +AT+ ++KL++K + P V + Sbjct 343 SSNAKPDSDEAENLAAVSTRRYRQTMMYTATMPVA-IEKLAKKYLRRPGIVTIGSAGQAG 401 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 TV +V +N R K Sbjct 402 STVTQLVEFLNTDEKR--------------------------------------KRRLLD 423 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 K ++F K DC+ + + G + +HG ++ +R+Q + Sbjct 424 IISKRQYRPPIVVFLNYKRDCEAVSDALVAAG---------WRTAIIHGGKQQEQREQAV 474 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + K+G V L+ TDVA RG+DI V V+N + + ++Y HRIGR GRA + G A++ Sbjct 475 QHLKRGAVDVLVATDVAGRGLDIPNVSLVVNFQMANNIESYTHRIGRTGRAGKRGTAVTF 534 Query 619 VATEKEKVWYHVCSSRGKG 637 + E + V + + + Sbjct 535 LGQEDDDVLFELKQMISRS 553 Score = 102 bits (255), Expect = 2e-21, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 49/103 (48%), Gaps = 2/103 (2%) Query 1 MAAFSEMGVMPEIAQ-AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +++E +P I + + M + PT IQ +IP+ LG DV+ AETGSGKT +F IP Sbjct 161 LRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIP 220 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +I + E K E K + + M D F Sbjct 221 LISYICELPK-LDERSKVNGPYGLILAPTRELAMQIKDEAVKF 262 >sp|Q810A7|DDX42_MOUSE ATP-dependent RNA helicase DDX42 OS=Mus musculus OX=10090 GN=Ddx42 PE=1 SV=3 Length=929 Score = 298 bits (764), Expect = 1e-87, Method: Composition-based stats. Identities = 96/390 (25%), Positives = 156/390 (40%), Gaps = 59/390 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKS-QHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLN 304 + ++K G + Q + P + P A+IV P+REL +Q Sbjct 285 PVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHA 344 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 K+F K + LR + + GG + +Q L+ G +IVV TPGRL D V NL +V Sbjct 345 ECKRFGKAYN---LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRV 401 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 +LV DEAD + G+ + + + + Q ++ SAT ++KL+ I+ Sbjct 402 SYLVFDEADRMFDMGFEYQVRSIASHV------RPDRQTLLFSATF-RKKIEKLARDILI 454 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 P V + V +V ++ + W L + Sbjct 455 DPIRVVQGDIGEANEDVTQIVEILHSGPSK-WNWLTR----------------------- 490 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 R ++ ++F K + + L Q+G + Sbjct 491 --------------RLVEFTSSGSVLLFVTKKANAEELASNLKQEG---------HNLGL 527 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHGD ER + + FKK D+ L+ TDVAARG+DI + VIN + + + HRIG Sbjct 528 LHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIG 587 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSR 634 R GRA G+A +L+ + + + Sbjct 588 RTGRAGEKGVAYTLLTPKDSNFAGDLVRNL 617 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + +P+ L G D++ A+TGSGKT AF P++ Sbjct 253 SSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPML 312 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + DQ+E + G I + + F Sbjct 313 IHIM----DQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKA 352 >sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens OX=9606 GN=DDX46 PE=1 SV=2 Length=1031 Score = 300 bits (768), Expect = 1e-87, Method: Composition-based stats. Identities = 92/455 (20%), Positives = 178/455 (39%), Gaps = 71/455 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 G++ +I +K ++ + + ++K G + Sbjct 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMS--------GRDLIGIAKTGSGKTIAFLLP 429 Query 273 G--NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + ++ P A+I+ P+RELA Q K+F K + LR + + GG Sbjct 430 MFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLG---LRVVCVYGGTGIS 486 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 +Q++ L+ G +I+V TPGR+ D+++ NL +V ++VLDEAD + G+ + R+ Sbjct 487 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + Q ++ SAT ++ L+ +I+ P V + G V V V+ Sbjct 547 VDNV------RPDRQTVMFSATFPRA-MEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + + L H + + Sbjct 600 IEEEKKFLKLLELLGHYQ---------------------------------------ESG 620 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 IIF + D L + ++ + C+ LHG ++R + FK G + Sbjct 621 SVIIFVDKQEHADGLLKDLMRA---------SYPCMSLHGGIDQYDRDSIINDFKNGTCK 671 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+D+ + V+N + P+ ++YVHR GR GRA G A + + ++ + Sbjct 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 + + + + + ++ + +I Sbjct 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKI 766 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 15/140 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + G+ +I ++++ + PT IQ ++IP I+ G D++ A+TGSGKT AF +P+ Sbjct 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLC 110 + + DQ+ ++G+ I + + + F+ G G+ Sbjct 431 FRHIM----DQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGIS 486 Query 111 CQSREVKE-WHGCRATKGLM 129 Q E+K T G M Sbjct 487 EQIAELKRGAEIIVCTPGRM 506 >sp|O00148|DX39A_HUMAN ATP-dependent RNA helicase DDX39A OS=Homo sapiens OX=9606 GN=DDX39A PE=1 SV=2 Length=427 Score = 285 bits (729), Expect = 1e-87, Method: Composition-based stats. Identities = 95/382 (25%), Positives = 157/382 (41%), Gaps = 58/382 (15%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L +A G K+ A + Q + + L++ +RELA Q ++F KY+ Sbjct 81 GMDVLCQAKSGM-GKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYM 139 Query 314 DNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P ++ + GG++ + VL+ +VVGTPGR+ LV +L V+ VLDE Sbjct 140 --PSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDEC 197 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L + R +I ++T K Q ++ SATL S D++ + K M P V + Sbjct 198 DKMLE---QLDMRRDVQEIFRLTPHEK--QCMMFSATL-SKDIRPVCRKFMQDPMEVFVD 251 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 E + L + +++ D Sbjct 252 DETKL-----------------TLHGLQQYYVKLKDSE---------------------- 272 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + + +Q IIF ++ C L Q ++Q F + +H Sbjct 273 KNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQ---------NFPAIAIHRGMAQE 323 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER ++FK R L+ T++ RG+DI V V N +P++ Y+HR+ R GR Sbjct 324 ERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTK 383 Query 613 GLAISLVATEKEKVWYHVCSSR 634 GLAI+ V+ E + + R Sbjct 384 GLAITFVSDENDAKILNDVQDR 405 Score = 78.2 bits (191), Expect = 6e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 44 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 103 Query 62 QIV 64 Q + Sbjct 104 QQI 106 >sp|Q0UWC8|PRP28_PHANO Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=PRP28 PE=3 SV=1 Length=746 Score = 294 bits (753), Expect = 1e-87, Method: Composition-based stats. Identities = 98/459 (21%), Positives = 182/459 (40%), Gaps = 79/459 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 +N ++ GL ++ +++ ++ A + + ++ G Sbjct 327 RNWQESGLPDKVLRLVEHVGYAEPSAVQRAAIPIAL--------QCRDLIGVAVTGSGKT 378 Query 267 VKSQHSGNAQVTQTKFL-----PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 ++Q L + P A+++ P+RELA+Q ++F + Sbjct 379 ASFVLPLLVYISQLPPLGPSNRADGPYAIVLAPTRELAQQIEVETRKFAAPLG---FNTA 435 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 +I+GG + +Q + +G +IV+ TPGRL D + L LSQ ++++DEAD ++ G+ Sbjct 436 VIVGGHSIEEQAFQMRDGAEIVIATPGRLVDCIERRMLVLSQCTYVIMDEADRMIDMGFE 495 Query 382 DFINRMHNQIP--------------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 + +N++ + +P G Q ++ +AT+ + V++++ K + P Sbjct 496 EPVNKILDALPVTNEKPDSDAAEDPNAMKRGMYRQTMMYTATMPTA-VERIARKYLRRPA 554 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 V + +TV V + + R Sbjct 555 IVTIGNVGEAVETVEQRVEHIQGEEKR--------------------------------- 581 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 K I+F K +CD + + G FS V LHG Sbjct 582 -----KKRLQEILNSGEFTPPIIVFVNIKRNCDAIARDIKNMG---------FSSVTLHG 627 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 + +R+ L + ++ V L+ TD+A RGIDI V V+N + ++Y HRIGR G Sbjct 628 SKTQEQREAALAQLREHRVDVLVATDLAGRGIDITDVSLVVNFNMATSIESYTHRIGRTG 687 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 RA + G+AI+ E V Y + K +++ ED Sbjct 688 RAGKSGVAITFWGNEDADVLYDLKQMLTKSQI-SKVPED 725 Score = 93.7 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M + E G+ ++ + VE + + P+ +Q +IP+ L D++ A TGSGKT +F +P+ Sbjct 326 MRNWQESGLPDKVLRLVEHVGYAEPSAVQRAAIPIALQCRDLIGVAVTGSGKTASFVLPL 385 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + + L + + + FA Sbjct 386 LVYISQ-LPPLGPSNRADGPYAIVLAPTRELAQQIEVETRKFAA 428 >sp|Q63413|DX39B_RAT Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3 Length=428 Score = 285 bits (729), Expect = 1e-87, Method: Composition-based stats. Identities = 109/509 (21%), Positives = 193/509 (38%), Gaps = 106/509 (21%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV-----LKNAELKFN 241 +D LD + V+ + G D G +K + L EL Sbjct 2 AENDVDNELLDYEDDEVE-TAAGAD-GTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRA 59 Query 242 FGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 + F+ P + G L +A G K+ A + Q + + L+ Sbjct 60 IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLV 118 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRL 350 + +RELA Q ++F KY+ P ++ + GG++ + VL+ IVVGTPGR+ Sbjct 119 MCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L LNL ++ +LDE D +L + R +I ++T K QV++ SATL Sbjct 177 LALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL 231 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 S +++ + K M P + + E + L + +++ D Sbjct 232 -SKEIRPVCRKFMQDPMEIFVDDETKL-----------------TLHGLQQYYVKLKDNE 273 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + + +Q +IF ++ C L Q ++Q Sbjct 274 ----------------------KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ- 310 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F + +H ER ++FK R L+ T++ RG+DI V N Sbjct 311 --------NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +P++ Y+HR+ R GR GLAI+ V+ E Sbjct 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDE---------------------------- 394 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 N+ ++L+++++ IS++ +I + Sbjct 395 ---NDAKILNDVQDRFEVNISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|Q9Z1N5|DX39B_MOUSE Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1 Length=428 Score = 285 bits (729), Expect = 1e-87, Method: Composition-based stats. Identities = 109/509 (21%), Positives = 193/509 (38%), Gaps = 106/509 (21%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV-----LKNAELKFN 241 +D LD + V+ + G D G +K + L EL Sbjct 2 AENDVDNELLDYEDDEVE-TAAGAD-GTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRA 59 Query 242 FGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 + F+ P + G L +A G K+ A + Q + + L+ Sbjct 60 IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLV 118 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRL 350 + +RELA Q ++F KY+ P ++ + GG++ + VL+ IVVGTPGR+ Sbjct 119 MCHTRELAFQISKEYERFSKYM--PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L LNL ++ +LDE D +L + R +I ++T K QV++ SATL Sbjct 177 LALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL 231 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 S +++ + K M P + + E + L + +++ D Sbjct 232 -SKEIRPVCRKFMQDPMEIFVDDETKL-----------------TLHGLQQYYVKLKDNE 273 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + + +Q +IF ++ C L Q ++Q Sbjct 274 ----------------------KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ- 310 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F + +H ER ++FK R L+ T++ RG+DI V N Sbjct 311 --------NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +P++ Y+HR+ R GR GLAI+ V+ E Sbjct 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDE---------------------------- 394 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 N+ ++L+++++ IS++ +I + Sbjct 395 ---NDAKILNDVQDRFEVNISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|Q6BZ77|DBP3_DEBHA ATP-dependent RNA helicase DBP3 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP3 PE=3 SV=1 Length=527 Score = 288 bits (737), Expect = 2e-87, Method: Composition-based stats. Identities = 102/382 (27%), Positives = 165/382 (43%), Gaps = 60/382 (16%) Query 256 VALSKAPDGYIVKS-QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYID 314 + +++ G + N +T K K L + P+RELA Q +N+ Sbjct 158 IGVAETGSGKTFAFGVPAINNILTHDK---KGLKVLCISPTRELALQIYDNLVDL---TA 211 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 N L+ + + GGV+ +Q+S L N +VV TPGRL DL++ G L+L + +LVLDEAD Sbjct 212 NTPLKCVAVYGGVSKHEQVSSLRN-ASVVVATPGRLIDLLNDGALSLDSIEYLVLDEADR 270 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 +L +G+ I + Q Q ++ +AT +V++L+ M+ P V + Sbjct 271 MLEKGFEQDIKSVMQQTNHA-----NRQTLMFTATWPK-EVRELASTFMNSPVKVSIGDR 324 Query 435 D--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + S + +V + P + K L Sbjct 325 NELSANKRITQIVEVIEP-----------------------------------YDKEKKL 349 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 +K D+ +IF K + +E ++ + F +HGD Sbjct 350 LSLLRKYQSGSNKDDKVLIFALYKKEATRIENLLVR---------NSFKVSAVHGDLSQQ 400 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 +R L FK G L+ TDVAARG+DI V VIN+T P ++YVHRIGR GRA + Sbjct 401 QRTSALGAFKAGKTTLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQT 460 Query 613 GLAISLVATEKEKVWYHVCSSR 634 G+A +L ++ + + + Sbjct 461 GIAHTLFTEHEKHLSGALMNVL 482 Score = 96.7 bits (239), Expect = 1e-19, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 54/136 (40%), Gaps = 20/136 (15%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + IA + + + PT IQA S P +L G DV+ AETGSGKT AF +P I Sbjct 121 FDQIDLDSRIASVISK--FPTPTPIQAVSWPYLLSGKDVIGVAETGSGKTFAFGVPAINN 178 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC----------QS 113 + K KG + S + + YD + C Q Sbjct 179 ILTHDK------KGLKVLC--ISPTRELALQIYDNLVDLTANTPLKCVAVYGGVSKHEQV 230 Query 114 REVKEWHGCRATKGLM 129 ++ AT G + Sbjct 231 SSLRNASVVVATPGRL 246 >sp|A7TJM9|DRS1_VANPO ATP-dependent RNA helicase DRS1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DRS1 PE=3 SV=1 Length=752 Score = 294 bits (753), Expect = 2e-87, Method: Composition-based stats. Identities = 95/486 (20%), Positives = 183/486 (38%), Gaps = 67/486 (14%) Query 200 KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 + L L+ + + + +++A + +A + Sbjct 224 EATSTVHSTFNSLTLSRPVLKGLSDLGYTKPSPIQSATIPIGLS--------GKDIIAGA 275 Query 260 KAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 G ++ + + +++ P+RELA Q + K+ KY+ L Sbjct 276 VTGSGKTAAFMIPIIERLLYKPAKVASTRVIVLTPTRELAIQIADVGKKIGKYVSG--LT 333 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQ 378 L +GG+ R Q L+ DIV+ TPGR D V ++ N+ V LV+DEAD +L + Sbjct 334 FGLAVGGLNLRQQEQELKTRPDIVIATPGRFIDHVRNSSSFNVDSVEVLVMDEADRMLEE 393 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 G+ + +N + +P + Q ++ SAT++S +K L + P + + Sbjct 394 GFQEELNEILTLLP------SKRQTLLFSATMNSR-IKSLISLSLRKPVRIMINPPKQAA 446 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 + V + + L Y + Sbjct 447 ARLTQEFVRIRKRDHLKPALLF-----------------------------------YLI 471 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 R + + ++F K L G LHG +R Q++ Sbjct 472 RKLDGTGQKRIVVFVARKEMAHKLRIILGLLG---------MKVGELHGSLTQEQRLQSV 522 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 FK +V LICTD+A+RG+DI + VIN +P + Y+HR+GR RA R G +++ Sbjct 523 NNFKSLEVPVLICTDLASRGLDIPKIEVVINFDMPKSYEIYLHRVGRTARAGREGRSVTF 582 Query 619 V--ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 V +++ + S + ++ + + + +++ +++ E TI + + Sbjct 583 VGESSQDRSIVRSAIKSVEE---SSSKNKAVSRNVEWTQIEETNKLVESFGETIDDILVE 639 Query 677 IKVPVD 682 K + Sbjct 640 EKQEKE 645 Score = 105 bits (262), Expect = 4e-22, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 6/108 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+ + + + + + ++ + P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I Sbjct 231 STFNSLTLSRPVLKGLSDLGYTKPSPIQSATIPIGLSGKDIIAGAVTGSGKTAAFMIPII 290 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + K +T + + + D G GL Sbjct 291 ERLLYKP------AKVASTRVIVLTPTRELAIQIADVGKKIGKYVSGL 332 >sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus OX=10090 GN=Ddx46 PE=1 SV=2 Length=1032 Score = 300 bits (768), Expect = 2e-87, Method: Composition-based stats. Identities = 92/455 (20%), Positives = 178/455 (39%), Gaps = 71/455 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 G++ +I +K ++ + + ++K G + Sbjct 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMS--------GRDLIGIAKTGSGKTIAFLLP 429 Query 273 G--NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + ++ P A+I+ P+RELA Q K+F K + LR + + GG Sbjct 430 MFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLG---LRVVCVYGGTGIS 486 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 +Q++ L+ G +I+V TPGR+ D+++ NL +V ++VLDEAD + G+ + R+ Sbjct 487 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + Q ++ SAT ++ L+ +I+ P V + G V V V+ Sbjct 547 VDNV------RPDRQTVMFSATFPRA-MEALARRILSKPIEVQVGGRSVVCSDVEQQVIV 599 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + + L H + + Sbjct 600 IEEEKKFLKLLELLGHYQ---------------------------------------ESG 620 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 IIF + D L + ++ + C+ LHG ++R + FK G + Sbjct 621 SVIIFVDKQEHADGLLKDLMRA---------SYPCMSLHGGIDQYDRDSIINDFKNGTCK 671 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+D+ + V+N + P+ ++YVHR GR GRA G A + + ++ + Sbjct 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 + + + + + ++ + +I Sbjct 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKI 766 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 15/140 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + G+ +I ++++ + PT IQ ++IP I+ G D++ A+TGSGKT AF +P+ Sbjct 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLC 110 + + DQ+ ++G+ I + + + F+ G G+ Sbjct 431 FRHIM----DQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGIS 486 Query 111 CQSREVKE-WHGCRATKGLM 129 Q E+K T G M Sbjct 487 EQIAELKRGAEIIVCTPGRM 506 >sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio OX=7955 GN=ddx46 PE=2 SV=1 Length=1018 Score = 300 bits (767), Expect = 2e-87, Method: Composition-based stats. Identities = 92/455 (20%), Positives = 178/455 (39%), Gaps = 71/455 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 G++ ++ +K ++ + + ++K G + Sbjct 346 GISMKVLNALKKHNYEKPTPIQAQAIPAIMS--------GRDLIGIAKTGSGKTIAFLLP 397 Query 273 GNAQVTQTKFL--PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + + + P A+I+ P+RELA Q K+F K + LR + + GG Sbjct 398 MFRHILDQRPVGEAEGPLAVIMTPTRELALQITKECKKFSKSLA---LRVVCVYGGTGIS 454 Query 331 DQLSVLENGVDIVVGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 +Q++ L+ G +I+V TPGR+ D++ + NL +V ++V+DEAD + G+ + R+ Sbjct 455 EQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRI 514 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + Q ++ SAT ++ L+ +I+ P V + G V V V+ Sbjct 515 VDNV------RPDRQTVMFSATFPRT-MEALARRILSKPVEVQVGGRSVVCSDVEQHVIV 567 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + + L H + + Sbjct 568 IEEEKKFLKLLEILGHYQ---------------------------------------EKG 588 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 IIF + D L + ++ + C+ LHG ++R + FK G R Sbjct 589 SVIIFVDKQEHADGLLKDLMKA---------SYPCMSLHGGIDQYDRDSIINDFKNGACR 639 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+D+ + V+N + P+ ++YVHR GR GRA G A + + + + Sbjct 640 LLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQARYS 699 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 + + + + + T + + + +I Sbjct 700 GDILKALELSGSSVPAELEQLWTNFKEQQKAEGKI 734 Score = 110 bits (275), Expect = 1e-23, Method: Composition-based stats. Identities = 33/140 (24%), Positives = 64/140 (46%), Gaps = 15/140 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + + G+ ++ A+++ ++ PT IQA++IP I+ G D++ A+TGSGKT AF +P+ Sbjct 339 IKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 398 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLC 110 + + DQ+ + + + + + + F+ G G+ Sbjct 399 FRHIL----DQRPVGEAEGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGIS 454 Query 111 CQSREVKE-WHGCRATKGLM 129 Q E+K T G M Sbjct 455 EQIAELKRGAEIIVCTPGRM 474 >sp|Q9CJS1|RHLB_PASMU ATP-dependent RNA helicase RhlB OS=Pasteurella multocida (strain Pm70) OX=272843 GN=rhlB PE=3 SV=1 Length=423 Score = 285 bits (728), Expect = 2e-87, Method: Composition-based stats. Identities = 100/397 (25%), Positives = 163/397 (41%), Gaps = 59/397 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQV--TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYID 314 ++ G + + + Q P+ALI+ P+RELA Q N+ K Sbjct 51 GQAQTGTGKTMAFLTATFHHLLTQQGDKGGRQPRALILAPTRELAVQINNDAALLTK--- 107 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 L+ L GG QL +E GVDI++GT GR+ D V G + L +++ +VLDEAD Sbjct 108 ATGLKTGLAYGGDGYEKQLKAIEQGVDILIGTTGRVIDYVKQGIVRLDKIQVVVLDEADR 167 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 + G+ I + + P + ++ SATL S+ V++L+ + M+ P +V+++ Sbjct 168 MFDLGFIKDIRYLLRKCPA----PQHRLTMLFSATL-SYKVRELAFEDMNDPEYVEIEPL 222 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + E K Sbjct 223 QKTGHRIK----------------------------------------EELFYPSNQDKM 242 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + ++E ++ IIF TK C+++ Y G L GD +R Sbjct 243 ALLLTLLEEEWPERCIIFANTKHRCEDIWGYLAADG---------HRVGLLTGDVAQKKR 293 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 L++F +G + L+ TDVAARG+ I V +V N LPD++++YVHRIGR GRA G+ Sbjct 294 LSLLKQFTEGHLDILVATDVAARGLHISDVSHVFNYDLPDDREDYVHRIGRTGRAGESGV 353 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 +IS E + ++ T+ Sbjct 354 SISFACEEYAMNLPAIEEYISHSIPVSQYDVAALLTL 390 Score = 100 bits (250), Expect = 3e-21, Method: Composition-based stats. Identities = 61/347 (18%), Positives = 117/347 (34%), Gaps = 50/347 (14%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + ++ A++E + T IQA S+P+ L G DV A+TG+GKT AF + Sbjct 11 FSDLPLHHQVLAALQEKGFDYCTPIQALSLPMSLAGKDVAGQAQTGTGKTMAF----LTA 66 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + L QQ K G+ + + + + + + + G + Sbjct 67 TFHHLLTQQGDKGGRQPRALILAPTRELAVQINN--------------DAALLTKATGLK 112 Query 124 ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYG 183 + ++ +QG+ + +GT + G +K Sbjct 113 TGLAYGGDGYEKQLKAIEQGV----------DILIGTTGRVIDYVKQGIVRLDK------ 156 Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFG 243 + + D D+ F K+ + L P H K EL F Sbjct 157 IQVVVLDEADRMFDL-----GFIKDIRYLLRKCPAPQHRLTMLFSATLSYKVRELAFEDM 211 Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL 303 + + + + S A + + +I ++ Sbjct 212 NDPEYVEIEPLQKTGHRIKEELFYPSNQDKMALLLTLLEEEWPERCIIFANTK------- 264 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + + Y+ R L+ G VA + +LS+L+ +DI+V T Sbjct 265 HRCEDIWGYLAADGHRVGLLTGDVAQKKRLSLLKQFTEGHLDILVAT 311 >sp|A7TGW7|DBP10_VANPO ATP-dependent RNA helicase DBP10 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP10 PE=3 SV=1 Length=977 Score = 299 bits (765), Expect = 2e-87, Method: Composition-based stats. Identities = 107/472 (23%), Positives = 184/472 (39%), Gaps = 47/472 (10%) Query 195 YLDIDKGHVKFSKNGK--DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPK 252 Y I+ K G G + I ++ + ++ + K Sbjct 107 YFSINNSEKSKHKKGSFPSFGFSKLILSNVHKKGFRQPTPIQRKTIPLIL--------QK 158 Query 253 DGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 V +++ G ++ A +A+I+ PSRELA QT K+F K Sbjct 159 RDIVGMARTGSGKTAAFVLPMIEKLKSHSSKIGA-RAVILSPSRELALQTHRVFKEFSK- 216 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 LR +L+ GG + DQ S++ + D++V TPGR L L+L V ++V DEA Sbjct 217 --GTHLRSVLLTGGDSLEDQFSMMMSNPDVIVATPGRFLHLKVEMSLDLKTVEYVVFDEA 274 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D L G+ + +N + +P Q ++ SATL S V ++ + P V L Sbjct 275 DRLFEMGFQEQLNELLAALP------MNRQTLLFSATLPSSLV-DFAKAGLTNPVLVRLD 327 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 E + + + + + + + + D + ++ + S++ Sbjct 328 AETKISENLEILFLSTKNEERENNLLYLLQDVIKIPLGTDDQIKKLSDFNKSLSDSDSED 387 Query 493 KGEYAVRAIKEHKMDQ-----------------AIIFCRTKIDCDNLEQYFIQQGGGPDK 535 + + ++ K + I+F T+ + + Q G Sbjct 388 EDNKGKQNSRKSKKGKFQKLKVSASNELPTEKSTIVFAPTRHHVEYITQLLKDSG----- 442 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 F L+G H RK+ L F+ G L+ TDVAARG+DI + VIN +LP Sbjct 443 ----FLVSYLYGTLDQHARKRQLLNFRAGLTSILVVTDVAARGVDIPMLANVINYSLPAS 498 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDG 647 + ++HR+GR RA G A S+V+ + + GK T + E Sbjct 499 SKIFIHRVGRTARAGNRGWAYSIVSETELPYMLDLELFLGKKILLTSMYEAS 550 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 30/105 (29%), Positives = 47/105 (45%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F G I V + + PT IQ ++IPLIL D++ A TGSGKT AF +P+I+ Sbjct 122 SFPSFGFSKLILSNVHKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIE 181 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + K G + S + + + F+ G+ Sbjct 182 KLKSHS-----SKIGARAV--ILSPSRELALQTHRVFKEFSKGTH 219 >sp|Q75F95|DRS1_EREGS ATP-dependent RNA helicase DRS1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DRS1 PE=3 SV=1 Length=734 Score = 294 bits (752), Expect = 2e-87, Method: Composition-based stats. Identities = 99/479 (21%), Positives = 180/479 (38%), Gaps = 64/479 (13%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 L L+ + + ++ A + +A + G Sbjct 219 STFNSLSLSRPVLKGLAALGYTKPSPIQGATIPIAL--------LGKDVIAGAVTGSGKT 270 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + + L++ P+RELA Q + K+ K++ L L +GG Sbjct 271 AAFMIPIIERLLYKPAKIASTRVLVLTPTRELAIQVADVGKKLGKFVSG--LTFGLAVGG 328 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + R Q L+ DIV+ TPGR+ D + ++ ++ V LV+DEAD +L G+ D +N Sbjct 329 LNLRQQEQALKLRPDIVIATPGRIIDHIRNSASFSVDSVEVLVIDEADRMLEDGFQDELN 388 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + IP + Q ++ SAT++S +K+L + P + + + + Sbjct 389 EIMSLIP------SKRQTLLFSATMNSR-IKQLISLSLKKPVRIMIDPPKQAANKLTQEF 441 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + + L + +R + Sbjct 442 VRLRKREHLKPALL-----------------------------------YHLLRKLDSTG 466 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + ++F K L G LHG +R Q++ FK D Sbjct 467 QKRIVVFVARKEVAHRLRVILGLLG---------MKAGELHGSLTQEQRLQSVNNFKSLD 517 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV--ATEK 623 V L+CTD+A+RG+DI + VIN +P + Y+HR+GR RA R G +++LV +T++ Sbjct 518 VPVLVCTDLASRGLDIPKIEVVINYDMPKTYEIYLHRVGRTARAGREGKSVTLVGESTQE 577 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 + S + R E+ L + +E + I + E K + Sbjct 578 RSIVKDAIKSVDGSKGSGRACGRVVDWKQVEEIHKLVQAKEDVIGEILEEEKQEKEILR 636 Score = 105 bits (263), Expect = 2e-22, Method: Composition-based stats. Identities = 28/108 (26%), Positives = 48/108 (44%), Gaps = 6/108 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+ + + + + + + + P+ IQ +IP+ L G DV+ A TGSGKT AF IP+I Sbjct 219 STFNSLSLSRPVLKGLAALGYTKPSPIQGATIPIALLGKDVIAGAVTGSGKTAAFMIPII 278 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + K +T + + + D G GL Sbjct 279 ERLLYKP------AKIASTRVLVLTPTRELAIQVADVGKKLGKFVSGL 320 >sp|Q3T147|DX39B_BOVIN Spliceosome RNA helicase DDX39B OS=Bos taurus OX=9913 GN=DDX39B PE=2 SV=1 Length=428 Score = 285 bits (728), Expect = 2e-87, Method: Composition-based stats. Identities = 109/509 (21%), Positives = 193/509 (38%), Gaps = 106/509 (21%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV-----LKNAELKFN 241 +D LD + V+ + G D G +K + L EL Sbjct 2 AENDVDNELLDYEDDEVE-TAAGGD-GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRA 59 Query 242 FGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 + F+ P + G L +A G K+ A + Q + + L+ Sbjct 60 IVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLV 118 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRL 350 + +RELA Q ++F KY+ P ++ + GG++ + VL+ IVVGTPGR+ Sbjct 119 MCHTRELAFQISKEYERFSKYM--PSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRI 176 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L LNL ++ +LDE D +L + R +I ++T K QV++ SATL Sbjct 177 LALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL 231 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 S +++ + K M P + + E + L + +++ D Sbjct 232 -SKEIRPVCRKFMQDPMEIFVDDETKL-----------------TLHGLQQYYVKLKDNE 273 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + + +Q +IF ++ C L Q ++Q Sbjct 274 ----------------------KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ- 310 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F + +H ER ++FK R L+ T++ RG+DI V N Sbjct 311 --------NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +P++ Y+HR+ R GR GLAI+ V+ E Sbjct 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDE---------------------------- 394 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 N+ ++L+++++ IS++ +I + Sbjct 395 ---NDAKILNDVQDRFEVNISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|Q86XP3|DDX42_HUMAN ATP-dependent RNA helicase DDX42 OS=Homo sapiens OX=9606 GN=DDX42 PE=1 SV=1 Length=938 Score = 298 bits (763), Expect = 2e-87, Method: Composition-based stats. Identities = 96/390 (25%), Positives = 156/390 (40%), Gaps = 59/390 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKS-QHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLN 304 + ++K G + Q + P + P A+IV P+REL +Q Sbjct 285 PVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHA 344 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 K+F K + LR + + GG + +Q L+ G +IVV TPGRL D V NL +V Sbjct 345 ECKRFGKAYN---LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRV 401 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 +LV DEAD + G+ + + + + Q ++ SAT ++KL+ I+ Sbjct 402 SYLVFDEADRMFDMGFEYQVRSIASHV------RPDRQTLLFSATF-RKKIEKLARDILI 454 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 P V + V +V ++ + W L + Sbjct 455 DPIRVVQGDIGEANEDVTQIVEILHSGPSK-WNWLTR----------------------- 490 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 R ++ ++F K + + L Q+G + Sbjct 491 --------------RLVEFTSSGSVLLFVTKKANAEELANNLKQEG---------HNLGL 527 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHGD ER + + FKK D+ L+ TDVAARG+DI + VIN + + + HRIG Sbjct 528 LHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIG 587 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSR 634 R GRA G+A +L+ + + + Sbjct 588 RTGRAGEKGVAYTLLTPKDSNFAGDLVRNL 617 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + +P+ L G D++ A+TGSGKT AF P++ Sbjct 253 SSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPML 312 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + DQ+E + G I + + F Sbjct 313 IHIM----DQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKA 352 >sp|D0PV95|DDX3_CAEEL ATP-dependent RNA helicase laf-1 OS=Caenorhabditis elegans OX=6239 GN=laf-1 PE=1 SV=1 Length=708 Score = 293 bits (749), Expect = 2e-87, Method: Composition-based stats. Identities = 94/387 (24%), Positives = 152/387 (39%), Gaps = 65/387 (17%) Query 258 LSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 L PD SG + P AL++ P+REL+ Q N ++F Sbjct 294 LQDGPDAVHRSVTSSGGRKKQ-------YPSALVLSPTRELSLQIFNESRKFA---YRTP 343 Query 318 LRELLIIGG-VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 + L+ GG +DQ+ L G I++ TPGRL D++ G + + R+LVLDEAD +L Sbjct 344 ITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRML 403 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGED 435 G+ I ++ + + SAT +++ L++ + ++ + Sbjct 404 DMGFEPQIRQIVEC--NRMPSKEERITAMFSATFPK-EIQLLAQDFLKENYVFLAVGRVG 460 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 S + + +V V R Sbjct 461 STSENIMQKIVWVEEDEKR----------------------------------------S 480 Query 496 YAVRAIKEHKMDQ-AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 Y + + ++F TK +L Y +Q + V +HGD K ER Sbjct 481 YLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQ---------NYEVVTIHGDLKQFER 531 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 +++L+ F+ G L+ T VAARG+DI V +VIN LP + YVHRIGR GR +GL Sbjct 532 EKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGL 591 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNT 641 A S + + + + Sbjct 592 ATSFFNDKNRNIARELMDLIVEANQEL 618 Score = 109 bits (271), Expect = 3e-23, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 69/166 (42%), Gaps = 26/166 (16%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ FS++ + I + ++ + PT +Q SIP + GG D++ A+TGSGKT AF +P+ Sbjct 230 ISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPL 289 Query 61 IQIVYETLKD-------QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA---IGSDGLC 110 + + + D G+K + S + + ++ FA + L Sbjct 290 VNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALL 349 Query 111 CQSREVKEW---------HGCRATKGLMKGKHYYEVSCHDQGLCRV 147 RE + H AT G + + DQGL + Sbjct 350 YGGRENYKDQIHKLRLGCHILIATPGRL-------IDVMDQGLIGM 388 >sp|Q6CXT4|IF4A_KLULA ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TIF1 PE=3 SV=1 Length=396 Score = 283 bits (724), Expect = 3e-87, Method: Composition-based stats. Identities = 105/426 (25%), Positives = 178/426 (42%), Gaps = 71/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F LK L+ F +G E + + + + D +G A + Sbjct 24 FDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQN 83 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 AP+ LI+ P+RELA Q + ++D ++ IGG + ++ L G Sbjct 84 IDEKIKAPQGLILAPTRELALQIQKVVMALAIHMD---VKVHACIGGTSLQEDSEALRGG 140 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 I+VGTPGR+ D++ ++ +LDEAD +LS G+ + I + +P + Sbjct 141 AQIIVGTPGRVFDMIDRRIFKTDNIKMFILDEADEMLSTGFKEQIYNIFTMLPPTS---- 196 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + V V + Sbjct 197 --QVVLLSATMP-GDVLEVTSKFMKDPVRILVKKDELTLEGIGQYYVNVEEEQ------- 246 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 K + + QA+IFC T+ Sbjct 247 --------------------------------YKYDCLTDLYDSISVTQAVIFCNTRRKV 274 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + + + F+ ++ D + ER ++ F+ G R LI TD+ ARGI Sbjct 275 EELTERLRE---------NNFTVSAIYSDLQQQERDTIMKEFRSGSSRILISTDLLARGI 325 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP K+NY+HRIGR GR R G+AI+ V + + + Y Sbjct 326 DVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGIAINFVTNKDIGAMREL-----ERFY 380 Query 640 NTRLKE 645 +T+++E Sbjct 381 STQIEE 386 Score = 95.6 bits (236), Expect = 1e-19, Method: Composition-based stats. Identities = 28/105 (27%), Positives = 49/105 (47%), Gaps = 9/105 (9%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++ + E+ + + ++ P+ IQ +I I+ G DVL A++G+GKTG FSI +Q Sbjct 23 SFDDLKLKEELLRGIFGYGFVEPSAIQQRAILPIIEGKDVLAQAQSGTGKTGTFSIAALQ 82 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + E +K Q + + + A AI D Sbjct 83 NIDEKIKAPQ---------GLILAPTRELALQIQKVVMALAIHMD 118 >sp|A7ESL7|DBP10_SCLS1 ATP-dependent RNA helicase dbp10 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp10 PE=3 SV=2 Length=920 Score = 297 bits (761), Expect = 3e-87, Method: Composition-based stats. Identities = 108/420 (26%), Positives = 163/420 (39%), Gaps = 36/420 (9%) Query 221 HMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQT 280 +K F A L + LK + F P + D V + T Sbjct 83 SVKKGGGFQAMGLNSHLLK-AISRKGFNVPTPIQRKTIPLVLDNQDVVGMARTGSGKTAA 141 Query 281 KFLPN-----------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 +P +ALI+ PSRELA QTL +K+F + L+ +L++GG + Sbjct 142 FVIPMIEKLRAHSVRVGARALIMSPSRELALQTLKVVKEFGR---GTDLKCVLLVGGDSL 198 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 +Q + DIV+ TPGR L L+LS ++++V DEAD L G++ + + + Sbjct 199 EEQFGFMAANPDIVIATPGRFLHLKVEMSLDLSSMKYVVFDEADRLFEMGFAAQLGEILH 258 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 +P Q ++ SATL V+ + + P+ V L E V + V Sbjct 259 ALPIS------RQTLLFSATLPKSLVE-FARAGLQEPSLVRLDAESKVSPDLQSAFFSVK 311 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 HI D V A + + + + +K + Sbjct 312 GAEKEG----ALLHILQDLVKMPTGLPENALNATDNFSKKRKRGPDGPTKKLKPTE-HST 366 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIF TK D L G F+ +G R +E F+ G L Sbjct 367 IIFAATKHHVDYLASLLRMSG---------FAVSHAYGSLDQTARNIQVEDFRTGKSNIL 417 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TDVAARGIDI + VIN P + + +VHR+GR RA + G + SLV Sbjct 418 VVTDVAARGIDIPVLANVINYDFPPQPKVFVHRVGRTARAGQRGWSYSLVRDTDAPYLLD 477 Score = 101 bits (251), Expect = 9e-21, Method: Composition-based stats. Identities = 32/108 (30%), Positives = 50/108 (46%), Gaps = 7/108 (6%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + +PT IQ ++IPL+L DV+ A TGSGKT AF IP+I+ Sbjct 90 FQAMGLNSHLLKAISRKGFNVPTPIQRKTIPLVLDNQDVVGMARTGSGKTAAFVIPMIEK 149 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + + G + S + + F G+D C Sbjct 150 LRAH--SVRVGAR-----ALIMSPSRELALQTLKVVKEFGRGTDLKCV 190 >sp|Q6GWX0|DDX4_PIG Probable ATP-dependent RNA helicase DDX4 OS=Sus scrofa OX=9823 GN=DDX4 PE=2 SV=1 Length=722 Score = 293 bits (749), Expect = 4e-87, Method: Composition-based stats. Identities = 95/412 (23%), Positives = 162/412 (39%), Gaps = 69/412 (17%) Query 252 KDGFVALSKAPDGYIVKSQHSGNA-----QVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 +A ++ G A +T ++F P+ +IV P+REL Q Sbjct 323 GRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLE 382 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++F +R ++I GG + + G +I+ TPGRL D++ K+ L Q++ Sbjct 383 ARKFS---FGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIK 439 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH- 424 +LVLDEAD +L G+ + ++ + ++ Q ++ SAT ++++L+ + + Sbjct 440 YLVLDEADRMLDMGFGPEMKKLISC--PGMPSKEQRQTLMFSATFP-EEIQRLAAEFLKS 496 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 +V + V + V + R Sbjct 497 NYLFVAVGQVGGACRDVQQADLQVGQYSKR------------------------------ 526 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 E + ++ ++ ++F TK D + + Q+ + S Sbjct 527 ----------EKLLEILRNIGDERTMVFVETKKKADFIATFLCQE---------KISTTS 567 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 +HGDR+ ER+Q L F+ G L+ T VAARG+DI V +VIN LP YVHRIG Sbjct 568 IHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIG 627 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM 656 R GR G AIS E + + + W E+ Sbjct 628 RTGRCGNTGRAISFFDLESD-------NHLAQPLVKVLTDAQQDVPAWLEEI 672 Score = 105 bits (262), Expect = 3e-22, Method: Composition-based stats. Identities = 25/106 (24%), Positives = 46/106 (43%), Gaps = 0/106 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + + + T +Q SIP+IL G D++ A+TGSGKT AF +P+ Sbjct 285 ILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPI 344 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + K+ + + + Y F+ G+ Sbjct 345 LAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGT 390 >sp|Q879Y6|RHLB_XYLFT ATP-dependent RNA helicase RhlB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) OX=183190 GN=rhlB PE=3 SV=1 Length=543 Score = 288 bits (736), Expect = 4e-87, Method: Composition-based stats. Identities = 102/431 (24%), Positives = 164/431 (38%), Gaps = 70/431 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 N L + + ++ L ++ G Sbjct 9 LNFSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALA--------GRDIAGQAQTGTGKT 60 Query 267 VKSQHSGNAQVTQTKFL----PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 + ++ + L P P+ALI+ P+RELA Q N+ +F N LR L Sbjct 61 LAFLVVVVNRLLSSPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFG---GNLGLRFAL 117 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYS 381 I GGV Q +L G D+V+ TPGRL D + + ++L VLDEAD + G+ Sbjct 118 IYGGVDYDRQREMLRKGADVVIATPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFI 177 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I + ++P+ S Q ++ SATL S V +L+ + M+ P + + E V Sbjct 178 KDIRFILRRLPERCS----RQTLLFSATL-SHRVLELAYEYMNEPEKLVAETESVTTTRV 232 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + + K + + Sbjct 233 RQRIYFPAEEE----------------------------------------KIPLLLGLL 252 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 ++ + ++F TK+ + + + + G + L GD +R+ L RF Sbjct 253 SRNEGMRTMVFVNTKVFVEGVARALDEAG---------YRVGVLSGDVPQRKRETLLNRF 303 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 +KG + L+ TDVAARG+ I GV YV N LP + ++YVHRIGR R G AIS Sbjct 304 QKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISFACE 363 Query 622 EKEKVWYHVCS 632 + + Sbjct 364 RYAMSLPDIEA 374 Score = 101 bits (251), Expect = 4e-21, Method: Composition-based stats. Identities = 55/360 (15%), Positives = 113/360 (31%), Gaps = 73/360 (20%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + P + + + L T IQA ++P+ L G D+ A+TG+GKT AF + V+ Sbjct 11 FSSFDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNR 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDR--------GSAFAIGSDGLCCQSRE 115 + + + + + + + Y+ G FA+ G+ + Sbjct 71 LLSSPGLVNRNPEDPRAL--ILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDRQR 128 Query 116 ---VKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGK 172 K AT G + + + +C + LD F GF Sbjct 129 EMLRKGADVVIATPGRLID-YLKQHEVVSLRVCEI------CVLDEADRMFDLGFI---- 177 Query 173 KSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV 232 ++F +P Q L + Sbjct 178 ----------------------------KDIRFILR--------RLPERCSRQTLLFSAT 201 Query 233 LKNA--ELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKAL 290 L + EL + + E K + V ++ ++ + + + Sbjct 202 LSHRVLELAYEYMNEPEKLVAETESVTTTRVRQRIYFPAEEEKIPLLLGLLSRNEGMRTM 261 Query 291 IVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ ++ + +D R ++ G V R + ++L ++I+V T Sbjct 262 VFVNTK-------VFVEGVARALDEAGYRVGVLSGDVPQRKRETLLNRFQKGQLEILVAT 314 >sp|Q6C0X2|DHH1_YARLI ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DHH1 PE=3 SV=1 Length=522 Score = 287 bits (734), Expect = 4e-87, Method: Composition-based stats. Identities = 106/484 (22%), Positives = 184/484 (38%), Gaps = 88/484 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +D L E+ + ++ + G L++A +G K Sbjct 30 FEDFFLKRELLMGIFEAGFENPSPIQEEAIPIAL----------AGRDILARAKNG-TGK 78 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + Q N +ALI+ P+RELA QT K K++ ++ ++ GG Sbjct 79 TAAFVIPALQQVNPKVNKIQALIMVPTRELALQTSQVCKTLGKHLG---IKVMVTTGGTN 135 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 RD + LE+ V ++VGTPGR+ DL G +LS+ ++DEAD LLS ++ I ++ Sbjct 136 LRDDIMRLEDTVHVLVGTPGRVLDLAGKGVADLSESPMFIMDEADKLLSPDFTPIIEQVL 195 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + P + Q+++ SAT VK ++ +H P ++L ++ + V Sbjct 196 HFFP------EDRQILLFSATFP-LTVKAFMDRNLHKPYEINLM-DELTLRGITQYYAFV 247 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K K + ++Q Sbjct 248 DEKQ----------------------------------------KLHCLNTLFSKLDINQ 267 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 +IIFC + + + L + + G +SC H R + F+ G R Sbjct 268 SIIFCNSTVRVELLARKITELG---------YSCYYSHAKMIQSHRNRVFHEFRNGTCRN 318 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+C+D+ RGIDI V VIN P + Y+HRIGR GR +G+AI+L+ Y Sbjct 319 LVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGIAINLINWNDRYNLY 378 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKV 688 + G + ++I+++L S P+ + Sbjct 379 KIEQELGT-----------------EIKPIPAQIDKNLYVAESSENIPRPFPIADMPRGK 421 Query 689 TYGQ 692 + Sbjct 422 ESKR 425 Score = 100 bits (248), Expect = 1e-20, Method: Composition-based stats. Identities = 25/93 (27%), Positives = 40/93 (43%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ + E + P+ IQ E+IP+ L G D+L A+ G+GKT AF IP + Sbjct 28 TGFEDFFLKRELLMGIFEAGFENPSPIQEEAIPIALAGRDILARAKNGTGKTAAFVIPAL 87 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 Q V + Q + + Sbjct 88 QQVNPKVNKIQ---------ALIMVPTRELALQ 111 >sp|Q0TXZ2|SUB2_PHANO ATP-dependent RNA helicase SUB2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=SUB2 PE=3 SV=1 Length=438 Score = 284 bits (726), Expect = 5e-87, Method: Composition-based stats. Identities = 97/418 (23%), Positives = 164/418 (39%), Gaps = 72/418 (17%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY---------IVKSQHSGNAQVTQT-- 280 L EL + F+ P + V + +A G + K+ A + Q Sbjct 57 FLLKDELVRAITDCGFEHPSEVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATLQQMDE 116 Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG- 339 K P L++ +RELA Q N +F K++ P ++ + GG + +L N Sbjct 117 KPEPGVASILVMCHTRELAYQIRNEYNRFAKFL--PDVKVGVFYGGTPVAKDIELLSNKD 174 Query 340 --VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 I+VGTPGR++ LV L L+ ++ VLDE D +L + I + T Sbjct 175 THPHIIVGTPGRINALVRDRHLRLANLKHFVLDECDKMLD---QPDMRNDVQAIFRATPA 231 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLW 456 K QV++ SATL S +++ + +K M P + + E + V ++ + Sbjct 232 HK--QVMMFSATL-SKEIRAVCKKFMQNPLEIYVDDEKKLTLHGLQQFYVKLDERE---- 284 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 K + + +Q IIF R+ Sbjct 285 ------------------------------------KNRKLNDLLDNLEFNQVIIFVRST 308 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + C L++ + F +H ER + + FK+ R + TD+ Sbjct 309 LRCTELDKLLRE---------CNFPSTAVHSGIGQEERIKRYKEFKEFQTRICVSTDIFG 359 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 RGID+ + IN +PD+ Y+HR+GR GR GL+IS V+++ ++ R Sbjct 360 RGIDVERINVAINYDMPDKADAYLHRVGRAGRFGTKGLSISFVSSQDDEAVLKAIEER 417 Score = 79.0 bits (193), Expect = 4e-14, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 42/103 (41%), Gaps = 7/103 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q +IP + G DVL A++G GKT F + + Sbjct 52 TGFRDFLLKDELVRAITDCGFEHPSEVQQVTIPQAILGNDVLCQAKSGLGKTAVFVLATL 111 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + E + + + + FA Sbjct 112 QQMDEK-------PEPGVASILVMCHTRELAYQIRNEYNRFAK 147 >sp|Q6C7X8|DBP10_YARLI ATP-dependent RNA helicase DBP10 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP10 PE=3 SV=1 Length=926 Score = 297 bits (760), Expect = 5e-87, Method: Composition-based stats. Identities = 108/444 (24%), Positives = 172/444 (39%), Gaps = 41/444 (9%) Query 221 HMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQT 280 K+ F L LK N + FK P + +G V + T Sbjct 97 GKKSSGSFAGLGLSQLVLK-NIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAA 155 Query 281 KFLPN-----------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 LP +A+I+ PSRELA QTL +K F LR +++GG + Sbjct 156 FVLPMLEKLKVHSAKVGARAVILSPSRELALQTLKVVKDFSA---GTDLRLAMLVGGDSL 212 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 +Q ++ + DI++ TPGR L +L+L+ V ++ DEAD L G+ + +N + Sbjct 213 EEQFKMMMSNPDIIIATPGRFLHLKVEMELSLASVEYICFDEADRLFELGFGEQMNELLA 272 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 +P Q ++ SATL V+ ++ +H P V L E +P+ + V Sbjct 273 SLP------SNRQTLLFSATLPKTLVE-FAKAGLHDPILVRLDAETKLPEHLEMTFFAVK 325 Query 450 PK----------TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + + + + E + K E Sbjct 326 ENQRDACLAFILKEVIQMPFATPEQLKELERLDERAIDDGERDEDRKQKRPKFKKERLPP 385 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 A + I+FC TK + + G ++ ++G H RK L Sbjct 386 AHQLPSEKSTIVFCPTKHHVEYVIVLLQTLG---------YAVSYIYGTLDQHARKNQLY 436 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 RF+ G L+ TDVAARGID+ + VIN +LP + ++HR+GR RA G A S++ Sbjct 437 RFRTGKTSILVVTDVAARGIDVPVLANVINYSLPPSPKVFIHRVGRTARAGNRGWAYSII 496 Query 620 ATEKEKVWYHVCSSRGKGCYNTRL 643 + G+ RL Sbjct 497 KDNDIPYLLDLEVFLGRKLLTPRL 520 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 29/105 (28%), Positives = 51/105 (49%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ +G+ + + + + PT IQ ++IPL+L G DV+ A TGSGKT AF +P+++ Sbjct 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + K G + S + + F+ G+D Sbjct 163 KL-----KVHSAKVGARAV--ILSPSRELALQTLKVVKDFSAGTD 200 >sp|Q757U8|DBP10_EREGS ATP-dependent RNA helicase DBP10 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP10 PE=3 SV=1 Length=960 Score = 297 bits (761), Expect = 5e-87, Method: Composition-based stats. Identities = 99/447 (22%), Positives = 175/447 (39%), Gaps = 38/447 (9%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 GL+ I ++ + ++ + + V +++ G Sbjct 122 FASFGLSKFILGNISRKGFRQPTPIQRKTIPLIL--------QQRDIVGMARTGSGKTAA 173 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ A +A+I+ PSRELA QT K+F K LR +L+ GG Sbjct 174 FVLPLIEKLKMHSAKIGA-RAMILSPSRELAMQTHKVFKEFAK---GSNLRSVLLTGGDG 229 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 DQ S++ + D+++ TPGR L L+L + ++V DEAD L G+ + +N + Sbjct 230 LEDQFSMMMSNPDVIIATPGRFLHLKVEMNLDLHSIEYVVFDEADRLFEMGFQEQLNELL 289 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P Q ++ SATL S V ++ + P V L E V + + + + V Sbjct 290 GSLPTA------RQTLLFSATLPSSLV-DFAKAGLTNPVLVRLDTETKVSENLEMLFLSV 342 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM-- 506 + V ++ + ++ + + K + Sbjct 343 KNDEREANLLYLLQEVIKIPVATEEQLQRFRKQSNDDADDSDDETDKKKKHSKKSKQPLP 402 Query 507 --------DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + IIF T+ + + G + L+G H R+Q L Sbjct 403 SAKDMPSPNSTIIFVSTRHHVEYVSNLLKDCG---------YLVSYLYGTLDQHARRQQL 453 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 F+ G L+ TDVAARG+DI + V+N++LP + +VHR+GR RA G A ++ Sbjct 454 HNFRCGLTNILVVTDVAARGVDIPLLANVVNMSLPASSKIFVHRVGRTARAGNKGWAYTI 513 Query 619 VATEKEKVWYHVCSSRGKGCYNTRLKE 645 ++ + + GK T + E Sbjct 514 LSESELPYLLDLELFLGKKVLLTPMYE 540 Score = 105 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 49/105 (47%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ I + + PT IQ ++IPLIL D++ A TGSGKT AF +P+I+ Sbjct 121 SFASFGLSKFILGNISRKGFRQPTPIQRKTIPLILQQRDIVGMARTGSGKTAAFVLPLIE 180 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + K G + S + M + FA GS+ Sbjct 181 KL-----KMHSAKIGARAM--ILSPSRELAMQTHKVFKEFAKGSN 218 >sp|Q09181|DHH1_SCHPO Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ste13 PE=3 SV=1 Length=485 Score = 285 bits (730), Expect = 5e-87, Method: Composition-based stats. Identities = 106/420 (25%), Positives = 172/420 (41%), Gaps = 64/420 (15%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L++A +G K+ + + + + LI+ P+RELA QT K K++ Sbjct 81 GRDILARAKNG-TGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHM 139 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 + ++ ++ GG RD + L + V IVVGTPGR+ DL G + S+ V+DEAD Sbjct 140 N---VKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSECTTFVMDEAD 196 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LLS ++ I ++ + P K Q+ + SAT VK +K ++ P ++L Sbjct 197 KLLSPEFTPIIEQLLSYFP------KNRQISLYSATFP-LIVKNFMDKHLNKPYEINLM- 248 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 ++ V V+ S+ + L Sbjct 249 DELTLRGVTQYYAFVDE-----------------------------------SQKVHCLN 273 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + + +++Q+IIFC + + L + + G +SC H Sbjct 274 TLF-----SKLQINQSIIFCNSTNRVELLAKKITELG---------YSCFYSHAKMLQSH 319 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F+ G R L+C+D+ RGIDI V VIN P + Y+HRIGR GR G Sbjct 320 RNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRG 379 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 LAIS ++ Y + + G D ++ N +I L + QV Sbjct 380 LAISFISWADRFNLYRIENELGTEIQPIPPSIDPSLYVFPNGD---YQIPRPLTASADQV 436 Score = 98.3 bits (243), Expect = 3e-20, Method: Composition-based stats. Identities = 25/93 (27%), Positives = 39/93 (42%), Gaps = 9/93 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ + E + P+ IQ ESIP+ L G D+L A+ G+GKT AF IP + Sbjct 44 TEFEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSL 103 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + V Q + + Sbjct 104 EKVDTKKSKIQT---------LILVPTRELALQ 127 >sp|Q5F485|DDX42_CHICK ATP-dependent RNA helicase DDX42 OS=Gallus gallus OX=9031 GN=DDX42 PE=2 SV=1 Length=944 Score = 297 bits (760), Expect = 5e-87, Method: Composition-based stats. Identities = 95/390 (24%), Positives = 154/390 (39%), Gaps = 59/390 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKS-QHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLN 304 + ++K G + Q + P + P A+IV P+REL +Q + Sbjct 285 PVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHS 344 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 K+F K + LR + + GG + +Q L+ G +IVV TPGRL D V NL +V Sbjct 345 ECKRFGKAYN---LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRV 401 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 +LV DEAD + G+ + + + + Q ++ SAT ++KL+ I+ Sbjct 402 TYLVFDEADRMFDMGFEYQVRSIASHV------RPDRQTLLFSATF-RKKIEKLARDILI 454 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 P V + V +V + P W L + Sbjct 455 DPIRVVQGDIGEANEDVTQIV-EIFPSGPSKWNWLTR----------------------- 490 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 R ++ ++F K + + L Q+ + Sbjct 491 --------------RLVEFTSSGSVLLFVTKKANAEELANNLKQE---------DHNLGL 527 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHGD ER + + FKK + L+ TDVAARG+DI + VIN + + + HRIG Sbjct 528 LHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIG 587 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSR 634 R GRA G+A +L+ + + + Sbjct 588 RTGRAGEKGVAYTLLTPKDSNFAGDLVRNL 617 Score = 105 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 4/104 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + +P+ + G D++ A+TGSGKT AF P++ Sbjct 253 SSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPML 312 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + DQ+E + G I + + F Sbjct 313 IHIM----DQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKA 352 >sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii OX=9601 GN=DDX46 PE=2 SV=1 Length=1032 Score = 298 bits (764), Expect = 6e-87, Method: Composition-based stats. Identities = 92/455 (20%), Positives = 177/455 (39%), Gaps = 71/455 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 G++ +I +K ++ + + ++K G + Sbjct 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMS--------GRDLIGIAKTGSGKTIAFLLP 429 Query 273 G--NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + ++ P A+I+ P+RELA Q K+F K + LR + + GG Sbjct 430 MFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLG---LRVVCVYGGTGIS 486 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 +Q++ L+ G +I+V TPGR+ D+++ NL +V ++VLDEAD + G+ + R+ Sbjct 487 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 546 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + Q ++ SAT ++ L +I+ P V + G V V V+ Sbjct 547 VDNV------RPDRQTVMFSATFPRA-MEALVRRILSKPIEVQVGGRSVVCSDVEQQVIV 599 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + + L H + + Sbjct 600 IEEEKKFLKLLELLGHYQ---------------------------------------ESG 620 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 IIF + D L + ++ + C+ LHG ++R + FK G + Sbjct 621 SVIIFVDKQEHADGLLKDLMRA---------SYPCMSLHGGIDQYDRDSIINDFKNGTCK 671 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ T VAARG+D+ + V+N + P+ ++YVHR GR GRA G A + + ++ + Sbjct 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 + + + + + ++ + +I Sbjct 732 GDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKI 766 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 15/140 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ + G+ +I ++++ + PT IQ ++IP I+ G D++ A+TGSGKT AF +P+ Sbjct 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLC 110 + + DQ+ ++G+ I + + + F+ G G+ Sbjct 431 FRHIM----DQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGIS 486 Query 111 CQSREVKE-WHGCRATKGLM 129 Q E+K T G M Sbjct 487 EQIAELKRGAEIIVCTPGRM 506 >sp|P23128|DDX6_DROME ATP-dependent RNA helicase me31b OS=Drosophila melanogaster OX=7227 GN=me31B PE=1 SV=3 Length=459 Score = 284 bits (727), Expect = 7e-87, Method: Composition-based stats. Identities = 98/409 (24%), Positives = 168/409 (41%), Gaps = 69/409 (17%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGY-IVKSQHSGNAQ--------VTQTKFLPNA 286 EL E+ ++ P A+ A G ++ +G + + Q + Sbjct 67 RELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQIDPTKDY 126 Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 +AL++ P+RELA QT + K++D +R ++ GG +D + + V +++ T Sbjct 127 IQALVMVPTRELALQTSQICIELAKHLD---IRVMVTTGGTILKDDILRIYQKVQLIIAT 183 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 PGR+ DL+ ++S R LVLDEAD LLS + ++ + ++P K Q+++ Sbjct 184 PGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLP------KDPQILLF 237 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SAT VK EK + P ++L E+ V V + Sbjct 238 SATFP-LTVKNFMEKHLREPYEINLM-EELTLKGVTQYYAFVQERQ-------------- 281 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 K + +++Q+IIFC + + L + Sbjct 282 --------------------------KVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKI 315 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G + C +H R + F++G R L+C+D+ RGID+ V Sbjct 316 TELG---------YCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTRGIDVQAVNV 366 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 VIN P + Y+HRIGR GR +G+AI+L+ E + + G Sbjct 367 VINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELG 415 Score = 96.0 bits (237), Expect = 1e-19, Method: Composition-based stats. Identities = 35/148 (24%), Positives = 59/148 (40%), Gaps = 8/148 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E + E+ + E W P+ IQ +IP+ L G DVL A+ G+GKTGA+ IPV++ Sbjct 60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 119 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNK--WQMNPYDRGSAFAIGSDGLCCQS--REVKEW 119 + T Q + A ++ ++ + + R ++ Sbjct 120 IDPTKDYIQALV--MVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKV 177 Query 120 HGCRATKGLMKGKHYYEVSCHDQGLCRV 147 AT G + + D CR+ Sbjct 178 QLIIATPGRILD--LMDKKVADMSHCRI 203 >sp|Q7S5R1|DBP3_NEUCR ATP-dependent RNA helicase dbp-3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-3 PE=3 SV=1 Length=614 Score = 289 bits (739), Expect = 7e-87, Method: Composition-based stats. Identities = 112/397 (28%), Positives = 174/397 (44%), Gaps = 50/397 (13%) Query 246 EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--------APKALIVEPSRE 297 F + +++ G + + ++ P P+A+IV P+RE Sbjct 211 PFSL-SGRDVIGIAETGSGKTMAF-SLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRE 268 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVVGTPGRLDDLVS 355 LA QT + + L + I GG +Q ++L NGVDI+ TPGRL D +S Sbjct 269 LAMQTHAALSGLASLVG---LSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLS 325 Query 356 TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV 415 G ++L+ V F VLDEAD +L +G+S+ I + + P ++ Q ++ +AT D+ Sbjct 326 EGSISLANVSFAVLDEADRMLDRGFSEDIKLILSGCP----PKEQRQTLMFTATWP-LDI 380 Query 416 KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNT 475 +KL+E M P V + L + V D Sbjct 381 QKLAESYMINPAQVTIGHRTRAG----------GDGEGNGNIELQANSRIEQKVEVVDPR 430 Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 E+ EA K K D+ ++FC K + +EQ+ ++G Sbjct 431 GKEFRLYELLKEAQK-----------GSQKDDRILVFCLYKKEAVRVEQFLSRKG----- 474 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 +HGD + +R ++LE FK G L+ TDVAARG+DI V VINVT P Sbjct 475 ----IKVASIHGDLRQDQRTRSLEAFKSGTTTVLVATDVAARGLDIPEVKLVINVTFPLT 530 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 ++YVHRIGR GRA ++G AI+L + + + Sbjct 531 IEDYVHRIGRTGRAGKLGKAITLFTEHDKAHSGSLVN 567 Score = 92.1 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 30/105 (29%), Positives = 47/105 (45%), Gaps = 2/105 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS++ I++ + PT IQ+ S P L G DV+ AETGSGKT AFS+P Sbjct 179 IMNFSQLPQSNLISKNPFAA-YTNPTPIQSASWPFSLSGRDVIGIAETGSGKTMAFSLPC 237 Query 61 IQIVYETLKDQQEGK-KGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 ++ + K + + + S + M + S A Sbjct 238 VESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHAALSGLAS 282 >sp|A6SFV4|DBP8_BOTFB ATP-dependent RNA helicase dbp8 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp8 PE=3 SV=1 Length=545 Score = 287 bits (734), Expect = 8e-87, Method: Composition-based stats. Identities = 114/464 (25%), Positives = 171/464 (37%), Gaps = 71/464 (15%) Query 224 NQALFPACVLKNAELKFNFGEEEFKFPPKDG---FVALSKAPDGYIVKSQHSGNAQVTQT 280 Q F A +K L + G K P + K D SG Sbjct 114 AQTTFAALNVK-PWLVGSLGSMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 172 Query 281 KFL------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 L P AL++ P+RELA Q +QFK L+ +LI GG R Q + Sbjct 173 PILQKWAEDPFGIFALVLTPTRELALQIY---EQFKAISSPQSLKAVLITGGSDMRPQAT 229 Query 335 VLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQG-YSDFINRMHN 389 L IV+ TPGRL D + T + L +VR +VLDEAD LL+ G + + Sbjct 230 ALAQRPHIVIATPGRLADHIRTSGEDTIGALRRVRMVVLDEADRLLASGSVGSMLPDVEE 289 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + + K Q ++ +AT+ P LK P + V V+ Sbjct 290 CLSILPPPAK-RQTLLFTATVT--------------PEVRALKDMPRTPGKLPVFVCEVD 334 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + + L + H++ H + +++ Sbjct 335 TQALAIPPSLNQMHLQVPVTHREHYLHMFL--------------------LTEKNLPKSI 374 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +IFC D L LH +R NL RF+ R L Sbjct 375 VIFCNRTATADYLTHLLRLL---------DHRVTALHSKLPQRQRIDNLGRFRASAARIL 425 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TDVAARG+DI V VIN +P + +Y+HR+GR RA R G A+S V ++ Sbjct 426 VATDVAARGLDIPEVGLVINYDIPRDPDDYIHRVGRTARAGRKGEAVSFVGQRDVQLIQA 485 Query 630 VCSSRGKGCY---------NTRLKEDGGCTIWYNEMQLLSEIEE 664 + + G+ TR+ + + + + + EIEE Sbjct 486 IENRVGRQMEAWAEDGVNLETRVIRESLKLVGEKKREAMLEIEE 529 Score = 96.0 bits (237), Expect = 2e-19, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (43%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AF++P++ Sbjct 116 TTFAALNVKPWLVGSLGSMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPIL 175 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q E + + + Y++ A + Sbjct 176 QKWAE---------DPFGIFALVLTPTRELALQIYEQFKAISS 209 >sp|Q0CLX0|PRP28_ASPTN Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=prp28 PE=3 SV=1 Length=783 Score = 293 bits (750), Expect = 8e-87, Method: Composition-based stats. Identities = 97/384 (25%), Positives = 160/384 (42%), Gaps = 74/384 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q K K+ + I+GG + +Q L NG +I++ Sbjct 420 DGPYAIVLAPTRELAQQIEIEAK---KFTIPLGFTVVSIVGGHSLEEQAYSLRNGAEIII 476 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT--------- 395 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P Sbjct 477 ATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSDAAE 536 Query 396 --------------SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 D + Q ++ +AT+ + V++++ K + P V + DTV Sbjct 537 NAAAMSQLHHAGGGRDTRYRQTMMYTATMPTA-VERIARKYLRRPAIVTIGSAGEAVDTV 595 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 V L K R D+ + RP Sbjct 596 EQRV--------ELIAGEDKRKKRLGDILSSGEFRPP----------------------- 624 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 I+F K +CD + + Q G FS V LHG + +R+ L Sbjct 625 -------IIVFVNIKRNCDAIAREIKQWG---------FSSVTLHGSKTQEQREAALASV 668 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + G L+ TD+A RGID+ V V+N + ++Y HRIGR GRA + G+AI+ + Sbjct 669 RNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGN 728 Query 622 EKEKVWYHVCSSRGKGCYNTRLKE 645 E V Y + K + E Sbjct 729 EDADVMYDLKQMLIKSPISRVPDE 752 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 27/105 (26%), Positives = 48/105 (46%), Gaps = 1/105 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M +++E G+ + V + + PT IQ +IP+ + D++ A TGSGKT AF +P+ Sbjct 342 MRSWAESGLPSRLLDLVHRVGYKDPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPL 401 Query 61 IQIVYETLK-DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + E + D+ E +K + + F I Sbjct 402 LVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTI 446 >sp|Q54TJ4|DDX27_DICDI Probable ATP-dependent RNA helicase ddx27 OS=Dictyostelium discoideum OX=44689 GN=ddx27 PE=3 SV=1 Length=783 Score = 293 bits (750), Expect = 8e-87, Method: Composition-based stats. Identities = 116/479 (24%), Positives = 193/479 (40%), Gaps = 71/479 (15%) Query 226 ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP- 284 F L LK + F P A+ A +G + + S + T LP Sbjct 190 PTFEELHLSRPLLK-AVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPV 248 Query 285 -----------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 A + LI+ P+RELA Q + ++ ++ + LI+GG++ + Q Sbjct 249 LERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQF---SNITSCLIVGGLSNKAQE 305 Query 334 SVLENGVDIVVGTPGRLDD-LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 L D+V+ TPGRL D L++ + L + L+LDEAD LL G+ D IN++ P Sbjct 306 VELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCP 365 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 Q ++ SATL+ +VK L++ + P V + V T+ V + P+ Sbjct 366 T------NRQTMLFSATLND-EVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIKPQ- 417 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 S+ IL + IIF Sbjct 418 -------------------------------HLSDRPAILLSLCTRVFNQ----GGTIIF 442 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 CR+K + L F LHG+ +R +L++F+ G V +L+ + Sbjct 443 CRSKKEVHRLRIIFGL---------SDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLAS 493 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 DVA+RG+DI GV VIN +P+ NY+HR+GR RA G + S + K+ + Sbjct 494 DVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSCSFITDNDRKLLKDIV- 552 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSE-IEEHLNCTISQVEPDIKVPVDEFDGKVTY 690 ++ + +R W N ++ L+E I+ + + + + + K+ Sbjct 553 TKARNKAKSRSVSQDNVNFWRNRIEELTEDIKSIVREEMKEADLRKAEKTLDKAEKIIS 611 Score = 105 bits (263), Expect = 3e-22, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 52/111 (47%), Gaps = 6/111 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E+ + + +AV+++ + PT IQA++IPL L G D+L +A TGSGKT AF +PV Sbjct 189 LPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPV 248 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 ++ + + + + + A S+ C Sbjct 249 LERLLFRDSEYR------AIRVLILLPTRELALQCQSVMENLAQFSNITSC 293 >sp|A2QIL2|PRP28_ASPNC Pre-mRNA-splicing ATP-dependent RNA helicase prp28 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=prp28 PE=3 SV=1 Length=810 Score = 293 bits (751), Expect = 9e-87, Method: Composition-based stats. Identities = 91/381 (24%), Positives = 156/381 (41%), Gaps = 71/381 (19%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 + P A+++ P+RELA+Q K K+ + I+GG + +Q L +G +I++ Sbjct 449 DGPYAIVLAPTRELAQQIEIEAK---KFTGPLGFNVVSIVGGHSLEEQAYSLRDGAEIII 505 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG------ 398 TPGRL D + L LSQ ++++DEAD ++ G+ + +N++ + +P Sbjct 506 ATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEDAE 565 Query 399 --------------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + Q ++ +AT+ + V++++ K + P V + DTV Sbjct 566 NPLAMSRHINHDQHRYRQTMMYTATMPTA-VERIARKYLRRPAIVTIGSAGEAVDTVEQR 624 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + + R K Sbjct 625 VEMIAGEDKR--------------------------------------KKRLGDILSSGE 646 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 I+F K +CD + + Q G FS V LHG + +R+ L + G Sbjct 647 FRAPIIVFVNIKRNCDAIAREIKQWG---------FSSVTLHGSKTQDQREAALASVRNG 697 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ TD+A RGID+ V V+N + ++Y HRIGR GRA + G+AI+ + E Sbjct 698 TTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDA 757 Query 625 KVWYHVCSSRGKGCYNTRLKE 645 V Y + K + +E Sbjct 758 DVMYDLKQMLMKSPISRVPEE 778 Score = 111 bits (277), Expect = 6e-24, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M ++ E + + + + + + PT IQ +IP+ + D++ A TGSGKT AF +P+ Sbjct 371 MRSWDESNLPKRLMELINRVGYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPL 430 Query 61 IQIVYETLK-DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + E + D+ E +K + + F Sbjct 431 LCYIAELPRIDEFEWRKADGPYAIVLAPTRELAQQIEIEAKKFT 474 >sp|Q553B1|DDX46_DICDI ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum OX=44689 GN=helB1 PE=2 SV=1 Length=1151 Score = 300 bits (767), Expect = 9e-87, Method: Composition-based stats. Identities = 102/418 (24%), Positives = 170/418 (41%), Gaps = 67/418 (16%) Query 252 KDGFVALSKAPDGYIVKSQHSG-NAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQF 309 + +++ G + + Q K P ALI+ P+RELA Q K+F Sbjct 546 GRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKF 605 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV---STGKLNLSQVRF 366 K + LR + GG + +Q++ L+ G DIVV TPGR+ D++ + NL +V F Sbjct 606 SKVLG---LRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTF 662 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 LVLDEAD + G+ IN + + I Q I+ SAT V+ +++KI++ P Sbjct 663 LVLDEADRMFDMGFGPQINCIVDSI------RPDRQTIMFSATFPP-KVENVAKKILNKP 715 Query 427 TWVDLKGEDSVPDTVHHVVV--PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 + G V + V P + RL E L + + Sbjct 716 LEIIAGGRSIVSSDIEQFVEVRPTETRFRRLIELLSIWYHK------------------- 756 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 Q +IF + DNL + Q+ C+ Sbjct 757 ----------------------GQILIFTNRQETTDNLYRQL---------SNSQYQCLS 785 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG + +R + + FK LI T +A+RG+DI + V+N PD ++YVHR+G Sbjct 786 LHGSKDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVG 845 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 R GRA G A + + ++E+ + + + + + + + ++ Sbjct 846 RTGRAGNRGTAYTFITPDEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDV 903 Score = 104 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 4/104 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++++ G+ ++ +++ + PT IQA++IP I+ G D++ A TGSGKT AF +P+ Sbjct 508 IQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPM 567 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + K G+ I S + + + F+ Sbjct 568 FRHILAQPK----SAPGEGMIALIMSPTRELALQIHVECKKFSK 607 >sp|Q6CT49|PRP28_KLULA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=PRP28 PE=3 SV=1 Length=539 Score = 287 bits (733), Expect = 9e-87, Method: Composition-based stats. Identities = 97/377 (26%), Positives = 163/377 (43%), Gaps = 60/377 (16%) Query 253 DGFVALSKAPDGYIVKSQHSGNAQVTQTKFL-----PNAPKALIVEPSRELAEQTLNNIK 307 F+ ++ G + ++ L + P AL++ P+RELA+Q + + Sbjct 176 RDFIGVASTGSGKTLAFLLPILIKLHGIPPLNSITKHDGPLALVLAPTRELAQQIQHEGQ 235 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 K P + I+GG + + + L +G DI+V TPGRL D + + L L QV L Sbjct 236 SITKLWKRP-CNIVSIVGGHSLEEISANLRDGCDILVATPGRLLDCLDSHLLFLKQVNTL 294 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDEAD ++ G+ D + + + T Q ++ +AT S ++K++ + P+ Sbjct 295 VLDEADKMIDFGFEDQLTTILAK----TETISNRQTMMFTATF-SPTIEKVANGYLKKPS 349 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 +V + GE+S P + +V V + ++L Sbjct 350 YVTVGGEESKPK-IKQIVRYVPDEEEKL-------------------------------- 376 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + V+ + IIF K D L + +F LHG Sbjct 377 -------KILVKDFLPNYKAPIIIFINYKRTADWLFDKLREA---------RFRATTLHG 420 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 + +R+ +L + G V LI TDVA RGIDI V V+N+ P ++VHR+GR G Sbjct 421 SKSQEQREHSLSLLRNGKVDILIATDVAGRGIDIPNVSLVVNLQFPKSFDSFVHRVGRTG 480 Query 608 RAERMGLAISLVATEKE 624 RA + G A++ + E++ Sbjct 481 RAGKTGTALTFLTEEED 497 Score = 82.1 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 22/106 (21%), Positives = 44/106 (42%), Gaps = 3/106 (3%) Query 1 MAAFSEMGVMPEIAQAV--EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 + + E+ ++PE + ++ + PT IQ +IP ++ D + A TGSGKT AF + Sbjct 135 LRNWHELKLIPEDLLNIITNDLHYNEPTSIQRSTIPNVINNRDFIGVASTGSGKTLAFLL 194 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 P++ + + K + + + G + Sbjct 195 PILIKL-HGIPPLNSITKHDGPLALVLAPTRELAQQIQHEGQSITK 239 >sp|Q40466|IF413_TOBAC Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=355 Score = 280 bits (717), Expect = 9e-87, Method: Composition-based stats. Identities = 96/439 (22%), Positives = 169/439 (38%), Gaps = 99/439 (23%) Query 166 GFGGTGKKSHNKQFDNYGEEFT---MHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHM 222 G G + +Q+D E + Y ++ Sbjct 3 GLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDS--------------------- 41 Query 223 KNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ---- 276 F A L+ L+ + +G E+ + G V K D +++ SG + Sbjct 42 -----FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD--VIQQAQSGTGKTATF 94 Query 277 ----VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + Q + +AL++ P+RELA+Q ++ Y+ ++ +GG + R+ Sbjct 95 CSGVLQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLG---VKVHACVGGTSVRED 151 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 +L++GV +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P Sbjct 152 QRILQSGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP 211 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 ++QV V SAT+ + +++ K M+ P + +K +D + + V V+ + Sbjct 212 ------PKIQVGVFSATMPP-EALEITRKFMNQPVRILVKRDDVTLEGIKQFYVNVDKEE 264 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 +L E + + Q++IF Sbjct 265 WKL---------------------------------------ETLCDLYETLAITQSVIF 285 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 T+ D L + + HGD + R + F+ G R LI T Sbjct 286 VNTRRKVDWLTDKM---------RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 336 Query 573 DVAARGIDIHGVPYVINVT 591 D+ ARGID+ V VIN Sbjct 337 DLLARGIDVQQVSLVINYD 355 Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats. Identities = 20/70 (29%), Positives = 35/70 (50%), Gaps = 0/70 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F MG+ + + + + P+ IQ I G DV+ A++G+GKT F V+Q Sbjct 41 SFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQ 100 Query 63 IVYETLKDQQ 72 + +L + Q Sbjct 101 QLDYSLVECQ 110 >sp|Q5R7D1|DDX42_PONAB ATP-dependent RNA helicase DDX42 OS=Pongo abelii OX=9601 GN=DDX42 PE=2 SV=1 Length=942 Score = 296 bits (758), Expect = 1e-86, Method: Composition-based stats. Identities = 96/390 (25%), Positives = 156/390 (40%), Gaps = 59/390 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKS-QHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLN 304 + ++K G + Q + P + P A+IV P+REL +Q Sbjct 285 PVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHA 344 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 K+F K + LR + + GG + +Q L+ G +IVV TPGRL D V NL +V Sbjct 345 EGKRFGKAYN---LRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRV 401 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 +LV DEAD + G+ + + + + Q ++ SAT ++KL+ I+ Sbjct 402 SYLVFDEADRMFDMGFEYQVRSIASHV------RPDRQTLLFSATF-RKKIEKLARDILI 454 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 P V + V +V ++ + W L + Sbjct 455 DPIRVVQGDIGEANEDVTQIVEILHSGPSK-WNWLTR----------------------- 490 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 R ++ ++F K + + L Q+G + Sbjct 491 --------------RLVEFTSSGSVLLFVTKKANAEELANNLKQEG---------HNLGL 527 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHGD ER + + FKK D+ L+ TDVAARG+DI + VIN + + + HRIG Sbjct 528 LHGDMDQSERNKVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIG 587 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSR 634 R GRA G+A +L+ + + + Sbjct 588 RTGRAGEKGVAYTLLTPKDSNFAGDLVRNL 617 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 27/104 (26%), Positives = 49/104 (47%), Gaps = 4/104 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ G ++ + + ++ PT IQ + +P+ L G D++ A+TGSGKT AF P++ Sbjct 253 SSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPML 312 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + DQ+E + G I + + G F Sbjct 313 IHIM----DQKELEPGDGPIAVIVCPTRELCQQIHAEGKRFGKA 352 >sp|A3LSN3|DRS1_PICST ATP-dependent RNA helicase DRS1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DRS1 PE=3 SV=3 Length=741 Score = 292 bits (747), Expect = 1e-86, Method: Composition-based stats. Identities = 96/472 (20%), Positives = 185/472 (39%), Gaps = 64/472 (14%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + L L+ + + +++A + VA + G Sbjct 224 FQTLQLSRPVLKGLSQLGYTKPSPIQSASIPIAL--------LGRDIVAGAVTGSGKTAA 275 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ + + +++ P+RELA Q + K+ ++++N L L +GG+ Sbjct 276 YMIPIIERLLYKPSKVASTRVIVLTPTRELAIQVGDVGKKIGQFVNN--LNFGLAVGGLN 333 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 R Q L++ D+V+ TPGRL D + ++ ++ + LV+DEAD +L +G+ + + Sbjct 334 LRQQEQQLKSRPDVVIATPGRLIDHIRNSPSFSIDSLEVLVIDEADRMLDEGFQVELTEI 393 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + IP+ + Q ++ SAT+++ ++ L + + P + + + + V Sbjct 394 LSLIPKN-----KRQTLLFSATMNT-KIQDLIQLSLQRPVRIMIDPPKTAATKLTQEFVR 447 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + + L + ++ + + Sbjct 448 IRKRDHLKPALLFQ-----------------------------------LLKKLDPAQQS 472 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 + ++F K L G LHG +R N+ FKK V Sbjct 473 RIVVFVSRKESAHKLRIVLGLLG---------MKVSELHGSLTQEQRLNNVNDFKKLIVP 523 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 LICTD+AARG+DI + VIN +P + Y+HR+GR RA R G +IS V Sbjct 524 VLICTDLAARGLDIPKIEIVINYDMPKSHEVYLHRVGRTARAGRDGTSISFVGESTSD-- 581 Query 628 YHVCSSRGKGCYNTRLK-EDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIK 678 ++ K +K + I + +++ L++I E I +V + K Sbjct 582 RNIVKDAIKSLEGGEVKGKAVSRNIDWVDVEQLNKIVESKQEIIEEVLDEEK 633 Score = 101 bits (251), Expect = 8e-21, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 6/108 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + + + + ++ + P+ IQ+ SIP+ L G D++ A TGSGKT A+ IP+I Sbjct 222 TTFQTLQLSRPVLKGLSQLGYTKPSPIQSASIPIALLGRDIVAGAVTGSGKTAAYMIPII 281 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + K +T + + + D G + L Sbjct 282 ERLLYKPS------KVASTRVIVLTPTRELAIQVGDVGKKIGQFVNNL 323 >sp|Q0IHV9|DDX6_XENTR Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropicalis OX=8364 GN=ddx6 PE=2 SV=1 Length=481 Score = 284 bits (727), Expect = 1e-86, Method: Composition-based stats. Identities = 97/433 (22%), Positives = 170/433 (39%), Gaps = 66/433 (15%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 KDL + K C+ + + E P ++ + ++ + + ++ Sbjct 80 KDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA 139 Query 270 QHSGN-------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 ++ + + + +A+++ P+RELA Q Q K++ ++ + Sbjct 140 KNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGG--VKVMA 197 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG RD + L++ V +V+ TPGR+ DL+ G + ++ +VLDEAD LLSQ + Sbjct 198 TTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFVQ 257 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + +P K Q+++ SAT V+K + P ++L E+ V Sbjct 258 IMEDIIITLP------KNRQILLYSATFP-LSVQKFMTSHLQKPYEINLM-EELTLKGVT 309 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + K Sbjct 310 QYYAYVTERQ----------------------------------------KVHCLNTLFS 329 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +++Q+IIFC + + L + Q G +SC +H + R + F+ Sbjct 330 RLQINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFR 380 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R L+CTD+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Sbjct 381 NGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYD 440 Query 623 KEKVWYHVCSSRG 635 + G Sbjct 441 DRFNLKSIEEQLG 453 Score = 91.7 bits (226), Expect = 4e-18, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 97 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 156 Query 64 V 64 + Sbjct 157 L 157 >sp|Q5ZHZ0|DX39B_CHICK Spliceosome RNA helicase DDX39B OS=Gallus gallus OX=9031 GN=DDX39B PE=2 SV=1 Length=428 Score = 282 bits (722), Expect = 1e-86, Method: Composition-based stats. Identities = 105/491 (21%), Positives = 188/491 (38%), Gaps = 105/491 (21%) Query 190 DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKF 249 D G Y+ I S +D L E+ + + +++ + Sbjct 34 DVKGSYVSIH------SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIP---------- 77 Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 G L +A G K+ A + Q + + L++ +RELA Q ++F Sbjct 78 QAILGMDVLCQAKSGM-GKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERF 136 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 KY+ P ++ + GG+A + VL+ IVVGTPGR+ L LNL ++ + Sbjct 137 SKYM--PSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFI 194 Query 369 LDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 LDE D +L + R +I ++T K QV++ SATL S +++ + K M P Sbjct 195 LDECDKMLE---QLDMRRDVQEIFRMTPHEK--QVMMFSATL-SKEIRPVCRKFMQDPME 248 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 + + E + L + +++ D Sbjct 249 IFVDDETKL-----------------TLHGLQQYYVKLKDNE------------------ 273 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K + + +Q +IF ++ C L Q ++Q F + +H Sbjct 274 ----KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ---------NFPAIAIHRG 320 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ER ++FK R L+ T++ RG+DI V N +P++ Y+HR+ R GR Sbjct 321 MPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGR 380 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 GLAI+ V+ E N+ ++L+++++ Sbjct 381 FGTKGLAITFVSDE-------------------------------NDAKILNDVQDRFEV 409 Query 669 TISQVEPDIKV 679 IS++ +I + Sbjct 410 NISELPDEIDI 420 Score = 77.9 bits (190), Expect = 8e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104 Query 62 QIV 64 Q + Sbjct 105 QQL 107 >sp|Q8VDW0|DX39A_MOUSE ATP-dependent RNA helicase DDX39A OS=Mus musculus OX=10090 GN=Ddx39a PE=1 SV=1 Length=427 Score = 282 bits (722), Expect = 1e-86, Method: Composition-based stats. Identities = 102/446 (23%), Positives = 176/446 (39%), Gaps = 74/446 (17%) Query 190 DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKF 249 D G Y+ I S +D L E+ + + +++ + Sbjct 33 DVKGSYVSIH------SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIP---------- 76 Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 G L +A G K+ A + Q + + L++ +RELA Q ++F Sbjct 77 QAILGMDVLCQAKSGM-GKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERF 135 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 KY+ P ++ + GG++ + VL+ +VVGTPGR+ LV + LNL V+ V Sbjct 136 SKYM--PSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFV 193 Query 369 LDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 LDE D +L + R +I ++T K Q ++ SATL S +++ + K M P Sbjct 194 LDECDKMLE---QLDMRRDVQEIFRLTPHEK--QCMMFSATL-SKEIRPVCRKFMQDPME 247 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 V + E + L + +++ D Sbjct 248 VFVDDETKL-----------------TLHGLQQYYVKLKDSE------------------ 272 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K + + +Q +IF ++ C L Q ++Q F + +H Sbjct 273 ----KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQ---------NFPAIAIHRG 319 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ER ++FK R L+ T++ RG+DI V V N +P++ Y+HR+ R GR Sbjct 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379 Query 609 AERMGLAISLVATEKEKVWYHVCSSR 634 GLA++ V+ E + + R Sbjct 380 FGTKGLAVTFVSDENDAKILNDVQDR 405 Score = 78.2 bits (191), Expect = 6e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 44 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 103 Query 62 QIV 64 Q + Sbjct 104 QQI 106 >sp|Q6BLU9|PRP28_DEBHA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=PRP28 PE=3 SV=2 Length=580 Score = 287 bits (735), Expect = 1e-86, Method: Composition-based stats. Identities = 91/356 (26%), Positives = 153/356 (43%), Gaps = 49/356 (14%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N P LI+ P+RELA Q K F D L + IIGG + + + NGV IVV Sbjct 236 NKPLGLILAPTRELALQITKEAKLFG---DKLNLNVVTIIGGHQYEETVHSVRNGVHIVV 292 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS-------- 396 TPGRL D + G +NLS F +DEAD ++ G+ + + N +P Sbjct 293 ATPGRLIDSLERGIINLSNCYFFTMDEADKMIDMGFEKSLQSILNYLPASEKLETTIDGK 352 Query 397 --DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 + K+ ++ +AT+ S ++K+++ + P ++ + D ++ Sbjct 353 IFNIKKRITLMFTATI-SPPIEKITKNYLMKPGYLFIGNVGEAVDNINQQF--------- 402 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 + + P+ + IL+ E++ IIF Sbjct 403 -------------EYFGARQSSDEILDPKKLDKLFSILRFHK-----DENRNYSIIIFAN 444 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 K C+ L ++G + +HG + R++ ++ F++G + LI TDV Sbjct 445 FKKACEELAYELSRKGFSDN--------TVIHGSKSQEARERAIDSFREGKDKILIATDV 496 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 AARGIDI V V+N + + Y+HRIGR GRA G + + + +V+ + Sbjct 497 AARGIDIPNVSLVVNYQMTKKFDEYIHRIGRTGRAGNKGTSCTFIDDGDSEVFLDL 552 Score = 99.4 bits (246), Expect = 2e-20, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 53/133 (40%), Gaps = 10/133 (8%) Query 1 MAAFSEMGVMPEIAQ-AVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + ++E + ++ ++ + + PT IQ SIPL L G D++ AETGSGKT AF +P Sbjct 153 LRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLP 212 Query 60 VIQIVYE-----TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDR----GSAFAIGSDGLC 110 + + L + Q+ + + + + G + + Sbjct 213 LFSYILSVDSNYLLYEHQQESNFNKPLGLILAPTRELALQITKEAKLFGDKLNLNVVTII 272 Query 111 CQSREVKEWHGCR 123 + + H R Sbjct 273 GGHQYEETVHSVR 285 >sp|Q1DZK8|DBP3_COCIM ATP-dependent RNA helicase DBP3 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP3 PE=3 SV=2 Length=515 Score = 285 bits (729), Expect = 2e-86, Method: Composition-based stats. Identities = 109/425 (26%), Positives = 171/425 (40%), Gaps = 63/425 (15%) Query 216 FEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNA 275 F P N P + + +++ G + Sbjct 102 FSFLPESSNDLYLPLEKFSSPTPIQAVSW--PLAFAGRDLIGVAETGSGKTLAFGLPCLR 159 Query 276 QVTQTKFLPNA--PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 +V + + P ALI+ P+RELA Q + + +F +D + I GG Q Sbjct 160 RVLELNNSETSCKPCALIITPTRELAVQIYDQLLRFSSAVD---VGIACIYGGSPKDHQR 216 Query 334 SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 + N +V+ TPGRL D + +NLS V++LVLDEAD +L +G+ I + IP Sbjct 217 REIRN-ASVVIATPGRLKDFQADQTINLSGVKYLVLDEADRMLDKGFEQDIQDIVKGIPS 275 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG--EDSVPDTVHHVVVPVNP- 450 ++ Q I+ +AT V+ L+ P V + + + +V + P Sbjct 276 T----QKRQTIMFTATWP-IGVRNLAASFTKNPVTVTIGDSSDIRANKRIKQMVEVLQPY 330 Query 451 -KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 K RL E L + + H + Sbjct 331 EKDSRLLELLRRYQDGGKNNH-------------------------------------RI 353 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 ++FC K + +E++ +G F +HGD ER ++LE FK G + L Sbjct 354 LVFCLYKKEAMRVERFIGSKG---------FKVAGIHGDMSQTERFRSLEAFKSGSISLL 404 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TDVAARG+DI V V+NVT P ++YVHRIGR GRA GLAI+L + + Sbjct 405 VATDVAARGLDIPAVKLVLNVTFPLTIEDYVHRIGRTGRAGAEGLAITLFTERDKALSGP 464 Query 630 VCSSR 634 + + Sbjct 465 LINVL 469 Score = 101 bits (251), Expect = 4e-21, Method: Composition-based stats. Identities = 42/142 (30%), Positives = 62/142 (44%), Gaps = 15/142 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +FS + + + PT IQA S PL G D++ AETGSGKT AF +P Sbjct 99 ITSFSFLPESSNDLY-LPLEKFSSPTPIQAVSWPLAFAGRDLIGVAETGSGKTLAFGLPC 157 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC-------- 111 ++ V E L + + K I T + + YD+ F+ D G+ C Sbjct 158 LRRVLE-LNNSETSCKPCALIIT---PTRELAVQIYDQLLRFSSAVDVGIACIYGGSPKD 213 Query 112 -QSREVKEWHGCRATKGLMKGK 132 Q RE++ AT G +K Sbjct 214 HQRREIRNASVVIATPGRLKDF 235 >sp|P54824|DDX6_XENLA ATP-dependent RNA helicase ddx6 OS=Xenopus laevis OX=8355 GN=ddx6 PE=1 SV=2 Length=481 Score = 284 bits (726), Expect = 2e-86, Method: Composition-based stats. Identities = 97/433 (22%), Positives = 169/433 (39%), Gaps = 66/433 (15%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 KDL + K C+ + + E P ++ + ++ + + ++ Sbjct 80 KDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA 139 Query 270 QHSGN-------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 ++ + + + +A+++ P+RELA Q Q K++ + + Sbjct 140 KNGTGKSGAYLIPLLERLDLKKDCIQAMVIVPTRELALQVSQICIQVSKHMGGA--KVMA 197 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG RD + L++ V +V+ TPGR+ DL+ G + ++ +VLDEAD LLSQ + Sbjct 198 TTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFMQ 257 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + +P K Q+++ SAT V+K + P ++L E+ V Sbjct 258 IMEDIIMTLP------KNRQILLYSATFP-LSVQKFMTLHLQKPYEINLM-EELTLKGVT 309 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + K Sbjct 310 QYYAYVTERQ----------------------------------------KVHCLNTLFS 329 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +++Q+IIFC + + L + Q G +SC +H + R + F+ Sbjct 330 RLQINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFR 380 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R L+CTD+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Sbjct 381 NGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYD 440 Query 623 KEKVWYHVCSSRG 635 + G Sbjct 441 DRFNLKSIEEQLG 453 Score = 91.7 bits (226), Expect = 4e-18, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 39/61 (64%), Gaps = 0/61 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 97 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 156 Query 64 V 64 + Sbjct 157 L 157 >sp|Q5U216|DX39A_RAT ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1 Length=427 Score = 282 bits (721), Expect = 2e-86, Method: Composition-based stats. Identities = 102/446 (23%), Positives = 176/446 (39%), Gaps = 74/446 (17%) Query 190 DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKF 249 D G Y+ I S +D L E+ + + +++ + Sbjct 33 DVKGSYVSIH------SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIP---------- 76 Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 G L +A G K+ A + Q + + L++ +RELA Q ++F Sbjct 77 QAILGMDVLCQAKSGM-GKTAVFVLATLQQIEPINGQVSVLVMCHTRELAFQISKEYERF 135 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 KY+ P ++ + GG++ + VL+ +VVGTPGR+ LV + LNL V+ V Sbjct 136 SKYM--PSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFV 193 Query 369 LDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 LDE D +L + R +I ++T K Q ++ SATL S +++ + K M P Sbjct 194 LDECDKMLE---QLDMRRDVQEIFRLTPHEK--QCMMFSATL-SKEIRPVCRKFMQDPME 247 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 V + E + L + +++ D Sbjct 248 VFVDDETKL-----------------TLHGLQQYYVKLKDSE------------------ 272 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K + + +Q +IF ++ C L Q ++Q F + +H Sbjct 273 ----KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQ---------NFPAIAIHRG 319 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ER ++FK R L+ T++ RG+DI V V N +P++ Y+HR+ R GR Sbjct 320 MAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR 379 Query 609 AERMGLAISLVATEKEKVWYHVCSSR 634 GLA++ V+ E + + R Sbjct 380 FGTKGLAVTFVSDENDAKILNDVQDR 405 Score = 78.2 bits (191), Expect = 6e-14, Method: Composition-based stats. Identities = 20/63 (32%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PE+ +A+ + + P+++Q E IP + G DVL A++G GKT F + + Sbjct 44 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 103 Query 62 QIV 64 Q + Sbjct 104 QQI 106 >sp|Q5ASK8|SUB2_EMENI ATP-dependent RNA helicase sub2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=sub2 PE=3 SV=2 Length=434 Score = 282 bits (721), Expect = 2e-86, Method: Composition-based stats. Identities = 99/382 (26%), Positives = 158/382 (41%), Gaps = 71/382 (19%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 L +A G + K+ + Q + +P L++ +RELA Q N +F KY+ Sbjct 98 DVLCQAKSG-LGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYL-- 154 Query 316 PKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 P ++ + GG + + VL N +I+VGTPGRL+ LV KL+L V+ VLDE Sbjct 155 PDVKTAVFYGGTPIQKDIEVLSNKDTFPNIIVGTPGRLNALVRDKKLSLRNVKAFVLDEC 214 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L + R +I + T K QV++ SATL S DV+ + +K M P V + Sbjct 215 DKMLD---QIDMRRDVQEIFRATPTDK--QVMMFSATL-SQDVRPICKKFMRNPLEVYVD 268 Query 433 GEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + + ++ Sbjct 269 DDTKLTLHGLQQYYIKLSEAE--------------------------------------- 289 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + +Q IIF ++ I + L++ + F + +H R Sbjct 290 -KNRKLNELLDSLEFNQVIIFVKSTIRANELDKLLRE---------CNFPSIAVHSGR-- 337 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 + FK+ + R + TDV RGIDI + IN LP + +Y+HR+GR GR Sbjct 338 ------YKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGT 391 Query 612 MGLAISLV-ATEKEKVWYHVCS 632 GL+IS V E E+V + Sbjct 392 KGLSISFVSTPEDEQVLKDIEK 413 Score = 71.7 bits (174), Expect = 9e-12, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 32/63 (51%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + E+ +A+ + + P+++Q IP + DVL A++G GKT F + + Sbjct 59 TGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTL 118 Query 62 QIV 64 + Sbjct 119 HQL 121 >sp|A3LZT3|DBP10_PICST ATP-dependent RNA helicase DBP10 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP10 PE=3 SV=2 Length=931 Score = 295 bits (755), Expect = 3e-86, Method: Composition-based stats. Identities = 112/479 (23%), Positives = 188/479 (39%), Gaps = 44/479 (9%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + GL+ + ++ + ++ + + V +++ G Sbjct 101 FQSFGLSKLVLTNIAKKGYRQPTPIQRKTIPLIMANRD--------VVGMARTGSGKTAA 152 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ + +A+I+ PSRELA QT +K+F K LR +++ GG + Sbjct 153 FTLPVIEKL-KGHSARVGIRAIILSPSRELALQTYKQVKEFSK---GSDLRAIVLTGGDS 208 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 DQ S + + DIV+ TPGR L +L+L V ++V DEAD L QG+++ +N + Sbjct 209 LEDQFSSMVSNPDIVIATPGRFLHLQVEMQLDLKTVEYIVFDEADHLFEQGFAEQLNELL 268 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV--V 446 +P + Q ++ SATL V ++ + P V L + + D + Sbjct 269 AVLP------PQRQSLLFSATLPRSLV-DFAKAGLSNPVLVRLDADSKISDQLQMAFFTT 321 Query 447 PVNPKTDRLWERLGK------------SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 N + L L + +R D D E S+ K Sbjct 322 KKNEREANLLYVLQEVIKMPLGTAEQIKKLRLMDKRVNDEAEEEELENESGSKRKYKFKK 381 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 E A I+F TK + + G + ++G H R Sbjct 382 ERLPSANVLPSPHSTIVFVPTKHHVEYITTLLRDAG---------YLVSYIYGTLDQHAR 432 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 K L +F+ G L+ TDVAARGIDI + V+N TLP + ++HR+GR RA G Sbjct 433 KNQLYQFRLGMTTVLVVTDVAARGIDIPVLANVVNYTLPGSSKIFIHRVGRTARAGNKGW 492 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 A S+V ++ + GK T ++E + Q + +E + T V Sbjct 493 AYSIVNEKELPYLLDLELFLGKKILLTAMQEQK--CQLLKDKQGDNYVEPKVQYTDRLV 549 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 51/105 (49%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F G+ + + + + PT IQ ++IPLI+ DV+ A TGSGKT AF++PVI+ Sbjct 100 SFQSFGLSKLVLTNIAKKGYRQPTPIQRKTIPLIMANRDVVGMARTGSGKTAAFTLPVIE 159 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + G I S + + Y + F+ GSD Sbjct 160 KLKGHS-----ARVGIRAI--ILSPSRELALQTYKQVKEFSKGSD 197 >sp|Q4JG17|VASAL_PENVA Probable ATP-dependent RNA helicase vasa-like OS=Penaeus vannamei OX=6689 GN=vasa PE=2 SV=2 Length=703 Score = 290 bits (741), Expect = 3e-86, Method: Composition-based stats. Identities = 114/528 (22%), Positives = 191/528 (36%), Gaps = 107/528 (20%) Query 137 VSCHDQGLCRVGWSTMQASLDLGTDK--FGFGFGGTGKKSHNKQFD------NYGEEFTM 188 C ++G + G +K F G G + + + Sbjct 167 FKCGEEGHM-----SRDCPSGGGRNKGCFKCGQEGHNARDCPNPGEGSEEKKPRAPLYIP 221 Query 189 HDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQAL-----------FPACVLKNAE 237 D ++ + G + G F+ ++ F + L+ Sbjct 222 ADV-------NEDELF--VMGIEAGSNFDAYANVPANVSGAEPIQPAAESFQSMNLRPLL 272 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIV---KSQHSGNAQVTQTKFL----------- 283 L+ N + + P + +G + SG L Sbjct 273 LE-NIVKAGYGCPTPVQKYTIPNVMNGRDIMACAQTGSGKTAAFLLPMLHYILDNNCPSN 331 Query 284 ----PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 P P L++ P+RELA Q + ++F + + + GG A QL + +G Sbjct 332 AFEEPAQPTGLVICPTRELAIQIMREARKFSH---SSVAKCCVAYGGAAGFHQLKTIHSG 388 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 I+V TPGRL D + GK+ S +++LVLDEAD +L G+ I + N + + Sbjct 389 CHILVATPGRLLDFLEKGKIVFSSLKYLVLDEADRMLDMGFLSSIKTVINH--KTMTPTA 446 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV--VPVNPKTDRLWE 457 ++ SAT ++++L+ ++ +V + + V V VP K +L E Sbjct 447 ERITLMFSATFP-HEIQELASAFLNNYLFVVVGTVGAANTDVKQEVLCVPKFEKKAKLVE 505 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 + I DD ++ ++F K Sbjct 506 MCEEILISADD--------------------------------------EKILVFVEQKR 527 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 D + Y ++ +F +HGDR +R+Q L F+ G L+ T V AR Sbjct 528 VADFVGTYLCEK---------KFRATTMHGDRYQAQREQALSEFRTGVHNILVATAVTAR 578 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 G+DI G+ V+N LP + YVHRIGR GR GL+IS E + Sbjct 579 GLDIKGIGVVVNYDLPKDIDEYVHRIGRTGRLGNRGLSISFYDDETDA 626 Score = 117 bits (293), Expect = 5e-26, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 0/109 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F M + P + + + + + PT +Q +IP ++ G D++ A+TGSGKT AF +P++ Sbjct 262 SFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMACAQTGSGKTAAFLLPMLH 321 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + + ++ + + F+ S CC Sbjct 322 YILDNNCPSNAFEEPAQPTGLVICPTRELAIQIMREARKFSHSSVAKCC 370 >sp|Q759L6|SUB2_EREGS ATP-dependent RNA helicase SUB2 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SUB2 PE=3 SV=1 Length=438 Score = 282 bits (721), Expect = 3e-86, Method: Composition-based stats. Identities = 96/409 (23%), Positives = 164/409 (40%), Gaps = 62/409 (15%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 G L +A G + K+ + + Q +P +++ +RELA Q N +F Sbjct 87 QSIHGTDVLCQAKSG-LGKTAVFVLSTLQQLDPVPGEVSVVVLCNARELAYQIRNEYLRF 145 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRF 366 KY+ P ++ + GG R + +L+N IVV TPGRL LV ++LS V+ Sbjct 146 SKYM--PDVKTAVFYGGTDTRKDIELLKNKDTAPHIVVATPGRLKALVRDNNIDLSHVKN 203 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 V+DE D +L + R I + T K QV++ SATL S +++ + + + P Sbjct 204 FVIDECDKVLE---ELDMRRDVQDIFRATPRDK--QVMMFSATL-SQEIRPICRRFLQNP 257 Query 427 TWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + + E + + + + Sbjct 258 LEIFVDDEAKLTLHGLQQYYIRLEERE--------------------------------- 284 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 K + + + + +Q IIF ++ + + L + F + + Sbjct 285 -------KNRKLAQLLDDLEFNQVIIFVKSTLRANELTKLL---------NASNFPAITV 328 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG + ER + FK+ + R + TDV RGIDI + IN +P E Y+HR+GR Sbjct 329 HGHMRQEERIARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYDMPSEADQYLHRVGR 388 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 GR GLAISLV+++ ++ R +E + + N Sbjct 389 AGRFGTKGLAISLVSSKDDEEVLAKIQERFDVKITEFPEEGVDPSTYLN 437 Score = 75.6 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + + Sbjct 54 TGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTL 113 Query 62 QIV 64 Q + Sbjct 114 QQL 116 >sp|A5E0U9|DBP8_LODEL ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP8 PE=3 SV=1 Length=444 Score = 282 bits (721), Expect = 3e-86, Method: Composition-based stats. Identities = 102/478 (21%), Positives = 181/478 (38%), Gaps = 63/478 (13%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 K+LG+A + ++ + +++A + + + +K G + Sbjct 5 FKELGVAKWLSESLEAMKIHSPTSIQSACIP--------EILKGRDCIGGAKTGSGKTIA 56 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 +TQ P LI+ P+RELA Q +QF ++ +++GG Sbjct 57 FAAL---MLTQWSQDPFGIFGLILTPTRELALQI---AEQFAALGALMNIKVCVVVGGED 110 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLV----STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 Q L+ V+ TPGRL D + L ++++LVLDEAD LLS + + Sbjct 111 FVKQTLELQKKPHFVIATPGRLADHILNSGEETVSGLRRIKYLVLDEADRLLSNSFGSDL 170 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 R +P ++ Q ++ +AT+ VK L +K + E +P +H Sbjct 171 QRCFTILP----PSEKRQTLLFTATVTDA-VKALKDKP---------RAEGKLPVFLHQ- 215 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + + L ++ + P ++ Sbjct 216 -VDAGVDQIAIPKTLSTMYVFVPSYVKEAYLTSILKLP--------------------KY 254 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + A++F + + L + + +F LH + ER +L RFK G Sbjct 255 EESTAVVFVNRTMTAEVLRRMLRKL---------EFKVASLHSEMPQTERTNSLHRFKAG 305 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDVA+RG+DI V V+N +P + +++HR+GR RA R G AIS++ + Sbjct 306 AARILIATDVASRGLDIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDAISIIGEKDI 365 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 + + K +D + ++ E L+ KV Sbjct 366 ERIESIEERINKKMELLEGVDDDKVINDSLQKATTAKREAMLDMDKESFGERRKVNKK 423 Score = 95.2 bits (235), Expect = 2e-19, Method: Composition-based stats. Identities = 37/156 (24%), Positives = 64/156 (41%), Gaps = 20/156 (13%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+GV +++++E M PT IQ+ IP IL G D + A+TGSGKT AF+ ++ Sbjct 4 SFKELGVAKWLSESLEAMKIHSPTSIQSACIPEILKGRDCIGGAKTGSGKTIAFAALMLT 63 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLCCQ 112 + + + + ++ +A +G + Q Sbjct 64 QWSQ---------DPFGIFGLILTPTRELALQIAEQFAALGALMNIKVCVVVGGEDFVKQ 114 Query 113 SREV-KEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 + E+ K+ H AT G + GL R+ Sbjct 115 TLELQKKPHFVIATPGRLADHILNSGEETVSGLRRI 150 >sp|A5DU73|PRP28_LODEL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=PRP28 PE=3 SV=1 Length=597 Score = 287 bits (733), Expect = 4e-86, Method: Composition-based stats. Identities = 102/454 (22%), Positives = 184/454 (41%), Gaps = 76/454 (17%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +++ + GL +I +K+ ++ A + + V +++ G Sbjct 184 TRSWDESGLDPKILASLKSFGFRQPTPVQRASIPISL--------ELRDVVGVAETGSGK 235 Query 266 IVKSQHSGNAQVTQT-------KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 + +++ + + N P AL++ P+RELA Q ++F K Sbjct 236 TLAFLLPLLHYLSRVDGNYLNYEKVRNEPLALVLAPTRELALQITQEAEKFGK---QLGF 292 Query 319 RELLIIGGVAARDQLSVLEN-----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 L IIGG ++ + ++N GV IVVGTPGRL D V LN S+ +LV+DEAD Sbjct 293 NVLSIIGGRQYQETMDQIDNMIVGRGVHIVVGTPGRLLDSVERKILNFSKCYYLVMDEAD 352 Query 374 GLLSQGYSDFINRMHNQIPQVTS----------DGKRLQVIVCSATLHSFDVKKLSEKIM 423 ++ G+ +N++ N +P+ + ++ +AT+ S ++K+++ + Sbjct 353 RMIDMGFEKDLNKLINLLPKNEKLSTTIDGKLFHLTKRLTMMYTATI-SPPIEKITKSYL 411 Query 424 HFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 P ++ + G D + + Sbjct 412 IDPAYIYIGGAGEALDNIDQHF----------------------------DYLSTYAESA 443 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 S+ IK+++G + ++ IIF K CD L Q + V Sbjct 444 RLSKLIKVVQGHK-----RRNRNALVIIFANFKHVCDVLSLELEQ---------NNLLNV 489 Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +HG + R++ LE F+ L+ TDVAARGID+ V VIN + + Y+HRI Sbjct 490 VIHGSKSQEAREEALEDFRTHQAPILVATDVAARGIDVPNVSLVINYQMSKKFDEYIHRI 549 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GR GRA +G + + + + + + G Sbjct 550 GRTGRAGNLGESYTFLDDADAETFMPLKKFLKSG 583 Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++ E G+ P+I +++ + PT +Q SIP+ L DV+ AETGSGKT AF +P++ Sbjct 185 RSWDESGLDPKILASLKSFGFRQPTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLL 244 Query 62 QIVYETLKD-QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + K + + + + F Sbjct 245 HYLSRVDGNYLNYEKVRNEPLALVLAPTRELALQITQEAEKFGK 288 >sp|P54823|DDX6_MOUSE Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus OX=10090 GN=Ddx6 PE=1 SV=1 Length=483 Score = 283 bits (724), Expect = 4e-86, Method: Composition-based stats. Identities = 98/433 (23%), Positives = 169/433 (39%), Gaps = 66/433 (15%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 KDL + K C+ + + E P ++ + ++ + + ++ Sbjct 81 KDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA 140 Query 270 QHSGN-------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 ++ + + + +A+++ P+RELA Q Q K++ + + Sbjct 141 KNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGA--KVMA 198 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG RD + L++ V +V+ TPGR+ DL+ G + V+ +VLDEAD LLSQ + Sbjct 199 TTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQ 258 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + +P K Q+++ SAT V+K + P ++L E+ V Sbjct 259 IMEDIILTLP------KNRQILLYSATFP-LSVQKFMNSHLQKPYEINLM-EELTLKGVT 310 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + K Sbjct 311 QYYAYVTERQ----------------------------------------KVHCLNTLFS 330 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +++Q+IIFC + + L + Q G +SC +H + R + F+ Sbjct 331 RLQINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFR 381 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R L+CTD+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Sbjct 382 NGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYD 441 Query 623 KEKVWYHVCSSRG 635 + G Sbjct 442 DRFNLKSIEEQLG 454 Score = 93.3 bits (230), Expect = 1e-18, Method: Composition-based stats. Identities = 33/128 (26%), Positives = 57/128 (45%), Gaps = 3/128 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW---H 120 + + Q T Q++ + G+ + G + ++ H Sbjct 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217 Query 121 GCRATKGL 128 AT G Sbjct 218 VVIATPGR 225 >sp|Q6FQQ6|IF4A_CANGA ATP-dependent RNA helicase eIF4A OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=TIF1 PE=3 SV=1 Length=396 Score = 280 bits (716), Expect = 5e-86, Method: Composition-based stats. Identities = 106/426 (25%), Positives = 178/426 (42%), Gaps = 72/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F L L+ F +G + + + + + D +G A + + Sbjct 25 FDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQR 84 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 AP+AL++ P+RELA Q + ++D ++ IGG + + L + Sbjct 85 IDPAIKAPQALMLAPTRELALQIQKVVMALGFHMD---IKVHACIGGTSFVEDAEGLRD- 140 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVVGTPGR+ D + K + ++ +LDEAD +LS G+ + I ++ +P T Sbjct 141 AQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEMLSTGFKEQIYQIFTMLPPTT---- 196 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ DV +++ K M P + +K ++ + + V V + Sbjct 197 --QVVLLSATMP-RDVLEVTAKFMQNPVRILVKKDELTLEGIKQFYVNVEEEQ------- 246 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 K + + QA+IFC T+ Sbjct 247 --------------------------------FKYDCLTDLYDSISVTQAVIFCNTRRKV 274 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L Q F+ ++ D ER ++ F+ G R LI TD+ ARGI Sbjct 275 EELTQRLT---------ADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGI 325 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP K+NY+HRIGR GR R G+AI+ + E + + + Y Sbjct 326 DVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVNEDVQALREL-----EQFY 380 Query 640 NTRLKE 645 +T+++E Sbjct 381 STQIEE 386 Score = 90.2 bits (222), Expect = 7e-18, Method: Composition-based stats. Identities = 30/126 (24%), Positives = 51/126 (40%), Gaps = 1/126 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + ++ + V + P+ IQ +I I+ G DVL A++G+GKTG FSI +Q Sbjct 25 FDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQR 84 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREVKEWHGC 122 + +K Q T + + A IG + +++ Sbjct 85 IDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLRDAQIV 144 Query 123 RATKGL 128 T G Sbjct 145 VGTPGR 150 >sp|Q59PR3|DBP8_CANAL ATP-dependent RNA helicase DBP8 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP8 PE=3 SV=1 Length=440 Score = 282 bits (720), Expect = 5e-86, Method: Composition-based stats. Identities = 112/500 (22%), Positives = 184/500 (37%), Gaps = 95/500 (19%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DLG+A + + ++ +++A + G + A G K Sbjct 3 FNDLGVAKWLSESLDAMKIYTPTAIQSACIPAIL----------KGHDCIGGAKTG-SGK 51 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + +TQ P LI+ P+RELA Q +QF N ++ +++GG Sbjct 52 TIAFAAPMLTQWSEDPFGIFGLILTPTRELALQI---AEQFAALGANMNIKVAVVVGGED 108 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLV----STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 Q L+ V+ TPGRL D + L +V++LVLDEAD LLS + + Sbjct 109 FVQQTLALQRKPHFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDL 168 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK---------IMHFPTWVDLKGED 435 R + +P + Q ++ +AT+ V+ L EK MH V+ + Sbjct 169 QRCFDVLP----TSDKRQTLLFTATITDA-VRALKEKPPTPGKPPVFMH---EVETVDKV 220 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 ++P T+ V V + Sbjct 221 AIPSTLQISYVFVPSYVKEAY--------------------------------------L 242 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 ++ +++ K A+IF + L + + F LH + ER Sbjct 243 NSILHLEQFKDSTAVIFVNRTTTAEVLRRMLRKL---------DFRVASLHSEMPQSERT 293 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 +L RFK G R LI TDVA+RG+DI V VIN +P + +++HR+GR RA R G A Sbjct 294 NSLHRFKAGAARILIATDVASRGLDIPTVELVINFDIPADPDDFIHRVGRTARAGRKGDA 353 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 +S++ + + K D I+E L+ T Sbjct 354 VSIIGEKDIDRIQSIEERINKKMELLEDVNDDNV------------IKESLSATSVAKRE 401 Query 676 DIKVPVDE-FDGKVTYGQKR 694 + E F + +K+ Sbjct 402 SLMEMDKENFGERKKINRKK 421 Score = 97.9 bits (242), Expect = 3e-20, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 62/156 (40%), Gaps = 20/156 (13%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+++GV ++++++ M PT IQ+ IP IL G D + A+TGSGKT AF+ P++ Sbjct 2 SFNDLGVAKWLSESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLT 61 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG----------SDGLCCQ 112 E + + + ++ +A + Q Sbjct 62 QWSE---------DPFGIFGLILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQ 112 Query 113 SREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRV 147 + ++ H AT G + GL RV Sbjct 113 TLALQRKPHFVIATPGRLADHILNSGEETISGLRRV 148 >sp|Q91372|DDX4_XENLA Probable ATP-dependent RNA helicase DDX4 OS=Xenopus laevis OX=8355 GN=ddx4 PE=2 SV=1 Length=700 Score = 289 bits (739), Expect = 5e-86, Method: Composition-based stats. Identities = 99/389 (25%), Positives = 170/389 (44%), Gaps = 60/389 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSG-----NAQVTQTKFLP-NAPKALIVEPSRELAE 300 +A ++ G N +T +++L P+A+I+ P+REL Sbjct 306 PIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEGITASQYLQLQEPEAIIIAPTRELIN 365 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q + ++F +R +++ GG+ + +E G +I+ TPGRL D+VS K+ Sbjct 366 QIYLDARKFS---YGTCVRPVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEKIG 422 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 LS++R+LVLDEAD +L G++ I ++ + ++ Q ++ SAT ++++L+ Sbjct 423 LSKLRYLVLDEADRMLDMGFAPEIEKLMTK--PGMPTKEKRQTLMFSATYP-EEIRRLAS 479 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 + H+ V V ++ Sbjct 480 NYLKS----------------EHLFVVVG-----------------------LVGGACSD 500 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 + E + K E + +K + ++ +IF TK D + Y Q+ +F Sbjct 501 VAQTVLEMRENGKMEKLLEILKSSEKERTMIFVNTKKKADFIAGYLCQE---------KF 551 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 S +HGDR+ ++R+ L F+ G ++CT VAARG+DI V +VIN +P E YV Sbjct 552 SSTSIHGDREQYQRESALWDFRTGKCTVIVCTAVAARGLDIENVQHVINYDVPKEVDEYV 611 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYH 629 HRIGR GR G A S + + V Sbjct 612 HRIGRTGRCGNTGKATSFFNVQDDHVIAR 640 Score = 102 bits (253), Expect = 4e-21, Method: Composition-based stats. Identities = 24/106 (23%), Positives = 47/106 (44%), Gaps = 0/106 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + + + V ++ T +Q SIP+I+ G D++ A+TGSGKT AF +P+ Sbjct 273 ILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPI 332 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + + + + + + Y F+ G+ Sbjct 333 LSYMMNEGITASQYLQLQEPEAIIIAPTRELINQIYLDARKFSYGT 378 >sp|P0C2N8|DRS1_NEUCR ATP-dependent RNA helicase drs1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-11 PE=3 SV=1 Length=829 Score = 292 bits (747), Expect = 5e-86, Method: Composition-based stats. Identities = 115/518 (22%), Positives = 187/518 (36%), Gaps = 79/518 (15%) Query 159 GTDKFGFGFGGTGKKSHNKQFDNYGEEFTM------HDTIGCYLDIDKGHVKFSKNGKDL 212 G D+ G G K + D ++ D + + +K + Sbjct 219 GEDEDSEGEDGEKKGEDEDEGDASDDDSVATAVEHPDDVQSSDDEEGIDEEEEAKMKEFF 278 Query 213 GLAFEIPPHMKN-QALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL------------S 259 E P K + F L L+ F P + + Sbjct 279 APEEENQPKKKGEMSSFQEMSLSRPILR-GLTSVGFTKPTPIQAKTIPISLMGKDVVGGA 337 Query 260 KAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 G ++ + +I+ P+RELA Q + + D ++ Sbjct 338 VTGSGKTAAFVVPILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLASHTD---IK 394 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 L +GG++ + Q + L D+V+ TPGR +D + ++ + + LVLDEAD +L Sbjct 395 FCLAVGGLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLED 454 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 G++D +N + +P K Q ++ SAT+ S V +L ++ P + + Sbjct 455 GFADELNEILTTLP------KSRQTMLFSATMTS-SVDRLIRAGLNKPVRIMADSQKKTA 507 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 T+ V + P + E Y + Sbjct 508 GTLVQEFVRLRPGRESKREG-------------------------------------YLL 530 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 K ++ IIF R K + F G SC LHG +R Q++ Sbjct 531 HICKTIYTERVIIFFRQKKIAHKMRIIFGLFG---------LSCAELHGSMNQAQRIQSV 581 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 E F+ G V FL+ TD+A+RG+DI GV VIN P + YVHR+GR RA R G AI+L Sbjct 582 EDFRDGKVNFLLATDLASRGLDIKGVDTVINYEAPQTPEIYVHRVGRTARAGRSGTAITL 641 Query 619 VATEKEKVWYHVCSSRGKG--CYNTRLKEDGGCTIWYN 654 A KV + ++R+ + W Sbjct 642 AAEPDRKVVKAAVKAGKSQGAKISSRIIDPADADKWQA 679 Score = 112 bits (279), Expect = 4e-24, Method: Composition-based stats. Identities = 32/107 (30%), Positives = 53/107 (50%), Gaps = 6/107 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M++F EM + I + + + + PT IQA++IP+ L G DV+ A TGSGKT AF +P+ Sbjct 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPI 351 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 ++ + K K TT + + + + A +D Sbjct 352 LERLLYRPK------KVPTTRVVILTPTRELAIQCHAVAVKLASHTD 392 >sp|A1CFV3|DBP5_ASPCL ATP-dependent RNA helicase dbp5 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp5 PE=3 SV=1 Length=487 Score = 283 bits (723), Expect = 6e-86, Method: Composition-based stats. Identities = 108/495 (22%), Positives = 198/495 (40%), Gaps = 93/495 (19%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + KN +DLGL I + ++ L G V Sbjct 69 PNNPLYSVKNFEDLGLDPRILKGLSAMNFRKPSKIQERALPLLLGNPP------KNLVGQ 122 Query 259 SKAPDGYIVKSQHSGNAQVTQ-TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 S++ G + ++V T+ + P+ALI+ P+RELA Q + + +++D Sbjct 123 SQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQIVGVVSVMGQFLDG-- 180 Query 318 LRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 LIIG D + + I VGTPG + D++ + ++++ LVLDEAD +L Sbjct 181 ----LIIGTAVPADINNRPKRLECSIAVGTPGTVMDMIKRRIMVPNKLKVLVLDEADNML 236 Query 377 SQ-GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 Q G D R+ +P + +QV++ SAT V + K + L+ E+ Sbjct 237 DQQGLGDQCIRVKALLP------RDIQVVLFSATFPDH-VHAYAAKFAPNANELTLQHEE 289 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + + + + + D+ + + T Sbjct 290 LTVEGIKQLYLDCSDEEDKYKTLVQLYGLLT----------------------------- 320 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + +IIF +T+ +E+ + +G + L G +R Sbjct 321 ----------VGSSIIFVQTRTSASEIEKRMVAEG---------HTVASLTGGIDVTKRD 361 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIG 604 + +++F+ G+ + LI T+V ARGID+ V VIN +P+ + Q Y+HRIG Sbjct 362 EIIDKFRSGEAKVLITTNVLARGIDVSTVSMVINYDIPELHRPGVPERQADFQTYLHRIG 421 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 R GR R+G++IS V+ +E + + + + +NT ++ W E+E+ Sbjct 422 RTGRFGRVGVSISFVSNREE---WDMLNQIQR-YFNTEIQRV-DTKDW-------DEVED 469 Query 665 HLNCTISQVEPDIKV 679 + TI + + Sbjct 470 IIKKTIKNTRANAQF 484 Score = 86.3 bits (212), Expect = 2e-16, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 52/116 (45%), Gaps = 7/116 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F ++G+ P I + + M++ P+ IQ ++PL+LG +++ +++G+GKT AF + Sbjct 76 VKNFEDLGLDPRILKGLSAMNFRKPSKIQERALPLLLGNPPKNLVGQSQSGTGKTAAFVL 135 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 + V + + Q KT + + S DGL + Sbjct 136 NALSRVDLSTEQMQ-----KTPQALILAPTRELARQIVGVVSVMGQFLDGLIIGTA 186 >sp|Q6FNA2|DBP10_CANGA ATP-dependent RNA helicase DBP10 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP10 PE=3 SV=1 Length=969 Score = 295 bits (754), Expect = 6e-86, Method: Composition-based stats. Identities = 100/449 (22%), Positives = 177/449 (39%), Gaps = 40/449 (9%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 GL+ I ++ + ++ + V +++ G Sbjct 117 FASFGLSKLILVNISKRGFRQPTPIQRKTIPLIL--------QNRDIVGMARTGSGKTAA 168 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ +T +A+I+ PSRELA QT + K+F + LR +L+ GG + Sbjct 169 FVLPMIEKL-KTHSSKIGARAIILSPSRELAMQTHSVFKEFSR---GTHLRSVLLTGGDS 224 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 DQ ++ D+++ TPGR L L+L V + V DEAD L G+ + +N + Sbjct 225 LEDQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEYAVFDEADRLFEMGFQEQLNELL 284 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P Q ++ SATL + V ++ + P V L E + D + + + Sbjct 285 AALPSS------RQTLLFSATLPTSLV-DFAKAGLVNPVLVRLDAESKISDNLEMLFLST 337 Query 449 NPKTDR-----LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE-------AIKILKGEY 496 + + + K + T + + N +S E E K + Sbjct 338 KNDEREANLLYILQEVIKLPLATPEQIKQLNDNKADDSDESAEEDEDKKRRKRKSFNRKA 397 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 +A + ++F T+ + L G + ++G H RK Sbjct 398 MPKANELPSEKATVVFVPTRHHVEYLSNLLKDCG---------YLVSYIYGALDQHARKS 448 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 L F+ G L+ TDVAARG+DI + V+N +LP + ++HR+GR RA G A Sbjct 449 QLYNFRIGLTSILVVTDVAARGVDIPMLANVVNYSLPASSKIFIHRVGRTARAGNRGWAY 508 Query 617 SLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 S+V+ + + G+ T + E Sbjct 509 SIVSENELPYLLDLELFLGRKILLTPMYE 537 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 31/105 (30%), Positives = 49/105 (47%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ I + + + PT IQ ++IPLIL D++ A TGSGKT AF +P+I+ Sbjct 116 SFASFGLSKLILVNISKRGFRQPTPIQRKTIPLILQNRDIVGMARTGSGKTAAFVLPMIE 175 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + K G I S + M + F+ G+ Sbjct 176 KLKTHS-----SKIGARAI--ILSPSRELAMQTHSVFKEFSRGTH 213 >sp|A5DLR3|DBP10_PICGU ATP-dependent RNA helicase DBP10 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP10 PE=3 SV=2 Length=914 Score = 293 bits (751), Expect = 7e-86, Method: Composition-based stats. Identities = 103/448 (23%), Positives = 171/448 (38%), Gaps = 37/448 (8%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 GL+ + ++ + ++ + V +++ G Sbjct 101 FASFGLSKFLLKNIAKKGFKQPTPIQRKTIPLVM--------ESRDVVGMARTGSGKTAA 152 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ +A+I+ PSRELA QT +K+F K LR +++IGG + Sbjct 153 FVLPVVEKLKSHSPKV-GVRAVILSPSRELALQTFKQVKEFTK---GTDLRSIVLIGGDS 208 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 DQ S + DI+V TPGR L L+L V ++V DEAD L G+++ +N + Sbjct 209 LEDQFSSMMTNPDILVATPGRFLHLKVEMNLDLKTVEYIVFDEADRLFEMGFAEQLNELL 268 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P Q ++ SATL V ++ + P V L E + D + Sbjct 269 VALP------PSRQSLLFSATLPRSLV-DFAKAGLSNPVLVRLDAETKISDQLQMAFFTT 321 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM-- 506 S + + +D + E + + + + K K Sbjct 322 KRTERDANLLYILSEVIKMPLATQDQIKKLKELEEGADDDDSDEEKKPKKKKRKLEKPAP 381 Query 507 -------DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I+F TK + + G ++G H RKQ L Sbjct 382 ANRLPSEHSTIVFVPTKHHVEYVTTLLRDAGHL---------VSYIYGTLDQHARKQQLY 432 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +F+ L+ TDVAARGIDI + V+N TLP + ++HR+GR RA G A S+V Sbjct 433 QFRAAYTNILVVTDVAARGIDIPVLANVVNYTLPGSSKIFIHRVGRTARAGNKGWAYSIV 492 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDG 647 ++ + GK T++ E Sbjct 493 NEKELPYLLDLELFLGKKVLLTQMHEKK 520 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 26/105 (25%), Positives = 48/105 (46%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ + + + + + PT IQ ++IPL++ DV+ A TGSGKT AF +PV++ Sbjct 100 SFASFGLSKFLLKNIAKKGFKQPTPIQRKTIPLVMESRDVVGMARTGSGKTAAFVLPVVE 159 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + S + + + + F G+D Sbjct 160 KLKSHSPKV-------GVRAVILSPSRELALQTFKQVKEFTKGTD 197 >sp|A5DAC8|DBP3_PICGU ATP-dependent RNA helicase DBP3 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP3 PE=3 SV=2 Length=534 Score = 284 bits (726), Expect = 7e-86, Method: Composition-based stats. Identities = 107/430 (25%), Positives = 176/430 (41%), Gaps = 72/430 (17%) Query 213 GLAFE---IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 L F H++ Q+ V K + D V +++ G Sbjct 124 KLGFRPILSFDHVQLQSKIAPIVTKFPKPTPIQSASWPYLLNGDDVVGVAETGSGKTFAF 183 Query 270 -QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + N +T K + L + P+RELA Q +N+ K L + I GGV Sbjct 184 GVPAINNIITDNK---KGLRVLCISPTRELALQIYDNLTMLTKNCG---LTCVAIYGGVP 237 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 Q+ ++ +VV TPGRL DL++ G ++LS + +LVLDEAD +L +G+ + I + Sbjct 238 KDQQIKAVKT-ASVVVATPGRLVDLLNDGAVDLSTIDYLVLDEADRMLEKGFEEDIKNII 296 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS--VPDTVHHVVV 446 K+ Q ++ +AT +V++L+ M+ V + D + V Sbjct 297 GC------TNKQRQTLMFTATWPK-EVRELAATFMNKAVKVSIGNRDELAANKRITQTVE 349 Query 447 PVNP--KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 ++P K RL + L + Sbjct 350 VMDPRDKERRLLQLLRQY-----------------------------------------G 368 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + ++F K + +E + G F+ +HGD +R L+ FK+G Sbjct 369 SDQKILVFALYKKEATRVEAMLRRSG---------FNVAAIHGDLSQQQRTSALDSFKRG 419 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 D L+ TDVAARG+DI V VIN+T P ++YVHRIGR GRA + G+A +L ++ Sbjct 420 DSNLLLATDVAARGLDIPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLFTEHEK 479 Query 625 KVWYHVCSSR 634 + + + Sbjct 480 HLSGALMNVL 489 Score = 92.5 bits (228), Expect = 3e-18, Method: Composition-based stats. Identities = 39/141 (28%), Positives = 58/141 (41%), Gaps = 20/141 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F + + +IA V + + PT IQ+ S P +L G DV+ AETGSGKT AF +P Sbjct 130 ILSFDHVQLQSKIAPIVTK--FPKPTPIQSASWPYLLNGDDVVGVAETGSGKTFAFGVPA 187 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--------- 111 I + + KKG + S + + YD + C Sbjct 188 INNI------ITDNKKGLRVLC--ISPTRELALQIYDNLTMLTKNCGLTCVAIYGGVPKD 239 Query 112 -QSREVKEWHGCRATKGLMKG 131 Q + VK AT G + Sbjct 240 QQIKAVKTASVVVATPGRLVD 260 >sp|Q6CM95|SUB2_KLULA ATP-dependent RNA helicase SUB2 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=SUB2 PE=3 SV=1 Length=437 Score = 281 bits (718), Expect = 8e-86, Method: Composition-based stats. Identities = 94/409 (23%), Positives = 164/409 (40%), Gaps = 62/409 (15%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 G L +A G + K+ + + Q + +++ +RELA Q N +F Sbjct 86 QSIHGTDVLCQAKSG-LGKTAVFVLSTLQQLDPVQGEVSVVVLCNARELAYQIRNEYLRF 144 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRF 366 KY+ P ++ + GG ++ + +L I+V TPGRL LV ++LS V+ Sbjct 145 SKYM--PDVKTAVFYGGTEYKNDIDLLSKKETVPHIIVATPGRLKALVRDKHIDLSHVKN 202 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 V+DE D +L + R I + T K QV++ SATL S +++ + + + P Sbjct 203 FVIDECDKVLE---ELDMRRDVQDIFRATPRDK--QVMMFSATL-SQEIRPICRRFLQNP 256 Query 427 TWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + + E + + +N K Sbjct 257 LEIFVDDEAKLTLHGLQQYYIKLNEKE--------------------------------- 283 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 K + + + + +Q IIF ++ + + L + F + + Sbjct 284 -------KNRKLAQLLDDLEFNQVIIFVKSTVRANELTKLL---------NASNFPAITV 327 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG K ER + FK+ + R + TDV RGIDI + IN +P+E Y+HR+GR Sbjct 328 HGHMKQEERIARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYDMPNEADQYLHRVGR 387 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 GR GLAIS++++E ++ R +E + + N Sbjct 388 AGRFGTKGLAISMISSEDDEQVLAKIQERFDVKITEFPEEGVDPSTYLN 436 Score = 75.6 bits (184), Expect = 5e-13, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + + Sbjct 53 TGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTL 112 Query 62 QIV 64 Q + Sbjct 113 QQL 115 >sp|Q0I1X0|RHLB_HISS1 ATP-dependent RNA helicase RhlB OS=Histophilus somni (strain 129Pt) OX=205914 GN=rhlB PE=3 SV=1 Length=419 Score = 280 bits (716), Expect = 8e-86, Method: Composition-based stats. Identities = 97/399 (24%), Positives = 161/399 (40%), Gaps = 59/399 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYID 314 ++ G + + + Q + + P+ALI+ P+REL Q N+ + Sbjct 51 GQAQTGTGKTIAFLTATFHHLLQKNNINSSEQPRALILAPTRELVVQIANDANFL---VQ 107 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 L+ L GG QL V++ G+DI++GT GR+ D V G + L ++ +VLDEAD Sbjct 108 ATGLKTGLAYGGEGYDKQLKVIDQGIDILIGTTGRVIDYVKQGIIRLDYIQVVVLDEADR 167 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 + G+ I + + P ++ ++ SATL S+ V++L+ + M+ P +V+++ Sbjct 168 MFDLGFIRDIRYLLRKCP----VPQQRLTMLFSATL-SYKVRELAFEHMNDPQYVEIEPL 222 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + E K Sbjct 223 QKTGHRIR----------------------------------------EELFYPSNQDKM 242 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + ++E ++ IIF TK C+ + Y G L GD +R Sbjct 243 ALLMTLLEEEWPERCIIFSNTKHRCEEIWGYLSADG---------HRVGLLTGDVMQKKR 293 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 L++F G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G+ Sbjct 294 LSLLKQFTDGTLDILVATDVAARGLHIPDVTHVFNYDLPDDCEDYVHRIGRTGRAGESGI 353 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 +IS E + G ++ Sbjct 354 SISFACEEYAINLPAIEEYIGHSIPVSQYDAKALIEDLP 392 Score = 92.9 bits (229), Expect = 1e-18, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 114/352 (32%), Gaps = 60/352 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + + QA++E + T IQA S+P+ L G D+ A+TG+GKT AF + Sbjct 11 FSDLALHRSVQQAIKEKGFEFCTPIQALSLPITLKGQDIAGQAQTGTGKTIAF----LTA 66 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + L + + + + + + F + + GL Sbjct 67 TFHHLLQKNNINSSEQPRALILAPTRELVVQI-ANDANFLVQATGL-------------- 111 Query 124 ATKGLMKGKHYY-EVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNY 182 T G+ Y ++ DQG+ + +GT + G Sbjct 112 KTGLAYGGEGYDKQLKVIDQGI----------DILIGTTGRVIDYVKQGIIRL------- 154 Query 183 GEEFTMHDTIGCYLDIDKGHVKFSKNG----KDLGLAFEIPPHMKNQALFPACVLKNAEL 238 D I + +D+ F + L +P K EL Sbjct 155 -------DYIQVVV-LDEADRMFDLGFIRDIRYLLRKCPVPQQRLTMLFSATLSYKVREL 206 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 F + + + + S A + + +I ++ Sbjct 207 AFEHMNDPQYVEIEPLQKTGHRIREELFYPSNQDKMALLMTLLEEEWPERCIIFSNTK-- 264 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ Y+ R L+ G V + +LS+L+ +DI+V T Sbjct 265 -----HRCEEIWGYLSADGHRVGLLTGDVMQKKRLSLLKQFTDGTLDILVAT 311 >sp|B0UUZ9|RHLB_HISS2 ATP-dependent RNA helicase RhlB OS=Histophilus somni (strain 2336) OX=228400 GN=rhlB PE=3 SV=1 Length=419 Score = 280 bits (716), Expect = 8e-86, Method: Composition-based stats. Identities = 97/399 (24%), Positives = 161/399 (40%), Gaps = 59/399 (15%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYID 314 ++ G + + + Q + + P+ALI+ P+REL Q N+ + Sbjct 51 GQAQTGTGKTIAFLTATFHHLLQKNNINSSEQPRALILAPTRELVVQIANDANFL---VQ 107 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 L+ L GG QL V++ G+DI++GT GR+ D V G + L ++ +VLDEAD Sbjct 108 ATGLKTGLAYGGEGYDKQLKVIDRGIDILIGTTGRVIDYVKQGIIRLDYIQVVVLDEADR 167 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 + G+ I + + P ++ ++ SATL S+ V++L+ + M+ P +V+++ Sbjct 168 MFDLGFIRDIRYLLRKCP----VPQQRLTMLFSATL-SYKVRELAFEHMNDPQYVEIEPL 222 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + E K Sbjct 223 QKTGHRIR----------------------------------------EELFYPSNQDKM 242 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + ++E ++ IIF TK C+ + Y G L GD +R Sbjct 243 ALLMTLLEEEWPERCIIFSNTKHRCEEIWGYLSADG---------HRVGLLTGDVMQKKR 293 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 L++F G + L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA G+ Sbjct 294 LSLLKQFTDGTLDVLVATDVAARGLHIPDVTHVFNYDLPDDCEDYVHRIGRTGRAGESGI 353 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 +IS E + G ++ Sbjct 354 SISFACEEYAINLPAIEEYIGHSIPVSQYDAKALIEDLP 392 Score = 90.2 bits (222), Expect = 9e-18, Method: Composition-based stats. Identities = 58/352 (16%), Positives = 114/352 (32%), Gaps = 60/352 (17%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + + QA++E + T IQA S+P+ L G D+ A+TG+GKT AF + Sbjct 11 FSDLALHRIVQQAIKEKGFEFCTPIQALSLPITLKGQDIAGQAQTGTGKTIAF----LTA 66 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + L + + + + + + F + + GL Sbjct 67 TFHHLLQKNNINSSEQPRALILAPTRELVVQI-ANDANFLVQATGL-------------- 111 Query 124 ATKGLMKGKHYY-EVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNY 182 T G+ Y ++ D+G+ + +GT + G Sbjct 112 KTGLAYGGEGYDKQLKVIDRGI----------DILIGTTGRVIDYVKQGIIRL------- 154 Query 183 GEEFTMHDTIGCYLDIDKGHVKFSKNG----KDLGLAFEIPPHMKNQALFPACVLKNAEL 238 D I + +D+ F + L +P K EL Sbjct 155 -------DYIQVVV-LDEADRMFDLGFIRDIRYLLRKCPVPQQRLTMLFSATLSYKVREL 206 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 F + + + + S A + + +I ++ Sbjct 207 AFEHMNDPQYVEIEPLQKTGHRIREELFYPSNQDKMALLMTLLEEEWPERCIIFSNTK-- 264 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 + ++ Y+ R L+ G V + +LS+L+ +D++V T Sbjct 265 -----HRCEEIWGYLSADGHRVGLLTGDVMQKKRLSLLKQFTDGTLDVLVAT 311 >sp|P26196|DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 OS=Homo sapiens OX=9606 GN=DDX6 PE=1 SV=2 Length=483 Score = 282 bits (722), Expect = 8e-86, Method: Composition-based stats. Identities = 98/433 (23%), Positives = 169/433 (39%), Gaps = 66/433 (15%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 KDL + K C+ + + E P ++ + ++ + + ++ Sbjct 81 KDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA 140 Query 270 QHSGN-------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 ++ + + + +A+++ P+RELA Q Q K++ + + Sbjct 141 KNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGA--KVMA 198 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG RD + L++ V +V+ TPGR+ DL+ G + V+ +VLDEAD LLSQ + Sbjct 199 TTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQ 258 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + +P K Q+++ SAT V+K + P ++L E+ V Sbjct 259 IMEDIILTLP------KNRQILLYSATFP-LSVQKFMNSHLQKPYEINLM-EELTLKGVT 310 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + K Sbjct 311 QYYAYVTERQ----------------------------------------KVHCLNTLFS 330 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +++Q+IIFC + + L + Q G +SC +H + R + F+ Sbjct 331 RLQINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFR 381 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R L+CTD+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Sbjct 382 NGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYD 441 Query 623 KEKVWYHVCSSRG 635 + G Sbjct 442 DRFNLKSIEEQLG 454 Score = 92.9 bits (229), Expect = 2e-18, Method: Composition-based stats. Identities = 33/128 (26%), Positives = 57/128 (45%), Gaps = 3/128 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW---H 120 + + Q T Q++ + G+ + G + ++ H Sbjct 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217 Query 121 GCRATKGL 128 AT G Sbjct 218 VVIATPGR 225 >sp|Q2GUI4|DBP3_CHAGB ATP-dependent RNA helicase DBP3 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP3 PE=3 SV=1 Length=566 Score = 285 bits (728), Expect = 9e-86, Method: Composition-based stats. Identities = 106/383 (28%), Positives = 163/383 (43%), Gaps = 49/383 (13%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP--------KALIVEPSRELAEQTL 303 + +++ G + + + PN +A++V P+RELA QT Sbjct 218 GRDVIGIAETGSGKTMAFAV-PCIESLASSPKPNHAKGDRTAYARAVVVSPTRELAMQTH 276 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVVGTPGRLDDLVSTGKLNL 361 + + L + + GG DQ ++L G DI+V TPGRL D +S G ++L Sbjct 277 AAMSSLASLVG---LSVVCLYGGAPKDDQRALLRKNSGADIIVATPGRLKDFLSEGCVSL 333 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 S V F VLDEAD +L +G+ + I + ++ Q ++ +AT + V+ L+E Sbjct 334 SDVMFAVLDEADRMLDKGFEEDIKLILG----SCRPREKRQTLMFTATWPT-SVRGLAEG 388 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 M P + + L + V D Sbjct 389 FMIDPVKATIGNRTRAGE----------EGEGNGSTELQANIRIEQKVEVVDPRGKEQRL 438 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 E+ EA K K D+ ++FC K + +EQ ++G Sbjct 439 LELLKEAQK-----------GSAKNDRILVFCLYKKEAVRVEQNLERRG---------IR 478 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 +HGD + +R ++LE FK G L+ TDVAARG+DI V VINVT P ++YVH Sbjct 479 VCSIHGDLRQDQRTRSLESFKAGTTSVLVATDVAARGLDIPEVKLVINVTFPLTIEDYVH 538 Query 602 RIGRVGRAERMGLAISLVATEKE 624 RIGR GRA + G AI+L + Sbjct 539 RIGRTGRAGKKGKAITLFTEHDK 561 Score = 89.8 bits (221), Expect = 2e-17, Method: Composition-based stats. Identities = 29/84 (35%), Positives = 41/84 (49%), Gaps = 1/84 (1%) Query 22 WLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ-EGKKGKTT 80 + PT IQA S P L G DV+ AETGSGKT AF++P I+ + + K +G + Sbjct 201 FTAPTPIQAASWPFALSGRDVIGIAETGSGKTMAFAVPCIESLASSPKPNHAKGDRTAYA 260 Query 81 IKTGASVLNKWQMNPYDRGSAFAI 104 S + M + S+ A Sbjct 261 RAVVVSPTRELAMQTHAAMSSLAS 284 >sp|A1D6X9|DBP8_NEOFI ATP-dependent RNA helicase dbp8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp8 PE=3 SV=1 Length=526 Score = 283 bits (725), Expect = 1e-85, Method: Composition-based stats. Identities = 107/478 (22%), Positives = 180/478 (38%), Gaps = 74/478 (15%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L +A + + A+ ++ A + + + S+ G + Sbjct 101 LNVAPWLVGSLTTMAVRKPTAIQKACIP--------EILKGRDCIGGSRTGSGKTIAFSV 152 Query 272 SGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 + + P +++ P+RELA Q IK ++ +LI GG R Sbjct 153 ---PMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISA---PQSMKPVLITGGTDMRP 206 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRM 387 Q L +V+ TPGRL D + + + L +VR +VLDEAD LL+ G + + Sbjct 207 QAIALAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRLLASGPGSMLPDV 266 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKL------SEKIMHFPTWVDLKGEDSVPDTV 441 + + + Q ++ +AT+ +V+ L + K F T + + + S+P T+ Sbjct 267 ETCLSALPPSSE-RQTLLFTATVTP-EVRALKNMPRSANKPPVFVTEISTENQGSIPPTL 324 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V L R H+ + + Sbjct 325 KQTYLKVP-----LTHREAFLHV---------------------------------LLST 346 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 +++ AIIFC D LE+ + LH ER NL RF Sbjct 347 EDNASRPAIIFCNHTKTADLLERMLRRL---------THRVTSLHSLLPQSERNANLARF 397 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + R L+ TDVA+RG+DI V VIN +P +YVHR+GR RA R G AI+LV Sbjct 398 RASAARILVATDVASRGLDIPTVSLVINYDVPRNPDDYVHRVGRTARAGRSGEAITLVGQ 457 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 ++ + G+ +E +L E+ E + +++ V Sbjct 458 RDVQLVLAIEERVGRQMEEWS-EEGVSIEGRLVRTGVLKEVGEAKREAMGEIDEGRDV 514 Score = 98.3 bits (243), Expect = 5e-20, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 46/103 (45%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AFS+P++ Sbjct 96 SSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPML 155 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q E + + + +++ A + Sbjct 156 QKWAE---------DPFGIFGVVLTPTRELALQIFEQIKAISA 189 >sp|A5DBI5|DBP5_PICGU ATP-dependent RNA helicase DBP5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP5 PE=3 SV=1 Length=482 Score = 282 bits (721), Expect = 1e-85, Method: Composition-based stats. Identities = 107/462 (23%), Positives = 192/462 (42%), Gaps = 83/462 (18%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ ++LGL+ E+ + ++ L + S++ G Sbjct 92 KSFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLISNPP------KNMIGQSQSGTGKT 145 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + +++ + + + P+RELA QTL I K+ K+ L++ Sbjct 146 AAFSLT---MLSRVDVNDPNTQCICLSPTRELARQTLEVITTMGKF---TKVTTQLVVPQ 199 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFIN 385 ++Q + IVVGTPG L D++ L +V+ VLDEAD +L QG + Sbjct 200 AMEKNQGTQ----AHIVVGTPGTLLDMIKRKLLRTGKVKVFVLDEADNMLDGQGLAAQCI 255 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 R+ +P Q+++ SAT + +V+K +EK + ++LK E+ D + + Sbjct 256 RVKKVLPTS------CQLVLFSATFPT-EVRKYAEKFVPNANSLELKQEELNVDAIKQLY 308 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + + + E+ SE +L Sbjct 309 MDCDSEKHK---------------------------AEVLSELYGLL------------T 329 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + +IIF +TK + L +G +C LH D ER + ++ F++G Sbjct 330 IGSSIIFVKTKATANYLYAKMKSEG---------HACSILHSDLDNSERDKLIDDFREGR 380 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQN------YVHRIGRVGRAERMGLAISLV 619 + LI T+V ARGIDI V V+N +P +K + Y+HRIGR GR R+G+A+S V Sbjct 381 SKVLITTNVLARGIDIASVSMVVNYDIPVDKDDKPDPSTYLHRIGRTGRFGRVGVAVSFV 440 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 +K + + R Y ++ T ++E++ + + Sbjct 441 H--DKKSYEDLEQIRS---YFNDIEMTRVPTDDWDEVEKIVK 477 Score = 88.6 bits (218), Expect = 3e-17, Method: Composition-based stats. Identities = 21/106 (20%), Positives = 49/106 (46%), Gaps = 11/106 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ PE+ + + M + P+ IQ +++PL++ +++ +++G+GKT AFS+ Sbjct 91 VKSFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSL 150 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 ++ V + Q S + + + Sbjct 151 TMLSRVDVNDPNTQ---------CICLSPTRELARQTLEVITTMGK 187 >sp|Q4WRV2|DRS1_ASPFU ATP-dependent RNA helicase drs1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=drs1 PE=3 SV=1 Length=830 Score = 291 bits (745), Expect = 1e-85, Method: Composition-based stats. Identities = 105/482 (22%), Positives = 188/482 (39%), Gaps = 73/482 (15%) Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 F+++ +D L+ I + + ++ + V + G Sbjct 308 FNRSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVAL--------LGKDIVGSAVTGSG 359 Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 ++ + I+ P+RELA Q N + + D + ++ Sbjct 360 KTAAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATHTD---ITFCQLV 416 Query 325 GGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + R+Q ++L+ D+++ TPGR +D + ++ + + LVLDEAD +L G++D Sbjct 417 GGFSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADE 476 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 +N + IP K Q ++ SAT+ V KL ++ P + + + + + Sbjct 477 LNEILTTIP------KSRQTMLFSATMTD-SVDKLIRVGLNRPVRLMVDSKKNTSMNLTQ 529 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V + P R +RLG Y + E Sbjct 530 EFVRLRP--GREDKRLG-----------------------------------YLLYLCNE 552 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + I+F R K + + F G LHG +R +++E F++ Sbjct 553 IYTGRVIVFFRQKREAHRVRIVFGLLG---------LKAAELHGSMSQEQRIKSVENFRE 603 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G V FL+ TD+A+RG+DI GV VIN P + Y+HR+GR RA R G A ++ A Sbjct 604 GKVAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPD 663 Query 624 EKVWYHVCSS--RGKGCYNTRLKEDGGCTIWYNEMQLLSEI------EEHLNCTISQVEP 675 K+ + +R+ + W + + L + EE L ++Q E Sbjct 664 RKIVKSAVKAGKAQGAKIVSRVVDPAVADEWAAKAKGLEDEIEEVLQEEKLEKQMAQAEM 723 Query 676 DI 677 + Sbjct 724 QV 725 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 54/111 (49%), Gaps = 6/111 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F + + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P++ Sbjct 310 RSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL 369 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 + + +K T+ + + Y+ + A +D CQ Sbjct 370 ERLLFRP------RKVPTSRVAILMPTRELAVQCYNVATKLATHTDITFCQ 414 >sp|Q6CCZ1|PRP5_YARLI Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=PRP5 PE=3 SV=1 Length=974 Score = 294 bits (752), Expect = 1e-85, Method: Composition-based stats. Identities = 97/454 (21%), Positives = 186/454 (41%), Gaps = 48/454 (11%) Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 +K + T + P +I+ P+REL Q +++ F ++ L + GG Sbjct 440 IKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQIYRDLRPFLAALE---LTAVCAYGG 496 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDF 383 +DQ++ L+ G I+V TPGR+ DL+ L+LS+V FLV+DEAD + G+ Sbjct 497 SPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDMGFEPQ 556 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-------PTWVDLKGEDS 436 + ++ I Q ++ SAT +++L+ +++ P + + Sbjct 557 VLKLTQSI------RPDRQTVLFSATFPK-KMEQLARRVLSKRSSDSLGPIEIIVGARSV 609 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 V + V + + L + + + E + I Sbjct 610 VASEITQFVEVFQNEKSKFPRLLEVLGKYFAQGFFDEQSEGRVGTGESAATPI------- 662 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 + +IF + D+L + IQ G + C+ +HG ++ +R Q Sbjct 663 --------PNPKCLIFVERQESADSLLKELIQSG---------YPCLSIHGGKEQADRDQ 705 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 + FK G V LI T VAARG+D+ G+ V+N P+ ++YVHR+GR GRA + G A+ Sbjct 706 AISDFKSGLVSVLIATSVAARGLDVKGLGLVVNWDSPNHMEDYVHRVGRTGRAGQKGTAL 765 Query 617 SLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 + + +++E++ + + + +++ +E + +E Sbjct 766 TFLLSDQERLAAEISRAIKSSGNAPPAPVQLMTERFEFKVRSGTEKRHMYGFSGKGLER- 824 Query 677 IKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAP 710 DE D + ++ G + + + P Sbjct 825 ---LQDERDATREHERRAYEGDEAGEAETESSTP 855 Score = 105 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 77/372 (21%), Positives = 137/372 (37%), Gaps = 53/372 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ ++++G+ + ++ + PT IQA++IP ++ G DV+ A+TGSGKT AF +P+ Sbjct 377 ISKWTQLGLPGPTMGVLNDLRYDKPTSIQAQAIPAVMSGRDVISVAKTGSGKTLAFLLPM 436 Query 61 IQIVYETLKDQQEGKKGKTTIKTGAS---------VLNKWQMNPYDRGSAF--AIGSDGL 109 ++ + + G + TT +GAS + + Y F A+ + Sbjct 437 LRHIKH-----RVGVETHTTTLSGASSHPLGVIITPTRELCVQIYRDLRPFLAALELTAV 491 Query 110 CCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGG 169 C + L KG H + G + L + F Sbjct 492 CAYGGSPIKDQIA----ALKKGTH---IIVCTPGRM-IDLLAANQGRVLSLSRVTFLVID 543 Query 170 TGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNG--KDLGLAFEIPPHMKNQAL 227 + + F+ + T + D+ V FS K LA + + +L Sbjct 544 EADRMFDMGFEPQVLKLTQS------IRPDRQTVLFSATFPKKMEQLARRVLSKRSSDSL 597 Query 228 FP---------ACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 P + + F E+ KFP + A + +S+ + Sbjct 598 GPIEIIVGARSVVASEITQFVEVFQNEKSKFPRLLEVLGKYFAQGFFDEQSEGRVGTGES 657 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG--VAARDQ-LSV 335 +PN PK LI +E A+ K + L I GG A RDQ +S Sbjct 658 AATPIPN-PKCLIFVERQESAD-------SLLKELIQSGYPCLSIHGGKEQADRDQAISD 709 Query 336 LENG-VDIVVGT 346 ++G V +++ T Sbjct 710 FKSGLVSVLIAT 721 >sp|Q6CIR0|DBP10_KLULA ATP-dependent RNA helicase DBP10 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP10 PE=3 SV=1 Length=973 Score = 294 bits (752), Expect = 1e-85, Method: Composition-based stats. Identities = 109/451 (24%), Positives = 182/451 (40%), Gaps = 40/451 (9%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 GL+ + ++ + ++ + K V +++ G Sbjct 128 FASFGLSKLVLINISKKGFRQPTPIQRKTIPLIL--------QKRDIVGMARTGSGKTAA 179 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ +T +A+I+ PSRELA QT K+F K LR +L+ GG + Sbjct 180 FVLPMIEKL-KTHSAKIGVRAVILSPSRELAIQTHRVFKEFSK---GSDLRSILLTGGDS 235 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 DQ ++ D+V+ TPGR L L+L V ++V DEAD L G+ + +N + Sbjct 236 LEDQFGMMMGNPDVVIATPGRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELL 295 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 P Q ++ SATL S V ++ + P V L E + + + + + + Sbjct 296 VAFPT------NRQTLLFSATLPSSLV-DFAKAGLSNPVLVRLDAETKISENLEMLFISI 348 Query 449 NPKTDR-----LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 L + K + T+ K + A+S SE K K + A ++ + Sbjct 349 KKDEREANLLYLLQEAIKMPVATESQIKKLKQQNDADSDSDDSEDEKKKKAKKAKKSKRR 408 Query 504 HKM-------DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 I+F T+ + + Q G + ++G H RKQ Sbjct 409 LPNANEMPSEKATIVFVPTRHHVEYVTQLLKNCG---------YLVSYIYGALNQHARKQ 459 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 L F+ G L+ TDVAARG+DI + VIN +LP + ++HR+GR RA G A Sbjct 460 QLYNFRAGLTSILVVTDVAARGVDIPLLANVINYSLPGSSKIFIHRVGRTARAGNRGWAF 519 Query 617 SLVATEKEKVWYHVCSSRGKGCYNTRLKEDG 647 S+V+ + + GK T + E Sbjct 520 SIVSENELPYLLDLELFLGKKILLTPMYESS 550 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 30/105 (29%), Positives = 50/105 (48%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ + + + + PT IQ ++IPLIL D++ A TGSGKT AF +P+I+ Sbjct 127 SFASFGLSKLVLINISKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIE 186 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + K G + S + + + F+ GSD Sbjct 187 KLKTHS-----AKIGVRAV--ILSPSRELAIQTHRVFKEFSKGSD 224 >sp|Q6FM43|PRP28_CANGA Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=PRP28 PE=3 SV=1 Length=582 Score = 285 bits (728), Expect = 1e-85, Method: Composition-based stats. Identities = 95/392 (24%), Positives = 166/392 (42%), Gaps = 61/392 (16%) Query 253 DGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLNNI 306 + ++ G + A++ P + P AL++ P+RELA+Q I Sbjct 214 RDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEI 273 Query 307 KQF-KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 + + + L + I+GG + D L NG DI++ TPGRL D++ + L++++ Sbjct 274 NRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQ 333 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 LVLDEAD ++ G+ D + + + + + + Q ++ +ATL S V+ +++ + Sbjct 334 SLVLDEADRMIDLGFEDQMKSILSHL--MADELAARQTMLFTATL-SSSVESIAKGYLKN 390 Query 426 PTWVDLKGE-DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 P V + DS + VV +L Sbjct 391 PLHVSVGSRWDSDKPLITQVVRHTGDDDKKLS---------------------------- 422 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 LK + + AIIF K D L +F+ V Sbjct 423 ------FLKDDLIKNGL------PAIIFINYKETADWLTLRL----------SDRFNIVT 460 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHG + +R+ +++ K G LI T+VAARG+DI V V+N + + +Y+HRIG Sbjct 461 LHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDIPDVALVVNFQMSKKFDDYIHRIG 520 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 R GRA + G+A++ + E++ + K Sbjct 521 RTGRAGKTGIAVTYLTGEEDPQLIKQLAKYVK 552 Score = 81.3 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 28/109 (26%), Positives = 45/109 (41%), Gaps = 7/109 (6%) Query 1 MAAFSEMGVMP-EIAQAVEE-MDWLLPTDIQAESIPLILGG-----GDVLMAAETGSGKT 53 + +SE V+P ++ +A+ E M + PT IQ +IP + D+L A TGSGKT Sbjct 168 LRNWSETNVIPTDLVRALTEGMGFDEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKT 227 Query 54 GAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 AFSIP++ + K + + + Sbjct 228 LAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEINRL 276 >sp|A5DF03|PRP28_PICGU Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PRP28 PE=3 SV=2 Length=575 Score = 285 bits (728), Expect = 1e-85, Method: Composition-based stats. Identities = 101/449 (22%), Positives = 183/449 (41%), Gaps = 68/449 (15%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 K+ G+ + + ++ A + G + V +++ G + Sbjct 153 KESGIPTTLLNTIDQLGYKEPTPIQRAAIPTALGHRD--------VVGIAETGSGKTLAF 204 Query 270 QHSGNAQVTQT-----------KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 + ++ + N L++ P+RELA Q K+F + Sbjct 205 LIPLLSYLSAIDKDYMEVEHKQESNLNKVLGLVLAPTRELALQISKEAKKFASVLG---Y 261 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 + IIGG + + +++G IVV TPGRL D G ++LSQ L +DEAD ++ Sbjct 262 NVVTIIGGHQYEETVKSVQDGAHIVVATPGRLIDSAEKGLIDLSQCYHLTMDEADRMIDM 321 Query 379 GYSDFINRMHNQIPQVTSDG----------KRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 G+ + + + +P +S G K ++ +AT+ S ++K+++ + P + Sbjct 322 GFEKALQSILSFLPSTSSSGFGLDSTIFKVKSRITLMFTATI-SPPIEKITKDYLQTPAY 380 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 + + + D ++ E LG + ++++A + + Sbjct 381 LYIGDAGEIVDNINQKF-----------EYLGDNVDSQEELNAPRTNKMISA-------- 421 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + I+E + IIF K C+ L Q G S + +HG Sbjct 422 --------LRQHIRETEQPLIIIFANFKRTCELLSVELSNQNVG--------SNIVIHGS 465 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + R+ + F++ V LI TDVAARGIDI V V+N +P Y+HRIGR GR Sbjct 466 KSQEARESAIASFREHKVNVLIATDVAARGIDIPNVSLVVNYHMPKRFDEYIHRIGRTGR 525 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKG 637 A + G ++S V ++ ++ S KG Sbjct 526 AGKSGASLSFVDDGDSEILVNLKSFLSKG 554 Score = 105 bits (263), Expect = 2e-22, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 7/110 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + ++ E G+ + ++++ + PT IQ +IP LG DV+ AETGSGKT AF IP+ Sbjct 149 LRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPL 208 Query 61 IQIVYETLKD------QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + KD +QE K + + + + FA Sbjct 209 LSYLSAIDKDYMEVEHKQESNLNK-VLGLVLAPTRELALQISKEAKKFAS 257 >sp|Q8P4D4|RHLB_XANCP ATP-dependent RNA helicase RhlB OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=rhlB PE=3 SV=1 Length=573 Score = 284 bits (727), Expect = 1e-85, Method: Composition-based stats. Identities = 95/381 (25%), Positives = 155/381 (41%), Gaps = 62/381 (16%) Query 257 ALSKAPDGYIVKSQHSGNAQV----TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + ++ P P+ALI+ P+RELA Q + +F Sbjct 51 GQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGA- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDE 371 + LR L+ GGV Q +L+ GVD+++ TPGRL D V ++L VLDE Sbjct 110 --DLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDE 167 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD + G+ I + ++P+ Q ++ SATL S V +L+ + M+ P + + Sbjct 168 ADRMFDLGFIKDIRFLLRRMPE----RGTRQTLLFSATL-SHRVLELAYEHMNEPEKLVV 222 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + E V + + + Sbjct 223 ETETITAARVRQRIYFPSDEE--------------------------------------- 243 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + + + ++F TK + + + + G + L GD Sbjct 244 -KQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHG---------YRVGVLSGDVPQ 293 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R+ L RF+KG + L+ TDVAARG+ I GV YV N LP + ++YVHRIGR R Sbjct 294 KKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGE 353 Query 612 MGLAISLVATEKEKVWYHVCS 632 G AIS + + Sbjct 354 EGDAISFACERYAMSLPDIEA 374 Score = 98.3 bits (243), Expect = 4e-20, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (44%), Gaps = 2/103 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 10 TFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMN 69 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + ++ +K + + + + + F Sbjct 70 RLL--IRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGAD 110 >sp|B0RWT6|RHLB_XANCB ATP-dependent RNA helicase RhlB OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=rhlB PE=3 SV=1 Length=573 Score = 284 bits (727), Expect = 1e-85, Method: Composition-based stats. Identities = 95/381 (25%), Positives = 155/381 (41%), Gaps = 62/381 (16%) Query 257 ALSKAPDGYIVKSQHSGNAQV----TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + ++ P P+ALI+ P+RELA Q + +F Sbjct 51 GQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGA- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDE 371 + LR L+ GGV Q +L+ GVD+++ TPGRL D V ++L VLDE Sbjct 110 --DLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDE 167 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD + G+ I + ++P+ Q ++ SATL S V +L+ + M+ P + + Sbjct 168 ADRMFDLGFIKDIRFLLRRMPE----RGTRQTLLFSATL-SHRVLELAYEHMNEPEKLVV 222 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + E V + + + Sbjct 223 ETETITAARVRQRIYFPSDEE--------------------------------------- 243 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + + + ++F TK + + + + G + L GD Sbjct 244 -KQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHG---------YRVGVLSGDVPQ 293 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R+ L RF+KG + L+ TDVAARG+ I GV YV N LP + ++YVHRIGR R Sbjct 294 KKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGE 353 Query 612 MGLAISLVATEKEKVWYHVCS 632 G AIS + + Sbjct 354 EGDAISFACERYAMSLPDIEA 374 Score = 98.3 bits (243), Expect = 4e-20, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (44%), Gaps = 2/103 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 10 TFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMN 69 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + ++ +K + + + + + F Sbjct 70 RLL--IRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGAD 110 >sp|Q4UPY5|RHLB_XANC8 ATP-dependent RNA helicase RhlB OS=Xanthomonas campestris pv. campestris (strain 8004) OX=314565 GN=rhlB PE=3 SV=1 Length=573 Score = 284 bits (727), Expect = 1e-85, Method: Composition-based stats. Identities = 95/381 (25%), Positives = 155/381 (41%), Gaps = 62/381 (16%) Query 257 ALSKAPDGYIVKSQHSGNAQV----TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + ++ P P+ALI+ P+RELA Q + +F Sbjct 51 GQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGA- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDE 371 + LR L+ GGV Q +L+ GVD+++ TPGRL D V ++L VLDE Sbjct 110 --DLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDE 167 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD + G+ I + ++P+ Q ++ SATL S V +L+ + M+ P + + Sbjct 168 ADRMFDLGFIKDIRFLLRRMPE----RGTRQTLLFSATL-SHRVLELAYEHMNEPEKLVV 222 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + E V + + + Sbjct 223 ETETITAARVRQRIYFPSDEE--------------------------------------- 243 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + + + ++F TK + + + + G + L GD Sbjct 244 -KQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHG---------YRVGVLSGDVPQ 293 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R+ L RF+KG + L+ TDVAARG+ I GV YV N LP + ++YVHRIGR R Sbjct 294 KKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGE 353 Query 612 MGLAISLVATEKEKVWYHVCS 632 G AIS + + Sbjct 354 EGDAISFACERYAMSLPDIEA 374 Score = 98.3 bits (243), Expect = 4e-20, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (44%), Gaps = 2/103 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 10 TFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMN 69 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + ++ +K + + + + + F Sbjct 70 RLL--IRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGAD 110 >sp|Q5ZKB9|DDX6_CHICK Probable ATP-dependent RNA helicase DDX6 OS=Gallus gallus OX=9031 GN=DDX6 PE=2 SV=1 Length=483 Score = 282 bits (720), Expect = 1e-85, Method: Composition-based stats. Identities = 98/433 (23%), Positives = 169/433 (39%), Gaps = 66/433 (15%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 KDL + K C+ + + E P ++ + ++ + + ++ Sbjct 81 KDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA 140 Query 270 QHSGN-------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 ++ + + + +A+++ P+RELA Q Q K++ + + Sbjct 141 KNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGA--KVMA 198 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG RD + L++ V +V+ TPGR+ DL+ G + V+ +VLDEAD LLSQ + Sbjct 199 TTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQ 258 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + +P K Q+++ SAT V+K + P ++L E+ V Sbjct 259 IMEDIILTLP------KNRQILLYSATFP-LSVQKFMNSHLQKPYEINLM-EELTLKGVT 310 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + K Sbjct 311 QYYAYVTERQ----------------------------------------KVHCLNTLFS 330 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +++Q+IIFC + + L + Q G +SC +H + R + F+ Sbjct 331 RLQINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFR 381 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R L+CTD+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Sbjct 382 NGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYD 441 Query 623 KEKVWYHVCSSRG 635 + G Sbjct 442 DRFNLKSIEEQLG 454 Score = 92.9 bits (229), Expect = 2e-18, Method: Composition-based stats. Identities = 33/128 (26%), Positives = 57/128 (45%), Gaps = 3/128 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW---H 120 + + Q T Q++ + G+ + G + ++ H Sbjct 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217 Query 121 GCRATKGL 128 AT G Sbjct 218 VVIATPGR 225 >sp|Q9WTM2|DDX6_CAVPO Probable ATP-dependent RNA helicase DDX6 (Fragment) OS=Cavia porcellus OX=10141 GN=DDX6 PE=2 SV=1 Length=472 Score = 281 bits (719), Expect = 1e-85, Method: Composition-based stats. Identities = 98/433 (23%), Positives = 167/433 (39%), Gaps = 66/433 (15%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 KDL + K C+ + + E P ++ + ++ + ++ Sbjct 70 KDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALTGRDILARA 129 Query 270 QHSGN-------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 ++ + + + +A+++ P+RELA Q Q K++ + + Sbjct 130 KNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGA--KVMA 187 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG RD + L++ V +V+ TPGR+ DL+ G + V+ +VLDEAD LLSQ + Sbjct 188 TTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQ 247 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + +P K Q+++ SAT V+K + P ++L E+ V Sbjct 248 IMEDIILTLP------KNRQILLYSATFP-LSVQKFMNSHLQKPYEINLM-EELTLKGVT 299 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + K Sbjct 300 QYYAYVTERQ----------------------------------------KVHCLNTLFP 319 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + +Q+IIFC + + L + Q G +SC +H + R + F+ Sbjct 320 RLQTNQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFR 370 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R L+CTD+ RGIDI V VIN P + Y+HRIGR GR +GLAI+L+ + Sbjct 371 NGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYD 430 Query 623 KEKVWYHVCSSRG 635 + G Sbjct 431 DRFNLKSIEEQLG 443 Score = 92.1 bits (227), Expect = 3e-18, Method: Composition-based stats. Identities = 33/128 (26%), Positives = 57/128 (45%), Gaps = 3/128 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 87 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALTGRDILARAKNGTGKSGAYLIPLLER 146 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW---H 120 + + Q T Q++ + G+ + G + ++ H Sbjct 147 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 206 Query 121 GCRATKGL 128 AT G Sbjct 207 VVIATPGR 214 >sp|Q54Y81|DDX23_DICDI ATP-dependent RNA helicase ddx23 OS=Dictyostelium discoideum OX=44689 GN=helB2 PE=2 SV=1 Length=834 Score = 291 bits (744), Expect = 2e-85, Method: Composition-based stats. Identities = 104/455 (23%), Positives = 180/455 (40%), Gaps = 80/455 (18%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG----Y 265 ++ L EI ++ ++ + + + +++ G + Sbjct 416 QESNLPREILEAIRQLGYEKPSPIQMQSIPISL--------TGRDILGIAETGSGKTCAF 467 Query 266 IVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 ++ + Q TK + P AL++ P+REL +Q + F ++ R + ++ Sbjct 468 VIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFG---FRVVSLV 524 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 GG + DQ + G +I++ TPGRL+D + L L+Q ++VLDEAD ++ G+ + Sbjct 525 GGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQV 584 Query 385 NRMHNQIPQVTSDGKR---------------LQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 + + +P + I+ SAT+ V+KLS+K + P + Sbjct 585 TSVLDAMPSSFLKSEDDEMAEKQESDRSHIYRTTILFSATMPPL-VEKLSKKYLRRPCTI 643 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + V D + V+ V + D Sbjct 644 TIGEAGKVVDRIRQTVIFVKSEND------------------------------------ 667 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 K E+ + IK+ IIF K CD + P + + S LH R Sbjct 668 ---KKEHLTQLIKDGPPPPIIIFVNKKKHCDIIA---------PVLEECRVSYTILHSGR 715 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 +R+ LE FKK LI T VA+RGI + GV +VIN +P ++Y HRIGR GRA Sbjct 716 SQEQREAALEGFKKRKYEVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRA 775 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 GLA S + + ++ Y + ++ Sbjct 776 GSAGLASSFITDKDVEIMYDLKQILTSTNNIVPIE 810 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 49/103 (48%), Gaps = 1/103 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + E + EI +A+ ++ + P+ IQ +SIP+ L G D+L AETGSGKT AF IP+ Sbjct 412 IRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPM 471 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + + + + + + + FA Sbjct 472 LIYISKQPR-LTKDTEADGPYALVMAPTRELVQQIEKETRNFA 513 >sp|Q3BNH8|RHLB_XANC5 ATP-dependent RNA helicase RhlB OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) OX=316273 GN=rhlB PE=3 SV=1 Length=573 Score = 284 bits (726), Expect = 2e-85, Method: Composition-based stats. Identities = 95/395 (24%), Positives = 158/395 (40%), Gaps = 62/395 (16%) Query 257 ALSKAPDGYIVKSQHSGNAQV----TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + ++ P P+ALI+ P+RELA Q + +F Sbjct 51 GQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGA- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDE 371 + LR L+ GGV Q +L+ GVD+++ TPGRL D V ++L VLDE Sbjct 110 --DLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDE 167 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD + G+ I + ++P+ Q ++ SATL S V +L+ + M+ P + + Sbjct 168 ADRMFDLGFIKDIRFLLRRMPE----RGTRQTLLFSATL-SHRVLELAYEHMNEPEKLVV 222 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + E V + + + Sbjct 223 ETESITAARVRQRIYFPSDEE--------------------------------------- 243 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + + + ++F TK + + + + G + L GD Sbjct 244 -KQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHG---------YRVGVLSGDVPQ 293 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R+ L RF+KG + L+ TDVAARG+ I GV YV N LP + ++YVHRIGR R Sbjct 294 KKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGE 353 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 G AIS + + + + + Sbjct 354 EGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSE 388 Score = 98.7 bits (244), Expect = 4e-20, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (44%), Gaps = 2/103 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 10 TFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMN 69 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + ++ +K + + + + + F Sbjct 70 RLL--IRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGAD 110 >sp|Q8PFZ3|RHLB_XANAC ATP-dependent RNA helicase RhlB OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=rhlB PE=3 SV=1 Length=571 Score = 284 bits (726), Expect = 2e-85, Method: Composition-based stats. Identities = 95/395 (24%), Positives = 158/395 (40%), Gaps = 62/395 (16%) Query 257 ALSKAPDGYIVKSQHSGNAQV----TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + ++ P P+ALI+ P+RELA Q + +F Sbjct 51 GQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGA- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDE 371 + LR L+ GGV Q +L+ GVD+++ TPGRL D V ++L VLDE Sbjct 110 --DLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDE 167 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD + G+ I + ++P+ Q ++ SATL S V +L+ + M+ P + + Sbjct 168 ADRMFDLGFIKDIRFLLRRMPE----RGTRQTLLFSATL-SHRVLELAYEHMNEPEKLVV 222 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + E V + + + Sbjct 223 ETESITAARVRQRIYFPSDEE--------------------------------------- 243 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + + + ++F TK + + + + G + L GD Sbjct 244 -KQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHG---------YRVGVLSGDVPQ 293 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R+ L RF+KG + L+ TDVAARG+ I GV YV N LP + ++YVHRIGR R Sbjct 294 KKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGE 353 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 G AIS + + + + + Sbjct 354 EGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSE 388 Score = 98.3 bits (243), Expect = 4e-20, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 45/103 (44%), Gaps = 2/103 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 10 TFSSFDLHPALIAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMN 69 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + ++ +K + + + + + F Sbjct 70 RLL--IRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGAD 110 >sp|Q5GUR8|RHLB_XANOR ATP-dependent RNA helicase RhlB OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) OX=291331 GN=rhlB PE=3 SV=2 Length=574 Score = 284 bits (726), Expect = 2e-85, Method: Composition-based stats. Identities = 95/395 (24%), Positives = 157/395 (40%), Gaps = 62/395 (16%) Query 257 ALSKAPDGYIVKSQHSGNAQV----TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + ++ P P+ALI+ P+RELA Q + +F Sbjct 51 GQAQTGTGKTLAFLVAVMNRLLNRPALADRKPEDPRALILAPTRELAIQIHKDAVKFGA- 109 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDE 371 + LR L+ GGV Q +L+ GVD+++ TPGRL D V ++L VLDE Sbjct 110 --DLGLRFALVYGGVDYDKQRELLQQGVDVIIATPGRLIDYVKQHKVVSLHACEICVLDE 167 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD + G+ I + ++P+ Q ++ SATL S V +L+ + M+ P + + Sbjct 168 ADRMFDLGFIKDIRFLLRRMPE----RGTRQTLLFSATL-SHRVLELAYEHMNEPEKLVV 222 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + E V + + Sbjct 223 ETETITAARVRQRIYFPSDDE--------------------------------------- 243 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + + + + ++F TK + + + + G + L GD Sbjct 244 -KQTLLLGLLSRSEGARTMVFVNTKAFVERVARTLERHG---------YRVGVLSGDVPQ 293 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R+ L RF+KG + L+ TDVAARG+ I GV YV N LP + ++YVHRIGR R Sbjct 294 KKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVHRIGRTARLGE 353 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 G AIS + + + + + Sbjct 354 EGDAISFACERYAMSLPDIEAYIEQKIPVEPVTSE 388 Score = 98.3 bits (243), Expect = 5e-20, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 43/103 (42%), Gaps = 2/103 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS + P + +E + T IQA ++P+ L GGDV A+TG+GKT AF + V+ Sbjct 10 TFSSFDLHPALVAGLESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMN 69 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + +K + + + + + F Sbjct 70 RLLNRPALAD--RKPEDPRALILAPTRELAIQIHKDAVKFGAD 110 >sp|P23394|PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PRP28 PE=1 SV=2 Length=588 Score = 284 bits (727), Expect = 2e-85, Method: Composition-based stats. Identities = 100/423 (24%), Positives = 171/423 (40%), Gaps = 60/423 (14%) Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP------NAPKALIVEPSRELAEQTLN 304 F+ ++ G + +++++ P + PKALI+ P+REL +Q Sbjct 213 QYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQK 272 Query 305 NIKQFKKYID---NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL 361 ++ K N + + I+GG + + L G DI+V TPGRL D + L + Sbjct 273 ETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVM 332 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 QV LVLDEAD ++ G+ D + + ++ Q ++ +AT+ ++K++ Sbjct 333 KQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPV-IEKIAAG 391 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 M P + + E + VV + D+ Sbjct 392 YMQKPVYATIGVETGSEPLIQQVVEYADNDEDKF-------------------------- 425 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 ++ I IIF K D L + F +K Sbjct 426 --------------KKLKPIVAKYDPPIIIFINYKQTADWLAEKF--------QKETNMK 463 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 LHG + +R+ +L+ F+ V+ +I T+VAARG+DI V V+N + + +Y+H Sbjct 464 VTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIH 523 Query 602 RIGRVGRAERMGLAISLVA-TEKEKVWYHVCS-SRGKGCYNTRLKEDGGCTIWYNEMQLL 659 RIGR GRA G A+S V+ E E + + R N+ + + + QL Sbjct 524 RIGRTGRAANEGTAVSFVSAAEDESLIRELYKYVRKHDPLNSNIFSEAVKNKYNVGKQLS 583 Query 660 SEI 662 +EI Sbjct 584 NEI 586 Score = 80.9 bits (198), Expect = 1e-14, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 42/109 (39%), Gaps = 5/109 (5%) Query 1 MAAFSEMGVMPE-IAQAV-EEMDWLLPTDIQAESIPLIL---GGGDVLMAAETGSGKTGA 55 + + E+ ++P + + + +E+ + PT IQ +IP + D L A TGSGKT A Sbjct 171 LRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLA 230 Query 56 FSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 F IP++ + + K + + Sbjct 231 FVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQKVTK 279 >sp|Q5ANB2|DBP10_CANAL ATP-dependent RNA helicase DBP10 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP10 PE=3 SV=1 Length=908 Score = 292 bits (747), Expect = 2e-85, Method: Composition-based stats. Identities = 104/457 (23%), Positives = 175/457 (38%), Gaps = 45/457 (10%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 GL I ++ + ++ + V +++ G Sbjct 101 FASFGLTKFILANIAKKGYKQPTPIQRKTIPL--------IMEGRDVVGMARTGSGKTAA 152 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ + P +A+I+ PSRELA QT +K+F L+ +++IGG + Sbjct 153 FVLPLIERLKSRQ--PGGVRAVILSPSRELALQTYKQVKEFSH---GTNLQSIVLIGGDS 207 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 + S + DI+V TPGR L + +L V+++V DEAD L G+++ +N + Sbjct 208 LEEDFSKMMTKPDIIVCTPGRFLHLKVEMQYDLMTVQYIVFDEADRLFEMGFAEQLNELL 267 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH--HVVV 446 +P Q ++ SATL V ++ + P V L E + D + + Sbjct 268 ASLP------SNRQSLLFSATLPRSLV-DFAKAGLTNPVLVRLDAESKISDQLQMAYFTT 320 Query 447 PVNPKTDRLW--------------ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 N + L E++ K D+ + + Sbjct 321 KKNEREANLLYILQEVIKMPLGSEEQIKKLKDMDKRKIDSDSEDDDDDEERKKGKKRYKF 380 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K E A + I+F TK + + + G + ++G H Sbjct 381 KKERLPPANRLPSPHSTIVFVPTKHHVEYVTKLLRDAG---------YLVSYIYGTLDQH 431 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 RK L +F+ G L+ TDVAARGIDI + VIN TLP + ++HR+GR RA Sbjct 432 ARKNQLYQFRVGLTNVLVVTDVAARGIDIPVLANVINFTLPASSKIFIHRVGRTARAGNK 491 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGC 649 G A S+V ++ + GK T + E Sbjct 492 GWAYSIVNEKELPYLLDLELFLGKKILLTSMHEAKVE 528 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 8/105 (8%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G+ I + + + PT IQ ++IPLI+ G DV+ A TGSGKT AF +P+I Sbjct 100 SFASFGLTKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLI- 158 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 E LK +Q G S + + Y + F+ G++ Sbjct 159 ---ERLKSRQPG----GVRAVILSPSRELALQTYKQVKEFSHGTN 196 >sp|A7TK55|IF4A_VANPO ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=TIF1 PE=3 SV=1 Length=396 Score = 278 bits (711), Expect = 2e-85, Method: Composition-based stats. Identities = 109/428 (25%), Positives = 181/428 (42%), Gaps = 76/428 (18%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ--------V 277 F LK+ LK + +G EE + + + + ++ SG + + Sbjct 25 FDDMNLKDELLKGVYGYGFEEPSAIQQRAILPI--VEEHDVLAQAQSGTGKTGTFSIAAL 82 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + AP+ALI+ P+RELA Q + ++D ++ IGG + + L+ Sbjct 83 QRIDSSIKAPQALILAPTRELALQIQKVVIALAFHMD---VKVHACIGGTSFVEDTEGLK 139 Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 + IVVGTPGR+ D + + ++ +LDEAD +LS G+ + I ++ +P T Sbjct 140 D-AQIVVGTPGRVSDNIQRHRFKTDNIKMFILDEADEMLSSGFREQIYQIFTMLPPTT-- 196 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 QV++ SATL DV +++ K M P + +K ++ + + + V + Sbjct 197 ----QVVLLSATLP-GDVLEVTTKFMRNPIRILVKKDELTLEGIKQFYINVEEEQ----- 246 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K + + QA+IFC T+ Sbjct 247 ----------------------------------YKFDCLSDLYDSISVTQAVIFCNTRR 272 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + L Q + F+ ++ D ER ++ F+ G R LI TD+ AR Sbjct 273 KVEELTQKLTE---------SNFTVSSIYSDLPQQERDVIMKEFRSGSSRILISTDLLAR 323 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 GID+ V VIN LP K+NY+HRIGR GR R G+AI+ V E + Sbjct 324 GIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMREIEK----- 378 Query 638 CYNTRLKE 645 Y+T+++E Sbjct 379 FYSTQIEE 386 Score = 91.0 bits (224), Expect = 3e-18, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 1/129 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + E+ + V + P+ IQ +I I+ DVL A++G+GKTG FSI +Q Sbjct 25 FDDMNLKDELLKGVYGYGFEEPSAIQQRAILPIVEEHDVLAQAQSGTGKTGTFSIAALQR 84 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREVKEWHGC 122 + ++K Q T + + A IG + +K+ Sbjct 85 IDSSIKAPQALILAPTRELALQIQKVVIALAFHMDVKVHACIGGTSFVEDTEGLKDAQIV 144 Query 123 RATKGLMKG 131 T G + Sbjct 145 VGTPGRVSD 153 >sp|Q25225|IF4A_LEIBR Probable eukaryotic initiation factor 4A OS=Leishmania braziliensis OX=5660 GN=LbrM01_V2.0740 PE=3 SV=2 Length=403 Score = 278 bits (711), Expect = 2e-85, Method: Composition-based stats. Identities = 112/444 (25%), Positives = 194/444 (44%), Gaps = 69/444 (16%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIV 267 +D + P ++ F L L+ +++G E+ + ++ D Sbjct 10 QDQDSFLDDQPGVRPIPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQ 69 Query 268 KSQHSGNA------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 +G + + F N + L++ P+RELA QT I + +++ N Sbjct 70 AQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSAKFCE 129 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 +GG +D L L+ GV + VGTPGR+ D++ G L +R LVLDEAD +LSQG++ Sbjct 130 TFVGGTRVQDDLRKLQAGVVVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFA 189 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 D I + +P K +QV + SAT+ +V +L++K M P + +K E + + Sbjct 190 DQIYEIFRFLP------KDIQVALFSATMP-EEVLELTKKFMRDPVRILVKRESLTLEGI 242 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V + K + + Sbjct 243 KQFFIAVEEEH----------------------------------------KLDTLMDLY 262 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + + Q++IF T+ D + + Q + +H + +R++ + F Sbjct 263 ETVSIAQSVIFANTRRKVDWIAEKLNQ---------SNHTVSSMHAEMPKSDRERVMNTF 313 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + G R L+ TD+ ARGID+H V VIN LP K+NY+HRIGR GR R G+AI+ V Sbjct 314 RSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTE 373 Query 622 EKEKVWYHVCSSRGKGCYNTRLKE 645 + ++ + + +G Y+T++ E Sbjct 374 KDVELLHEI-----EGHYHTQIDE 392 Score = 87.5 bits (215), Expect = 6e-17, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (43%), Gaps = 9/103 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +Q + Q S + + + S Sbjct 85 LQRLDFRHNLIQ---------GLVLSPTRELALQTAEVISRIG 118 >sp|A5AA68|DBP8_ASPNC ATP-dependent RNA helicase dbp8 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp8 PE=3 SV=1 Length=522 Score = 282 bits (721), Expect = 3e-85, Method: Composition-based stats. Identities = 108/496 (22%), Positives = 179/496 (36%), Gaps = 82/496 (17%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 + ++ F+ L +A + + A+ ++ A + Sbjct 85 IGLNDAQNSFAS----LNVAPWLIGSLTTMAVRKPTAIQKACIPEILN--------GRDC 132 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 + S+ G + + + P L++ P+RELA Q IK Sbjct 133 IGGSRTGSGKTIAFSV---PMLQKWAEDPFGIFGLVLTPTRELALQIYEQIKAISA---P 186 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDE 371 ++ LLI GG R Q L +V+ TPGRL D ++T + L +VR +VLDE Sbjct 187 QSMKPLLITGGTDMRPQAVALAQRPHVVIATPGRLADHINTSGSDTIRGLKRVRMVVLDE 246 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP----- 426 AD LL+ G+ + + + + + Q ++ +ATL +V+ L K M P Sbjct 247 ADRLLAPGHGSMLPDVETCLSALPPSSE-RQTLLFTATLTP-EVRAL--KSMPRPSTKPP 302 Query 427 ---TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 T + + S+P T+ + V Sbjct 303 IFVTEISTENNASIPPTLKQTYLKVP---------------------------------- 328 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 + + + + + AIIFC D LE+ + Sbjct 329 ----MTHREAFLHVLLSTEANASKPAIIFCNHTKTADLLERMLRRL---------SHRVT 375 Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 LH ER NL RF+ R L+ TDVA+RG+DI V V+N +P +YVHR+ Sbjct 376 SLHSLLPQSERNANLARFRASAARLLVATDVASRGLDIPSVELVVNFDVPRNPDDYVHRV 435 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE 663 GR RA R G +++LV + + G+ +E +L E+ Sbjct 436 GRTARAGRKGESVTLVGQRDVSLVLAIEERVGRQMEEWS-EEGVSVEGRVVRTGVLKEVG 494 Query 664 EHLNCTISQVEPDIKV 679 E ++E V Sbjct 495 EAKREAAGEIEEGRDV 510 Score = 99.0 bits (245), Expect = 2e-20, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 62/156 (40%), Gaps = 20/156 (13%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AFS+P++Q Sbjct 93 SFASLNVAPWLIGSLTTMAVRKPTAIQKACIPEILNGRDCIGGSRTGSGKTIAFSVPMLQ 152 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLCCQ 112 E + + + Y++ A + G + Q Sbjct 153 KWAE---------DPFGIFGLVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRPQ 203 Query 113 SREV-KEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 + + + H AT G + S +GL RV Sbjct 204 AVALAQRPHVVIATPGRLADHINTSGSDTIRGLKRV 239 >sp|P10081|IF4A_YEAST ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TIF1 PE=1 SV=3 Length=395 Score = 278 bits (711), Expect = 3e-85, Method: Composition-based stats. Identities = 108/426 (25%), Positives = 179/426 (42%), Gaps = 72/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F L L+ F +G EE + + + + D +G A + + Sbjct 24 FDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQR 83 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 AP+AL++ P+RELA Q + ++D ++ IGG + + L + Sbjct 84 IDTSVKAPQALMLAPTRELALQIQKVVMALAFHMD---IKVHACIGGTSFVEDAEGLRD- 139 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVVGTPGR+ D + + +++ +LDEAD +LS G+ + I ++ +P T Sbjct 140 AQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTT---- 195 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ + DV +++ K M P + +K ++ + + V V + Sbjct 196 --QVVLLSATMPN-DVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEE------- 245 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 K E + QA+IFC T+ Sbjct 246 --------------------------------YKYECLTDLYDSISVTQAVIFCNTRRKV 273 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + +F+ ++ D ER ++ F+ G R LI TD+ ARGI Sbjct 274 EELTTKL---------RNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGI 324 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP K+NY+HRIGR GR R G+AI+ V E + Y Sbjct 325 DVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEK-----FY 379 Query 640 NTRLKE 645 +T+++E Sbjct 380 STQIEE 385 Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + V + P+ IQ +I I+ G DVL A++G+GKTG FSI +Q Sbjct 24 FDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQR 83 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----IGSDGLCCQSREVKEW 119 + ++K Q + + + A A I + V++ Sbjct 84 IDTSVKAPQ---------ALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDA 134 Query 120 HGCR 123 G R Sbjct 135 EGLR 138 >sp|A6ZQJ1|IF4A_YEAS7 ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=TIF1 PE=3 SV=1 Length=395 Score = 278 bits (711), Expect = 3e-85, Method: Composition-based stats. Identities = 108/426 (25%), Positives = 179/426 (42%), Gaps = 72/426 (17%) Query 228 FPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQ 279 F L L+ F +G EE + + + + D +G A + + Sbjct 24 FDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQR 83 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 AP+AL++ P+RELA Q + ++D ++ IGG + + L + Sbjct 84 IDTSVKAPQALMLAPTRELALQIQKVVMALAFHMD---IKVHACIGGTSFVEDAEGLRD- 139 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVVGTPGR+ D + + +++ +LDEAD +LS G+ + I ++ +P T Sbjct 140 AQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTT---- 195 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 QV++ SAT+ + DV +++ K M P + +K ++ + + V V + Sbjct 196 --QVVLLSATMPN-DVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEE------- 245 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 K E + QA+IFC T+ Sbjct 246 --------------------------------YKYECLTDLYDSISVTQAVIFCNTRRKV 273 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + L + +F+ ++ D ER ++ F+ G R LI TD+ ARGI Sbjct 274 EELTTKL---------RNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGI 324 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ V VIN LP K+NY+HRIGR GR R G+AI+ V E + Y Sbjct 325 DVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEK-----FY 379 Query 640 NTRLKE 645 +T+++E Sbjct 380 STQIEE 385 Score = 89.4 bits (220), Expect = 1e-17, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +M + + + V + P+ IQ +I I+ G DVL A++G+GKTG FSI +Q Sbjct 24 FDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQR 83 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----IGSDGLCCQSREVKEW 119 + ++K Q + + + A A I + V++ Sbjct 84 IDTSVKAPQ---------ALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDA 134 Query 120 HGCR 123 G R Sbjct 135 EGLR 138 >sp|Q9PA24|RHLB_XYLFA ATP-dependent RNA helicase RhlB OS=Xylella fastidiosa (strain 9a5c) OX=160492 GN=rhlB PE=3 SV=2 Length=543 Score = 283 bits (723), Expect = 3e-85, Method: Composition-based stats. Identities = 103/431 (24%), Positives = 163/431 (38%), Gaps = 70/431 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 N L L + + ++ L ++ G Sbjct 9 LNFSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALA--------GRDIAGQAQTGTGKT 60 Query 267 VKSQHSGNAQVTQTKFL----PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 + ++ L P P+ALI+ P+RELA Q N+ +F N LR L Sbjct 61 LAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFG---GNLGLRFAL 117 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYS 381 I GGV Q +L G D+V+ TPGRL D + + ++L VLDEAD + G+ Sbjct 118 IYGGVDYDKQREMLRKGADVVIATPGRLIDYLKQHEVVSLRVCEICVLDEADRMFDLGFI 177 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I + ++P+ S Q ++ SATL S V +L+ + M+ P + + E V Sbjct 178 KDIRFILRRLPERCS----RQTLLFSATL-SHRVLELAYEYMNEPEKLVAETETVTTTRV 232 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + + K + + Sbjct 233 RQRIYFPAEEE----------------------------------------KIPLLLGLL 252 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + + ++F TK+ + + + + G + L GD +R+ L RF Sbjct 253 SRSEGMRTMVFVNTKVFVEGVARALDEAG---------YRVGVLSGDVPQRKRETLLNRF 303 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 +KG + L+ TDVAARG+ I GV YV N LP + ++YVHRIGR R G AIS Sbjct 304 QKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTARLGADGDAISFACE 363 Query 622 EKEKVWYHVCS 632 + + Sbjct 364 RYAMSLPDIEA 374 Score = 99.0 bits (245), Expect = 3e-20, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 14/155 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P + + + L T IQA ++P+ L G D+ A+TG+GKT AF + V+ Sbjct 11 FSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNR 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDR--------GSAFAIGSDGLCCQSRE 115 + + + + + + Y+ G FA+ G+ + Sbjct 71 LLSRPGLVNRNPEDPRAL--ILAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQR 128 Query 116 ---VKEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 K AT G + + + +C + Sbjct 129 EMLRKGADVVIATPGRLID-YLKQHEVVSLRVCEI 162 >sp|O62591|IF4A_LEIMA Probable eukaryotic initiation factor 4A OS=Leishmania major OX=5664 GN=LmjF.01.0770 PE=3 SV=1 Length=403 Score = 278 bits (711), Expect = 3e-85, Method: Composition-based stats. Identities = 111/444 (25%), Positives = 193/444 (43%), Gaps = 69/444 (16%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIV 267 +D + P ++ F L L+ +++G E+ + ++ D Sbjct 10 QDQDSFLDDQPGVRPIPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQ 69 Query 268 KSQHSGNA------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 +G + + F N + L++ P+RELA QT I + +++ N Sbjct 70 AQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCE 129 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 +GG +D L L+ GV + VGTPGR+ D++ G L +R LVLDEAD +LSQG++ Sbjct 130 TFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFA 189 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 D I + +P K +QV + SAT+ +V +L++K M P + +K E + + Sbjct 190 DQIYEIFRFLP------KDIQVALFSATMP-EEVLELTKKFMRDPVRILVKRESLTLEGI 242 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V + K + + Sbjct 243 KQFFIAVEEEH----------------------------------------KLDTLMDLY 262 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + + Q++IF T+ D + + Q + +H + +R++ + F Sbjct 263 ETVSIAQSVIFANTRRKVDWIAEKLNQ---------SNHTVSSMHAEMPKSDRERVMNTF 313 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + G R L+ TD+ ARGID+H V VIN LP K+NY+HRIGR GR R G+AI+ V Sbjct 314 RSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTE 373 Query 622 EKEKVWYHVCSSRGKGCYNTRLKE 645 + ++ + + + Y+T++ E Sbjct 374 KDVELLHEIEAH-----YHTQIDE 392 Score = 87.5 bits (215), Expect = 5e-17, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (43%), Gaps = 9/103 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +Q + Q S + + + S Sbjct 85 LQRLDFRHNLIQ---------GLVLSPTRELALQTAEVISRIG 118 >sp|A4HRK0|IF4A_LEIIN Probable eukaryotic initiation factor 4A OS=Leishmania infantum OX=5671 GN=LinJ01.0780 PE=3 SV=1 Length=403 Score = 278 bits (711), Expect = 3e-85, Method: Composition-based stats. Identities = 111/444 (25%), Positives = 193/444 (43%), Gaps = 69/444 (16%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIV 267 +D + P ++ F L L+ +++G E+ + ++ D Sbjct 10 QDQDSFLDDQPGVRPIPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQ 69 Query 268 KSQHSGNA------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 +G + + F N + L++ P+RELA QT I + +++ N Sbjct 70 AQSGTGKTGAFSIGLLQRLDFRHNLIQGLVLSPTRELALQTAEVISRIGEFLSNSSKFCE 129 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 +GG +D L L+ GV + VGTPGR+ D++ G L +R LVLDEAD +LSQG++ Sbjct 130 TFVGGTRVQDDLRKLQAGVIVAVGTPGRVSDVIKRGALRTESLRVLVLDEADEMLSQGFA 189 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 D I + +P K +QV + SAT+ +V +L++K M P + +K E + + Sbjct 190 DQIYEIFRFLP------KDIQVALFSATMP-EEVLELTKKFMRDPVRILVKRESLTLEGI 242 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V + K + + Sbjct 243 KQFFIAVEEEH----------------------------------------KLDTLMDLY 262 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + + Q++IF T+ D + + Q + +H + +R++ + F Sbjct 263 ETVSIAQSVIFANTRRKVDWIAEKLNQ---------SNHTVSSMHAEMPKSDRERVMNTF 313 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + G R L+ TD+ ARGID+H V VIN LP K+NY+HRIGR GR R G+AI+ V Sbjct 314 RSGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTE 373 Query 622 EKEKVWYHVCSSRGKGCYNTRLKE 645 + ++ + + + Y+T++ E Sbjct 374 KDVELLHEIEAH-----YHTQIDE 392 Score = 87.5 bits (215), Expect = 5e-17, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 44/103 (43%), Gaps = 9/103 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSYGFEKPSSIQQRAIAPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +Q + Q S + + + S Sbjct 85 LQRLDFRHNLIQ---------GLVLSPTRELALQTAEVISRIG 118 >sp|Q9HGM5|DBP8_SCHPO ATP-dependent RNA helicase dbp8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp8 PE=3 SV=1 Length=453 Score = 280 bits (715), Expect = 3e-85, Method: Composition-based stats. Identities = 111/505 (22%), Positives = 194/505 (38%), Gaps = 81/505 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ DLG++ + +K A++ ++ + + +K G Sbjct 7 KSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQIL--------EGRNCIGGAKTGSGKT 58 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + ++ P+ ALI+ P+RELA Q +QF N L+ LI+GG Sbjct 59 AAFALPIIEKWSKD---PSGIFALILTPTRELAIQID---EQFAALGANLNLKHALIVGG 112 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGK----LNLSQVRFLVLDEADGLLSQGYSD 382 + Q L +VV TPGRL DL+ + L +++FLV+DEAD LLS ++D Sbjct 113 MDMIRQSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMDEADRLLSPTFAD 172 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF---PTWVDLKGED--SV 437 ++ + +P + Q ++ +AT+ +++L + P W+ D SV Sbjct 173 DLDDCFSVLPA----SEDRQTLLFTATVTDA-IRQLKYQPQKNNKPPLWLYEVETDNISV 227 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 P T+ + V+ + + Sbjct 228 PSTLQQSYIFVSSQVREAY--------------------------------------LVH 249 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 + I E+ AIIF + + + LH + ER + Sbjct 250 LLTIPENAKKSAIIFVNRTRTAELIYSILRLL---------ELRVTELHSEMVQRERINS 300 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 L RF+ + L+ TDVA+RG+DI V VIN LP + +Y+HR+GR RA R G +IS Sbjct 301 LGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESIS 360 Query 618 LVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM-----QLLSEIEEHLNCTISQ 672 +V + + + G + + E+ Q E+ + Q Sbjct 361 IVTERDVDLVHAIEDRVGTKLSEYEHVSENKMLEYIKEVTDAKRQASLEMIDRGFGERRQ 420 Query 673 VEPDIKVPVDEFDGKVT-YGQKRAA 696 + ++ + K+ G+K+ A Sbjct 421 KRNEKRLMANGISNKLKNSGRKKKA 445 Score = 98.7 bits (244), Expect = 2e-20, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 20/157 (13%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS++G+ P + ++ + PTDIQ I IL G + + A+TGSGKT AF++P+I Sbjct 7 KSFSDLGISPWLIDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPII 66 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG---SDGLCCQSREV-- 116 + K + + + ++ +A L ++ Sbjct 67 EKW---------SKDPSGIFALILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIR 117 Query 117 ------KEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 K H AT G + GL R+ Sbjct 118 QSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRI 154 >sp|A5DLE0|DBP8_PICGU ATP-dependent RNA helicase DBP8 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP8 PE=3 SV=2 Length=433 Score = 279 bits (713), Expect = 3e-85, Method: Composition-based stats. Identities = 103/492 (21%), Positives = 190/492 (39%), Gaps = 68/492 (14%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 KDLG++ + + + ++ + G + A G K Sbjct 3 FKDLGVSKWLLEALAAMKIRSPTSIQAECIP----------QILAGRDCIGGAKTG-SGK 51 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + +T+ P L++ P+RELA Q +QF + ++ +++GG Sbjct 52 TIAFAAPMMTKWSEDPFGIYGLVLTPTRELALQI---AEQFLALGASMNIKVAVVVGGED 108 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFI 384 Q ++ ++ TPGRL D + + L +++FLVLDEAD LLS + + Sbjct 109 MVKQALEIQKSPHFIIATPGRLADHILNSGDDTVGGLKRIKFLVLDEADRLLSNSFGSDL 168 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 R +P D + Q ++ +AT+ V+ L +K P E P +H + Sbjct 169 ERCFKILP----DASKRQTLLFTATVTDA-VRALKDK----PV-----PEGKKPVFIHEI 214 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + + L S++ + SP ++ Sbjct 215 V---SKDQVAIPATLTISYVFVPSYVKEAYLHNILVSP--------------------KY 251 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + AI+F + L + + LH + ER +L RF+ G Sbjct 252 EKASAIVFVNRTYTAEILRRTLRKL---------DIRVASLHSEMPQSERTNSLHRFRAG 302 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 R LI TDVA+RG+DI V V+N +P + +Y+HR+GR RA + G ++S+V+ + Sbjct 303 AARVLIATDVASRGLDIPNVELVVNQDIPADPDDYIHRVGRTARAGKKGGSVSIVSEKDV 362 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS--EIEEHLNCTISQVEPDIKVPVD 682 + + + K L+E I + +++ + E + K+ Sbjct 363 ERILAIENHINKKMDL--LEEVNDDKIIKESLSIVTAAKRESVADMEKEGFGEKRKINKR 420 Query 683 EFDGKVTYGQKR 694 + + + +KR Sbjct 421 KREERTRDSKKR 432 Score = 103 bits (257), Expect = 3e-22, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 69/182 (38%), Gaps = 24/182 (13%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++GV + +A+ M PT IQAE IP IL G D + A+TGSGKT AF+ P++ Sbjct 2 SFKDLGVSKWLLEALAAMKIRSPTSIQAECIPQILAGRDCIGGAKTGSGKTIAFAAPMMT 61 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLCCQ 112 E + + + ++ A +G + + Q Sbjct 62 KWSE---------DPFGIYGLVLTPTRELALQIAEQFLALGASMNIKVAVVVGGEDMVKQ 112 Query 113 SREV-KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGW-STMQASLDLGTDKFGFGFGGT 170 + E+ K H AT G + GL R+ + +A L FG Sbjct 113 ALEIQKSPHFIIATPGRLADHILNSGDDTVGGLKRIKFLVLDEADRLL---SNSFGSDLE 169 Query 171 GK 172 Sbjct 170 RC 171 >sp|P20449|DBP5_YEAST ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP5 PE=1 SV=2 Length=482 Score = 280 bits (717), Expect = 3e-85, Method: Composition-based stats. Identities = 108/470 (23%), Positives = 187/470 (40%), Gaps = 78/470 (17%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + +K+ +LGLA E+ + ++ L +A Sbjct 84 PNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPP------RNMIAQ 137 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S++ G + +T+ +P+A+ + PSRELA QTL +++ K+ K+ Sbjct 138 SQSGTGKTAAFSLT---MLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKF---TKI 191 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS- 377 LI+ +++ + ++VGTPG + DL+ + L +++ VLDEAD +L Sbjct 192 TSQLIVPDSFEKNK----QINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQ 247 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 QG D R+ +P K Q+++ SAT V++ ++KI+ ++L+ + Sbjct 248 QGLGDQCIRVKRFLP------KDTQLVLFSATFADA-VRQYAKKIVPNANTLELQTNEVN 300 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 D + + + + D+ +L Y Sbjct 301 VDAIKQLYMDCKNEADKF----------------------------------DVLTELYG 326 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 + I +IIF TK + L +G LHGD + ER + Sbjct 327 LMTI-----GSSIIFVATKKTANVLYGKLKSEG---------HEVSILHGDLQTQERDRL 372 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHRIGRVGRAER 611 ++ F++G + LI T+V ARGIDI V V+N LP + Y+HRIGR GR R Sbjct 373 IDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGR 432 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 G+AIS V + TR+ D + ++L + Sbjct 433 KGVAISFVHDKNSFNILSAIQKYFGDIEMTRVPTDDWDEVEKIVKKVLKD 482 Score = 85.2 bits (209), Expect = 5e-16, Method: Composition-based stats. Identities = 21/73 (29%), Positives = 42/73 (58%), Gaps = 2/73 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIP 59 +F E+G+ PE+ + + M + P+ IQ ++PL+L +++ +++G+GKT AFS+ Sbjct 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151 Query 60 VIQIVYETLKDQQ 72 ++ V Q Sbjct 152 MLTRVNPEDASPQ 164 >sp|A6ZNQ1|DBP5_YEAS7 ATP-dependent RNA helicase DBP5 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP5 PE=3 SV=1 Length=482 Score = 280 bits (717), Expect = 3e-85, Method: Composition-based stats. Identities = 108/470 (23%), Positives = 187/470 (40%), Gaps = 78/470 (17%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + +K+ +LGLA E+ + ++ L +A Sbjct 84 PNSPLYSAKSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPP------RNMIAQ 137 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S++ G + +T+ +P+A+ + PSRELA QTL +++ K+ K+ Sbjct 138 SQSGTGKTAAFSLT---MLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKF---TKI 191 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS- 377 LI+ +++ + ++VGTPG + DL+ + L +++ VLDEAD +L Sbjct 192 TSQLIVPDSFEKNK----QINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQ 247 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 QG D R+ +P K Q+++ SAT V++ ++KI+ ++L+ + Sbjct 248 QGLGDQCIRVKRFLP------KDTQLVLFSATFADA-VRQYAKKIVPNANTLELQTNEVN 300 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 D + + + + D+ +L Y Sbjct 301 VDAIKQLYMDCKNEADKF----------------------------------DVLTELYG 326 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 + I +IIF TK + L +G LHGD + ER + Sbjct 327 LMTI-----GSSIIFVATKKTANVLYGKLKSEG---------HEVSILHGDLQTQERDRL 372 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHRIGRVGRAER 611 ++ F++G + LI T+V ARGIDI V V+N LP + Y+HRIGR GR R Sbjct 373 IDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGR 432 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 G+AIS V + TR+ D + ++L + Sbjct 433 KGVAISFVHDKNSFNILSAIQKYFGDIEMTRVPTDDWDEVEKIVKKVLKD 482 Score = 85.2 bits (209), Expect = 5e-16, Method: Composition-based stats. Identities = 21/73 (29%), Positives = 42/73 (58%), Gaps = 2/73 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIP 59 +F E+G+ PE+ + + M + P+ IQ ++PL+L +++ +++G+GKT AFS+ Sbjct 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151 Query 60 VIQIVYETLKDQQ 72 ++ V Q Sbjct 152 MLTRVNPEDASPQ 164 >sp|Q9V3C0|DDX41_DROME ATP-dependent RNA helicase abstrakt OS=Drosophila melanogaster OX=7227 GN=abs PE=1 SV=1 Length=619 Score = 285 bits (728), Expect = 4e-85, Method: Composition-based stats. Identities = 93/360 (26%), Positives = 159/360 (44%), Gaps = 61/360 (17%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKY---IDNPKLRELLIIGGVAARDQLSVLENGVDI 342 P LI+ PSRELA+QT I+ + K+ P++R L +GG+ + L V+ GV I Sbjct 253 GPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHI 312 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 VV TPGRL D++ L L R+L +DEAD ++ G+ + + + + + Q Sbjct 313 VVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFF------KGQRQ 366 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SAT+ ++ + + P +++ + V V V + Sbjct 367 TLLFSATMPK-KIQNFARSALVKPVTINVGRAGAASMNVTQQVEYVKQEA---------- 415 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 K Y + +++ +IF K D D + Sbjct 416 ------------------------------KVVYLLDCLQKTAP-PVLIFAEKKQDVDCI 444 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 +Y + +G V +HG + ER + ++ ++ G L+ TDVA++G+D Sbjct 445 HEYLLLKG---------VEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFP 495 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA-TEKEKVWYHVCSSRGKGCYNT 641 V +VIN +PD+ +NYVHRIGR GR+ GLA +L+ T ++ V + +G Sbjct 496 NVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQSVLLDLKHLLIEGKQEV 555 Score = 95.6 bits (236), Expect = 4e-19, Method: Composition-based stats. Identities = 24/110 (22%), Positives = 41/110 (37%), Gaps = 1/110 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F EM I + PT IQ + +P +L G D++ A TGSGKT F +PV Sbjct 176 IRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPV 235 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 I E ++ + + ++ ++ Sbjct 236 IMFALEQEYSL-PFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACG 284 >sp|Q4WXW1|DBP8_ASPFU ATP-dependent RNA helicase dbp8 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp8 PE=3 SV=1 Length=526 Score = 282 bits (721), Expect = 4e-85, Method: Composition-based stats. Identities = 104/478 (22%), Positives = 178/478 (37%), Gaps = 74/478 (15%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L +A + + A+ ++ A + + + S+ G + Sbjct 101 LNVAPWLVGSLTTMAVRKPTAIQKACIP--------EILKGRDCIGGSRTGSGKTIAFSV 152 Query 272 SGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 + + P +++ P+RELA Q IK ++ +LI GG R Sbjct 153 ---PMLQKWAEDPFGIFGVVLTPTRELALQIFEQIKAISA---PQSMKPVLITGGTDMRP 206 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRM 387 Q L +V+ TPGRL D + + + L +VR +VLDEAD LL+ G + + Sbjct 207 QAIALAGRPHVVIATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADRLLASGPGSMLPDV 266 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKL------SEKIMHFPTWVDLKGEDSVPDTV 441 + + + Q ++ +AT+ +V+ L + K F T + + + ++P T+ Sbjct 267 ETCLSALPPSSE-RQTLLFTATVTP-EVRALKNMPRSANKPPVFVTEISTENQGTIPPTL 324 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V L R H+ + + Sbjct 325 KQTYLKVP-----LTHREAFLHV---------------------------------LLST 346 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + + AI+FC D LE+ + LH ER NL RF Sbjct 347 EGNASKPAIVFCNHTKTADLLERMLRRL---------SHRVTSLHSLLPQSERNANLARF 397 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + R L+ TDVA+RG+DI V VIN +P +YVHR+GR RA R G A++LV Sbjct 398 RASAARILVATDVASRGLDIPTVSLVINYDVPRNPDDYVHRVGRTARAGRRGEAVTLVGQ 457 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 ++ + G+ +E L E+ E + +++ V Sbjct 458 RDVQLVLAIEERVGRQMEEWS-EEGVSIEGRLVRTGALKEVGEAKREAMVEIDEGRDV 514 Score = 98.3 bits (243), Expect = 4e-20, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 46/103 (45%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AFS+P++ Sbjct 96 SSFAALNVAPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPML 155 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q E + + + +++ A + Sbjct 156 QKWAE---------DPFGIFGVVLTPTRELALQIFEQIKAISA 189 >sp|Q4I662|DBP8_GIBZE ATP-dependent RNA helicase DBP8 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP8 PE=3 SV=1 Length=547 Score = 282 bits (722), Expect = 4e-85, Method: Composition-based stats. Identities = 111/463 (24%), Positives = 172/463 (37%), Gaps = 69/463 (15%) Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL------PNAPKALIVEP 294 N + K + K D SG L P A A+++ P Sbjct 133 NMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMAFAVPILQKWSEDPTAIFAVVLTP 192 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV 354 +RELA Q +QFK L+ +L+ GG R Q + +++ TPGRL D + Sbjct 193 TRELALQIF---EQFKAISSPQSLKAILVTGGSDMRTQAIEIGKRPHVIIATPGRLADHI 249 Query 355 STGKLN----LSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT 409 T + L +VR++VLDEAD LL+ G + + + + + Q ++ +AT Sbjct 250 RTSGEDTICGLRRVRYVVLDEADRLLNATGPGSMLPDVEECLSVLPPATE-RQTLLFTAT 308 Query 410 LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 + P LK P V V+ +T + L + +I+ Sbjct 309 IT--------------PEVRALKDMPIKPGKQPVFVCEVDTQTLAIPATLKQMYIKVPVT 354 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII-FCRTKIDCDNLEQYFIQ 528 H + + E +D+ +I FC D L Sbjct 355 HKEHYLH---------------------TFLLTEANVDKTVILFCNRTSTADYLHHLLRM 393 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 + LH +R NL RF+ R L+ TDVAARG+DI V VI Sbjct 394 L---------EHRVTSLHSKLPQRQRIDNLARFRASAARILVATDVAARGLDIPEVSLVI 444 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY--------- 639 N LP + +Y+HR+GR RA R G A+S V ++ + G+ Sbjct 445 NYDLPRDPDDYIHRVGRTARAGRKGEAVSFVGQRDVELALTIEKRVGRDMEAWEEEGVNL 504 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 TR+ D + + + L E+EE + K+ VD Sbjct 505 ETRVVRDALKLVSEKKREALLEVEEGREVGGKRKRTKQKLRVD 547 Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 20/141 (14%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS + V P + Q++E M PT IQ IP IL G D + + TGSGKT AF++P++ Sbjct 116 TTFSALDVRPWLVQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMAFAVPIL 175 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLCC 111 Q E + + + +++ A + G + Sbjct 176 QKWSE---------DPTAIFAVVLTPTRELALQIFEQFKAISSPQSLKAILVTGGSDMRT 226 Query 112 QSREV-KEWHGCRATKGLMKG 131 Q+ E+ K H AT G + Sbjct 227 QAIEIGKRPHVIIATPGRLAD 247 >sp|Q6FQZ0|DBP8_CANGA ATP-dependent RNA helicase DBP8 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP8 PE=3 SV=1 Length=437 Score = 279 bits (713), Expect = 4e-85, Method: Composition-based stats. Identities = 97/483 (20%), Positives = 177/483 (37%), Gaps = 73/483 (15%) Query 200 KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 V +N + LGL+ + + + +++ + + + + Sbjct 2 TEEVSRKQNFRQLGLSKWLVESLDAMRIRTPTAIQSGCIP--------EILKGRDCIGGA 53 Query 260 KAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 K G + +TQ P +++ P+RELA Q Y++ +R Sbjct 54 KTGSGKTIAF---AGPMLTQWSEDPTGMFGIVLTPTRELAMQIAEQFTALGSYMN---IR 107 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGL 375 L++GG + DQ L+ ++ TPGRL + + L +V++LVLDEAD L Sbjct 108 VALVVGGESIVDQALQLQRKPHFIIATPGRLAHHILNSGDDTVGGLKRVKYLVLDEADIL 167 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L++ +S+ + +P ++ Q ++ +AT+ V+ L + + Sbjct 168 LTETFSNDLKTCVGALP----PKEKRQTLLFTATITDQ-VRALQDAPVQK---------- 212 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 GK + +V DN + + + +K Sbjct 213 ------------------------GKQPLFCYEVENVDNVAIPSTLNTEYVLVPEHVKEA 248 Query 496 YAVRAIKEHKM--DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 Y + + AIIF + L + K LH E Sbjct 249 YLYQLLTCESYANSTAIIFVNRTTAAEVLRRTL---------KALDVRVASLHSQMPQQE 299 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R ++ RF+ R LI TDVA+RG+DI V VIN +P + ++HR GR RA R G Sbjct 300 RTNSMHRFRANAARVLIATDVASRGLDIPTVELVINYDIPSDPDTFIHRSGRTARAGRKG 359 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 AIS + + + N ++ E + L+++ + + + Sbjct 360 DAISFITQRDVSRIEAIEARI-----NMKMTECDKVHDTAVIRKALTKVSKAKREALMAM 414 Query 674 EPD 676 E + Sbjct 415 EKE 417 Score = 96.4 bits (238), Expect = 9e-20, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++G+ + ++++ M PT IQ+ IP IL G D + A+TGSGKT AF+ P++ Sbjct 11 FRQLGLSKWLVESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKTIAFAGPMLTQ 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 E + + M ++ +A + Sbjct 71 WSE---------DPTGMFGIVLTPTRELAMQIAEQFTALGSYMN 105 >sp|A6ZXP4|SUB2_YEAS7 ATP-dependent RNA helicase SUB2 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=SUB2 PE=3 SV=1 Length=446 Score = 279 bits (713), Expect = 4e-85, Method: Composition-based stats. Identities = 104/473 (22%), Positives = 177/473 (37%), Gaps = 78/473 (16%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEE 246 D G Y+ I S KD L E+ + + ++ + Sbjct 48 AAGDKKGSYVGIH------STGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIP------- 94 Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 G L +A G + K+ + + Q +P +++ +RELA Q N Sbjct 95 ---QSIHGTDVLCQAKSG-LGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEY 150 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQ 363 +F KY+ P ++ + GG +L+N IVV TPGRL LV ++LS Sbjct 151 LRFSKYM--PDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSH 208 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 V+ V+DE D +L + R +I + T K QV++ SATL S +++ + + + Sbjct 209 VKNFVIDECDKVLE---ELDMRRDVQEIFRATPRDK--QVMMFSATL-SQEIRPICRRFL 262 Query 424 HFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 P + + E + + + + Sbjct 263 QNPLEIFVDDEAKLTLHGLQQYYIKLEERE------------------------------ 292 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 K + + + + +Q IIF ++ + L + F Sbjct 293 ----------KNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLL---------NASNFPA 333 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 + +HG K ER + FK + R + TDV RGIDI + IN L +E Y+HR Sbjct 334 ITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHR 393 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE 655 +GR GR GLAIS V++++++ R +E + + N Sbjct 394 VGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFPEEGIDPSTYLNN 446 Score = 75.9 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 45/103 (44%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + + Sbjct 62 TGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTL 121 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + D G+ I + + F+ Sbjct 122 QQL-----DPVPGEVAVVVICNA----RELAYQIRNEYLRFSK 155 >sp|Q6C799|DBP8_YARLI ATP-dependent RNA helicase DBP8 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP8 PE=3 SV=1 Length=442 Score = 279 bits (713), Expect = 5e-85, Method: Composition-based stats. Identities = 114/513 (22%), Positives = 191/513 (37%), Gaps = 84/513 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + F+ DLGL + + N A+ ++ A + G + A Sbjct 1 MSFT----DLGLPEWLNESLSNMAITKPSAIQKACIP----------QIMKGKDCIGGAR 46 Query 263 DGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 G K+ + + P L++ P+RELA Q +QF N +R L Sbjct 47 TG-SGKTIAFAAPMLAEWSKDPCGIFGLVLTPTRELAIQI---AEQFTALGANMNIRVAL 102 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQ 378 I GGV Q L+ V+ TPGRL D + + + +VR++V+DEAD LL+ Sbjct 103 IYGGVDMVKQSLELQKMPHFVIATPGRLADHIRSSGEDTIRGFRRVRYVVMDEADRLLTP 162 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF--PTWVDLKGEDS 436 G+ + + +P D + Q ++ +AT+ V+ L ++ P ++ + + Sbjct 163 GFVPDLKTCMDLLP----DPSKRQTLLFTATVTDA-VRALKDRTGEKGPPFIHEIASDIA 217 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 VP T+ + + + + Sbjct 218 VPSTLTQSYLFLPGYVREAY--------------------------------------LW 239 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 A+ +++ AIIF + L + + LH + + ER Sbjct 240 AILTHPDNEKKSAIIFVNRTQTAETLRRMLMAL---------DVKTASLHSEMRQQERVN 290 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 L RF+ R L+ TDVA+RG+DI V VIN LP + +Y+HR+GR RA R G ++ Sbjct 291 ALGRFRAQAARVLVATDVASRGLDIPTVEMVINFDLPADADDYIHRVGRTARAGRKGQSV 350 Query 617 SLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY------NEMQLLSEIE-EHLNCT 669 SLV ++ G L ED Y + Q + ++E E+ Sbjct 351 SLVTERDVTRVTNIEERVGTKMEKYDLIEDDKVVEEYLTPASTAKRQAVLDMEAENFGER 410 Query 670 ISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYK 702 + VD K ++ A G K Sbjct 411 KRIQRKKAGLDVDMKS-KNKKPKRVAKGKSDKK 442 Score = 99.8 bits (247), Expect = 6e-21, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 20/156 (13%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+++G+ + +++ M P+ IQ IP I+ G D + A TGSGKT AF+ P++ Sbjct 2 SFTDLGLPEWLNESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPMLA 61 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD----------GLCCQ 112 K + + + ++ +A + + Q Sbjct 62 EW---------SKDPCGIFGLVLTPTRELAIQIAEQFTALGANMNIRVALIYGGVDMVKQ 112 Query 113 SREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRV 147 S E+++ H AT G + +G RV Sbjct 113 SLELQKMPHFVIATPGRLADHIRSSGEDTIRGFRRV 148 >sp|P44922|RHLB_HAEIN ATP-dependent RNA helicase RhlB OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rhlB PE=3 SV=2 Length=415 Score = 278 bits (710), Expect = 5e-85, Method: Composition-based stats. Identities = 100/399 (25%), Positives = 164/399 (41%), Gaps = 62/399 (16%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPN----APKALIVEPSRELAEQTLNNIKQFKKY 312 ++ G + + T PN P+ALI+ P+RELA Q N+ + K Sbjct 51 GQAQTGTGKTMAFL-TATFHHLLTHQDPNLKYPHPRALILAPTRELAVQISNDAEFLAK- 108 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ L GG QL +E GVDI++GT GR+ D V G + L +++ +VLDEA Sbjct 109 --ASGLKTALAYGGDGYDKQLQAIERGVDILIGTTGRVIDYVKQGVIGLDEIQVVVLDEA 166 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D + G+ I + + P + ++ SATL S+ V++L+ + M+ Sbjct 167 DRMFDLGFIRDIRYLLRKCPA----PQARLTMLFSATL-SYKVRELAFEDMN-------- 213 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + + + + G E Sbjct 214 --------------------------------EPEYIEIEPEQKTGHRIKEELFYPSNQD 241 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + +++ ++ I+F TK C+ + Y G L GD Sbjct 242 KMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADG---------HRVGLLTGDVAQK 292 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 +R L++F GD+ L+ TDVAARG+ I V +V N LPD++++YVHRIGR GRA Sbjct 293 KRLSLLKQFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGES 352 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 G++IS E + G ++ + + + Sbjct 353 GVSISFACEEYAMNLPAIEEYIGHSIPVSQYETEALLEL 391 Score = 92.5 bits (228), Expect = 1e-18, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 3/104 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P + A+ + + T IQA S+P+ L G DV A+TG+GKT AF Sbjct 11 FSALPLHPIVRGALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKTMAFLTATFHH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + Q K + + + + A S Sbjct 71 LLTH---QDPNLKYPHPRALILAPTRELAVQISNDAEFLAKASG 111 >sp|Q07478|SUB2_YEAST ATP-dependent RNA helicase SUB2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SUB2 PE=1 SV=1 Length=446 Score = 279 bits (713), Expect = 5e-85, Method: Composition-based stats. Identities = 104/473 (22%), Positives = 177/473 (37%), Gaps = 78/473 (16%) Query 187 TMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEE 246 D G Y+ I S KD L E+ + + ++ + Sbjct 48 AAGDKKGSYVGIH------STGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIP------- 94 Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 G L +A G + K+ + + Q +P +++ +RELA Q N Sbjct 95 ---QSIHGTDVLCQAKSG-LGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEY 150 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQ 363 +F KY+ P ++ + GG +L+N IVV TPGRL LV ++LS Sbjct 151 LRFSKYM--PDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSH 208 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 V+ V+DE D +L + R +I + T K QV++ SATL S +++ + + + Sbjct 209 VKNFVIDECDKVLE---ELDMRRDVQEIFRATPRDK--QVMMFSATL-SQEIRPICRRFL 262 Query 424 HFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 P + + E + + + + Sbjct 263 QNPLEIFVDDEAKLTLHGLQQYYIKLEERE------------------------------ 292 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 K + + + + +Q IIF ++ + L + F Sbjct 293 ----------KNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLL---------NASNFPA 333 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 + +HG K ER + FK + R + TDV RGIDI + IN L +E Y+HR Sbjct 334 ITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHR 393 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE 655 +GR GR GLAIS V++++++ R +E + + N Sbjct 394 VGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFPEEGIDPSTYLNN 446 Score = 75.9 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 23/103 (22%), Positives = 45/103 (44%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + + Sbjct 62 TGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTL 121 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + D G+ I + + F+ Sbjct 122 QQL-----DPVPGEVAVVVICNA----RELAYQIRNEYLRFSK 155 >sp|Q6BGU8|DBP8_DEBHA ATP-dependent RNA helicase DBP8 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP8 PE=3 SV=2 Length=441 Score = 278 bits (712), Expect = 6e-85, Method: Composition-based stats. Identities = 105/478 (22%), Positives = 180/478 (38%), Gaps = 77/478 (16%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGY---------IVKSQHSGNAQVTQTKFLPNAPK 288 L + P + K G+ K+ +TQ P+ Sbjct 12 LSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLTQWSEDPSGIY 71 Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 L++ P+RELA Q +QF + ++ +I+GG Q L+ VV TPG Sbjct 72 GLVLTPTRELALQI---AEQFAALGSSMNIKVSVIVGGEDIVKQALELQRRPHFVVATPG 128 Query 349 RLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 RL D + + L +V++L+LDEAD LLS + + R N +P + Q + Sbjct 129 RLADHILNSGEDTVCGLRRVKYLILDEADRLLSNSFGGDLERCFNILPST----DKRQTL 184 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT+ V+ L ++ P + +P +H V Sbjct 185 LFTATVTDA-VRALKDR----PV-----PKGKLPVFIHEV-------------------- 214 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + K + ++ + +++ + ++ +IIF + L + Sbjct 215 ---ETVDKVAIPSTLSVKYVFVPSYVKEAYLHSILNLPQYSDSLSIIFTNRTATAELLRR 271 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + +F LH + ER +L RFK G + LI TDVA+RG+DI V Sbjct 272 TLRKL---------EFRVASLHSEMPQTERTNSLHRFKAGAAKILIATDVASRGLDIPTV 322 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 V+N +P + +++HR+GR RA R G AIS+VA + + K Sbjct 323 ELVVNYDIPADADDFIHRVGRTARAGRKGDAISIVAEKDVDRILAIEERINKKMDLIEDI 382 Query 645 EDGGCTIWYNEMQLLSEIEEHLNCT---ISQVEPDIKVPVDEFDGKVTYGQKRAAGGG 699 D I++ LN T + D+ K+ +++A G Sbjct 383 SDNKV------------IKDSLNKTSVAKREAFMDMDRENFGEKRKINKSKRQANEGT 428 Score = 101 bits (252), Expect = 1e-21, Method: Composition-based stats. Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 20/156 (13%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+GV +++A+ M PT IQ+ IP IL G D + A+TGSGKT AF+ P++ Sbjct 2 SFEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLT 61 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLCCQ 112 E + + + ++ +A +G + + Q Sbjct 62 QWSE---------DPSGIYGLVLTPTRELALQIAEQFAALGSSMNIKVSVIVGGEDIVKQ 112 Query 113 SREV-KEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 + E+ + H AT G + GL RV Sbjct 113 ALELQRRPHFVVATPGRLADHILNSGEDTVCGLRRV 148 >sp|O01836|GLH3_CAEEL ATP-dependent RNA helicase glh-3 OS=Caenorhabditis elegans OX=6239 GN=glh-3 PE=1 SV=1 Length=720 Score = 287 bits (733), Expect = 6e-85, Method: Composition-based stats. Identities = 99/427 (23%), Positives = 172/427 (40%), Gaps = 58/427 (14%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA------PKALIVEPSRELAEQTLNN 305 +A ++ G +++ K L P+ +I+ P+RELA+Q N Sbjct 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++F Y +++ + GG+ S + G I+VGT GR+ G + L + R Sbjct 395 GRKFS-YQSVMEIKP--VYGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCR 451 Query 366 FLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 +LVLDEAD ++ G+ I ++ N + + Q ++ SAT S V++ + K++ Sbjct 452 YLVLDEADRMIDSMGFGPEIEQIINY--KNMPKNDKRQTMMFSATFPS-SVQEAARKLLR 508 Query 425 -FPTWVDLKGEDSVPDTVHHVVVPVN--PKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 T + + + V + K D+L + LG Sbjct 509 EDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLKLLG--------------------- 547 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 I Y + + + I+F + D L Q Sbjct 548 ---------IDIDTYTTEKNSDVFVKKTIVFVAQQKMADTLASIM---------SAAQVP 589 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 + +HG R+ ER L+ F+ G LI T V RG+DI GV +VIN +P+ +Y+H Sbjct 590 AITIHGAREQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIH 649 Query 602 RIGRVGRAERMGLAISLVA-TEKEKVWYHVCSSR--GKGCYNTRLKEDGGCTIWYNEMQL 658 RIGR GR G A S ++ + ++ + + + + +KE G T N+ + Sbjct 650 RIGRTGRVGNSGRATSFISLADDVQILPQLVRTLADAEQVVPSWMKEAAGGTSNPNKFEK 709 Query 659 LSEIEEH 665 + EE Sbjct 710 SIDTEEP 716 Score = 99.8 bits (247), Expect = 3e-20, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 49/103 (48%), Gaps = 2/103 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS+ + + + VE + T IQ ++PL+ G D+L A+TGSGKT AF +P++ Sbjct 298 KSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIM 357 Query 62 QIVYETLKDQQEGKK-GKTTIKTGASVLNKWQMNPYDRGSAFA 103 + KD G + G + + Y+ G F+ Sbjct 358 SRLI-LEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFS 399 >sp|Q54IV3|DDX42_DICDI Probable ATP-dependent RNA helicase ddx42 OS=Dictyostelium discoideum OX=44689 GN=ddx42 PE=3 SV=1 Length=986 Score = 292 bits (747), Expect = 7e-85, Method: Composition-based stats. Identities = 94/390 (24%), Positives = 160/390 (41%), Gaps = 59/390 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKS-QHSGNAQVTQTK-FLPNAPKALIVEPSRELAEQTLN 304 +A++K G S + + Q + P AL + P+RELA Q Sbjct 337 PIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAPTRELAHQIYL 396 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 ++ KY KL+ ++ GGV+ + Q L+ G +I+V TPGRL D++ L++V Sbjct 397 ETLKYSKYF---KLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATKLNRV 453 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 +LVLDEAD + G+ + + N + Q ++ SAT +V++ + I+ Sbjct 454 SYLVLDEADKMFDFGFGPQVLSIVNHV------RPDRQTLLFSATF-KPNVEEFARTILS 506 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 P + + S + +V + +D+ + + Sbjct 507 DPIKISIGMIGSANSDITQIVQVLKSDSDKWNWLTNQLALLLS----------------- 549 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 +IF TK+ + L + G F Sbjct 550 ---------------------QGSVLIFVSTKVAVEQLSSNLTKFG---------FQTCT 579 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LHGD+ ER Q ++ FK+G + LI TDVAARG+DI + V+N + +++ HRIG Sbjct 580 LHGDKNQIERSQTIQTFKEGKINILIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIG 639 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSR 634 R GRA G+A +L+ + + + Sbjct 640 RTGRAGNTGVAYTLITPKDIHFSVDLIKNL 669 Score = 104 bits (260), Expect = 8e-22, Method: Composition-based stats. Identities = 44/177 (25%), Positives = 68/177 (38%), Gaps = 17/177 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F G + QA+ + PT IQ ++IP+ L G D++ A+TGSGKT F P Sbjct 304 VTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPS 363 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA--------IGSDGLCCQ 112 I + DQ +KG I + + Y ++ + G+ Q Sbjct 364 ISHIM----DQPYLEKGDGPIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQ 419 Query 113 SREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGG 169 + + GC G+ + L RV + LD F FGFG Sbjct 420 QQCKELKAGCEIIVA-TPGRLIDMIKLKATKLNRVSYLV----LDEADKMFDFGFGP 471 >sp|Q12389|DBP10_YEAST ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP10 PE=1 SV=2 Length=995 Score = 292 bits (747), Expect = 7e-85, Method: Composition-based stats. Identities = 119/541 (22%), Positives = 204/541 (38%), Gaps = 73/541 (13%) Query 195 YLDIDKGHVKFSKN-----------GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFG 243 D D + FS N GL+ + ++K + ++ + Sbjct 114 GDDEDDVNEYFSTNNLEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLIL- 172 Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL 303 V +++ G ++ A +A+I+ PSRELA QT Sbjct 173 -------QSRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGA-RAVILSPSRELAMQTF 224 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 N K F + +LR +L+ GG + +Q ++ D+++ TPGR L L+L Sbjct 225 NVFKDFAR---GTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKS 281 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 V ++V DEAD L G+ + +N + +P Q ++ SATL + V + + Sbjct 282 VEYVVFDEADRLFEMGFQEQLNELLASLPTT------RQTLLFSATLPNSLV-DFVKAGL 334 Query 424 HFPTWVDLKGEDSVPDTVHHVVVPV-NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 P V L E V + + + + N + + + I+ ++ + ++ Sbjct 335 VNPVLVRLDAETKVSENLEMLFLSSKNADREANLLYILQEIIKIPLATSEQLQKLQNSNN 394 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQ--------------AIIFCRTKIDCDNLEQYFIQ 528 E S++ + R K+ K + I+F T+ + + Q Sbjct 395 EADSDSDDENDRQKKRRNFKKEKFRKQKMPAANELPSEKATILFVPTRHHVEYISQLLRD 454 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 G + ++G H RK+ L F+ G L+ TDVAARG+DI + VI Sbjct 455 CG---------YLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAARGVDIPMLANVI 505 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 N TLP + +VHR+GR RA G A S+VA + + GK Sbjct 506 NYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLELFLGKKI---------- 555 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDIL 708 LL+ + + L + + D P +F KR G + V+ L Sbjct 556 ---------LLTPMYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGL 606 Query 709 A 709 Sbjct 607 G 607 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 30/105 (29%), Positives = 51/105 (49%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F G+ + ++ + PT IQ ++IPLIL D++ A TGSGKT AF +P+++ Sbjct 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + GK G + S + M ++ FA G++ Sbjct 198 KLKSHS-----GKIGARAV--ILSPSRELAMQTFNVFKDFARGTE 235 >sp|A7TK63|DBP8_VANPO ATP-dependent RNA helicase DBP8 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP8 PE=3 SV=1 Length=431 Score = 278 bits (711), Expect = 8e-85, Method: Composition-based stats. Identities = 101/483 (21%), Positives = 178/483 (37%), Gaps = 68/483 (14%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY---------IVKSQHSGNAQVT 278 F + L ++ + P + + G K+ ++ Sbjct 4 FKSLGLSRWLVE-SLNAMRITHPTAIQKHCIPEILKGRDCIGGAKTGSGKTIAFAGPMLS 62 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 Q P+ +++ P+RELA Q +QF + +R L++GG + Q L+ Sbjct 63 QWSDDPSGMFGVVLTPTRELAIQI---AEQFTALGSSMNIRVCLVVGGESIVKQALELQK 119 Query 339 GVDIVVGTPGRLDDLV----STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 ++ TPGRL + LS+V++LVLDEAD +L+Q ++ ++ ++P Sbjct 120 KPHFIIATPGRLAHHILSSGEEVVGGLSRVKYLVLDEADLILTQTFAADLSTCIAKLP-- 177 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 ++ Q ++ +AT+ V+ L +DS P + V V+ Sbjct 178 --PKQKRQTLLFTATITDQ-VRALQNAP----------AQDSKPPLFAYEVENVDNVAVP 224 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 +L + PE EA Y + +++K I+F Sbjct 225 STLKLEYLLV-----------------PEHVKEAY-----LYQLLTCEDYKDSSVIVFVN 262 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 + L + + + LH ER +L+RF+ R LI TDV Sbjct 263 RTTAAEVLRRTL---------RSLEVRVASLHSQMPQSERINSLQRFRANAARVLIATDV 313 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 AARG+DI V VIN +P + ++HR GR RA R G AIS V + Sbjct 314 AARGLDIPTVELVINYDIPQDPDTFIHRSGRTARAGRSGDAISFVTPRDVSRIEAIEERI 373 Query 635 GKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 K ++ E + L+++ + ++ +E + K +K Sbjct 374 NK-----KMDECKKVHDTAVIRKALTKVTKAKRESLMDMEKANFGEKRKTQKKKNLAEKS 428 Query 695 AAG 697 Sbjct 429 LRA 431 Score = 99.8 bits (247), Expect = 6e-21, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 20/158 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M F +G+ + +++ M PT IQ IP IL G D + A+TGSGKT AF+ P+ Sbjct 1 MQDFKSLGLSRWLVESLNAMRITHPTAIQKHCIPEILKGRDCIGGAKTGSGKTIAFAGPM 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLC 110 + + + + + ++ +A +G + + Sbjct 61 LSQWSD---------DPSGMFGVVLTPTRELAIQIAEQFTALGSSMNIRVCLVVGGESIV 111 Query 111 CQSREV-KEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 Q+ E+ K+ H AT G + GL RV Sbjct 112 KQALELQKKPHFIIATPGRLAHHILSSGEEVVGGLSRV 149 >sp|Q0U8V9|DBP8_PHANO ATP-dependent RNA helicase DBP8 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP8 PE=3 SV=1 Length=508 Score = 280 bits (717), Expect = 8e-85, Method: Composition-based stats. Identities = 100/435 (23%), Positives = 166/435 (38%), Gaps = 56/435 (13%) Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S+ G V + + P+ LI+ P+RELA Q +K + Sbjct 121 SRTGTGKTVAFSVPI---LQKWAEDPSGIFGLIITPTRELAIQIYEQVKAISA---PQSM 174 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADG 374 + +L+ GG R+Q L + +V+ TPGRL + + T + L +VRF+V DEAD Sbjct 175 KPILVTGGSDQREQAIALASRPHVVIATPGRLAEHIKTSGEDTICGLRRVRFVVFDEADR 234 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 LL+ G I + + V ++ Q ++ +AT+ P + LK + Sbjct 235 LLAPGRGSMIPDIETCL-SVLPPKEQRQTLLFTATVT--------------PEVLALKSQ 279 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 P + V V+ +T L + +++T H + +P ++ Sbjct 280 PRAPGRLPIFVCEVDTETLATPASLSQLYLQTPVTHKECYLHVLLLTPLNLTK------- 332 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 IIFC LE LH K +R Sbjct 333 -------------SVIIFCNRTKTATLLEYMLRML---------DHRVTALHSGLKQQDR 370 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 NL RF+ R L+ TDVAARG+DI V V+N +P + +Y+HR+GR RA R G Sbjct 371 ISNLARFRAQAARILVATDVAARGLDIPEVGLVVNFDVPRDPDDYIHRVGRTARAGRPGN 430 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 +++ + ++ + G + +E+G L + E + +E Sbjct 431 SVTFIGQRDVELVLAIEERVGGKM--SEFEEEGVSVEGRVVRDALKIVTEKKREALLNIE 488 Query 675 PDIKVPVDEFDGKVT 689 V + G Sbjct 489 EGRDVKGNRMVGMKK 503 Score = 97.5 bits (241), Expect = 7e-20, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 9/102 (9%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ + V P + ++ M+ PT IQ IP IL G D + + TG+GKT AFS+P++Q Sbjct 78 SFASIDVAPWLVASLASMEIKRPTGIQKACIPEILKGRDCIGGSRTGTGKTVAFSVPILQ 137 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 E + + + Y++ A + Sbjct 138 KWAE---------DPSGIFGLIITPTRELAIQIYEQVKAISA 170 >sp|A7E436|DBP8_SCLS1 ATP-dependent RNA helicase dbp8 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp8 PE=3 SV=1 Length=540 Score = 281 bits (719), Expect = 8e-85, Method: Composition-based stats. Identities = 110/464 (24%), Positives = 169/464 (36%), Gaps = 71/464 (15%) Query 224 NQALFPACVLKNAELKFNFGEEEFKFPPKDG---FVALSKAPDGYIVKSQHSGNAQVTQT 280 Q F A +K L + G K P + K D SG Sbjct 109 AQTTFAALDVK-PWLVASLGAMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAV 167 Query 281 KFL------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 L P AL++ P+RELA Q +QFK L+ +LI GG R Q + Sbjct 168 PILQKWAEDPFGIFALVLTPTRELALQIY---EQFKAISSPQSLKAVLITGGSDMRPQAT 224 Query 335 VLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQG-YSDFINRMHN 389 L +V+ TPGRL D + T + L +VR +VLDEAD LL+ G + + Sbjct 225 ALAQRPHVVIATPGRLADHIRTSGEDTVCALRRVRMVVLDEADRLLASGSVGSMLPDVEE 284 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + + + Q ++ +AT+ P LK V V+ Sbjct 285 CLSLLPPPSE-RQTLLFTATVT--------------PEVRALKDMPRTLGKPPVFVCEVD 329 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + + L + H++ H + +++ Sbjct 330 TQALAIPSSLNQMHLQVPVTHREHYLHMFL--------------------LTEKNLPKSI 369 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +IFC D L + LH +R NL RF+ R L Sbjct 370 VIFCNRTATADYLTHLLRLL---------EHRVTALHSKLPQRQRIDNLGRFRASAARIL 420 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TDVAARG+DI V VIN +P + +Y+HR+GR RA R G A++ V ++ Sbjct 421 VATDVAARGLDIPEVGLVINYDVPRDPDDYIHRVGRTARAGRKGEAVTFVGQRDVQLILA 480 Query 630 VCSSRGKGCY---------NTRLKEDGGCTIWYNEMQLLSEIEE 664 + G+ TR+ + + + + + EIEE Sbjct 481 IEKRVGRQMEAWTEEGVNLETRVIRESLKLVGEKKREAMLEIEE 524 Score = 95.6 bits (236), Expect = 3e-19, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (43%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+ + V P + ++ M PT IQ IP IL G D + + TGSGKT AF++P++ Sbjct 111 TTFAALDVKPWLVASLGAMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPIL 170 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q E + + + Y++ A + Sbjct 171 QKWAE---------DPFGIFALVLTPTRELALQIYEQFKAISS 204 >sp|P0CQ96|SUB2_CRYNJ ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=SUB2 PE=3 SV=1 Length=442 Score = 278 bits (711), Expect = 8e-85, Method: Composition-based stats. Identities = 102/417 (24%), Positives = 161/417 (39%), Gaps = 72/417 (17%) Query 232 VLKNAELKFNFGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTK 281 L EL + F+ P + G L +A G K+ A + Q + Sbjct 64 FLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGM-GKTAVFVLAALQQIE 122 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-- 339 + +I+ +RELA Q N +F K++ +R + GG +L N Sbjct 123 PVDGEVSIIILCHTRELAYQIKNEFTRFSKFM--TNVRTGVFYGGTPISADQEILANKEK 180 Query 340 -VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 IVVGTPGR LV KLN S+V+ VLDE D +L + R +I + T Sbjct 181 CPHIVVGTPGRTMALVRDKKLNASKVKHFVLDECDKMLE---QLDMRRDVQEIFRATPHH 237 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWE 457 K QV++ SATL S D++ +K M P + + E + + + + Sbjct 238 K--QVMMFSATL-SKDIRATCKKFMQSPLEIYVDDETKLTLHGLQQFYLKLEERE----- 289 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K + + +Q IF ++ Sbjct 290 -----------------------------------KNRKLNDLLDNLEFNQVCIFVKSVQ 314 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 L+ + F +C+H + ER ++FK + R L+ TD+ R Sbjct 315 RATQLDALLQE---------CNFPSICIHSGLQQAERISRFQQFKAFEKRILVATDIFGR 365 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 GID+ V VIN P + +Y+HR+GR GR GLAIS V+++ ++ R Sbjct 366 GIDVERVNVVINYDAPSDADSYLHRVGRAGRFGTKGLAISFVSSDADQEVLQRIQER 422 Score = 84.4 bits (207), Expect = 7e-16, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 9/108 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ ++ + P+++Q E IP + G DVL A++G GKT F + + Sbjct 59 TGFRDFLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAAL 118 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 Q + E G+ +I + + + F+ + Sbjct 119 QQI--------EPVDGEVSI-IILCHTRELAYQIKNEFTRFSKFMTNV 157 >sp|P0CQ97|SUB2_CRYNB ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=SUB2 PE=3 SV=1 Length=442 Score = 278 bits (711), Expect = 8e-85, Method: Composition-based stats. Identities = 102/417 (24%), Positives = 161/417 (39%), Gaps = 72/417 (17%) Query 232 VLKNAELKFNFGEEEFKFPPKD----------GFVALSKAPDGYIVKSQHSGNAQVTQTK 281 L EL + F+ P + G L +A G K+ A + Q + Sbjct 64 FLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGM-GKTAVFVLAALQQIE 122 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-- 339 + +I+ +RELA Q N +F K++ +R + GG +L N Sbjct 123 PVDGEVSIIILCHTRELAYQIKNEFTRFSKFM--TNVRTGVFYGGTPISADQEILANKEK 180 Query 340 -VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 IVVGTPGR LV KLN S+V+ VLDE D +L + R +I + T Sbjct 181 CPHIVVGTPGRTMALVRDKKLNASKVKHFVLDECDKMLE---QLDMRRDVQEIFRATPHH 237 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWE 457 K QV++ SATL S D++ +K M P + + E + + + + Sbjct 238 K--QVMMFSATL-SKDIRATCKKFMQSPLEIYVDDETKLTLHGLQQFYLKLEERE----- 289 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K + + +Q IF ++ Sbjct 290 -----------------------------------KNRKLNDLLDNLEFNQVCIFVKSVQ 314 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 L+ + F +C+H + ER ++FK + R L+ TD+ R Sbjct 315 RATQLDALLQE---------CNFPSICIHSGLQQAERISRFQQFKAFEKRILVATDIFGR 365 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 GID+ V VIN P + +Y+HR+GR GR GLAIS V+++ ++ R Sbjct 366 GIDVERVNVVINYDAPSDADSYLHRVGRAGRFGTKGLAISFVSSDADQEVLQRIQER 422 Score = 84.4 bits (207), Expect = 7e-16, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 9/108 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+ +A+ ++ + P+++Q E IP + G DVL A++G GKT F + + Sbjct 59 TGFRDFLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAAL 118 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 Q + E G+ +I + + + F+ + Sbjct 119 QQI--------EPVDGEVSI-IILCHTRELAYQIKNEFTRFSKFMTNV 157 >sp|A1CKJ0|DBP8_ASPCL ATP-dependent RNA helicase dbp8 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp8 PE=3 SV=1 Length=523 Score = 281 bits (718), Expect = 8e-85, Method: Composition-based stats. Identities = 104/431 (24%), Positives = 166/431 (39%), Gaps = 66/431 (15%) Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S+ G + + + P LI+ P+RELA Q IK + Sbjct 137 SRTGSGKTIAFSV---PMLQKWAEDPLGIFGLILTPTRELALQIFEQIKAISA---PQSM 190 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADG 374 + +LI GG R Q L +VV TPGRL D + + + L +VR +VLDEAD Sbjct 191 KPVLITGGTDMRSQALALAGRPHVVVATPGRLADHIKSSGEDTVCGLKRVRMVVLDEADR 250 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKL------SEKIMHFPTW 428 LLS G + + + + + Q ++ +AT+ +V+ L + K F T Sbjct 251 LLSSGPGSMLPDVETCLSALPPSSE-RQTLLFTATVTP-EVRALKNMPRAANKPPVFVTE 308 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 + + + +VP T+ + V L R H+ Sbjct 309 ISSESQGTVPPTLKQTYLKVP-----LTHREAFLHV------------------------ 339 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + + + + AIIFC D LE+ + LH Sbjct 340 ---------LLSTEGNSTKPAIIFCNHTKTADLLERMLRRL---------SHRVTSLHSL 381 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ER NL RF+ R L+ TDVA+RG+DI V V+N +P +YVHR+GR R Sbjct 382 LPQSERNANLARFRASAARILVATDVASRGLDIPSVSLVVNYDVPRNPDDYVHRVGRTAR 441 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 A R G +++LV ++ + + G+ +E +L E+ E Sbjct 442 AGRSGESVTLVGQRDVQLVLAIEARVGRQMEEWS-EEGVSIEGRVVRTGVLKEVGEAKRE 500 Query 669 TISQVEPDIKV 679 +++ V Sbjct 501 ASGEIDEGRDV 511 Score = 99.0 bits (245), Expect = 2e-20, Method: Composition-based stats. Identities = 33/141 (23%), Positives = 56/141 (40%), Gaps = 20/141 (14%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++FS + V P + ++ + PT IQ IP IL G D + + TGSGKT AFS+P++ Sbjct 93 SSFSALNVAPWLVGSLTTLAVRKPTAIQKACIPEILNGKDCIGGSRTGSGKTIAFSVPML 152 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLCC 111 Q E + + + +++ A + G + Sbjct 153 QKWAE---------DPLGIFGLILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRS 203 Query 112 QSREVK-EWHGCRATKGLMKG 131 Q+ + H AT G + Sbjct 204 QALALAGRPHVVVATPGRLAD 224 >sp|A5DZT7|DBP10_LODEL ATP-dependent RNA helicase DBP10 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP10 PE=3 SV=1 Length=948 Score = 291 bits (744), Expect = 1e-84, Method: Composition-based stats. Identities = 106/442 (24%), Positives = 172/442 (39%), Gaps = 39/442 (9%) Query 253 DGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 V +++ G ++ P+ +A+I+ PSRELA QT +K+F Sbjct 159 RDVVGMARTGSGKTAAFVLPLIEKLKLR--SPSGVRAVILSPSRELALQTYKQVKEFSH- 215 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L+ +++IGG + + + DI+V TPGR L + +L V+++V DEA Sbjct 216 --GTNLQSIVLIGGDSLEEDFGKMMTKPDIIVCTPGRFLHLKVEMQYDLMSVQYIVFDEA 273 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D L G+++ +N + +P Q ++ SATL V+ ++ + P V L Sbjct 274 DRLFEMGFAEQLNELLLALP------SNRQSLLFSATLPRSLVE-FAKAGLTNPVLVRLD 326 Query 433 GEDSVPDTVH----------------HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 + + + + +++ V E + K D Sbjct 327 ADSKLSENLQMAYFTTKRNEREANLLYILQEVIKMPLGTPEEVKKLAAMDKRSIESDEEN 386 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 A + K E A + IIF TK + + G Sbjct 387 EEAKEQNNGKKRKYKFKKERMPSAKELPSEKSTIIFVPTKHHVEYVTSLLKDAG------ 440 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 + ++G H RK L F+ G + L+ TDVAARGIDI + VIN TLP Sbjct 441 ---YLVSYIYGTLDQHARKNQLYLFRIGLTKILVVTDVAARGIDIPVLANVINFTLPGSS 497 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM 656 + ++HR+GR RA G A S+V + + + GK T + E + Sbjct 498 KIFIHRVGRTARAGNKGWAYSIVNSSELPYLLDLEIFLGKKLLLTSMHEAK--CELLKKK 555 Query 657 QLLSEIEEHLNCTISQVEPDIK 678 Q S I +N T V I Sbjct 556 QGGSFIPPRINYTERLVVGAIP 577 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 28/105 (27%), Positives = 48/105 (46%), Gaps = 8/105 (8%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F+ G + + + + PT IQ SIPLI+ DV+ A TGSGKT AF +P+I+ Sbjct 122 SFASFGFSKFLLANIAKKGYKQPTPIQRRSIPLIIDNRDVVGMARTGSGKTAAFVLPLIE 181 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + + S + + Y + F+ G++ Sbjct 182 KL--------KLRSPSGVRAVILSPSRELALQTYKQVKEFSHGTN 218 >sp|Q2UKX3|DBP8_ASPOR ATP-dependent RNA helicase dbp8 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp8 PE=3 SV=1 Length=443 Score = 278 bits (711), Expect = 1e-84, Method: Composition-based stats. Identities = 97/382 (25%), Positives = 149/382 (39%), Gaps = 65/382 (17%) Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S+ G + + Q F A+++ P+RELA Q IK + Sbjct 57 SRTGSGKTIAFAVPILQKWAQDPF---GIFAVVLTPTRELALQIYEQIKAISA---PQSM 110 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADG 374 + LLI GG R Q L +V+ TPGRL D ++T + L +VR +VLDEAD Sbjct 111 KPLLITGGTDMRSQALALSQRPHVVIATPGRLADHINTSGEDTVCGLKRVRMVVLDEADR 170 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS------EKIMHFPTW 428 LL+ G + + + + + Q ++ +ATL +V+ L K F T Sbjct 171 LLAPGPGSMLPDVETCLSALPPSSE-RQTLLFTATLTP-EVRALKSMPRAENKPPVFVTE 228 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 + + ++P T+ + V Sbjct 229 ISTENNGAIPPTLKQTYLKVP--------------------------------------M 250 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + + + + + AIIFC D LE+ + LH Sbjct 251 THREAFLHVLLSTERNSTKPAIIFCNHTKTADLLERMLRRL---------SHRVTSLHSL 301 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 ER NL RF+ R L+ TDVA+RG+DI V VIN +P +YVHR+GR R Sbjct 302 LPQSERNSNLARFRASAARILVATDVASRGLDIPSVSLVINFDVPRNPDDYVHRVGRTAR 361 Query 609 AERMGLAISLVATEKEKVWYHV 630 A R G A++LV ++ + Sbjct 362 AGRHGEAVTLVGQRDVQLVLAI 383 Score = 95.6 bits (236), Expect = 2e-19, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 20/138 (14%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 + + V P + ++ M PT IQ IP IL G D + + TGSGKT AF++P++Q Sbjct 16 TTLNVSPWLVGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFAVPILQKW 75 Query 65 YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLCCQSR 114 + + + + Y++ A + G + Q+ Sbjct 76 AQ---------DPFGIFAVVLTPTRELALQIYEQIKAISAPQSMKPLLITGGTDMRSQAL 126 Query 115 EVKEW-HGCRATKGLMKG 131 + + H AT G + Sbjct 127 ALSQRPHVVIATPGRLAD 144 >sp|A2QUY7|DBP5_ASPNC ATP-dependent RNA helicase dbp5 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp5 PE=3 SV=1 Length=482 Score = 279 bits (714), Expect = 1e-84, Method: Composition-based stats. Identities = 106/477 (22%), Positives = 196/477 (41%), Gaps = 86/477 (18%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + KN +DLGL I + ++ L G P V Sbjct 66 PNNPLFSVKNFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLGN------PAKNLVGQ 119 Query 259 SKAPDGYIVKSQHSGNAQVTQT-KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 S++ G + +++ + + L P+ALI+ P+RELA Q + I+ +++D Sbjct 120 SQSGTGKTAAFVLNILSRLDLSSEQLQKTPQALILAPTRELARQIVGVIQVMGQFLDG-- 177 Query 318 LRELLIIG-GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 L+IG V A + +VVGTPG + D++ + +++R LVLDEAD +L Sbjct 178 ----LVIGTAVPADTGARPAKMECSVVVGTPGTVMDMIKRRIMIANKLRVLVLDEADNML 233 Query 377 S-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 QG D R+ +P + +QV++ SAT + V + + K + L+ E+ Sbjct 234 DQQGLGDQCIRVKALLP------RDIQVVLFSATFPAH-VHEYASKFAPQANEITLQHEE 286 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + + + + D+ + + T Sbjct 287 LTVEGIKQLYLDCSNDEDKYQTLVNLYGLLT----------------------------- 317 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + +IIF +T+ +E+ + +G + L G + +R Sbjct 318 ----------VGSSIIFVKTRASAQEIEKRMVAEG---------HTVASLTGGIEGSQRD 358 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIG 604 +++F+ G + LI T+V ARGID+ V VIN +P+ + Q Y+HRIG Sbjct 359 AVIDQFRAGHAKVLITTNVLARGIDVSTVSMVINYDIPEIHQPGARQRQADFQTYLHRIG 418 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R GR R+G++IS V+ +E + + + + +NT ++ W +++ + Sbjct 419 RTGRFGRVGVSISFVSNREE---WEMLNQIQR-YFNTNIQR-IDTKDWDEVEEIIKK 470 Score = 88.3 bits (217), Expect = 5e-17, Method: Composition-based stats. Identities = 30/145 (21%), Positives = 57/145 (39%), Gaps = 14/145 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F ++G+ P I Q + M++ P+ IQ ++PL+LG +++ +++G+GKT AF + Sbjct 73 VKNFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLGNPAKNLVGQSQSGTGKTAAFVL 132 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ + + + Q KT + + DGL + Sbjct 133 NILSRLDLSSEQLQ-----KTPQALILAPTRELARQIVGVIQVMGQFLDGLVIGT----- 182 Query 119 WHGCRATKGLMKGKHYYEVSCHDQG 143 A G K V G Sbjct 183 --AVPADTGARPAKMECSVVVGTPG 205 >sp|Q5ACK7|DRS1_CANAL ATP-dependent RNA helicase DRS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DRS1 PE=3 SV=1 Length=613 Score = 283 bits (724), Expect = 1e-84, Method: Composition-based stats. Identities = 105/468 (22%), Positives = 182/468 (39%), Gaps = 78/468 (17%) Query 216 FEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV---KSQHS 272 +E + F L LK E +F P ++ A G + S Sbjct 120 YEESSPQQTHTSFQTLQLSRPVLK-GIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGS 178 Query 273 GNAQVTQTKFLPN-------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 G + + K +I+ P+RELA Q K+ +++N L L +G Sbjct 179 GKTGAYMIPIIERLLYKPSTSTKVIILTPTRELALQVYEFGKKLSHHVNN--LNIGLAVG 236 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G+ R Q L+ DIV+ TPGRL D + ++ ++ ++ LV+DEAD +L +G+ D + Sbjct 237 GLNLRQQEEQLKTRPDIVIATPGRLIDHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDEL 296 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + + IP+ + Q ++ SAT+++ ++ L + + P + + SV + Sbjct 297 TEILSLIPK-----HKRQTLLFSATMNTR-IQDLIQLSLQKPVRIMIDPPKSVASKLLQQ 350 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + + L + + + Sbjct 351 FVRIRKRDQLKPALLYQ---------------------------------------LLKG 371 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + ++F K L G LHG +R QN++ FK Sbjct 372 VSSRVVVFVARKETAHRLRIVLGLLG---------LKVSELHGALTQEQRLQNVKNFKSL 422 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT-EK 623 +V LICTD+AARG+DI + VIN +P + Y+HR+GR RA R G +I+ V + Sbjct 423 EVPVLICTDLAARGLDIPKIELVINYDMPKTFEIYLHRVGRTARAGRDGTSITFVGESSQ 482 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 E+ GKG T + + + + +++ E I Sbjct 483 ERAIVKSAIVNGKGVAKT---------VDWKQAEETNKLLESKESVID 521 Score = 104 bits (260), Expect = 5e-22, Method: Composition-based stats. Identities = 29/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F + + + + + E+ + PT IQ+ SIP+ L G D++ A+TGSGKTGA+ IP+I Sbjct 130 TSFQTLQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPII 189 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + K +T + + + Y+ G + + L Sbjct 190 ERLLY--------KPSTSTKVIILTPTRELALQVYEFGKKLSHHVNNL 229 >sp|A6ZXU0|DBP10_YEAS7 ATP-dependent RNA helicase DBP10 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP10 PE=3 SV=1 Length=995 Score = 292 bits (746), Expect = 1e-84, Method: Composition-based stats. Identities = 118/541 (22%), Positives = 205/541 (38%), Gaps = 73/541 (13%) Query 195 YLDIDKGHVKFSKN-----------GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFG 243 D D + FS N GL+ + ++K + ++ + Sbjct 114 GDDEDDVNEYFSTNNLEKTKHKKGSFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLIL- 172 Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL 303 V +++ G ++ A +A+I+ PSRELA QT Sbjct 173 -------QSRDIVGMARTGSGKTAAFILPMVEKLKSHSGKIGA-RAVILSPSRELAMQTF 224 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 N K F + +LR +L+ GG + +Q ++ D+++ TPGR L L+L Sbjct 225 NVFKDFAR---GTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKS 281 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 V ++V DEAD L G+ + +N + +P Q ++ SATL + V + + Sbjct 282 VEYVVFDEADRLFEMGFQEQLNELLASLPTT------RQTLLFSATLPNSLV-DFVKAGL 334 Query 424 HFPTWVDLKGEDSVPDTVHHVVVPV-NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 P V L E V + + + + N + + + I+ ++ + ++ Sbjct 335 VNPVLVRLDAETKVSENLEMLFLSSKNADREANLLYILQEIIKIPLATSEQLQKLQNSNN 394 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQ--------------AIIFCRTKIDCDNLEQYFIQ 528 E S++ + R K+ K + I+F T+ + + Q Sbjct 395 EADSDSDDENDRQKKRRNFKKEKFRKQKMPAANELPSEKATILFVPTRHHVEYISQLLRD 454 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 G + ++G H RK+ L F+ G L+ TDVAARG+DI + VI Sbjct 455 CG---------YLISYIYGTLDQHARKRQLYNFRAGLTSILVVTDVAARGVDIPMLANVI 505 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 N TLP + +VHR+GR RA G A S+VA + + Sbjct 506 NYTLPGSSKIFVHRVGRTARAGNKGWAYSIVAENELPYLLDLE----------------- 548 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDIL 708 ++ E LL+ + + L + + D P +F KR G + V+ L Sbjct 549 --LFLGEKILLTPMYDSLVDVMKKRWIDEGKPEYQFQPPKLSYTKRLVLGSCPRLDVEGL 606 Query 709 A 709 Sbjct 607 G 607 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 30/105 (29%), Positives = 51/105 (49%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F G+ + ++ + PT IQ ++IPLIL D++ A TGSGKT AF +P+++ Sbjct 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + GK G + S + M ++ FA G++ Sbjct 198 KLKSHS-----GKIGARAV--ILSPSRELAMQTFNVFKDFARGTE 235 >sp|A7TJT7|SUB22_VANPO ATP-dependent RNA helicase SUB2-2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=SUB2-2 PE=3 SV=1 Length=442 Score = 278 bits (710), Expect = 1e-84, Method: Composition-based stats. Identities = 95/388 (24%), Positives = 155/388 (40%), Gaps = 63/388 (16%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 G L +A G + K+ + + Q +P +++ +RELA Q N +F Sbjct 91 QSIHGTDVLCQAKSG-LGKTAVFVLSTLQQLDPVPGEVSVVVICNARELAYQIRNEYLRF 149 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRF 366 KY+ P ++ + GG +L+N IVV TPGRL LV ++LS V+ Sbjct 150 SKYM--PDVKTAVFYGGTPITKDAELLKNKETAPHIVVATPGRLKALVRDKLIDLSHVKN 207 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 V+DE D +L + R I + T K QV++ SATL S +++ + + + P Sbjct 208 FVIDECDKVLE---ELDMRRDVQDIFRATPRDK--QVMMFSATL-SEEIRPICRRFLQNP 261 Query 427 TWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + + E + + + Sbjct 262 LEIFVDDEAKLTLHGLQQYYIKLQENE--------------------------------- 288 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 K + + + + +Q IIF ++ + L + + F + + Sbjct 289 -------KNRKLAQLLDDLEFNQVIIFVKSTKRANELTKLLNE---------SNFPAITV 332 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG+ K ER + FK+ + R + TDV RGIDI + IN L E Y+HR+GR Sbjct 333 HGNMKQAERIARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYDLTTEADQYLHRVGR 392 Query 606 VGRAERMGLAISLV-ATEKEKVWYHVCS 632 GR GLAIS V + E E+V + Sbjct 393 AGRFGTKGLAISFVSSPEDEEVLGKIQE 420 Score = 76.3 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 45/103 (44%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+A+A+ + + P+++Q +IP + G DVL A++G GKT F + + Sbjct 58 TGFKDFLLKPELARAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTL 117 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + D G+ I + + F+ Sbjct 118 QQL-----DPVPGEVSVVVICNA----RELAYQIRNEYLRFSK 151 >sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0481100 PE=2 SV=2 Length=802 Score = 288 bits (736), Expect = 1e-84, Method: Composition-based stats. Identities = 109/425 (26%), Positives = 178/425 (42%), Gaps = 61/425 (14%) Query 262 PDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 G ++ A + LI+ P+RELA Q + I++ ++ D +R Sbjct 241 GSGKTAAFSLPVLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTD---IRCC 297 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEADGLLSQGY 380 LI+GG++ + Q L + DIVV TPGR+ D + + L + L+LDEAD LL G+ Sbjct 298 LIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGF 357 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 S I + P +R Q ++ SAT+ + ++ +L ++ P ++ P T Sbjct 358 SAEIQELIRMCP------RRRQTMLFSATM-TEEINELVTLSLNKPVRLEADPSLKRPAT 410 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + VV + + E + + Sbjct 411 LTEEVVRIRRAREANQEAV-------------------------------------LLAL 433 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + D+ IIF TK L+ F G LHG+ +R + LE Sbjct 434 CLKTFKDKVIIFSGTKHSAHRLKIIFGLSG---------MKAAELHGNLTQAQRLEALEL 484 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 FKK +V FLI TDVAARGIDI GV VIN + P + + Y+HR+GR RA R G A++ V Sbjct 485 FKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREGYAVTFVT 544 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVP 680 + + + G + + E +L+ E+E+ ++ I + + + Sbjct 545 DDDRSLLKAIAKKAGSQLKSRIVAEKPVAEC----AKLIEELEDQISTIIQEEREERILR 600 Query 681 VDEFD 685 E + Sbjct 601 KAEME 605 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 50/109 (46%), Gaps = 6/109 (6%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+ + + +A E + + PT IQA IPL L G D+ +A TGSGKT AFS+PV++ Sbjct 195 SFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVLE 254 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + K + + + + A +D CC Sbjct 255 RLLFRPK------RVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCC 297 >sp|Q9Y6V7|DDX49_HUMAN Probable ATP-dependent RNA helicase DDX49 OS=Homo sapiens OX=9606 GN=DDX49 PE=1 SV=1 Length=483 Score = 279 bits (713), Expect = 1e-84, Method: Composition-based stats. Identities = 108/449 (24%), Positives = 176/449 (39%), Gaps = 69/449 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 + +K G ++++ P L++ P+RELA Q Sbjct 34 PAILEGRDCLGCAKTGSGKTAAFVLPILQKLSED---PYGIFCLVLTPTRELAYQIAEQF 90 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST-GKLNLSQVR 365 + K + L++ +I+GG+ Q L +V+ TPGRL D + + ++ ++R Sbjct 91 RVLGKPLG---LKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFSIKKIR 147 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 FLV+DEAD LL QG +DF + + V + R Q ++ SATL +++L + Sbjct 148 FLVMDEADRLLEQGCTDFTVDLEAILAAVPA---RRQTLLFSATLTDT-LRELQGLATNQ 203 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P + + + S + + + V K + Sbjct 204 PFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLV--------------------------- 236 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 R EH+ IIF T C L + F V L Sbjct 237 ---------HLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKF---------SFPTVAL 278 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 H K ER L +FK R LI TDVA+RG+DI V VIN P + Y+HR+GR Sbjct 279 HSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGR 338 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 RA R G AI+LV + + + K ++E +Q+L+++ Sbjct 339 TARAGRQGQAITLVTQYDIHLVHAIEEQIKKKLEEFSVEEA-------EVLQILTQV--- 388 Query 666 LNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 + + E +IK+ FD K +++ Sbjct 389 ---NVVRRECEIKLEAAHFDEKKEINKRK 414 Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats. Identities = 34/142 (24%), Positives = 56/142 (39%), Gaps = 20/142 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MA F+E+G+ + + ++ PT +Q IP IL G D L A+TGSGKT AF +P+ Sbjct 1 MAGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLC 110 +Q + E + + ++ +G + Sbjct 61 LQKLSEDPY---------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMV 111 Query 111 CQSREVKEW-HGCRATKGLMKG 131 Q+ E+ H AT G + Sbjct 112 AQALELSRKPHVVIATPGRLAD 133 >sp|Q6BML1|PRP5_DEBHA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=PRP5 PE=3 SV=2 Length=913 Score = 290 bits (741), Expect = 2e-84, Method: Composition-based stats. Identities = 94/420 (22%), Positives = 170/420 (40%), Gaps = 62/420 (15%) Query 228 FPACVLKNAELKFNFGEEEFKFPPK-------DGFVALSKAPDGYIVKSQHSGNAQVTQT 280 P+ ++ E + N+ + ++K G + + Sbjct 323 LPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQ 382 Query 281 KFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 L + P LI+ P+RELA Q + F K ++ + GG + Q++ L+ Sbjct 383 PPLKKGDGPIGLIMTPTRELALQIHKELNHFTKKLN---ISSCCCFGGSSIESQIAELKK 439 Query 339 GVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 G I+VGTPGR+ DL++ NL +V +LVLDEAD + G+ + ++ ++ Sbjct 440 GAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRV---- 495 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 Q ++ SAT ++ L++KI+ P + + G V + V + D+ Sbjct 496 --RPDRQTVLFSATFP-RKMELLAKKILDNPMEIVVGGISVVASEITQKVELFENEDDKS 552 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 E S + + D + +IF Sbjct 553 LEEAKFSKLLSTLNDYGDKDAEC-----------------------------KILIFVEK 583 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV--RFLICTD 573 +I D L + + ++ C+ +HG + +RK + F + LI T Sbjct 584 QIAADELLVKLLTE---------KYPCLAIHGGKDQIDRKHAIREFSSSNSGVNILIATS 634 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 +AARG+D+ G+ VIN ++YVHR+GR GRA R G AI+ V++++ + + + Sbjct 635 IAARGLDVKGLNLVINYEAASHMEDYVHRVGRTGRAGRKGTAITFVSSKQGRAITDLVKA 694 Score = 107 bits (267), Expect = 1e-22, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 59/114 (52%), Gaps = 7/114 (6%) Query 1 MAAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ I +E +++ P+ IQA++IP I+ G D++ A+TGSGKT +F +P Sbjct 315 IIRWSQLGLPSTIMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLP 374 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF--AIGSDGLCC 111 +++ + DQ KKG I + + + + + F + CC Sbjct 375 LLRHIQ----DQPPLKKGDGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCC 424 >sp|A1D1R8|DRS1_NEOFI ATP-dependent RNA helicase drs1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=drs1 PE=3 SV=1 Length=819 Score = 288 bits (736), Expect = 2e-84, Method: Composition-based stats. Identities = 104/480 (22%), Positives = 186/480 (39%), Gaps = 73/480 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 ++ +D L+ I + + ++ + V + G Sbjct 299 RSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVAL--------LGKDIVGSAVTGSGKT 350 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + I+ P+RELA Q N + + D + ++GG Sbjct 351 AAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATHTD---ITFCQLVGG 407 Query 327 VAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + R+Q ++L+ D+++ TPGR +D + ++ + + LVLDEAD +L G++D +N Sbjct 408 FSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELN 467 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IPQ Q ++ SAT+ V KL ++ P + + + + + Sbjct 468 EILTTIPQS------RQTMLFSATMTD-SVDKLIRVGLNRPVRLMVDSKKNTSMNLTQEF 520 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + P R +RLG Y + E Sbjct 521 VRLRP--GREDKRLG-----------------------------------YLLYLCNEIY 543 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + I+F R K + + F G LHG +R +++E F++G Sbjct 544 TGRVIVFFRQKREAHRVRIVFGLLG---------LKAAELHGSMSQEQRIKSVENFREGK 594 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V FL+ TD+A+RG+DI GV VIN P + Y+HR+GR RA R G A ++ A K Sbjct 595 VAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRK 654 Query 626 VWYHVCSS--RGKGCYNTRLKEDGGCTIWYNEMQLLSEI------EEHLNCTISQVEPDI 677 + + +R+ + W + + L + EE L ++Q E + Sbjct 655 IVKSAVKAGKAQGAKIVSRVVDPAVADEWAAKAKGLEDEIEEVLQEEKLEKQMAQAEMQV 714 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 54/111 (49%), Gaps = 6/111 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F + + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P++ Sbjct 299 RSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL 358 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 + + +K T+ + + Y+ + A +D CQ Sbjct 359 ERLLFRP------RKVPTSRVAILMPTRELAVQCYNVATKLATHTDITFCQ 403 >sp|Q18212|DX39B_CAEEL Spliceosome RNA helicase DDX39B homolog OS=Caenorhabditis elegans OX=6239 GN=hel-1 PE=1 SV=1 Length=425 Score = 277 bits (707), Expect = 2e-84, Method: Composition-based stats. Identities = 97/414 (23%), Positives = 164/414 (40%), Gaps = 68/414 (16%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV---------KSQHSGNAQVTQTKF 282 L E+ G+ F+ P + + +A G V K+ + Q + Sbjct 46 FLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEP 105 Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVD 341 + + + +RELA Q ++F KY+ P ++ + GG+A + L N Sbjct 106 VDGEVSVVCMCHTRELAFQISKEYERFSKYL--PGVKVAVFFGGMAIKKDEERLANDCPH 163 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 IVVGTPGR+ L +GKL L +V++ VLDE D ++ + R +I ++T K Sbjct 164 IVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDA---DMRRDVQEIVKMTPQQK-- 218 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLG 460 QV++ SATL +++ + ++ M P V + E + V + Sbjct 219 QVMMFSATLPK-ELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAE-------- 269 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K + + + +Q +IF + C+ Sbjct 270 --------------------------------KNRRLLNLLDALEFNQVVIFVKAVKRCE 297 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L Q +Q F + +H ER + FK R L+ TD+ RG+D Sbjct 298 ALHQLLTEQ---------NFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMD 348 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 I V V N +P++ +Y+HR+ R GR GLAI+ V+ E + + R Sbjct 349 IERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDR 402 Score = 78.2 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PEI +A+ + + P+++Q E IP + G DV+ A++G GKT F I + Sbjct 41 SGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTL 100 Query 62 QIV 64 Q + Sbjct 101 QQL 103 >sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54 OS=Dictyostelium discoideum OX=44689 GN=helA PE=3 SV=1 Length=1091 Score = 292 bits (748), Expect = 2e-84, Method: Composition-based stats. Identities = 108/424 (25%), Positives = 186/424 (44%), Gaps = 44/424 (10%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-- 285 F + L LK ++ F P ++ DG+ + + T +P Sbjct 232 FQSMDLTKNLLKAIL-KKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQ 290 Query 286 ---------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 +A+I+ P+RELA QT +K F + +LR +LI+GG + DQ + L Sbjct 291 KLGDHSTTVGVRAVILSPTRELAIQTFKVVKDFSQ---GTQLRTILIVGGDSMEDQFTDL 347 Query 337 ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 DI++ TPGRL + ++LS+V+++V DEAD L G+++ + + +++ Sbjct 348 ARNPDIIIATPGRLMHHLLETGMSLSKVQYIVFDEADRLFEMGFNEQLTEILSKL----- 402 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 + Q ++ SATL S V ++ P ++L + + + + T R Sbjct 403 -SENRQTLLFSATLPSLLV-DFVRAGLNNPKLINLDTDTKISENLSLSFF-----TLRHE 455 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 E+LG D+ K P++ + ++ K IIF TK Sbjct 456 EKLGVLLFLLKDIIYK--------KPQLPTTETTTTTTTNNESNQQQQKKSSTIIFVSTK 507 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + + + G + +HG P RK NL +F+ V ++ TD+AA Sbjct 508 YHVEFIHILLERAG---------IASTYIHGYLDPVARKINLAKFRSHQVGVMVVTDLAA 558 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RGIDI + VIN P +++ ++HR+GRV RA R G+A SLV+ ++ + G+ Sbjct 559 RGIDIPLLDNVINFDFPPKEKIFIHRVGRVARAGRSGIAYSLVSPDEVPYMIDLHLYLGR 618 Query 637 GCYN 640 N Sbjct 619 KFLN 622 Score = 100 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 50/103 (49%), Gaps = 7/103 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F M + + +A+ + + +PT IQ +SIP+IL G D++ A TGSGKTGAF IP+IQ Sbjct 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQK 291 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + S + + + F+ G+ Sbjct 292 LGDHS-------TTVGVRAVILSPTRELAIQTFKVVKDFSQGT 327 >sp|Q6FL17|SUB2_CANGA ATP-dependent RNA helicase SUB2 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=SUB2 PE=3 SV=1 Length=439 Score = 277 bits (708), Expect = 2e-84, Method: Composition-based stats. Identities = 96/410 (23%), Positives = 160/410 (39%), Gaps = 62/410 (15%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 G L +A G + K+ + + Q +P +++ +RELA Q N +F Sbjct 88 QSIHGTDVLCQAKSG-LGKTAVFVLSTLQQLDPVPGEVSVVVICNARELAYQIRNEYLRF 146 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENG---VDIVVGTPGRLDDLVSTGKLNLSQVRF 366 KY+ P +R + GG +L+N IVV TPGRL LV ++LS V+ Sbjct 147 SKYM--PDVRTAVFYGGTPIAKDAELLKNKDTAPHIVVATPGRLKALVRDKMIDLSHVKN 204 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 V+DE D +L + R +I + T K QV++ SATL S +++ + + + P Sbjct 205 FVIDECDKVLE---ELDMRRDVQEIFRATPRDK--QVMMFSATL-SQEIRPICRRFLQNP 258 Query 427 TWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + + E + + + + Sbjct 259 LEIFVDDEAKLTLHGLQQYYIKLEERE--------------------------------- 285 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 K + + + + +Q IIF ++ + L + F + + Sbjct 286 -------KNRKLAQLLDDLEFNQVIIFVKSTSRANELTKLL---------NASNFPAITV 329 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG K ER + FK + R + TDV RGIDI + IN L +E Y+HR+GR Sbjct 330 HGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLLNEADQYLHRVGR 389 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE 655 GR GLAIS V+ ++++ R +E + + N Sbjct 390 AGRFGTKGLAISFVSNKEDEEVLSKIQERFDVKIAEFPEEGIDPSTYLNN 439 Score = 75.9 bits (185), Expect = 3e-13, Method: Composition-based stats. Identities = 30/144 (21%), Positives = 56/144 (39%), Gaps = 24/144 (17%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+++A+ + + P+++Q +IP + G DVL A++G GKT F + + Sbjct 55 TGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTL 114 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI-----------GSDGLC 110 Q + D G+ I + + F+ G + Sbjct 115 QQL-----DPVPGEVSVVVICNA----RELAYQIRNEYLRFSKYMPDVRTAVFYGGTPIA 165 Query 111 CQSREVKEW----HGCRATKGLMK 130 + +K H AT G +K Sbjct 166 KDAELLKNKDTAPHIVVATPGRLK 189 >sp|A1A4H6|DDX27_BOVIN Probable ATP-dependent RNA helicase DDX27 OS=Bos taurus OX=9913 GN=DDX27 PE=2 SV=1 Length=765 Score = 286 bits (732), Expect = 3e-84, Method: Composition-based stats. Identities = 101/520 (19%), Positives = 193/520 (37%), Gaps = 78/520 (15%) Query 205 FSKN--GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + +N +D+ L+ + + ++ A + A + Sbjct 183 YDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGL--------LGKDICACAATG 234 Query 263 DGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 G ++ + L++ P+REL Q + KQ ++ + L Sbjct 235 TGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCS---ITTCL 291 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYS 381 +GG+ + Q + L DI++ TPGRL D + + +LS + L+LDEAD +L + + Sbjct 292 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 351 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + + + Q ++ SAT+ +VK L+ + P + + V + Sbjct 352 EQMKEIIRMC------SHHRQTMLFSATMTD-EVKDLASVSLKNPVRIFVNSNTDVAPFL 404 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + + P + E + + + Sbjct 405 RQEFIRIRPNREGDREAIVAA-------------------------------------LL 427 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 D ++F +TK + G LHG+ +R + L RF Sbjct 428 MRTFTDHVMLFTQTKKQAHRMHILLGLMG---------LQVGELHGNLSQTQRLEALRRF 478 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 K + L+ TDVAARG+DI GV VIN T+P+ ++YVHR+GR RA R G ++SLV Sbjct 479 KDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGE 538 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 E+ K+ + + K R+ + ++++ + + V +++ Sbjct 539 EERKMLKEIVKA-AKAPVKARILPQDVILKFRDKIEKMEK----------DVYAVLQLEA 587 Query 682 DEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKE 721 +E + + + Q A KG + ++E Sbjct 588 EEKEMQKSEAQINTAQRLLEKGKEAPNPEPERSWFQTKEE 627 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 28/123 (23%), Positives = 52/123 (42%), Gaps = 9/123 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + +A+ M + PT IQ IP+ L G D+ A TG+GKT AF++PV++ Sbjct 188 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 247 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY---DRGSAFAIGSDGLCCQSREVKEW 119 + ++ T + + + + + F + L +VK Sbjct 248 RLIYKP------RQAPVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQ 301 Query 120 HGC 122 Sbjct 302 EAA 304 >sp|Q9FZ92|RH44_ARATH Putative DEAD-box ATP-dependent RNA helicase 44 OS=Arabidopsis thaliana OX=3702 GN=RH44 PE=5 SV=2 Length=622 Score = 282 bits (722), Expect = 3e-84, Method: Composition-based stats. Identities = 92/412 (22%), Positives = 161/412 (39%), Gaps = 70/412 (17%) Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-----APKALIVEPS 295 N+ E + + +S G A +++ + P AL++ P+ Sbjct 236 NWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVMVPT 295 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS 355 RELA Q +F +Y+ + + I G + Q L G +IV+ TPGRL D + Sbjct 296 RELAHQIEEETVKFSRYLG---FKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLE 352 Query 356 TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR-----------LQVI 404 + L+Q +LVLDEAD ++ + ++ + + +P ++ Sbjct 353 RRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTTY 412 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT+ V++L+ K + P V + + V+ Sbjct 413 MFSATML-LSVERLARKFLRNPVVVTIG---ETTKFITQQVI------------------ 450 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 M E+ K + + + + + K AI+F T+ D + + Sbjct 451 -------------------MTKESDKFSRLKKLIDDLGDDKT--AIVFVNTRNKVDYIVK 489 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G LH + +R +LE FKK L+ TDV RG+DI + Sbjct 490 NLEKVGRC--------RVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDL 541 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 VIN +P+ Y HRIGR GRA + G+A + + E + V+Y + + Sbjct 542 AQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKLNE 593 Score = 67.5 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (39%), Gaps = 4/95 (4%) Query 30 AESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLN 89 E+IPL L DV+ + TGSGKT AF +P++ + L +E + + Sbjct 238 EETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISR-LPPMREENQTEGPYALVMVPTR 296 Query 90 KWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRA 124 + + F+ L ++ + W Sbjct 297 ELAHQIEEETVKFSRY---LGFKAVSITGWESIEK 328 >sp|Q9ZRZ8|RH28_ARATH DEAD-box ATP-dependent RNA helicase 28 OS=Arabidopsis thaliana OX=3702 GN=RH28 PE=2 SV=1 Length=789 Score = 287 bits (733), Expect = 3e-84, Method: Composition-based stats. Identities = 111/425 (26%), Positives = 177/425 (42%), Gaps = 61/425 (14%) Query 262 PDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 G ++ A + LI+ P+RELA Q + I+ ++ D ++ Sbjct 214 GSGKTAAFALPTLERLLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTD---IKCG 270 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGY 380 LI+GG++ R+Q VL + DIVV TPGR+ D + ++ ++L + L+LDEAD LL G+ Sbjct 271 LIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGF 330 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 + I + P KR Q ++ SAT+ + +VK+L + ++ P + P Sbjct 331 ATEITELVRLCP------KRRQTMLFSATM-TEEVKELVKLSLNKPLRLSADPSARRPPG 383 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + VV + + E + + Sbjct 384 LTEEVVRIRRTREANQEAV-------------------------------------LLSL 406 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + IIF TK L+ F G LHG+ +R +LE Sbjct 407 CTRTFKSKVIIFSGTKQAAHRLKILFGLAG---------LKAAELHGNLTQAQRLDSLEL 457 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+K +V FLI TDVAARG+DI GV VIN P E +YVHR+GR RA R G A++ V Sbjct 458 FRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVT 517 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVP 680 + + G + + E Q++ E+E+ + IS + + Sbjct 518 DSDRSLLKVIAKKVGSKLKSRVIPEQSIVKW----SQIIDEMEDQYSAVISAERDERALR 573 Query 681 VDEFD 685 E + Sbjct 574 KAEME 578 Score = 104 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 33/123 (27%), Positives = 53/123 (43%), Gaps = 9/123 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E+ + + +A E + + PT IQA IPL L G D+ +A TGSGKT AF++P ++ Sbjct 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD---GLCCQSREVKEW 119 + K + T + + + + A +D GL V+E Sbjct 228 RLLFRPK------RVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQ 281 Query 120 HGC 122 Sbjct 282 EVV 284 >sp|Q75C39|DBP5_EREGS ATP-dependent RNA helicase DBP5 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP5 PE=3 SV=2 Length=466 Score = 277 bits (709), Expect = 3e-84, Method: Composition-based stats. Identities = 107/461 (23%), Positives = 184/461 (40%), Gaps = 78/461 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ ++LGLA E+ + ++ L +A S++ G Sbjct 77 KSFEELGLAPELLKGLYAMKFQKPSKIQERALPLLLHNPP------RNMIAQSQSGTGKT 130 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + +++ A +A+ + PSRELA QTL I++ K+ K+ LI+ Sbjct 131 AAFSLT---MLSRVDVAVPATQAICLAPSRELARQTLEVIQEMGKF---TKIASQLIVPD 184 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFIN 385 +++ I+VGTPG + DL+ + L +V+ VLDEAD +L QG D Sbjct 185 SYEKNKAI----NAHIIVGTPGTVLDLMRRKMIQLGKVKTFVLDEADNMLDKQGLGDQCI 240 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 R+ +P K Q+++ SAT V++ + +++ ++L+ + + + Sbjct 241 RVKKFLP------KDTQLVLFSATF-DDSVREYARRVVPNANSLELQRNEVNVSAIKQLF 293 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + N + + +L Y + I Sbjct 294 MDCNDERHKFT----------------------------------VLCDLYGLLTI---- 315 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IIF +TK + L ++G LHGD + +R + + F++G Sbjct 316 -GSSIIFVQTKQTANMLYTELKREG---------HQVSILHGDLQSADRDRLIGDFREGR 365 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAISLV 619 + LI T+V ARGIDI V V+N LP + YVHRIGR GR R G+AIS + Sbjct 366 SKVLITTNVLARGIDIPTVSMVVNYDLPMTANGQPDPSTYVHRIGRTGRFGRTGVAISFI 425 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 +K S T++ D + ++L Sbjct 426 HDKKSYETLAAIQSYFGDIQITKVPTDDMDEMEKIVKKVLK 466 Score = 86.7 bits (213), Expect = 1e-16, Method: Composition-based stats. Identities = 27/129 (21%), Positives = 60/129 (47%), Gaps = 4/129 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ PE+ + + M + P+ IQ ++PL+L +++ +++G+GKT AFS+ Sbjct 76 VKSFEELGLAPELLKGLYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSL 135 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V + Q + ++ +M + + ++ I D + + Sbjct 136 TMLSRVDVAVPATQAICLAPSRELARQTLEVIQEMGKFTKIASQLIVPD--SYEKNKAIN 193 Query 119 WHGCRATKG 127 H T G Sbjct 194 AHIIVGTPG 202 >sp|A7TLA0|SUB21_VANPO ATP-dependent RNA helicase SUB2-1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=SUB2-1 PE=3 SV=1 Length=441 Score = 277 bits (707), Expect = 3e-84, Method: Composition-based stats. Identities = 97/415 (23%), Positives = 160/415 (39%), Gaps = 71/415 (17%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY---------IVKSQHSGNAQVTQTKF 282 L EL + F+ P + + ++ G + K+ + + Q Sbjct 62 FLLKPELARAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDP 121 Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG--- 339 +P +++ +RELA Q N +F KY+ P ++ + GG +L+N Sbjct 122 VPGEVSVVVICNARELAYQIRNEYLRFSKYM--PDVKTAVFYGGTPINKDAELLKNKETA 179 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 IVV TPGRL LV ++LS V+ V+DE D +L + R I + T K Sbjct 180 PHIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLE---ELDMRRDVQDIFRATPRDK 236 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWER 458 QV++ SATL S +++ + + + P + + E + + Sbjct 237 --QVMMFSATL-SEEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYTKLQENE------ 287 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 K + + + + +Q IIF ++ Sbjct 288 ----------------------------------KNRKLAQLLDDLEFNQVIIFVKSTKR 313 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 + L + + F + +HG K ER + FK+ + R + TDV RG Sbjct 314 ANELTKLLNE---------SNFPAITVHGHMKQAERIARYKAFKEFEKRICVSTDVFGRG 364 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV-ATEKEKVWYHVCS 632 IDI + IN L E Y+HR+GR GR GLAIS V + E E+V + Sbjct 365 IDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSSPEDEEVLGKIQE 419 Score = 76.3 bits (186), Expect = 3e-13, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 45/103 (44%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + PE+A+A+ + + P+++Q +IP + G DVL A++G GKT F + + Sbjct 57 TGFKDFLLKPELARAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTL 116 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + D G+ I + + F+ Sbjct 117 QQL-----DPVPGEVSVVVICNA----RELAYQIRNEYLRFSK 150 >sp|A5E6W6|RRP3_LODEL ATP-dependent rRNA helicase RRP3 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=RRP3 PE=3 SV=1 Length=504 Score = 278 bits (712), Expect = 3e-84, Method: Composition-based stats. Identities = 105/442 (24%), Positives = 178/442 (40%), Gaps = 71/442 (16%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP---------NA 286 EL + ++ P A+ A G + + T +P Sbjct 107 PELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQP 166 Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 AL++ P+RELA Q + LR + IIGG++ +Q L +++ T Sbjct 167 YYALVLAPTRELAFQIKETFDALG---SSMGLRSVCIIGGMSMMEQARDLMRKPHVIIAT 223 Query 347 PGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 PGRL D + T +L ++++LV+DE D ++ Y+ I+++ QIP + + Sbjct 224 PGRLIDHLEHTKGFSLKKLQYLVMDEVDRMIDLDYAKAIDQILKQIP-----SHQRITYL 278 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 +AT+ S +++K ++ ++ P V++ + VPD + + +P T Sbjct 279 YTATM-SREIEKF-KRSLNSPVQVEIVKLEKVPDKLKQTMCLTSPNT------------- 323 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 K ++ + M + IIF RT + Sbjct 324 ---------------------------KDTRLIQIVNLDSMKRVIIFTRTVVHTRRCCLM 356 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G F CV LHG R + +FK G L+ TDVAARG+DI V Sbjct 357 LLNLG---------FKCVELHGQMPQSRRLGAINKFKAG-TPILVATDVAARGLDIPAVD 406 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VIN +P + Y+HR+GR RA + G AISLV + + + ++ G L Sbjct 407 LVINYDIP-DPTLYIHRVGRTARAGKAGKAISLVTQYDLESYLRIENTLGTKLPKEDLPL 465 Query 646 DGGCTIWYNEMQLLSEIEEHLN 667 D + + + LS+ + L Sbjct 466 DEMQGLQVSVDRALSKAIQMLR 487 Score = 103 bits (257), Expect = 6e-22, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 47/65 (72%), Gaps = 0/65 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F+E ++PE+ ++++ + + PT IQA +IP L G D++ AETGSGKT AF+IP+ Sbjct 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPI 156 Query 61 IQIVY 65 +Q +Y Sbjct 157 LQTLY 161 >sp|A3GH91|DBP5_PICST ATP-dependent RNA helicase DBP5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP5 PE=3 SV=2 Length=500 Score = 278 bits (712), Expect = 3e-84, Method: Composition-based stats. Identities = 104/471 (22%), Positives = 186/471 (39%), Gaps = 82/471 (17%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + K+ ++LGL E+ + ++ L + Sbjct 102 PNSPLFSVKSFEELGLTPELLKGLYAMKFNKPSKIQEKALPLLISNPP------RNMIGQ 155 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S++ G + +++ + + L + P+RELA QTL I K+ + + Sbjct 156 SQSGTGKTAAFSLT---MLSRVDPKVPSTQCLCLAPTRELARQTLEVISTMGKFTN---I 209 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS- 377 LI+ R I+VGTPG + DL+ ++N++ V+ VLDEAD +L Sbjct 210 TTQLIVPDALPRGS----STNAHIIVGTPGIVMDLIRRKQINVNGVKVFVLDEADNMLDA 265 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 QG D R+ +P+ T Q+++ SAT + V++ +EK + ++LK E+ Sbjct 266 QGLGDQCVRVKRTLPKTT------QLVLFSATFPT-KVRQYAEKFVPNANSLELKQEELN 318 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 D + + + + + + ++L Y Sbjct 319 VDGIKQLYMDCDSEKHKF----------------------------------EVLCELYG 344 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 + I +IIF K + L +G +C LHG + ER + Sbjct 345 LLTI-----GSSIIFVERKDTANLLYAKMKAEG---------HACSILHGGLETSERDRL 390 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHRIGRVGRAER 611 ++ F++G + LI T+V ARGIDI V V+N LP + Y+HRIGR GR R Sbjct 391 IDDFREGRSKVLITTNVLARGIDIASVSMVVNYDLPTDKDGNADPSTYLHRIGRTGRFGR 450 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 +G++IS + ++ TR+ D W +++ ++ Sbjct 451 VGVSISFIYDKRSYEILMKIKDYFGNVEMTRVPTD----DWDEVEKIVKKV 497 Score = 92.1 bits (227), Expect = 4e-18, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 4/130 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ PE+ + + M + P+ IQ +++PL++ +++ +++G+GKT AFS+ Sbjct 109 VKSFEELGLTPELLKGLYAMKFNKPSKIQEKALPLLISNPPRNMIGQSQSGTGKTAAFSL 168 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V + Q T ++ M + + I D L S Sbjct 169 TMLSRVDPKVPSTQCLCLAPTRELARQTLEVISTMGKFTNITTQLIVPDALPRGSST--N 226 Query 119 WHGCRATKGL 128 H T G+ Sbjct 227 AHIIVGTPGI 236 >sp|Q6CJV1|DRS1_KLULA ATP-dependent RNA helicase DRS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DRS1 PE=3 SV=1 Length=748 Score = 285 bits (729), Expect = 4e-84, Method: Composition-based stats. Identities = 88/439 (20%), Positives = 168/439 (38%), Gaps = 64/439 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K L L+ + + + +++A + +A + G Sbjct 233 KTFNSLSLSRPVLKGLGSLGYTSPSPIQSAAIPIAL--------LGKDIIAGAVTGSGKT 284 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + + +++ P+RELA Q + K K+++ L L +GG Sbjct 285 AAFMIPIIERLLYKPAHIASTRVVVLTPTRELAIQVADVGKNIGKFVNG--LTFGLAVGG 342 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + R Q L+ DIV+ TPGR D + ++ ++ V LV+DEAD +L +G+ + + Sbjct 343 LNLRQQEQALKTRPDIVIATPGRFIDHLRNSASFSVDSVEILVIDEADRMLEEGFQEELQ 402 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + + IP + Q ++ SAT++S +K+L + P + + D + Sbjct 403 EIMSLIP------SKRQTLLFSATMNS-KIKQLISLSLKKPVRIMIDPPKQAADKLTQEF 455 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + + L + +R + Sbjct 456 IRIRKRDHLKPALLYQ-----------------------------------LIRKLDNTS 480 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + ++F K L G LHG +R Q++ FK Sbjct 481 QKRIVVFVARKETAHKLRIVLGLLG---------MQVGELHGSLTQEQRLQSVNNFKSLQ 531 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV--ATEK 623 V LICTD+A+RG+DI + VIN +P + Y+HR+GR RA R G +++ V +++ Sbjct 532 VPVLICTDLASRGLDIPKIEVVINFDMPKTYEIYLHRVGRTARAGREGRSVTFVGESSQD 591 Query 624 EKVWYHVCSSRGKGCYNTR 642 + S + + + Sbjct 592 RSIVRSAIRSVEENAESGK 610 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 6/108 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+ + + + + + + + P+ IQ+ +IP+ L G D++ A TGSGKT AF IP+I Sbjct 233 KTFNSLSLSRPVLKGLGSLGYTSPSPIQSAAIPIALLGKDIIAGAVTGSGKTAAFMIPII 292 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + +T + + + D G +GL Sbjct 293 ERLLYKPAHI------ASTRVVVLTPTRELAIQVADVGKNIGKFVNGL 334 >sp|Q2UQI6|DRS1_ASPOR ATP-dependent RNA helicase drs1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=drs1 PE=3 SV=2 Length=820 Score = 287 bits (733), Expect = 4e-84, Method: Composition-based stats. Identities = 110/482 (23%), Positives = 193/482 (40%), Gaps = 70/482 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ ++ L+ I + ++ + V + G Sbjct 302 KSFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVAL--------LGKDIVGSAVTGSGKT 353 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + I+ P+RELA Q N + Y D + ++GG Sbjct 354 AAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTD---ITFCQLVGG 410 Query 327 VAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + R+Q ++L+ D+++ TPGR +D + ++ + + LVLDEAD +L G++D +N Sbjct 411 FSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELN 470 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IP K Q ++ SAT+ V KL ++ P + + + + + Sbjct 471 EILTTIP------KSRQTMLFSATMTD-SVDKLIRVGLNRPVRLMVDSKKNTSMNLIQEF 523 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + P R +RLG Y + KE Sbjct 524 VRLRP--GREDKRLG-----------------------------------YLLHLCKEVY 546 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + I+F R K + + F G LHG +R +++E F++G Sbjct 547 TGRVIVFFRQKKEAHRVRIAFGLLG---------LKAAELHGSMSQEQRIRSVENFREGK 597 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V FL+ TD+AARG+DI GV VIN P + Y+HR+GR RA R G A ++ A K Sbjct 598 VSFLLATDLAARGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRK 657 Query 626 VWY-HVCSSRGKGCY-NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 V V +S+ +G +R+ + W Q ++EE +N + + + + ++ E Sbjct 658 VVKAAVKASKAQGAKVASRVVDPAVADRW---AQKAKDLEEEINAVLEEEKIEKQLAQAE 714 Query 684 FD 685 Sbjct 715 MQ 716 Score = 107 bits (268), Expect = 8e-23, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 54/111 (49%), Gaps = 6/111 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P++ Sbjct 302 KSFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL 361 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 + + +K T+ + + Y+ + A +D CQ Sbjct 362 ERLLFRP------RKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQ 406 >sp|Q6FKN8|DBP5_CANGA ATP-dependent RNA helicase DBP5 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP5 PE=3 SV=1 Length=504 Score = 278 bits (712), Expect = 4e-84, Method: Composition-based stats. Identities = 112/462 (24%), Positives = 183/462 (40%), Gaps = 78/462 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ +LGL+ E+ + ++ L +A S++ G Sbjct 114 KSFDELGLSPELLKGIYAMKFQKPSKIQERALPLLLSNPP------RNMIAQSQSGTGKT 167 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + +++ N P+A+ + PSRELA QTL I++ KY K+ LI+ Sbjct 168 AAFSLT---MLSRVDETQNVPQAICLAPSRELARQTLEVIQEMGKY---TKITTQLIVPD 221 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFIN 385 ++ + ++VVGTPG L DL+ + L V+ VLDEAD +L QG D Sbjct 222 SFEKNT----KINANVVVGTPGTLLDLIRRKLIQLQNVKIFVLDEADNMLDKQGLGDQCI 277 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 R+ +P K Q+++ SAT VK ++K++ ++L+ + + + Sbjct 278 RVKKFLP------KDTQLVLFSATFADA-VKAYAQKVIPNANTLELQRNEVNVKAIKQLY 330 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + N + + ++L Y + I Sbjct 331 MDCNDEAHK----------------------------------YEVLCELYGLLTI---- 352 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IIF K + L +G LH D + ER + ++ F++G Sbjct 353 -GSSIIFVAKKDTANLLYGKLKHEG---------HQVSILHSDLRTDERDRLIDDFREGR 402 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHRIGRVGRAERMGLAISLV 619 + LI T+V ARGIDI V V+N LP + YVHRIGR GR R G+AIS V Sbjct 403 SKVLITTNVLARGIDIPSVSMVVNYDLPTLPNGMPDYATYVHRIGRTGRFGRTGVAISFV 462 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 +K K TR+ D + ++L + Sbjct 463 HDKKSFKILSAIQDYFKDIELTRVPTDDWDEVEDIVKKVLKQ 504 Score = 92.5 bits (228), Expect = 3e-18, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 2/116 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ PE+ + + M + P+ IQ ++PL+L +++ +++G+GKT AFS+ Sbjct 113 VKSFDELGLSPELLKGIYAMKFQKPSKIQERALPLLLSNPPRNMIAQSQSGTGKTAAFSL 172 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 ++ V ET Q + ++ +M Y + + I D ++ Sbjct 173 TMLSRVDETQNVPQAICLAPSRELARQTLEVIQEMGKYTKITTQLIVPDSFEKNTK 228 >sp|A3LQ55|PRP5_PICST Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=PRP5 PE=3 SV=2 Length=875 Score = 288 bits (736), Expect = 5e-84, Method: Composition-based stats. Identities = 99/425 (23%), Positives = 174/425 (41%), Gaps = 59/425 (14%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA--PKALIVEPSRELAEQTLN 304 + ++K G + + L + P LI+ P+RELA Q Sbjct 305 PAIMSGRDIIGVAKTGSGKTLSFVLPMLRHIQDQPDLKDGEGPIGLILSPTRELAVQIHK 364 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNL 361 I F K + + GG Q++ L+ G I+VGTPGR+ +L++ NL Sbjct 365 EITNFTKRLG---MTACCCYGGSPIESQIAELKKGAQILVGTPGRIIELLAANSGRITNL 421 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 +V ++VLDEAD + G+ + ++ +QI Q ++ SAT ++ L+++ Sbjct 422 RRVTYVVLDEADRMFDLGFEPQVTKISSQI------RPESQTVLFSATFP-RKIELLAKR 474 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 +++ P + + G V + V S Sbjct 475 LLYNPLEIIVGGISVVASEITQKV----------------------------ELFEKGES 506 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 ++ E L V +I E K + +IF + D+L + G Sbjct 507 SQLEDEKFDRLLNILNVFSI-ESKHSKVLIFVEKQSAADDLLVKLL---------GSNHP 556 Query 542 CVCLHGDRKPHERKQNLERF--KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 C+ +HG + +RK ++ F K V LI T +AARG+D+ G+ VIN P+ ++Y Sbjct 557 CLTIHGGKDQIDRKYAIKEFSSKDSGVDILIATSIAARGLDVKGLDLVINYDPPNHMEDY 616 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 VHR+GR GRA G AI+ V++++E+ + + +++ ED + Sbjct 617 VHRVGRTGRAGMKGTAITFVSSDQERSVTDLV----RAMTMSKIPEDEIPSRLIEIRNQF 672 Query 660 SEIEE 664 E + Sbjct 673 LEKVK 677 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 57/112 (51%), Gaps = 5/112 (4%) Query 1 MAAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S +G+ +E ++++ PT IQ++++P I+ G D++ A+TGSGKT +F +P Sbjct 271 VLKWSHLGLPASYMNIIEDKLEYKAPTSIQSQALPAIMSGRDIIGVAKTGSGKTLSFVLP 330 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 +++ + DQ + K G+ I S + + + + F C Sbjct 331 MLRHIQ----DQPDLKDGEGPIGLILSPTRELAVQIHKEITNFTKRLGMTAC 378 >sp|Q8SR63|RRP3_ENCCU ATP-dependent rRNA helicase RRP3 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=RRP3 PE=3 SV=1 Length=400 Score = 275 bits (702), Expect = 5e-84, Method: Composition-based stats. Identities = 92/418 (22%), Positives = 162/418 (39%), Gaps = 64/418 (15%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 +A+S+ G + + + Q + L+V P+REL+ Q F+ Sbjct 42 IAVSQTGSGKTLAFVLPIVSHLLQ---KNRSFYCLVVAPTRELSSQIAECFNMFQA---- 94 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQVRFLVLDEADG 374 LR L++GG Q + L +VVGTPGR+ ++ T +VR VLDEAD Sbjct 95 TGLRVCLLVGGANFNVQANQLSKRPHVVVGTPGRIAEHVLKTKSFRTERVRKFVLDEADR 154 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 Q + + + + + S ++ Q ++ +AT+ S ++ KLS I+ P + + Sbjct 155 FFEQDFVEDLETI------IPSLREKRQTLLFTATM-SDEISKLSSSILKRPKTIRTAEK 207 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + + V K K Sbjct 208 YETVPALKEYYLFVAMK----------------------------------------WKN 227 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 V ++ + I+F + + + G F LHG+ +R Sbjct 228 SALVELLEMSQGMSVIVFVSMCVTARVMSLALARLG---------FCSEALHGELSQEKR 278 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 ++ + FK+ L+CTD+ +RG+DI V VIN +P ++Y+HR+GR RA R G Sbjct 279 EEAMRSFKESRFNVLVCTDLGSRGLDISHVDLVINFDVPKSGKDYIHRVGRTARAGRSGT 338 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 AI+LV + + + K ++ + TI + + E +E L + Sbjct 339 AITLVTQYDVEQIQKIEFTLEKKLEEFKMMKKNFGTICARIEEAIQEAQETLKEERKR 396 Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 50/107 (47%), Gaps = 9/107 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + +E PT++Q + IP +LGGGDV+ ++TGSGKT AF +P++ Sbjct 3 FGDLRIDESLIKTCQEKGITRPTEVQRQVIPAVLGGGDVIAVSQTGSGKTLAFVLPIVSH 62 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 + + K ++ + + + + F +C Sbjct 63 LLQ---------KNRSFYCLVVAPTRELSSQIAECFNMFQATGLRVC 100 >sp|Q5B3H7|DBP8_EMENI ATP-dependent RNA helicase dbp8 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp8 PE=3 SV=1 Length=525 Score = 279 bits (713), Expect = 5e-84, Method: Composition-based stats. Identities = 114/481 (24%), Positives = 182/481 (38%), Gaps = 74/481 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 K L +A + + A+ ++ A + + + S+ G + Sbjct 97 FKALNVAPWLVGSLTTMAVRKPTAIQRACIP--------EILKGRDCIGGSRTGSGKTIA 148 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + P A+I+ P+RELA Q IK ++ +LI GG Sbjct 149 FSVPI---LQKWAEDPFGIFAVILTPTRELALQIFEQIKAISA---PQSMKPVLITGGTD 202 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFI 384 R Q L +VV TPGRL D ++T + L +VR +VLDEAD LLS G + Sbjct 203 MRSQAIELAGRPHVVVATPGRLADHINTSGTDTVAGLKRVRMVVLDEADRLLSPGPGSML 262 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE------KIMHFPTWVDLKGEDSVP 438 + + + + Q ++ +ATL +V+ L K F T + + +D+VP Sbjct 263 PDVETCLSFLPGPSQ-RQTLLFTATLTP-EVRALKSMPQTPGKPPIFVTEISTEAKDTVP 320 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 T+ V V L R H+ + Sbjct 321 PTLRTTYVQVP-----LTHREAFLHV---------------------------------L 342 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + + + AI+F T D LE+ G LH ER NL Sbjct 343 LSTESNITKSAIVFTNTTKSADLLERLLRSLG---------HRVTSLHSLLPQSERNSNL 393 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 RF+ R L+ TDVA+RG+DI V V+N +P +YVHR+GR RA R G A++L Sbjct 394 ARFRASAARVLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVHRVGRTARAGRTGEAVTL 453 Query 619 VATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIK 678 V ++ + G+ +E + LL E+ + +++ Sbjct 454 VGQRDVQLVLAIEERIGRKMVEYE-EEGVNLEARVAKGSLLKEVGAAKREAMVEIDEGRD 512 Query 679 V 679 V Sbjct 513 V 513 Score = 98.3 bits (243), Expect = 3e-20, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 20/156 (13%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + V P + ++ M PT IQ IP IL G D + + TGSGKT AFS+P++Q Sbjct 96 SFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPILQ 155 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLCCQ 112 E + + + +++ A + G + Q Sbjct 156 KWAE---------DPFGIFAVILTPTRELALQIFEQIKAISAPQSMKPVLITGGTDMRSQ 206 Query 113 SREVK-EWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 + E+ H AT G + + GL RV Sbjct 207 AIELAGRPHVVVATPGRLADHINTSGTDTVAGLKRV 242 >sp|Q96GQ7|DDX27_HUMAN Probable ATP-dependent RNA helicase DDX27 OS=Homo sapiens OX=9606 GN=DDX27 PE=1 SV=2 Length=796 Score = 286 bits (731), Expect = 5e-84, Method: Composition-based stats. Identities = 99/520 (19%), Positives = 196/520 (38%), Gaps = 78/520 (15%) Query 205 FSKN--GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + +N +D+ L+ + + ++ A + A + Sbjct 214 YDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGL--------LGKDICACAATG 265 Query 263 DGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 G ++ + L++ P+REL Q + +Q ++ + + L Sbjct 266 TGKTAAFALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCN---ITTCL 322 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYS 381 +GG+ + Q + L DI++ TPGRL D + + +LS + L+LDEAD +L + + Sbjct 323 AVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFE 382 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + + + Q ++ SAT+ +VK L+ + P + + V + Sbjct 383 EQMKEIIRMC------SHHRQTMLFSATMTD-EVKDLASVSLKNPVRIFVNSNTDVAPFL 435 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + + P + E + + + Sbjct 436 RQEFIRIRPNREGDREAIVAA-------------------------------------LL 458 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 D ++F +TK + G LHG+ +R + L RF Sbjct 459 TRTFTDHVMLFTQTKKQAHRMHILLGLMG---------LQVGELHGNLSQTQRLEALRRF 509 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 K + L+ TDVAARG+DI GV VIN T+P+ ++YVHR+GR RA R G ++SLV Sbjct 510 KDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGE 569 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 ++ K+ + + K R+ + ++++ + + V +++ Sbjct 570 DERKMLKEIVKA-AKAPVKARILPQDVILKFRDKIEKMEK----------DVYAVLQLEA 618 Query 682 DEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKE 721 +E + + + Q A KG ++ + ++E Sbjct 619 EEKEMQQSEAQINTAKRLLEKGKEAVVQEPERSWFQTKEE 658 Score = 105 bits (261), Expect = 6e-22, Method: Composition-based stats. Identities = 28/123 (23%), Positives = 52/123 (42%), Gaps = 9/123 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + +A+ M + PT IQ IP+ L G D+ A TG+GKT AF++PV++ Sbjct 219 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 278 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVKEW 119 + ++ T + + + + + F + L +VK Sbjct 279 RLIYKP------RQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAVGGLDVKSQ 332 Query 120 HGC 122 Sbjct 333 EAA 335 >sp|P21507|SRMB_ECOLI ATP-dependent RNA helicase SrmB OS=Escherichia coli (strain K12) OX=83333 GN=srmB PE=1 SV=1 Length=444 Score = 276 bits (706), Expect = 6e-84, Method: Composition-based stats. Identities = 108/455 (24%), Positives = 170/455 (37%), Gaps = 66/455 (15%) Query 253 DGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA----PKALIVEPSRELAEQTLNNIKQ 308 DG L AP G K+ + P P+ LI+ P+RELA Q ++ ++ Sbjct 40 DGRDVLGSAPTG-TGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARE 98 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 K+ L I GGVA + V DIVV T GRL + + V L+ Sbjct 99 LAKHTH---LDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLI 155 Query 369 LDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 LDEAD +L G++ I + + R Q ++ SATL ++ +E+++ P Sbjct 156 LDEADRMLDMGFAQDIEHIAGE------TRWRKQTLLFSATLEGDAIQDFAERLLEDPVE 209 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 V +H + Sbjct 210 VSANPSTRERKKIHQWYYRADDLEH----------------------------------- 234 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K V +K+ + ++I+F R + L + + G + L G+ Sbjct 235 ----KTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAG---------INNCYLEGE 281 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +R + ++R +G V L+ TDVAARGIDI V +V N +P Y+HRIGR R Sbjct 282 MVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLHRIGRTAR 341 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 A R G AISLV + V + + E T +E Q ++ L Sbjct 342 AGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIDELRPKTRAPSEKQTGKPSKKVLAK 401 Query 669 TISQVEPDI----KVPVDEFDGKVTYGQKRAAGGG 699 + + +V D K +++ +G G Sbjct 402 RAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTG 436 Score = 72.1 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 51/107 (48%), Gaps = 5/107 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FSE+ + + +A+++ + PT IQA +IP L G DVL +A TG+GKT A+ +P Sbjct 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPA 62 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 +Q + + + KK + + M D A + Sbjct 63 LQHLLDFPR-----KKSGPPRILILTPTRELAMQVSDHARELAKHTH 104 >sp|A3LNL1|PRP28_PICST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=PRP28 PE=3 SV=2 Length=482 Score = 277 bits (709), Expect = 6e-84, Method: Composition-based stats. Identities = 97/428 (23%), Positives = 170/428 (40%), Gaps = 60/428 (14%) Query 227 LFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDGYIVKSQHSGNAQVTQTKFL 283 ++ A + + + + G +A YI+ + + Q + Sbjct 77 YLEPTPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIPLLSYILNTDKNYLEYEHQQEQN 136 Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 N P LI+ P+RELA+Q ++F D L + IIGG + + + GV +V Sbjct 137 YNKPLGLILAPTRELAQQITKEAQKFG---DRLGLNVVSIIGGHQYEETVHSIRTGVHVV 193 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS------- 396 V TPGRL D + + L + +L++DEAD ++ G+ + + + +P Sbjct 194 VATPGRLVDSLERNIIGLDKCYYLIMDEADRMIDMGFEKALQSILSYVPSTDRLNSTIDS 253 Query 397 ---DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 K+ ++ +AT+ S ++K+++ + P ++ + G D + + T Sbjct 254 MIFHIKKRITLMFTATI-SPPIEKITKNFLIKPGYLYIGGAGEALDHIVQNFEYLGSATG 312 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ----A 509 SE + + VR I++H + Sbjct 313 -------------------------------GSEDFDSKRFDKLVRIIQQHSRESRQFSI 341 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIF K CD L + G + V +HG + R++ + F+ + R L Sbjct 342 IIFANYKRVCDLLSLELEKNGFRDN--------VVIHGSKTQELREKAISSFRSHESRIL 393 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 I TDVAARGID+ V V+N + + YVHRIGR GRA G + + + V+ Sbjct 394 IATDVAARGIDVPNVSLVVNFQMSRKFDEYVHRIGRTGRAGNRGESYTFIDDSDSDVFID 453 Query 630 VCSSRGKG 637 + G Sbjct 454 LKKFLVNG 461 Score = 97.9 bits (242), Expect = 5e-20, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 8/110 (7%) Query 1 MAAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + ++E + ++ + +++++L PT IQ +IPL L DV+ AETGSGKT AF IP Sbjct 55 LRTWNEASIPSKLLSIIVDKLEYLEPTPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIP 114 Query 60 VIQIVYETLKD------QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 ++ + T K+ QQE K + + + F Sbjct 115 LLSYILNTDKNYLEYEHQQEQNYNK-PLGLILAPTRELAQQITKEAQKFG 163 >sp|A5E058|PRP5_LODEL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=PRP5 PE=3 SV=1 Length=994 Score = 289 bits (740), Expect = 8e-84, Method: Composition-based stats. Identities = 106/494 (21%), Positives = 191/494 (39%), Gaps = 95/494 (19%) Query 224 NQALFPACVLKNAELKFNFGEEEFKFPPK-------DGFVALSKAPDGYIVKSQHSGNAQ 276 Q L P V+ + F + + ++K G + Sbjct 390 GQLLMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRH 449 Query 277 VT-QTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 + Q P P L++ P+RELA Q I +F +D L+ GG +Q+S Sbjct 450 IQDQLFPKPGEGPIGLVLSPTRELALQIEKEILKFSSTMD---LKVCCCYGGSNIENQIS 506 Query 335 VLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 L+ GV+++V TPGRL DL++ L + F+VLDEAD + G+ I ++ QI Sbjct 507 ELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQI 566 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 Q ++ SAT +++L++K++H P + + G V + ++ Sbjct 567 ------RPDKQTVLFSATFP-RKLEQLAKKVLHNPIEIIVGGVSVVASEISQEIILFEDT 619 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + ++ K L+ + + ++ Sbjct 620 DQLMNHKIQK------------------------------LEDILSRFFDLGKNTGKVLV 649 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK--KGDVRFL 569 F + D D L +++ C+ +HG + +RK + F + + L Sbjct 650 FVEKQTDADKLVSVLLKKA---------IPCIAIHGGKDQIDRKHAIREFSDDQSGINVL 700 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 I T +AARG+D+ + V+N P ++YVHR+GR GRA + G AI+ V +EK Sbjct 701 IATSIAARGLDVRNLDLVVNFEPPSHLEDYVHRVGRTGRAGKHGEAITFVDNTQEK---- 756 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVT 689 +S + + L + V+ ++ D+F K+ Sbjct 757 ----------------------------EISILVKALKMSSRAVDSKLQEIADKFMKKIE 788 Query 690 YGQKRAAGGGSYKG 703 G+++ + G KG Sbjct 789 SGEEKRSSGFGGKG 802 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 25/111 (23%), Positives = 55/111 (50%), Gaps = 6/111 (5%) Query 3 AFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + ++ + + + ++ + P+ IQ ++IP++L G D++ A+TGSGKT ++ +P++ Sbjct 388 TWGQLLMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMV 447 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC 111 + + + L K G+ I S + + F+ D +CC Sbjct 448 RHIQDQLFP----KPGEGPIGLVLSPTRELALQIEKEILKFSSTMDLKVCC 494 >sp|P0CQ88|PRP28_CRYNJ Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=PRP28 PE=3 SV=1 Length=738 Score = 283 bits (725), Expect = 1e-83, Method: Composition-based stats. Identities = 99/407 (24%), Positives = 166/407 (41%), Gaps = 71/407 (17%) Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-----APKALIVEPSRELAEQTLNN 305 + ++K G + L + P ALI+ P+RELA+Q Sbjct 351 QNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETE 410 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++F + + + I+GG + +Q L +G +I++ TPGRL D+V L +SQ R Sbjct 411 TRRFALPLG---YKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCR 467 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR---------------LQVIVCSATL 410 ++V+DEAD ++ G+ +N + + +P + SAT+ Sbjct 468 YVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEGEWQGWRVTTLFSATM 527 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 V++L+ K + P V + DTV V V+ + Sbjct 528 PPA-VERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKK---------------- 570 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 + I+IL+ I+F K D + +Y Q G Sbjct 571 --------------KARLIEILRTIGL--------PPPIIVFVNQKKTADMVVKYVQQAG 608 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 S V LH + +R+ L+ + G++ L+ TD+A RGID+ V VIN Sbjct 609 ---------MSGVTLHSGKSQEQREAALQALRDGEISVLVATDLAGRGIDVPDVSLVINW 659 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 + D + YVHRIGR GRA + G+AI+ + + ++V Y + K Sbjct 660 QMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDDDEVMYDLRIEVEKS 706 Score = 98.7 bits (244), Expect = 5e-20, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + E + +I +EE+ + P+ IQ ++IP+ + D++ A+TGSGKT AF IP+ Sbjct 314 LRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPM 373 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + L + + + + FA+ Sbjct 374 LDYI-GHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFAL 416 >sp|P0CQ89|PRP28_CRYNB Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=PRP28 PE=3 SV=1 Length=738 Score = 283 bits (725), Expect = 1e-83, Method: Composition-based stats. Identities = 99/407 (24%), Positives = 166/407 (41%), Gaps = 71/407 (17%) Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-----APKALIVEPSRELAEQTLNN 305 + ++K G + L + P ALI+ P+RELA+Q Sbjct 351 QNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETE 410 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++F + + + I+GG + +Q L +G +I++ TPGRL D+V L +SQ R Sbjct 411 TRRFALPLG---YKCVSIVGGRSVEEQQFALRDGAEIIIATPGRLKDMVDKSILVMSQCR 467 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR---------------LQVIVCSATL 410 ++V+DEAD ++ G+ +N + + +P + SAT+ Sbjct 468 YVVMDEADRMVDLGFEVDLNFILDSMPATFVKPDDSVALQPTKEGEWQGWRVTTLFSATM 527 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 V++L+ K + P V + DTV V V+ + Sbjct 528 PPA-VERLARKYLIKPATVVIGNAGEAVDTVEQRVEFVHGDEKK---------------- 570 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 + I+IL+ I+F K D + +Y Q G Sbjct 571 --------------KARLIEILRTIGL--------PPPIIVFVNQKKTADMVVKYVQQAG 608 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 S V LH + +R+ L+ + G++ L+ TD+A RGID+ V VIN Sbjct 609 ---------MSGVTLHSGKSQEQREAALQALRDGEISVLVATDLAGRGIDVPDVSLVINW 659 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 + D + YVHRIGR GRA + G+AI+ + + ++V Y + K Sbjct 660 QMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDDDEVMYDLRIEVEKS 706 Score = 98.7 bits (244), Expect = 5e-20, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 1/104 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + E + +I +EE+ + P+ IQ ++IP+ + D++ A+TGSGKT AF IP+ Sbjct 314 LRNWRESAIPSQILDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPM 373 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + L + + + + FA+ Sbjct 374 LDYI-GHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRRFAL 416 >sp|A6RC50|DBP5_AJECN ATP-dependent RNA helicase DBP5 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP5 PE=3 SV=1 Length=497 Score = 277 bits (707), Expect = 1e-83, Method: Composition-based stats. Identities = 117/525 (22%), Positives = 220/525 (42%), Gaps = 96/525 (18%) Query 150 STMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNG 209 +T ++ D TD GFGG+ + E++++ + + K+ Sbjct 41 ATKPSAADGQTDGASEGFGGSQLQE---------PEYSVNVKLSDLQADPNNPLYSIKSF 91 Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 ++LGL I + + + ++ L + S++ G Sbjct 92 EELGLHPSILQGLHSMSFRRPSKIQEKALPLLLNNPPAN------MIGQSQSGTGKTAAF 145 Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + +++ + + AP+AL++ PSRELA Q + I+ Y+D KL+ + + Sbjct 146 VLNILSRLDLSPQMELAPQALVLAPSRELARQIVGVIQVMGSYVD--KLKVATAVPMESN 203 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMH 388 R+Q + +VVGTPG + DL+ N ++ +VLDEAD +L QG D R+ Sbjct 204 RNQ----KVEAPVVVGTPGTVMDLIRKRLFNPQHLKVIVLDEADNMLDQQGLGDQCIRVK 259 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 +P K +QV++ SAT V+ + K + LK E+ + + + + Sbjct 260 GLLP------KNIQVVLFSATFPDHVVR-YANKFAPNANQITLKHEELTVEGIKQLYLDC 312 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + K + V+ + Sbjct 313 DSDEH---------------------------------------KFDILVKFYGLLTIGS 333 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 +IIF +T+ +E+ + +G + V L G + +R + +++F++GD + Sbjct 334 SIIFVKTRASAVEIERRMVAEG---------HTVVSLTGGVEGQKRDEIIDKFRQGDAKV 384 Query 569 LICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIGRVGRAERMGLAIS 617 LI T+V ARGID+ V VIN +P+ + Q Y+HRIGR GR R+G+A+S Sbjct 385 LITTNVLARGIDVQTVSMVINYDIPELHAPKATKRIADAQTYLHRIGRTGRFGRVGVAVS 444 Query 618 LVATEKE-KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 VA+++E ++ + K +NT + T ++E++ + + Sbjct 445 FVASKEEWQMLQDI-----KTYFNTEI--QRVNTQDWDEVEEVVK 482 Score = 81.7 bits (200), Expect = 7e-15, Method: Composition-based stats. Identities = 19/66 (29%), Positives = 41/66 (62%), Gaps = 2/66 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSI 58 + +F E+G+ P I Q + M + P+ IQ +++PL+L +++ +++G+GKT AF + Sbjct 88 IKSFEELGLHPSILQGLHSMSFRRPSKIQEKALPLLLNNPPANMIGQSQSGTGKTAAFVL 147 Query 59 PVIQIV 64 ++ + Sbjct 148 NILSRL 153 >sp|Q6CXB7|HAS1_KLULA ATP-dependent RNA helicase HAS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=HAS1 PE=3 SV=1 Length=497 Score = 277 bits (707), Expect = 2e-83, Method: Composition-based stats. Identities = 82/430 (19%), Positives = 159/430 (37%), Gaps = 72/430 (17%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 DL L+ + ++ + + +K G + Sbjct 38 DLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLA--------GKDVLGAAKTGSGKTLAFL 89 Query 271 HSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + KF P N +++ P+RELA Q ++ ++ ++IGG Sbjct 90 IPAIEMLHSLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQT---FGIVIGGANR 146 Query 330 RDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 R + L GV+I++ TPGRL D + +T ++ LV+DEAD +L G+ D + ++ Sbjct 147 RQEADKLMKGVNILIATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQII 206 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGED--SVPDTVHHVV 445 +P + Q ++ SAT + V+ L+ + P ++++ E S D + Sbjct 207 KILP-----NEDRQSMLFSAT-QTTKVEDLARISLRPGPLFINVDSEKDTSTADGLEQGY 260 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + +K ++ Sbjct 261 VVCESDK----------------------------------------RFLLLFSFLKRNQ 280 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + I+F + + + LHG +K +R F + Sbjct 281 KKKVIVFLSSCNSVKYYAELL---------NYIDLPVLELHGKQKQQKRTNTFFEFCNAE 331 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATEKE 624 L+CTDVAARG+DI V ++I PD+ ++Y+HR+GR R + G ++ + + Sbjct 332 RGILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPTEL 391 Query 625 KVWYHVCSSR 634 ++ +++ Sbjct 392 GFLRYLKAAK 401 Score = 103 bits (256), Expect = 9e-22, Method: Composition-based stats. Identities = 28/94 (30%), Positives = 49/94 (52%), Gaps = 5/94 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ + +A+ +M + T +Q +IP +L G DVL AA+TGSGKT AF IP I+ Sbjct 35 SFSDLKLSDGTMKAIGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIE 94 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +++ + G T + + + + Sbjct 95 MLHSLKFKPRNG-----TGVIVITPTRELALQIF 123 >sp|Q4FZF3|DDX49_MOUSE Probable ATP-dependent RNA helicase DDX49 OS=Mus musculus OX=10090 GN=Ddx49 PE=2 SV=1 Length=480 Score = 276 bits (705), Expect = 2e-83, Method: Composition-based stats. Identities = 107/453 (24%), Positives = 177/453 (39%), Gaps = 77/453 (17%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 + +K G ++++ P L++ P+RELA Q Sbjct 34 PAILEGRDCLGCAKTGSGKTAAFVLPILQKLSED---PYGIFCLVLTPTRELAYQIAEQF 90 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST-GKLNLSQVR 365 + K + L++ +I+GG+ Q L +V+ TPGRL D + + N+ +++ Sbjct 91 RVLGKPLG---LKDCIIVGGMDMVAQALELSRKPHVVIATPGRLADHLRSSNTFNMKKIQ 147 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 FLV+DEAD LL QG +DF + + V + R Q ++ SATL +K+L + Sbjct 148 FLVMDEADRLLEQGCTDFTTDLETILAAVPA---RRQTLLFSATLTDT-LKELQGLATNE 203 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P + + + + + + V K Sbjct 204 PFFWEAQATVRTVEQLDQRYLLVPEK---------------------------------- 229 Query 486 SEAIKILKGEYAVRAIKEHKMD----QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 +K Y V ++ + IIF T C L + F Sbjct 230 ------VKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTCQILCMMLRKF---------NFP 274 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 V LH K ER L +FK R LI TDVA+RG+DI V VIN P + Y+H Sbjct 275 TVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIH 334 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R+GR RA R G AI+LV + + + + ++E +Q+L++ Sbjct 335 RVGRTARAGRQGQAITLVTQYDIHLLHAIEEQIKQQLAELVVEEA-------EVLQILTQ 387 Query 662 IEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 + + + E +IK+ FD K +++ Sbjct 388 V------NVVRRECEIKLEASHFDEKKEINKRK 414 Score = 103 bits (256), Expect = 6e-22, Method: Composition-based stats. Identities = 34/142 (24%), Positives = 56/142 (39%), Gaps = 20/142 (14%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MA F+E+G+ + + ++ PT +Q IP IL G D L A+TGSGKT AF +P+ Sbjct 1 MAGFAEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLC 110 +Q + E + + ++ +G + Sbjct 61 LQKLSEDPY---------GIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMV 111 Query 111 CQSREVKEW-HGCRATKGLMKG 131 Q+ E+ H AT G + Sbjct 112 AQALELSRKPHVVIATPGRLAD 133 >sp|Q6BL34|DBP10_DEBHA ATP-dependent RNA helicase DBP10 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP10 PE=3 SV=2 Length=932 Score = 287 bits (734), Expect = 2e-83, Method: Composition-based stats. Identities = 115/475 (24%), Positives = 183/475 (39%), Gaps = 46/475 (10%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-- 285 FP+ L N ++ FK P + + V + T LP Sbjct 99 FPSFGFSKFLLT-NISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVE 157 Query 286 ---------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 +A+I+ PSRELA QT +K+F K LR +++IGG + +Q S + Sbjct 158 KLKSHSPRVGVRAIILSPSRELASQTFKQVKEFSK---GTDLRSIVLIGGDSLEEQFSSM 214 Query 337 ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 D++V TPGR L +L L V ++V DEAD L G+++ +N + +P Sbjct 215 MTNPDVIVATPGRFLHLKVEMELELKTVEYIVFDEADRLFEMGFAEQLNELIAALPSS-- 272 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR-- 454 Q ++ SATL + ++ + P V L E + D + + Sbjct 273 ----RQSLLFSATLPRSLI-DFAKAGLTNPVLVRLDAETKISDQLQMAFFSIKNNEREAS 327 Query 455 ----LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM---- 506 L E + ++V + N E +E K + + Sbjct 328 LLYVLQEVIKLPLASPEEVKRYSDMEKRDNGSEDEAEDENNNKKKRFKFKKERLPPANML 387 Query 507 ---DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 IIF TK + + G + ++G H RKQ L +F+ Sbjct 388 PSKHSTIIFVPTKHHVEYVTTLLKDAG---------YLVSYIYGTLDQHARKQQLYQFRI 438 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G L+ TDVAARGIDI + V+N TLP + ++HR+GR RA G A S+V ++ Sbjct 439 GMTSLLVVTDVAARGIDIPILANVVNYTLPGSSKIFIHRVGRTARAGNSGWAYSIVNEKE 498 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIK 678 + G+ T + E Q + +E ++ T V I Sbjct 499 LPYLLDLELFLGRKVLLTSMHEKK--CEMLKTKQSSNYVEPKVSYTDRLVLGSIP 551 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 26/105 (25%), Positives = 46/105 (44%), Gaps = 7/105 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F G + + + + PT IQ ++IPLI+ DV+ A TGSGKT AF++P+++ Sbjct 98 SFPSFGFSKFLLTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVE 157 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + S + + + F+ G+D Sbjct 158 KLKSHSPRV-------GVRAIILSPSRELASQTFKQVKEFSKGTD 195 >sp|Q921N6|DDX27_MOUSE Probable ATP-dependent RNA helicase DDX27 OS=Mus musculus OX=10090 GN=Ddx27 PE=1 SV=3 Length=760 Score = 283 bits (724), Expect = 2e-83, Method: Composition-based stats. Identities = 108/510 (21%), Positives = 192/510 (38%), Gaps = 76/510 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV- 267 G+ G FE F L LK FK P + G + Sbjct 167 GQAAGGFFEDASEYDKSLSFQDMNLSRPLLK-AITAMGFKQPTPIQKACIPVGLLGKDIC 225 Query 268 --------KSQHSGNAQVTQTKFLPNA---PKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 K+ + + + P + L++ P+REL Q + KQ ++ Sbjct 226 ACAATGTGKTAAFALPVLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCS-- 283 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGL 375 + L +GG+ + Q + L DI++ TPGRL D + + +LS + L+LDEAD + Sbjct 284 -ITTCLAVGGLDVKSQEAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRM 342 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L + + + + + Q ++ SAT+ +VK L+ + P + + Sbjct 343 LDEYFEEQMKEIIRMC------SHHRQTMLFSATMTD-EVKDLASVSLKNPVRIFVNSNT 395 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 V + + + P + E + + Sbjct 396 DVAPFLRQEFIRIRPNREGDREAIVAA--------------------------------- 422 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + D ++F +TK + LHG+ +R Sbjct 423 ----LLMRTFTDHVMLFTQTKKQAHRMH---------ILLGLLGLQVGELHGNLSQTQRL 469 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + L RFK + L+ TDVAARG+DI GV VIN T+P+ ++YVHR+GR RA R G + Sbjct 470 EALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRS 529 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 +SLV E+ K+ + + L +D + + ++E+ + + Q+E Sbjct 530 VSLVGEEERKMLKEIVKAAKAPVKARILPQD----VILKFRDKIEKLEKDVYAVL-QLEA 584 Query 676 DIKVPVDEFDGKVTYGQKRAAGGGSYKGHV 705 + K + + + ++ Q+ A G Sbjct 585 EEK-EMQQSEAQIDTAQRLLAKGKETADQE 613 Score = 105 bits (261), Expect = 5e-22, Method: Composition-based stats. Identities = 28/123 (23%), Positives = 52/123 (42%), Gaps = 9/123 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F +M + + +A+ M + PT IQ IP+ L G D+ A TG+GKT AF++PV++ Sbjct 185 SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLE 244 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY---DRGSAFAIGSDGLCCQSREVKEW 119 + ++ T + + + + + F + L +VK Sbjct 245 RLIYKP------RQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQ 298 Query 120 HGC 122 Sbjct 299 EAA 301 >sp|Q0V1Z7|DRS1_PHANO ATP-dependent RNA helicase DRS1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DRS1 PE=3 SV=1 Length=808 Score = 284 bits (727), Expect = 2e-83, Method: Composition-based stats. Identities = 104/472 (22%), Positives = 178/472 (38%), Gaps = 68/472 (14%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 I + ++ + V ++ G ++ Sbjct 296 IQKGLAAIGFTEPTPIQAKAIPIAM--------QGKDVVGGAETGSGKTAAFLIPILERL 347 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + I P+RELA Q N + + D + L+ GG ++R+Q +L+ Sbjct 348 LYRPKKVPTTRVAIFMPTRELAVQCFNVATKLASFTD---ITFALLAGGFSSREQEVMLK 404 Query 338 NGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 D+V+ TPGR D + +T + + LVLDEAD +L +G+ +N + IP Sbjct 405 TRPDVVIATPGRFIDHMHNTAAFQVEHLEILVLDEADRMLEEGFETQLNEILTTIP---- 460 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 K Q ++ SAT+ S V KL M P + + + + + + Sbjct 461 --KSRQTMLFSATMTST-VDKLIRIGMDKPVRLMVDAKKHTVKGLTQEFIRLR------- 510 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 + + + Y + ++ ++ IIF R K Sbjct 511 ------------------------------QGKEDKRLAYLMYICEKIYTERVIIFFRQK 540 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + + F G LHG+ +R Q +E F+ G +L+ TDVA+ Sbjct 541 KEAHRVRVVFALCG---------LKASELHGNMSQEQRIQAVEAFRSGKSSYLLATDVAS 591 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH-VCSSRG 635 RG+DI V VIN P + Y+HR+GR RA R G A +L A KV V SR Sbjct 592 RGLDIKNVSTVINYEAPQSHEIYLHRVGRTARAGRSGRACTLAAEPDRKVVKQAVKQSRD 651 Query 636 KGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 +G + T + M+ L +E+ + + + + + + + E D K Sbjct 652 QGSKVVSRQVPVEETDRW--MEKLRGLEDEIEDVLKEEKEERTLSITERDLK 701 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 31/107 (29%), Positives = 53/107 (50%), Gaps = 6/107 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F M + I + + + + PT IQA++IP+ + G DV+ AETGSGKT AF IP+ Sbjct 284 IGSFHAMSLSRPIQKGLAAIGFTEPTPIQAKAIPIAMQGKDVVGGAETGSGKTAAFLIPI 343 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 ++ + K K TT + + ++ + A +D Sbjct 344 LERLLYRPK------KVPTTRVAIFMPTRELAVQCFNVATKLASFTD 384 >sp|A5DZX2|DBP5_LODEL ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP5 PE=3 SV=1 Length=511 Score = 277 bits (707), Expect = 2e-83, Method: Composition-based stats. Identities = 105/465 (23%), Positives = 193/465 (42%), Gaps = 79/465 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ ++LGL E+ + ++ L + S++ G Sbjct 116 KSFEELGLKPELLKGLYAMKFNKPSKIQERALPLLISNPP------KNMIGQSQSGTGKT 169 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + +++ AP+ + + P+RELA QTL ++ KY + L++ Sbjct 170 AAFSLT---MLSRVDESIKAPQCICLAPTRELARQTLEVVETMGKY---SNITYQLVVPD 223 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFIN 385 R Q ++VGTPG + DL++ +N+++V+ VLDEAD +L QG +D Sbjct 224 SVPRGQAI----SAQVLVGTPGIVHDLINRKAINVAKVKVFVLDEADNMLDAQGLADTCL 279 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 R+ ++P + Q+++ SAT + +V+K +EK + + LK E+ + + Sbjct 280 RVKKRLP------RDCQLVLFSATFPT-EVRKYAEKFVPNANSLALKQEELNVKGIKQLY 332 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + + ++L Y + I Sbjct 333 MDCKNQEHKF----------------------------------EVLCELYGLLTI---- 354 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IIF K D+L ++G + LHG + +R + ++ F++G Sbjct 355 -GSSIIFVEQKATADSLYLRMKEEG---------HTVSILHGGLEVADRDRLIDDFREGR 404 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHRIGRVGRAERMGLAISLV 619 + LI T+V ARGIDI V V+N LP + Y+HRIGR GR R+G+++S V Sbjct 405 SKVLITTNVLARGIDIATVSMVVNYDLPRTKEGRPDPSTYLHRIGRTGRFGRVGVSVSFV 464 Query 620 ATEKE-KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE 663 A EK+ + ++ G T + D + +++ E + Sbjct 465 ANEKDYQTLKYIAEYFGIEDQMTVVPTDDWDEVEKIVTRVIKEKK 509 Score = 93.3 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 22/74 (30%), Positives = 47/74 (64%), Gaps = 2/74 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ PE+ + + M + P+ IQ ++PL++ +++ +++G+GKT AFS+ Sbjct 115 VKSFEELGLKPELLKGLYAMKFNKPSKIQERALPLLISNPPKNMIGQSQSGTGKTAAFSL 174 Query 59 PVIQIVYETLKDQQ 72 ++ V E++K Q Sbjct 175 TMLSRVDESIKAPQ 188 >sp|Q5AVM1|DBP5_EMENI ATP-dependent RNA helicase dbp5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp5 PE=3 SV=1 Length=477 Score = 275 bits (704), Expect = 3e-83, Method: Composition-based stats. Identities = 101/476 (21%), Positives = 190/476 (40%), Gaps = 84/476 (18%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + KN +DLGL I + ++ L G V Sbjct 61 PNNPLYSVKNFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLMGNPP------KNLVGQ 114 Query 259 SKAPDGYIVKSQHSGNAQVTQT-KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 S++ G + +++ + + P+ALI+ P+RELA Q + I+ K++D Sbjct 115 SQSGTGKTAAFVLNILSRLDLSSEQAQKTPQALILAPTRELARQIVGVIQVMGKFLDGLH 174 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 + + A +VVGTPG + D++ + ++++ +VLDEAD +L Sbjct 175 IGTAV-----PADTNARPTRMEASVVVGTPGTVMDMIKKRIMVAAKLKVIVLDEADNMLD 229 Query 378 -QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 QG D R+ +P + +QV++ SAT + V + + K + L+ E+ Sbjct 230 QQGLGDQCIRVKALLP------RDIQVVLFSATFPAH-VHQYASKFAPAANELTLQHEEL 282 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 + + + + + D+ + + T Sbjct 283 TVEGIKQLYLDCASEEDKYRTLVQLYGLLT------------------------------ 312 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 + +IIF +T+ +E+ + +G + L G + +R Q Sbjct 313 ---------VGSSIIFVKTRASAVEIERRMVAEG---------HTVASLTGGIEGSQRDQ 354 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIGR 605 +++F+ G + LI T+V ARGID+ V VIN +P+ + Q Y+HRIGR Sbjct 355 IIDQFRAGHAKVLITTNVLARGIDVSTVSMVINYDIPELHQPPNRPRQADFQTYLHRIGR 414 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 GR R+G++IS V+ +E + + + K +NT ++ W ++ + Sbjct 415 TGRFGRVGVSISFVSNREE---WEMLNQIQK-YFNTDIQR-IDTKDWDEVEDIIKK 465 Score = 87.1 bits (214), Expect = 1e-16, Method: Composition-based stats. Identities = 24/116 (21%), Positives = 52/116 (45%), Gaps = 7/116 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F ++G+ P I Q + M++ P+ IQ ++PL++G +++ +++G+GKT AF + Sbjct 68 VKNFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLMGNPPKNLVGQSQSGTGKTAAFVL 127 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 ++ + + + Q KT + + DGL + Sbjct 128 NILSRLDLSSEQAQ-----KTPQALILAPTRELARQIVGVIQVMGKFLDGLHIGTA 178 >sp|A5DY34|DRS1_LODEL ATP-dependent RNA helicase DRS1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DRS1 PE=3 SV=1 Length=686 Score = 281 bits (718), Expect = 5e-83, Method: Composition-based stats. Identities = 99/471 (21%), Positives = 188/471 (40%), Gaps = 68/471 (14%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 SK ++L L+ I ++ ++ + + VA ++ G Sbjct 195 SKTFQELQLSRPILKSLQQLGFTVPTPVQASTIPIAL--------LGKDIVASAQTGSGK 246 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 ++ K + KA+I+ P+RELA Q + ++ +++ N L + +G Sbjct 247 TAAYLIPIIERLLYVKNS-TSTKAIILTPTRELAIQVHDVGRKLGQFVSN--LNFGMAVG 303 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G++ + Q L+ DIV+ TPGRL D + ++ ++ V+ L++DEAD +L +G+ + + Sbjct 304 GLSLKQQEQQLKTRPDIVIATPGRLIDHIRNSPSFSVEDVQVLIIDEADRMLEEGFQEEL 363 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + + IP+ ++ Q ++ SAT+++ ++ L + ++ P V + +V + Sbjct 364 TEILSLIPK-----QKRQTLLFSATMNNTKIQDLVQLSLNKPIKVSIDPPRTVASKLEQQ 418 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + + + L + + Sbjct 419 FVRIRKREELKPAVL---------------------------------------YLLLKK 439 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + ++F RTK++ + LHG +R N++ FK Sbjct 440 LEGRTVVFTRTKVEAHK---------LRIILGLLGLTVAELHGALTQEQRLANVKAFKN- 489 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE-K 623 +V LICTD+AARG+DI + YVIN +P + Y HR+GR RA R G +IS V + Sbjct 490 NVNVLICTDLAARGLDI-RIEYVINYDMPKTYEIYTHRVGRTARAGRKGTSISFVGESMQ 548 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 ++ ++ D I IEE + E Sbjct 549 DRNIVKNAIQFNSRSVARKIDWDEVEKIQTKIKLNEGAIEEVIEEEKQARE 599 Score = 105 bits (261), Expect = 5e-22, Method: Composition-based stats. Identities = 28/108 (26%), Positives = 54/108 (50%), Gaps = 7/108 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E+ + I ++++++ + +PT +QA +IP+ L G D++ +A+TGSGKT A+ IP+I Sbjct 196 KTFQELQLSRPILKSLQQLGFTVPTPVQASTIPIALLGKDIVASAQTGSGKTAAYLIPII 255 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + K +T + + + +D G L Sbjct 256 ERLLYV-------KNSTSTKAIILTPTRELAIQVHDVGRKLGQFVSNL 296 >sp|Q0CDT1|DBP5_ASPTN ATP-dependent RNA helicase dbp5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp5 PE=3 SV=1 Length=487 Score = 275 bits (703), Expect = 5e-83, Method: Composition-based stats. Identities = 106/477 (22%), Positives = 194/477 (41%), Gaps = 86/477 (18%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + KN +DLGL I + ++ L V Sbjct 70 PNNPLFSVKNFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLSNPP------KNLVGQ 123 Query 259 SKAPDGYIVKSQHSGNAQVTQ-TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 S++ G + +++ T+ + P+ALI+ P+RELA Q + I+ +++DN Sbjct 124 SQSGTGKTAAFVLNILSRLDLSTEQMQKTPQALILAPTRELARQIVGVIQVMGQFLDN-- 181 Query 318 LRELLIIG-GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 LIIG V A +VVGTPG + D++ + ++++ LVLDEAD +L Sbjct 182 ----LIIGTAVPADTNNRPARMEASVVVGTPGTVMDMIKKRIMVPAKLQVLVLDEADNML 237 Query 377 S-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 QG D R+ +P + +QV++ SAT + V + + K + L+ E+ Sbjct 238 DQQGLGDQCIRVKALLP------RTIQVVLFSATFPTH-VHQYASKFAPQANELTLQHEE 290 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + + + + + D+ + + T Sbjct 291 LTVEGIKQLYLDCSDEEDKYRTLVSLYGLLT----------------------------- 321 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + +IIF +T+ +E+ + +G + L G + +R Sbjct 322 ----------VGSSIIFVKTRQSAMEIEKRMVAEG---------HTVASLTGGIEGSQRD 362 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIG 604 +++F+ G + LI T+V ARGID+ V VIN +P+ + Q Y+HRIG Sbjct 363 AVIDQFRAGAAKVLITTNVLARGIDVSTVSMVINYDIPELHLPPNQPRQADFQTYLHRIG 422 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R GR R+G++IS V+ E +++ + K +NT ++ W ++ + Sbjct 423 RTGRFGRVGVSISFVSNRDE---WNMLNQIQK-YFNTSIQR-IDTKDWDEVEDIIKK 474 Score = 86.7 bits (213), Expect = 1e-16, Method: Composition-based stats. Identities = 23/116 (20%), Positives = 50/116 (43%), Gaps = 7/116 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F ++G+ P I Q + M++ P+ IQ ++PL+L +++ +++G+GKT AF + Sbjct 77 VKNFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLSNPPKNLVGQSQSGTGKTAAFVL 136 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 ++ + + + Q KT + + D L + Sbjct 137 NILSRLDLSTEQMQ-----KTPQALILAPTRELARQIVGVIQVMGQFLDNLIIGTA 187 >sp|Q5RFQ5|DDX6_PONAB Probable ATP-dependent RNA helicase DDX6 OS=Pongo abelii OX=9601 GN=DDX6 PE=2 SV=1 Length=483 Score = 275 bits (702), Expect = 5e-83, Method: Composition-based stats. Identities = 96/433 (22%), Positives = 167/433 (39%), Gaps = 66/433 (15%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 KDL + K C+ + + E P ++ + ++ + + ++ Sbjct 81 KDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARA 140 Query 270 QHSGN-------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 ++ + + + +A+++ P+RELA Q Q K++ + + Sbjct 141 KNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGA--KVMA 198 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG R + L++ V +V+ TPGR+ DL+ G + V+ +VLDEAD LLSQ + Sbjct 199 TTGGTNLRGDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQ 258 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + +P K Q+++ SAT V+K + P ++L E+ V Sbjct 259 IMEDIILTLP------KNRQILLYSATFP-LSVQKFMNSHLQKPYEINLM-EELTLKGVT 310 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + K Sbjct 311 QYYAYVTERQ----------------------------------------KVHCLNTLFS 330 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +++Q+IIFC + + L + Q G +SC +H + R + F+ Sbjct 331 RLQINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFR 381 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G R L+CTD+ RGIDI V VIN P + Y+HRIG GR +GLAI+L+ + Sbjct 382 NGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGGSGRFGHLGLAINLITYD 441 Query 623 KEKVWYHVCSSRG 635 + G Sbjct 442 DRFNLKSIEEQLG 454 Score = 92.9 bits (229), Expect = 2e-18, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 9/91 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + E+ + EM W P+ IQ ESIP+ L G D+L A+ G+GK+GA+ IP+++ Sbjct 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 + + Q + + Sbjct 158 LDLKKDNIQ---------AMVIVPTRELALQ 179 >sp|Q6BRE4|DBP5_DEBHA ATP-dependent RNA helicase DBP5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP5 PE=3 SV=1 Length=493 Score = 275 bits (703), Expect = 6e-83, Method: Composition-based stats. Identities = 109/462 (24%), Positives = 191/462 (41%), Gaps = 83/462 (18%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ ++LGL+ E+ + ++ L + S++ G Sbjct 103 KSFEELGLSSELLKGLYAMKFNKPSKIQEKALPLLISNPP------KNMIGQSQSGTGKT 156 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + +++ + + + P+RELA QTL I K+ K+ LI+ Sbjct 157 AAFSLT---MLSRVDESDPNTQCICLAPARELARQTLEVITTMSKF---TKITSQLIVPD 210 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFIN 385 R Q ++VGTPG L DL+ +N S+V+ VLDEAD +L QG D Sbjct 211 AMQRGQ----STCAHVLVGTPGTLLDLIRRKLINTSKVKVFVLDEADNMLESQGLGDQCV 266 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 R+ +P+ T Q+++ SAT +V+K +EK + ++LK E+ + + + Sbjct 267 RVKRTLPKAT------QLVLFSATFPD-EVRKYAEKFVPNANSLELKQEELNVEGIKQLY 319 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + + E+ SE +L Sbjct 320 MDCDSANHKF---------------------------EVLSELYGLL------------T 340 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + +IIF +TK + L ++G C LH + ER + ++ F++G Sbjct 341 IGSSIIFVKTKDTANILYAKMKKEG---------HKCSILHAGLETSERDRLIDDFREGR 391 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAISLV 619 + LI T+V ARGIDI V V+N LP + Y+HRIGR GR R+G++IS V Sbjct 392 SKVLITTNVLARGIDIASVSMVVNYDLPVDQKGAPDPSTYLHRIGRTGRFGRVGVSISFV 451 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 +K + + + R Y ++ T ++E++ + + Sbjct 452 H--DQKSYQDLMAIRS---YFGNIEMTRVPTDDWDEVEKIVK 488 Score = 91.0 bits (224), Expect = 7e-18, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 64/132 (48%), Gaps = 10/132 (8%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ E+ + + M + P+ IQ +++PL++ +++ +++G+GKT AFS+ Sbjct 102 VKSFEELGLSSELLKGLYAMKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSL 161 Query 59 PVIQIVYETLKDQQ---EGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSRE 115 ++ V E+ + Q + +T + M+ + + ++ I D + Q + Sbjct 162 TMLSRVDESDPNTQCICLAPARELARQTLEVITT---MSKFTKITSQLIVPDAM--QRGQ 216 Query 116 VKEWHGCRATKG 127 H T G Sbjct 217 STCAHVLVGTPG 228 >sp|A1CNV8|DRS1_ASPCL ATP-dependent RNA helicase drs1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=drs1 PE=3 SV=1 Length=826 Score = 283 bits (724), Expect = 1e-82, Method: Composition-based stats. Identities = 100/452 (22%), Positives = 175/452 (39%), Gaps = 67/452 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 ++ +D L+ I + + ++ + V + G Sbjct 306 RSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVAL--------LGKDIVGSAVTGSGKT 357 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + I+ P+RELA Q N + + D + ++GG Sbjct 358 AAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATHTD---VTFCQLVGG 414 Query 327 VAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + R+Q ++L+ D+++ TPGR +D + ++ + + LVLDEAD +L G++D +N Sbjct 415 FSLREQENILKKRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEDGFADELN 474 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IP K Q ++ SAT+ V KL ++ P + + + + + Sbjct 475 EILTTIP------KSRQTMLFSATMTD-SVDKLIRVGLNRPVRLMVDSKKNTSMNLTQEF 527 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + P R +RLG Y + E Sbjct 528 VRLRP--GREGKRLG-----------------------------------YLLYLCSEIF 550 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + I+F R K + + F G LHG +R +++E F++G Sbjct 551 TGRVIVFFRQKKEAHRVRIVFGLLG---------LKAAELHGSMSQEQRIKSVESFREGK 601 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V FL+ TD+A+RG+DI GV VIN P + Y+HR+GR RA R G A ++ A K Sbjct 602 VAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAADPDRK 661 Query 626 VWYHVCSS--RGKGCYNTRLKEDGGCTIWYNE 655 V + +R+ E W + Sbjct 662 VVKAAVRAGKAQGAKIASRVVEPAVADQWAAK 693 Score = 108 bits (270), Expect = 4e-23, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 54/111 (49%), Gaps = 6/111 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F + + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P++ Sbjct 306 RSFQDFNLSRPILRGLASVNFTTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL 365 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 + + +K T+ + + Y+ + A +D CQ Sbjct 366 ERLLFRP------RKVPTSRVAILMPTRELAVQCYNVATKLATHTDVTFCQ 410 >sp|P34689|GLH1_CAEEL ATP-dependent RNA helicase glh-1 OS=Caenorhabditis elegans OX=6239 GN=glh-1 PE=1 SV=3 Length=763 Score = 282 bits (720), Expect = 1e-82, Method: Composition-based stats. Identities = 88/376 (23%), Positives = 145/376 (39%), Gaps = 51/376 (14%) Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA------PKALIVEPSRELAEQTLNNIKQ 308 +A ++ G ++ L A P+ +I+ P+RELA+Q N ++ Sbjct 381 IMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRK 440 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 F Y +++ + GG+A +E G I+VGT GR+ G + L + RF V Sbjct 441 FA-YQTMMEIKP--VYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFV 497 Query 369 LDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FP 426 LDEAD ++ G+ I + N + Q ++ SAT V++ + + Sbjct 498 LDEADRMIDAMGFGTDIETIVNY--DSMPRKENRQTLMFSATFPD-SVQEAARAFLRENY 554 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 + + + V + + Sbjct 555 VMIAIDKIGAANKCVLQEFERCERSEKK----------------------------DKLL 586 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 E + I Y E + ++F + D L Q + +H Sbjct 587 ELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLASIL---------SSAQVPAITIH 637 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 G R+ ER + L +F+ G LI T VA RG+DI GV +VIN +PD +Y+HRIGR Sbjct 638 GAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRT 697 Query 607 GRAERMGLAISLVATE 622 GR G A S ++ + Sbjct 698 GRVGNSGRATSFISED 713 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 0/102 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+E + + + V + T IQ ++PL+ G D++ A+TGSGKT AF +P++ Sbjct 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + G+ G + + Y+ G FA Sbjct 401 TRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFA 442 >sp|Q0UN57|PRP5_PHANO Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=PRP5 PE=3 SV=2 Length=1184 Score = 288 bits (738), Expect = 1e-82, Method: Composition-based stats. Identities = 94/449 (21%), Positives = 178/449 (40%), Gaps = 60/449 (13%) Query 247 FKFPPKDGFVALSKAPDGYIVKS-QHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLN 304 + ++K G + + Q P + P LI+ P+REL+ Q +N Sbjct 576 PIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQRPLKPADGPIGLILAPTRELSLQIVN 635 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGK---LN 360 +K F ++ + GG DQ+++++ G + I+ T GRL DL+ + L+ Sbjct 636 ELKPF---LNASGITIKCAYGGQPISDQIAMIKRGGIHILCATAGRLIDLLQSNSGRVLS 692 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 ++ ++VLDEAD + G+ + ++ I Q I+ SAT + L+ Sbjct 693 FRRITYVVLDEADRMFDMGFEPQVMKILASI------RPDRQTILFSATFPKT-MAALAR 745 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 K + P V + G V + + V P ++ +L Sbjct 746 KALDKPAEVIIGGRSKVAPEITQHITIVPPSYEKKIAKL--------------------- 784 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 + + + + Q +IF + ++L K F Sbjct 785 -------------LHHLGQTFSDDENAQVLIFTERQETAEDLLSKLF--------KAKYF 823 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 + +HG + +R + + FK+G + LI T VAARG+D+ G+ V N P ++YV Sbjct 824 AVNTIHGAKDQTDRNEAINEFKQGLLNILIATSVAARGLDVPGLALVYNFDCPTHLEDYV 883 Query 601 HRIGRVGRAERMGLAISLV-ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 HR GR GRA GLA++L+ +E+ H+ + + ++ +++ Sbjct 884 HRCGRTGRAGNKGLAVTLIENPGQERFAVHIVKALKESGAEVPDDLQAMANAFHEKVKSG 943 Query 660 SEIEEHLNCTISQVEP-DIKVPVDEFDGK 687 +E ++ ++ D +D+ K Sbjct 944 TEKYYNVGFKGKGLDELDASRALDKKREK 972 Score = 105 bits (263), Expect = 4e-22, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 4/102 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +++MG++ + + + PT IQA++IP+ G D++ A+TGSGKT AF IP+ Sbjct 543 VTKWAQMGLLQQTMDVFTRVGYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPM 602 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 I+ V DQ+ K I + + + + F Sbjct 603 IRHVL----DQRPLKPADGPIGLILAPTRELSLQIVNELKPF 640 >sp|Q9SA27|RH36_ARATH DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana OX=3702 GN=RH36 PE=2 SV=1 Length=491 Score = 274 bits (700), Expect = 1e-82, Method: Composition-based stats. Identities = 102/446 (23%), Positives = 177/446 (40%), Gaps = 64/446 (14%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 K + L++ G ++ + P AL+V P+RELA Q Sbjct 90 PKILAGRDVLGLAQTGSGKTAAFALPILHRLAED---PYGVFALVVTPTRELAFQLAEQF 146 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQ 363 K ++ LR +I+GG+ Q L + IV+ TPGR+ L+ S+ Sbjct 147 KALGSCLN---LRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKVLLENNPDVPPVFSR 203 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 +FLVLDEAD +L G+ D + + +P K Q ++ SAT+ S +++ L E Sbjct 204 TKFLVLDEADRVLDVGFQDELRTIFQCLP------KSRQTLLFSATMTS-NLQALLEHSS 256 Query 424 HFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 + + + DT+ + + L+ Sbjct 257 NKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELY--------------------------- 289 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 + + +++ + A+IF T C L + + + Sbjct 290 ----------LVHILSQMEDKGIRSAMIFVSTCRTCQRLSLMLDEL---------EVENI 330 Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 +H R L +FK G V L+ TDVA+RG+DI V VIN +P + ++YVHR+ Sbjct 331 AMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRV 390 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC--YNTRLKEDGGCTIWYNEMQLLSE 661 GR RA R GLA+S++ K+ + + GK YN ++ D ++ + ++ Sbjct 391 GRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPYNKKVITDSLEVTKVSKAKRVAM 450 Query 662 IEEHLNCTISQVEPDIKVPVDEFDGK 687 ++ N +V+ K+ K Sbjct 451 MKMLDNGFEDKVKDRRKLKRKTLADK 476 Score = 95.6 bits (236), Expect = 2e-19, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 42/103 (41%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F +G+ + +E+ PT +Q +P IL G DVL A+TGSGKT AF++P++ Sbjct 58 TNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPIL 117 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + E + + ++ A Sbjct 118 HRLAEDPY---------GVFALVVTPTRELAFQLAEQFKALGS 151 >sp|P0CQ92|DRS1_CRYNJ ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DRS1 PE=3 SV=1 Length=808 Score = 282 bits (722), Expect = 1e-82, Method: Composition-based stats. Identities = 108/493 (22%), Positives = 177/493 (36%), Gaps = 76/493 (15%) Query 215 AFEIPPHMKNQALFP----ACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 AF P A L L+ +F P A+ A G + Sbjct 207 AFFSSDPTTTDPTLPSSFTAMNLSRPLLR-ALTSLQFTAPTPIQARAIPLALLGRDILGS 265 Query 271 HSGNAQVTQTKFLP--------------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 + T +P A + L++ P+RELA Q K + Sbjct 266 AVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEK-GGL 324 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGL 375 +R L++GG++ Q L DI++ TPGRL D + +T LS + LV+DEAD + Sbjct 325 DVRFALLVGGLSLNAQAHTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRM 384 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L G++D + + P + Q ++ SAT+ V +L + + P V + + Sbjct 385 LEAGFTDELEEIIKACP------RSRQTMLFSATMTD-SVDELVKLSLDKPIRVFVDPKR 437 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + V + R L Sbjct 438 NTARGLTQEFVRIRSDDSRSPSLLA----------------------------------- 462 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 K ++ IIF R+K + F G LHG+ +R Sbjct 463 ----LCKRTIREKCIIFFRSKALAHQMRIVFGLFG---------LKAAELHGNLTQEQRL 509 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 Q L FK G V +L+ TD+A+RG+DI GV VIN +P + Y HR+GR RA R G + Sbjct 510 QALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQYTHRVGRTARAGRKGRS 569 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 +SLV K+ R+ T +++ + + + + + Sbjct 570 VSLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAMKEKLEEFKDDIQEILKEEKEEKL 629 Query 676 DIKVPVDEFDGKV 688 + ++ G+ Sbjct 630 LRQADMEIKKGQN 642 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 4/106 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ M + + +A+ + + PT IQA +IPL L G D+L +A TGSGKT AF +P++ Sbjct 222 SSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPIL 281 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + + GK G + + G A A Sbjct 282 ERLCYRDR----GKGGAACRVLVLCPTRELAVQCEAVGKALAEKGG 323 >sp|P0CQ93|DRS1_CRYNB ATP-dependent RNA helicase DRS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DRS1 PE=3 SV=1 Length=808 Score = 282 bits (722), Expect = 1e-82, Method: Composition-based stats. Identities = 108/493 (22%), Positives = 177/493 (36%), Gaps = 76/493 (15%) Query 215 AFEIPPHMKNQALFP----ACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 AF P A L L+ +F P A+ A G + Sbjct 207 AFFSSDPTTTDPTLPSSFTAMNLSRPLLR-ALTSLQFTAPTPIQARAIPLALLGRDILGS 265 Query 271 HSGNAQVTQTKFLP--------------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 + T +P A + L++ P+RELA Q K + Sbjct 266 AVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEAVGKALAEK-GGL 324 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGL 375 +R L++GG++ Q L DI++ TPGRL D + +T LS + LV+DEAD + Sbjct 325 DVRFALLVGGLSLNAQAHTLRTLPDILIATPGRLIDHLTNTPSFTLSALDVLVIDEADRM 384 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L G++D + + P + Q ++ SAT+ V +L + + P V + + Sbjct 385 LEAGFTDELEEIIKACP------RSRQTMLFSATMTD-SVDELVKLSLDKPIRVFVDPKR 437 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + V + R L Sbjct 438 NTARGLTQEFVRIRSDDSRSPSLLA----------------------------------- 462 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 K ++ IIF R+K + F G LHG+ +R Sbjct 463 ----LCKRTIREKCIIFFRSKALAHQMRIVFGLFG---------LKAAELHGNLTQEQRL 509 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 Q L FK G V +L+ TD+A+RG+DI GV VIN +P + Y HR+GR RA R G + Sbjct 510 QALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMPGQLAQYTHRVGRTARAGRKGRS 569 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 +SLV K+ R+ T +++ + + + + + Sbjct 570 VSLVGEADRKMLKAAIKQAEADQVRHRIIPSEAVTAMKEKLEEFKDDIQEILKEEKEEKL 629 Query 676 DIKVPVDEFDGKV 688 + ++ G+ Sbjct 630 LRQADMEIKKGQN 642 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 4/106 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F+ M + + +A+ + + PT IQA +IPL L G D+L +A TGSGKT AF +P++ Sbjct 222 SSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPIL 281 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + + GK G + + G A A Sbjct 282 ERLCYRDR----GKGGAACRVLVLCPTRELAVQCEAVGKALAEKGG 323 >sp|Q1E2B2|DRS1_COCIM ATP-dependent RNA helicase DRS1 OS=Coccidioides immitis (strain RS) OX=246410 GN=DRS1 PE=3 SV=1 Length=840 Score = 283 bits (723), Expect = 2e-82, Method: Composition-based stats. Identities = 107/473 (23%), Positives = 180/473 (38%), Gaps = 73/473 (15%) Query 216 FEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV-------- 267 + + F L L+ F P A+ G + Sbjct 309 PTKSEETSSNSTFQNFNLSRPILR-GLAAVGFSAPTPIQRKAIPVGLLGKDLVGGAVTGS 367 Query 268 -KSQHSGNAQVTQTKFLPNAP---KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 K+ + + + P + I+ P+RELA Q N + Y D + + Sbjct 368 GKTAAFIIPILERLLYRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTD---ITFCQL 424 Query 324 IGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 +GG + R+Q +VL+ D+++ TPGR +D + ++ + + LVLDEAD +L G++D Sbjct 425 VGGFSLREQENVLKQRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFAD 484 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 +N + N IP K Q ++ SAT+ V KL ++ P + + + T+ Sbjct 485 ELNEILNTIP------KSRQTMLFSATMTD-SVDKLIRVGLNRPVRLMVDSKKHTVGTLV 537 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + P + + Y V Sbjct 538 QEFVRLRPGREG-------------------------------------KRMGYLVLLCN 560 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 ++ I+F R K + F G LHG +R +E F+ Sbjct 561 TIYTNRVIVFFRQKKEAHRARIIFGLLG---------LKAAELHGSMSQEQRINAVEAFR 611 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G V FL+ TD+A+RG+DI GV VIN P + Y+HR+GR RA R G A ++ A Sbjct 612 DGKVPFLLATDLASRGLDIKGVESVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEP 671 Query 623 KEKVWYHVCSS--RGKGCYNTRLKEDGGCTIWYNEMQLLS-EIEEHLNCTISQ 672 KV + +R+ + W ++++ + EIE+ L + Sbjct 672 DRKVVKAAVKAGRAQGAKIVSRVVDPAVADEWASKVEEMQAEIEDILKEEKEE 724 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 51/111 (46%), Gaps = 6/111 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + I + + + + PT IQ ++IP+ L G D++ A TGSGKT AF IP++ Sbjct 319 STFQNFNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLGKDLVGGAVTGSGKTAAFIIPIL 378 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 + + +K T+ + + Y+ + A +D CQ Sbjct 379 ERLLYRP------RKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQ 423 >sp|Q74Z73|HAS1_EREGS ATP-dependent RNA helicase HAS1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=HAS1 PE=3 SV=2 Length=504 Score = 274 bits (700), Expect = 2e-82, Method: Composition-based stats. Identities = 80/429 (19%), Positives = 160/429 (37%), Gaps = 72/429 (17%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L L+ + + ++ + + +K G + Sbjct 44 LNLSSQTLKAIGKMGFTKMTQVQARTIP--------PLMAGRDVLGAAKTGSGKTLAFLL 95 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + KF P N +++ P+RELA Q ++ ++ ++IGG R Sbjct 96 PAIEMLHSLKFKPRNGTGVIVITPTRELALQIFGVARELMEFHSQT---FGIVIGGANRR 152 Query 331 DQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 + L GV++++ TPGRL D + +T ++ LV+DEAD +L G+ D + ++ Sbjct 153 QEAEKLAKGVNLLIATPGRLLDHLQNTKGFVFKNLKALVIDEADRILEIGFEDEMKQIIK 212 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGED--SVPDTVHHVVV 446 +P + Q ++ SAT + V+ L+ + P ++++ E S D + V Sbjct 213 ILP-----NEDRQSMLFSAT-QTTKVEDLARISLRPGPLFINVDSEKETSTADGLEQGYV 266 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + + +K+ + Sbjct 267 VCDSDK----------------------------------------RFLLLFTFLKKFQN 286 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I+F + + + LHG +K +R F + Sbjct 287 KKIIVFLSSCNSVKYYAELL---------NYIDLPVLELHGKQKQQKRTNTFFEFCNAER 337 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATEKEK 625 L+CTDVAARG+DI V ++I PD+ ++Y+HR+GR R + G ++ + + Sbjct 338 GILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPHELG 397 Query 626 VWYHVCSSR 634 ++ +++ Sbjct 398 FLRYLKAAK 406 Score = 104 bits (259), Expect = 4e-22, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 49/93 (53%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+ + + +A+ +M + T +QA +IP ++ G DVL AA+TGSGKT AF +P I++ Sbjct 41 FDELNLSSQTLKAIGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEM 100 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 ++ + G T + + + + Sbjct 101 LHSLKFKPRNG-----TGVIVITPTRELALQIF 128 >sp|Q7RYZ7|DBP8_NEUCR ATP-dependent RNA helicase dbp-8 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-8 PE=3 SV=1 Length=626 Score = 278 bits (710), Expect = 2e-82, Method: Composition-based stats. Identities = 104/421 (25%), Positives = 164/421 (39%), Gaps = 64/421 (15%) Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S+ G V + Q P+A +I+ P+RELA Q + + + L Sbjct 239 SRTGSGKTVAFAVPI---LQQWAANPSAIFGVILTPTRELALQIMEQVIALSQ---PHVL 292 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADG 374 + +LI GG R Q L +V+ TPGRL D + T + L +V+F+VLDEAD Sbjct 293 KAVLITGGADMRKQAIDLAKRPHLVIATPGRLADHIRTSGEDTICGLRRVKFIVLDEADR 352 Query 375 LL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LL + G+ + + + + Q ++ +AT+ +VK LSE+ Sbjct 353 LLANSGHGSMLPDVEECFSVLPPPSE-RQTLLFTATMTP-EVKALSER------------ 398 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 +P V V+ + + L + H++ H + +P Sbjct 399 -PPIPGRAPVFVCEVDTQRLAIPATLRQMHLQVPVTHREHYLHMFLLTP----------- 446 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 ++ IIFC D + LH + Sbjct 447 ---------QNVDKSVIIFCNRTSTADF---------LHHLLRLLDHRVTSLHSKLPQSQ 488 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R NL RF+ R L+ TDVAARG+DI V VIN +P + +Y+HR+GR RA R G Sbjct 489 RIDNLGRFRASAARILVATDVAARGLDIPEVKIVINYDIPRDPDDYIHRVGRTARAGRKG 548 Query 614 LAISLVATEKEKVWYHVCSSRGKGCY---------NTRLKEDGGCTIWYNEMQLLSEIEE 664 A++ V + + G+ TR+ D + + + L EIEE Sbjct 549 DAVTFVGQRDVDLVLAIEQRVGRQMEAWTEEGVNLETRVIRDALKVVGEKKREALLEIEE 608 Query 665 H 665 Sbjct 609 Q 609 Score = 99.0 bits (245), Expect = 3e-20, Method: Composition-based stats. Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 20/141 (14%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + V P + Q++ M PT IQ IP IL G D + + TGSGKT AF++P++ Sbjct 195 TTFDALNVRPWLVQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPIL 254 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLCC 111 QQ + + + ++ A + G + Sbjct 255 ---------QQWAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKAVLITGGADMRK 305 Query 112 QSREV-KEWHGCRATKGLMKG 131 Q+ ++ K H AT G + Sbjct 306 QAIDLAKRPHLVIATPGRLAD 326 >sp|Q38F76|IF4A_TRYB2 Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=Tb09.160.3270 PE=3 SV=1 Length=404 Score = 271 bits (692), Expect = 2e-82, Method: Composition-based stats. Identities = 113/445 (25%), Positives = 191/445 (43%), Gaps = 70/445 (16%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIV 267 +D + P ++ F L L+ ++ G E+ + V ++ D Sbjct 10 QDQDSFLDDQPGIRPIPSFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQ 69 Query 268 KSQHSGNA------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI-DNPKLRE 320 +G + + F N + L++ P+RELA QT I + +++ + Sbjct 70 AQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELAMQTAEVITRIGEFLAEGSSSFC 129 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 +GG +D L++G + VGTPGR+ D+ G + +R LVLDEAD +LSQG+ Sbjct 130 ATFVGGTRVQDDYRKLQSGTIVAVGTPGRVVDVTKRGAMRTESLRVLVLDEADEMLSQGF 189 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 ++ I + +P K +QV + SAT+ DV +L++K M PT + +K E + Sbjct 190 AEQIYDIFRFLP------KEIQVALFSATMPD-DVLELTKKFMRDPTRILVKRESLTLEG 242 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + + V + K + + Sbjct 243 IKQFFIAVEEEH----------------------------------------KLDTLMDL 262 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + + Q++IF T+ D L + C+H + ER++ + Sbjct 263 YETVSIAQSVIFANTRRKVDWLASQL---------NSSNHTVSCMHSEMSKQEREKVMGT 313 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G R L+ TD+ ARGID+H V VIN LP K+NY+HRIGR GR R G+AI+ V Sbjct 314 FRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVT 373 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKE 645 + +V + S Y+T+++E Sbjct 374 QKDVEVLREIESH-----YHTQIEE 393 Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats. Identities = 32/154 (21%), Positives = 60/154 (39%), Gaps = 17/154 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA----FAIGSDGLCC----Q 112 +Q + Q S + M + + A GS C Sbjct 85 LQRLDFRHNVLQ---------GLVLSPTRELAMQTAEVITRIGEFLAEGSSSFCATFVGG 135 Query 113 SREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCR 146 +R ++ ++ + G V +G R Sbjct 136 TRVQDDYRKLQSGTIVAVGTPGRVVDVTKRGAMR 169 >sp|A5DDF4|PRP5_PICGU Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=PRP5 PE=3 SV=2 Length=862 Score = 283 bits (724), Expect = 2e-82, Method: Composition-based stats. Identities = 110/498 (22%), Positives = 196/498 (39%), Gaps = 97/498 (19%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-----------A 286 L+ G + A+ D V + SG + + Sbjct 281 LEEKLGYDTPSPIQSQALPAIMSGRDIIGVANTGSGKTLAFVIPLIRHIMDQPPLKSGDG 340 Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 P +I+ P+RELA Q + F + ++ L GG Q++ L+ G +I+VGT Sbjct 341 PIGVILTPTRELALQIQKELVNFTQAVE---LSVCCCYGGSPIESQIADLKRGTEIIVGT 397 Query 347 PGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 PGR+ DL++ NL + FLVLDEAD + G+ +N++ +QI Q+ Sbjct 398 PGRVIDLLAANGGRVTNLRRTTFLVLDEADRMFDMGFEPQVNKVLSQI------RPDKQM 451 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 ++ SAT ++ L+ + P + G V + VV ++ D ++L Sbjct 452 VLFSATFPK-KLESLARSFLVDPIEIVAGGISVVAPEITQRVVLIDDSGDISQKKLQALL 510 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 D+ +D + +IF + D+L Sbjct 511 KIVDEFSVED-------------------------------PEGKILIFVDKQEAADDLM 539 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK-KGDVRFLICTDVAARGIDIH 582 + +Q SC+ +HG + +RK +++F K +R LI T +AARG+D+ Sbjct 540 VRLLN---------NQISCIVIHGGKDQVDRKHAIKQFSDKNGLRVLIATSIAARGLDVR 590 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 G+ VIN P ++YVHR+GR GRA G A++LV + +E+ + + Sbjct 591 GLNLVINYDAPSHMEDYVHRVGRTGRAGATGTAVTLVLSSQEREIRDLVRAM-------- 642 Query 643 LKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYK 702 ++ + + +++ D+F KV G+++ G K Sbjct 643 ----------------------KMSGKVDDIPAELQSIADKFLKKVKSGEEKFNSGFGGK 680 Query 703 G--HVDILAPTVQELAAL 718 G ++ V+E+ Sbjct 681 GLENLQERRDNVREIEMQ 698 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 56/113 (50%), Gaps = 6/113 (5%) Query 1 MAAFSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + ++++G+ I +EE + + P+ IQ++++P I+ G D++ A TGSGKT AF IP Sbjct 265 IQKWAQLGLPSSIMTVLEEKLGYDTPSPIQSQALPAIMSGRDIIGVANTGSGKTLAFVIP 324 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC 111 +I+ + DQ K G I + + + F + +CC Sbjct 325 LIRHIM----DQPPLKSGDGPIGVILTPTRELALQIQKELVNFTQAVELSVCC 373 >sp|Q4I830|DRS1_GIBZE ATP-dependent RNA helicase DRS1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DRS1 PE=3 SV=1 Length=796 Score = 282 bits (720), Expect = 2e-82, Method: Composition-based stats. Identities = 98/428 (23%), Positives = 166/428 (39%), Gaps = 70/428 (16%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL------------SKAPDGYI 266 P + F L ++ F P ++ ++ G Sbjct 249 PDKKATASSFQTMSLSRPIMR-GLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKT 307 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + +++ P+RELA Q + + D ++ L +GG Sbjct 308 GAFILPILERLLYRPKKIPTTRVVVLLPTRELAIQCHAVATKLAAFTD---IKFTLAVGG 364 Query 327 VAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 ++ + Q L+ D+++ TPGR +D + ++ ++ V LVLDEAD +L G++D +N Sbjct 365 LSLKAQELELKLRPDVIIATPGRFIDHMRNSASFSVDTVEILVLDEADRMLEDGFADELN 424 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + +P K Q ++ SAT+ S V +L + ++ P V + + T+ Sbjct 425 EILTTLP------KSRQTMLFSATMTS-SVDRLIQIGLNRPARVMVNSQKKTVTTLVQEF 477 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + P + + Y K Sbjct 478 VRLRPGRE-------------------------------------DKRMGYLAHVCKNLY 500 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 ++ IIF R K D F G SC LHG +R ++E F+ G Sbjct 501 KERVIIFFRQKKDAHRARIIFGLLG---------LSCAELHGSMNQTQRISSVEDFRDGK 551 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V +L+ TD+A+RG+DI GV VIN P YVHR+GR RA R G+A+++ A K Sbjct 552 VAYLLATDLASRGLDIKGVDTVINYEAPQSLDIYVHRVGRTARAGRKGVALTIAAESDRK 611 Query 626 VWYHVCSS 633 V + Sbjct 612 VVKAAVKA 619 Score = 110 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 6/106 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F M + I + + + + PT IQA+SIP+ L G DV+ AETGSGKTGAF +P++ Sbjct 256 SSFQTMSLSRPIMRGLASVGFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPIL 315 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + K K TT + + + + A +D Sbjct 316 ERLLYRPK------KIPTTRVVVLLPTRELAIQCHAVATKLAAFTD 355 >sp|Q54S03|DDX18_DICDI Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum OX=44689 GN=ddx18 PE=3 SV=1 Length=602 Score = 277 bits (707), Expect = 2e-82, Method: Composition-based stats. Identities = 83/447 (19%), Positives = 170/447 (38%), Gaps = 76/447 (17%) Query 197 DIDKGHVKFSKN---GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKD 253 ++ + + SK +L + ++ ++ + Sbjct 106 NVSEKELGISKESIEFSNLPIEENTKKSIEEMGFKKMTPIQAKSI--------LPLLEGK 157 Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKY 312 + ++ G + + ++ F P N +I+ P+RELA Q ++ KY Sbjct 158 DLLGAARTGSGKTLAFLIPAIEVLVKSNFKPRNGTGVIIISPTRELALQIYGVARELMKY 217 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDE 371 ++IGG + + + LE GV+++V TPGRL D + +T ++ L++DE Sbjct 218 HTQTH---GIVIGGASKKPEEERLEKGVNLLVATPGRLLDHLQNTKGFITKNLKCLIIDE 274 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVD 430 AD +L G+ + ++++ ++P K Q ++ SAT + V +++ ++ P +V Sbjct 275 ADRILEVGFEEEMHQIIKKVP------KTRQTMLFSAT-QTRKVDDIAKVSLNNSPVYVG 327 Query 431 LKGED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 + E S + + V + Sbjct 328 VDDEREISTVEGLEQGYVVCPSER------------------------------------ 351 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + +K++ + I+F + + + LHG Sbjct 352 ----RFLLLYTFLKKNLSKKIIVFLSSCNAVKYTAELL---------NYIDIPVLELHGR 398 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +K +R F + LICTDVAARG+DI V ++I PD+ + Y+HR+GR R Sbjct 399 QKQQKRTNTFYEFVNAEKGILICTDVAARGLDIPSVDWIIQYDPPDDPKEYIHRVGRTAR 458 Query 609 A-ERMGLAISLVATEKEKVWYHVCSSR 634 + G A+ + ++ ++ ++ Sbjct 459 GVGKKGRALLFLLPKELGFLKYLKLAK 485 Score = 101 bits (252), Expect = 5e-21, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + +++EEM + T IQA+SI +L G D+L AA TGSGKT AF IP I++ Sbjct 121 FSNLPIEENTKKSIEEMGFKKMTPIQAKSILPLLEGKDLLGAARTGSGKTLAFLIPAIEV 180 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY---DRGSAFAIGSDGLCCQSREVK 117 + ++ + G T S + + Y + + G+ K Sbjct 181 LVKSNFKPRNG-----TGVIIISPTRELALQIYGVARELMKYHTQTHGIVIGGASKK 232 >sp|Q8L4E9|RH36_ORYSJ DEAD-box ATP-dependent RNA helicase 36 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0633500 PE=3 SV=1 Length=501 Score = 273 bits (699), Expect = 2e-82, Method: Composition-based stats. Identities = 103/453 (23%), Positives = 174/453 (38%), Gaps = 69/453 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 + + +++ G + + P AL + P+RELA Q Sbjct 109 PRALEGRDVLGIAETGSGKTAAFALPI---LHRLGEDPYGVAALALAPTRELAAQLAEQF 165 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV-- 364 + + LR L IGG + Q L +VV TPGR+ L++ +L++V Sbjct 166 RALGAPLG---LRCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLINDDP-DLAKVFA 221 Query 365 --RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKI 422 +FLVLDEAD +L + + + + +P K+ Q + SAT+ S +++ L E Sbjct 222 RTKFLVLDEADRVLDINFEEDLRVIFGSLP------KKRQTFLFSATI-SDNLRSLLELS 274 Query 423 MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 + + + DT+ + + V P L+ Sbjct 275 GNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYLF------------------------ 310 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 Y + + E + I+F T C L+ + G Sbjct 311 -------------YLLSKMNEDNIRSVIVFVSTCRTCQYLDFLLEELG---------HPA 348 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 V LH + R L FK V L+ TDVA+RG+DI V VIN +P ++Y+HR Sbjct 349 VSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHR 408 Query 603 IGRVGRAERMGLAISLVATEKE-KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 +GR RA R GL+IS + T+++ ++ + + GK DG + + + Sbjct 409 VGRTARATRGGLSISFITTQRDIRLLHEIEDVVGKQLGAY----DGEMRDVNKDATKVFK 464 Query 662 IEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 N ++ + KV + K +KR Sbjct 465 ARRLANMKMADEGHEDKVQARKEQKKRAQERKR 497 Score = 102 bits (253), Expect = 2e-21, Method: Composition-based stats. Identities = 33/140 (24%), Positives = 54/140 (39%), Gaps = 20/140 (14%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+E+G+ + + + +PT +Q IP L G DVL AETGSGKT AF++P++ Sbjct 77 STFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPIL 136 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI-----------GSDGLC 110 + G+ + + ++ A G D L Sbjct 137 HRL---------GEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLG 187 Query 111 CQSREVKEWHGCRATKGLMK 130 + H AT G + Sbjct 188 QAKGLARRPHVVVATPGRIA 207 >sp|Q2U8K6|DBP5_ASPOR ATP-dependent RNA helicase dbp5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp5 PE=3 SV=1 Length=487 Score = 273 bits (698), Expect = 3e-82, Method: Composition-based stats. Identities = 107/514 (21%), Positives = 199/514 (39%), Gaps = 111/514 (22%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + K+ +DLGL I + ++ L V Sbjct 70 PNNPLYSVKSFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLNNPP------KNLVGQ 123 Query 259 SKAPDGYIVKSQHSGNAQVTQ-TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 S++ G + +++ T+ P+ALI+ P+RELA Q + I+ +++D Sbjct 124 SQSGTGKTAAFVLNALSRLDLSTEQAQKTPQALILAPTRELARQIVGVIQCMGQFLDGLN 183 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 + + A + +VVGTPG + D++ + ++++ LVLDEAD +L Sbjct 184 VSTAV-----PADTNSRHSKIESSVVVGTPGTVMDMIRKRVMVANKLKVLVLDEADNMLD 238 Query 378 -QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 QG D R+ +P K +QV++ SAT + V + + K + L+ E+ Sbjct 239 QQGLGDQCIRVKALLP------KDIQVVLFSATFPTH-VHQYASKFAPQANELTLQHEEL 291 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 + + + + + + D+ + + T Sbjct 292 TVEGIKQLYLDCSDEEDKYKTLVQLYGLLT------------------------------ 321 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 + +IIF +T+ +E+ + +G + L G + +R Sbjct 322 ---------VASSIIFVKTRASAAEIEKRMVAEG---------HTVASLTGGIEGSQRDA 363 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIGR 605 +++F+ G + LI T+V ARGID+ V VIN +P+ + Q Y+HRIGR Sbjct 364 VIDQFRAGQAKVLITTNVLARGIDVSTVSMVINYDIPELHQPGAPERQADFQTYLHRIGR 423 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 GR R+G++IS V+ +E +L++I+++ Sbjct 424 TGRFGRVGVSISFVSNREE-------------------------------WNMLNQIQQY 452 Query 666 LNCTISQVE-PDIKVPVDEFDGKVTYGQKRAAGG 698 NCTI +V+ D D + + +A G Sbjct 453 FNCTIQRVDTKDWDEVEDIIKKTIKNTRAQAQFG 486 Score = 87.5 bits (215), Expect = 9e-17, Method: Composition-based stats. Identities = 24/116 (21%), Positives = 51/116 (44%), Gaps = 7/116 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F ++G+ P I Q + M++ P+ IQ ++PL+L +++ +++G+GKT AF + Sbjct 77 VKSFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVL 136 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 + + + + Q KT + + DGL + Sbjct 137 NALSRLDLSTEQAQ-----KTPQALILAPTRELARQIVGVIQCMGQFLDGLNVSTA 187 >sp|Q59W52|PRP28_CANAL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PRP28 PE=3 SV=2 Length=581 Score = 276 bits (705), Expect = 3e-82, Method: Composition-based stats. Identities = 98/424 (23%), Positives = 181/424 (43%), Gaps = 71/424 (17%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ-------HSGN 274 + ++ A + K V +++ G + S + Sbjct 183 ISQLGYEEPTSVQRASIPLAL--------KKRDVVGVAETGSGKTLAFLIPVLNYILSID 234 Query 275 AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 + + + N P LI+ P+RELA Q ++F K + + L IIGG +D ++ Sbjct 235 ENYLKYEKISNEPVGLILAPTRELALQITKEAEKFCKKLG---YQVLPIIGGHHYQDTIN 291 Query 335 VL-ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 + + GV ++V TPGRL D + ++LS+ LV+DEAD ++ G+ +N++ +++P Sbjct 292 KIDQTGVHLIVATPGRLVDSIERKIVDLSKCYCLVMDEADRMIDMGFEKDLNKVLDKLPT 351 Query 394 VTS----------DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 ++ ++ +AT+ S V+KL++K + P ++ + G D + Sbjct 352 EKQLSSTIDGRIFHLEKRSTMMFTATI-SPTVEKLTKKYLIDPGYLYIGGAGEALDNISQ 410 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 ++ T +++ IKI++ + V Sbjct 411 SFEFLSSAT---------------------------TEATKFNKLIKIIRSHWRVT---- 439 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + IIF K CD+L Q + + V +HG + R+Q + F+ Sbjct 440 -ENPLIIIFANFKHVCDSLSQEL---------SSNDINNVVIHGSKSQDMREQAITNFRN 489 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 + LI TDVAARGIDI V VIN + + Y+HRIGR GRA +G + + ++ + Sbjct 490 HESEVLIATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQD 549 Query 624 EKVW 627 +++ Sbjct 550 TEIF 553 Score = 97.5 bits (241), Expect = 9e-20, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 ++E + ++ + ++ + PT +Q SIPL L DV+ AETGSGKT AF IPV+ Sbjct 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNY 229 Query 64 VYETLKD-QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + ++ + K + + + + F Sbjct 230 ILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKF 269 >sp|Q0CZN5|DRS1_ASPTN ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=drs1 PE=3 SV=1 Length=821 Score = 281 bits (719), Expect = 5e-82, Method: Composition-based stats. Identities = 104/452 (23%), Positives = 180/452 (40%), Gaps = 67/452 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 ++ ++ L+ I + ++ + V + G Sbjct 304 RSFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVAL--------LGKDIVGSAVTGSGKT 355 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + I+ P+RELA Q N + Y D + ++GG Sbjct 356 AAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTD---ITFCQLVGG 412 Query 327 VAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + R+Q ++L+ D+++ TPGR +D + ++ + + LVLDEAD +L G++D +N Sbjct 413 FSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELN 472 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IP K Q ++ SAT+ V KL ++ P + + + + T+ Sbjct 473 EILTTIP------KSRQTMLFSATMTDT-VDKLIRVGLNRPVRLMVDSKKNTSLTLVQEF 525 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + P R +RLG Y + KE Sbjct 526 VRLRP--GREDKRLG-----------------------------------YLLYLCKEIY 548 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + I+F R K + + F G LHG +R +++E F+ G Sbjct 549 TGRVIVFFRQKREAHRVRIVFGLLG---------LKAAELHGSMSQEQRIKSVENFRDGK 599 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V FL+ TD+A+RG+DI GV VIN P + Y+HR+GR RA R G A ++ A K Sbjct 600 VAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRK 659 Query 626 VWY-HVCSSRGKGCY-NTRLKEDGGCTIWYNE 655 V V +S+ +G +R+ + W + Sbjct 660 VVKAAVKASKAQGAKVASRVVDPAVADQWAKK 691 Score = 108 bits (270), Expect = 5e-23, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 54/111 (49%), Gaps = 6/111 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P++ Sbjct 304 RSFQEFNLSRPILRGLAAVNFTNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL 363 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 + + +K T+ + + Y+ + A +D CQ Sbjct 364 ERLLFRP------RKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQ 408 >sp|A1CIQ5|HAS1_ASPCL ATP-dependent RNA helicase has1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=has1 PE=3 SV=1 Length=625 Score = 276 bits (706), Expect = 5e-82, Method: Composition-based stats. Identities = 85/429 (20%), Positives = 158/429 (37%), Gaps = 72/429 (17%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 LGL+ + + ++ + + +K G + Sbjct 148 LGLSEKTLKAINEMGFETMTEIQRRTIPPLLA--------GRDVLGAAKTGSGKTLSFLI 199 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ +F P N L+V P+RELA Q ++ ++ ++IGG R Sbjct 200 PAVEMLSALRFKPRNGTGVLVVSPTRELALQIFGVARELCQHHSQTY---GIVIGGANRR 256 Query 331 DQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 + L GV++++ TPGRL D + +T ++ LV+DEAD +L G+ D + ++ Sbjct 257 AEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVK 316 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLK--GEDSVPDTVHHVVV 446 +P + Q ++ SAT + V+ L+ + P ++++ E S + + V Sbjct 317 ILP-----SEERQTMLFSAT-QTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYV 370 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + +K + Sbjct 371 ICEADK----------------------------------------RFLLLFSFLKRNLK 390 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I+F + + + LHG +K +R F Sbjct 391 KKIIVFFSSCNCVKYHAELL---------NYIDLPVLELHGKQKQQKRTNTFFEFCNAKQ 441 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR-AERMGLAISLVATEKEK 625 LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R A G ++ + + Sbjct 442 GTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGANAKGRSLMFLQPSEVG 501 Query 626 VWYHVCSSR 634 H+ +R Sbjct 502 FLKHLKEAR 510 Score = 107 bits (266), Expect = 9e-23, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 50/93 (54%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G+ + +A+ EM + T+IQ +IP +L G DVL AA+TGSGKT +F IP +++ Sbjct 145 FTELGLSEKTLKAINEMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEM 204 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + G T S + + + Sbjct 205 LSALRFKPRNG-----TGVLVVSPTRELALQIF 232 >sp|Q27268|DX39B_DROME ATP-dependent RNA helicase WM6 OS=Drosophila melanogaster OX=7227 GN=Hel25E PE=1 SV=1 Length=424 Score = 270 bits (690), Expect = 6e-82, Method: Composition-based stats. Identities = 114/500 (23%), Positives = 192/500 (38%), Gaps = 108/500 (22%) Query 183 GEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNF 242 +E D G Y+ I S +D L EI + + +++ + Sbjct 23 NQEAPKKDVKGTYVSIH------SSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIP--- 73 Query 243 GEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQ 301 G L +A G K+ A + Q + N L++ +RELA Q Sbjct 74 -------QAVLGMDILCQAKSGM-GKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQ 125 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLN 360 ++F KY+ P ++ + GG+A + L++G IVVGTPGR+ L+ KLN Sbjct 126 ISKEYERFSKYM--PTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLN 183 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 L ++ VLDE D +L + R +I + T GK QV++ SATL S D++ + + Sbjct 184 LKLLKHFVLDECDKMLE---QLDMRRDVQEIFRSTPHGK--QVMMFSATL-SKDIRPVCK 237 Query 421 KIMHFPTWVDLKGEDS-VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 K M P V + E + V + Sbjct 238 KFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENE--------------------------- 270 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 K + + + +Q +IF ++ C L Q +Q Sbjct 271 -------------KNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQ---------N 308 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 F + +H ER ++FK R L+ T++ RG+DI V V N +P++ Y Sbjct 309 FPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTY 368 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 +HR+ R GR GLAI+ V+ E N+ ++L Sbjct 369 LHRVARAGRFGTKGLAITFVSDE-------------------------------NDAKIL 397 Query 660 SEIEEHLNCTISQVEPDIKV 679 +E+++ + IS++ +I + Sbjct 398 NEVQDRFDVNISELPEEIDL 417 Score = 79.8 bits (195), Expect = 2e-14, Method: Composition-based stats. Identities = 27/123 (22%), Positives = 54/123 (44%), Gaps = 1/123 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + + PEI +A+ + + P+++Q E IP + G D+L A++G GKT F + + Sbjct 41 SGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATL 100 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQ-MNPYDRGSAFAIGSDGLCCQSREVKEWH 120 Q + + + T + + +++ + Y A+ G+ Q E Sbjct 101 QQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKS 160 Query 121 GCR 123 G Sbjct 161 GTP 163 >sp|A2QAX7|DRS1_ASPNC ATP-dependent RNA helicase drs1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=drs1 PE=3 SV=1 Length=824 Score = 281 bits (718), Expect = 6e-82, Method: Composition-based stats. Identities = 111/533 (21%), Positives = 199/533 (37%), Gaps = 86/533 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 ++ ++ L+ I + ++ + V + G Sbjct 309 RSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVAL--------LGKDIVGSAVTGSGKT 360 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + I+ P+RELA Q N + Y D + ++GG Sbjct 361 AAFVVPILERLLFRPRKVPTSRVAILMPTRELAVQCYNVATKLATYTD---ITFCQLVGG 417 Query 327 VAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + R+Q ++L+ D+++ TPGR +D + ++ + + LVLDEAD +L G++D +N Sbjct 418 FSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADELN 477 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IP K Q ++ SAT+ V KL ++ P + + + + T+ Sbjct 478 EILTTIP------KSRQTMLFSATMTDT-VDKLIRVGLNRPVRLMVDAKKNTAVTLVQEF 530 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + P R +RLG Y + KE Sbjct 531 VRLRP--GREDKRLG-----------------------------------YLLYLCKEIY 553 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + I+F R K + + F G LHG + ++E F++G Sbjct 554 TGRVIVFFRQKKEAHRVRIIFGLLG---------LKAAELHGSMSQEQ---SVENFREGK 601 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 FL+ TD+A+RG+DI GV VIN P + Y+HR+GR RA R G A ++ A K Sbjct 602 AAFLLATDLASRGLDIKGVETVINYEAPQSHEIYLHRVGRTARAGRSGRACTIAAEPDRK 661 Query 626 VWYHVCSSRGKG--CYNTRLKEDGGCTIWYNEMQLLSEI------EEHLNCTISQVEPDI 677 V + +R+ E W + + L++ EE L ++Q E + Sbjct 662 VVKAAVKAGKSQGAKIASRVIEPAVADSWAAKAEELADEVEEVLSEEKLEKQLAQAEMQV 721 Query 678 KV---------PVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKE 721 + + + +R G ++ P ++ EK+ Sbjct 722 TKGENLIKHEAEIKSRPKRTWFETERDKKAARKLGAAELNGPDA-GMSKKEKQ 773 Score = 107 bits (266), Expect = 1e-22, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 54/111 (49%), Gaps = 6/111 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E + I + + +++ PT IQ ++IP+ L G D++ +A TGSGKT AF +P++ Sbjct 309 RSFQEFNLSRPILRGLAGVNFSNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPIL 368 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 + + +K T+ + + Y+ + A +D CQ Sbjct 369 ERLLFRP------RKVPTSRVAILMPTRELAVQCYNVATKLATYTDITFCQ 413 >sp|Q4E162|IF4A_TRYCC Probable eukaryotic initiation factor 4A OS=Trypanosoma cruzi (strain CL Brener) OX=353153 GN=Tc00.1047053511585.190 PE=3 SV=1 Length=404 Score = 269 bits (688), Expect = 6e-82, Method: Composition-based stats. Identities = 113/445 (25%), Positives = 190/445 (43%), Gaps = 70/445 (16%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIV 267 +D + P ++ F L L+ ++ G E+ + V ++ D Sbjct 10 QDQDSFLDDQPGIRPIPSFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQ 69 Query 268 KSQHSGNA------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR-E 320 +G + + F N + L++ P+RELA QT I + +++ Sbjct 70 AQSGTGKTGAFSIGLLQRLDFRHNVLQGLVLSPTRELALQTAEVITRIGEFLAEGNSSFC 129 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGY 380 +GG +D L+ G + VGTPGR+ D+ G + +R LVLDEAD +LSQG+ Sbjct 130 ATFVGGTRVQDDYRKLQAGSIVAVGTPGRVVDVTKRGAMRTEHLRVLVLDEADEMLSQGF 189 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 ++ I + +P K +QV + SAT+ DV +L++K M PT + +K E + Sbjct 190 AEQIYEIFRYLP------KEIQVALFSATMPD-DVLELTKKFMRDPTRILVKRESLTLEG 242 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + + V + K + + Sbjct 243 IKQYFIAVEEEH----------------------------------------KLDTLMDL 262 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 + + Q++IF T+ D L Q Q + C+H + +R++ + Sbjct 263 YETVSIAQSVIFANTRRKVDWLAQQLNQ---------SNHTVSCMHSEMPKQDREKVMST 313 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G R L+ TD+ ARGID+H V VIN LP K++Y+HRIGR GR R G+AI+ V Sbjct 314 FRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKESYLHRIGRGGRYGRKGVAINFVT 373 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKE 645 + +V + S Y+T++ E Sbjct 374 QKDVEVLREIESH-----YHTQIDE 393 Score = 88.6 bits (218), Expect = 2e-17, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 60/154 (39%), Gaps = 17/154 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F +M + + + + + P+ IQ +I GGD++ A++G+GKTGAFSI + Sbjct 25 IPSFDDMPLHQNLLRGIYSHGFEKPSSIQQRAIVPFTRGGDIIAQAQSGTGKTGAFSIGL 84 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA----FAIGSDGLCC----Q 112 +Q + Q S + + + + A G+ C Sbjct 85 LQRLDFRHNVLQ---------GLVLSPTRELALQTAEVITRIGEFLAEGNSSFCATFVGG 135 Query 113 SREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCR 146 +R ++ +A + G V +G R Sbjct 136 TRVQDDYRKLQAGSIVAVGTPGRVVDVTKRGAMR 169 >sp|Q1EB85|DBP5_COCIM ATP-dependent RNA helicase DBP5 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP5 PE=3 SV=1 Length=495 Score = 272 bits (696), Expect = 7e-82, Method: Composition-based stats. Identities = 102/438 (23%), Positives = 176/438 (40%), Gaps = 79/438 (18%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + K+ ++LGLA I + ++ L +A Sbjct 84 PNNPLYSIKSFEELGLAEPIQMGLSKMNFRRPSKIQERALPLLMANPP------TNMIAQ 137 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S++ G + +++ T +P+AL++ PSRELA Q + I+ +++ + Sbjct 138 SQSGTGKTAAFVLNILSRLELTPEKQKSPQALVLAPSRELARQIVGVIQAMGTFVEGLFV 197 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS- 377 + + IVVGTPG + DL+ N +R LVLDEAD +L Sbjct 198 ATAV------PMEMNRNQRVEASIVVGTPGTVQDLIKKRLFNTQHLRVLVLDEADNMLDQ 251 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 QG D R+ + +P + +QV++ SAT F V+ + K + LK E+ Sbjct 252 QGLGDQCIRVKSLLP------RTIQVVLFSATFPDFVVR-YAHKFAPNSNQLTLKHEELT 304 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + + + + K E Sbjct 305 VEGIKQLYLDCESDEH---------------------------------------KYEIL 325 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 V+ + +IIF +T+ +E+ + +G + V L G + +R + Sbjct 326 VKFYGLLTIGSSIIFVKTRASAAEIERRMVAEG---------HTVVSLTGGIEGQKRDEI 376 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----------EKQNYVHRIGRV 606 ++RF+ G + LI T+V ARGID+ V VIN +P+ + Q Y+HRIGR Sbjct 377 IDRFRNGTAKVLITTNVLARGIDVSTVSMVINYDIPELHLPGAARRMADAQTYLHRIGRT 436 Query 607 GRAERMGLAISLVATEKE 624 GR R+G+A+S V+ ++E Sbjct 437 GRFGRVGVAVSFVSNQEE 454 Score = 82.1 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 53/120 (44%), Gaps = 8/120 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ I + +M++ P+ IQ ++PL++ +++ +++G+GKT AF + Sbjct 91 IKSFEELGLAEPIQMGLSKMNFRRPSKIQERALPLLMANPPTNMIAQSQSGTGKTAAFVL 150 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ + T + Q K+ + + A +GL + E Sbjct 151 NILSRLELTPEKQ------KSPQALVLAPSRELARQIVGVIQAMGTFVEGLFVATAVPME 204 >sp|A7F4L5|DRS1_SCLS1 ATP-dependent RNA helicase drs1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=drs1 PE=3 SV=1 Length=801 Score = 280 bits (716), Expect = 9e-82, Method: Composition-based stats. Identities = 106/481 (22%), Positives = 183/481 (38%), Gaps = 78/481 (16%) Query 226 ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA------------PDGYIVKSQHSG 273 + F + L L+ F P + A G Sbjct 268 STFQSMSLSRPILR-GLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFIVPV 326 Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 ++ + I+ P+RELA Q + + D ++ L +GG++ + Q Sbjct 327 LERLLYRPKKVPTSRVAILMPTRELAIQCHAVATKLASHTD---IKFCLAVGGLSLKVQE 383 Query 334 SVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 + L D+++ TPGR +D + ++ + + LVLDEAD +L G++D +N + IP Sbjct 384 AELRLRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEAGFADELNEILTTIP 443 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 K Q ++ SAT+ S V L ++ P + + + S T+ + + P Sbjct 444 ------KSRQTMLFSATM-SSSVDNLIRVGLNRPVRLLVDSQKSTAGTLTQEFIRLRPGR 496 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 + + Y + D+ I+F Sbjct 497 EG-------------------------------------KRMGYLLYLCANVYTDRVIVF 519 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 R K + F G LHG +R +++E F+ G FL+ T Sbjct 520 FRQKKEAHRARIIFGLSG---------LKATELHGSMSQEQRIKSVEAFRDGKASFLLAT 570 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY-HVC 631 D+A+RG+DI GV VIN P Y+HR+GR RA R G A ++ A KV V Sbjct 571 DLASRGLDIKGVDTVINYEAPQSHDIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVK 630 Query 632 SSRGKGCY-NTRLKEDGGCTIWYNEMQLLS------EIEEHLNCTISQVEPDIKVPVDEF 684 +SR +G +R+ E W ++ ++ EE + ++Q E +++ + Sbjct 631 ASRTQGAKVVSRVIEASEADSWSEKVDEMADEIEEILKEEKEDKILAQAEMEVRKGQNFM 690 Query 685 D 685 D Sbjct 691 D 691 Score = 107 bits (268), Expect = 7e-23, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 6/106 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F M + I + + + + PT IQ+++IP+ L G DV+ A TGSGKT AF +PV+ Sbjct 268 STFQSMSLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFIVPVL 327 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + K K T+ + + + + A +D Sbjct 328 ERLLYRPK------KVPTSRVAILMPTRELAIQCHAVATKLASHTD 367 >sp|Q4IEK8|HAS1_GIBZE ATP-dependent RNA helicase HAS1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=HAS1 PE=3 SV=2 Length=591 Score = 275 bits (702), Expect = 9e-82, Method: Composition-based stats. Identities = 88/444 (20%), Positives = 162/444 (36%), Gaps = 79/444 (18%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL--------- 258 NG L L P F L +K E +F + + Sbjct 100 NGGQLTLP---PVAGAEAQSFEELKLSEKTMK-AINEMKFTKMTEIQRRGIPPSLAGRDV 155 Query 259 ---SKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 +K G + ++ +F P N ++V P+RELA Q ++ + Sbjct 156 LGAAKTGSGKTLAFLIPVIEMLSSLRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHS 215 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 ++IGG R + L GV++++ TPGRL D + ++ LV+DEAD Sbjct 216 QTY---GIVIGGANRRAEAEKLAKGVNLLIATPGRLLDHLQNTPFVFKNLKSLVIDEADR 272 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKG 433 +L G+ D + ++ +P+ + Q ++ SAT + V+ L+ + P ++++ Sbjct 273 ILEIGFEDEMRQIIKVLPK-----EDRQTMLFSAT-QTTKVEDLARISLRPGPLYINVDE 326 Query 434 ED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E S + + + Sbjct 327 EKQYSTVEGLEQGYIICETD---------------------------------------- 346 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 ++ +K + + I+F + + + LHG +K Sbjct 347 MRFLLLFSFLKRNLKKKIIVFFSSCACVKYHAELL---------NYIDLPVLDLHGKQKQ 397 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR-AE 610 +R F LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R + Sbjct 398 QKRTNTFFEFCNAKQGTLICTDVAARGLDIPSVDWIIQFDPPDDPRDYIHRVGRTARGSN 457 Query 611 RMGLAISLVATEKEKVWYHVCSSR 634 G ++ + + H+ ++R Sbjct 458 NKGRSLMFLQPNELGFLSHLKAAR 481 Score = 107 bits (268), Expect = 5e-23, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 5/94 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+ + + +A+ EM + T+IQ IP L G DVL AA+TGSGKT AF IPVI+ Sbjct 116 SFEELKLSEKTMKAINEMKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIE 175 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 ++ + G T S + + + Sbjct 176 MLSSLRFKPRNG-----TGVIVVSPTRELALQIF 204 >sp|P44701|SRMB_HAEIN ATP-dependent RNA helicase SrmB OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=srmB PE=3 SV=1 Length=439 Score = 270 bits (690), Expect = 1e-81, Method: Composition-based stats. Identities = 102/484 (21%), Positives = 180/484 (37%), Gaps = 78/484 (16%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKA-PDGYIVKSQHSGNAQ------------VTQTK 281 + EL ++ + P A+ A + ++ S +G + + + Sbjct 12 SPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQHLLDYPR 71 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD 341 P P+ L++ P+RELA Q ++ ++ L I GGVA ++ V D Sbjct 72 RKPGPPRILVLTPTRELAMQVAEQAEELAQFTH---LNIATITGGVAYQNHGDVFNTNQD 128 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 +VV TPGRL + + V L+ DEAD +L G+ ++ R Sbjct 129 LVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKI------AAETRWRK 182 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 Q ++ SATL + +E++++ P VD + ++ + ++ Sbjct 183 QTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKI------ 236 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + R I+ ++ + I+F R + D Sbjct 237 ---------------------------------KLLARFIETEEVTRGIVFIRRREDARE 263 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 L + ++G L G+ +R +++ K G V L+ TDVAARGIDI Sbjct 264 LSETLRKRG---------IRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVATDVAARGIDI 314 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW-------YHVCSSR 634 V +V+N LP Y+HRIGR RA + G A+S V K+ + +R Sbjct 315 DDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLLGKIKRYTEEILKAR 374 Query 635 GKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 R K + + + I+E + E KV + D K +++ Sbjct 375 ILAGLEPRTKPPKDGEVKSVSKKQKARIKEK-REEKKKTEAKKKVKLRHKDTKNIGKRRK 433 Query 695 AAGG 698 + Sbjct 434 PSNS 437 Score = 106 bits (265), Expect = 3e-23, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 51/103 (50%), Gaps = 5/103 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ F + + PE+ +A+E+ + PT IQ E+IP + DVL +A TG+GKT AF +P Sbjct 3 LSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPA 62 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +Q + + + +K + + M ++ A Sbjct 63 LQHLLDYPR-----RKPGPPRILVLTPTRELAMQVAEQAEELA 100 >sp|Q6CEB8|DRS1_YARLI ATP-dependent RNA helicase DRS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DRS1 PE=3 SV=1 Length=753 Score = 278 bits (711), Expect = 2e-81, Method: Composition-based stats. Identities = 106/513 (21%), Positives = 186/513 (36%), Gaps = 72/513 (14%) Query 175 HNKQFDNYGEEFTMHDTIGCYL---DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPAC 231 H + G + T + Y + + K + L L+ + + Sbjct 217 HKGPAIDEGPQDTAEEMAAFYAPEEENNDKTESVHKTFQTLNLSRPVMKGISALGYQAPT 276 Query 232 VLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI 291 +++ + G V S YI+ + ++ A K ++ Sbjct 277 PIQSRTIPIAL----MGKDLVAGAVTGSGKTAAYIIPVLERLLYKSSKVA----ATKVVV 328 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 + P+REL+ Q + K+ +Y+ +R L +GG+ R Q L+ ++V+ TPGR Sbjct 329 LTPTRELSIQVADVGKKLAQYVSG--VRFGLAVGGLNLRVQEQELKTRPEVVIATPGRFI 386 Query 352 DLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 D V ++ N+ V LV+DEAD +L +G+ + + +P K+ Q ++ SAT+ Sbjct 387 DHVRNSPSFNVDDVEILVIDEADRMLEEGFQQELTEILTLLP------KKRQTLLFSATM 440 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 +S + + P V + + V + + L + D Sbjct 441 NSSISSLIQLSLSR-PVRVMINPPKQAASGLVQEFVRIRKRDHLKPALLASILKKMD--- 496 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 K + IIF K L G Sbjct 497 ----------------------------------KEQRTIIFVARKETAHRLRIMLGLLG 522 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 LHG +R Q++ FKK +V L+CTD+A+RG+DI + V+N Sbjct 523 ---------VRIGELHGALSQEQRLQSITAFKKLEVPILVCTDLASRGLDIPKIECVVNY 573 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVAT--EKEKVWYHVCSSRGKGCYNTRLKEDGG 648 +P Y+HR+GR RA R G +I+LV + S + + K G Sbjct 574 DMPQTHAVYLHRVGRTARAGREGRSITLVGEAAADRAIVREAIKSVSESK---QGKAVGR 630 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 W +L S+IEE + + + + Sbjct 631 NVDWPEVEKLYSKIEEKGDIVNEILAEEKEEKA 663 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 6/108 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + + + + + + PT IQ+ +IP+ L G D++ A TGSGKT A+ IPV+ Sbjct 252 KTFQTLNLSRPVMKGISALGYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVL 311 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + + K T + + + D G A G+ Sbjct 312 ERLLY------KSSKVAATKVVVLTPTRELSIQVADVGKKLAQYVSGV 353 >sp|Q0CNX1|DBP8_ASPTN ATP-dependent RNA helicase dbp8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp8 PE=3 SV=1 Length=527 Score = 272 bits (695), Expect = 2e-81, Method: Composition-based stats. Identities = 103/477 (22%), Positives = 171/477 (36%), Gaps = 51/477 (11%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 + K L +A + + A+ ++ A + + + S+ G Sbjct 86 SSFKALNVAPWLIGSLTTMAVRKPTAIQRACIP--------EILKGRDCIGGSRTGSGKT 137 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + + + P A+++ P+RELA Q +QFK ++ +LI GG Sbjct 138 IAFAVPI---LQKWAEDPFGIFAVVLTPTRELALQIY---EQFKAISAPQSMKPVLITGG 191 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSD 382 R Q L +V+ TPGRL D + T + L +VR +VLDEAD LL+ G Sbjct 192 TDMRPQALALSQRPHVVIATPGRLADHIQTSGEDTVRGLKRVRMVVLDEADRLLAPGPGS 251 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + + + + Q ++ +AT+ +V+ L S V Sbjct 252 MLPDVETCLSALPPSSE-RQTLLFTATVTP-EVRALKS-----------MPRASTKPPVF 298 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + G + D K P + + + + Sbjct 299 VTEIEAG----------GTTSAGADGAAPKSTLPPTLKQTYLKVPMTHREAFLHVLLSTD 348 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + AIIFC D + LH ER NL RF+ Sbjct 349 GNAGKPAIIFCNHTKTADL---------LERLLRRLAHRVTSLHSLLPQSERSSNLARFR 399 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 R L+ TDVA+RG+DI V V+N +P +YVHR+GR RA R G A++LV Sbjct 400 ASAARILVATDVASRGLDIPSVALVVNYDVPRNPDDYVHRVGRTARAGRRGEAVTLVGQR 459 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 ++ + G+ +E +L E+ + ++E V Sbjct 460 DVQLVLAIEERVGRQMEEWS-EEGVSVEGRVVRTGVLKEVGSAKREALIEIEEGRDV 515 Score = 99.8 bits (247), Expect = 1e-20, Method: Composition-based stats. Identities = 37/157 (24%), Positives = 61/157 (39%), Gaps = 20/157 (13%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++F + V P + ++ M PT IQ IP IL G D + + TGSGKT AF++P++ Sbjct 86 SSFKALNVAPWLIGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFAVPIL 145 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLCC 111 Q E + + + Y++ A + G + Sbjct 146 QKWAE---------DPFGIFAVVLTPTRELALQIYEQFKAISAPQSMKPVLITGGTDMRP 196 Query 112 QSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRV 147 Q+ + + H AT G + +GL RV Sbjct 197 QALALSQRPHVVIATPGRLADHIQTSGEDTVRGLKRV 233 >sp|Q03532|HAS1_YEAST ATP-dependent RNA helicase HAS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HAS1 PE=1 SV=1 Length=505 Score = 271 bits (693), Expect = 2e-81, Method: Composition-based stats. Identities = 90/510 (18%), Positives = 184/510 (36%), Gaps = 74/510 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++L L+ ++ ++ + + +K G + Sbjct 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLA--------GRDVLGAAKTGSGKTLA 95 Query 269 SQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + KF P N +++ P+RELA Q ++ ++ ++IGG Sbjct 96 FLIPAIELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQT---FGIVIGGA 152 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 R + L GV++++ TPGRL D + +T ++ L++DEAD +L G+ D + + Sbjct 153 NRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQ 212 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGE--DSVPDTVHH 443 + +P + Q ++ SAT + V+ L+ + P ++++ E +S D + Sbjct 213 IIKILP-----NEDRQSMLFSAT-QTTKVEDLARISLRPGPLFINVVPETDNSTADGLEQ 266 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V + + +K Sbjct 267 GYVVCDSDK----------------------------------------RFLLLFSFLKR 286 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 ++ + I+F + + + LHG +K +R F Sbjct 287 NQKKKIIVFLSSCNSVKYYAELL---------NYIDLPVLELHGKQKQQKRTNTFFEFCN 337 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATE 622 + LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R + G ++ + Sbjct 338 AERGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTKGKGKSLMFLTPN 397 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 + ++ +S+ E+ + ++++ L + +L+ T Sbjct 398 ELGFLRYLKASK-VPLNEYEFPENKIANV-QSQLEKLIKSNYYLHQTAKDGYRSYLQAYA 455 Query 683 EFDGKVTYGQKRAAGGGSYKGHVDILAPTV 712 K Y + K + + P V Sbjct 456 SHSLKTVYQIDKLDLAKVAKSYGFPVPPKV 485 Score = 105 bits (263), Expect = 1e-22, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 5/96 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E+ + +A+E+M + T +QA +IP +L G DVL AA+TGSGKT AF IP Sbjct 41 VEKFEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPA 100 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 I++++ + G T + + + + Sbjct 101 IELLHSLKFKPRNG-----TGIIVITPTRELALQIF 131 >sp|Q2HGF7|DBP5_CHAGB ATP-dependent RNA helicase DBP5 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP5 PE=3 SV=1 Length=479 Score = 270 bits (691), Expect = 2e-81, Method: Composition-based stats. Identities = 104/425 (24%), Positives = 170/425 (40%), Gaps = 78/425 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++LGLA I + ++ L +A S++ G Sbjct 74 FEELGLAKSINDGLLAMNFKKPSKIQEKALPLMLSNPP------RNMIAQSQSGTGKTAA 127 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + ++V TK P P+AL++ PSRELA Q + I+ ++ +N L I G Sbjct 128 FVLTVLSRVDLTK--PTQPQALLLAPSRELARQIQSVIQTIGQFCEN--LNVEAAIPGSI 183 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRM 387 +R+ ++VVGTPG + DL+ + ++SQ++ +V+DEAD +L QG D R+ Sbjct 184 SRETGVR----ANVVVGTPGTVMDLIRRRQFDVSQLKIMVIDEADNMLDQQGMGDQCVRV 239 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 +P K +Q ++ SAT V + K + L+ D + + + Sbjct 240 KGMLP------KDIQTLLFSATFP-EKVMIFARKYATNAHEIKLRHTDLTVKGISQMYMD 292 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + S+ IL Y + I Sbjct 293 CPDE----------------------------------SKKYDILCKLYGLMTI-----G 313 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 ++IF RT+ +++ G LHG + R L+ F+ G + Sbjct 314 SSVIFVRTRESASEIQRRMEADG---------HKVSALHGAHEGQNRDALLDDFRSGRSK 364 Query 568 FLICTDVAARGIDIHGVPYVINVTLP--------DEKQNYVHRIGRVGRAERMGLAISLV 619 LI T+V ARGID+ V VIN +P + + Y+HRIGR GR R+G++IS V Sbjct 365 VLITTNVLARGIDVSSVSMVINYDIPMKGPGDKEPDMETYLHRIGRTGRFGRVGVSISFV 424 Query 620 ATEKE 624 K Sbjct 425 YDRKS 429 Score = 82.9 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 26/133 (20%), Positives = 54/133 (41%), Gaps = 13/133 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 +A+F E+G+ I + M++ P+ IQ +++PL+L +++ +++G+GKT AF + Sbjct 71 VASFEELGLAKSINDGLLAMNFKKPSKIQEKALPLMLSNPPRNMIAQSQSGTGKTAAFVL 130 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQS---RE 115 V+ V T K + + + L ++ Sbjct 131 TVLSRVDLT--------KPTQPQALLLAPSRELARQIQSVIQTIGQFCENLNVEAAIPGS 182 Query 116 VKEWHGCRATKGL 128 + G RA + Sbjct 183 ISRETGVRANVVV 195 >sp|A6RUH2|DRS1_BOTFB ATP-dependent RNA helicase drs1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=drs1 PE=3 SV=1 Length=801 Score = 279 bits (713), Expect = 2e-81, Method: Composition-based stats. Identities = 101/450 (22%), Positives = 170/450 (38%), Gaps = 72/450 (16%) Query 226 ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA------------PDGYIVKSQHSG 273 F + L L+ F P + A G Sbjct 268 TTFQSMSLSRPILR-GLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFVVPV 326 Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 ++ + I+ P+RELA Q + + D ++ L +GG++ + Q Sbjct 327 LERLLYRPKKVPTSRVAILMPTRELAIQCHAVATKLASHTD---IKFCLAVGGLSLKVQE 383 Query 334 SVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 + L D+++ TPGR +D + ++ + + LVLDEAD +L G++D +N + IP Sbjct 384 AELRLRPDVIIATPGRFIDHMRNSPSFTVDTLEILVLDEADRMLEAGFADELNEILTTIP 443 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 K Q ++ SAT+ S V L ++ P + + + S T+ + + P Sbjct 444 ------KSRQTMLFSATM-SSSVDNLIRVGLNRPVRLLVDSQKSTAGTLVQEFIRLRPGR 496 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 + + Y + D+ I+F Sbjct 497 EG-------------------------------------KRMGYLLYLCANVYTDRVIVF 519 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 R K + F G LHG +R +++E F+ G FL+ T Sbjct 520 FRQKKEAHRARIIFGLSG---------LKATELHGSMSQEQRIKSVEAFRDGKASFLLAT 570 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY-HVC 631 D+A+RG+DI GV VIN P Y+HR+GR RA R G A ++ A KV V Sbjct 571 DLASRGLDIKGVDTVINYEAPQSHDIYLHRVGRTARAGRSGRACTIAAEPDRKVVKAAVK 630 Query 632 SSRGKGCY-NTRLKEDGGCTIWYNEMQLLS 660 +SR +G +R+ E W ++ ++ Sbjct 631 ASRTQGAKVVSRVIEASEADSWSEKVDEMA 660 Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 6/106 (6%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F M + I + + + + PT IQ+++IP+ L G DV+ A TGSGKT AF +PV+ Sbjct 268 TTFQSMSLSRPILRGLATVGFTQPTPIQSKTIPVALLGKDVVGGAVTGSGKTAAFVVPVL 327 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + K K T+ + + + + A +D Sbjct 328 ERLLYRPK------KVPTSRVAILMPTRELAIQCHAVATKLASHTD 367 >sp|A1CW14|HAS1_NEOFI ATP-dependent RNA helicase has1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=has1 PE=3 SV=1 Length=622 Score = 274 bits (701), Expect = 2e-81, Method: Composition-based stats. Identities = 85/429 (20%), Positives = 158/429 (37%), Gaps = 72/429 (17%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 LGL + + + ++ + + +K G + Sbjct 145 LGLTEKTLKAINDMGFDTMTEIQRRTIPPLLA--------GRDVLGAAKTGSGKTLSFLI 196 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ +F P N ++V P+RELA Q ++ +Y ++IGG R Sbjct 197 PAVEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTY---GIVIGGANRR 253 Query 331 DQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 + L GV++++ TPGRL D + +T ++ LV+DEAD +L G+ D + ++ Sbjct 254 AEAEKLMKGVNLLIATPGRLLDHLQNTQGFIFKNLKTLVIDEADRILEVGFEDEMRQIVK 313 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLK--GEDSVPDTVHHVVV 446 +P + Q ++ SAT + V+ L+ + P ++++ E S + + V Sbjct 314 ILP-----SEERQTMLFSAT-QTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYV 367 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + +K + Sbjct 368 ICEADK----------------------------------------RFLLLFSFLKRNLK 387 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I+F + + + LHG +K +R F Sbjct 388 KKIIVFFSSCNCVKYHAELL---------NYIDLPVLELHGKQKQQKRTNTFFEFCNAKQ 438 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR-AERMGLAISLVATEKEK 625 LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R A G ++ + + Sbjct 439 GTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGANAKGRSLMFLQPSEVG 498 Query 626 VWYHVCSSR 634 H+ +R Sbjct 499 FLKHLKEAR 507 Score = 104 bits (259), Expect = 6e-22, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 50/93 (54%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G+ + +A+ +M + T+IQ +IP +L G DVL AA+TGSGKT +F IP +++ Sbjct 142 FTELGLTEKTLKAINDMGFDTMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEM 201 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + G T S + + + Sbjct 202 LSALRFKPRNG-----TGVIVVSPTRELALQIF 229 >sp|P54475|CSHB_BACSU DEAD-box ATP-dependent RNA helicase CshB OS=Bacillus subtilis (strain 168) OX=224308 GN=cshB PE=1 SV=1 Length=438 Score = 269 bits (687), Expect = 2e-81, Method: Composition-based stats. Identities = 104/466 (22%), Positives = 179/466 (38%), Gaps = 69/466 (15%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQTKFLPNAPKALIVEPS 295 G E K A+ K +G + + + + +I P+ Sbjct 22 LGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAPT 81 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS 355 RELA Q + + + ++R IGG + + L+ +VVGTPGR+ DL+ Sbjct 82 RELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQPHLVVGTPGRIADLIK 141 Query 356 TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV 415 L++ + LV+DEAD +L G+ ++ + +++P + LQ++V SAT+ + Sbjct 142 EQALSVHKAESLVIDEADLMLDMGFLADVDYIGSRMP------EDLQMLVFSATIP-EKL 194 Query 416 KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNT 475 K +K M P + ++ + + H+++P + Sbjct 195 KPFLKKYMENPKYAHVEPKQVTAAKIEHILIPSKHRD----------------------- 231 Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 K + + I+F TK D++ QY +G Sbjct 232 -----------------KDKLLFDIMSHLNPYLGIVFANTKNTADHIAQYLTGKG----- 269 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 LHG P ERK+ +++ + ++I TD+AARGIDI GV +VIN LPD+ Sbjct 270 ----MKIGLLHGGLTPRERKKVMKQINDLEFTYIIATDLAARGIDIKGVSHVINYELPDD 325 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT-------RLKEDGG 648 YVHR+GR RA G A+++ E + + Y + + Sbjct 326 LDFYVHRVGRTARAGSSGQAMTIYELTDEDALVRLEKMGIEFEYLELEKGEWKKGDDRQR 385 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 EI L +V+P K + K+ Q+R Sbjct 386 RKKRKKTPNEADEIAHRLVKKPKKVKPGYKKKMSYEMEKIKKKQRR 431 Score = 86.3 bits (212), Expect = 1e-16, Method: Composition-based stats. Identities = 65/377 (17%), Positives = 123/377 (33%), Gaps = 72/377 (19%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + P I AV + + PTDIQ IP +L V+ ++TG+GKT A+ +P++ Sbjct 4 TKFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLL 63 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + Q + + Y G +G Q R G Sbjct 64 NKIDPAKDVVQV---------VITAPTRELANQIYQEALKITQGEEG--SQIRSKCFIGG 112 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 K + K K + G R+ + +L + K+ + D Sbjct 113 TDKQKSIDKLKIQPHLVVGTPG--RIADLIKEQALSV-------------HKAESLVIDE 157 Query 182 YGEEFTMH-----DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA 236 M D IG + D + FS IP +K Sbjct 158 ADLMLDMGFLADVDYIGSRMPEDLQMLVFS---------ATIPEKLK------------P 196 Query 237 ELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK-ALIVEPS 295 LK ++ A + ++ S+H ++ P ++ + Sbjct 197 FLKKYMENPKYAHVEPKQVTAA--KIEHILIPSKHRDKDKLLFDIMSHLNPYLGIVFANT 254 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI----VVGTPGRLD 351 + N +Y+ ++ L+ GG+ R++ V++ D+ ++ T Sbjct 255 K-------NTADHIAQYLTGKGMKIGLLHGGLTPRERKKVMKQINDLEFTYIIAT----- 302 Query 352 DLVSTGKLNLSQVRFLV 368 DL + G +++ V ++ Sbjct 303 DLAARG-IDIKGVSHVI 318 >sp|Q5AK59|HAS1_CANAL ATP-dependent RNA helicase HAS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=HAS1 PE=3 SV=1 Length=565 Score = 273 bits (697), Expect = 3e-81, Method: Composition-based stats. Identities = 81/430 (19%), Positives = 157/430 (37%), Gaps = 73/430 (17%) Query 212 LGLAFEIP--PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 F P +K ++ + + +K G + Sbjct 111 ENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLA--------GRDVLGAAKTGSGKTLAF 162 Query 270 QHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + K P N +I+ P+RELA Q ++ ++ ++IGG Sbjct 163 LIPAIELLYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQFHSQT---CGIVIGGAD 219 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 R + + L GV+++V TPGRL D + + S ++ LV+DEAD +L G+ D + ++ Sbjct 220 RRQEATKLAKGVNLLVATPGRLLDHLKNTQFVFSNLKALVIDEADRILEIGFEDEMKQII 279 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGED--SVPDTVHHVV 445 +P + Q ++ SAT + V+ L+ + P ++++ E S D + Sbjct 280 KVLP-----NENRQSMLFSAT-QTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGY 333 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V + + +K + Sbjct 334 VVCDSDK----------------------------------------RFLLLFSFLKRNV 353 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + I+F + + + LHG +K +R F Sbjct 354 KKKIIVFLSSCNSVKFYSELL---------NYIDLPVLDLHGKQKQQKRTNTFFEFCNAK 404 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATEKE 624 L+CTDVAARG+DI V +++ PD+ ++Y+HR+GR R + G ++ + + Sbjct 405 QGILVCTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGTQGKGKSLMFLTPSEL 464 Query 625 KVWYHVCSSR 634 ++ +++ Sbjct 465 GFLRYLKAAK 474 Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 47/93 (51%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +A++EM + T +QA++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 110 FENADFSEPTMKAIKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 169 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +Y + G T + + + + Sbjct 170 LYSLKIKPRNG-----TAVIIITPTRELALQIF 197 >sp|Q65RG7|RHLB_MANSM ATP-dependent RNA helicase RhlB OS=Mannheimia succiniciproducens (strain MBEL55E) OX=221988 GN=rhlB PE=3 SV=1 Length=417 Score = 268 bits (685), Expect = 3e-81, Method: Composition-based stats. Identities = 104/439 (24%), Positives = 175/439 (40%), Gaps = 65/439 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL L ++ +++ ++ L + ++ G + Sbjct 11 FADLPLNAKVLEALESNGFEYCTPIQALSLPISLA--------GKDVAGQAQTGTGKTMA 62 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + + N P+ALI+ P+RELA Q ++ ++ K L+ L GG Sbjct 63 FLTATFHHLLEHPVKTNHPRALIMAPTRELAVQIAHDAERMVK---TTGLKTALAYGGDG 119 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 QL +E G DI++GT GR+ D V + LS ++ +VLDEAD + G+ I + Sbjct 120 YDKQLKAIEAGADIIIGTTGRIIDYVKQNIIALSHIQVVVLDEADRMFDLGFIKDIRYLM 179 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + P K+ ++ SATL S+ V++L+ + M+ P +V+++ + Sbjct 180 RKCP----SPKQRLTLLFSATL-SYKVRELAFEDMNDPEYVEVEPLQKTGHRIK------ 228 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 E K + ++E ++ Sbjct 229 ----------------------------------EELFYPSNEDKMPLLITLLEEEWPER 254 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 IIF TK C+ + Y G L GD +R L++F G + Sbjct 255 CIIFANTKHQCEKIWGYLAADG---------HRVGLLTGDVAQKKRLSLLKQFTDGALDI 305 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 L+ TDVAARG+ I V +V N LPD++++YVHRIGR GRA G++IS E Sbjct 306 LVATDVAARGLHIPDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEEYAMNLP 365 Query 629 HVCSSRGKGCYNTRLKEDG 647 + G ++ D Sbjct 366 AIEEYIGHHIAVSQYDSDS 384 Score = 91.7 bits (226), Expect = 2e-18, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 6/92 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+++ + ++ +A+E + T IQA S+P+ L G DV A+TG+GKT AF Sbjct 11 FADLPLNAKVLEALESNGFEYCTPIQALSLPISLAGKDVAGQAQTGTGKTMAFLTATFHH 70 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 + E K + + + Sbjct 71 LLEHP------VKTNHPRALIMAPTRELAVQI 96 >sp|Q99MJ9|DDX50_MOUSE ATP-dependent RNA helicase DDX50 OS=Mus musculus OX=10090 GN=Ddx50 PE=2 SV=1 Length=734 Score = 277 bits (708), Expect = 3e-81, Method: Composition-based stats. Identities = 116/518 (22%), Positives = 205/518 (40%), Gaps = 69/518 (13%) Query 232 VLKNAELKFNFGEEEFKFPP---KDGFVALSKAPDGYIVKSQHSGNAQVTQTKF---LPN 285 +LK + + F + F P +A ++ G ++ + + Sbjct 148 LLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSR 207 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 +PK L++ P+RELA Q + K + KL GG + + Q++ + NG+DI+VG Sbjct 208 SPKVLVLAPTRELANQVAKDFKDITR-----KLSVACFYGGTSYQSQINQIRNGIDILVG 262 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ D + +G+L+LS++R +VLDE D +L G+++ + + ++ T Q ++ Sbjct 263 TPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHE-SYKTDSEDNPQTLL 321 Query 406 CSATLHSFDVKKLSEKIMH-FPTWVDLKGE--DSVPDTVHHVVVPVNPKTDRLWERLGKS 462 SAT + V K+++K M VDL G+ TV H+ + + Sbjct 322 FSATCPQW-VYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCH------------- 367 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 WS+ ++ V + E +AIIFC TK + + Sbjct 368 ----------------------WSQRPAVIGDVLQVYSGSE---GRAIIFCETKKNVTEM 402 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + + CLHGD +R+ L+ F++G + L+ T+VAARG+DI Sbjct 403 A----------MNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAARGLDIP 452 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V VI + P + ++Y+HR GR GRA R G+ + + +V G Sbjct 453 EVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVG 512 Query 643 LKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYK 702 + M + + + P + ++E A G+ Sbjct 513 VPSTMDLVK-SKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVDALAAALAHISGASS 571 Query 703 GHVDILAPTVQELA----ALEKEAQTSFLHLGYLPNQL 736 L + + +E Q L +L Sbjct 572 FEPRSLITSDKGFVTMTLESPEEIQDVSCAWKELNRKL 609 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 43/90 (48%), Gaps = 3/90 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AFS + E + ++ IQ ++ + G D++ A TG+GKT +F+IP+I+ Sbjct 135 AFSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIE 194 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQ 92 + ++Q+ KK ++ + + Sbjct 195 RLQ---RNQETIKKSRSPKVLVLAPTRELA 221 >sp|P0CR06|DBP10_CRYNJ ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP10 PE=3 SV=1 Length=802 Score = 278 bits (712), Expect = 3e-81, Method: Composition-based stats. Identities = 114/541 (21%), Positives = 193/541 (36%), Gaps = 81/541 (15%) Query 209 GKD--LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 G+ L + ++ + + ++ A + + +++ G Sbjct 27 GQWRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPP------RDILGMARTGSGKT 80 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK--------- 317 + Q T + P+ALI+ PSRELA Q K + ++ K Sbjct 81 LAYLIPLL-QRTGSTHHGQGPRALILCPSRELAVQIYTVGKDLARGMNKGKGKGKNKNED 139 Query 318 -----------LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 LR LIIGG Q + + DIV+ TPGR L+ ++L ++ Sbjct 140 EEDEEGKGKEGLRWALIIGGEGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQT 199 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 ++ DEAD L G+ + + +++P Q ++ SATL S V + ++ + P Sbjct 200 VIYDEADRLFEMGFDVQLQEILHRLPST------RQNLLFSATLPS-SVAEFAKAGLVNP 252 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 V L E + + V P E+ + +V K N A+ Sbjct 253 LLVRLDAEQKISPDLALKFFSVKP-----GEKEASLLVLLREVIGKPNQPEPADPS---- 303 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 QAI+F TK D + + G + ++ Sbjct 304 ------------------SAPQAIVFVATKHHVDYVAELLRTTG---------YRTSLIY 336 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 R+Q L F+ L+ TDVAARG+DI + +VIN P + +VHR+GR Sbjct 337 SSLDQVARQQQLAGFRSHQSDVLVVTDVAARGLDIPIMDHVINYDFPAGPRIFVHRVGRT 396 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL 666 RA R G A SL+ E + + G R+ E + ++ LSE E++ Sbjct 397 ARAGRKGTAYSLIVKEDFPYLCDLHTFLGT----ERMGEPADV-LRSLPIEQLSENVEYV 451 Query 667 NCTISQVEPDIKVPVDEFDGKVT-YGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTS 725 + + P I + + + R + LA L+ Sbjct 452 FHNLDETAPHITALRNVMRKGQGMFERSRTKANPTSYRQAKSLAS---ALSNNPPRIDDM 508 Query 726 F 726 F Sbjct 509 F 509 Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 28/105 (27%), Positives = 44/105 (42%), Gaps = 9/105 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 + + V P++ +++ + PT IQ +IP L D+L A TGSGKT A+ IP++ Sbjct 29 WRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIPLL 88 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 Q T G+ + + Y G A G Sbjct 89 QRTGSTHH-------GQGPRALILCPSRELAVQIYTVGKDLARGM 126 >sp|P0CR07|DBP10_CRYNB ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP10 PE=3 SV=1 Length=802 Score = 278 bits (712), Expect = 3e-81, Method: Composition-based stats. Identities = 114/541 (21%), Positives = 193/541 (36%), Gaps = 81/541 (15%) Query 209 GKD--LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 G+ L + ++ + + ++ A + + +++ G Sbjct 27 GQWRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPP------RDILGMARTGSGKT 80 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK--------- 317 + Q T + P+ALI+ PSRELA Q K + ++ K Sbjct 81 LAYLIPLL-QRTGSTHHGQGPRALILCPSRELAVQIYTVGKDLARGMNKGKGKGKNKNED 139 Query 318 -----------LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 LR LIIGG Q + + DIV+ TPGR L+ ++L ++ Sbjct 140 EEDEEGKGKEGLRWALIIGGEGMDAQFEKMSSNPDIVIATPGRFLHLIVEMHMDLRHLQT 199 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 ++ DEAD L G+ + + +++P Q ++ SATL S V + ++ + P Sbjct 200 VIYDEADRLFEMGFDVQLQEILHRLPST------RQNLLFSATLPS-SVAEFAKAGLVNP 252 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 V L E + + V P E+ + +V K N A+ Sbjct 253 LLVRLDAEQKISPDLALKFFSVKP-----GEKEASLLVLLREVIGKPNQPEPADPS---- 303 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 QAI+F TK D + + G + ++ Sbjct 304 ------------------SAPQAIVFVATKHHVDYVAELLRTTG---------YRTSLIY 336 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 R+Q L F+ L+ TDVAARG+DI + +VIN P + +VHR+GR Sbjct 337 SSLDQVARQQQLAGFRSHQSDVLVVTDVAARGLDIPIMDHVINYDFPAGPRIFVHRVGRT 396 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL 666 RA R G A SL+ E + + G R+ E + ++ LSE E++ Sbjct 397 ARAGRKGTAYSLIVKEDFPYLCDLHTFLGT----ERMGEPADV-LRSLPIEQLSENVEYV 451 Query 667 NCTISQVEPDIKVPVDEFDGKVT-YGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTS 725 + + P I + + + R + LA L+ Sbjct 452 FHNLDETAPHITALRNVMRKGQGMFERSRTKANPTSYRQAKSLAS---ALSNNPPRIDDM 508 Query 726 F 726 F Sbjct 509 F 509 Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 28/105 (27%), Positives = 44/105 (42%), Gaps = 9/105 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 + + V P++ +++ + PT IQ +IP L D+L A TGSGKT A+ IP++ Sbjct 29 WRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIPLL 88 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 Q T G+ + + Y G A G Sbjct 89 QRTGSTHH-------GQGPRALILCPSRELAVQIYTVGKDLARGM 126 >sp|A5DID7|HAS1_PICGU ATP-dependent RNA helicase HAS1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=HAS1 PE=3 SV=2 Length=569 Score = 273 bits (697), Expect = 3e-81, Method: Composition-based stats. Identities = 87/445 (20%), Positives = 162/445 (36%), Gaps = 73/445 (16%) Query 195 YLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG 254 Y D+ K +DLGL+ +K+ ++ + Sbjct 94 YAQADESTSGSDK-FEDLGLSEPTMRAIKDMGFEKMTKVQEKTIPPLLA--------GRD 144 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYI 313 + +K G + + KF P N ++V P+RELA Q + + Sbjct 145 VLGAAKTGSGKTLAFLIPAIEMLYSLKFKPRNGTGVIVVSPTRELALQIFGVARDLMAHH 204 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEA 372 ++IGG R + L GV++++ TPGRL D + +T ++ LV+DEA Sbjct 205 SQTL---GIVIGGANRRQEADKLMKGVNLLIATPGRLLDHLQNTKGFIFKNLKALVIDEA 261 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDL 431 D +L G+ D + ++ +P Q ++ SAT + V+ L+ + P ++++ Sbjct 262 DRILEIGFEDEMKQIIKVLP-----SDERQSMLFSAT-QTTKVEDLARISLRAGPLYINV 315 Query 432 KGED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 E S D + V + Sbjct 316 VPETEVSTADGLEQGYVTCDSD-------------------------------------- 337 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 ++ ++ + + I+F + + + LHG + Sbjct 338 --MRFLLLFSFLRRNIKKKIIVFLSSCNCVKYFGELL---------NYIDLPVLDLHGKQ 386 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 K +R F LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R Sbjct 387 KQQKRTNTFFEFCNAKQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARG 446 Query 610 -ERMGLAISLVATEKEKVWYHVCSS 633 G ++ + + ++ ++ Sbjct 447 TGGKGKSLMFLTPSELGFLRYLKAA 471 Score = 110 bits (276), Expect = 4e-24, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 50/93 (54%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++G+ +A+++M + T +Q ++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 107 FEDLGLSEPTMRAIKDMGFEKMTKVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 166 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +Y + G T S + + + Sbjct 167 LYSLKFKPRNG-----TGVIVVSPTRELALQIF 194 >sp|Q6FIL3|HAS1_CANGA ATP-dependent RNA helicase HAS1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=HAS1 PE=3 SV=1 Length=494 Score = 270 bits (690), Expect = 5e-81, Method: Composition-based stats. Identities = 86/424 (20%), Positives = 158/424 (37%), Gaps = 75/424 (18%) Query 228 FPACVLKNAELKF--NFGEEEFKFPPKDGFVAL---------SKAPDGYIVKSQHSGNAQ 276 F + L ++ G + L +K G + Sbjct 31 FKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTIEL 90 Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + KF P N +I+ P+RELA Q +++ ++ ++IGG R + Sbjct 91 LHSLKFKPRNGTGVIIITPTRELALQIFGVVRELMEFHSQT---FGIVIGGANRRQEAEK 147 Query 336 LENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV+++V TPGRL D + +T ++ LV+DEAD +L G+ D + ++ +P Sbjct 148 LMKGVNLLVATPGRLLDHLQNTKGFIFKNLKALVIDEADRILEIGFEDEMRQIIKILP-- 205 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGE--DSVPDTVHHVVVPVNPK 451 + Q ++ SAT + V+ LS + P ++++ E S D + V Sbjct 206 ---NEDRQSMLFSAT-QTTKVEDLSRISLRPGPLFINVVSEHDSSTADGLEQGYVVCESD 261 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + +K ++ + I+ Sbjct 262 K----------------------------------------RFLLLFSFLKRNQKKKIIV 281 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F + + + LHG +K +R F + LIC Sbjct 282 FLSSCNSVKYYAELL---------NYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILIC 332 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATEKEKVWYHV 630 TDVAARG+DI V ++I PD+ ++Y+HR+GR R G ++ + + ++ Sbjct 333 TDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTNGKGKSLMFLIPNELGFLRYL 392 Query 631 CSSR 634 +++ Sbjct 393 KAAK 396 Score = 108 bits (269), Expect = 2e-23, Method: Composition-based stats. Identities = 27/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + +A+E+M + T +QA +IP ++ G DVL AA+TGSGKT AF +P I+ Sbjct 30 SFKSLNLSQPTMRAIEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTIE 89 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +++ + G T + + + + Sbjct 90 LLHSLKFKPRNG-----TGVIIITPTRELALQIF 118 >sp|Q8SQK9|DHH1_ENCCU ATP-dependent RNA helicase DHH1 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=DHH1 PE=3 SV=2 Length=487 Score = 270 bits (689), Expect = 6e-81, Method: Composition-based stats. Identities = 94/427 (22%), Positives = 165/427 (39%), Gaps = 71/427 (17%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 + LGL + +++ ++ A + G + SK G Sbjct 109 ESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLG--------GKNLLVRSKNGTGKTASY 160 Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + ++ + + +I+ P RELA Q N+K+ + + ++GG + Sbjct 161 IVPMLNMINSSEL---SIQGIILVPIRELALQISRNVKRMS---EGTGVISAPVVGGTSM 214 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 +D + + NGV ++VGTPGR+ DLV LS+ LV DEAD LL + + + ++ + Sbjct 215 QDDIIRVSNGVHVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVTKLLD 274 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 +P + Q+++ SAT + V + M P ++L ++ P V V Sbjct 275 LLP------REKQMLLYSATFP-YFVTGFIRRYMKNPLCINLM-KELAPVGVKQFYTYVK 326 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 P + ++Q Sbjct 327 PSEK----------------------------------------LLCLKSLLLRLSINQC 346 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +IFC + + L + G +H +R F KG + L Sbjct 347 VIFCNSIKTVELLAMKITEMG---------LPSYFIHSKMAQEDRNIVFHNFLKGKCKIL 397 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TD+ RG+D YVIN + ++Y+HRIGR GR G+AISLV TE++++ Sbjct 398 VATDLITRGVDAPNTNYVINFDISKSPESYLHRIGRAGRFGAPGVAISLVTTEEKEMLMD 457 Query 630 VCSSRGK 636 + + GK Sbjct 458 IEAKLGK 464 Score = 86.3 bits (212), Expect = 2e-16, Method: Composition-based stats. Identities = 20/127 (16%), Positives = 55/127 (43%), Gaps = 11/127 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + +G+ P + + + ++ + P+ +Q SIP +LGG ++L+ ++ G+GKT ++ +P++ + Sbjct 108 WESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYIVPMLNM 167 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ--SREVKEWHG 121 + + Q + + + + G+ + + Sbjct 168 INSSELSIQ---------GIILVPIRELALQISRNVKRMSEGTGVISAPVVGGTSMQDDI 218 Query 122 CRATKGL 128 R + G+ Sbjct 219 IRVSNGV 225 >sp|Q9BQ39|DDX50_HUMAN ATP-dependent RNA helicase DDX50 OS=Homo sapiens OX=9606 GN=DDX50 PE=1 SV=1 Length=737 Score = 276 bits (706), Expect = 6e-81, Method: Composition-based stats. Identities = 125/546 (23%), Positives = 215/546 (39%), Gaps = 82/546 (15%) Query 155 SLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGL 214 + +D+F K N D Y ++ +D K S N L Sbjct 77 GFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKR------VSSLDTSTHKSSDN----KL 126 Query 215 AFEIPPHMKNQAL--FPAC-----VLKNAELKFNFGEEEFKFPP---KDGFVALSKAPDG 264 + K A FP +LK + + F + F P +A ++ G Sbjct 127 EETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTG 186 Query 265 YIVKSQHSGNAQVTQTKF---LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 ++ + + +PK L++ P+RELA Q + K + KL Sbjct 187 KTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITR-----KLSVA 241 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 GG + + Q++ + NG+DI+VGTPGR+ D + +G+L+LS++R +VLDE D +L G++ Sbjct 242 CFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGFA 301 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGE--DSVP 438 + + + ++ T Q ++ SAT + V K+++K M VDL G+ Sbjct 302 EQVEDIIHE-SYKTDSEDNPQTLLFSATCPQW-VYKVAKKYMKSRYEQVDLVGKMTQKAA 359 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 TV H+ + + WS+ ++ V Sbjct 360 TTVEHLAIQCH-----------------------------------WSQRPAVIGDVLQV 384 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + E +AIIFC TK + + + + CLHGD +R+ L Sbjct 385 YSGSE---GRAIIFCETKKNVTEMA----------MNPHIKQNAQCLHGDIAQSQREITL 431 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 + F++G + L+ T+VAARG+DI V VI + P + ++Y+HR GR GRA R G+ I Sbjct 432 KGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICF 491 Query 619 VATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIK 678 + +V G + M + + + P + Sbjct 492 YQPRERGQLRYVEQKAGITFKRVGVPSTMDLVK-SKSMDAIRSLASVSYAAVDFFRPSAQ 550 Query 679 VPVDEF 684 ++E Sbjct 551 RLIEEK 556 Score = 72.5 bits (176), Expect = 8e-12, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 43/90 (48%), Gaps = 3/90 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AFS + E + ++ IQ ++ + G D++ A TG+GKT +F+IP+I+ Sbjct 138 AFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIE 197 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQ 92 + ++Q+ KK ++ + + Sbjct 198 RLQ---RNQETIKKSRSPKVLVLAPTRELA 224 >sp|O49289|RH29_ARATH Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana OX=3702 GN=RH29 PE=3 SV=1 Length=845 Score = 278 bits (712), Expect = 6e-81, Method: Composition-based stats. Identities = 118/521 (23%), Positives = 198/521 (38%), Gaps = 92/521 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + L L + +K + ++ + + VA+++ G Sbjct 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVD--------VVAMARTGSGKTAA 81 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ Q +ALI+ P+R+LAEQTL K+ K+ D LR L++GG + Sbjct 82 FLIPMLEKLKQHVP-QGGVRALILSPTRDLAEQTLKFTKELGKFTD---LRVSLLVGGDS 137 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 DQ L G D+++ TPGRL L+S + L V ++V DEAD L G+++ ++++ Sbjct 138 MEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQI 197 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 Q+ + Q ++ SATL S + + ++ + P V L E+ + + + Sbjct 198 LTQL------SENRQTLLFSATLPSA-LAEFAKAGLREPQLVRLDVENKISPDLKLSFLT 250 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH--K 505 V P+ K + ++EH Sbjct 251 VRPEE----------------------------------------KYSALLYLVREHISS 270 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 Q +IF TK + + F + P +GD RK ++ RF+ Sbjct 271 DQQTLIFVSTKHHVEFVNSLFKLENIEPSVC---------YGDMDQDARKIHVSRFRARK 321 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 LI TD+AARGIDI + VIN P + +VHR+GR RA R G A S V E Sbjct 322 TMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMP 381 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + K E ++L +EE + T ++ Sbjct 382 YMLDLHLFLSKPVRPA-----------PTEDEVLKNMEEVMTKTSQAID----------S 420 Query 686 GKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSF 726 G YG+ + + EL +LE+ + +F Sbjct 421 GVTVYGRFPQKTIDLIFNRTREMIDSSAELDSLERTSTKAF 461 Score = 98.7 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 0/67 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + A+++ + +PT IQ +++PLIL G DV+ A TGSGKT AF IP+++ Sbjct 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89 Query 64 VYETLKD 70 + + + Sbjct 90 LKQHVPQ 96 >sp|Q4WQM4|HAS1_ASPFU ATP-dependent RNA helicase has1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=has1 PE=3 SV=2 Length=622 Score = 273 bits (698), Expect = 7e-81, Method: Composition-based stats. Identities = 84/429 (20%), Positives = 158/429 (37%), Gaps = 72/429 (17%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 LGL+ + + + ++ + + +K G + Sbjct 145 LGLSEKTLKAINDMGFETMTEIQRRTIPPLLA--------GRDVLGAAKTGSGKTLSFLI 196 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ +F P N ++V P+RELA Q ++ +Y ++IGG R Sbjct 197 PAVEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELCQYHSQTY---GIVIGGANRR 253 Query 331 DQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 + L GV++++ TPGRL D + +T ++ LV+DEAD +L G+ D + ++ Sbjct 254 AEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNLKTLVIDEADRILEVGFEDEMRQIVK 313 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLK--GEDSVPDTVHHVVV 446 +P + Q ++ SAT + V+ L+ + P ++++ E S + + V Sbjct 314 ILP-----SEERQTMLFSAT-QTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYV 367 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + +K + Sbjct 368 ICEADK----------------------------------------RFLLLFSFLKRNLK 387 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I+F + + + LHG +K +R F Sbjct 388 KKIIVFFSSCNCVKYHAELL---------NYIDLPVLELHGKQKQQKRTNTFFEFCNAKQ 438 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA-ERMGLAISLVATEKEK 625 LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R G ++ + + Sbjct 439 GTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTNAKGRSLMFLQPSEVG 498 Query 626 VWYHVCSSR 634 H+ +R Sbjct 499 FLKHLKEAR 507 Score = 106 bits (265), Expect = 1e-22, Method: Composition-based stats. Identities = 29/93 (31%), Positives = 50/93 (54%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G+ + +A+ +M + T+IQ +IP +L G DVL AA+TGSGKT +F IP +++ Sbjct 142 FTELGLSEKTLKAINDMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEM 201 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + G T S + + + Sbjct 202 LSALRFKPRNG-----TGVIVVSPTRELALQIF 229 >sp|Q756G5|DBP8_EREGS ATP-dependent RNA helicase DBP8 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP8 PE=3 SV=1 Length=435 Score = 267 bits (683), Expect = 8e-81, Method: Composition-based stats. Identities = 103/465 (22%), Positives = 175/465 (38%), Gaps = 75/465 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 KDLG+A + + + + ++ A + + + +K G Sbjct 6 STFKDLGVAKWLAEALNSMKITQPTTIQKACIP--------EILAGRDCIGGAKTGSGKT 57 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + +T+ P +++ P+RELA Q +QF +R L++GG Sbjct 58 IAFAA---PMLTKWSADPCGMFGIVLTPTRELAMQI---AEQFTALGSVMNIRVALVVGG 111 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSD 382 Q L+ ++ TPGRL + + L +VR+LVLDEAD LL+ +SD Sbjct 112 EDIVSQALELQRKPHFIIATPGRLAHHIMHSGEDTIGGLKRVRYLVLDEADILLTDTFSD 171 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSF-----DVKKLSEKIMHFPTWVDLKGEDSV 437 + +P ++ Q ++ +AT+ D S K F V+ + +V Sbjct 172 ALATCVQILP----PKEKRQNLLFTATMTDQVLALKDAPPTSGKPPLFSFHVENLDDLAV 227 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 P ++ + V + Y Sbjct 228 PASLQTTYLLVPEHVKEAY--------------------------------------LYQ 249 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 V + +E+K AI+F I + L + +Q + LH ER + Sbjct 250 VLSSEEYKSKSAIVFVNRTISAEILRRMLMQL---------EIRVTSLHSQMPQRERTNS 300 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 L+RF+ R LI TDVA+RG+DI V V+N +P Y+HR GR RA R G A+S Sbjct 301 LQRFRANAARVLIATDVASRGLDIPAVQLVVNYDIPANPDTYIHRAGRTARAGRGGEALS 360 Query 618 LVATEKEKVWYHVCSSRGKGCYN-TRLKEDGGCTIWYNEMQLLSE 661 +A + + GK T++ + N++ + Sbjct 361 FIAPKDVSRIQAIEERIGKKMDEFTKVGDTALIRKSLNKVTVAKR 405 Score = 102 bits (255), Expect = 6e-22, Method: Composition-based stats. Identities = 43/174 (25%), Positives = 70/174 (40%), Gaps = 20/174 (11%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F ++GV +A+A+ M PT IQ IP IL G D + A+TGSGKT AF+ P++ Sbjct 6 STFKDLGVAKWLAEALNSMKITQPTTIQKACIPEILAGRDCIGGAKTGSGKTIAFAAPML 65 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLCC 111 + + M ++ +A +G + + Sbjct 66 TKW---------SADPCGMFGIVLTPTRELAMQIAEQFTALGSVMNIRVALVVGGEDIVS 116 Query 112 QSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFG 164 Q+ E++ H AT G + + GL RV + + + L TD F Sbjct 117 QALELQRKPHFIIATPGRLAHHIMHSGEDTIGGLKRVRYLVLDEADILLTDTFS 170 >sp|Q2UUN6|HAS1_ASPOR ATP-dependent RNA helicase has1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=has1 PE=3 SV=2 Length=596 Score = 272 bits (696), Expect = 8e-81, Method: Composition-based stats. Identities = 95/446 (21%), Positives = 165/446 (37%), Gaps = 77/446 (17%) Query 208 NGKDLGLA--FEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVAL----- 258 NG+DL A +P + F L +K G E + L Sbjct 99 NGEDLPSADTIRLPQQDGDPVKFTELGLSEKTMKGIEGMGFETMTEVQRRTIPPLLAGRD 158 Query 259 ----SKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYI 313 +K G + ++ +F P N A+IV P+RELA Q +++ + Sbjct 159 VLGAAKTGSGKTLSFLIPAIEMLSALRFKPRNGTGAIIVSPTRELALQIFGQVRELLAHH 218 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEA 372 ++IGG R + L GV+++V TPGRL D + +T +R L++DEA Sbjct 219 SQTY---GIVIGGANRRAEAEKLMKGVNLLVATPGRLLDHLQNTQGFVFKNLRTLIIDEA 275 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDL 431 D +L G+ D + ++ +P + Q ++ SAT + V+ L+ + P ++++ Sbjct 276 DRILEVGFEDEMRQIAKILP-----SENRQTMLFSAT-QTTKVEDLARISLRPGPLYINV 329 Query 432 K--GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 E S + + V Sbjct 330 DHRKEHSTVEGLEQGYVICEADK------------------------------------- 352 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 + +K + + I+F + + + LHG + Sbjct 353 ---RFLLLFSFLKRNLKKKIIVFLSSCNSVKYYGELL---------NYIDLPVLDLHGKQ 400 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 K +R F LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R Sbjct 401 KQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARG 460 Query 610 ER-MGLAISLVATEKEKVWYHVCSSR 634 G ++ + + H+ +R Sbjct 461 SNGKGRSLMFLQPSEVGFLKHLKEAR 486 Score = 106 bits (265), Expect = 1e-22, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 50/99 (51%), Gaps = 5/99 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+G+ + + +E M + T++Q +IP +L G DVL AA+TGSGKT +F IP I++ Sbjct 121 FTELGLSEKTMKGIEGMGFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEM 180 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + + G T S + + + + Sbjct 181 LSALRFKPRNG-----TGAIIVSPTRELALQIFGQVREL 214 >sp|Q8Y755|CSHB_LISMO DEAD-box ATP-dependent RNA helicase CshB OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=cshB PE=2 SV=1 Length=435 Score = 267 bits (683), Expect = 8e-81, Method: Composition-based stats. Identities = 107/481 (22%), Positives = 184/481 (38%), Gaps = 68/481 (14%) Query 217 EIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-- 274 P L +L G E + + K +G Sbjct 2 TKKSRFDQFGFQPFIGLAIDKL----GFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTH 57 Query 275 ----AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + +A +A+I PSRELA Q N I++ KY ++ L+IGG + Sbjct 58 TFILPIINNVNPEKDAVQAVITAPSRELATQIYNEIRKVTKY-SEKEIAVQLVIGGTDKQ 116 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 + L+ I+VGTPGR++DL+ L + + LV+DEAD L G+ + ++ + + Sbjct 117 RAIDKLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADMTLDMGFLNDVDHIAGK 176 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 +P LQ++V SAT+ +K K M P + ++ + + TV H ++ Sbjct 177 MPA------NLQMLVFSATIP-QKLKPFLSKYMENPRYEHIQPKVAASKTVEHRIMATRS 229 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 + K + + + AI Sbjct 230 RN----------------------------------------KLDLLKNVLVGSQPYLAI 249 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 +F TK D + I++G +HGD P ERK+ +++ + D ++++ Sbjct 250 VFTNTKTTADEVANGLIERG---------LKVAKIHGDVNPRERKRTMKQIENLDYQYVV 300 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 TD+AARGIDI G+ +V+N LPD+ Y+HR GR GRA G+A++L E + Sbjct 301 ATDLAARGIDIQGISHVVNYELPDDLDFYIHRTGRTGRAGHSGIALTLFEPADEDRLNQL 360 Query 631 CSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD-EFDGKVT 689 + + ++ N E + + K + K+ Sbjct 361 EKMGIEFKHVDWKNKEFVTLEDRNRRAKREAKRETADPREIGMRKKAKQKGKPNYKKKIN 420 Query 690 Y 690 Y Sbjct 421 Y 421 Score = 90.6 bits (223), Expect = 6e-18, Method: Composition-based stats. Identities = 64/375 (17%), Positives = 131/375 (35%), Gaps = 69/375 (18%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F + G P I A++++ + PT++Q + IP IL G ++ ++TG+GKT F +P+I Sbjct 5 SRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGESIIGQSQTGTGKTHTFILPII 64 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 V + + + Y+ S+ + G Sbjct 65 NNV---------NPEKDAVQAVITAPSRELATQIYNEIRKVTKYSEK---EIAVQLVIGG 112 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 + + K K ++ G R+ + +L + T K Sbjct 113 TDKQRAIDKLKKQPQIIVGTPG--RINDLIREQALFVHTAKTLV---------------- 154 Query 182 YGEEFTMHDT---IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAEL 238 D +G D+D K N + L + IP +K L Sbjct 155 ----IDEADMTLDMGFLNDVDHIAGKMPANLQMLVFSATIPQKLK------------PFL 198 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK-ALIVEPSRE 297 ++ VA SK + I+ ++ + + + + P A++ ++ Sbjct 199 SKYMENPRYEHIQPK--VAASKTVEHRIMATRSRNKLDLLKNVLVGSQPYLAIVFTNTKT 256 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI----VVGTPGRLDDL 353 A++ N + + L+ I G V R++ ++ ++ VV T DL Sbjct 257 TADEVANGLIE-------RGLKVAKIHGDVNPRERKRTMKQIENLDYQYVVAT-----DL 304 Query 354 VSTGKLNLSQVRFLV 368 + G +++ + +V Sbjct 305 AARG-IDIQGISHVV 318 >sp|A2Q9T6|HAS1_ASPNC ATP-dependent RNA helicase has1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=has1 PE=3 SV=1 Length=606 Score = 273 bits (697), Expect = 9e-81, Method: Composition-based stats. Identities = 97/457 (21%), Positives = 165/457 (36%), Gaps = 77/457 (17%) Query 197 DIDKGHVKFSKNGKDLGL--AFEIPPHMKNQALFPACVLKNAELK--FNFGEEEFKFPPK 252 D D K NG DL A +P F L +K + G E + Sbjct 94 DEDDNEGKEDGNGADLPSLDAVRLPQTDGEPKKFTELNLSEKTMKGIQDMGFETMTEIQQ 153 Query 253 DGFVAL---------SKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQT 302 L +K G + ++ +F P N L+V P+RELA Q Sbjct 154 RTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALRFKPRNGTGVLVVSPTRELALQI 213 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNL 361 ++ + ++IGG R + L GV++++ TPGRL D + +T Sbjct 214 FGVARELMAHHSQTY---GIVIGGANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVF 270 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 ++ LV+DEAD +L G+ D + ++ +P + Q ++ SAT + V+ L+ Sbjct 271 KNLKTLVIDEADRILEVGFEDEMRQIVKILP-----SEERQTMLFSAT-QTTKVEDLARI 324 Query 422 IMH-FPTWVDLK--GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 + P ++++ E S + + V Sbjct 325 SLRPGPLYINVDHRKEHSTVEGLEQGYVICEADK-------------------------- 358 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 + +K + + I+F + + Sbjct 359 --------------RFLLLFSFLKRNLKKKIIVFFSSCNCVKYHAELL---------NYI 395 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + LHG +K +R F LICTDVAARG+DI V ++I PD+ ++ Sbjct 396 DLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGLDIPAVDWIIQFDPPDDTRD 455 Query 599 YVHRIGRVGRA-ERMGLAISLVATEKEKVWYHVCSSR 634 YVHR+GR R G ++ + + H+ +R Sbjct 456 YVHRVGRTARGVNGKGRSLMFLQPSEVGFLKHLKEAR 492 Score = 104 bits (260), Expect = 5e-22, Method: Composition-based stats. Identities = 27/95 (28%), Positives = 49/95 (52%), Gaps = 5/95 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+E+ + + + +++M + T+IQ +IP +L G DVL AA+TGSGKT +F IP + Sbjct 125 KKFTELNLSEKTMKGIQDMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAV 184 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +++ + G T S + + + Sbjct 185 EMLSALRFKPRNG-----TGVLVVSPTRELALQIF 214 >sp|Q2GMX1|HAS1_CHAGB ATP-dependent RNA helicase HAS1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=HAS1 PE=3 SV=1 Length=586 Score = 272 bits (695), Expect = 9e-81, Method: Composition-based stats. Identities = 84/433 (19%), Positives = 159/433 (37%), Gaps = 76/433 (18%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL------------SKAPDGYI 266 P + F L + + + E F + + +K G Sbjct 105 PSVSTDAQAFSELNLSDKTM-MSINEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKT 163 Query 267 VKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + + +F P N ++V P+RELA Q ++ K ++IG Sbjct 164 LAFLIPAIEMLNSLRFKPRNGTGVIVVTPTRELALQIFGVARELMKNHSQTY---GVVIG 220 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G R + L GV++++ TPGRL D + G ++ L++DEAD +L G+ D + Sbjct 221 GANIRAEEDKLGKGVNLLIATPGRLLDHLRRGSFVFKNLKSLIIDEADRILEVGFEDEMR 280 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGED--SVPDTVH 442 + +P+ + Q ++ SAT + V+ L+ + P ++++ E S + + Sbjct 281 HIVKILPK-----ENRQTMLFSAT-QTTKVEDLARISLRPGPLYINVDEEKQFSTVEGLD 334 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V V+ + +K Sbjct 335 QGYVIVDADK----------------------------------------RFLLLFSFLK 354 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + + I+F + + + + LHG +K +R F Sbjct 355 KMAKKKIIVFLSSCNSVKYYSELL---------QYIDLQVLDLHGKQKQQKRTNTFFEFC 405 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVAT 621 LICTDVAARG+DI V +++ PD+ ++Y+HR+GR R G ++ + Sbjct 406 NAKQGTLICTDVAARGLDIPQVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLLFLQP 465 Query 622 EKEKVWYHVCSSR 634 + H+ +++ Sbjct 466 CELGFLAHLKAAK 478 Score = 105 bits (261), Expect = 3e-22, Method: Composition-based stats. Identities = 31/94 (33%), Positives = 48/94 (51%), Gaps = 5/94 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AFSE+ + + ++ EM + T+IQ IP +L G DVL AA+TGSGKT AF IP I+ Sbjct 113 AFSELNLSDKTMMSINEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIE 172 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 ++ + G T + + + + Sbjct 173 MLNSLRFKPRNG-----TGVIVVTPTRELALQIF 201 >sp|Q5AJD0|DBP5_CANAL ATP-dependent RNA helicase DBP5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP5 PE=3 SV=2 Length=540 Score = 270 bits (691), Expect = 9e-81, Method: Composition-based stats. Identities = 101/463 (22%), Positives = 186/463 (40%), Gaps = 82/463 (18%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ ++LGL+ E+ + ++ L + S++ G Sbjct 150 KSFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPP------RNMIGQSQSGTGKT 203 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + +++ P+ L + P+RELA QTL I K+ + + L++ Sbjct 204 AAFSLT---MLSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTN---ITTQLVVPN 257 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFIN 385 R ++VGTPG DL+ +LNLS+++ VLDEAD +L QG D Sbjct 258 AIPRGS----SVNAQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAI 313 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 R+ +P + +Q+++ SAT + +V++ +E+++ ++LK E+ D + + Sbjct 314 RVKKALP------RGVQLVLFSATFPT-EVREYAERLVPDANSLELKQEELNVDGIKQLY 366 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + + ++L Y + I Sbjct 367 MDCRSEQHKF----------------------------------EVLCELYGLLTI---- 388 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 +IIF K D L ++G + LHG +R + ++ F++G Sbjct 389 -GSSIIFVEKKETADVLYGKMKKEG---------HTVSVLHGGLDNTDRDRLIDDFREGR 438 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHRIGRVGRAERMGLAISLV 619 + LI T+V ARGIDI V V+N +P + Y+HRIGR GR R+G++IS + Sbjct 439 SKVLITTNVLARGIDIASVSMVVNYDMPTDKYGKPDPSTYLHRIGRTGRFGRVGVSISFI 498 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 + + TR+ D W +++ ++ Sbjct 499 HDRRSYDILMAIKAYFGNVEMTRVPTD----DWDEVEKIVKKV 537 Score = 94.4 bits (233), Expect = 7e-19, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 53/109 (49%), Gaps = 11/109 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ PE+ + + M + P+ IQ +++PL+L +++ +++G+GKT AFS+ Sbjct 149 VKSFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSL 208 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 ++ V T+K Q S + + + ++ Sbjct 209 TMLSRVDPTIKMPQ---------CLCLSPTRELARQTLEVITTMGKFTN 248 >sp|P38719|DBP8_YEAST ATP-dependent RNA helicase DBP8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP8 PE=1 SV=1 Length=431 Score = 267 bits (682), Expect = 1e-80, Method: Composition-based stats. Identities = 104/491 (21%), Positives = 179/491 (36%), Gaps = 79/491 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 K LGL+ + ++ + ++ A + K + +K G + Sbjct 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIP--------KILEGRDCIGGAKTGSGKTIA 55 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 +T+ P+ +++ P+RELA Q +QF + +R +I+GG + Sbjct 56 F---AGPMLTKWSEDPSGMFGVVLTPTRELAMQI---AEQFTALGSSMNIRVSVIVGGES 109 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFI 384 Q L+ ++ TPGRL + + + L + ++LVLDEAD LL+ ++D + Sbjct 110 IVQQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHL 169 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH------FPTWVDLKGEDSVP 438 + +P + Q ++ +AT+ VK L + F V+ ++P Sbjct 170 ATCISALP----PKDKRQTLLFTATITDQ-VKSLQNAPVQKGKPPLFAYQVESVDNVAIP 224 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 T+ + V + Y + Sbjct 225 STLKIEYILVPEHVKEAY--------------------------------------LYQL 246 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 +E++ AIIF + + L + Q + LH ER +L Sbjct 247 LTCEEYENKTAIIFVNRTMTAEILRRTLKQL---------EVRVASLHSQMPQQERTNSL 297 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 RF+ R LI TDVA+RG+DI V V+N +P + ++HR GR RA R+G AIS Sbjct 298 HRFRANAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISF 357 Query 619 VATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ--VEPD 676 V + K T K I ++ E L + E Sbjct 358 VTQRDVSRIQAIEDRINKKMTETN-KVHDTAVIRKALTKVTKAKRESLMAMQKENFGERK 416 Query 677 IKVPVDEFDGK 687 + + DGK Sbjct 417 RQQKKKQNDGK 427 Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats. Identities = 37/157 (24%), Positives = 61/157 (39%), Gaps = 20/157 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MA F +G+ + +++ M PT IQ IP IL G D + A+TGSGKT AF+ P+ Sbjct 1 MADFKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPM 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLC 110 + E + + M ++ +A +G + + Sbjct 61 LTKWSE---------DPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIV 111 Query 111 CQSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCR 146 Q+ +++ H AT G + GL R Sbjct 112 QQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMR 148 >sp|A6ZT77|DBP8_YEAS7 ATP-dependent RNA helicase DBP8 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP8 PE=3 SV=1 Length=431 Score = 267 bits (682), Expect = 1e-80, Method: Composition-based stats. Identities = 104/491 (21%), Positives = 179/491 (36%), Gaps = 79/491 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 K LGL+ + ++ + ++ A + K + +K G + Sbjct 4 FKSLGLSKWLTESLRAMKITQPTAIQKACIP--------KILEGRDCIGGAKTGSGKTIA 55 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 +T+ P+ +++ P+RELA Q +QF + +R +I+GG + Sbjct 56 F---AGPMLTKWSEDPSGMFGVVLTPTRELAMQI---AEQFTALGSSMNIRVSVIVGGES 109 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFI 384 Q L+ ++ TPGRL + + + L + ++LVLDEAD LL+ ++D + Sbjct 110 IVQQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHL 169 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH------FPTWVDLKGEDSVP 438 + +P + Q ++ +AT+ VK L + F V+ ++P Sbjct 170 ATCISALP----PKDKRQTLLFTATITDQ-VKSLQNAPVQKGKPPLFAYQVESVDNVAIP 224 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 T+ + V + Y + Sbjct 225 STLKIEYILVPEHVKEAY--------------------------------------LYQL 246 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 +E++ AIIF + + L + Q + LH ER +L Sbjct 247 LTCEEYENKTAIIFVNRTMTAEILRRTLKQL---------EVRVASLHSQMPQQERTNSL 297 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 RF+ R LI TDVA+RG+DI V V+N +P + ++HR GR RA R+G AIS Sbjct 298 HRFRANAARILIATDVASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISF 357 Query 619 VATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ--VEPD 676 V + K T K I ++ E L + E Sbjct 358 VTQRDVSRIQAIEDRINKKMTETN-KVHDTAVIRKALTKVTKAKRESLMAMQKENFGERK 416 Query 677 IKVPVDEFDGK 687 + + DGK Sbjct 417 RQQKKKQNDGK 427 Score = 101 bits (251), Expect = 2e-21, Method: Composition-based stats. Identities = 37/157 (24%), Positives = 61/157 (39%), Gaps = 20/157 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MA F +G+ + +++ M PT IQ IP IL G D + A+TGSGKT AF+ P+ Sbjct 1 MADFKSLGLSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPM 60 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLC 110 + E + + M ++ +A +G + + Sbjct 61 LTKWSE---------DPSGMFGVVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIV 111 Query 111 CQSREVKEW-HGCRATKGLMKGKHYYEVSCHDQGLCR 146 Q+ +++ H AT G + GL R Sbjct 112 QQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMR 148 >sp|Q7S2N9|HAS1_NEUCR ATP-dependent RNA helicase has-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=has-1 PE=3 SV=1 Length=578 Score = 271 bits (693), Expect = 1e-80, Method: Composition-based stats. Identities = 83/428 (19%), Positives = 160/428 (37%), Gaps = 71/428 (17%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L L+ + + ++ + + +K G + Sbjct 112 LNLSDKTMKAIAEMGFTKMTEIQRRGIPPLLA--------GKDVLGAAKTGSGKTLAFLI 163 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ +F P N A++V P+RELA Q ++ K ++IGG R Sbjct 164 PAIEMLSSLRFKPRNGTGAIVVTPTRELALQIFGVARELMKNHSQTY---GVVIGGANRR 220 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 + L GV++++ TPGRL D + +R L++DEAD +L G+ D + ++ Sbjct 221 AEAEKLGKGVNLLIATPGRLLDHLQNTPFVFKNMRSLIIDEADRILEIGFEDEMRQIIKI 280 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGED--SVPDTVHHVVVP 447 +P+ + Q ++ SAT + V+ L+ + P +V++ E S + + V Sbjct 281 LPK-----EDRQTMLFSAT-QTTKVEDLARISLRPGPLYVNVDEEKQFSTVEGLDQGYVV 334 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V+ + +K+ + Sbjct 335 VDADK----------------------------------------RFLLLFSFLKKMQKK 354 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 + I+F + + + + LHG +K +R F Sbjct 355 KVIVFFSSCNSVKYYSELL---------QYIDLQVLDLHGKQKQQKRTNTFFEFCNAKQG 405 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATEKEKV 626 LICTDVAARG+DI V +++ PD+ ++Y+HR+GR R G ++ + + Sbjct 406 TLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHRVGRTARGNNTKGRSLLFLQPNELGF 465 Query 627 WYHVCSSR 634 H+ +++ Sbjct 466 LAHLKAAK 473 Score = 107 bits (267), Expect = 6e-23, Method: Composition-based stats. Identities = 31/95 (33%), Positives = 48/95 (51%), Gaps = 5/95 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FSE+ + + +A+ EM + T+IQ IP +L G DVL AA+TGSGKT AF IP I Sbjct 107 TDFSELNLSDKTMKAIAEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAI 166 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +++ + G T + + + + Sbjct 167 EMLSSLRFKPRNG-----TGAIVVTPTRELALQIF 196 >sp|A3LP87|DBP8_PICST ATP-dependent RNA helicase DBP8 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP8 PE=3 SV=2 Length=445 Score = 267 bits (682), Expect = 1e-80, Method: Composition-based stats. Identities = 102/480 (21%), Positives = 175/480 (36%), Gaps = 79/480 (16%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGY---------IVKSQHSGNAQVTQTKFLPNAPK 288 L + P + K G+ K+ +TQ P Sbjct 12 LSEALAAMKIHTPTAIQSGCIPKILSGHDCIGGAKTGSGKTIAFAAPMLTQWSEDPFGIF 71 Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 L++ P+RELA Q +QF + ++ +++GG Q L+ V+ TPG Sbjct 72 GLVLTPTRELALQI---AEQFAALGASMNIKISVVVGGEDFVKQTLELQKKPHFVIATPG 128 Query 349 RLDDLV----STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 RL D + L ++++LVLDEAD LLS + + R + +P ++ Q Sbjct 129 RLADHILNSGEETISGLRRIKYLVLDEADRLLSNSFGGDLERCFSVLP----PSEKRQTC 184 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + +AT+ V+ L EK GK + Sbjct 185 LFTATVTDA-VRALKEK----------------------------------PPAQGKPPV 209 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ--AIIFCRTKIDCDNL 522 +V D + + +K Y ++ + ++ A+IF + L Sbjct 210 FLHEVETVDQVAIPSTLSIKYVFVPSYVKEAYLNSILRLPQYEKSTAVIFVNRTTTAEVL 269 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + + +F LH + ER +++RFK G R LI TDVA+RG+DI Sbjct 270 RRTLRKL---------EFRVASLHSEMPQSERTNSVQRFKAGAARILIATDVASRGLDIP 320 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V V+N +P + +++HR+GR RA R G A++++A + + K Sbjct 321 SVELVVNFDIPADPDDFIHRVGRTARAGRSGDAVTIIAEKDIDRIASIEERINKKMEL-- 378 Query 643 LKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE-FDGKVTYGQKRAAGGGSY 701 L+E ++ I + L T + E F K +K+ Sbjct 379 LEEVTDDSV----------ITDSLTATSVAKRESLMEMDKENFGEKRKINRKKRGLETEK 428 Score = 101 bits (252), Expect = 2e-21, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 20/156 (13%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F ++GV +++A+ M PT IQ+ IP IL G D + A+TGSGKT AF+ P++ Sbjct 2 SFEDLGVSRWLSEALAAMKIHTPTAIQSGCIPKILSGHDCIGGAKTGSGKTIAFAAPMLT 61 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLCCQ 112 E + + + ++ +A +G + Q Sbjct 62 QWSE---------DPFGIFGLVLTPTRELALQIAEQFAALGASMNIKISVVVGGEDFVKQ 112 Query 113 SREV-KEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 + E+ K+ H AT G + GL R+ Sbjct 113 TLELQKKPHFVIATPGRLADHILNSGEETISGLRRI 148 >sp|Q4P7Z8|DBP5_USTMA ATP-dependent RNA helicase DBP5 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP5 PE=3 SV=1 Length=456 Score = 267 bits (683), Expect = 2e-80, Method: Composition-based stats. Identities = 97/471 (21%), Positives = 182/471 (39%), Gaps = 79/471 (17%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + +K+ + LGL + + ++ L + Sbjct 56 PNSPLYSAKSFEALGLHENLLKGIYAMKYQKPSKIQEKALPLLLQNPP------KNMIGQ 109 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S++ G + +++ + P+A+ + PSRELA Q ++ + K+ + + Sbjct 110 SQSGTGKTAAFILT---MLSRIDYDLQKPQAIALAPSRELARQIMDVARTMSKFTN---V 163 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 L + R + + +++GTPG+ D++ + ++ + ++ VLDEAD +L Q Sbjct 164 TTCLCLPDEVKRGE----KITAQLIIGTPGKTFDMIKSKGIDTAAIKVFVLDEADNMLDQ 219 Query 379 -GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 + R+ N +P K Q+++ SAT + +V + +I + LK E+ Sbjct 220 QSLGEQSIRVKNTMP------KSCQLVLFSATFPT-NVYDFAVRIAPGANEIRLKQEELS 272 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + + + + K E Sbjct 273 VEGIKQFYMDCKDEDH---------------------------------------KYEVL 293 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 V + Q+IIFC + D + Q Q+G LHG + +R + Sbjct 294 VELYNLLTIGQSIIFCAKRETADRIAQKMTQEG---------HKVDSLHGRLETADRDRT 344 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAER 611 ++ F+ G + LI T+V ARGIDI V VIN +P + + Y+HRIGR GR R Sbjct 345 IDAFRDGKSKVLISTNVIARGIDIQQVTLVINYDMPLTQTGEADAETYLHRIGRTGRFGR 404 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 G++I+ V ++ + K C TR+ + + Y + L +I Sbjct 405 KGVSINFVHDQQSWSYMDQIEKALK-CQITRVATNDLEEMEYTIKEALKQI 454 Score = 89.0 bits (219), Expect = 2e-17, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 13/127 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIP 59 +F +G+ + + + M + P+ IQ +++PL+L +++ +++G+GKT AF + Sbjct 64 KSFEALGLHENLLKGIYAMKYQKPSKIQEKALPLLLQNPPKNMIGQSQSGTGKTAAFILT 123 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI--GSDGLCCQSREVK 117 ++ + L+ Q + + D + C EVK Sbjct 124 MLSRIDYDLQKPQ---------AIALAPSRELARQIMDVARTMSKFTNVTTCLCLPDEVK 174 Query 118 EWHGCRA 124 A Sbjct 175 RGEKITA 181 >sp|Q5T1V6|DDX59_HUMAN Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens OX=9606 GN=DDX59 PE=1 SV=1 Length=619 Score = 272 bits (695), Expect = 2e-80, Method: Composition-based stats. Identities = 99/456 (22%), Positives = 191/456 (42%), Gaps = 70/456 (15%) Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEE 245 + H I L++ + ++ K + LG+ + + F C L L N + Sbjct 168 YKEHPFI---LNLQEDQIENLK--QQLGILVQGQEVTRPIIDFEHCSLPE-VLNHNLKKS 221 Query 246 EFKFPPKDGFVALSKAPDG-YIVKSQHSGNAQ--------VTQTKFLPNAPKALIVEPSR 296 ++ P + G I+ S +G+ + + + F P ALI+ P+R Sbjct 222 GYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTR 281 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 ELA Q K+ + P+++ +L++GG+ QL L+ V +++ TPGRL D++ Sbjct 282 ELAIQIERQAKELMSGL--PRMKTVLLVGGLPLPPQLYRLQQHVKVIIATPGRLLDIIKQ 339 Query 357 GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVK 416 + L V+ +V+DEAD +L G+ + + IP Q I+ SAT+ + ++ Sbjct 340 SSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPN------DCQTILVSATIPT-SIE 392 Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L+ +++H P + ++ V +++ V Sbjct 393 QLASQLLHNPVRIITGEKNLPCANVRQIILWVE--------------------------- 425 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 P + +IL + + ++F K+ D L + +K Sbjct 426 ----DPAKKKKLFEILNDKKLFK-------PPVLVFVDCKLGADLLSE--------AVQK 466 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 + +H ++ ERK L+ +GD ++ T V RG+D+ V V+N +P Sbjct 467 ITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNFDMPSSM 526 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 YVH+IGRVGR + G AI+ + +++++ + Sbjct 527 DEYVHQIGRVGRLGQNGTAITFINNNSKRLFWDIAK 562 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 26/106 (25%), Positives = 44/106 (42%), Gaps = 9/106 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + +++ + +PT IQ + IP+ L G D+L +A+TGSGKT AF +PVI Sbjct 205 FEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMR 264 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 K T + + + + G + Sbjct 265 ALFESK---------TPSALILTPTRELAIQIERQAKELMSGLPRM 301 >sp|Q09916|HAS1_SCHPO ATP-dependent RNA helicase has1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=has1 PE=1 SV=1 Length=578 Score = 270 bits (691), Expect = 3e-80, Method: Composition-based stats. Identities = 88/445 (20%), Positives = 167/445 (38%), Gaps = 72/445 (16%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 ++++ + DL L+ I +K ++ + Sbjct 78 VNLNASSTSDIEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLA--------GRDV 129 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 + +K G + + KF P N +I+ P+RELA Q K+ KY Sbjct 130 LGAAKTGSGKTLAFLIPTIEMLYALKFKPRNGTGVIIISPTRELALQIFGVAKELLKYHH 189 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEAD 373 ++IGG R + L GV+++V TPGRL D + +T +R LV+DEAD Sbjct 190 QT---FGIVIGGANRRAEADKLVKGVNLLVATPGRLLDHLQNTKGFVFRNLRSLVIDEAD 246 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLK 432 +L G+ D + ++ +P + Q ++ SAT + V+ L+ + P +V++ Sbjct 247 RILEIGFEDEMRQIMKILP-----SENRQTLLFSAT-QTTKVEDLARISLKPGPLYVNVD 300 Query 433 G--EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 S + + V V+ Sbjct 301 SGKPTSTVEGLEQGYVVVDSDK-------------------------------------- 322 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 + +K + + I+F + + + + LHG +K Sbjct 323 --RFLLLFSFLKRNLKKKVIVFMSSCASVKYMAELL---------NYIDLPVLDLHGKQK 371 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 R F + L+CT+VAARG+DI V +++ PD+ ++Y+HR+GR R Sbjct 372 QQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDYIHRVGRTARGT 431 Query 611 R-MGLAISLVATEKEKVWYHVCSSR 634 + G ++ +A + ++ +++ Sbjct 432 KGTGKSLMFLAPSELGFLRYLKTAK 456 Score = 109 bits (273), Expect = 1e-23, Method: Composition-based stats. Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 5/96 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS++ + I +A++EM + T+IQ SIP +L G DVL AA+TGSGKT AF IP Sbjct 88 IEKFSDLQLSENIQKAIKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPT 147 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 I+++Y + G T S + + + Sbjct 148 IEMLYALKFKPRNG-----TGVIIISPTRELALQIF 178 >sp|Q6BH93|HAS1_DEBHA ATP-dependent RNA helicase HAS1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=HAS1 PE=3 SV=1 Length=568 Score = 270 bits (689), Expect = 4e-80, Method: Composition-based stats. Identities = 83/435 (19%), Positives = 160/435 (37%), Gaps = 74/435 (17%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 + N ++ GL+ +K+ ++ + + +K G Sbjct 103 TDNFEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLA--------GRDVLGAAKTGSGK 154 Query 266 IVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + +F P N ++V P+RELA Q ++ + ++I Sbjct 155 TLAFLIPAIEMLYSLRFKPRNGTGVVVVSPTRELALQIFGVARELMAHHSQT---FGIVI 211 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG R + L GV++++ TPGRL D + +T V+ LV+DEAD +L G+ + Sbjct 212 GGANRRQEAEKLMKGVNLLIATPGRLLDHLQNTQGFVFKNVKALVIDEADRILEIGFEEE 271 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDL--KGEDSVPDT 440 + ++ +P + Q ++ SAT + V+ L+ + P ++++ + E S Sbjct 272 MKQIIKILP-----NEDRQSMLFSAT-QTTKVEDLARISLRPGPLYINVASESEASTVAG 325 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + V + Sbjct 326 LEQGYVVCESDK----------------------------------------RFLLLFSF 345 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 +K + + I+F + + + LHG +K +R Sbjct 346 LKRNVKKKIIVFLSSCNCVKYFGELL---------NYIDLPVLDLHGKQKQQKRTNTFFE 396 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR--AERMGLAISL 618 F LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R A G ++ Sbjct 397 FCNATQGILICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTAG-KGKSLMF 455 Query 619 VATEKEKVWYHVCSS 633 + + ++ ++ Sbjct 456 LTPSELGFLRYLKAA 470 Score = 108 bits (270), Expect = 2e-23, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 50/93 (54%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E G+ +A+++M + T +QA++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 106 FEEAGLSEPTLKAIKDMGFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 165 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +Y + G T S + + + Sbjct 166 LYSLRFKPRNG-----TGVVVVSPTRELALQIF 193 >sp|Q6CJU1|DBP5_KLULA ATP-dependent RNA helicase DBP5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP5 PE=3 SV=1 Length=469 Score = 266 bits (681), Expect = 4e-80, Method: Composition-based stats. Identities = 105/431 (24%), Positives = 174/431 (40%), Gaps = 76/431 (18%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQVTQTKFLPNAPKALIVEPSR 296 ++ K K + + P I +SQ +T+ N+ +A+ + P+R Sbjct 100 QKPSKIQEKALPLLIRDPPHNMIAQSQSGTGKTAAFSLTMLTRVDPNVNSTQAICLSPAR 159 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 ELA QTL I++ K+ L++ R++ +IVVGTPG + DL+ Sbjct 160 ELARQTLEVIQEMGKFTKTS---SQLVVPDSFERNK----PITANIVVGTPGTVLDLIRR 212 Query 357 GKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV 415 LNL ++ VLDEAD +L QG D R+ +P K Q+++ SAT V Sbjct 213 KMLNLGSIKVFVLDEADNMLDKQGLGDQCIRVKKFLP------KTCQLVLFSATF-DDGV 265 Query 416 KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNT 475 ++ ++KI+ ++L+ + + + + + + + Sbjct 266 RQYAKKIIPTAVSLELQKNEVNVSAIKQLFMDCDNEEHK--------------------- 304 Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 IL Y + I +IIF +TK + L ++G Sbjct 305 -------------YTILSELYGLLTI-----GSSIIFVKTKQTANLLYAKLKKEG----- 341 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD- 594 LHGD + +R + ++ F++G + LI T+V ARGIDI V V+N LP Sbjct 342 ----HQVSILHGDLQSQDRDRLIDDFREGRSKVLITTNVLARGIDIPSVSMVVNYDLPTL 397 Query 595 -----EKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGC 649 + YVHRIGR GR R G+AIS + +K T++ D Sbjct 398 PNGQADPSTYVHRIGRTGRFGRTGVAISFIHDKKSFEVLSAIQKYFGDIEITKVPTDDLD 457 Query 650 TIWYNEMQLLS 660 + + L Sbjct 458 EMETIVKKALK 468 Score = 64.8 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 19/74 (26%), Positives = 44/74 (59%), Gaps = 2/74 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+G+ E+ + + M + P+ IQ +++PL++ +++ +++G+GKT AFS+ Sbjct 78 VKSFEELGLSEELLKGLYAMKFQKPSKIQEKALPLLIRDPPHNMIAQSQSGTGKTAAFSL 137 Query 59 PVIQIVYETLKDQQ 72 ++ V + Q Sbjct 138 TMLTRVDPNVNSTQ 151 >sp|Q4PEX7|DBP8_USTMA ATP-dependent RNA helicase DBP8 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP8 PE=3 SV=2 Length=531 Score = 268 bits (685), Expect = 6e-80, Method: Composition-based stats. Identities = 112/509 (22%), Positives = 186/509 (37%), Gaps = 46/509 (9%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV---KSQHSGNAQVTQTKFLP 284 F + + ++ + + K P + + +G + SG L Sbjct 40 FSSIGISPMLIR-SLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCFALPILN 98 Query 285 NAPK------ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K A+++ P+REL Q + LR L++GG+ Q S L N Sbjct 99 KLIKDMVGGFAVVLTPTRELGVQLHEQFVAVGE-GARMGLRCALVLGGMDMMKQASELAN 157 Query 339 -GVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 ++V TPGRL D + +G L + +FLVLDEAD LL+ + + +++ +P Sbjct 158 LRPHVIVATPGRLVDHLRSGGGEEWGLRRCKFLVLDEADRLLTDTFKPELEYLYSVLPSA 217 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEK---IMHFPTWVDLKGEDSVPDTVHHVVVPVNP- 450 K LQ ++ +ATL V+ + K P ++ + P+T+ V V Sbjct 218 ----KTLQTLLFTATLTEQVVEFANAKRPEGKPAPMVCKIEMDTKTPETLEQRYVFVPSH 273 Query 451 -KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ- 508 + L+ L I+ + E E + + +DQ Sbjct 274 VREPYLYHILRHPPIKPSSERVRKLNAKHQADRERKEENQRKSGKRRRTHHASDSDLDQD 333 Query 509 ---------AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 IIF L + G V LH + ER +NL+ Sbjct 334 DDAALFLPATIIFTARCKTAATLSGMLAELG---------IPNVSLHSHLRQSERSENLQ 384 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 F+ V LI TDV +RG+DI V VIN LP Q+YVHR+GR R + G AIS + Sbjct 385 TFRAQRVPVLIATDVGSRGLDIPDVELVINWDLPSAWQDYVHRVGRTARNGKRGFAISFI 444 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE-PDIK 678 V + + T+L+ ++ ++ + + + + + Sbjct 445 TERDIDVIHSIEDKINTKL--TQLEGLEDEDKILEKLNAVATAKRVATMALHDSQFGERQ 502 Query 679 VPVDEFDGKVTYGQKRAAGGGSYKGHVDI 707 +KRA+ GH Sbjct 503 QRNQHKQLARLKAEKRASKKAKSAGHDQQ 531 Score = 94.4 bits (233), Expect = 6e-19, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 10/111 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS +G+ P + +++ + +PT IQ+ +IP +L G D++ A+TGSGKT F++P++ Sbjct 38 TSFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGRDLVGGAQTGSGKTLCFALPIL 97 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCC 111 + + + + + + +++ A G+ GL C Sbjct 98 NKLIKDM---------VGGFAVVLTPTRELGVQLHEQFVAVGEGARMGLRC 139 >sp|Q4P6N0|HAS1_USTMA ATP-dependent RNA helicase HAS1 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=HAS1 PE=3 SV=2 Length=574 Score = 269 bits (688), Expect = 6e-80, Method: Composition-based stats. Identities = 83/420 (20%), Positives = 152/420 (36%), Gaps = 64/420 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 + ++ G + + + KF P N A+I+ P+RELA Q Sbjct 82 PPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRLKFKPRNGTGAIIISPTRELALQIFGV 141 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQV 364 K+ + +I+GG R + L+ GV+++V TPGRL D + +T S + Sbjct 142 AKELMAHHHQT---FGIIMGGANRRAEADKLQKGVNLIVATPGRLLDHLQNTKGFVFSNL 198 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 + L +DEAD +L G+ D + ++ +P Q ++ SAT + V+ L+ + Sbjct 199 KALCIDEADRILEIGFEDEMRQIVKILP-----NDNRQSMLFSAT-QTTKVQDLARISLR 252 Query 425 -FPTWVDLKGE--DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 P ++++ + S + V Sbjct 253 PGPLYINVHADLAASTVSRLEQGYVVCESDR----------------------------- 283 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + +K++ + I+F + Sbjct 284 -----------RFLLLFTFLKKNAGKKIIVFMSSCNSVKYHSDLL---------NFIDVP 323 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 + LHG +K +R + L+CTDVAARG+DI V ++I PD+ ++Y+H Sbjct 324 VLDLHGKQKQQKRTNTFFEYCNAPCGTLLCTDVAARGLDIPSVDWIIQFDPPDDPRDYIH 383 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R+GR RA G ++ + E + D + +L+S+ Sbjct 384 RVGRTARAGNSGKSLLFLLPT-ELGFLRFLKVAKVPLNEYTFPSDKVANVQGQLEKLISK 442 Score = 102 bits (255), Expect = 2e-21, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 48/93 (52%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + +A++ M + T++QA IP ++ G DVL AA+TGSGKT +F IP I++ Sbjct 52 FSILDLSEPTRKAIDAMGFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEM 111 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 ++ + G T S + + + Sbjct 112 LHRLKFKPRNG-----TGAIIISPTRELALQIF 139 >sp|Q40469|IF4A6_TOBAC Eukaryotic initiation factor 4A-6 (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1 Length=253 Score = 259 bits (661), Expect = 6e-80, Method: Composition-based stats. Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 60/305 (20%) Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 +VVGTPGR+ D++ L ++ VLDEAD +LS+G+ D I + +P + Sbjct 1 HVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQLLP------PK 54 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 +QV + SAT+ + +++ K M+ P + +K ++ + + V V+ + +L Sbjct 55 IQVGIFSATMPP-EALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKL----- 108 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 E + + Q++IF T+ D Sbjct 109 ----------------------------------ETLCDLYETLAITQSVIFVNTRRKVD 134 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L +G + HGD + R + F+ G R LI TD+ ARGID Sbjct 135 WLTDKM---------RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 185 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 + V VIN LP + +NY+HRIGR GR R G++I+ V + E++ + + + YN Sbjct 186 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTKDDERMLFDI-----QKFYN 240 Query 641 TRLKE 645 ++E Sbjct 241 VVIEE 245 >sp|A4RIF1|DBP5_PYRO7 ATP-dependent RNA helicase DBP5 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP5 PE=3 SV=2 Length=477 Score = 266 bits (680), Expect = 8e-80, Method: Composition-based stats. Identities = 107/472 (23%), Positives = 180/472 (38%), Gaps = 79/472 (17%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 LGL I + ++ L +A S++ G Sbjct 74 LGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPP------RNMIAQSQSGTGKTGAFVV 127 Query 272 SGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 + ++V + PN P+AL + PSRELA Q + I+ ++ L I G +R+ Sbjct 128 TILSRVDFNQ--PNQPQALALAPSRELARQIQSVIQSIGQFC--TGLVVDAAIPGAISRE 183 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQ 390 ++VVGTPG + DL+ + ++SQ++ LV+DEAD +L QG + R+ N Sbjct 184 TGVK----ANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNM 239 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 +P K +Q ++ SAT VK +EK + L+ ++ + + + Sbjct 240 LP------KTIQTLLFSATFPDH-VKSYAEKFAPQANQMKLRQQELTVKGISQMYMDCPS 292 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 E ++L Y + I ++ Sbjct 293 ----------------------------------LKEKYEVLCKLYGLMTI-----GSSV 313 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IF +T+ D +++ G LHG + ER Q L+ F+ G + LI Sbjct 314 IFVKTRESADEIQRRMEADG---------HKVSALHGAFQGQERDQLLDDFRSGKSKVLI 364 Query 571 CTDVAARGIDIHGVPYVINVTLP--------DEKQNYVHRIGRVGRAERMGLAISLVATE 622 T+V ARGID+ V VIN +P + + Y+HRIGR GR R+G++IS V Sbjct 365 TTNVLARGIDVSSVSMVINYDIPMKGPGDQSPDAETYLHRIGRTGRFGRVGVSISFVHDR 424 Query 623 KEKV-WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 K + G + + ++ S + T + Sbjct 425 KSFTALSSIAEHYGIDLIQLSPDDWDDTEVKVQDVIKSSRAKPDYAPTQEKA 476 Score = 74.4 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 23/128 (18%), Positives = 51/128 (40%), Gaps = 13/128 (10%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVIQI 63 E+G+ I + M++ P+ IQA ++PL+L +++ +++G+GKTGAF + ++ Sbjct 73 ELGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSR 132 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQS---REVKEWH 120 V + + + + + GL + + Sbjct 133 V--------DFNQPNQPQALALAPSRELARQIQSVIQSIGQFCTGLVVDAAIPGAISRET 184 Query 121 GCRATKGL 128 G +A + Sbjct 185 GVKANVVV 192 >sp|Q8K4L0|DDX54_MOUSE ATP-dependent RNA helicase DDX54 OS=Mus musculus OX=10090 GN=Ddx54 PE=1 SV=1 Length=874 Score = 276 bits (706), Expect = 8e-80, Method: Composition-based stats. Identities = 108/524 (21%), Positives = 187/524 (36%), Gaps = 75/524 (14%) Query 220 PHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN--- 274 K F + L K G + + + D + SG Sbjct 89 KKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAC 148 Query 275 -----AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + + + +ALI+ P+RELA QT+ K+ K+ L+ LI+GG Sbjct 149 FLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKFTG---LKTALILGGDKM 205 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 DQ + L DI++ TPGRL + L L V ++V DEAD L G+++ + + Sbjct 206 EDQFAALHENPDIIIATPGRLVHVAVEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIG 265 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 ++P Q ++ SATL V+ + + P + L + + + + + V Sbjct 266 RLPGGH------QTVLFSATLPKLLVE-FARAGLTEPVLIRLDVDSKLNEQLKTSFLLVR 318 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 T ++ DQ Sbjct 319 EDTKAAVLLYLLQNVVR--------------------------------------PQDQT 340 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 ++F TK + L + + QG SC ++ RK NL +F L Sbjct 341 VVFVATKHHAEYLTELLMGQG---------VSCAHIYSALDQTARKINLAKFTHNKCSTL 391 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 I TD+AARG+DI + VIN + P + + ++HR+GRV RA R G A SLVA ++ Sbjct 392 IVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLD 451 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVT 689 + G+ R E+ +L + + + + + ++ + Sbjct 452 LHLFLGRSVTLARPCEEPSVADAVGRDGVLGRVPQSV---VDDEDSSLQTAMGASLDLQG 508 Query 690 YGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLP 733 + Y +P +++ + LG P Sbjct 509 LHRVANNAQQQYVRSRPAPSPES-----IKRAKELDLAELGLHP 547 Score = 98.7 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 26/94 (28%), Positives = 45/94 (48%), Gaps = 7/94 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + + + + + +PT IQ ++IP+IL G DV+ A TGSGKT F +P+ + Sbjct 97 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 156 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD 97 + + Q G + S + + Sbjct 157 L--KARSAQTGAR-----ALILSPTRELALQTMK 183 >sp|Q15N18|RHLB_PSEA6 ATP-dependent RNA helicase RhlB OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) OX=3042615 GN=rhlB PE=3 SV=1 Length=421 Score = 264 bits (675), Expect = 9e-80, Method: Composition-based stats. Identities = 104/440 (24%), Positives = 173/440 (39%), Gaps = 66/440 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 DL + ++ + ++ L + ++ G + Sbjct 11 FADLPINEQVVKALSAANFSHCTPIQALSLPPLL--------EGNDIAGQAQTGTGKTIA 62 Query 269 SQHSGNA-QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + ++ + P+A+I+ P+RELA Q N+ + ++ L LI GG Sbjct 63 FLVATFHYLLSNPQPTKKQPRAIIMAPTRELAVQIFNDAELLSQHTG---LSLGLIYGGE 119 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 + Q LE GVDI++GT GR+ D +L+ ++ VLDEAD + G+ I + Sbjct 120 GYQSQREKLEEGVDIIIGTTGRIIDYYKQNIFSLAGIQVAVLDEADRMFDLGFIKDIRYL 179 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 N++P+ T ++ SATL S+ V++L+ + M PT V ++ E + Sbjct 180 FNRMPKPT----ERLSMLFSATL-SYRVQELAYEHMDNPTHVQVEPERKTGTRIK----- 229 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 E K + ++E D Sbjct 230 -----------------------------------EELFYPSDEDKMALLLSLMEEEWPD 254 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +AI+F TK C+ + + G L GD ++R + LE F G + Sbjct 255 KAIVFANTKHSCEKVADWLQADG---------HRVGLLSGDVPQNKRLKILEDFTSGKLD 305 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDVAARG+ I V +V N LPD+ ++YVHRIGR GRA + G +IS Sbjct 306 ILVATDVAARGLHIPMVSHVFNYDLPDDAEDYVHRIGRTGRAGQSGSSISFACERYALNL 365 Query 628 YHVCSSRGKGCYNTRLKEDG 647 + + T + D Sbjct 366 PAIETYIEHAIPVTEYQADA 385 Score = 94.4 bits (233), Expect = 4e-19, Method: Composition-based stats. Identities = 56/353 (16%), Positives = 119/353 (34%), Gaps = 59/353 (17%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++ + ++ +A+ ++ T IQA S+P +L G D+ A+TG+GKT AF + Sbjct 9 THFADLPINEQVVKALSAANFSHCTPIQALSLPPLLEGNDIAGQAQTGTGKTIAFLVATF 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + + Q KK I + + + ++ E+ H Sbjct 69 HYLLS---NPQPTKKQPRAI--IMAPTRELAVQIFN---------------DAELLSQHT 108 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDN 181 + + G+ G+ + + L+ G D + + D Sbjct 109 GLSLGLIYGGE---------------GYQSQREKLEEGVDII--------IGTTGRIIDY 145 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNG-KDLGLAFE---IPPHMKNQALFPACVLKNAE 237 Y + I + +D+ F KD+ F P + + E Sbjct 146 YKQNIFSLAGIQVAV-LDEADRMFDLGFIKDIRYLFNRMPKPTERLSMLFSATLSYRVQE 204 Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L + + + ++ + S A + KA++ ++ Sbjct 205 LAYEHMDNPTHVQVEPERKTGTRIKEELFYPSDEDKMALLLSLMEEEWPDKAIVFANTK- 263 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGT 346 ++ ++ ++ R L+ G V +L +LE+ +DI+V T Sbjct 264 ------HSCEKVADWLQADGHRVGLLSGDVPQNKRLKILEDFTSGKLDILVAT 310 >sp|Q1EA54|HAS1_COCIM ATP-dependent RNA helicase HAS1 OS=Coccidioides immitis (strain RS) OX=246410 GN=HAS1 PE=3 SV=1 Length=604 Score = 270 bits (689), Expect = 9e-80, Method: Composition-based stats. Identities = 83/429 (19%), Positives = 158/429 (37%), Gaps = 72/429 (17%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L L+ + ++ ++ + + +K G + Sbjct 129 LNLSEKTLKAIQEMGFETMTEIQRRGIP--------PLMAGRDVLGAAKTGSGKTLSFLI 180 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ +F P N ++V P+RELA Q ++ + ++IGG R Sbjct 181 PAVEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELMAHHSQTY---GIVIGGANRR 237 Query 331 DQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 + L GV++++ TPGRL D + +T ++ LV+DEAD +L G+ D + ++ Sbjct 238 AEAEKLTKGVNLLIATPGRLLDHLQNTDGFVFKNLKALVIDEADRILEVGFEDEMRQIVK 297 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLK--GEDSVPDTVHHVVV 446 +P + Q ++ SAT + V+ L+ + P ++++ E S + + V Sbjct 298 ILP-----SEDRQTMLFSAT-QTTKVEDLARISLRPGPLYINVDHRKEHSTVEGLEQGYV 351 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + + +K + Sbjct 352 ICDSDK----------------------------------------RFLLLFSFLKRNLK 371 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I+F + + + LHG +K +R F Sbjct 372 KKIIVFFSSCNCVKYHAELL---------NYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQ 422 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR-AERMGLAISLVATEKEK 625 LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R A G ++ + + Sbjct 423 GTLICTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGANGKGRSLMFLQPSEVG 482 Query 626 VWYHVCSSR 634 H+ +R Sbjct 483 FLKHLKDAR 491 Score = 103 bits (257), Expect = 1e-21, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 49/93 (53%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + + +A++EM + T+IQ IP ++ G DVL AA+TGSGKT +F IP +++ Sbjct 126 FTELNLSEKTLKAIQEMGFETMTEIQRRGIPPLMAGRDVLGAAKTGSGKTLSFLIPAVEM 185 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + G T S + + + Sbjct 186 LSALRFKPRNG-----TGVIVVSPTRELALQIF 213 >sp|Q4HY71|DBP5_GIBZE ATP-dependent RNA helicase DBP5 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP5 PE=3 SV=1 Length=488 Score = 266 bits (680), Expect = 1e-79, Method: Composition-based stats. Identities = 107/473 (23%), Positives = 188/473 (40%), Gaps = 79/473 (17%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 +DLGL ++ + + ++ L + +A S++ G Sbjct 78 QDLGLREDLLKGLLSLNFLKPSKVQGKSLPLMLSDPP------RNMLAQSQSGTGKTAAF 131 Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + ++V +K P+ P+AL + PSRELA Q I ++++N + I GV Sbjct 132 VTAILSRVDFSK--PDQPQALALAPSRELARQIEGVINAIGRFVENK--KVAAAIPGVLP 187 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMH 388 R + ++VGTPG + D++ +L++SQ+R LVLDEAD +L QG D ++ Sbjct 188 RGE----PVRASVIVGTPGTVMDIIRRRQLDISQLRVLVLDEADNMLDQQGLGDQCLKVK 243 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 N +P K +QV++ SAT +V K + K + L+ + + + + Sbjct 244 NMLP------KEIQVLLFSATFP-ENVMKYAGKFAPNAHSLKLQRSELTVKGISQMFIDC 296 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + IL Y + I Q Sbjct 297 PDDNMK----------------------------------YDILCKLYGLMTI-----GQ 317 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 ++IF +T+ +E+ + G LH ER L +F++G+ + Sbjct 318 SVIFVKTRDSASEIERRMVADG---------HKVSALHAAFDGAERDNLLTKFRQGENKV 368 Query 569 LICTDVAARGIDIHGVPYVINVTLP--------DEKQNYVHRIGRVGRAERMGLAISLVA 620 LI T+V ARGID+ V VIN +P + + Y+HRIGR GR R+G++IS V Sbjct 369 LITTNVLARGIDVSSVSMVINYDIPMKGRGDTEPDAETYLHRIGRTGRFGRVGVSISFVY 428 Query 621 TEKE-KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 +K + G ++ E+ + + + ++ Sbjct 429 DKKSFDALSKIAEMYGIDLVKLDTEDWDEAEERVKEVIKKNRAQASYAPSATE 481 Score = 75.6 bits (184), Expect = 6e-13, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 44/75 (59%), Gaps = 2/75 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIP 59 + ++G+ ++ + + +++L P+ +Q +S+PL+L ++L +++G+GKT AF Sbjct 75 TTWQDLGLREDLLKGLLSLNFLKPSKVQGKSLPLMLSDPPRNMLAQSQSGTGKTAAFVTA 134 Query 60 VIQIVYETLKDQQEG 74 ++ V + DQ + Sbjct 135 ILSRVDFSKPDQPQA 149 >sp|Q818H2|CSHB_BACCR DEAD-box ATP-dependent RNA helicase CshB OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=cshB PE=2 SV=1 Length=436 Score = 265 bits (676), Expect = 1e-79, Method: Composition-based stats. Identities = 88/392 (22%), Positives = 167/392 (43%), Gaps = 60/392 (15%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 + S+ G ++ ++ + +I P+RELA+Q I + K+ Sbjct 45 IGQSQTGSGKTHAYLLPTLNRINASRE---EVQLVITAPTRELAQQIYEEIVKLTKFCAE 101 Query 316 PK-LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 + + +IGG + + L+ IVVGTPGR+ DLV L + + +++DEAD Sbjct 102 DQMITARCLIGGTDKQRSIEKLKKQPHIVVGTPGRIKDLVEEQALFVHKANTIIVDEADL 161 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 +L G+ ++++ ++P K LQ++V SAT+ +K +K M P + + + Sbjct 162 MLDMGFIHDVDKIAARMP------KNLQMLVFSATIP-QKLKPFLKKYMENPEHIHINPK 214 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + H +VP + K Sbjct 215 QVAAGNIEHYLVPSKHRN----------------------------------------KI 234 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + + + + K A++F TK D + +++G +HGD P +R Sbjct 235 DLVHKMLLQFKPYLAVVFTNTKKMADQVADGLMERG---------LKVGRIHGDLSPRDR 285 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 K+ +++ + + ++++ TD+AARGIDI G+ +VIN P + +VHR+ R RA G+ Sbjct 286 KKMMKQIRDLEFQYIVATDLAARGIDIQGISHVINYQPPSDLDFFVHRVARTARAGHSGI 345 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 A+++ E+ + R + L+ D Sbjct 346 AVTIYDPANEEALDSLEKQRHIEFKHVDLRGD 377 Score = 91.0 bits (224), Expect = 5e-18, Method: Composition-based stats. Identities = 62/374 (17%), Positives = 136/374 (36%), Gaps = 67/374 (18%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F++ P + AV E+ + PT IQ + P++ G V+ ++TGSGKT A+ +P + Sbjct 5 TFTQYDFKPFLIDAVRELRFTEPTGIQQKIFPVVKKGVSVIGQSQTGSGKTHAYLLPTLN 64 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC 122 + + ++ Q + + Y+ C + + + Sbjct 65 RINASREEVQL---------VITAPTRELAQQIYEEIVKL----TKFCAEDQMITARCLI 111 Query 123 RAT---KGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQF 179 T + + K K + G + DL ++ F H Sbjct 112 GGTDKQRSIEKLKKQPHIVVGTPGRIK----------DLVEEQALFV--------HKANT 153 Query 180 DNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELK 239 E M D +G D+D +A +P +++ +F A + + + Sbjct 154 IIVDEADLMLD-MGFIHDVD-------------KIAARMPKNLQ-MLVFSATIPQKLKPF 198 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK-ALIVEPSREL 298 E + + + + Y+V S+H + L P A++ ++++ Sbjct 199 LKKYMENPEHIHINPKQVAAGNIEHYLVPSKHRNKIDLVHKMLLQFKPYLAVVFTNTKKM 258 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI----VVGTPGRLDDLV 354 A+Q + + + L+ I G ++ RD+ +++ D+ +V T DL Sbjct 259 ADQVADGLME-------RGLKVGRIHGDLSPRDRKKMMKQIRDLEFQYIVAT-----DLA 306 Query 355 STGKLNLSQVRFLV 368 + G +++ + ++ Sbjct 307 ARG-IDIQGISHVI 319 >sp|P0CR02|DBP8_CRYNJ ATP-dependent RNA helicase DBP8 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP8 PE=3 SV=1 Length=619 Score = 270 bits (690), Expect = 1e-79, Method: Composition-based stats. Identities = 96/452 (21%), Positives = 165/452 (37%), Gaps = 35/452 (8%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKF--NFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 F + L + + + ++ + D Sbjct 138 QPNGLASASKPSADVTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAK 197 Query 270 QHSGNAQVTQTKFL------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 SG + P A+++ P+RELA Q K + L I Sbjct 198 TGSGKTMAFALPIVERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLG---LTTATI 254 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGY 380 +GG+ Q LE I+V TPGRL DL+ +G + LS+VR LVLDEAD +L+ + Sbjct 255 VGGMDMMKQAQELEARPHIIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSF 314 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK----IMHFPTWVDLKGEDS 436 + + + +QIP + Q + +AT+ S + +L+ K P + + Sbjct 315 APELAYLFSQIPA------KRQTCLFTATV-SEAIMELANKEPPAGKQRPFVYRVASDTL 367 Query 437 VPDTVHHVVVPVNPKT-DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + + + + D + ++ + DV + + + + K K Sbjct 368 TVSNLKQKYLFIPSQIRDPYLLYILQNPLEDIDVALRVDPKKAKAREREAALGKKGKKPR 427 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 A + +IF + V LH +R Sbjct 428 QAKEEEDAPSVPSTVIFTQRCATA---------HLLHLLLNSLDIPSVPLHSHLTQPQRL 478 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 +L RF+ +V L+ TDV +RG+DI V VIN P +YVHR+GR RA R G+A Sbjct 479 LSLARFRAHEVPVLVTTDVGSRGLDIPEVAMVINWDCPRRSDDYVHRVGRTARAGRGGVA 538 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNTRLKEDG 647 ++++ ++ + +L ED Sbjct 539 VTIITERDTELVKIIEDEVNVRLEELKLDEDK 570 Score = 91.3 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 22/96 (23%), Positives = 43/96 (45%), Gaps = 9/96 (9%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +G+ + A+ ++ PT+IQA + IL G D + A+TGSGKT AF++P+++ Sbjct 153 TFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDR 98 + + + + ++ Sbjct 213 RI---------ARDPFGVWAVVLTPTRELAYQLSEQ 239 >sp|P0CQ87|DBP5_CRYNB ATP-dependent RNA helicase DBP5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP5 PE=3 SV=1 Length=546 Score = 268 bits (684), Expect = 1e-79, Method: Composition-based stats. Identities = 123/566 (22%), Positives = 212/566 (37%), Gaps = 113/566 (20%) Query 148 GWS--TMQASLDLGTDKFGFGFGGTGKKSHNKQFD-NYGEEFTMHDTIGCYLDIDKGHVK 204 GW A D G G GG+G +++ FD + + Sbjct 62 GWGEPAPSAPADNGWADAGASNGGSGANNNDGWFDAPVPPSSQPPKKEASDIQLQDDTEG 121 Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFG--------EEEFKFPPKDGFV 256 N + + N L+ K L + ++ K K + Sbjct 122 LITNTFQVEVKLADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPL 181 Query 257 ALSKAPDGYIVKSQHSGNA-------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 LS P I +SQ +++ P+A+ + PSRELA Q + Q Sbjct 182 LLSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVVDQI 241 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFL 367 ++ ++ L I G +R+ S ++ I++GTPG L D++ G L+ +R L Sbjct 242 GQF---TQVGTFLAIPGSWSRN--SRIDK--QILIGTPGTLVDMLMRGSRILDPRMIRVL 294 Query 368 VLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 VLDEAD L+ QG + R+ +P +Q ++ SAT + DV++ +++ Sbjct 295 VLDEADELIAQQGLGEQTFRIKQLLP------PNVQNVLFSATFND-DVQEFADRFAPEA 347 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 + L+ ED D + + + + + Sbjct 348 NKIFLRKEDITVDAIRQLYLECDSEDQ--------------------------------- 374 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 K E + Q+I+FC+ K+ D++ + I +G + LH Sbjct 375 ------KYEALSALYDCLVIGQSIVFCKRKVTADHIAERLISEG---------HAVASLH 419 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD--------EKQN 598 GD+ ER L+ F+ G+ + LI T+V ARGIDI V V+N +PD + + Sbjct 420 GDKLSQERDAILDGFRNGETKVLITTNVIARGIDIPAVNMVVNYDVPDLGPGGNGPDIET 479 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKV-WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 Y+HRIGR GR R G ++ + K + ++ GK Sbjct 480 YIHRIGRTGRFGRKGCSVIFTHDYRSKSDVERIMNTLGKP-------------------- 519 Query 658 LLSEIEEHLNCTISQVEPDIKVPVDE 683 + +I+ I Q+E +K+ + Sbjct 520 -MKKIDARSTTDIEQLEKALKLAMKG 544 Score = 86.3 bits (212), Expect = 2e-16, Method: Composition-based stats. Identities = 17/74 (23%), Positives = 43/74 (58%), Gaps = 2/74 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+ + ++ + + + P+ IQ +++PL+L +++ +++G+GKT AF++ Sbjct 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206 Query 59 PVIQIVYETLKDQQ 72 ++ V T+ Q Sbjct 207 NMLSRVDPTIPTPQ 220 >sp|Q59ZH9|MAK5_CANAL ATP-dependent RNA helicase MAK5 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MAK5 PE=3 SV=2 Length=782 Score = 274 bits (700), Expect = 1e-79, Method: Composition-based stats. Identities = 104/472 (22%), Positives = 175/472 (37%), Gaps = 60/472 (13%) Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP--------------- 284 + + +FK P + A G V + + + T +P Sbjct 210 YGLSQLDFKKPTPIQKETIPIALSGKDVIGKATTGSGKTLAYGIPILEKYIQSLNLIKQN 269 Query 285 ------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 N P +I P+RELA Q ++++ + KY + I GG++ + Q +L + Sbjct 270 NKDKKINHPTGIIFAPTRELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRH 329 Query 339 GVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI---- 391 G I+V TPGR+ +LV L+ + +VLDEAD LL G+ D ++ Sbjct 330 GPGIIVATPGRMLELVQGDSELAKRLASIDIIVLDEADRLLQDGHFDEFEKILELFGKNR 389 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P+ S + Q +V SAT +KL L G D + Sbjct 390 PKSKSIEWKWQTLVFSATFSRDLFRKLDRH--QKGKSSSLMGNDEIV------------- 434 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 L E+L + V A E E + Y + +K ++ Sbjct 435 -QLLNEKLKFKDKKPTLVDANPKEIVSGQITEALVECGPTERDLYLYYFLLMYK-GSTLV 492 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK----KGDVR 567 F + L +H +R + LE+FK K +V Sbjct 493 FANSIDSVKRLVPLLNNL---------NIPAFSIHSSMIQKQRLRALEKFKEASQKNEVA 543 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ +DVAARG+DI + +V++ LP Y+HR GR RA + G+++ + ++ Sbjct 544 VLVASDVAARGLDIPNIDHVVHYHLPRSADVYIHRSGRTARAGKEGVSVMFCSPQEASGP 603 Query 628 YHVCSSR--GKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI 677 G +RL + EM L+S+I+ + + + I Sbjct 604 LRKLRRLVAGNSNKESRLNMHNDVKLLPIEMDLVSQIKPRVEISSKLADASI 655 Score = 99.0 bits (245), Expect = 4e-20, Method: Composition-based stats. Identities = 39/143 (27%), Positives = 61/143 (43%), Gaps = 19/143 (13%) Query 6 EMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 ++G + + ++D+ PT IQ E+IP+ L G DV+ A TGSGKT A+ IP+++ Sbjct 199 DLGSSISAYTLYGLSQLDFKKPTPIQKETIPIALSGKDVIGKATTGSGKTLAYGIPILEK 258 Query 64 VYETL---KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS-----------DGL 109 ++L K + KK + + D + A S GL Sbjct 259 YIQSLNLIKQNNKDKKINHPTGIIFAPTRELAHQVVDHLNKLAKYSPLSTRGIVSITGGL 318 Query 110 CCQSREVKEWHG---CRATKGLM 129 Q ++ HG AT G M Sbjct 319 SIQKQQRLLRHGPGIIVATPGRM 341 >sp|A5E2Z9|HAS1_LODEL ATP-dependent RNA helicase HAS1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=HAS1 PE=3 SV=1 Length=559 Score = 268 bits (685), Expect = 1e-79, Method: Composition-based stats. Identities = 82/428 (19%), Positives = 158/428 (37%), Gaps = 65/428 (15%) Query 213 GLAFEIPPHMKNQALFPACV-LKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 G+ + ++ A + ++ + + +K G + Sbjct 90 GVNYSFEKADFSEPTMKAIKEMGFQKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLL 149 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + K P N +I+ P+RELA Q +Q +Y ++IGG R Sbjct 150 PAVELLYSLKIKPRNGTAVIIITPTRELALQIFGVARQLMEYHSQT---CGIVIGGADRR 206 Query 331 DQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 + + L GV+++V TPGRL D + +T ++ LV+DEAD +L G+ + + ++ Sbjct 207 QEATKLAKGVNLLVATPGRLLDHLKNTQGFVFLNLKALVIDEADRILEIGFEEEMKQIIK 266 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGED--SVPDTVHHVVV 446 +P + Q ++ SAT + V+ L+ + P ++++ E S D + V Sbjct 267 ILP-----NEDRQTMLFSAT-QTTKVEDLARISLRPGPLYINVVPEKDVSTADGLEQGYV 320 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + + +K + Sbjct 321 VCDSDK----------------------------------------RFLLLFSFLKRNIK 340 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I+F + + + LHG +K +R F Sbjct 341 KKIIVFLSSCNSVKFYSELL---------NYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQ 391 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATEKEK 625 L+CTDVAARG+DI V ++I PD+ ++Y+HR+GR R G ++ + + Sbjct 392 GILVCTDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGTDGKGKSLMFLTPSELG 451 Query 626 VWYHVCSS 633 ++ ++ Sbjct 452 FLRYLKAA 459 Score = 102 bits (255), Expect = 2e-21, Method: Composition-based stats. Identities = 28/94 (30%), Positives = 49/94 (52%), Gaps = 5/94 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + +A++EM + T +QA++IP +L G DVL AA+TGSGKT AF +P ++ Sbjct 94 SFEKADFSEPTMKAIKEMGFQKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLLPAVE 153 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 ++Y + G T + + + + Sbjct 154 LLYSLKIKPRNG-----TAVIIITPTRELALQIF 182 >sp|Q3B8Q1|DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus norvegicus OX=10116 GN=Ddx21 PE=2 SV=1 Length=782 Score = 274 bits (700), Expect = 1e-79, Method: Composition-based stats. Identities = 113/447 (25%), Positives = 182/447 (41%), Gaps = 71/447 (16%) Query 209 GKDLGLAFEIPPHMKNQAL--FPAC-----VLKNAELKFNFGEEEFKF---PPKDGFVAL 258 G++ EIP K A FP +LK + F F + F +A Sbjct 166 GEESETEKEIPVEQKEGAFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQ 225 Query 259 SKAPDGYIVKSQHSGNAQVT---QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 ++ G ++ Q + AP+ L++ P+RELA Q + K Sbjct 226 ARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRELANQVSKDFSDITK---- 281 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGL 375 KL GG Q+ + +G+DI+VGTPGR+ D + GKL+L++++ +VLDE D + Sbjct 282 -KLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQM 340 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVDLKGE 434 L G++D + + + Q ++ SAT + V +++K M VDL G+ Sbjct 341 LDMGFADQVEEIL-CVAYKKDSEDNPQTLLFSATCPHW-VFNVAKKYMKSTYEQVDLIGK 398 Query 435 DS--VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + TV H+ + + W+E ++ Sbjct 399 KTQKAAITVEHLAIKCH-----------------------------------WTERAAVI 423 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 V + + + IIFC TK D L Q + LHGD Sbjct 424 GDVIRVYSGHQ---GRTIIFCETKKDAQELSQNTCIKQ----------DAQSLHGDIPQK 470 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 +R+ L+ F+ G+ L+ T+VAARG+DI V V+ P + ++Y+HR GR GRA R Sbjct 471 QREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRT 530 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCY 639 G+ I ++E V G Sbjct 531 GVCICFYQHKEEYQLAQVEQKAGIKFK 557 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 24/90 (27%), Positives = 43/90 (48%), Gaps = 3/90 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AFS + E + ++ IQA++ + G D++ A TG+GKT +F+IP+I+ Sbjct 183 AFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIE 242 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQ 92 + L QE K+G+ + + Sbjct 243 KLQGGL---QERKRGRAPQVLVLAPTRELA 269 >sp|Q6BV58|MAK5_DEBHA ATP-dependent RNA helicase MAK5 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=MAK5 PE=3 SV=1 Length=790 Score = 274 bits (700), Expect = 1e-79, Method: Composition-based stats. Identities = 95/418 (23%), Positives = 167/418 (40%), Gaps = 38/418 (9%) Query 275 AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 A+ Q+K + N P +I P+RELA Q ++++ + K+ + + I GG++ + Q Sbjct 266 AKANQSKKVINPPTGIIFAPTRELAHQVVDHLNRIAKFTPLSQHGIVSITGGLSIQKQER 325 Query 335 VLENGVDIVVGTPGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 +L +G IVV TPGR +L+ LS +VLDEAD LL G+ D ++ Sbjct 326 LLSHGPGIVVATPGRFLELLQKDMALVQRLSCTDIVVLDEADRLLQDGHFDEFVKILELF 385 Query 392 PQVTSDGKR-----LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + + Q +V SAT KL + + ++ D + + Sbjct 386 GKHRPRDNKELEWKWQTLVFSATFSRDLFGKLDKHLKSNKNKEEMGSSLIDNDEILQL-- 443 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 L ++L + V A E E + Y + + Sbjct 444 --------LNDKLKFKDSKPTLVDANPKEMVAGQITEALVECGPTERDLYLYYFLLLYP- 494 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 ++F + L + + +H +R + LERFK+ Sbjct 495 GSTLVFANSIDSVKRLAPFLNNL---------KVPTFSIHSSMIQKQRLRTLERFKEASS 545 Query 567 R----FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + LI +DVAARG+DI + +V + LP Y+HR GR GRA + G++I + + Sbjct 546 KNSTAVLIASDVAARGLDIPNIDHVAHYHLPRSADVYIHRSGRTGRAGKEGVSIMFCSPQ 605 Query 623 KE----KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 + + + ++ K TRL + EM L+S+I+ + + + Sbjct 606 ESSGPLRKLRKLVANNTKK--RTRLNVHNDVKLLPLEMDLVSQIKPRVTLASKLADAE 661 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 50/235 (21%), Positives = 86/235 (37%), Gaps = 29/235 (12%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + ++ + + +++ PT IQ +IPL + G DV+ A TGSGKT A+ IP+++ Sbjct 201 WDDLSLSSFTLNGLSALEYEKPTAIQKRTIPLAIEGKDVIGKAITGSGKTLAYGIPILER 260 Query 64 VYETL-KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI-----------GSDGLCC 111 + + K Q K + + D + A + GL Sbjct 261 HLQKMAKANQSKKVINPPTGIIFAPTRELAHQVVDHLNRIAKFTPLSQHGIVSITGGLSI 320 Query 112 QSREVKEWHG---CRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGT---DKFGF 165 Q +E HG AT G +++ + C +A L D+F Sbjct 321 QKQERLLSHGPGIVVATPGRFLELLQKDMALVQRLSCTDIVVLDEADRLLQDGHFDEFVK 380 Query 166 GFGGTGKK--SHNKQFDNYGEEFT-----MHDTIGCYLDIDKGHVKFSKNGKDLG 213 GK NK+ + + D G H+K +KN +++G Sbjct 381 ILELFGKHRPRDNKELEWKWQTLVFSATFSRDLFGKL----DKHLKSNKNKEEMG 431 >sp|Q5BBY1|HAS1_EMENI ATP-dependent RNA helicase has1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=has1 PE=3 SV=1 Length=609 Score = 269 bits (688), Expect = 1e-79, Method: Composition-based stats. Identities = 85/434 (20%), Positives = 159/434 (37%), Gaps = 72/434 (17%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K +LGL+ + +K ++ + + +K G Sbjct 128 KKFTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLA--------GRDVLGAAKTGSGKT 179 Query 267 VKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + ++ +F P N ++V P+RELA Q ++ ++IG Sbjct 180 LAFLIPAIEMLSALRFKPRNGTGVIVVSPTRELALQIFGVARELLTAHSQTY---GIVIG 236 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G R + L GV++++ TPGRL D + +T ++ LV+DEAD +L G+ D + Sbjct 237 GANRRAEAEKLTKGVNLLIATPGRLLDHLQNTPGFVFKNLKTLVIDEADRILEVGFEDEM 296 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLK--GEDSVPDTV 441 ++ +P + Q ++ SAT + V+ L+ + P ++++ E S + + Sbjct 297 RQIIKILP-----NEDRQTMLFSAT-QTTKVEDLARISLRPGPLYINVDHRKEHSTVEGL 350 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 V + + Sbjct 351 EQGYVICEADK----------------------------------------RFLLLFSFL 370 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K + + I+F + + + LHG +K +R F Sbjct 371 KRNLKKKIIVFFSSCNCVKYHAELL---------NYIDLPVLDLHGKQKQQKRTNTFFEF 421 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR-AERMGLAISLVA 620 LICTDVAARG+DI V ++I PD+ ++Y+HR+GR R A G ++ + Sbjct 422 CNAKQGVLICTDVAARGLDIPAVDWIIQFDPPDDTRDYIHRVGRTARGANGRGRSLMFLQ 481 Query 621 TEKEKVWYHVCSSR 634 + ++ +R Sbjct 482 PSEVGFLKYLKEAR 495 Score = 109 bits (272), Expect = 2e-23, Method: Composition-based stats. Identities = 32/95 (34%), Positives = 50/95 (53%), Gaps = 5/95 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+E+G+ + Q ++EM + T+IQ +IP +L G DVL AA+TGSGKT AF IP I Sbjct 128 KKFTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAI 187 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +++ + G T S + + + Sbjct 188 EMLSALRFKPRNG-----TGVIVVSPTRELALQIF 217 >sp|P0CQ86|DBP5_CRYNJ ATP-dependent RNA helicase DBP5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP5 PE=3 SV=1 Length=546 Score = 267 bits (683), Expect = 2e-79, Method: Composition-based stats. Identities = 124/566 (22%), Positives = 212/566 (37%), Gaps = 113/566 (20%) Query 148 GWS--TMQASLDLGTDKFGFGFGGTGKKSHNKQFD-NYGEEFTMHDTIGCYLDIDKGHVK 204 GW A D G G GG+G +++ FD + + Sbjct 62 GWGEPAPSAPADNGWADAGASNGGSGANNNDGWFDAPVPPSSQPPKKEASDIQLQDDTEG 121 Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFG--------EEEFKFPPKDGFV 256 N + + N L+ K L + ++ K K + Sbjct 122 LITNTFQVEVKLADLQGDPNSPLYSVQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPL 181 Query 257 ALSKAPDGYIVKSQHSGNA-------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 LS P I +SQ +++ P+A+ + PSRELA Q I Q Sbjct 182 LLSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQI 241 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFL 367 ++ ++ L I G +R+ S ++ I++GTPG L D++ G L+ +R L Sbjct 242 GQF---TQVGTFLAIPGSWSRN--SRIDK--QILIGTPGTLVDMLMRGSRILDPRMIRVL 294 Query 368 VLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 VLDEAD L+ QG + R+ +P +Q ++ SAT + DV++ +++ Sbjct 295 VLDEADELIAQQGLGEQTFRIKQLLP------PNVQNVLFSATFND-DVQEFADRFAPEA 347 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 + L+ ED D + + + + + Sbjct 348 NKIFLRKEDITVDAIRQLYLECDSEDQ--------------------------------- 374 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 K E + Q+I+FC+ K+ D++ + I +G + LH Sbjct 375 ------KYEALSALYDCLVIGQSIVFCKRKVTADHIAERLISEG---------HAVASLH 419 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD--------EKQN 598 GD+ ER L+ F+ G+ + LI T+V ARGIDI V V+N +PD + + Sbjct 420 GDKLSQERDAILDGFRNGETKVLITTNVIARGIDIPAVNMVVNYDVPDLGPGGNGPDIET 479 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKV-WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 Y+HRIGR GR R G ++ + K + ++ GK Sbjct 480 YIHRIGRTGRFGRKGCSVIFTHDYRSKSDVERIMNTLGKP-------------------- 519 Query 658 LLSEIEEHLNCTISQVEPDIKVPVDE 683 + +I+ I Q+E +K+ + Sbjct 520 -MKKIDARSTTDIEQLEKALKLAMKG 544 Score = 86.3 bits (212), Expect = 2e-16, Method: Composition-based stats. Identities = 17/74 (23%), Positives = 43/74 (58%), Gaps = 2/74 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+ + ++ + + + P+ IQ +++PL+L +++ +++G+GKT AF++ Sbjct 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206 Query 59 PVIQIVYETLKDQQ 72 ++ V T+ Q Sbjct 207 NMLSRVDPTIPTPQ 220 >sp|A7ESL8|DBP4_SCLS1 ATP-dependent RNA helicase dbp4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp4 PE=3 SV=1 Length=808 Score = 274 bits (700), Expect = 2e-79, Method: Composition-based stats. Identities = 88/455 (19%), Positives = 169/455 (37%), Gaps = 71/455 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 KN +L L+ ++ +++ + + +K G Sbjct 49 KNFSELPLSGPTSSGLEASHFKTLTDVQSKAVPLAL--------KGKDILGAAKTGSGKT 100 Query 267 VKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + + + K+ + ALI+ P+RELA Q +++ +Y LIIG Sbjct 101 LAFLVPVLENLYRQKWTELDGLGALIISPTRELAIQIFEVLRKIGRY---HTFSAGLIIG 157 Query 326 GVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G + +++ L ++I+V TPGR L + T ++ ++ LVLDEAD ++ G+ + Sbjct 158 GRSLQEERERL-GRMNILVCTPGRMLQHMDQTAAFDVDNLQMLVLDEADRIMDMGFQTSV 216 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK--GEDSVPDTVH 442 + + +P K+ Q ++ SAT + V L+ + P +V + + P T+ Sbjct 217 DAILEHLP------KQRQTMLFSAT-QTKKVSDLARLSLKEPEYVAVHEAASSATPTTLQ 269 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V L E+L I+ Sbjct 270 QHYCVVP-----LPEKLN-----------------------------------TLFGFIR 289 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + + I+F + + + G + LHG +K R +F Sbjct 290 ANLKAKIIVFMSSGKQVRFVYESLRHLQPG-------IPLLHLHGRQKQTARLDITSKFS 342 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 + TDV ARG+D V +VI + P++ Y+HR+GR R ++G A+ + Sbjct 343 SSKNSCIFATDVVARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYGKVGRAVLFLDPS 402 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 +E+ + ++ + I N++Q Sbjct 403 EEEGMLKRLEHKKVPIQKINIRPNKTQDI-KNQLQ 436 Score = 92.1 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 60/121 (50%), Gaps = 8/121 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FSE+ + + +E + TD+Q++++PL L G D+L AA+TGSGKT AF +PV Sbjct 48 IKNFSELPLSGPTSSGLEASHFKTLTDVQSKAVPLALKGKDILGAAKTGSGKTLAFLVPV 107 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVK 117 ++ +Y Q+ + S + + ++ + + S GL R ++ Sbjct 108 LENLYR-----QKWTELDGLGALIISPTRELAIQIFEVLRKIGRYHTFSAGLIIGGRSLQ 162 Query 118 E 118 E Sbjct 163 E 163 >sp|Q966L9|GLH2_CAEEL ATP-dependent RNA helicase glh-2 OS=Caenorhabditis elegans OX=6239 GN=glh-2 PE=1 SV=1 Length=974 Score = 277 bits (708), Expect = 2e-79, Method: Composition-based stats. Identities = 93/425 (22%), Positives = 158/425 (37%), Gaps = 59/425 (14%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 K + L + ++ + ++ L +A ++ G Sbjct 551 CKTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPL--------IHQGHDIMACAQTGSGK 602 Query 266 IVKSQHSGNAQVTQTKFLPNA------PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 A++ L A P+ +I+ P+REL +Q N ++F Y ++R Sbjct 603 TAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA-YQTMMEIR 661 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-Q 378 + GG+A +E G I+VGT GR+ G + L + RF VLDEAD ++ Sbjct 662 P--VYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAM 719 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVDLKGEDSV 437 G+ I+ + N + + Q ++ SAT V++ + + + + + Sbjct 720 GFGTDIDTIVNY--ESMPKKENRQTLMFSATFPD-SVQEAARNHLKEGYIMLAIDKIGAA 776 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 V + + + E + I Y Sbjct 777 NKCVLQEFEKCDRSEKK----------------------------DKLLEILGIDIDSYT 808 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 E + I+F + D L Q + +HG R+ ER + Sbjct 809 TEKNSEVYTKKTIVFVSQRAMADTLASIL---------SSAQVPAITIHGAREQRERSEA 859 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 L +F+ G LI T VA RG+DI GV +VIN +PD +Y+HRIGR GR G A S Sbjct 860 LRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRATS 919 Query 618 LVATE 622 ++ + Sbjct 920 FISED 924 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 0/102 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FSE + + + V + T IQ ++PLI G D++ A+TGSGKT AF +P++ Sbjct 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + G+ G + + Y+ G FA Sbjct 612 ARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFA 653 >sp|Q0UR48|HAS1_PHANO ATP-dependent RNA helicase HAS1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=HAS1 PE=3 SV=1 Length=610 Score = 269 bits (688), Expect = 2e-79, Method: Composition-based stats. Identities = 87/456 (19%), Positives = 160/456 (35%), Gaps = 74/456 (16%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L L+ +K ++ + + +K G + Sbjct 136 LNLSERTMEAIKTMGFESMTEIQRKAIPPLLS--------GKDVLGAAKTGSGKTLAFLI 187 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ +F P N ++V P+RELA Q ++ + ++IGG R Sbjct 188 PAIEMLSSMRFKPRNGTGVIVVSPTRELALQIFGVARELMEKHSQT---FGIVIGGANRR 244 Query 331 DQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 + L GV++++ TPGRL D + +T ++ L++DEAD +L G+ D + + Sbjct 245 AEAEKLAKGVNLLIATPGRLLDHLHNTQGFVFKNLKSLIIDEADRILEVGFEDEMRSIIK 304 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLK--GEDSVPDTVHHVVV 446 +P Q ++ SAT + V+ L+ + P ++++ E S + + V Sbjct 305 ILPT------DRQTMLFSAT-QTTKVEDLARISLKAGPLYINVDYRKEHSTVEGLEQGYV 357 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + T + +K+H+ Sbjct 358 ICDSDT----------------------------------------RFRLLFSFLKKHQK 377 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I+F + + + LHG K R F Sbjct 378 KKVIVFFSSCNSVKFYAELL---------NYIDLPVLELHGKLKQQARTNRFFEFCNAQS 428 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATEKEK 625 LICTDVAARG+DI V +VI PD+ ++Y+HR+GR R G ++ + E Sbjct 429 GTLICTDVAARGLDIPEVDWVIQFDPPDDPRDYIHRVGRTARGSEGKGRSLMFLLPS-EI 487 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 + + L + I L+++ Sbjct 488 GFLKLLKEARVPLVEFELPANKILNIQSQLEALITK 523 Score = 108 bits (270), Expect = 3e-23, Method: Composition-based stats. Identities = 30/95 (32%), Positives = 48/95 (51%), Gaps = 5/95 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E+ + +A++ M + T+IQ ++IP +L G DVL AA+TGSGKT AF IP I Sbjct 131 TRFDELNLSERTMEAIKTMGFESMTEIQRKAIPPLLSGKDVLGAAKTGSGKTLAFLIPAI 190 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +++ + G T S + + + Sbjct 191 EMLSSMRFKPRNG-----TGVIVVSPTRELALQIF 220 >sp|Q9NR30|DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo sapiens OX=9606 GN=DDX21 PE=1 SV=5 Length=783 Score = 273 bits (698), Expect = 2e-79, Method: Composition-based stats. Identities = 115/491 (23%), Positives = 189/491 (38%), Gaps = 83/491 (17%) Query 211 DLGLAFEIPPHMKNQAL--FPAC-----VLKNAELKFNFGEEEFKF---PPKDGFVALSK 260 + + EIP K A FP +LK + F F + F +A ++ Sbjct 172 NSEIEQEIPVEQKEGAFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQAR 231 Query 261 APDGYIVKSQHSGNAQV---TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 G ++ Q + AP+ L++ P+RELA Q + K K Sbjct 232 TGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAPTRELANQVSKDFSDITK-----K 286 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 L GG Q + NG+DI+VGTPGR+ D + GKL+L++++ +VLDE D +L Sbjct 287 LSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLD 346 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVDLKGEDS 436 G++D + + + + Q ++ SAT + V +++K M VDL G+ + Sbjct 347 MGFADQVEEILS-VAYKKDSEDNPQTLLFSATCPHW-VFNVAKKYMKSTYEQVDLIGKKT 404 Query 437 --VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 TV H+ + + W++ ++ Sbjct 405 QKTAITVEHLAIKCH-----------------------------------WTQRAAVIGD 429 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 V + + + IIFC TK + L Q + LHGD +R Sbjct 430 VIRVYSGHQ---GRTIIFCETKKEAQELSQ----------NSAIKQDAQSLHGDIPQKQR 476 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 + L+ F+ G L+ T+VAARG+DI V VI + P + ++Y+HR GR GRA R G+ Sbjct 477 EITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGV 536 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 I ++E V G + I+ I ++ Sbjct 537 CICFYQHKEEYQLVQVEQKAGIKFKRIGVPSATEI------------IKASSKDAIRLLD 584 Query 675 PDIKVPVDEFD 685 + F Sbjct 585 SVPPTAISHFK 595 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 44/90 (49%), Gaps = 3/90 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AFS + E + ++ IQA++ + G D++ A TG+GKT +F+IP+I+ Sbjct 187 AFSNFPISEETIKLLKGRGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIE 246 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQ 92 ++ + Q+ K+G+ + + Sbjct 247 KLH---GELQDRKRGRAPQVLVLAPTRELA 273 >sp|Q4P5U4|DBP4_USTMA ATP-dependent RNA helicase DBP4 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP4 PE=3 SV=2 Length=916 Score = 276 bits (705), Expect = 2e-79, Method: Composition-based stats. Identities = 99/466 (21%), Positives = 179/466 (38%), Gaps = 72/466 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K L L+ +K ++ L + + ++ G Sbjct 58 KQFTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSL--------KGKDVLGAARTGSGKT 109 Query 267 VKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + + + K+ P + AL++ P+RELA Q +++ Y L+IG Sbjct 110 LAFLIPVLEILYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSY---HTFSAGLVIG 166 Query 326 GVAARDQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G + + L ++I++ TPGRL + T + S V+ LVLDEAD +L G+S + Sbjct 167 GKDVKQEKDRLSR-INILIATPGRLLQHMDQTLGFDTSNVQVLVLDEADRILDMGFSRTL 225 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL---KGEDSVPDTV 441 N + +P + Q ++ SAT + VK L+ + P +V + + E P + Sbjct 226 NAIVENLP------RNRQTMLFSAT-QTKRVKDLARLSLQDPEYVAVREPENEGCTPRGL 278 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V + K + I Sbjct 279 EQHYMLVELEK----------------------------------------KLDLLFSFI 298 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + H +A++F + + + F + G S + LHG +K +R Q +F Sbjct 299 RTHTKCKALVFMSSCRQVQFVHETFCKLRPG-------VSLMALHGKQKQAKRLQIFTQF 351 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 K L TD+AARG+D V +VI + +P++ Y+HR+GR R G ++ V Sbjct 352 TKTQHALLFATDIAARGLDFPAVDWVIQLDVPEDVDTYIHRVGRTARYTAKGNSLLFVLP 411 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 +EK +++ + KE +I N++Q + E + Sbjct 412 SEEKGILEALATKNIAIGRIKPKESKTQSI-QNQLQAFAFQEPQIK 456 Score = 94.4 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 35/121 (29%), Positives = 60/121 (50%), Gaps = 8/121 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+++ + + ++ + TDIQA+S+ L L G DVL AA TGSGKT AF IPV Sbjct 57 LKQFTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPV 116 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVK 117 ++I+Y +G S + + ++ + ++ S GL ++VK Sbjct 117 LEILYRRKWGPSDG-----LGALVISPTRELAIQIFEVLRKIGSYHTFSAGLVIGGKDVK 171 Query 118 E 118 + Sbjct 172 Q 172 >sp|A4R8B5|HAS1_PYRO7 ATP-dependent RNA helicase HAS1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=HAS1 PE=3 SV=2 Length=587 Score = 268 bits (685), Expect = 2e-79, Method: Composition-based stats. Identities = 82/393 (21%), Positives = 147/393 (37%), Gaps = 64/393 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 + +K G + + KF P N ++V P+RELA Q Sbjct 144 PPLLAGKDVLGAAKTGSGKTLAFLIPAVEMLRSLKFKPRNGTGVIVVSPTRELALQIFGV 203 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 + K+ ++IGG R + L GV++++ TPGRL D + +R Sbjct 204 ARDLMKHHSQTY---GIVIGGANRRAEAEKLSKGVNLLIATPGRLLDHLQNTPFVFKNLR 260 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH- 424 LV+DEAD +L G+ D + ++ +P K Q ++ SAT + V+ L+ + Sbjct 261 SLVIDEADRILEIGFEDEMRQIIKILP------KERQSMLFSAT-QTTKVEDLARVSLRP 313 Query 425 FPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 P ++++ E S + + V Sbjct 314 GPLYLNVDEEKEYSTVEGLEQGYVVCEADK------------------------------ 343 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 + +++ K + I+F + + Sbjct 344 ----------RFILLFSFLQKMKKKKIIVFFSSCNSVKYYAELLNYIDCQ---------V 384 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 + LHG +K +R F D LICTDVAARG+DI V +++ PD+ ++Y+HR Sbjct 385 LDLHGKQKQQKRTNTFFEFCNADRGTLICTDVAARGLDIPAVDWIVQFDPPDDPRDYIHR 444 Query 603 IGRVGRA-ERMGLAISLVATEKEKVWYHVCSSR 634 +GR R + G ++ + + ++ +R Sbjct 445 VGRTARGTNKKGRSLMFLLPSEVGFLTYLKQAR 477 Score = 107 bits (267), Expect = 5e-23, Method: Composition-based stats. Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 5/94 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AFSE+ + +A+EEM + T+IQ IP +L G DVL AA+TGSGKT AF IP ++ Sbjct 113 AFSELNLSENTMKAIEEMGFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAVE 172 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 ++ + G T S + + + Sbjct 173 MLRSLKFKPRNG-----TGVIVVSPTRELALQIF 201 >sp|P0CQ84|HAS1_CRYNJ ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=HAS1 PE=3 SV=1 Length=607 Score = 268 bits (684), Expect = 5e-79, Method: Composition-based stats. Identities = 80/420 (19%), Positives = 153/420 (36%), Gaps = 64/420 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 + ++ G + ++ +F P N +I+ P+RELA Q Sbjct 161 PPLLAGKDVLGAARTGSGKTMAFLIPSVELLSTLRFKPVNGTGVIIISPTRELALQIFGV 220 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQV 364 K+ + +++GG + + L GV+++V TPGRL D + +T + Sbjct 221 AKELMQGHSQT---FGVLMGGANRKAEADKLVKGVNLIVATPGRLLDHLQNTKGFVFKNL 277 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 + LV+DEAD +L G+ + + ++ +P + Q ++ SAT + V L+ + Sbjct 278 KALVIDEADRILEIGFEEEMKQIIKLLP-----SENRQSMLFSAT-QTTKVTDLARISLR 331 Query 425 -FPTWVDLK--GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 P ++++ E S D + V Sbjct 332 PGPLYINVDETKEASTADMLEQGYVVCESDQ----------------------------- 362 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + +K++ + I+F + + Sbjct 363 -----------RFMLLFTFLKKNLKKKVIVFFSSCNSVKYHAELL---------NYIDVP 402 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 + LHG +K +R F L+CTDVAARG+DI V ++I PD+ ++Y+H Sbjct 403 VLDLHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIH 462 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R+GR RA + G ++ + E + + + + L+S+ Sbjct 463 RVGRTARAGKSGKSLLFLLPS-ELGFLRFLKVAKVPLNEYQFPQKKVADVQKQLESLISK 521 Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P A+E M + T++QA +IP +L G DVL AA TGSGKT AF IP +++ Sbjct 131 FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVEL 190 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + G T S + + + Sbjct 191 LSTLRFKPVNG-----TGVIIISPTRELALQIF 218 >sp|P0CQ85|HAS1_CRYNB ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=HAS1 PE=3 SV=1 Length=607 Score = 268 bits (684), Expect = 5e-79, Method: Composition-based stats. Identities = 80/420 (19%), Positives = 153/420 (36%), Gaps = 64/420 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 + ++ G + ++ +F P N +I+ P+RELA Q Sbjct 161 PPLLAGKDVLGAARTGSGKTMAFLIPSVELLSTLRFKPVNGTGVIIISPTRELALQIFGV 220 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQV 364 K+ + +++GG + + L GV+++V TPGRL D + +T + Sbjct 221 AKELMQGHSQT---FGVLMGGANRKAEADKLVKGVNLIVATPGRLLDHLQNTKGFVFKNL 277 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 + LV+DEAD +L G+ + + ++ +P + Q ++ SAT + V L+ + Sbjct 278 KALVIDEADRILEIGFEEEMKQIIKLLP-----SENRQSMLFSAT-QTTKVTDLARISLR 331 Query 425 -FPTWVDLK--GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 P ++++ E S D + V Sbjct 332 PGPLYINVDETKEASTADMLEQGYVVCESDQ----------------------------- 362 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + +K++ + I+F + + Sbjct 363 -----------RFMLLFTFLKKNLKKKVIVFFSSCNSVKYHAELL---------NYIDVP 402 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 + LHG +K +R F L+CTDVAARG+DI V ++I PD+ ++Y+H Sbjct 403 VLDLHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGLDIPKVDWIIQFDPPDDPRDYIH 462 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R+GR RA + G ++ + E + + + + L+S+ Sbjct 463 RVGRTARAGKSGKSLLFLLPS-ELGFLRFLKVAKVPLNEYQFPQKKVADVQKQLESLISK 521 Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P A+E M + T++QA +IP +L G DVL AA TGSGKT AF IP +++ Sbjct 131 FSTLNLSPPTTAAIERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVEL 190 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + G T S + + + Sbjct 191 LSTLRFKPVNG-----TGVIIISPTRELALQIF 218 >sp|Q6CXW0|DBP8_KLULA ATP-dependent RNA helicase DBP8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP8 PE=3 SV=1 Length=435 Score = 263 bits (671), Expect = 5e-79, Method: Composition-based stats. Identities = 90/434 (21%), Positives = 166/434 (38%), Gaps = 62/434 (14%) Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 K+ +T+ P +++ P+RELA Q +QF + +R +++GG Sbjct 54 KTIAFAAPMLTKWSEDPQGMFGIVLTPTRELAMQI---AEQFTAFGSAMNIRVAIVVGGE 110 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDF 383 + Q L+ ++ TPGRL V + L +V+FLVLDEAD LL++ +S Sbjct 111 SIVQQAIELQKRPHFIIATPGRLAHHVLNSGEDTIGGLKRVKFLVLDEADILLTETFSKD 170 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 + + +P + Q ++ +AT+ VK LS+ Sbjct 171 LATCVSILP----PKNKRQNLLFTATMTDQ-VKALSDA---------------------- 203 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + GK + T +V + DN + + +K Y + + Sbjct 204 ------------PQTEGKPPVFTFEVESVDNVAIPKTLETTYLLVPEHVKESYLYQILTS 251 Query 504 HKM--DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K IIF + + L + K LH ER +++RF Sbjct 252 EKYVKSSCIIFVNRTVTAEILRRTL---------KSLDVRVTSLHSQMPQQERTNSVQRF 302 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + R LI TDVA+RG+DI V V+N +P ++HR GR RA R G ++ V Sbjct 303 RAQAARVLIATDVASRGLDIPIVELVVNYDIPGNPDTFIHRAGRTARAGRHGESLCFVTE 362 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 + + + K +++E + L+++ ++ ++ + Sbjct 363 KDIQRVEAIEERINK-----KMEEFTDVGDTAVIRKSLTKVTAAKRESLMAMDKEGFGER 417 Query 682 DEFDGKVTYGQKRA 695 + + +++ Sbjct 418 RKLQKRKNESKEKT 431 Score = 100 bits (249), Expect = 3e-21, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 20/157 (13%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F +G + +A+ M + PT IQ IP IL G D + A TGSGKT AF+ P++ Sbjct 4 SEFKSLGCSKWLVEALNAMKIVQPTAIQKACIPEILKGRDCIGGANTGSGKTIAFAAPML 63 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA----------IGSDGLCC 111 E + + + M ++ +AF +G + + Sbjct 64 TKWSE---------DPQGMFGIVLTPTRELAMQIAEQFTAFGSAMNIRVAIVVGGESIVQ 114 Query 112 QSREV-KEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 Q+ E+ K H AT G + GL RV Sbjct 115 QAIELQKRPHFIIATPGRLAHHVLNSGEDTIGGLKRV 151 >sp|P25808|SPB4_YEAST ATP-dependent rRNA helicase SPB4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SPB4 PE=1 SV=1 Length=606 Score = 268 bits (684), Expect = 5e-79, Method: Composition-based stats. Identities = 93/463 (20%), Positives = 172/463 (37%), Gaps = 63/463 (14%) Query 206 SKNGKDLGLAFEIPP----HMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA 261 SK+ + L F + P + ++ + + G ++ G S Sbjct 2 SKSLEWDNLGFSLLPWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTG----SGK 57 Query 262 PDGYIVKSQHSG-NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY--IDNPKL 318 +++ + +KF +LI+ P+REL+ Q + + F ++ D + Sbjct 58 TAAFVIPVLEKVVKEEANTSKFKKAHFHSLIIAPTRELSRQIESVVLSFLEHYPSDLFPI 117 Query 319 RELLIIG---GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGL 375 + L++G D + L N I++GTPGR+ D + + S +V+DEAD L Sbjct 118 KCQLLVGTNEATVRDDVSNFLRNRPQILIGTPGRVLDFLQMPAVKTSACSMVVMDEADRL 177 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L + ++ +P K+ + + SAT+ S + + + P + + ++ Sbjct 178 LDMSFIKDTEKILRLLP------KQRRTGLFSATMRSAG-SDIFKTGLRNPVRITVNSKN 230 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 P ++ VNP K + Sbjct 231 QAPSSLKLNYCVVNPAE----------------------------------------KLQ 250 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 V + +K + I++ T + + G + ++ LHG + R Sbjct 251 LLVSILNNYKFKKCIVYFPTCVSVSYFYSFIQYLG-KRNILVNEVEIFSLHGKLQTSART 309 Query 556 QNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 + L F L TDVAARGIDI V VI + P ++HR GR GRA R+G Sbjct 310 KTLTAFTDSLSNSVLFTTDVAARGIDIPDVDLVIQLDPPTNTDMFMHRCGRTGRANRVGK 369 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 AI+ + +E+ + + L+ G T +Y + + Sbjct 370 AITFLNEGREEDFIPFMQVKNVELEELDLEVKGITTNFYEDFR 412 Score = 86.3 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 28/101 (28%), Positives = 47/101 (47%), Gaps = 3/101 (3%) Query 4 FSEMGVM--PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + +G P I ++ M + T +QA +IP++ G DV++ + TGSGKT AF IPV+ Sbjct 7 WDNLGFSLLPWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVL 66 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + V + + + KK A + +F Sbjct 67 EKVVKEEANTSKFKKAHFHSLIIA-PTRELSRQIESVVLSF 106 >sp|A7A237|SPB4_YEAS7 ATP-dependent rRNA helicase SPB4 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=SPB4 PE=3 SV=1 Length=606 Score = 268 bits (684), Expect = 5e-79, Method: Composition-based stats. Identities = 93/463 (20%), Positives = 172/463 (37%), Gaps = 63/463 (14%) Query 206 SKNGKDLGLAFEIPP----HMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA 261 SK+ + L F + P + ++ + + G ++ G S Sbjct 2 SKSLEWDNLGFSLLPWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTG----SGK 57 Query 262 PDGYIVKSQHSG-NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY--IDNPKL 318 +++ + +KF +LI+ P+REL+ Q + + F ++ D + Sbjct 58 TAAFVIPVLEKVVKEEANTSKFKKAHFHSLIIAPTRELSRQIESVVLSFLEHYPSDLFPI 117 Query 319 RELLIIG---GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGL 375 + L++G D + L N I++GTPGR+ D + + S +V+DEAD L Sbjct 118 KCQLLVGTNEATVRDDVSNFLRNRPQILIGTPGRVLDFLQMPAVKTSACSMVVMDEADRL 177 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L + ++ +P K+ + + SAT+ S + + + P + + ++ Sbjct 178 LDMSFIKDTEKILRLLP------KQRRTGLFSATMRSAG-SDIFKTGLRNPVRITVNSKN 230 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 P ++ VNP K + Sbjct 231 QAPSSLKLNYCVVNPAE----------------------------------------KLQ 250 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 V + +K + I++ T + + G + ++ LHG + R Sbjct 251 LLVSILNNYKFKKCIVYFPTCVSVSYFYSFIQYLG-KRNILVNEVEIFSLHGKLQTSART 309 Query 556 QNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 + L F L TDVAARGIDI V VI + P ++HR GR GRA R+G Sbjct 310 KTLTAFTDSLSNSVLFTTDVAARGIDIPDVDLVIQLDPPTNTDMFMHRCGRTGRANRVGK 369 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 AI+ + +E+ + + L+ G T +Y + + Sbjct 370 AITFLNEGREEDFIPFMQVKNVELEELDLEVKGITTNFYEDFR 412 Score = 86.3 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 28/101 (28%), Positives = 47/101 (47%), Gaps = 3/101 (3%) Query 4 FSEMGVM--PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + +G P I ++ M + T +QA +IP++ G DV++ + TGSGKT AF IPV+ Sbjct 7 WDNLGFSLLPWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVL 66 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + V + + + KK A + +F Sbjct 67 EKVVKEEANTSKFKKAHFHSLIIA-PTRELSRQIESVVLSF 106 >sp|P0CR03|DBP8_CRYNB ATP-dependent RNA helicase DBP8 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP8 PE=3 SV=1 Length=619 Score = 268 bits (685), Expect = 6e-79, Method: Composition-based stats. Identities = 96/441 (22%), Positives = 165/441 (37%), Gaps = 35/441 (8%) Query 223 KNQALFPACVLKNAELKF--NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQT 280 F + L + + ++ + D SG Sbjct 149 SADVTFESLGLSRPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFAL 208 Query 281 KFL------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 + P A+++ P+RELA Q K + L I+GG+ Q Sbjct 209 PIVERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGKPLG---LTTATIVGGMDMMKQAQ 265 Query 335 VLENGVDIVVGTPGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 LE I+V TPGRL DL+ +G + LS+VR LVLDEAD +L+ ++ + + +QI Sbjct 266 ELEARPHIIVATPGRLCDLLRSGGVGPGKLSRVRTLVLDEADRMLTPSFAPELAYLFSQI 325 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEK----IMHFPTWVDLKGEDSVPDTVHHVVVP 447 P + Q + +AT+ S + +L+ K P + + + + Sbjct 326 PA------KRQTCLFTATV-SEAIMELANKEPPAGKQRPFVYRVASDTLTVSNLKQKYLF 378 Query 448 VNPKT-DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + + D + ++ + DV + + + + K K + A + Sbjct 379 IPSQIRDPYLLYILQNPLEDIDVALRVDPKKAKAREREAALGKKGKKPKQAKEEEDAPSV 438 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +IF + V LH +R +L RF+ +V Sbjct 439 PSTVIFTQRCATA---------HLLHLLLNSLDIPSVPLHSHLTQPQRLLSLARFRAHEV 489 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 L+ TDV +RG+DI V VIN P +YVHR+GR RA R G+A++++ ++ Sbjct 490 PVLVTTDVGSRGLDIPEVAMVINWDCPRRSDDYVHRVGRTARAGRGGVAVTIITERDTEL 549 Query 627 WYHVCSSRGKGCYNTRLKEDG 647 + +L ED Sbjct 550 VKIIEDEVNVRLEELKLDEDK 570 Score = 92.9 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 22/96 (23%), Positives = 43/96 (45%), Gaps = 9/96 (9%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F +G+ + A+ ++ PT+IQA + IL G D + A+TGSGKT AF++P+++ Sbjct 153 TFESLGLSRPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVE 212 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDR 98 + + + + ++ Sbjct 213 RI---------ARDPFGVWAVVLTPTRELAYQLSEQ 239 >sp|Q3ZBV2|DD19A_BOVIN ATP-dependent RNA helicase DDX19A OS=Bos taurus OX=9913 GN=DDX19A PE=2 SV=1 Length=478 Score = 264 bits (674), Expect = 6e-79, Method: Composition-based stats. Identities = 110/467 (24%), Positives = 187/467 (40%), Gaps = 109/467 (23%) Query 228 FPACVLKNAELKFNFG---EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQV 277 F LK L+ + K + L++ P I +SQ A + Sbjct 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 ++ + P+ L + P+ ELA QT I+Q K+ +P+L+ + G + E Sbjct 153 SRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKF--HPELKLAYAVRGNKLERGQKISE 210 Query 338 NGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVT 395 IV+GTPG + D S ++ +++ VLDEAD ++ +QG+ D R+ +P Sbjct 211 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP--- 264 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + Q+++ SAT V K ++K++ P + LK E+ DT+ V N + + Sbjct 265 ---RNCQMLLFSATFED-SVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDE-- 318 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 K + + QA+IFC T Sbjct 319 -------------------------------------KFQALCNIYGAITIAQAMIFCHT 341 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + L ++G L G+ +R +ERF++G + L+ T+V Sbjct 342 RKTASWLAAELSKEG---------HQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVC 392 Query 576 ARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 ARGID+ V VIN LP + + Y+HRIGR GR + GLA+++V ++ Sbjct 393 ARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK------- 445 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 + M +L+ I+EH N I +++ D Sbjct 446 ------------------------HSMNILNRIQEHFNKKIERLDTD 468 Score = 87.1 bits (214), Expect = 1e-16, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 60/149 (40%), Gaps = 3/149 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+ + P++ Q V M + P+ IQ ++P++L +++ +++G+GKT AF + Sbjct 90 VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V + Q T + QM + A G + + Sbjct 150 AMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKIS 209 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 H T G + ++ D +V Sbjct 210 EHIVIGTPGTVLD-WCSKLKFIDPKKIKV 237 >sp|Q9DBN9|DDX59_MOUSE Probable ATP-dependent RNA helicase DDX59 OS=Mus musculus OX=10090 GN=Ddx59 PE=1 SV=1 Length=619 Score = 268 bits (684), Expect = 7e-79, Method: Composition-based stats. Identities = 94/456 (21%), Positives = 187/456 (41%), Gaps = 70/456 (15%) Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEE 245 + H I + + + ++ K + LG++ + + F C L N + Sbjct 168 YKEHPFI---VTLKEDQIETLK--QQLGISVQGQDVARPIIDFEHCGFPE-TLNQNLKKS 221 Query 246 EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP---------NAPKALIVEPSR 296 ++ P + G + + + T LP P ALI+ P+R Sbjct 222 GYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRAFSEDKTPSALILTPTR 281 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 ELA Q K+ + P+++ +L++GG+ QL L V +++ TPGRL D++ Sbjct 282 ELAIQIERQAKELMSGL--PRMKTVLLVGGLPLPPQLYRLRQHVKVIIATPGRLLDIIKQ 339 Query 357 GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVK 416 ++LS ++ +V+DEAD +L G+ + + P Q I+ SAT+ ++ Sbjct 340 SSVSLSGIKIVVVDEADTMLKMGFQQQVLDVLEHTPG------DCQTILVSATIPD-SIE 392 Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L+++++H P + ++ +V +++ V Sbjct 393 QLTDQLLHNPVRIITGDKNLPCASVRQIILWVE--------------------------- 425 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 P + +IL + + ++F K+ D L + +K Sbjct 426 ----DPAKKKKLFEILNDQKLFK-------PPVLVFVDCKLGADLLSE--------AVQK 466 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 + +H ++ ER+ L+ +GD ++ T V RG+D+ V V+N +P Sbjct 467 ITGLNSTSIHSEKSQVERRDILKGLLEGDYEVVVSTGVLGRGLDLVNVKLVVNFDMPSSM 526 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 YVH++GRVGR + G AI+ + +++++ V Sbjct 527 DEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDVAK 562 Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 9/106 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F G + Q +++ + +PT IQ + IP+ L G D+L +A+TGSGKT AF +PVI Sbjct 205 FEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIR 264 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + K T + + + + G + Sbjct 265 AFSEDK---------TPSALILTPTRELAIQIERQAKELMSGLPRM 301 >sp|Q86TM3|DDX53_HUMAN Probable ATP-dependent RNA helicase DDX53 OS=Homo sapiens OX=9606 GN=DDX53 PE=1 SV=3 Length=631 Score = 268 bits (685), Expect = 8e-79, Method: Composition-based stats. Identities = 91/404 (23%), Positives = 159/404 (39%), Gaps = 65/404 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ---TKFLPNAPKALIVEPSRELAEQTL 303 + +++ G + G + ++ N P L++ P+RELA Sbjct 254 PIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELAL--- 310 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 + + KY L+ + I GG Q+ + GVDI++ TPGRL+DL +NL Sbjct 311 HVEAECSKY-SYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQMNNSVNLRS 369 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 + +LV+DEAD +L + I ++ Q ++ SAT V++L+ + Sbjct 370 ITYLVIDEADKMLDMEFEPQIRKIL------LDVRPDRQTVMTSATWPDT-VRQLALSYL 422 Query 424 HFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 P V + +TV ++ K R Sbjct 423 KDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKR---------------------------- 454 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 D+ I+F K D+L F QG S Sbjct 455 -----------ALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQG---------ISA 494 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 LHG+ + ++++ +E FK G+++ LI TD+ +RG+D++ V +V N P YVHR Sbjct 495 ESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHR 554 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 +G +GR + G +++L+ K+ + + N + ED Sbjct 555 VGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRA--NQSVPED 596 Score = 85.2 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 55/109 (50%), Gaps = 6/109 (6%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AF + P++ +++ + + PT IQ+++ P+IL G D+++ A+TG+GKT ++ +P Sbjct 226 AFQQY---PDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFI 282 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + ++ +E + G + + + ++ S ++ C Sbjct 283 HL-DSQPISREQRNGPGML--VLTPTRELALHVEAECSKYSYKGLKSIC 328 >sp|Q9SB89|RH27_ARATH DEAD-box ATP-dependent RNA helicase 27 OS=Arabidopsis thaliana OX=3702 GN=RH27 PE=2 SV=2 Length=633 Score = 268 bits (684), Expect = 9e-79, Method: Composition-based stats. Identities = 91/464 (20%), Positives = 177/464 (38%), Gaps = 72/464 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 + +K + L L+ +K ++ + E+ + ++ Sbjct 150 IMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGED--------VLGAARTG 201 Query 263 DGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 G + + + KF P N L++ P+RELA Q+ K+ KY Sbjct 202 SGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYHSQT---VG 258 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGY 380 +IGG + + +L GV+++V TPGRL D + +T ++FLV+DEAD +L Q + Sbjct 259 KVIGGEKRKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNF 318 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVP 438 + + ++ N +P K Q + SAT S V+ L+ + P ++D+ ++ Sbjct 319 EEDLKKILNLLP------KTRQTSLFSAT-QSAKVEDLARVSLTSPVYIDVDEGRKEVTN 371 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 + + V L+ Sbjct 372 EGLEQGYCVVPSAMRLLF---------------------------------------LLT 392 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + + ++F T + F + +F C+ + G ++R Sbjct 393 FLKRFQGKKKIMVFFSTCKSTKFHAELF---------RYIKFDCLEIRGGIDQNKRTPTF 443 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA-ERMGLAIS 617 +F K + L+CT+VAARG+D V +++ PD +Y+HR+GR R G A+ Sbjct 444 LQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALL 503 Query 618 LVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 ++ ++ K ++ +++ +E + L+SE Sbjct 504 VLTPQELKFIQYLKAAKI-PVEEHEFEEKKLLDVKPFVENLISE 546 Score = 98.3 bits (243), Expect = 7e-20, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 52/119 (44%), Gaps = 8/119 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + ++++EM + T IQA++IP ++ G DVL AA TGSGKT AF IP + Sbjct 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 213 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY---DRGSAFAIGSDGLCCQSREVK 117 +++Y + G T + + Y + + G + K Sbjct 214 ELLYRVKFTPRNG-----TGVLVICPTRELAIQSYGVAKELLKYHSQTVGKVIGGEKRK 267 >sp|Q8K363|DDX18_MOUSE ATP-dependent RNA helicase DDX18 OS=Mus musculus OX=10090 GN=Ddx18 PE=1 SV=1 Length=660 Score = 268 bits (686), Expect = 9e-79, Method: Composition-based stats. Identities = 97/511 (19%), Positives = 188/511 (37%), Gaps = 68/511 (13%) Query 209 GKDLGLAFEIPPHMKNQALFPACV-LKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 G +F ++ N+ A + + + +A +K G + Sbjct 162 GAFEDTSFASLSNLVNENTLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTL 221 Query 268 KSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + + KF+P N LI+ P+RELA QT +K+ + + LI+GG Sbjct 222 AFLIPVIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTY---GLIMGG 278 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 ++ L NG++I+V TPGRL D + +T ++ LV+DEAD +L G+ + + Sbjct 279 SNRSAEVQKLLNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELK 338 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVDLKGEDS--VPDTVH 442 ++ +P R Q ++ SAT + V+ L+ + P +V + + D + Sbjct 339 QIIKLLPA------RRQTMLFSAT-QTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLE 391 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + + +K Sbjct 392 QGYVVCPSEK----------------------------------------RFLLLFTFLK 411 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +++ + ++F + + + + +HG +K ++R +F Sbjct 412 KNRKKKVMVFFSSCMSVKYHYELL---------NYIDLPVLAIHGKQKQNKRTTTFFQFC 462 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA-ERMGLAISLVAT 621 D L+CTDVAARG+DI V +++ PD+ + Y+HR+GR R G A+ ++ Sbjct 463 NADSGILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRP 522 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 E+ ++ S+ N + ++++ L E L+ + + Sbjct 523 EELGFLRYLKQSKVP--LNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAY 580 Query 682 DEFDGKVTYGQKRAAGGGSYKGHVDILAPTV 712 D K + + P V Sbjct 581 DSHSLKQIFNVNNLNLPQVALSFGFKVPPFV 611 Score = 95.6 bits (236), Expect = 4e-19, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 51/97 (53%), Gaps = 7/97 (7%) Query 2 AAFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 +F+ + V +A+EEM + T+IQ +SI +L G D+L AA+TGSGKT AF IP Sbjct 167 TSFASLSNLVNENTLKAIEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIP 226 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 VI+++ + + G T S + M + Sbjct 227 VIELIVKLKFMPRNG-----TGVLILSPTRELAMQTF 258 >sp|Q1E0Z3|DBP8_COCIM ATP-dependent RNA helicase DBP8 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP8 PE=3 SV=1 Length=536 Score = 265 bits (677), Expect = 1e-78, Method: Composition-based stats. Identities = 104/461 (23%), Positives = 168/461 (36%), Gaps = 77/461 (17%) Query 190 DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKF 249 D + G + LGLA + + A+ ++ A + + Sbjct 89 DPVTAKDAFAMGLQSMDSSFSSLGLAPWLVGSLSAMAIRRPTAIQRACIP--------EI 140 Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 + S+ G V + ++ F A+++ P+RELA Q +QF Sbjct 141 LKGRDCIGGSRTGSGKTVAFAAPILHRWSEDPF---GIFAVVLTPTRELALQIF---EQF 194 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVR 365 K L+ +LI GG R Q L +V+ TPGRL D + T + L++VR Sbjct 195 KAISAPQSLKPVLITGGSEMRPQAIALSTRPHVVIATPGRLADHIKTSGQDTIYGLNRVR 254 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 +VLDEAD LL+ G + + + + Q ++ +AT+ + +V+ L K M Sbjct 255 MVVLDEADRLLASGPGSMLPDVETCLSALPPSTS-RQTLLFTATV-TQEVRAL--KSMPR 310 Query 426 P--------TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 P T + + ++P T+ + V Sbjct 311 PKDRLPIFVTEISTENNTTIPPTLKQCYLQVP---------------------------- 342 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 + + + + AIIFC + Sbjct 343 ----------MTHREAFLHVLLSTDANSSKPAIIFCNRTKTA---------DLLDRLLRR 383 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 LH ER NL RF+ R L+ TDVAARG+DI V V+N +P Sbjct 384 LGHRVTSLHSLLPQSERTSNLARFRASAARLLVATDVAARGLDIPSVGLVVNFDVPRNPD 443 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 +Y+HR+GR RA R G AI+LV ++ + G+ Sbjct 444 DYIHRVGRTARAGREGEAITLVGQRDVQLVLAIEERVGRQM 484 Score = 100 bits (250), Expect = 6e-21, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (44%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++FS +G+ P + ++ M PT IQ IP IL G D + + TGSGKT AF+ P++ Sbjct 106 SSFSSLGLAPWLVGSLSAMAIRRPTAIQRACIPEILKGRDCIGGSRTGSGKTVAFAAPIL 165 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 E + + + +++ A + Sbjct 166 HRWSE---------DPFGIFAVVLTPTRELALQIFEQFKAISA 199 >sp|Q9FLB0|RH18_ARATH DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana OX=3702 GN=RH18 PE=2 SV=1 Length=593 Score = 266 bits (681), Expect = 1e-78, Method: Composition-based stats. Identities = 93/378 (25%), Positives = 161/378 (43%), Gaps = 46/378 (12%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + T P+ +I+ P+REL+ Q N + F + N + +L++GG + + + Sbjct 80 RSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLAN--VNSVLLVGGREVKADMKI 137 Query 336 LEN-GVDIVVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 +E G ++++GTPGRL D++ + L+ + L+LDEAD LL G+ +N + +++P Sbjct 138 IEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISRLP- 196 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 K+ + + SAT + V++L++ + P V+++ + + Sbjct 197 -----KQRRTGLFSAT-QTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLT--------- 241 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 T G + M EA K K V + ++ + I+F Sbjct 242 ------------------NSKTPSGLHLEYMECEADK--KSSQLVDLLIKNSDKKLIVFF 281 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 T D + S + +HGD K + R + L F K L+CTD Sbjct 282 MTCASVDYWGLVLSKIPAL-----KSISLIPIHGDMKQNARDKALASFTKASSGALLCTD 336 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 VAARG+DI G+ YV+ P + + HR GR R R G AI + ++E + Sbjct 337 VAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVFLLPKEEA-YVEFMRI 395 Query 634 RGKGCYNTRLKEDGGCTI 651 R + ED I Sbjct 396 RRVPLEERKCSEDASDVI 413 Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 34/132 (26%), Positives = 56/132 (42%), Gaps = 9/132 (7%) Query 2 AAFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 FS++ + +I +A+ + D+ T +QA +IPL+ DV + A TGSGKT AF +P Sbjct 14 TRFSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVP 73 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDG----LCCQSRE 115 +++I+ + K + S + Y+ F L RE Sbjct 74 LVEIL---RRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGRE 130 Query 116 VKEWHGCRATKG 127 VK +G Sbjct 131 VKADMKIIEEEG 142 >sp|Q61655|DD19A_MOUSE ATP-dependent RNA helicase DDX19A OS=Mus musculus OX=10090 GN=Ddx19a PE=1 SV=2 Length=478 Score = 263 bits (672), Expect = 1e-78, Method: Composition-based stats. Identities = 113/467 (24%), Positives = 189/467 (40%), Gaps = 109/467 (23%) Query 228 FPACVLKNAELKFNFG---EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQV 277 F LK L+ + K + L++ P I +SQ A + Sbjct 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 ++ + P+ L + P+ ELA QT I+Q K+ +P+L+ + G V E Sbjct 153 SRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKF--HPELKLAYAVRGNKLERGQKVSE 210 Query 338 NGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVT 395 IV+GTPG + D S ++ +++ VLDEAD ++ +QG+ D R+ +P Sbjct 211 ---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP--- 264 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + Q+++ SAT V K ++K++ P + LK E+ DT+ V N + ++ Sbjct 265 ---RNCQMLLFSATFED-SVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKF 320 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + L Y I QA+IFC T Sbjct 321 ----------------------------------QALCNLYGAITIA-----QAMIFCHT 341 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + L ++G L G+ +R +ERF++G + L+ T+V Sbjct 342 RKTASWLAAELSKEG---------HQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVC 392 Query 576 ARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 ARGID+ V VIN LP + + Y+HRIGR GR + GLA+++V ++ Sbjct 393 ARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK------- 445 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 + M +L+ I+EH N I +++ D Sbjct 446 ------------------------HSMNILNRIQEHFNKKIERLDTD 468 Score = 84.4 bits (207), Expect = 8e-16, Method: Composition-based stats. Identities = 27/154 (18%), Positives = 60/154 (39%), Gaps = 19/154 (12%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+ + P++ Q V M + P+ IQ ++P++L +++ +++G+GKT AF + Sbjct 90 VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V + Q S + + + + E+K Sbjct 150 AMLSRVEPADRYPQ---------CLCLSPTYELALQT-------GKVIEQMGKFHPELKL 193 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTM 152 + R K K ++ G + W + Sbjct 194 AYAVRGNKLERGQKVSEQIVIGTPGTV-LDWCSK 226 >sp|Q0UCB9|DBP5_PHANO ATP-dependent RNA helicase DBP5 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP5 PE=3 SV=1 Length=471 Score = 263 bits (671), Expect = 1e-78, Method: Composition-based stats. Identities = 98/466 (21%), Positives = 183/466 (39%), Gaps = 85/466 (18%) Query 220 PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ 279 ++N ++ L +A S++ G + +++ Sbjct 77 KGVRNMNFRKPSKIQEKALPLLLMNPP------TNMIAQSQSGTGKTAAFSLNILSRIDL 130 Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 ++ N P+A+ + PSRELA Q L I ++++ L+ + I R+Q Sbjct 131 SR---NEPQAIALAPSRELARQILGVITHMGQFMEG--LKTMAAIPDPTKRNQRLD---- 181 Query 340 VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDG 398 ++VGTPG + + + + ++ LVLDEAD +L QG D R+ + +P Sbjct 182 AHVLVGTPGTVQEQLKRRLIKSDSIKILVLDEADNMLDQQGMGDQCTRVKSLLP------ 235 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 K +Q ++ SAT V + K + L E+ + + + + ++ D+ Sbjct 236 KNIQTVLFSATFPPA-VINYANKFAPNSNVLTLAHEELTIEGIKQLYIDIDKDQDKYSTL 294 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 L + T +IIF RT+ Sbjct 295 LKFYGLMTQA---------------------------------------SSIIFVRTRRT 315 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 + LE+ + +G L G + +R + +++F+ G+ + LI T+V ARG Sbjct 316 AEELERRMVAEG---------HKVAQLSGALEGQDRDRVIDQFRSGEAKVLITTNVLARG 366 Query 579 IDIHGVPYVINVTLPD-------EKQNYVHRIGRVGRAERMGLAISLVATEKE-KVWYHV 630 ID+ V VIN +P + + Y+HRIGR GR R+G+A++ V + + + + Sbjct 367 IDVESVTMVINYDVPTMADGREADPETYLHRIGRTGRFGRVGVALTFVHDKASWQQLHDI 426 Query 631 CSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 S + T L + W N +++ +I + S E Sbjct 427 AS-----YFKTDLH-PIDTSDWDNVEEMIQKIIKSSRAGKSTKEMT 466 Score = 65.2 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 50/109 (46%), Gaps = 11/109 (10%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPV 60 +F E+ + E+ + V M++ P+ IQ +++PL+L +++ +++G+GKT AFS+ + Sbjct 65 SFEELQLSEELLKGVRNMNFRKPSKIQEKALPLLLMNPPTNMIAQSQSGTGKTAAFSLNI 124 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 + + + + Q + + + +GL Sbjct 125 LSRIDLSRNEPQ---------AIALAPSRELARQILGVITHMGQFMEGL 164 >sp|Q9JIK5|DDX21_MOUSE Nucleolar RNA helicase 2 OS=Mus musculus OX=10090 GN=Ddx21 PE=1 SV=3 Length=851 Score = 272 bits (696), Expect = 1e-78, Method: Composition-based stats. Identities = 103/440 (23%), Positives = 172/440 (39%), Gaps = 73/440 (17%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVT---QTKFLPNAPKALIVEPSRELAEQTLNNIKQ 308 +A ++ G ++ Q + AP+ L++ P+RELA Q + Sbjct 295 GKDLIAQARTGTGKTFSFAIPLIEKLQGGLQERKRGRAPQVLVLAPTRELANQVSKDFSD 354 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLV 368 K KL GG Q+ + +G+DI+VGTPGR+ D + GKL+L++++ +V Sbjct 355 ITK-----KLSVACFYGGTPYGGQIERMRSGIDILVGTPGRIKDHLQNGKLDLTKLKHVV 409 Query 369 LDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PT 427 LDE D +L G++D + + + Q ++ SAT + V +++K M Sbjct 410 LDEVDQMLDMGFADQVEEIL-CVAYKKDSEDNPQTLLFSATCPHW-VFNVAKKYMKSTYE 467 Query 428 WVDLKGEDS--VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 VDL G+ + TV H+ + + W Sbjct 468 QVDLIGKKTQKAAITVEHLAIKCH-----------------------------------W 492 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 +E ++ V + + + IIFC TK D L Q + L Sbjct 493 TERAAVIGDVIRVYSGHQ---GRTIIFCETKKDAQELSQNTCIKQ----------DAQSL 539 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HGD +R+ L+ F+ G+ L+ T+VAARG+DI V V+ P + ++Y+HR GR Sbjct 540 HGDIPQKQREITLKGFRNGNFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGR 599 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 GRA R G+ I ++E V G + I+ Sbjct 600 TGRAGRTGVCICFYQNKEEYQLAQVEQKAGIKFKRIGVPSATEI------------IKAS 647 Query 666 LNCTISQVEPDIKVPVDEFD 685 I ++ + F Sbjct 648 SKDAIRLLDSVPPTAISHFK 667 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 24/90 (27%), Positives = 43/90 (48%), Gaps = 3/90 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 AFS + E + ++ IQA++ + G D++ A TG+GKT +F+IP+I+ Sbjct 259 AFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIE 318 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQ 92 + L QE K+G+ + + Sbjct 319 KLQGGL---QERKRGRAPQVLVLAPTRELA 345 >sp|A7EY76|DBP5_SCLS1 ATP-dependent RNA helicase dbp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp5 PE=3 SV=1 Length=470 Score = 262 bits (670), Expect = 2e-78, Method: Composition-based stats. Identities = 98/462 (21%), Positives = 177/462 (38%), Gaps = 85/462 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + LG+ I + ++ L G +A S++ G Sbjct 71 FEQLGIDASILKGLYAMNFKKPSKIQEKALPLLLGNPP------TNMIAQSQSGTGKTAA 124 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + +++ +K P P+AL + PSRELA Q ++ ++++ L I G Sbjct 125 FVITILSRLDFSK--PTTPQALCLAPSRELARQIEGVVRSIGQFVEG--LSVQAAIPGAV 180 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRM 387 R+ ++VGTPG + DL+ ++ SQ++ L LDEAD +L QG D R+ Sbjct 181 ERN----ARVNAMVIVGTPGTVMDLIKRKSIDASQMKVLCLDEADNMLDQQGLGDQCLRV 236 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + I K Q+++ SAT +V +++ + LK ++ + + + Sbjct 237 KSMI-------KVEQILLFSATFPD-EVYGFAQQFSPRANEIKLKRDELTVSGIKQMFMD 288 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + K E V+ + Sbjct 289 CPNEVG---------------------------------------KYEILVKLYGLMTIG 309 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +IIF + + ++ + +G +HG + ER LE F++G + Sbjct 310 SSIIFVKRRDTASHIAERLTAEG---------HKVAAIHGAFEGAERDTVLEDFRQGKAK 360 Query 568 FLICTDVAARGIDIHGVPYVINVTLP--------DEKQNYVHRIGRVGRAERMGLAISLV 619 LI T+V ARGID+ V VIN +P + + Y+HRIGR GR R+G++IS V Sbjct 361 VLITTNVLARGIDVQSVSMVINYDIPMKGRSDFEPDPETYLHRIGRTGRFGRVGVSISFV 420 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 K + K ++ + ++E + + + Sbjct 421 FDRKSY------DALNKIAHHYNIDLIKLNQDDWDETEEIVK 456 Score = 80.9 bits (198), Expect = 9e-15, Method: Composition-based stats. Identities = 23/116 (20%), Positives = 52/116 (45%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F ++G+ I + + M++ P+ IQ +++PL+LG +++ +++G+GKT AF I Sbjct 68 VDTFEQLGIDASILKGLYAMNFKKPSKIQEKALPLLLGNPPTNMIAQSQSGTGKTAAFVI 127 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 ++ + + K T + + + +GL Q+ Sbjct 128 TILSRL--------DFSKPTTPQALCLAPSRELARQIEGVVRSIGQFVEGLSVQAA 175 >sp|A3LNR6|HAS1_PICST ATP-dependent RNA helicase HAS1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=HAS1 PE=3 SV=2 Length=567 Score = 265 bits (677), Expect = 2e-78, Method: Composition-based stats. Identities = 82/423 (19%), Positives = 156/423 (37%), Gaps = 75/423 (18%) Query 228 FPACVLKNAELKF--NFGEEEFKFPPKDGFVAL---------SKAPDGYIVKSQHSGNAQ 276 F L ++ + G + L +K G + Sbjct 105 FEDAGLSEPTMRAISDMGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEL 164 Query 277 VTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + KF P N ++V P+RELA Q ++ + ++IGG R + Sbjct 165 LYSLKFKPRNGTGVIVVSPTRELALQIFGVARELMAHHTQT---FGIVIGGANRRQEAEK 221 Query 336 LENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L GV++++ TPGRL D + +T ++ LV+DEAD +L G+ + + ++ +P+ Sbjct 222 LAKGVNLLIATPGRLLDHLQNTQGFVFKNLKALVIDEADRILEIGFEEEMKQIIKILPK- 280 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGED--SVPDTVHHVVVPVNPK 451 + Q ++ SAT + V+ L+ + P ++++ E S D + V + Sbjct 281 ----EERQSMLFSAT-QTTKVEDLARISLRPGPLYINVVPETAASTADGLEQGYVVCDSD 335 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + +K++ + I+ Sbjct 336 K----------------------------------------RFLLLFSFLKKYSKKKIIV 355 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F + + + LHG +K +R F L+C Sbjct 356 FLSSCNSVKYFGELL---------NYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLVC 406 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATEKEKVWYHV 630 TDVAARG+DI V ++I PD+ ++Y+HR+GR R G ++ + + ++ Sbjct 407 TDVAARGLDIPAVDWIIQFDPPDDPRDYIHRVGRTARGSNGKGKSLMFLTPSELGFLRYL 466 Query 631 CSS 633 ++ Sbjct 467 KAA 469 Score = 105 bits (263), Expect = 2e-22, Method: Composition-based stats. Identities = 31/93 (33%), Positives = 49/93 (53%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + G+ +A+ +M + T +QA++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 105 FEDAGLSEPTMRAISDMGFKTMTKVQAKTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEL 164 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +Y + G T S + + + Sbjct 165 LYSLKFKPRNG-----TGVIVVSPTRELALQIF 192 >sp|Q9LIH9|RH51_ARATH DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis thaliana OX=3702 GN=RH51 PE=2 SV=1 Length=568 Score = 265 bits (676), Expect = 3e-78, Method: Composition-based stats. Identities = 87/443 (20%), Positives = 166/443 (37%), Gaps = 77/443 (17%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF------------V 256 G+D + + F + L + E F++ + + Sbjct 72 GEDEKNIVIVGKGIMTNVTFDSLDLSE-QTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVL 130 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 ++ G + + + +F P N +++ P+RELA QT N ++ K+ Sbjct 131 GAARTGSGKTLAFLIPAVELLFKERFSPRNGTGVIVICPTRELAIQTKNVAEELLKHHSQ 190 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADG 374 ++IGG R + + +G ++V+ TPGRL D + +T ++ LV+DEAD Sbjct 191 T---VSMVIGGNNRRSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADR 247 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG- 433 +L + + + +N++ +P K Q + SAT + VK L+ + P VD+ Sbjct 248 ILEENFEEDMNKILKILP------KTRQTALFSAT-QTSKVKDLARVSLTSPVHVDVDDG 300 Query 434 -EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + + V K + Sbjct 301 RRKVTNEGLEQGYCVVPSKQRLIL------------------------------------ 324 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 + +K++ + ++F T + K +HG + Sbjct 325 ----LISFLKKNLNKKIMVFFSTCKSVQFHTEIM---------KISDVDVSDIHGGMDQN 371 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA-ER 611 R + F K L+CTDVAARG+DI V ++I PD+ Y+HR+GR R Sbjct 372 RRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGA 431 Query 612 MGLAISLVATEKEKVWYHVCSSR 634 G A+ ++ E+ + ++ +++ Sbjct 432 KGKALLVLIPEELQFIRYLKAAK 454 Score = 93.7 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 29/92 (32%), Positives = 46/92 (50%), Gaps = 5/92 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F + + + + A++EM + T IQA SI +L G DVL AA TGSGKT AF IP ++ Sbjct 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 ++++ + G T + + Sbjct 150 LLFKERFSPRNG-----TGVIVICPTRELAIQ 176 >sp|Q6C7D2|HAS1_YARLI ATP-dependent RNA helicase HAS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=HAS1 PE=3 SV=1 Length=605 Score = 265 bits (678), Expect = 4e-78, Method: Composition-based stats. Identities = 79/393 (20%), Positives = 147/393 (37%), Gaps = 64/393 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 + +K G + + + KF P N ++V P+RELA Q Sbjct 163 PPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLRKLKFKPRNGTGVIVVSPTRELALQIYGV 222 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQV 364 + + N ++IGG R + L GV+++V TPGRL D + ++ + Sbjct 223 ARDL---MANHSQTLGIVIGGNNRRQEEEKLNKGVNLLVCTPGRLLDHLQNSQGFVFKNL 279 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 + L++DEAD +L G+ + + +P K Q ++ SAT + V+ L+ + Sbjct 280 KALIIDEADRILEIGFEQEMKEIIKILP------KERQSMLFSAT-QTTKVEDLARISLK 332 Query 425 F-PTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 P ++++ + S + + V + Sbjct 333 KGPLYLNVDEHNVSSTAEGLEQGYVVCDSDK----------------------------- 363 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + +K + + I+F + + Sbjct 364 -----------RFLLLFSFLKRNAGKKIIVFLSSCNSVKFYGELL---------NYIDLP 403 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 + LHG +K +R F LICTDVAARG+DI V ++I PD+ ++Y+H Sbjct 404 VLDLHGKQKQQKRTNTFFEFINAKQGVLICTDVAARGLDIPKVDWIIQFDPPDDPRDYIH 463 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 R+GR R G +I + + ++ +++ Sbjct 464 RVGRTARGSASGKSIMFLTPSELGFLRYLKAAK 496 Score = 106 bits (264), Expect = 1e-22, Method: Composition-based stats. Identities = 30/93 (32%), Positives = 49/93 (53%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + Q++++M + T +Q ++IP +L G DVL AA+TGSGKT AF IP I++ Sbjct 133 FSTIPLSENTMQSLKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEM 192 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + + G T S + + Y Sbjct 193 LRKLKFKPRNG-----TGVIVVSPTRELALQIY 220 >sp|Q9UMR2|DD19B_HUMAN ATP-dependent RNA helicase DDX19B OS=Homo sapiens OX=9606 GN=DDX19B PE=1 SV=1 Length=479 Score = 261 bits (668), Expect = 5e-78, Method: Composition-based stats. Identities = 112/467 (24%), Positives = 188/467 (40%), Gaps = 109/467 (23%) Query 228 FPACVLKNAELKFNFG---EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQV 277 F LK L+ + K + L++ P I +SQ A + Sbjct 94 FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAML 153 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 +Q + P+ L + P+ ELA QT I+Q K+ P+L+ + G + E Sbjct 154 SQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY--PELKLAYAVRGNKLERGQKISE 211 Query 338 NGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVT 395 IV+GTPG + D S ++ +++ VLDEAD ++ +QG+ D R+ +P Sbjct 212 ---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP--- 265 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + Q+++ SAT V K ++K++ P + LK E+ DT+ V + + ++ Sbjct 266 ---RNCQMLLFSATFED-SVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKF 321 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + L Y I QA+IFC T Sbjct 322 ----------------------------------QALCNLYGAITIA-----QAMIFCHT 342 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + L ++G L G+ +R +ERF++G + L+ T+V Sbjct 343 RKTASWLAAELSKEG---------HQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVC 393 Query 576 ARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 ARGID+ V VIN LP + + Y+HRIGR GR + GLA+++V ++ Sbjct 394 ARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK------- 446 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 + M +L+ I+EH N I +++ D Sbjct 447 ------------------------HSMNILNRIQEHFNKKIERLDTD 469 Score = 86.3 bits (212), Expect = 2e-16, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 59/149 (40%), Gaps = 3/149 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+ + P++ Q V M + P+ IQ ++PL+L +++ +++G+GKT AF + Sbjct 91 VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVL 150 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V K Q T + QM + A G + + Sbjct 151 AMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKIS 210 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 T G + ++ D +V Sbjct 211 EQIVIGTPGTVLD-WCSKLKFIDPKKIKV 238 >sp|Q84T03|RH27_ORYSJ DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0802700 PE=3 SV=1 Length=590 Score = 264 bits (675), Expect = 6e-78, Method: Composition-based stats. Identities = 93/409 (23%), Positives = 170/409 (42%), Gaps = 54/409 (13%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 + +K G + + F+P N ++V P+RELA QT N K+ KY Sbjct 137 MGAAKTGSGKTLAFLIPAIEMLHHAHFMPRNGTGVVVVCPTRELAIQTHNVAKELMKYHS 196 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEAD 373 IIGG R + L GV+++V TPGRL D + +T +++ L++DEAD Sbjct 197 QTL---GYIIGGNGRRGEADQLAKGVNLLVATPGRLLDHLQNTKGFIYRRLKCLIIDEAD 253 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LL Q + + + ++ ++P Q ++ SAT + VK+ ++ K Sbjct 254 RLLEQNFEEDMKQIFKRLPL------NRQTVLFSAT-QTEQVKEFAKLSFE-------KN 299 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E+S V V + +T+ E L + + D + Sbjct 300 EESTSKPV--YVGVDDAETNATVEGLQQGYCVIDSAR----------------------R 335 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +K+ + + ++F + + Q C +HG +K + Sbjct 336 FLVLYAFLKKKQNKKVMVFFSSCNSVKFHAELL---------NFLQIECSDIHGKQKQQK 386 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-M 612 R F K + L+CT+VAARG+DI V +++ PDE ++Y+HR+GR R E+ Sbjct 387 RTTTFFNFCKAEKGILLCTNVAARGLDIPDVDFIVQYDPPDEPKDYIHRVGRTARGEKGK 446 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 G A+ + ++ K ++ +++ E+ + + ++ E Sbjct 447 GEALLFLLPQELKFLIYLKAAKI-SLTELVFNENKVPNLQSHLENIVGE 494 Score = 99.4 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 35/99 (35%), Positives = 52/99 (53%), Gaps = 5/99 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FSE+GV A+A+ EM++ T IQA SIP +L G DV+ AA+TGSGKT AF IP I++ Sbjct 98 FSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEM 157 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 ++ + G T + + ++ Sbjct 158 LHHAHFMPRNG-----TGVVVVCPTRELAIQTHNVAKEL 191 >sp|Q9NUU7|DD19A_HUMAN ATP-dependent RNA helicase DDX19A OS=Homo sapiens OX=9606 GN=DDX19A PE=1 SV=1 Length=478 Score = 261 bits (667), Expect = 7e-78, Method: Composition-based stats. Identities = 111/467 (24%), Positives = 188/467 (40%), Gaps = 109/467 (23%) Query 228 FPACVLKNAELKFNFG---EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQV 277 F LK L+ + K + L++ P I +SQ A + Sbjct 93 FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAML 152 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 ++ + P+ L + P+ ELA QT I+Q K+ P+L+ + G + E Sbjct 153 SRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFY--PELKLAYAVRGNKLERGQKISE 210 Query 338 NGVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVT 395 IV+GTPG + D S ++ +++ VLDEAD ++ +QG+ D R+ +P Sbjct 211 ---QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP--- 264 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 + Q+++ SAT V K ++K++ P + LK E+ DT+ V + + ++ Sbjct 265 ---RNCQMLLFSATFED-SVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKF 320 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 + L Y I QA+IFC T Sbjct 321 ----------------------------------QALCNLYGAITIA-----QAMIFCHT 341 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + L ++G L G+ +R +ERF++G + L+ T+V Sbjct 342 RKTASWLAAELSKEG---------HQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVC 392 Query 576 ARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 ARGID+ V VIN LP + + Y+HRIGR GR + GLA+++V ++ Sbjct 393 ARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK------- 445 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 + M +L+ I+EH N I +++ D Sbjct 446 ------------------------HSMNILNRIQEHFNKKIERLDTD 468 Score = 84.4 bits (207), Expect = 8e-16, Method: Composition-based stats. Identities = 28/149 (19%), Positives = 60/149 (40%), Gaps = 3/149 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+ + P++ Q V M + P+ IQ ++P++L +++ +++G+GKT AF + Sbjct 90 VKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVL 149 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V + + Q T + QM + A G + + Sbjct 150 AMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKIS 209 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 T G + ++ D +V Sbjct 210 EQIVIGTPGTVLD-WCSKLKFIDPKKIKV 237 >sp|Q0E2Z7|RH41_ORYSJ DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0201900 PE=2 SV=2 Length=536 Score = 263 bits (671), Expect = 7e-78, Method: Composition-based stats. Identities = 97/440 (22%), Positives = 175/440 (40%), Gaps = 73/440 (17%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 D+ + FS +G L +++ ++ + + Sbjct 131 DVPDPIMCFSSSGLPEKLVL----NLEAAGYVMPTPVQMQVIP--------SSICNRSLL 178 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTK----FLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 + G A + + P A+++ P+REL Q K K Sbjct 179 VSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKG 238 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + + L++GG Q+ +ENG++++VGTPGRL DL+ ++L++V VLDE Sbjct 239 LP---FKTALVVGGDPLAQQIYRIENGIELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEV 295 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D LL +G+ D + ++ + QV++ SAT++S +V+K+S + + Sbjct 296 DCLLERGFRDQVMQIFQAL-------SHPQVMMFSATVNS-EVEKMSNSLAKNAIHISCG 347 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 +V VV+ V K + Sbjct 348 NPSRPNKSVKQVVIWVESKQKK-------------------------------------- 369 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 + + + K+H A++F ++I D L + G V +HGD+ + Sbjct 370 QKIFEIMTSKQHFKPPAVVFVSSRIGADLLSEAITVATG--------LKVVSIHGDKTMN 421 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER+++L RF G+V ++CT V RG+D+ V VI +P+ YVH++GR R Sbjct 422 ERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQVGRASRMGVE 481 Query 613 GLAISLVATEKEKVWYHVCS 632 G+AI V E ++ + Sbjct 482 GMAIVFVNEEDRNLFRELVQ 501 Score = 94.4 bits (233), Expect = 6e-19, Method: Composition-based stats. Identities = 57/370 (15%), Positives = 120/370 (32%), Gaps = 56/370 (15%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS G+ ++ +E +++PT +Q + IP + +L++A+TGSGKT +F +P+ Sbjct 136 IMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPI 195 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 I ++ K+G I + + + ++ G + V Sbjct 196 IAHCSHVRSERCTDKQGPLAI--VLAPTRELCLQVEEQAKVLGKGLP--FKTALVVGGDP 251 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD 180 + + G E+ G R+ M+ ++DL NK Sbjct 252 LAQQIYRIENGI---ELIVGTPG--RLIDLLMKHNVDL-----------------NKV-- 287 Query 181 NYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLA-FEIPPHMKNQALFPACVLKNAELK 239 D +D+ + +D + F+ H + + ++ Sbjct 288 ---------DVFV----LDEVDCLLERGFRDQVMQIFQALSHPQVMMFSATVNSEVEKMS 334 Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRE 297 + + + I ++ + P A++ SR Sbjct 335 NSLAKNAIHISCGNPSRPNKSVKQVVIWVESKQKKQKIFEIMTSKQHFKPPAVVFVSSR- 393 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGTP--GRLD 351 ++ + L+ + I G ++ L V +VV T GR Sbjct 394 ----IGADLLS-EAITVATGLKVVSIHGDKTMNERRESLRRFLTGEVSVVVCTGVLGRGM 448 Query 352 DLVSTGKLNL 361 DL+ ++ L Sbjct 449 DLLKVRQVIL 458 >sp|Q0DLB9|RH17_ORYSJ DEAD-box ATP-dependent RNA helicase 17 OS=Oryza sativa subsp. japonica OX=39947 GN=RH17 PE=2 SV=2 Length=591 Score = 264 bits (675), Expect = 7e-78, Method: Composition-based stats. Identities = 111/571 (19%), Positives = 195/571 (34%), Gaps = 57/571 (10%) Query 208 NGKDLGLAFEIPPHMKNQALFPAC-----VLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 K LG + + + LF +C L + F+ P + A+ A Sbjct 1 MAKKLGKSP-VAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAM 59 Query 263 DG---YIVKSQHSGNAQVTQTKFLP------------NAPKALIVEPSRELAEQTLNNIK 307 G + + +G + + AL++ P+REL Q + Sbjct 60 SGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQ 119 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRF 366 Q L I+GG + + L G+ I++ TPGRL D + T +R+ Sbjct 120 QLVH--RFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRW 177 Query 367 LVLDEADGLLSQGYSDFINRMHNQI---------PQVTSDGKRLQVIVCSATLHSFDVKK 417 +V DEAD +L G+ + + + + + + Q ++ SATL+ V + Sbjct 178 IVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLN-EKVNR 236 Query 418 LSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 L++ + P + L ++S +H + + + + L + DD Sbjct 237 LAKISLKNPVMIGLDEQNSSAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQ 296 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP---- 533 S +L + + ++F T D Q P Sbjct 297 RYVKVSCGSRLAILL--TILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQL 354 Query 534 --DKKGHQFSC--VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN 589 DKK SC LHG+ +RK++ F L+ TDVAARG+D V +I Sbjct 355 DTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQ 414 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGC 649 P E YVHR+GR R G A+ + + + G T Sbjct 415 YDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELH---GASLTEYPLQKVL 471 Query 650 TIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILA 709 + Q L + + ++ + ++ ++ F +K A D Sbjct 472 DSFPVNGQRLHK-RKQISLDMHPWIMSLQRALESFVTSEDTTKKLAR---------DAFC 521 Query 710 PTVQELAALEKEAQTSFLHLGYLPNQLFRTF 740 V+ A E + F+ + R+F Sbjct 522 SWVRAYTAHRGELKKIFMVKKLHLGHVARSF 552 Score = 89.0 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 53/95 (56%), Gaps = 4/95 (4%) Query 3 AFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F+++G+ P + + ++M + PT IQA++IP+ + G +L+ A TG+GKT A+ P++ Sbjct 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 ++ +++ + ++ T + + Y Sbjct 84 HLL--QMREPRV-ERTDGTFALVLVPTRELCLQVY 115 >sp|A4R8G3|DBP8_PYRO7 ATP-dependent RNA helicase DBP8 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP8 PE=3 SV=3 Length=579 Score = 264 bits (674), Expect = 8e-78, Method: Composition-based stats. Identities = 104/435 (24%), Positives = 165/435 (38%), Gaps = 64/435 (15%) Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S+ G + + Q P+A A+++ +RELA Q +QFK L Sbjct 192 SRTGSGKTIAFAVPILQKYAQD---PSAIFAVVLTATRELALQIY---EQFKAVSSPHVL 245 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADG 374 + LIIGG R Q L IV+ TPGRL D + + + L +V+FLVLDEAD Sbjct 246 KAALIIGGSDMRSQAIALAQRPSIVIATPGRLADHIRSSGEDTICGLRRVKFLVLDEADR 305 Query 375 LLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 LLS +G + + + V + Q ++ +AT+ P LK Sbjct 306 LLSSKGPGSMLPHIDECM-AVLPPPEDRQTLLFTATVT--------------PEVRALKE 350 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 + P V V+ + + + L +S+I+ H + Sbjct 351 MPTRPGKEPVHVCEVDTQVLAIPDSLKQSYIQLTVTHREHFLHEFL-------------- 396 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + IIF + LH + + Sbjct 397 ------LTAANTERSIIIFVNRTSTAQF---------LHHLLRLLDHRVTSLHSKLRQQQ 441 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R NL RF+ R L+ TDVA+RG+DI V V+N LP + +Y+HR+GR RA R G Sbjct 442 RIDNLGRFRASAARILVATDVASRGLDIPEVSVVVNYDLPRDPDDYIHRVGRTARAGRKG 501 Query 614 LAISLVATEKEKVWYHVCSSRGKGCY---------NTRLKEDGGCTIWYNEMQLLSEIEE 664 A++ V ++ + G+ TR+ D + + + L IEE Sbjct 502 EAVNFVGQRDVELVLAIEKRVGRPMEKWEEEGVNLETRVIRDSLKLVSEKKREALLNIEE 561 Query 665 HLNCTISQVEPDIKV 679 + + +K+ Sbjct 562 NREVGGRRKRQKLKL 576 Score = 91.3 bits (225), Expect = 8e-18, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 45/103 (44%), Gaps = 9/103 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F +GV P + Q++ + PT IQ I IL G D + + TGSGKT AF++P++ Sbjct 148 TTFESLGVEPWLVQSLANLAVKRPTGIQKGCIGEILKGRDCIGGSRTGSGKTIAFAVPIL 207 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q+ + + + + Y++ A + Sbjct 208 ---------QKYAQDPSAIFAVVLTATRELALQIYEQFKAVSS 241 >sp|A1CTZ2|DBP4_ASPCL ATP-dependent RNA helicase dbp4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp4 PE=3 SV=1 Length=823 Score = 270 bits (689), Expect = 9e-78, Method: Composition-based stats. Identities = 96/463 (21%), Positives = 172/463 (37%), Gaps = 78/463 (17%) Query 195 YLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG 254 LD+ + FS DL L+ + + +++ + Sbjct 41 GLDLKESFESFS----DLPLSEPTLSGLTSSHFKTLTDIQSRAISHAL--------KGRD 88 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYI 313 + +K G + + + ++ + ALI+ P+RELA Q +++ +Y Sbjct 89 VLGAAKTGSGKTLAFLVPVLENLYRRQWAEHDGLGALILSPTRELAIQIFEVLRKIGRY- 147 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEA 372 L+IGG + R++ L ++I+V TPGR L L T + ++ LVLDEA Sbjct 148 --HTFSAGLVIGGKSLREEQERL-GRMNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEA 204 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L G+ ++ + +P K Q ++ SAT + V L+ + P +V + Sbjct 205 DRILDLGFQQTVDAIVGHLP------KERQTLLFSAT-QTKKVSDLARLSLRDPEYVAVH 257 Query 433 GEDSV----PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 S H+V+ P+ K D LW Sbjct 258 ETASTATPAKLQQHYVIAPLPQKLDILWS------------------------------- 286 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 I+ + + ++F + + + F G + LHG Sbjct 287 -----------FIRSNLKSKTMVFFSSGKQVRFVYESFRHMQPG-------IPLMHLHGR 328 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +K R + F + L TDVAARG+D V +VI + P++ Y+HR+GR R Sbjct 329 QKQGGRLDIMTNFSQAKHCVLFSTDVAARGLDFPAVDWVIQMDCPEDADTYIHRVGRTAR 388 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 R G A+ + +E+ + +K + +I Sbjct 389 YGRDGRAVLFLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSI 431 Score = 94.8 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 27/101 (27%), Positives = 46/101 (46%), Gaps = 5/101 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ + + + TDIQ+ +I L G DVL AA+TGSGKT AF +PV++ Sbjct 50 SFSDLPLSEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVLE 109 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +Y + +G S + + ++ Sbjct 110 NLYRRQWAEHDG-----LGALILSPTRELAIQIFEVLRKIG 145 >sp|Q0J7Y8|RH45_ORYSJ DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0154200 PE=3 SV=2 Length=947 Score = 272 bits (694), Expect = 1e-77, Method: Composition-based stats. Identities = 102/498 (20%), Positives = 175/498 (35%), Gaps = 128/498 (26%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 GL ++ +K ++ L + ++K G + Sbjct 288 VQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMS--------GRDCIGIAKTGSGKTLAF 339 Query 270 QHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + K P + P LI+ P+REL Q ++IK+F K + + + I Sbjct 340 VL---PMLRHVKDQPPVVPGDGPIGLIMAPTRELVVQIHSDIKKFAK---SLGINCVAIY 393 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYS 381 GG Q+S L+ G +IVV TPGR+ D++ S NL +V FLV+DEAD + G+ Sbjct 394 GGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFE 453 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I R+ + Q ++ SA V+ L+ K++ P + + G V + Sbjct 454 PQITRIVQ------NTRPDRQTVLFSAIFP-RQVEILARKVLTKPVEIQVGGRSVVNKDI 506 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 +V L Sbjct 507 TQLVEVRPENERFLRLLELLGEWFDR---------------------------------- 532 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + ++F ++ CD+L + Q+G + C+ LHG + +R+ L F Sbjct 533 -----GKILVFVHSQDKCDSLLKDLFQRG---------YPCLSLHGGKDQTDRESTLADF 578 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 K + V+N +P+ ++YVHR+GR G A R G A++ ++ Sbjct 579 K-------------------SNLELVVNYDVPNHYEDYVHRVGRTGHAGRKGFAVTFISD 619 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 E+E+ + + L + V D+K Sbjct 620 EEERYAPDLAKA--------------------------------LELSEQAVPQDLKGLA 647 Query 682 DEFDGKVTYGQKRAAGGG 699 D F KV G ++A G G Sbjct 648 DRFMAKVKQGTEQAHGTG 665 Score = 116 bits (290), Expect = 2e-25, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 66/154 (43%), Gaps = 20/154 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + + G+ ++ ++++ + P IQA+++P+I+ G D + A+TGSGKT AF +P+ Sbjct 284 IKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPM 343 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI----------GSDGLC 110 ++ V KDQ G I + + + + FA G G+ Sbjct 344 LRHV----KDQPPVVPGDGPIGLIMAPTRELVVQIHSDIKKFAKSLGINCVAIYGGSGVA 399 Query 111 CQSREVKE-WHGCRATKGLMKGKHYYEVSCHDQG 143 Q E+K T G ++ C G Sbjct 400 QQISELKRGAEIVVCTPGR-----MIDILCTSSG 428 >sp|Q1EB31|DBP4_COCIM ATP-dependent RNA helicase DBP4 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP4 PE=3 SV=1 Length=806 Score = 269 bits (687), Expect = 1e-77, Method: Composition-based stats. Identities = 88/417 (21%), Positives = 161/417 (39%), Gaps = 67/417 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNN 305 + +K G + + + ++ + ALI+ P+RELA Q Sbjct 80 PHAIKGRDILGAAKTGSGKTLAFLVPVLENLYRKQWTEYDGLGALILSPTRELAIQIFEV 139 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQV 364 +++ +Y L+IGG + +++ L ++I+V TPGR L + T + + + Sbjct 140 LRKIGRY---HTFSAGLVIGGKSLQEEQERL-GRMNILVCTPGRMLQHMDQTAAFDTAHI 195 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 + LVLDEAD ++ G+ ++ + +P K Q ++ SAT + V L+ + Sbjct 196 QMLVLDEADRIMDMGFQSTVDAIVEHLP------KERQTMLFSAT-QTKKVSDLARLSLR 248 Query 425 FPTWVDLK--GEDSVPDTVHH--VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 P ++ + + P ++ VV P+ K D LW Sbjct 249 DPEYISVHEAASSATPASLQQHYVVTPLPEKLDTLWS----------------------- 285 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 I+ + ++F + + + F G Sbjct 286 -------------------FIRNTLKSKILVFFSSSKQVRFVYEAFRHMQPG-------I 319 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 + LHG +K R +F + L TDVAARG+D V +VI + P++ Y+ Sbjct 320 PLLHLHGRQKQSARIDITSKFSRAKYSCLFSTDVAARGLDFPAVDWVIQLDCPEDADTYI 379 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 HR+GR R ER G A+ + +E+ + +K +I N++Q Sbjct 380 HRVGRTARYERDGRAVLFLDPSEEEGMLKRLEQKKIPIERINIKAKKQQSI-MNQLQ 435 Score = 94.4 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 28/101 (28%), Positives = 49/101 (49%), Gaps = 5/101 (5%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FSE+ + Q + + TDIQ+ ++P + G D+L AA+TGSGKT AF +PV++ Sbjct 49 SFSELPLSDATLQGLSASHFKTLTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLE 108 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +Y + Q G + S + + ++ Sbjct 109 NLY---RKQWTEYDGLGAL--ILSPTRELAIQIFEVLRKIG 144 >sp|A7TJK8|PRP5_VANPO Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=PRP5 PE=3 SV=1 Length=872 Score = 270 bits (690), Expect = 1e-77, Method: Composition-based stats. Identities = 116/496 (23%), Positives = 199/496 (40%), Gaps = 74/496 (15%) Query 233 LKNAELKFNFGEEEFKFPPKDGFVALSKAPDG----YIVKSQHSGNAQVTQTKFLPNAPK 288 LK E + + +SK G YI+ AQ T +K P Sbjct 295 LKYDEPTAIQSQAIPAIMSGRDLIGISKTGSGKTISYILPMLRQIKAQRTLSK-NETGPL 353 Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 LI+ P+RELA Q +++F K + +R + GG + Q++ L+ GV+IVV TPG Sbjct 354 GLILAPTRELALQINEEVEKFTK--QDRSIRTICCTGGSEMKKQINDLKRGVEIVVATPG 411 Query 349 RLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 RL D++ S ++ ++ F+V+DEAD L G+ I ++ + Q ++ Sbjct 412 RLIDILTLNSGKLISTKRITFVVMDEADRLFDMGFEPQITQIMKTV------RPDKQCVL 465 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT + ++ + +I+ P V + + V + V+ + + D+ + Sbjct 466 FSATFPN-KLRSFAARILTDPLTVTINSNNLVNENVNQSFYIEDNENDKFNRL-----VN 519 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 D K N +NS E + +E + IIF ++ CD L Sbjct 520 ILDGFYKVNKNITSNSEEREID--------------EEVSDKKIIIFVSSQQFCDLLYSK 565 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 G P +H + ER NLE+FK L+CT+V +RG+++ V Sbjct 566 LENFGYFP---------YTIHAGKPYQERVMNLEKFKTTTNSILLCTEVLSRGLNVPEVS 616 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VI YVH GR R G AI+L+ ++ Y + + + Sbjct 617 LVIIYNAAKTFAQYVHTTGRTARGTHKGDAITLLLPDELAAAYILKRALRE--------- 667 Query 646 DGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHV 705 + LS I+ Q+ D+K + F+ + G+ + + G KG Sbjct 668 -----------RELSSIDP-------QMVEDMKQMSERFESGMKEGKYKLSKGFGGKGLD 709 Query 706 DILAPTVQELAALEKE 721 ++ T +E E++ Sbjct 710 NL--DTKREEKQQEEK 723 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 79/186 (42%), Gaps = 17/186 (9%) Query 1 MAAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ +I + +E+ + PT IQ+++IP I+ G D++ ++TGSGKT ++ +P Sbjct 275 ITRWSQLGLPTDIMNLITKELKYDEPTAIQSQAIPAIMSGRDLIGISKTGSGKTISYILP 334 Query 60 VIQIVYETLKDQQEGKKGKT-TIKTGASVLNKWQMNPYDRGSAFAI---GSDGLCCQSRE 115 +++ + K Q+ K +T + + + + + F +CC Sbjct 335 MLRQI----KAQRTLSKNETGPLGLILAPTRELALQINEEVEKFTKQDRSIRTICCTGGS 390 Query 116 VKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSH 175 + +G+ E+ G + T+ + + T + F + Sbjct 391 EMKKQINDLKRGV-------EIVVATPGRL-IDILTLNSGKLISTKRITFVVMDEADRLF 442 Query 176 NKQFDN 181 + F+ Sbjct 443 DMGFEP 448 >sp|Q6CKI1|PRP5_KLULA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=PRP5 PE=3 SV=1 Length=812 Score = 269 bits (687), Expect = 1e-77, Method: Composition-based stats. Identities = 115/517 (22%), Positives = 194/517 (38%), Gaps = 94/517 (18%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 LGL+ EI + N+ L+ L + + +SK G V Sbjct 249 QLGLSSEIMDLISNE-------LQFVTLTPIQCQAIPAIMSGRDVIGISKTGSGKTVAFL 301 Query 271 HSGNAQVTQTKFL---PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 Q+ L P LI+ P+RELA Q K+ + + +GG Sbjct 302 LPLVRQIKAQPPLAPDETGPIGLILTPTRELAVQIQEEA---LKFCKGSGISSICCVGGS 358 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFI 384 + Q++ L+ GVDI+V TPGR DL++ L+ +++ F+V+DEAD L G+ + Sbjct 359 ELKQQINELKRGVDIIVATPGRFIDLMTLNSGHLLSPTRISFVVMDEADRLFDLGFGPQV 418 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 N++ I Q ++ SAT S +K + + + P + + + + + + Sbjct 419 NQIMGCI------RPDKQCVLFSATFPS-KLKHFASRTLKNPIQITINSKSLINENIQQR 471 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V E + +LK A+ Sbjct 472 V---------------------------------QIFDEEHVKFEFLLKRLSDRLALHRG 498 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + ++ IIF ++ CD L + G + +H + ER +NL++FK+ Sbjct 499 EDEKTIIFVGSQQLCDLLYDELLLNG---------ITTFPIHAGKPSAERLRNLQKFKET 549 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 D LICT+V +RG+++ V VI YVH +GR GR G+A+S V ++ Sbjct 550 DNGILICTEVLSRGLNVPEVSLVIIYNAAKTIAQYVHTVGRTGRGTNNGVALSFVMVDEL 609 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 Y + + NE+ + + V +K DEF Sbjct 610 ASAYILVK-----------------CMKENELSSVPMV----------VYQKLKEMNDEF 642 Query 685 DGKVTYGQKRAAGGGSYKG--HVDILAPTVQELAALE 719 + G+ R G KG H+D L Q + Sbjct 643 SSGLKTGKYRLIQGFGGKGLDHLDELNEAKQSQEYTD 679 Score = 102 bits (255), Expect = 3e-21, Method: Composition-based stats. Identities = 44/210 (21%), Positives = 85/210 (40%), Gaps = 22/210 (10%) Query 1 MAAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ EI + E+ ++ T IQ ++IP I+ G DV+ ++TGSGKT AF +P Sbjct 244 VTKWSQLGLSSEIMDLISNELQFVTLTPIQCQAIPAIMSGRDVIGISKTGSGKTVAFLLP 303 Query 60 VIQIVYETLKDQQEGKKGKT-TIKTGASVLNKWQMNPYDRGSAF--AIGSDGLCCQSREV 116 +++ + K Q +T I + + + + F G +CC Sbjct 304 LVRQI----KAQPPLAPDETGPIGLILTPTRELAVQIQEEALKFCKGSGISSICCVGGSE 359 Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHN 176 + +G+ ++ G + T+ + L + F + + Sbjct 360 LKQQINELKRGV-------DIIVATPGRF-IDLMTLNSGHLLSPTRISFVVMDEADRLFD 411 Query 177 KQFDNYGEEFTMHDTIGCYLDIDKGHVKFS 206 F ++ +GC + DK V FS Sbjct 412 LGFGP-----QVNQIMGC-IRPDKQCVLFS 435 >sp|Q0UMB9|DBP4_PHANO ATP-dependent RNA helicase DBP4 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP4 PE=3 SV=1 Length=803 Score = 268 bits (686), Expect = 1e-77, Method: Composition-based stats. Identities = 97/463 (21%), Positives = 170/463 (37%), Gaps = 77/463 (17%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 LD G + DL L+ +K ++ + + Sbjct 41 LDPKTGT---YNDFSDLPLSDPTKQGLKACHFAVMTDIQRKAVPLALKGHD--------I 89 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFL--PNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 + +K G + + + + + ALI+ P+RELA Q + + + K+ Sbjct 90 LGAAKTGSGKTLSFIIPVLENLYRLQHVGADAGLGALILSPTRELAIQIFDVLCKIGKH- 148 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEA 372 L+IGG + + L ++I+V TPGR L L T + ++ LVLDEA Sbjct 149 -GHMFAAGLLIGGKSLESERQALPR-MNILVATPGRMLQHLSQTAAFLVDDLKMLVLDEA 206 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +L G+ ++ + + +P K Q ++ SAT S V L+ + P +V + Sbjct 207 DRILDMGFQRDVDAIIDYLP------KERQTLLFSAT-QSKKVSDLARLSLQDPEYVSVH 259 Query 433 GEDS--VPDTVHH--VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 ED P ++ ++ P+ K D LW + S Sbjct 260 AEDKSATPKSLQQNYIICPLEEKLDTLWSFIQAS-------------------------- 293 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 K + ++F + + + F G + +HG Sbjct 294 ----------------KKSKILVFFSSAKAVRFVYESFRHMQPG-------IPLLHIHGR 330 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +K R +F L TDVAARG+D V +VI V PD+ Y+HR+GR R Sbjct 331 QKQGARLDTTAKFSSAKNSCLFATDVAARGLDFPAVDFVIQVDCPDDVDTYIHRVGRTAR 390 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 R G + +A +E+ ++ +++ +I Sbjct 391 YNREGRGVLFLAPSEEEGMLKRLEAKKVPVEAINVRQKKRQSI 433 Score = 95.6 bits (236), Expect = 5e-19, Method: Composition-based stats. Identities = 29/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (4%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + Q ++ + + TDIQ +++PL L G D+L AA+TGSGKT +F IPV++ Sbjct 51 FSDLPLSDPTKQGLKACHFAVMTDIQRKAVPLALKGHDILGAAKTGSGKTLSFIIPVLEN 110 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 +Y Q S + + +D Sbjct 111 LYRL----QHVGADAGLGALILSPTRELAIQIFDVLCKIGKHGHMFAAG 155 >sp|A2QS00|DBP4_ASPNC ATP-dependent RNA helicase dbp4 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp4 PE=3 SV=1 Length=802 Score = 268 bits (686), Expect = 1e-77, Method: Composition-based stats. Identities = 97/462 (21%), Positives = 172/462 (37%), Gaps = 78/462 (17%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 LD+ + +F+ DL L+ + + +++ + Sbjct 40 LDVKETIEQFT----DLPLSEPTASGLASSHYKTLTDIQSRAISHAL--------KGRDI 87 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYID 314 + +K G + + + ++ + AL++ P+RELA Q +++ +Y Sbjct 88 LGAAKTGSGKTLAFLIPILENLYRKQWSEHDGLGALVLSPTRELAIQIFEVLRKVGRY-- 145 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEAD 373 L+IGG + R++ L ++I+V TPGR L L T ++ LVLDEAD Sbjct 146 -HTFSAGLVIGGKSLREEQERL-GRMNILVCTPGRMLQHLDQTSFFETHNLQMLVLDEAD 203 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK- 432 +L G+ ++ + +P K Q ++ SAT + V L+ + P +V + Sbjct 204 RILDMGFQKTVDAIIGHLP------KERQTLLFSAT-QTKKVSDLARLSLQDPEYVAVHE 256 Query 433 -GEDSVPDTVHH--VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + P + VV P+ K D LW Sbjct 257 AASSATPSKLQQHYVVTPLPQKLDVLWS-------------------------------- 284 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 I+ + + I+F + + + F G + LHG + Sbjct 285 ----------FIRSNLKSKTIVFLSSGKQVRFVYESFRHMQPG-------VPLMHLHGRQ 327 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 K R +F L TDVAARG+D V +VI + P++ Y+HR+GR R Sbjct 328 KQGGRLDITTKFSSAQHAVLFATDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARY 387 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 ER G A+ + +EK + +K + +I Sbjct 388 ERDGRAVLFLDPSEEKGMLKRLEQKKVQVERINVKANKQQSI 429 Score = 92.1 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 26/101 (26%), Positives = 47/101 (47%), Gaps = 5/101 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+++ + A + + TDIQ+ +I L G D+L AA+TGSGKT AF IP+ Sbjct 46 IEQFTDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLIPI 105 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA 101 ++ +Y + +G S + + ++ Sbjct 106 LENLYRKQWSEHDG-----LGALVLSPTRELAIQIFEVLRK 141 >sp|A5DUB2|MAK5_LODEL ATP-dependent RNA helicase MAK5 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=MAK5 PE=3 SV=1 Length=855 Score = 269 bits (688), Expect = 2e-77, Method: Composition-based stats. Identities = 94/483 (19%), Positives = 181/483 (37%), Gaps = 33/483 (7%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDGYIVKSQ 270 L+ I + N ++ + ++ G +A ++S Sbjct 226 LSPYILNGLSNMKFTTPTPIQKRTIPLALEGKDVIGKATTGSGKTLAYGIPILEKYIQSL 285 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + +V + N P +I P+RELA Q ++++ + +Y + + GG++ + Sbjct 286 DTVKRKVREKVV--NHPTGIIFAPTRELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSIQ 343 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF---LVLDEADGLLSQGYSDFINRM 387 Q +L G I+V TPGR+ +L + + ++ +VLDEAD LL G+ + ++ Sbjct 344 KQERLLSFGPGIIVATPGRMLELCQNDQELVKRLSMTDIIVLDEADRLLQDGHFEEFEKI 403 Query 388 HNQIPQVTSDGKR-----LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + Q +V SAT KL ++ V G+ Sbjct 404 LELFNKNRPKNDKSIEWKWQTLVFSATFSRDLFGKLDKQ--QKQKSVKGNGKALNKADSG 461 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + +V + + L E+L V A E E + + Y + Sbjct 462 NSLVQNDEIIELLREKLRFKDKAPSLVDANPKEIVSGQITEALVECGPLERDLYLYYFLL 521 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +K ++F + L +H +R ++LERFK Sbjct 522 MYK-GSTLVFANSIDSVKRLVPLLNNL---------NIPAFAIHSSMIQKQRLRSLERFK 571 Query 563 ----KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 K L+ +DVAARG+DI + +V + LP Y+HR GR RA + G+++ Sbjct 572 DASEKNQTAVLVASDVAARGLDIPNIDHVAHYHLPRSADVYIHRSGRTARAGKEGVSVMF 631 Query 619 VATEKE----KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 + ++ + + +S N ++ + EM L+S++ + + Sbjct 632 CSPQEASGPLRKLRKLVASNAANNKNQKINVHSDVKLLPVEMDLVSQLRPRVELAGRLAD 691 Query 675 PDI 677 +I Sbjct 692 SNI 694 Score = 98.7 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 39/141 (28%), Positives = 56/141 (40%), Gaps = 17/141 (12%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV- 64 E + P I + M + PT IQ +IPL L G DV+ A TGSGKT A+ IP+++ Sbjct 223 ETCLSPYILNGLSNMKFTTPTPIQKRTIPLALEGKDVIGKATTGSGKTLAYGIPILEKYI 282 Query 65 --YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-----------IGSDGLCC 111 +T+K + K + + D + A + GL Sbjct 283 QSLDTVKRKVREKVVNHPTGIIFAPTRELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSI 342 Query 112 QSREVKEWHG---CRATKGLM 129 Q +E G AT G M Sbjct 343 QKQERLLSFGPGIIVATPGRM 363 >sp|Q6CGD1|DBP4_YARLI ATP-dependent RNA helicase DBP4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP4 PE=3 SV=1 Length=740 Score = 266 bits (681), Expect = 2e-77, Method: Composition-based stats. Identities = 88/455 (19%), Positives = 166/455 (36%), Gaps = 71/455 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++L L+ +KN ++ + + ++ G + Sbjct 41 FEELPLSEATIEGLKNSHYVTCTDVQKRAIPPAL--------QGHDLLGAARTGSGKTLA 92 Query 269 SQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + + K+ + AL++ P+RELA Q +++ + L+IGG Sbjct 93 FLVPVLECLFRNKWSDVDGLGALVISPTRELAVQIFQVLRKIGRCHS---FSAGLVIGGK 149 Query 328 AARDQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + L ++I++ TPGRL + T +LS V+ LVLDEAD +L G+ ++ Sbjct 150 DVAMEADRLAK-LNILICTPGRLLQHMDQTSGFDLSNVKMLVLDEADRILDMGFKKTMDA 208 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE--DSVPDTVHHV 444 + +P Q ++ SAT + V L+ + P ++ + S P + Sbjct 209 ILENLPV------DRQTLLFSAT-QTKSVSDLARLSLADPKYISANPDTTSSTPKNLEQN 261 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V V + K + ++ H Sbjct 262 YVCVELQD----------------------------------------KLDTLWGFLRTH 281 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + I+F + + + F G + LHG +K R + +F K Sbjct 282 TKFKIIVFFSSSKQVRYVYETFRTLQPG-------IPLLHLHGKQKQGARMDVVSKFSKA 334 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L TD+ ARGID V +V+ V P++ Y+HR+GR R + G A+ + +E Sbjct 335 SSSCLFATDIVARGIDFPAVHWVVQVDCPEDAATYIHRVGRSARFGKSGKALLFLTPTEE 394 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 ++ ++ + +I N++Q L Sbjct 395 PAMIQRLEAKHIPINKLTIRPNKKKSI-KNQLQAL 428 Score = 97.1 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 26/93 (28%), Positives = 47/93 (51%), Gaps = 0/93 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ F E+ + + ++ ++ TD+Q +IP L G D+L AA TGSGKT AF +PV Sbjct 38 VSKFEELPLSEATIEGLKNSHYVTCTDVQKRAIPPALQGHDLLGAARTGSGKTLAFLVPV 97 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQM 93 ++ ++ +G T + +Q+ Sbjct 98 LECLFRNKWSDVDGLGALVISPTRELAVQIFQV 130 >sp|Q4P3W3|DBP10_USTMA ATP-dependent RNA helicase DBP10 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP10 PE=3 SV=1 Length=1154 Score = 273 bits (697), Expect = 3e-77, Method: Composition-based stats. Identities = 99/452 (22%), Positives = 172/452 (38%), Gaps = 58/452 (13%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + +GL + + + ++ + + V +++ G + Sbjct 146 FQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPP------RDVVGMARTGSGKTLA 199 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYID----------NPKL 318 ++ K+LI+ PSRELA Q L K+ + + Sbjct 200 YLIPLINRLNGRHSPTFGIKSLILCPSRELAVQILRVGKEIARGWKADAGEGQDSRGEAI 259 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 R +I+GG + +Q ++ N D+V+ TPGR+ L L+L V ++V DEAD L Sbjct 260 RWAIIVGGESLDEQFGIMSNNPDVVIATPGRMLHLTVEMNLDLKSVEYVVFDEADRLFEM 319 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 G+++ + M ++P Q ++ SATL V+ + P V L + + Sbjct 320 GFAEQLEEMLLRLP------PTRQTLLFSATLPKKLVEFTKAGLQANPKLVRLDADSKIS 373 Query 439 DTVHHVVVPVNPKT----------DRLWERLGKSHIRTDDVHAKDNTRPGANSPE-MWSE 487 + V P D + LG+ R D A+ N N + S Sbjct 374 ADLRMAFFSVKPSEKEAALLVLLRDVIGVPLGEQAARDLDEEAQFNEDASDNQADGQRSR 433 Query 488 AIKILKGEYAVRAIKEHKMDQ----------------AIIFCRTKIDCDNLEQYFIQQGG 531 + E+ + +H ++ IIFC TK + Sbjct 434 GYGNRRAEFKGKTKDKHLGNKRKRGGPGGALELLPHQTIIFCATKHHVEY---------L 484 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 ++C ++ R + RF++G LI TDVAARGID+ + +V+N Sbjct 485 LLLLTTTGYACSHIYSSLDQATRGIQMSRFRRGQNSLLIVTDVAARGIDLPVLEHVVNFD 544 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 P + + +VHR+GR RA R G A S+ + Sbjct 545 FPPQPRTFVHRVGRTARAGRNGWAWSMCTNAE 576 Score = 91.3 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 37/63 (59%), Gaps = 2/63 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 F MG+ P + +++ + PT IQ ++IP I+ DV+ A TGSGKT A+ IP+I Sbjct 146 FQSMGLHPSLLRSLLIRGFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTLAYLIPLI 205 Query 62 QIV 64 + Sbjct 206 NRL 208 >sp|Q8TDD1|DDX54_HUMAN ATP-dependent RNA helicase DDX54 OS=Homo sapiens OX=9606 GN=DDX54 PE=1 SV=2 Length=881 Score = 269 bits (687), Expect = 4e-77, Method: Composition-based stats. Identities = 110/441 (25%), Positives = 170/441 (39%), Gaps = 68/441 (15%) Query 220 PHMKNQALFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN--- 274 K F + L K G + + + D + SG Sbjct 90 KKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAC 149 Query 275 -----AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + +T +ALI+ P+RELA QTL K+ K+ L+ LI+GG Sbjct 150 FLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTG---LKTALILGGDRM 206 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 DQ + L DI++ TPGRL + L L V ++V DEAD L G+++ + + Sbjct 207 EDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQEIIA 266 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 ++P Q ++ SATL V+ + + P + L + + + + V Sbjct 267 RLPGGH------QTVLFSATLPKLLVE-FARAGLTEPVLIRLDVDTKLNEQLKTSFFLVR 319 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 T H+ + V DQ Sbjct 320 EDTKAAV----LLHLLHNVVR----------------------------------PQDQT 341 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 ++F TK + L + Q + SC ++ P RK NL +F G L Sbjct 342 VVFVATKHHAEYLTELLTTQ---------RVSCAHIYSALDPTARKINLAKFTLGKCSTL 392 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 I TD+AARG+DI + VIN + P + + ++HR+GRV RA R G A SLVA ++ Sbjct 393 IVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLD 452 Query 630 VCSSRGKGCYNTR-LKEDGGC 649 + G+ R LKE G Sbjct 453 LHLFLGRSLTLARPLKEPSGV 473 Score = 97.1 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 2/89 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + + + + + +PT IQ ++IP+IL G DV+ A TGSGKT F +P+ + Sbjct 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQ 92 + Q G + T L + Sbjct 158 LKTH--SAQTGARALILSPTRELALQTLK 184 >sp|Q9UTP9|DBP4_SCHPO ATP-dependent RNA helicase dbp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp4 PE=1 SV=1 Length=735 Score = 266 bits (679), Expect = 5e-77, Method: Composition-based stats. Identities = 93/418 (22%), Positives = 163/418 (39%), Gaps = 66/418 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL-PNAPKALIVEPSRELAEQTLNN 305 + +K G + + + K+ + AL++ P+RELA QT Sbjct 71 PSALKGRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFET 130 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQV 364 + + + LIIGG +++ L ++I+V TPGRL + + S + Sbjct 131 LVKIGRLHS---FSAGLIIGGNNYKEEKERLSR-MNILVCTPGRLLQHIDQAVNFDTSGL 186 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 + L+LDEAD +L G+ ++ + + +P Q ++ SAT + VK L+ + Sbjct 187 QMLILDEADRILDMGFRTTLDAIVSSLPV------HRQTMLFSAT-QTKSVKDLARLSLQ 239 Query 425 FPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 P ++ + D S P ++ + V Sbjct 240 NPDFISVHENDTSSTPSNLNQFYLTVPLTE------------------------------ 269 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 K + I+ H + I+F + + + F + G S Sbjct 270 ----------KLDILFGFIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPG-------ISL 312 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 + LHG +K R + +F L CTD+ ARG+D V +VI + P++ Y+HR Sbjct 313 LHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTYIHR 372 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK-EDGGCTIWYNEMQLL 659 +GR R R G A+ L+ +E + S K R+ +DG T N++Q L Sbjct 373 VGRTARYNRSGNALLLLLPSEEAFLKRLES---KKIAVERINVKDGKKTSIRNQLQNL 427 Score = 90.2 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 60/131 (46%), Gaps = 5/131 (4%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+E+ + A++ ++ T+IQ + IP L G D+L AA+TGSGKT AF +P+I+ Sbjct 41 FAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIEN 100 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQ-MNPYDRGSAFA----IGSDGLCCQSREVKE 118 +Y +G T + ++ + R +F+ IG + + + Sbjct 101 LYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGGNNYKEEKERLSR 160 Query 119 WHGCRATKGLM 129 + T G + Sbjct 161 MNILVCTPGRL 171 >sp|Q2TBP1|DDX25_BOVIN ATP-dependent RNA helicase DDX25 OS=Bos taurus OX=9913 GN=DDX25 PE=2 SV=1 Length=483 Score = 259 bits (661), Expect = 5e-77, Method: Composition-based stats. Identities = 102/448 (23%), Positives = 176/448 (39%), Gaps = 107/448 (24%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQVTQTKFLPNAPKALIVEPSR 296 K + L+ P I +SQ A +++ L P+ L + P+ Sbjct 118 NRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALKLFPQCLCLAPTY 177 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDL-VS 355 ELA QT +++ K+ ++ + I G V + IV+GTPG + D Sbjct 178 ELALQTGRVVERMGKFC--VDVQVMYAIRGNRIPRGTDVTK---QIVIGTPGTVLDWCFK 232 Query 356 TGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD 414 ++L+++R VLDEAD ++ QG+ D R+ +P Q+++ SAT Sbjct 233 RKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRALP------SECQMLLFSATFED-S 285 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 V + +E+I+ P + L+ E+ + + V + D Sbjct 286 VWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKD--------------------- 324 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 K + + QAIIFC+T+ + L +Q G Sbjct 325 ------------------KYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDG---- 362 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP- 593 L G+ +R ++RF+ G + LI T+V ARGID+ V V+N LP Sbjct 363 -----HQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPV 417 Query 594 -----DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 + + Y+HRIGR GR + GLA +++ Sbjct 418 NQAEEPDYETYLHRIGRTGRFGKKGLAFNMI----------------------------- 448 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPD 676 +++ LL +I++H N +I Q++P+ Sbjct 449 ---EVDKLPLLMKIQDHFNSSIKQLDPE 473 Score = 64.8 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 64/411 (16%), Positives = 133/411 (32%), Gaps = 76/411 (18%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F E+ + E+ + + M + P+ IQ ++P++L +++ +++G+GKT AF + Sbjct 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V Q + + + C + + Sbjct 156 AMLSRVNALKLFPQ---------CLCLAPTYELALQTGRVVERMGK----FCVDVQVMYA 202 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQ 178 G R +G K ++ G + W + +DL T F + Sbjct 203 IRGNRIPRGTDVTK---QIVIGTPGTV-LDWCFKRKLIDL-TKIRVFVLDEADVMIDTQG 257 Query 179 FDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP---ACVLKN 235 F++ L + + FS +D F + + P L+ Sbjct 258 FEDQSIRIQRA------LPSECQMLLFSATFEDSVWQF-------AERIIPDPNVIKLRK 304 Query 236 AELKFNFGEEEFKF--PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVE 293 EL N + + KD + AL G + +A+I Sbjct 305 EELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIG-------------------QAIIFC 345 Query 294 PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD----IVVGTPGR 349 QT N K + + L+ G + + S+++ D +++ T Sbjct 346 -------QTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITT--- 395 Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 V +++ QV +V D ++Q ++I + GK+ Sbjct 396 ---NVCARGIDVKQVTIVV--NFDLPVNQAEEPDYETYLHRIGRTGRFGKK 441 >sp|Q6C3X7|DBP5_YARLI ATP-dependent RNA helicase DBP5 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP5 PE=3 SV=1 Length=488 Score = 259 bits (661), Expect = 6e-77, Method: Composition-based stats. Identities = 106/469 (23%), Positives = 179/469 (38%), Gaps = 80/469 (17%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 + +K +DLGL + + ++ L + + Sbjct 91 PNSPLYSAKRFEDLGLDENLLKGLYAMKFNKPSKIQEKALPLLLSDPP------HNMIGQ 144 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S++ G + +++ A + + + PSRELA QTL+ + + KK+ D + Sbjct 145 SQSGTGKTGAFSLT---MLSRVDPNLKAVQCICLAPSRELARQTLDVVDEMKKFTD---I 198 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 LI+ R Q + I+VGTPG + L+ +++ V+ VLDEAD ++ Sbjct 199 TTHLIVPESTERGQ----KVTSQILVGTPGSVAGLLQKKQIDAKHVKVFVLDEADNMVDS 254 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 R+ +P T QV++ SAT V L+ K+ P + LK + Sbjct 255 SMGSTCARIKKYLPSST------QVVLFSATFP-ESVLDLAGKMCPNPNEIRLKANELNV 307 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 D + + + E E K+L+ Y++ Sbjct 308 DAITQLYMDC----------------------------------EDGEEKFKMLEELYSM 333 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 I ++IF + + L Q + G LH D ER + + Sbjct 334 LTIA-----SSVIFVAQRSTANALYQRMSKNG---------HKVSLLHSDLSVDERDRLM 379 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHRIGRVGRAERM 612 + F+ G + LI T+V ARGIDI V V+N LP + + Y+HRIGR GR R Sbjct 380 DDFRFGRSKVLISTNVIARGIDIATVSMVVNYDLPTDKNGKPDPETYLHRIGRTGRFGRS 439 Query 613 GLAISLVATEKE-KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 G++IS V E +V + S G T++ D + + + Sbjct 440 GVSISFVHDEASFEVLDSIQQSLG--MTLTQVPTDDIDEVEEIIKKAIK 486 Score = 83.3 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 21/71 (30%), Positives = 43/71 (61%), Gaps = 2/71 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVI 61 F ++G+ + + + M + P+ IQ +++PL+L +++ +++G+GKTGAFS+ ++ Sbjct 101 FEDLGLDENLLKGLYAMKFNKPSKIQEKALPLLLSDPPHNMIGQSQSGTGKTGAFSLTML 160 Query 62 QIVYETLKDQQ 72 V LK Q Sbjct 161 SRVDPNLKAVQ 171 >sp|A5DPU0|MAK5_PICGU ATP-dependent RNA helicase MAK5 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=MAK5 PE=3 SV=1 Length=754 Score = 266 bits (679), Expect = 6e-77, Method: Composition-based stats. Identities = 98/463 (21%), Positives = 168/463 (36%), Gaps = 57/463 (12%) Query 246 EFKFPPKDGFVALSKAPDGYIV---KSQHSGNAQVTQTKFLPNA-------------PKA 289 FK P A+ A G V + SG L P A Sbjct 203 GFKEPTAIQRKAIPLALQGKDVIGKATTGSGKTLAYGIPILERCLAQLESKTNTIKPPTA 262 Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 +I P+RELA Q ++++ + K+ + + I GG++ + Q +L +G I+V TPGR Sbjct 263 MIFAPTRELAHQVVDHMNKIAKFSPLAQNGIVSITGGLSIQKQERLLSHGPSILVATPGR 322 Query 350 LDDLVSTGKLNLSQV----RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD-----GKR 400 +L+ ++L +VLDEAD LL G+ + ++ + + + +R Sbjct 323 CLELME-KSVDLVNRMALTDMIVLDEADRLLQDGHFEEFEKILDMLNKHRPKKTQGVSRR 381 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 Q +V SAT KLS ++ P + + L +L Sbjct 382 WQTLVFSATFSRDLFGKLS---------------NNKPRNKESSFIENDEILSLLNTKLQ 426 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + A E E + Y + + ++F Sbjct 427 FRDRTPAVIDANPKEIVSGKVTEALVECGPSERDLYLYYFLLMYP-GSTLVFANAIDSVK 485 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK----KGDVRFLICTDVAA 576 L + +H +R + LERFK K LI +DVAA Sbjct 486 RLVPFLTNL---------NIPTFSIHSSMIQKQRLRALERFKAAGEKNQTAVLIASDVAA 536 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RG+DI + +V + LP YVHR GR RA + G+++ + ++ + Sbjct 537 RGLDIPNIDHVAHYHLPRSADVYVHRSGRTARAGKEGVSVMFCSPQEASGPFRKLRKLVA 596 Query 637 GCYN--TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI 677 N +R+ + EM L+++++ +N + I Sbjct 597 DSANKGSRMNMHSDVKLLPIEMDLVTQLKPRVNISSKLANSTI 639 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 33/128 (26%), Positives = 55/128 (43%), Gaps = 9/128 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + + + + + PT IQ ++IPL L G DV+ A TGSGKT A+ IP+++ Sbjct 185 SMENVSLSTYTINGLAGCGFKEPTAIQRKAIPLALQGKDVIGKATTGSGKTLAYGIPILE 244 Query 63 IVYETLKDQQEGKKGKTT-IKTGASVLNKWQMNPYDRGSAFAIG--------SDGLCCQS 113 L+ + K T I L ++ ++ + F+ + GL Q Sbjct 245 RCLAQLESKTNTIKPPTAMIFAPTRELAHQVVDHMNKIAKFSPLAQNGIVSITGGLSIQK 304 Query 114 REVKEWHG 121 +E HG Sbjct 305 QERLLSHG 312 >sp|O74393|MAK5_SCHPO ATP-dependent RNA helicase mak5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mak5 PE=1 SV=1 Length=648 Score = 263 bits (672), Expect = 7e-77, Method: Composition-based stats. Identities = 97/418 (23%), Positives = 167/418 (40%), Gaps = 47/418 (11%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV---KSQHSGNAQVTQTKFLPNA----- 286 + E+ + + F P + + +A G+ + SG L + Sbjct 130 SPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNVD 189 Query 287 ---PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 +AL+V P+RELA Q + + K +P +R + I GG+A + Q +L +V Sbjct 190 AKYVQALVVAPTRELAHQICQHFELIK---PSPNIRVMSITGGLAVQKQQRLLNKHPHVV 246 Query 344 VGTPGRLDDLVSTGKL--NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 V TPGRL +++ L N +++ LVLDEAD LL + + + ++++ + + Sbjct 247 VATPGRLWSVINENNLTGNFKKIKCLVLDEADRLLQKSHFEELSKLLEIL--GNPMHTQR 304 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 Q + SAT ++L + + + K + + + V PK Sbjct 305 QTFIFSATFDEGLQQRLKKNMKGN---ITEKYNSPMENMLKEVRFFGKPKF--------- 352 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + A + + E E K Y I + + ++F D Sbjct 353 -------LDANPQSAVASRVLEGLIECAPAEKDLYLYYLIMRYP-GKTMVFANGIEDIKR 404 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + + + LH +R Q+LE+FK L+CTDVAARGIDI Sbjct 405 ITPFLNEL---------KVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAARGIDI 455 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 V +VI+ +P YVHR GR RA G++I + ++ +C K Sbjct 456 PSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSILMCGPKELSQLKRLCYRLKKKIE 513 Score = 96.0 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 30/133 (23%), Positives = 59/133 (44%), Gaps = 4/133 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A++ + PE+ ++ + + P IQ+ IP G D++ A+TGSGKT AF IP+ Sbjct 121 VSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPI 180 Query 61 IQIVYETLKDQ-QEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV--- 116 ++ + + + T + + +++ + GL Q ++ Sbjct 181 LEHCLRNVDAKYVQALVVAPTRELAHQICQHFELIKPSPNIRVMSITGGLAVQKQQRLLN 240 Query 117 KEWHGCRATKGLM 129 K H AT G + Sbjct 241 KHPHVVVATPGRL 253 >sp|Q4WM60|DBP4_ASPFU ATP-dependent RNA helicase dbp4 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp4 PE=3 SV=1 Length=787 Score = 266 bits (680), Expect = 7e-77, Method: Composition-based stats. Identities = 93/452 (21%), Positives = 169/452 (37%), Gaps = 74/452 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 K+ DL L+ + + +++ + + +K G Sbjct 46 FKSFSDLPLSEPTASGLASSHYKTLTDIQSRAISHAL--------KGRDILGAAKTGSGK 97 Query 266 IVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + + + ++ + ALI+ P+RELA Q +++ +Y L+I Sbjct 98 TLAFLVPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKIGRY---HTFSAGLVI 154 Query 325 GGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + +++ L ++I+V TPGR L L T + ++ LVLDEAD +L G+ Sbjct 155 GGKSLKEEQERL-GRMNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQT 213 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL--KGEDSVPDTV 441 ++ + +P K Q ++ SAT + V L+ + P +V + + P + Sbjct 214 VDAIIGHLP------KERQTLLFSAT-QTKKVSDLARLSLQDPEYVAVHETASSATPSKL 266 Query 442 HHVVV--PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 V P+ K D LW Sbjct 267 QQHYVITPLPQKLDILWS------------------------------------------ 284 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I+ + + ++F + + + F G + LHG +K R + Sbjct 285 FIRSNLKSKTMVFLSSGKQVRFVYESFRHLQPG-------IPLMHLHGRQKQGGRLDIVT 337 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 RF + L TDVAARG+D V +VI + P++ Y+HR+GR R ER G A+ + Sbjct 338 RFSQSKHCVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYEREGRAVLFL 397 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 +E+ + +K + +I Sbjct 398 DPSEEEGMLKRLEQKKVPIEKINIKANKQQSI 429 Score = 93.3 bits (230), Expect = 3e-18, Method: Composition-based stats. Identities = 32/120 (27%), Positives = 56/120 (47%), Gaps = 8/120 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS++ + A + + TDIQ+ +I L G D+L AA+TGSGKT AF +PV+ Sbjct 47 KSFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVL 106 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVKE 118 + +Y + +G S + + ++ + + S GL + +KE Sbjct 107 ENLYRKQWAEHDG-----LGALILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKE 161 >sp|P20448|DBP4_YEAST ATP-dependent RNA helicase HCA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HCA4 PE=1 SV=2 Length=770 Score = 266 bits (679), Expect = 7e-77, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 173/449 (39%), Gaps = 76/449 (17%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 +D + +K KDL ++ ++ + ++ + + Sbjct 30 IDEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSL--------QGHDV 81 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 +A +K G + ++ + K+ + ALI+ P+RELA Q + + + Sbjct 82 LAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTS 141 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEAD 373 L+IGG + +L + ++I++GTPGR+ + LN S ++ LVLDEAD Sbjct 142 ---FSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEAD 197 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV---- 429 L G+ ++ + + + Q ++ SAT S V L+ + V Sbjct 198 RCLDMGFKKTLDAIVSTL------SPSRQTLLFSAT-QSQSVADLARLSLTDYKTVGTHD 250 Query 430 ----DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + E S P+T+ + V Sbjct 251 VMDGSVNKEASTPETLQQFYIEVPLAD--------------------------------- 277 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 K + IK H + I+F + + + F + G S + L Sbjct 278 -------KLDILFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPG-------ISLMHL 323 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG +K R + L++F + L TDV ARGID V +V+ V P++ Y+HR+GR Sbjct 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSR 634 R + G ++ ++ ++++ + ++R Sbjct 384 CARYGKKGKSLIMLTPQEQEAFLKRLNAR 412 Score = 99.4 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 37/117 (32%), Positives = 58/117 (50%), Gaps = 8/117 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + E ++ T+IQA+SIP+ L G DVL AA+TGSGKT AF +PVI+ Sbjct 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEK 102 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA---FAIGSDGLCCQSREVK 117 +Y + +G S + M Y+ + S GL ++VK Sbjct 103 LYREKWTEFDG-----LGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVK 154 >sp|A6ZPU3|DBP4_YEAS7 ATP-dependent RNA helicase DBP4 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP4 PE=3 SV=1 Length=770 Score = 266 bits (679), Expect = 9e-77, Method: Composition-based stats. Identities = 91/449 (20%), Positives = 173/449 (39%), Gaps = 76/449 (17%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 +D + +K KDL ++ ++ + ++ + + Sbjct 30 IDEYDPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSL--------QGHDV 81 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 +A +K G + ++ + K+ + ALI+ P+RELA Q + + + Sbjct 82 LAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTS 141 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEAD 373 L+IGG + +L + ++I++GTPGR+ + LN S ++ LVLDEAD Sbjct 142 ---FSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEAD 197 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV---- 429 L G+ ++ + + + Q ++ SAT S V L+ + V Sbjct 198 RCLDMGFKKTLDAIVSTL------SPSRQTLLFSAT-QSQSVADLARLSLTDYKTVGTHD 250 Query 430 ----DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + E S P+T+ + V Sbjct 251 VMDGSVNKEASTPETLQQFYIEVPLAD--------------------------------- 277 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 K + IK H + I+F + + + F + G S + L Sbjct 278 -------KLDILFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPG-------ISLMHL 323 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG +K R + L++F + L TDV ARGID V +V+ V P++ Y+HR+GR Sbjct 324 HGRQKQRARTETLDKFNRAQQVCLFATDVVARGIDFPAVDWVVQVDCPEDVDTYIHRVGR 383 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSR 634 R + G ++ ++ ++++ + ++R Sbjct 384 CARYGKKGKSLIMLTPQEQEAFLKRLNAR 412 Score = 99.4 bits (246), Expect = 3e-20, Method: Composition-based stats. Identities = 37/117 (32%), Positives = 58/117 (50%), Gaps = 8/117 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + E ++ T+IQA+SIP+ L G DVL AA+TGSGKT AF +PVI+ Sbjct 43 FKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEK 102 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA---FAIGSDGLCCQSREVK 117 +Y + +G S + M Y+ + S GL ++VK Sbjct 103 LYREKWTEFDG-----LGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVK 154 >sp|A1DNF9|DBP4_NEOFI ATP-dependent RNA helicase dbp4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp4 PE=3 SV=1 Length=810 Score = 266 bits (681), Expect = 9e-77, Method: Composition-based stats. Identities = 96/462 (21%), Positives = 173/462 (37%), Gaps = 78/462 (17%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 LD+ + FS DL L+ + + +++ + Sbjct 40 LDLKETFKSFS----DLPLSEPTASGLASSHYKTLTDIQSRAISHAL--------KGRDV 87 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYID 314 + +K G + + + ++ + ALI+ P+RELA Q +++ +Y Sbjct 88 LGAAKTGSGKTLAFLVPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKIGRY-- 145 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEAD 373 L+IGG + +++ L ++I+V TPGR L L T + ++ LVLDEAD Sbjct 146 -HTFSAGLVIGGKSLKEEQERL-GRMNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEAD 203 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL-- 431 +L G+ ++ + +P K Q ++ SAT + V L+ + P +V + Sbjct 204 RILDLGFQQTVDAIIGHLP------KERQTLLFSAT-QTKKVSDLARLSLQDPEYVAVHE 256 Query 432 KGEDSVPDTVHHVVV--PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + P + V P+ K D LW Sbjct 257 TASSATPSKLQQHYVITPLPQKLDILWS-------------------------------- 284 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 I+ + + ++F + + + F G + LHG + Sbjct 285 ----------FIRSNLKSKTMVFLSSGKQVRFVYESFRHLQPG-------IPLMHLHGRQ 327 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 K R + RF + L TDVAARG+D V +VI + P++ Y+HR+GR R Sbjct 328 KQGGRLDIVTRFSQSKHCVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARY 387 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 ER G A+ + +E+ + +K + +I Sbjct 388 EREGRAVLFLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSI 429 Score = 94.0 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 33/120 (28%), Positives = 56/120 (47%), Gaps = 8/120 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS++ + A + + TDIQ+ +I L G DVL AA+TGSGKT AF +PV+ Sbjct 47 KSFSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPVL 106 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVKE 118 + +Y + +G S + + ++ + + S GL + +KE Sbjct 107 ENLYRKQWAEHDG-----LGALILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKE 161 >sp|Q9NVP1|DDX18_HUMAN ATP-dependent RNA helicase DDX18 OS=Homo sapiens OX=9606 GN=DDX18 PE=1 SV=2 Length=670 Score = 263 bits (673), Expect = 9e-77, Method: Composition-based stats. Identities = 96/511 (19%), Positives = 188/511 (37%), Gaps = 68/511 (13%) Query 209 GKDLGLAFEIPPHMKNQALFPACV-LKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 G +F ++ N+ A + + + +A +K G + Sbjct 172 GAFEDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTL 231 Query 268 KSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + + +F+P N LI+ P+RELA QT +K+ + + LI+GG Sbjct 232 AFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTY---GLIMGG 288 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 + L NG++I+V TPGRL D + +T ++ LV+DEAD +L G+ + + Sbjct 289 SNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELK 348 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVDLKGE--DSVPDTVH 442 ++ +P R Q ++ SAT + V+ L+ + P +V + + ++ D + Sbjct 349 QIIKLLPT------RRQTMLFSAT-QTRKVEDLARISLKKEPLYVGVDDDKANATVDGLE 401 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V + + +K Sbjct 402 QGYVVCPSEK----------------------------------------RFLLLFTFLK 421 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +++ + ++F + + + + +HG +K ++R +F Sbjct 422 KNRKKKLMVFFSSCMSVKYHYELL---------NYIDLPVLAIHGKQKQNKRTTTFFQFC 472 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA-ERMGLAISLVAT 621 D L+CTDVAARG+DI V +++ PD+ + Y+HR+GR R G A+ ++ Sbjct 473 NADSGTLLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRP 532 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 E+ ++ S+ I ++++ L E L+ + + Sbjct 533 EELGFLRYLKQSK-VPLSEFDFSWSKISDI-QSQLEKLIEKNYFLHKSAQEAYKSYIRAY 590 Query 682 DEFDGKVTYGQKRAAGGGSYKGHVDILAPTV 712 D K + + P V Sbjct 591 DSHSLKQIFNVNNLNLPQVALSFGFKVPPFV 621 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 30/97 (31%), Positives = 50/97 (52%), Gaps = 7/97 (7%) Query 2 AAFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 +F+ + V +A++EM + T+IQ +SI +L G D+L AA+TGSGKT AF IP Sbjct 177 TSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIP 236 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 ++++ + + G T S + M + Sbjct 237 AVELIVKLRFMPRNG-----TGVLILSPTRELAMQTF 268 >sp|Q54Q94|DDX10_DICDI Probable ATP-dependent RNA helicase ddx10 OS=Dictyostelium discoideum OX=44689 GN=ddx10 PE=3 SV=1 Length=878 Score = 268 bits (684), Expect = 1e-76, Method: Composition-based stats. Identities = 93/460 (20%), Positives = 172/460 (37%), Gaps = 70/460 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 KDL ++ + ++ A L + +K G + Sbjct 143 FKDLPISQLTLKALTESKFLKLTDIQRASLPHTL--------CGRDILGAAKTGSGKTLS 194 Query 269 SQHSGNAQVTQTKF-LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + + ++ + A+++ P+RELA Q + +K KY LIIGG Sbjct 195 FILPILETLWRNRWGRDDGIGAIVLSPTRELAIQIFDVLKAVGKY---HTFSAGLIIGGR 251 Query 328 AARDQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + + + N ++I++ TPGRL + T + S ++ LVLDEAD +L G+S +N Sbjct 252 NVQQEKDKI-NAMNILIATPGRLLQHMDETYGFDCSNLKILVLDEADRILDLGFSKCLNS 310 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHV 444 + +P + Q ++ SAT + ++ L+ + P ++ + +D + P + Sbjct 311 IVENLP------RERQTLLFSAT-QTKSIRDLARLSLQEPEYISVYEKDITTTPQNLTQT 363 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + + +K IK H Sbjct 364 LCVIPLE----------------------------------------MKLNMLFSFIKTH 383 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + I+F + + F G + LHG K R + E F K Sbjct 384 LTSKIIVFFASCKQVRFAHETFKLLNPGT-------TLFPLHGKMKQWTRLEVFEDFCKK 436 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L TD+AARG+D V +VI V PD+ + Y+HR+GR R + G +I+++ ++ Sbjct 437 KAGTLFATDIAARGLDFPAVEWVIQVDCPDDIETYIHRVGRTARNDAPGQSITILLPSEK 496 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 ++ + + +I LSE + Sbjct 497 DGMVNLMEKQKMKFEILEPNPEKLVSIDSKLSSFLSEKTD 536 Score = 91.7 bits (226), Expect = 1e-17, Method: Composition-based stats. Identities = 32/120 (27%), Positives = 56/120 (47%), Gaps = 8/120 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++ + +A+ E +L TDIQ S+P L G D+L AA+TGSGKT +F +P++ Sbjct 141 TDFKDLPISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFILPIL 200 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGS---AFAIGSDGLCCQSREVKE 118 + ++ + +G S + + +D + S GL R V++ Sbjct 201 ETLWRNRWGRDDG-----IGAIVLSPTRELAIQIFDVLKAVGKYHTFSAGLIIGGRNVQQ 255 >sp|Q4WMS3|MAK5_ASPFU ATP-dependent RNA helicase mak5 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=mak5 PE=3 SV=2 Length=777 Score = 265 bits (678), Expect = 1e-76, Method: Composition-based stats. Identities = 108/495 (22%), Positives = 191/495 (39%), Gaps = 55/495 (11%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAP-DGYIV 267 LGL+ EI + ++ A + + G +A + Y+ Sbjct 206 LGLSPEILTGLSKMKFGSPTSVQEACIPQILEGHDVIGKASTGSGKTLAFGIPILEHYLE 265 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 K + +AQ Q + P ALI+ P+RELA Q +I + R L+ GG+ Sbjct 266 KKRDDISAQKEQMSEKDSTPIALILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGL 325 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFI 384 + + Q +L G DIV+GTPGR+ +++STG+ + Q++FLV+DEAD LLS+G+ + Sbjct 326 SVQKQQRLLS-GADIVIGTPGRVWEILSTGQGLIRKMQQIKFLVVDEADRLLSEGHFKEV 384 Query 385 NRMHNQIPQV----------------TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 + N + +V + Q +V SAT H +KL+ K Sbjct 385 EEILNSLDRVEDGEVPDGEDQASEEESDPSSERQTLVFSATFHRDLQQKLAGK------- 437 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 ++ D L ++L + + ++ N E E Sbjct 438 ---------RKWTRGDIMDKKESMDYLLQKLNFREEKPKFIDMNPISQMADNLKEGIVEC 488 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + K + + H + ++F + + Q + LH Sbjct 489 GAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRR---------LTKLLQTLQLPALALHSS 539 Query 549 RKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 R +++ERF LI TDVAARG+DI G+ VI+ P YVHR GR Sbjct 540 MAQKARLRSVERFSSPSSDPSTILIATDVAARGLDIKGIDLVIHYHAPRTADTYVHRSGR 599 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 RA G ++ + ++ + + N + + + +++S ++ Sbjct 600 TARAGASGKSVIICGPDEMVGVVRLAAKVHANMANGKKLPLESLEL---DRRVVSRVKPR 656 Query 666 LNCTISQVEPDIKVP 680 ++ + +I Sbjct 657 VSLASRITDANIAKE 671 Score = 118 bits (295), Expect = 4e-26, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 68/160 (43%), Gaps = 14/160 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PEI + +M + PT +Q IP IL G DV+ A TGSGKT AF IP+ Sbjct 200 VSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQILEGHDVIGKASTGSGKTLAFGIPI 259 Query 61 IQIVYETLKD------QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 ++ E +D +Q +K T I S + + G+ + Sbjct 260 LEHYLEKKRDDISAQKEQMSEKDSTPIALILSPTRELAHQLSKHIGELIAQAPGVNARIA 319 Query 115 EVKEWHGCRATKGLMKGK--------HYYEVSCHDQGLCR 146 + + + L+ G +E+ QGL R Sbjct 320 LLTGGLSVQKQQRLLSGADIVIGTPGRVWEILSTGQGLIR 359 >sp|Q9DF35|DD21A_XENLA Nucleolar RNA helicase 2-A OS=Xenopus laevis OX=8355 GN=ddx21-a PE=2 SV=2 Length=759 Score = 265 bits (677), Expect = 1e-76, Method: Composition-based stats. Identities = 100/410 (24%), Positives = 168/410 (41%), Gaps = 57/410 (14%) Query 232 VLKNAELKFNFGEEEFKFPPK---DGFVALSKAPDGYIVKSQHSGNAQVTQTKF---LPN 285 L+ + + F + F V ++ G ++ + + Sbjct 193 NLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGTGKTFSFAIPLVEKLNEDQQPLARGR 252 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ +I+ P+RELA Q N I+ K KL+ GG + Q+ +++G+D +VG Sbjct 253 APRVIILTPTRELAIQITNEIRSITK-----KLKVSCFYGGTPYQQQVFAIKDGIDFLVG 307 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ DLV +L+L+ ++ +VLDE D + G+S+ + + + + + + Q ++ Sbjct 308 TPGRVRDLVQNYRLDLTTLKHVVLDEVDMMFDMGFSEQVEEILSVRYKADPE-ENPQTLL 366 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT + + +++K M + K + Sbjct 367 FSATCPDW-MYNMAKKYMRK--------------------------------QFEKIDLI 393 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 T S+ +L V + + IIFC +K++ L Sbjct 394 GHRSQKAATTVEHLAIECTRSQKAAVLGDLVQVYSGSH---GKTIIFCDSKLEAHTLA-- 448 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + S LHGD + ER+ L+ F++G LI T+VAARG+DI V Sbjct 449 -------TSCGSLKQSAKSLHGDLQQKEREVVLKGFRQGTFEVLIATNVAARGLDIPEVD 501 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 V+ + P E YVHR GR GRA R G+ ISL + +V S G Sbjct 502 LVVLYSAPKEADAYVHRSGRTGRAGRTGVCISLYEPWERHYLRNVERSTG 551 Score = 82.9 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 54/143 (38%), Gaps = 10/143 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + E + ++ IQ+++ G DV++ A TG+GKT +F+IP+++ Sbjct 181 FSKFPLSKETIKNLQAKGVSYLFPIQSKTFHTAYSGKDVVVQARTGTGKTFSFAIPLVEK 240 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + E DQQ +G+ + + + + + C + + Sbjct 241 LNE---DQQPLARGRAPRVIILTPTRELAIQITNEIRSITKKLKVSCFYGGTPYQ----Q 293 Query 124 ATKGLMKGKHYYEVSCHDQGLCR 146 + G + G R Sbjct 294 QVFAIKDGI---DFLVGTPGRVR 313 >sp|Q9QY16|DDX25_RAT ATP-dependent RNA helicase DDX25 OS=Rattus norvegicus OX=10116 GN=Ddx25 PE=1 SV=2 Length=483 Score = 258 bits (658), Expect = 2e-76, Method: Composition-based stats. Identities = 103/448 (23%), Positives = 175/448 (39%), Gaps = 107/448 (24%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQVTQTKFLPNAPKALIVEPSR 296 K + L+ P I +SQ A + + L P+ L + P+ Sbjct 118 NRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLNRVNALELFPQCLCLAPTY 177 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDL-VS 355 ELA QT +++ K+ + + I G V + IV+GTPG + D Sbjct 178 ELALQTGRVVERMGKFC--VDVEVMYAIRGNRIPRGTDVTK---QIVIGTPGTVLDWCFK 232 Query 356 TGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD 414 ++L+++R VLDEAD ++ QG+SD R+ +P Q+++ SAT Sbjct 233 RKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALP------SECQMLLFSATFED-S 285 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 V + +E+I+ P + L+ E+ + + V + D Sbjct 286 VWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKD--------------------- 324 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 K + + QAIIFC+T+ + L +Q G Sbjct 325 ------------------KYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDG---- 362 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP- 593 L G+ +R ++RF+ G + LI T+V ARGID+ V V+N LP Sbjct 363 -----HQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPV 417 Query 594 -----DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 + + Y+HRIGR GR + GLA +++ Sbjct 418 NQSEEPDYETYLHRIGRTGRFGKKGLAFNMI----------------------------- 448 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPD 676 +++ LL +I++H N +I Q++P+ Sbjct 449 ---EVDKLPLLMKIQDHFNSSIKQLDPE 473 Score = 64.8 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 30/168 (18%), Positives = 67/168 (40%), Gaps = 8/168 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F E+ + E+ + + M + P+ IQ ++P++L +++ +++G+GKT AF + Sbjct 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA--FAIGSDGLCCQSREV 116 ++ V Q T + +M + +AI + + + Sbjct 156 AMLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTDVT 215 Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFG 164 K+ T G + ++ D RV + +A + + T F Sbjct 216 KQI--VIGTPGTVLD-WCFKRKLIDLTKIRV-FVLDEADVMIDTQGFS 259 >sp|A7TEG8|MAK5_VANPO ATP-dependent RNA helicase MAK5 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=MAK5 PE=3 SV=1 Length=763 Score = 265 bits (677), Expect = 2e-76, Method: Composition-based stats. Identities = 116/535 (22%), Positives = 209/535 (39%), Gaps = 60/535 (11%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 L+F + +++ + E+ + + G + Sbjct 199 LSFTTLHGLTKLGFNKPTLIQEEAIPMALKGED--------IMGKASTGSGKTLAYGIPI 250 Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI-DNPKLRELLIIGGVAARDQ 332 ++ ++K AP LI P+RELA+Q +++++ I D L + GG++ + Q Sbjct 251 IEKLMKSKSN-TAPIGLIFTPTRELAKQVTDHLRKIASLIVDKSPHAILSLTGGLSIQKQ 309 Query 333 LSVLENGVD--IVVGTPGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRM 387 +L+ IVV TPGR +L+ K SQ+ LVLDEAD LL G+ D + Sbjct 310 ERLLKYEGSGRIVVATPGRFLELIEKDKTLVERFSQISTLVLDEADRLLQDGHFDEFENI 369 Query 388 HNQIPQVTSDGK-RLQVIVCSATLHSFDVKKLSE---KIMHFPTWVDLKGEDSVPDTVHH 443 + + + + K Q ++ SAT + KLS K M P+ K E+ + + H Sbjct 370 LKYLGRESKNRKHNWQTMIFSATFATDLFDKLSHASWKNMKTPS----KNENEMEIVLKH 425 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 ++ ++ K+ + + A + + E E + + + Sbjct 426 LMTKIHFKSKPIL------------IDANPEDKVSSQIKESLIECAATERDLFCYYFVSM 473 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + + +IFC L Y SC +H R +NLER+++ Sbjct 474 YP-GKTLIFCNAIDSVKKLTAYLNNL---------NISCFQIHSSMTQKNRLRNLERYQQ 523 Query 564 --------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 G L+ +DVAARG+DI G+ +VI+ LP Y+HR GR RA G++ Sbjct 524 QSEKNKILGKPTVLVGSDVAARGLDIPGIQHVIHYHLPRTADVYIHRSGRTARANNEGVS 583 Query 616 ISLVATEK-----EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + + + E+ K+ + + GK + K T+ + +LS+++E Sbjct 584 VMICSPEEAMGPLRKLRKTLANKSGKDIIMGKKKWQKTVTMLPIDDTILSQLKERSRLAS 643 Query 671 SQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTS 725 + D+ T+ +K A G D + T +K +T Sbjct 644 ELADHDL--ASSSLQKDDTWMKKAAEDLGVDIDSDDEIKDTFLAKNINKKRNKTL 696 Score = 91.7 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 42/96 (44%), Gaps = 7/96 (7%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + + ++ + PT IQ E+IP+ L G D++ A TGSGKT A+ IP+I+ + ++ Sbjct 199 LSFTTLHGLTKLGFNKPTLIQEEAIPMALKGEDIMGKASTGSGKTLAYGIPIIEKLMKS- 257 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 K I + + D A Sbjct 258 ------KSNTAPIGLIFTPTRELAKQVTDHLRKIAS 287 >sp|Q80Y44|DDX10_MOUSE Probable ATP-dependent RNA helicase DDX10 OS=Mus musculus OX=10090 GN=Ddx10 PE=1 SV=2 Length=875 Score = 266 bits (681), Expect = 2e-76, Method: Composition-based stats. Identities = 101/536 (19%), Positives = 197/536 (37%), Gaps = 76/536 (14%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 +++++ D L+ + ++ ++ + Sbjct 63 INVNEITRF-----SDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLAL--------QGKDV 109 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 + +K G + + + ++ + LI+ P+RELA QT +++ K Sbjct 110 LGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGK--- 166 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQVRFLVLDEAD 373 N LIIGG + + + N ++I+V TPGRL + T + + ++ LVLDEAD Sbjct 167 NHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDEAD 225 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP--TWVDL 431 +L G++D +N + +P K+ Q ++ SAT + VK L+ + P WV Sbjct 226 RILDMGFADTMNAIIENLP------KKRQTLLFSAT-QTKSVKDLARLSLKDPEYVWVHE 278 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 K + S P T+ + Sbjct 279 KAKYSTPATLEQNYIICELHQ--------------------------------------- 299 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K ++ H ++I+F + + L + F + G S + LHG ++ Sbjct 300 -KISVLFSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPG-------ISILALHGRQQQ 351 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + F + L TD+AARG+D V +V+ P++ Y+HR GR R + Sbjct 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 G A+ ++ +E+ + ++ + + L++ ++ Sbjct 412 DGEALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQR 471 Query 672 QVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFL 727 I+ D +V K + + +AP ++ L LEK+ T + Sbjct 472 CFVSYIRSVYLMKDKEVFNVSKLPITEYALSLGL-AVAPRIRFLQKLEKQPSTELV 526 Score = 95.2 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 33/120 (28%), Positives = 56/120 (47%), Gaps = 8/120 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS+ + + + ++E + L T+IQ ++I L L G DVL AA+TGSGKT AF +PV Sbjct 68 ITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPV 127 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD---GLCCQSREVK 117 ++ +Y +G S + ++ D GL +++K Sbjct 128 LEALYRLQWTSTDG-----LGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLK 182 >sp|Q6CRF4|DBP4_KLULA ATP-dependent RNA helicase DBP4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP4 PE=3 SV=1 Length=770 Score = 265 bits (676), Expect = 2e-76, Method: Composition-based stats. Identities = 89/435 (20%), Positives = 166/435 (38%), Gaps = 74/435 (17%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +DL ++ + +K A ++ + + + + +K G + Sbjct 43 FQDLPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHD--------VLGAAKTGSGKTLA 94 Query 269 SQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 ++ + K+ + ALI+ P+RELA Q + + K+ L+IGG Sbjct 95 FLIPVIEKLYREKWTDMDGLGALIISPTRELAMQIYEVLSKIGKH---TTFSAGLVIGGK 151 Query 328 AARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + + ++I++GTPGR L + N S ++ LVLDEAD L G+ ++ Sbjct 152 DVTFEKERISR-INILIGTPGRILQHMDQAVGFNTSNLQLLVLDEADRCLDMGFKRTLDA 210 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV------DLKGEDSVPDT 440 + N +P Q ++ SAT S + L+ + V + + P++ Sbjct 211 IINNLPAS------RQTLLFSAT-QSQSLDDLARLSLTDYKQVGTMEVLNANSSSATPES 263 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + + V K + Sbjct 264 LQQSYIEVPLPD----------------------------------------KLDILFSF 283 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 IK H + I+F + + + F + G S + LHG +K R + L++ Sbjct 284 IKSHLKSKLIVFLSSSKQVHFVYETFRKLQPG-------ISLMHLHGRQKQTARTETLDK 336 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F + L TDV ARGID V +VI V P++ Y+HR+GR R + G ++ ++ Sbjct 337 FSRAQHVCLFSTDVVARGIDFPSVDWVIQVDCPEDVDTYIHRVGRAARFGKEGKSLIMLT 396 Query 621 TEKEKVWYHVCSSRG 635 E+E+ + ++ Sbjct 397 PEEEEGFLKRLKTKN 411 Score = 102 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 35/104 (34%), Positives = 52/104 (50%), Gaps = 5/104 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + ++E ++ T+IQ ESIPL L G DVL AA+TGSGKT AF IPVI+ Sbjct 43 FQDLPISEQTLKGLKEAAFIKLTEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIEK 102 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 +Y +G S + M Y+ S + Sbjct 103 LYREKWTDMDG-----LGALIISPTRELAMQIYEVLSKIGKHTT 141 >sp|Q8SQM5|IF4A_ENCCU ATP-dependent RNA helicase eIF4A OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=TIF1 PE=1 SV=1 Length=425 Score = 255 bits (652), Expect = 2e-76, Method: Composition-based stats. Identities = 96/424 (23%), Positives = 176/424 (42%), Gaps = 60/424 (14%) Query 232 VLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP----- 284 LK LK ++ G E F K + D +G L Sbjct 44 GLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQICDMS 103 Query 285 -NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 + + L++ +RE+A Q + ++ R L+ GG LE IV Sbjct 104 QDVTQILVLASTREIAAQNAARFEDLGCFMGA---RVALLSGGSPIAADKVALEKKPHIV 160 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 VGTPGR++ +++ +L++ ++ V+DEAD +L G+ + + + +I ++ +Q+ Sbjct 161 VGTPGRVEHMININELSMDNIKLFVIDEADEMLKAGFQEQVKSIFRRI----TNKDEVQI 216 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SAT +++ +SE+I+ P +DL+ D + + + + Sbjct 217 AMFSATYDEEELR-VSEEILINPVIIDLRYNDQTLKGIRQYFIDLRKEPP---------- 265 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 E + K ++ ++ Q+I+F +K D + Sbjct 266 ------------------FRKGREDYLLPKLVTLYDIFRKQRLGQSIVFINSKEDARIVY 307 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + I+ H++ C + + ER++ L RF+ G R LI + + +RGIDI Sbjct 308 DWLIR---------HEWECELISAELTQAERERTLNRFRGGTGRCLISSGLLSRGIDIQN 358 Query 584 VPYVINVTLPD--EKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 + V + +P K Y+HRIGR GR R G+AI++V + K + + YNT Sbjct 359 LSVVFCLDVPSFERKSTYIHRIGRSGRYGRKGIAINIVYEHELKNLKAI-----ERFYNT 413 Query 642 RLKE 645 +KE Sbjct 414 TIKE 417 Score = 82.9 bits (203), Expect = 2e-15, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + + G+ ++ + + + + P+ IQ +I I+ G D+ A++G+GKTGAF++ +Q Sbjct 39 TWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKTGAFAVAALQ 98 Query 63 IV 64 I Sbjct 99 IC 100 >sp|A1DMT9|MAK5_NEOFI ATP-dependent RNA helicase mak5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=mak5 PE=3 SV=1 Length=777 Score = 265 bits (676), Expect = 2e-76, Method: Composition-based stats. Identities = 106/495 (21%), Positives = 191/495 (39%), Gaps = 55/495 (11%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAP-DGYIV 267 LGL+ EI + ++ A + + G +A + Y+ Sbjct 206 LGLSPEILTGLSKMKFASPTSVQEACIPQILEGHDVIGKASTGSGKTLAFGIPILEHYLE 265 Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 K + +A+ + + P ALI+ P+RELA Q +I + R L+ GG+ Sbjct 266 KKRDDISAEKEKKSEKDSTPIALILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGL 325 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFI 384 + + Q +L G DIV+GTPGR+ +++STG+ + Q++FLV+DEAD LLS+G+ + Sbjct 326 SVQKQQRLLS-GADIVIGTPGRVWEILSTGQGLIRKMQQIKFLVVDEADRLLSEGHFKEV 384 Query 385 NRMHNQIPQV----------------TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 + N + +V + Q +V SAT H +KL+ K Sbjct 385 EEILNALDRVEDGEVPGGENQASEEESDPSSERQTLVFSATFHRDLQQKLAGKG------ 438 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 V+ D L ++L + + ++ N E E Sbjct 439 ----------KWTGGDVMDKKESMDYLLQKLNFREEKPKFIDMNPISQMADNLKEGIVEC 488 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + K + + H + ++F + + Q + LH Sbjct 489 GAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRR---------LTKLLQTLQLPALALHSS 539 Query 549 RKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 R +++ERF L+ TDVAARG+DI G+ VI+ P YVHR GR Sbjct 540 MAQKARLRSVERFSSPSSDPSTILVATDVAARGLDIKGINLVIHYHAPRTADTYVHRSGR 599 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 RA G ++ + ++ + + N + + + +++S ++ Sbjct 600 TARAGASGKSVIICGPDEMVGVVRLAAKVHANMANGKKLPLESLEL---DRRVVSRVKPR 656 Query 666 LNCTISQVEPDIKVP 680 ++ + +I Sbjct 657 VSLASRITDANIAKE 671 Score = 117 bits (293), Expect = 6e-26, Method: Composition-based stats. Identities = 41/160 (26%), Positives = 69/160 (43%), Gaps = 14/160 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PEI + +M + PT +Q IP IL G DV+ A TGSGKT AF IP+ Sbjct 200 VSAWDSLGLSPEILTGLSKMKFASPTSVQEACIPQILEGHDVIGKASTGSGKTLAFGIPI 259 Query 61 IQIVYETLKD------QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 ++ E +D +++ +K T I S + + G+ + Sbjct 260 LEHYLEKKRDDISAEKEKKSEKDSTPIALILSPTRELAHQLSKHIGELIAQAPGVNARIA 319 Query 115 EVKEWHGCRATKGLMKGK--------HYYEVSCHDQGLCR 146 + + + L+ G +E+ QGL R Sbjct 320 LLTGGLSVQKQQRLLSGADIVIGTPGRVWEILSTGQGLIR 359 >sp|O60173|DBP7_SCHPO ATP-dependent RNA helicase dbp7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp7 PE=3 SV=1 Length=709 Score = 263 bits (672), Expect = 3e-76, Method: Composition-based stats. Identities = 99/458 (22%), Positives = 178/458 (39%), Gaps = 46/458 (10%) Query 206 SKNGKDLGLAFEIPPHMKN-QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 + N + L ++ H+ N + +++ L ++ + ++ G Sbjct 137 TTNFAGVQLDTQLADHLNNKMNISAPTAIQSCCLPALLNTDDKDAFIE------AQTGSG 190 Query 265 YIVKSQHSGNAQVTQTKFLPN----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + ++ + + A+I+ P+REL +Q N + + + Sbjct 191 KTLAYLLPIVQRLIRLPKNLHTRTSGIYAVIMAPTRELCQQIYNVANKLNNNPLSHWIVS 250 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQG 379 +IGG + + + + GV+I++GTPGRL D + +T L++SQVR++VLDE D L+ G Sbjct 251 CNVIGGEKKKSEKARIRKGVNILIGTPGRLADHLENTEALDVSQVRWVVLDEGDRLMDMG 310 Query 380 YSDFINRMHNQIPQVTSDGK-------RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL- 431 + + + ++ + + +S K R ++CSAT+ VK+LS+ + ++ Sbjct 311 FEETLTKILSYLESQSSIIKKDLSIPSRKVTMLCSATMKDT-VKRLSDSALKDALYLKSS 369 Query 432 ------KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 G P+ + V V PK RL + ++S + Sbjct 370 IVEETNDGYSQAPEQLLQRYVVVPPKL-RLVSLVALLRSHVRSYKKIIIFLSCSDSVDFH 428 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 EA + + + K D E I G + L Sbjct 429 FEAFRCAINADEMEEAVKEKPDS--------------EGDIISNAPALRIDGKS-NVYRL 473 Query 546 HGDRKPHERKQNLERFKKGD---VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 HG R L F + L+CTDVAARG+D+ V V+ P +Y+HR Sbjct 474 HGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDDYLHR 533 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 IGR RA G AI + ++ + + SS Sbjct 534 IGRTARAGHNGAAIMFLLPKESEYINLLKSSVSANILE 571 Score = 73.6 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 10/135 (7%) Query 2 AAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLIL--GGGDVLMAAETGSGKTGAFSI 58 F+ + + ++A + +M+ PT IQ+ +P +L D + A+TGSGKT A+ + Sbjct 138 TNFAGVQLDTQLADHLNNKMNISAPTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLL 197 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS-----DGLCCQS 113 P++Q + K+ + + + Y+ + Sbjct 198 PIVQRLIRLPKNLHT--RTSGIYAVIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIG 255 Query 114 REVKEWHGCRATKGL 128 E K+ R KG+ Sbjct 256 GEKKKSEKARIRKGV 270 >sp|Q8X0X2|DBP5_NEUCR ATP-dependent RNA helicase dbp-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-5 PE=3 SV=1 Length=483 Score = 257 bits (656), Expect = 3e-76, Method: Composition-based stats. Identities = 105/452 (23%), Positives = 179/452 (40%), Gaps = 86/452 (19%) Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGE--------EEFKF 249 I++ KN ++ + + L+ L + K Sbjct 41 IEESQSNLVKNEYEVEIKLSDLQNDTESPLYSVSSFDELGLPEAVNRGLLAINFKKPSKV 100 Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQ-------VTQTKF-LPNAPKALIVEPSRELAEQ 301 K + LS P I +SQ +++ P+ P+AL++ PSRELA Q Sbjct 101 QEKCLPLMLSDPPRNMIAQSQSGTGKTAAFVLTVLSRIDLSKPHQPQALLLAPSRELARQ 160 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL 361 ++ ++ +N + E I G ++ + +VVGTPG + DLV + ++ Sbjct 161 IQTVVQTIGQFCEN-LIVEAAIPGAISRETGVRG-----SVVVGTPGTVMDLVKRRQFDI 214 Query 362 SQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 SQ++ LV+DEAD +L QG D R+ N +P K +Q+++ SAT V + +E Sbjct 215 SQLKVLVIDEADNMLDQQGLGDQCVRVKNMLP------KTIQILLFSATFPD-KVLRFAE 267 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 + + LK ++ + + + + D+ Sbjct 268 RFAPNANQMKLKHKELTVKGISQMFMDCPTEKDK-------------------------- 301 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 IL Y + I ++IF RT+ + +++ G Sbjct 302 --------YDILCKLYGLMTI-----GSSVIFVRTRETANEIQKRMEADG---------H 339 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------- 593 LHG + R L+ F+ G + LI T+V ARGID+ V VIN +P Sbjct 340 KVSALHGAYEGQSRDVLLDEFRSGRSKVLITTNVLARGIDVSSVSMVINYDIPMKGPGER 399 Query 594 -DEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + + Y+HRIGR GR R+G++IS V + Sbjct 400 EPDAETYLHRIGRTGRFGRVGVSISFVHDRRS 431 Score = 79.0 bits (193), Expect = 5e-14, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 54/133 (41%), Gaps = 13/133 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 +++F E+G+ + + + +++ P+ +Q + +PL+L +++ +++G+GKT AF + Sbjct 73 VSSFDELGLPEAVNRGLLAINFKKPSKVQEKCLPLMLSDPPRNMIAQSQSGTGKTAAFVL 132 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQS---RE 115 V+ + + K + + + L ++ Sbjct 133 TVLSRI--------DLSKPHQPQALLLAPSRELARQIQTVVQTIGQFCENLIVEAAIPGA 184 Query 116 VKEWHGCRATKGL 128 + G R + + Sbjct 185 ISRETGVRGSVVV 197 >sp|Q6FPT7|DBP4_CANGA ATP-dependent RNA helicase DBP4 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP4 PE=3 SV=1 Length=765 Score = 264 bits (675), Expect = 3e-76, Method: Composition-based stats. Identities = 90/448 (20%), Positives = 168/448 (38%), Gaps = 67/448 (15%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 D+ F K DL ++ + + ++ + + Sbjct 33 YDVKNNKAVFFK---DLPISKSTLKGLNEASFIKMTDIQRDSIVTSL--------QGHDV 81 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 +K G + ++ + ++ + ALI+ P+RELA Q + + + Sbjct 82 FGTAKTGSGKTLAFLVPVLEKLYRERWTEFDGLGALIISPTRELAMQIYEVLVKIGSH-- 139 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEAD 373 + L+IGG +L + ++I++GTPGR L + LN S ++ LVLDEAD Sbjct 140 -TQFSAGLVIGGKDVNFELERIAK-INILIGTPGRILQHMDQAVGLNTSNLQMLVLDEAD 197 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 L G+ ++ + +P Q ++ SAT S + L+ + + Sbjct 198 RCLDMGFQKTLDAIVGNLP------PDRQTLLFSAT-QSQSISDLARLSLTDYKKIGT-- 248 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 + + + L +S+I D K Sbjct 249 ------------IDSSEDGPATPKTLQQSYIIADLAD----------------------K 274 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + IK H + I+F + + + F + G S + LHG +K Sbjct 275 LDVLYSFIKSHLKTKMIVFFSSSKQVHFVYETFRKMQPG-------ISLLHLHGRQKQRA 327 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + L++F + L TDV ARGID V +VI V P++ Y+HR+GR R + G Sbjct 328 RTETLDKFFRAQQVCLFATDVVARGIDFPAVDWVIQVDCPEDVDTYIHRVGRAARYGKKG 387 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNT 641 ++ ++ ++E + + + + T Sbjct 388 RSLIILTPQEEAFLTRMAAKKIEPGKLT 415 Score = 92.1 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 28/101 (28%), Positives = 45/101 (45%), Gaps = 5/101 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + E ++ TDIQ +SI L G DV A+TGSGKT AF +PV++ Sbjct 43 FKDLPISKSTLKGLNEASFIKMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLEK 102 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 +Y + +G S + M Y+ Sbjct 103 LYRERWTEFDG-----LGALIISPTRELAMQIYEVLVKIGS 138 >sp|Q39189|RH7_ARATH DEAD-box ATP-dependent RNA helicase 7 OS=Arabidopsis thaliana OX=3702 GN=RH7 PE=1 SV=2 Length=671 Score = 262 bits (669), Expect = 3e-76, Method: Composition-based stats. Identities = 109/462 (24%), Positives = 190/462 (41%), Gaps = 67/462 (15%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 I++S +G A+ + +P L++ P+RELA+Q F Y + L + G Sbjct 154 ILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQV---AADFDAYGGSLGLSSCCLYG 210 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G + Q L+ GVDIVVGTPGR+ D + L+ S ++F VLDEAD +L G+ + + Sbjct 211 GDSYPVQEGKLKRGVDIVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVE 270 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM-HFPTWVDLKGEDSVP--DTVH 442 + ++ D ++Q ++ SATL S+ VK +S + + +DL G D + ++V Sbjct 271 LILGKV----EDSTKVQTLLFSATLPSW-VKNISNRFLKRDQKTIDLVGNDKMKASNSVR 325 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 H+ +P N + + + D + + Sbjct 326 HIAIPCN--------KAAMARLIPDIISCYSS---------------------------- 349 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 Q IIF TK+ L LHG+ +R+ L F+ Sbjct 350 ---GGQTIIFAETKVQVSELSGLLD-------------GSRALHGEIPQSQREVTLAGFR 393 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G L+ T+VAARG+DI+ V +I P E + Y+HR GR GRA G+A++L + Sbjct 394 NGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSR 453 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGG--CTIWYNEMQLLSEIEEHLNCTISQVEPDIKVP 680 K V + G + + + + + ++ + + + ++ + Sbjct 454 KSSVS-RIEKEAGIKFEHLAAPQPDEIARSGGMEAAEKVKQVCDSVVPAFLEAAKEL-LE 511 Query 681 VDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEA 722 +V + A G + L +++ L EA Sbjct 512 TSGLSAEVLLAKALAKTAGFTEIKKRSLLTSMENYVTLHLEA 553 Score = 69.8 bits (169), Expect = 5e-11, Method: Composition-based stats. Identities = 20/108 (19%), Positives = 43/108 (40%), Gaps = 1/108 (1%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 S+ + + + ++ IQA + ++L G D++ A TG GKT AF +P+++ + Sbjct 99 SKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESL 158 Query 65 YE-TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 K +++ G++ + A+ C Sbjct 159 VNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSC 206 >sp|A7TTT5|DBP2_VANPO ATP-dependent RNA helicase DBP2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP2 PE=3 SV=1 Length=441 Score = 255 bits (651), Expect = 4e-76, Method: Composition-based stats. Identities = 85/369 (23%), Positives = 147/369 (40%), Gaps = 67/369 (18%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + +K + ++ + ++ G + G + Sbjct 124 VLEEVKAEGFEKPTGIQCQGWPMALS--------GRDMIGVAATGSGKTLSYCLPGIVHI 175 Query 278 TQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 L + P L++ P+RELA Q K+ + ++R + GGV Q+ Sbjct 176 NAQPLLSPGDGPIVLVLAPTRELAVQIQKEC---SKFGSSSRIRNSCVYGGVPRGQQIRE 232 Query 336 LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 L G +IV+ TPGRL D++ GK NL +V +LVLDEAD +L G+ I ++ +QI Sbjct 233 LSRGAEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI---- 288 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDR 454 Q ++ SAT +VK+L+ ++ P V + E S + +V Sbjct 289 --RPDRQTLMWSATWPK-EVKQLAHDYLNDPIQVQIGSLELSASHNITQLV--------- 336 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 E+ S+ K + + E K + ++F Sbjct 337 ----------------------------EVVSDFEKRDRLLKHLETASEDKDSKILVFAS 368 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK CD + +Y + G + + +HGD+ ER L+ F++G ++ TDV Sbjct 369 TKRTCDEVTKYLREDG---------WPALAIHGDKDQRERDWVLQEFREGRSPIMVATDV 419 Query 575 AARGIDIHG 583 AARGI ++ Sbjct 420 AARGIGMYT 428 Score = 99.0 bits (245), Expect = 1e-20, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (42%), Gaps = 4/106 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E G + + V+ + PT IQ + P+ L G D++ A TGSGKT ++ +P Sbjct 112 ITSFDEAGFPDYVLEEVKAEGFEKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPG 171 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + Q G I + + + S F S Sbjct 172 IVHI----NAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGSSS 213 >sp|A7TJ71|DBP4_VANPO ATP-dependent RNA helicase DBP4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP4 PE=3 SV=1 Length=768 Score = 263 bits (673), Expect = 5e-76, Method: Composition-based stats. Identities = 100/470 (21%), Positives = 189/470 (40%), Gaps = 64/470 (14%) Query 167 FGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQA 226 + T +K K+ +Y +E I Y V F KDL ++ + + A Sbjct 7 YNTTQRKELRKKEVDYIKELETK--IDEYDASINKPVFF----KDLPISNSTLKGLNDSA 60 Query 227 LFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-N 285 ++ + + + + +K G + ++ + ++ + Sbjct 61 FLKLTDIQRDSIPMSLKGYD--------ILGAAKTGSGKTLAFLIPVLEKLYRERWTEFD 112 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 ALI+ P+RELA Q + + + L+IGG + ++ + ++I++G Sbjct 113 GLGALIISPTRELAMQIYEVLLKIG---TSTSFSAGLVIGGKDVKFEMERISK-INILIG 168 Query 346 TPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR L + LN S ++ LVLDEAD L G+ ++ + + +P Q + Sbjct 169 TPGRILQHMDQAIGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSNLP------PTRQTL 222 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT S ++ L+ + + D + + V+ P P E L +S+I Sbjct 223 LFSAT-QSQSLEDLARLSLTDYKTI--GNPDILNPSNGKVLGPSTP------ETLQQSYI 273 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + K + IK H + I+F + + + Sbjct 274 NVELPD----------------------KLDMLYSFIKSHLKSKMIVFLSSSKQVHFVYE 311 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 F + G S + LHG +K R + L++F + L TDV ARGID + Sbjct 312 TFRKMQPG-------ISLMHLHGRQKQKARTETLDKFNRAQHVCLFATDVVARGIDFPAI 364 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 +V+ V P++ Y+HR+GR R + G ++ ++ ++E+ + +SR Sbjct 365 DWVVQVDCPEDVDTYIHRVGRCARYGKQGKSMIMLTPQEEEGFLKRLASR 414 Score = 94.4 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 31/103 (30%), Positives = 50/103 (49%), Gaps = 5/103 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + + + + +L TDIQ +SIP+ L G D+L AA+TGSGKT AF IPV++ Sbjct 43 FKDLPISNSTLKGLNDSAFLKLTDIQRDSIPMSLKGYDILGAAKTGSGKTLAFLIPVLEK 102 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 +Y + +G S + M Y+ + Sbjct 103 LYRERWTEFDG-----LGALIISPTRELAMQIYEVLLKIGTST 140 >sp|Q9QY15|DDX25_MOUSE ATP-dependent RNA helicase DDX25 OS=Mus musculus OX=10090 GN=Ddx25 PE=1 SV=2 Length=484 Score = 256 bits (654), Expect = 5e-76, Method: Composition-based stats. Identities = 101/448 (23%), Positives = 174/448 (39%), Gaps = 107/448 (24%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQVTQTKFLPNAPKALIVEPSR 296 K + L+ P I +SQ A +++ L P+ L + P+ Sbjct 119 NRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTY 178 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDL-VS 355 ELA QT +++ K+ + + I G V + I++GTPG + D Sbjct 179 ELALQTGRVVERMGKFC--VDVEVMYAIRGNRIPRGTEVTK---QIIIGTPGTVLDWCFK 233 Query 356 TGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD 414 ++L+++R VLDEAD ++ QG+SD R+ +P Q+++ SAT Sbjct 234 RKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALP------SECQMLLFSATFED-S 286 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 V + +E+I+ P + L+ E+ + + V + Sbjct 287 VWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKG--------------------- 325 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 K + + QAIIFC+T+ + L +Q G Sbjct 326 ------------------KYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDG---- 363 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP- 593 L G+ +R ++RF+ G + LI T+V ARGID+ V V+N LP Sbjct 364 -----HQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPV 418 Query 594 -----DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 + + Y+HRIGR GR + GLA +++ Sbjct 419 NQSEEPDYETYLHRIGRTGRFGKKGLAFNMI----------------------------- 449 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPD 676 +++ LL +I++H N I Q++P+ Sbjct 450 ---EVDKLPLLMKIQDHFNSNIKQLDPE 474 Score = 65.5 bits (158), Expect = 9e-10, Method: Composition-based stats. Identities = 30/168 (18%), Positives = 67/168 (40%), Gaps = 8/168 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F E+ + E+ + + M + P+ IQ ++P++L +++ +++G+GKT AF + Sbjct 97 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 156 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA--FAIGSDGLCCQSREV 116 ++ V Q T + +M + +AI + + + Sbjct 157 AMLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTEVT 216 Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFG 164 K+ T G + ++ D RV + +A + + T F Sbjct 217 KQI--IIGTPGTVLD-WCFKRKLIDLTKIRV-FVLDEADVMIDTQGFS 260 >sp|A6SBT4|DBP5_BOTFB ATP-dependent RNA helicase dbp5 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp5 PE=3 SV=1 Length=470 Score = 256 bits (653), Expect = 6e-76, Method: Composition-based stats. Identities = 99/425 (23%), Positives = 167/425 (39%), Gaps = 79/425 (19%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + LG+ I + ++ L +A S++ G Sbjct 71 FEQLGIDASILKGLYAMNFKKPSKIQEKALPLLLRNPP------TNMIAQSQSGTGKTAA 124 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + +++ +K P P+AL + PSRELA Q I+ +++D L I G Sbjct 125 FVITILSRLDFSK--PTTPQALCLAPSRELARQIEGVIRSIGQFVDG--LTVQAAIPGAV 180 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRM 387 R+ + +VVGTPG + DL+ ++ SQ++ L LDEAD +L QG D R+ Sbjct 181 ERN----AKVNAMVVVGTPGTVMDLIKRRSIDASQMKILCLDEADNMLDQQGLGDQCMRV 236 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + I + Q+++ SAT +V ++ + LK ++ + + + Sbjct 237 KSMI-------RVEQILLFSATFPD-EVYGFAQDFSPRANEIKLKRDELTVSGIKQMFMD 288 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + K E V+ + Sbjct 289 CPNEVG---------------------------------------KYEILVKLYGLMTIG 309 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +IIF + + N+ + ++G +HG + ER Q LE F++G + Sbjct 310 SSIIFVKRRDTASNIAERLTKEG---------HKVAAVHGAFEGSERDQVLEDFRQGKAK 360 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDE--------KQNYVHRIGRVGRAERMGLAISLV 619 LI T+V ARGID+ V VIN +P + + Y+HRIGR GR R+G++IS V Sbjct 361 VLITTNVLARGIDVQSVSMVINYDVPMKGRSDSDPPPETYLHRIGRTGRFGRVGVSISFV 420 Query 620 ATEKE 624 K Sbjct 421 FDRKS 425 Score = 82.5 bits (202), Expect = 3e-15, Method: Composition-based stats. Identities = 23/116 (20%), Positives = 51/116 (44%), Gaps = 10/116 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F ++G+ I + + M++ P+ IQ +++PL+L +++ +++G+GKT AF I Sbjct 68 VETFEQLGIDASILKGLYAMNFKKPSKIQEKALPLLLRNPPTNMIAQSQSGTGKTAAFVI 127 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 ++ + + K T + + + DGL Q+ Sbjct 128 TILSRL--------DFSKPTTPQALCLAPSRELARQIEGVIRSIGQFVDGLTVQAA 175 >sp|Q9DF36|DD21B_XENLA Nucleolar RNA helicase 2-B OS=Xenopus laevis OX=8355 GN=ddx21-b PE=2 SV=2 Length=800 Score = 264 bits (675), Expect = 6e-76, Method: Composition-based stats. Identities = 107/413 (26%), Positives = 174/413 (42%), Gaps = 63/413 (15%) Query 232 VLKNAELKFNFGEEEFKF---PPKDGFVALSKAPDGYIVKS---QHSGNAQVTQTKFLPN 285 L+ + + F + F V ++ G ++ Q Sbjct 235 NLQAKGVTYLFPIQSKTFHTVYSGKDVVVQARTGTGKTFSFGIPLVERLSEDQQPLARGR 294 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 AP+ +I+ P+RELA Q N ++ K KL+ GG + Q+ +++G+D +VG Sbjct 295 APRVIILTPTRELAIQITNELRSMTK-----KLKVACFYGGTPYQQQVFAIKDGIDFLVG 349 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGR+ DLV +L+L+ ++ +VLDE D + G+S+ + + + + + Q ++ Sbjct 350 TPGRIRDLVQNYRLDLTALKHVVLDEVDMMFDVGFSEQVEEILS-VRYKPDPEENPQTLL 408 Query 406 CSATLHSFDVKKLSEKIMHF-PTWVDLKG--EDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 SAT + + +++K M VDL G TV H+ + N R K+ Sbjct 409 FSATCPDW-MYNVAKKYMRKQYEKVDLVGHRSQKAAITVEHLAIECN--------RSQKA 459 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + D V + + IIFC +K+ L Sbjct 460 AVLGDIVQVYSGSH------------------------------GKTIIFCDSKLQAHEL 489 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 + + S LHGD + ER+ L+ F++G LI T+VAARG+DI Sbjct 490 S---------TNCGSLKQSAKPLHGDLQQKEREVVLKGFRQGTFEVLIATNVAARGLDIP 540 Query 583 GVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 V V+ + P E YVHR GR GRA R G+ ISL ++ +V S G Sbjct 541 EVDLVVLYSAPKEADAYVHRSGRTGRAGRTGVCISLYEPWEKHYLRNVERSTG 593 Score = 82.1 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 54/143 (38%), Gaps = 10/143 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS+ + + + ++ IQ+++ + G DV++ A TG+GKT +F IP+++ Sbjct 223 FSKFPISKDTIKNLQAKGVTYLFPIQSKTFHTVYSGKDVVVQARTGTGKTFSFGIPLVER 282 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + E DQQ +G+ + + + + + C + + Sbjct 283 LSE---DQQPLARGRAPRVIILTPTRELAIQITNELRSMTKKLKVACFYGGTPYQ----Q 335 Query 124 ATKGLMKGKHYYEVSCHDQGLCR 146 + G + G R Sbjct 336 QVFAIKDGI---DFLVGTPGRIR 355 >sp|Q2UHB7|DBP4_ASPOR ATP-dependent RNA helicase dbp4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp4 PE=3 SV=1 Length=796 Score = 264 bits (674), Expect = 6e-76, Method: Composition-based stats. Identities = 98/463 (21%), Positives = 175/463 (38%), Gaps = 78/463 (17%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 LDI + + FS DL L+ + + +++ + Sbjct 38 LDIKETYKSFS----DLPLSEPTASGLASSHFKTLTDIQSRAIGHAL--------KGRDI 85 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYID 314 + +K G + + + ++ + ALI+ P+RELA Q +++ +Y Sbjct 86 LGAAKTGSGKTLAFLIPVLENLYRKQWSEHDGLGALILSPTRELAIQIFEVLRKIGRY-- 143 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEAD 373 LIIGG + +++ L ++I+V TPGR L L T ++ ++ LVLDEAD Sbjct 144 -HTFSAGLIIGGKSLKEEQERL-GRMNILVCTPGRMLQHLDQTAMFDVFNLQMLVLDEAD 201 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL-- 431 +L G+ ++ + +P K Q ++ SAT + V L+ + P +V + Sbjct 202 RILDMGFQKTVDAIVGHLP------KERQTLLFSAT-QTKKVSDLARLSLQDPEYVAVHE 254 Query 432 KGEDSVPDTVHH--VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + P T+ VV P++ K D LW Sbjct 255 TASSATPSTLQQHYVVTPLSQKLDVLWS-------------------------------- 282 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 I+ + + I+F + + + F G + LHG + Sbjct 283 ----------FIRSNLKAKTIVFLSSGKQVRFVYESFRHLQPG-------IPLMHLHGRQ 325 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 K R +F + L TD+ ARG+D V +VI + P++ Y+HR+GR R Sbjct 326 KQGGRLDITAKFSQAKHAVLFSTDITARGLDFPAVDWVIQMDCPEDADTYIHRVGRTARY 385 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIW 652 ER G A+ + +E + +K + +I Sbjct 386 ERDGRAVLFLDPSEESGMLKRLEQKKVPIERINIKANKQQSIR 428 Score = 94.0 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 33/120 (28%), Positives = 56/120 (47%), Gaps = 8/120 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS++ + A + + TDIQ+ +I L G D+L AA+TGSGKT AF IPV+ Sbjct 45 KSFSDLPLSEPTASGLASSHFKTLTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVL 104 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVKE 118 + +Y + +G S + + ++ + + S GL + +KE Sbjct 105 ENLYRKQWSEHDG-----LGALILSPTRELAIQIFEVLRKIGRYHTFSAGLIIGGKSLKE 159 >sp|Q650T9|RH7_ORYSJ DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0520700 PE=2 SV=1 Length=696 Score = 261 bits (668), Expect = 7e-76, Method: Composition-based stats. Identities = 104/412 (25%), Positives = 171/412 (42%), Gaps = 65/412 (16%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 I++S +G + ++ P L++ P+RELA+Q F Y L + G Sbjct 173 ILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVH---TDFAFYGATFGLSACCVYG 229 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G R Q + GVDIVVGTPGR+ D V G LN ++F VLDEAD +L+ G+ D + Sbjct 230 GSDYRSQEMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVE 289 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVDLKGEDSVP--DTVH 442 + ++ VT ++Q ++ SAT+ + VKKLS + + VDL G++ + +V Sbjct 290 LILGKVEDVT----KVQTLLFSATIPEW-VKKLSLRFLKSGKKTVDLVGDEKLKASASVR 344 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 H+ +P N R ++ + D + Sbjct 345 HLALPCN--------RAARAQVIPDIIRCYS----------------------------- 367 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + + IIF TK +L LHGD +R+ L F+ Sbjct 368 --RGGRTIIFTETKESASDLSGLIA-------------GSRALHGDVAQAQREVILAGFR 412 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G L+ T+VAARG+DI+ V +I P + + Y+HR GR GRA G+A+ L Sbjct 413 SGKFLVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPR 472 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGC--TIWYNEMQLLSEIEEHLNCTISQ 672 + + G + + + + +S + + + + Sbjct 473 YKFNVNRIERESGVKFEHISAPQPTDVAQSAGTEAAEAISSVSDSVIPVFRE 524 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 20/108 (19%), Positives = 41/108 (38%), Gaps = 1/108 (1%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 + + + + ++ IQA + L+L G D++ A TG GKT AF +P+++ + Sbjct 118 ANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESL 177 Query 65 YE-TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 T K + G+ + + + + C Sbjct 178 VNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSAC 225 >sp|Q7RZ35|DBP4_NEUCR ATP-dependent RNA helicase dbp-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-4 PE=3 SV=1 Length=823 Score = 264 bits (675), Expect = 8e-76, Method: Composition-based stats. Identities = 96/437 (22%), Positives = 172/437 (39%), Gaps = 70/437 (16%) Query 230 ACVLKNAELKFNFGEEEFKFPPKDG---FVALSKAPDGYIVKSQHSGNAQVTQTKFLP-N 285 A L+ + + + P + ++ G + ++ + ++ + Sbjct 69 ASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEKLYRARWTEYD 128 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 ALI+ P+RELA Q +++ + N L+IGG + +++ L ++I+V Sbjct 129 GLGALIISPTRELAVQIFEVLRKIGR---NHSFSAGLVIGGKSLKEEAERL-GRMNILVC 184 Query 346 TPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGR L L T ++ ++ LVLDEAD ++ G+ ++ + +P K Q + Sbjct 185 TPGRMLQHLDQTAGFDVDNLQMLVLDEADRIMDMGFQQAVDALVEHLP------KSRQTL 238 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV----HHVVVPVNPKTDRLWERLG 460 + SAT S V L+ + P +V + + V H++V P+ K D LW L Sbjct 239 LFSAT-QSKRVSDLARLSLKDPEYVSVHEAAASATPVGLQQHYIVTPLPEKLDTLWGFL- 296 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + + + I+F + Sbjct 297 -----------------------------------------RTNLKSKIIVFMSSGKQVR 315 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + + F + G + LHG +K R + RF L TDV ARG+D Sbjct 316 FVYESFKRMQPG-------IPLLHLHGRQKQIARLEITNRFTSAKYSCLFATDVVARGVD 368 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 V +VI V P++ Y+HR+GR R E G A+ + +E+ + + Sbjct 369 FPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRAVLFLDPSEEEGFLKRLEHKKVTVQK 428 Query 641 TRLKEDGGCTIWYNEMQ 657 +KE+ +I NE+Q Sbjct 429 VNVKENKKKSI-KNELQ 444 Score = 92.1 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 8/121 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS++ + A + + + TD+Q +IPL L G D+L AA TGSGKT AF +PV Sbjct 56 LNKFSDLPLCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPV 115 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG---SDGLCCQSREVK 117 ++ +Y + + G + S + + ++ S GL + +K Sbjct 116 LEKLY---RARWTEYDGLGAL--IISPTRELAVQIFEVLRKIGRNHSFSAGLVIGGKSLK 170 Query 118 E 118 E Sbjct 171 E 171 >sp|A6R9U4|MAK5_AJECN ATP-dependent RNA helicase MAK5 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=MAK5 PE=3 SV=1 Length=772 Score = 263 bits (672), Expect = 9e-76, Method: Composition-based stats. Identities = 108/436 (25%), Positives = 169/436 (39%), Gaps = 50/436 (11%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDGYIVK 268 LG++ EI + ++ A + + G +A Y +K Sbjct 192 LGISAEIQTSLSKLRFAKPTPIQTACIPLIASGHDVVGKASTGSGKTLAFGIPILEYYLK 251 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ Q + P ALI+ P+RELA Q +I N R L+ GG++ Sbjct 252 NRREEPVQHNDAELSSKYPIALILSPTRELAHQLSKHITALCTNAPNINARIALLTGGLS 311 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFIN 385 + Q VL N DIV+GTPGRL D++STG ++FLV+DEAD LLS+G+ + Sbjct 312 VQKQQRVLAN-ADIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRLLSEGHFKEVE 370 Query 386 RMHNQIPQVTSDGK---------------RLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 + + + K Q +V SAT H +KL+ K +F Sbjct 371 EILTALDRKEIHHKVTADSESEDDASRESPRQTLVFSATFHKGLQQKLAGKGRYF----- 425 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 ++ + L ++L R + + N E E Sbjct 426 -----------DGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLKEGLVECPA 474 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 + K Y + H + ++F + L + + LH Sbjct 475 MEKDLYLYTLMLYHPQHRTLVFTNSISAVRRLTAFLQNL---------NLPALALHSSMA 525 Query 551 PHERKQNLERFKK---GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 R +++ERF L+ TDVAARG+DI G+ +I+ +P YVHR GR Sbjct 526 QKARLRSVERFSSPTADPSSILVATDVAARGLDIKGIDLIIHYHVPRTADTYVHRSGRTA 585 Query 608 RAERMGLAISLVATEK 623 RA G +I L A E+ Sbjct 586 RASASGKSILLCAPEE 601 Score = 102 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 37/159 (23%), Positives = 63/159 (40%), Gaps = 13/159 (8%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ + +G+ EI ++ ++ + PT IQ IPLI G DV+ A TGSGKT AF IP+ Sbjct 186 VSGWDPLGISAEIQTSLSKLRFAKPTPIQTACIPLIASGHDVVGKASTGSGKTLAFGIPI 245 Query 61 IQIVYETLKD-----QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDG------L 109 ++ + ++ K I S + +A + L Sbjct 246 LEYYLKNRREEPVQHNDAELSSKYPIALILSPTRELAHQLSKHITALCTNAPNINARIAL 305 Query 110 CCQSREVKEWHGCRATKGLMKGK--HYYEVSCHDQGLCR 146 V++ A ++ G ++V GL R Sbjct 306 LTGGLSVQKQQRVLANADIVIGTPGRLWDVISTGHGLLR 344 >sp|Q0UMB6|DBP10_PHANO ATP-dependent RNA helicase DBP10 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP10 PE=3 SV=1 Length=878 Score = 265 bits (677), Expect = 1e-75, Method: Composition-based stats. Identities = 94/417 (23%), Positives = 159/417 (38%), Gaps = 33/417 (8%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-- 285 F A L A LK ++ FK P A+ G V + T +P Sbjct 80 FQAMGLNVALLK-AIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIE 138 Query 286 ---------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + +I+ PSRELA QTL +K+F + LR +L++GG + +Q + + Sbjct 139 RLKTHSAKVGARGVIMSPSRELALQTLKVVKEFGR---GTDLRTILLVGGDSLEEQFNSM 195 Query 337 ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 DI++ TPGR L L+LS V+++V DEAD L G++ + + +P Sbjct 196 TTNPDIIIATPGRFLHLKVEMGLDLSSVQYIVFDEADRLFEMGFAAQLAEILYALPTS-- 253 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 Q ++ SATL V+ + + P + L E + + + Sbjct 254 ----RQTLLFSATLPKSLVE-FARAGLQEPKLIRLDAESKISPDLKSAYFTIKSGDRDGA 308 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 ++ V + + + S+ K +G + + IIF TK Sbjct 309 LIHLLENVIKMPVGQTEVWKQAKEEADNLSKGKKRKRGSGNPK--DAPVEESTIIFAATK 366 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + L G + ++G+ R++ ++ F+ G R L+ TDVAA Sbjct 367 HRVEYLSTLLKAAG---------YPVSYVYGNLDQTARQEQVKDFRAGLTRILVVTDVAA 417 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 RG + LP +N G G GL I V T + + + + + Sbjct 418 RGYRHATHKPRHQLRLPFSTKNLCSSSGEDGPRWAEGLGIQPVQTCRSAISHRLTNV 474 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 31/104 (30%), Positives = 48/104 (46%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + +A+ + + +PT IQ +++PLIL G DV+ A TGSGKT AF IP+I+ Sbjct 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + S + + F G+D Sbjct 140 LKTHSAKV-------GARGVIMSPSRELALQTLKVVKEFGRGTD 176 >sp|Q6FKS8|SPB4_CANGA ATP-dependent rRNA helicase SPB4 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=SPB4 PE=3 SV=1 Length=617 Score = 259 bits (662), Expect = 1e-75, Method: Composition-based stats. Identities = 81/386 (21%), Positives = 153/386 (40%), Gaps = 52/386 (13%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIGG--VAARDQ 332 + +KF +LI+ P+REL+ Q N + F ++ D +R L++G + RD Sbjct 74 INNSKFKKGHFYSLILAPTRELSMQIQNVVSSFLEHYPEDQYPIRSQLVVGTNEKSVRDD 133 Query 333 LS-VLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 ++ +L+ I++GTPGR+ D + + + S +VLDEAD LL + + ++ N + Sbjct 134 VNTLLDERPQILIGTPGRVLDFLQSPSVKTSSCGMVVLDEADRLLDVSFFKDVEKILNVL 193 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P K+ + + SAT+ S + + P + + + T ++ V Sbjct 194 P------KQRRTGLFSATISSAGTLIF-KTGLRNPVKITVNSQGKNAPTTLNLFYSVMKP 246 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 ++L + + + + + I+ Sbjct 247 EEKL---------------------------------------QNLIHIMNNIRFKKCIV 267 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLI 570 + T + QY + +HG R++ L F + L+ Sbjct 268 YFSTCVSVTFFYQYLKYLQQTDKTLREDLQVISIHGKLTTQSRRKALSTFTESLSDCILL 327 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 TDVAARGIDI V V+ + P + ++HR GR GRA ++G AI + +E+ + Sbjct 328 TTDVAARGIDIPDVDLVLQIDPPTDADIFLHRCGRTGRANKIGRAIVFLNEGREEDYIPF 387 Query 631 CSSRGKGCYNTRLKEDGGCTIWYNEM 656 + T + ++ +E Sbjct 388 MEVKNVDIEETDINKNKISNDNNDEF 413 Score = 91.3 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 27/101 (27%), Positives = 50/101 (50%), Gaps = 3/101 (3%) Query 4 FSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++++ + P I +A+ + T +QA +IP+ DV++ + TGSGKT AF IP++ Sbjct 7 WADLDYELQPWIKKAINVSGFDSMTPVQASTIPMFAKNKDVVVESVTGSGKTIAFVIPIL 66 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + + + + KKG A + M + S+F Sbjct 67 EKIISEGINNSKFKKGHFYSLILA-PTRELSMQIQNVVSSF 106 >sp|A2YV85|RH29_ORYSI DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_028228 PE=2 SV=2 Length=851 Score = 264 bits (675), Expect = 1e-75, Method: Composition-based stats. Identities = 100/440 (23%), Positives = 165/440 (38%), Gaps = 70/440 (16%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F + L E+ + ++ P A+ G+ + + + T Sbjct 42 SKKKAKSGGFESMGLCE-EVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKT 100 Query 279 QTKFLP-----------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 +P +ALI+ P+R+LA QTL +Q K+ D L+ LI+GG Sbjct 101 AAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTD---LKISLIVGGD 157 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + Q L DI++ TPGRL + LNL V ++V DEAD L S G ++ Sbjct 158 SMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHD 217 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + +++ Q ++ SATL + ++ + P V L + + + Sbjct 218 ILHKLSDT------RQTLLFSATLPQA-LADFAKAGLRDPQIVRLDLDKKISPDLKLAFF 270 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + + K+ Y VR + Sbjct 271 TLRQEE-------------------------------------KLAALLYLVRE-RISSE 292 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +Q IIF TK + L F ++G P +G R ++ +F+ Sbjct 293 EQTIIFVSTKHHVEFLNILFREEGLEPSLS---------YGAMDQEARNIHISKFRARKT 343 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 LI TDVAARG+DI + V+N P + + +VHR+GRV R R G A + V +E Sbjct 344 MILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAY 403 Query 627 WYHVCSSRGKGCYNTRLKED 646 + K +E+ Sbjct 404 LLDLHLFLSKPLRPAPTEEE 423 Score = 95.2 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 30/104 (29%), Positives = 43/104 (41%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ E+ + V + +PT IQ +++PLIL G D+ A TGSGKT AF +P+IQ Sbjct 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + G S +D Sbjct 111 LRRHD-------AGAGIRALILSPTRDLATQTLKFAQQLGKFTD 147 >sp|Q75C76|DBP4_EREGS ATP-dependent RNA helicase DBP4 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP4 PE=3 SV=2 Length=763 Score = 262 bits (670), Expect = 1e-75, Method: Composition-based stats. Identities = 94/458 (21%), Positives = 174/458 (38%), Gaps = 62/458 (14%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +DL ++ +K A ++ A + + + +K G + Sbjct 43 FQDLPISSGTVKGLKEAAYIKMTDIQRAAIPVALKGHD--------VLGAAKTGSGKTLA 94 Query 269 SQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 ++ ++ + AL++ P+RELA Q + + KY+ L+IGG Sbjct 95 FLVPVLEKLYHERWTELDGLGALVISPTRELAMQIYEVLVKIGKYMS---FSAGLVIGGK 151 Query 328 AARDQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + ++ + ++I++GTPGRL + + LN S ++ LVLDEAD L G+ ++ Sbjct 152 DVKFEMERVSK-INILIGTPGRLLQHMDQSVGLNTSNLQILVLDEADRCLDMGFKKALDA 210 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + + +P Q ++ SAT S + L+ + V Sbjct 211 IVSNLP------PSRQTLLFSAT-QSQSLADLARLSLADYKTVGTMD------------G 251 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 P + E L + +I+ K + IK H Sbjct 252 PSSKNKPATPENLEQFYIQVALPD----------------------KLDILFSFIKSHLK 289 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I+F + + + F + G S + LHG +K R + L++F + Sbjct 290 SKMIVFLSSSKQVHFVYETFRKMQPG-------ISLMHLHGRQKQTARTETLDKFSRAQH 342 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 L TDV ARGID V +VI P++ Y+HR GR R + G ++ ++ ++E Sbjct 343 VCLFSTDVVARGIDFPSVDWVIQTDCPEDVDTYIHRAGRSARYGKTGKSLLMLTPQEEDA 402 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 + + +K+ +I LL + E Sbjct 403 FLARLKGKLIEPSKLNIKQSKRKSIKPQLQSLLFKDPE 440 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 35/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F ++ + + ++E ++ TDIQ +IP+ L G DVL AA+TGSGKT AF +PV++ Sbjct 42 TFQDLPISSGTVKGLKEAAYIKMTDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLE 101 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVK 117 +Y + +G S + M Y+ + + S GL ++VK Sbjct 102 KLYHERWTELDG-----LGALVISPTRELAMQIYEVLVKIGKYMSFSAGLVIGGKDVK 154 >sp|Q0CMM5|DBP4_ASPTN ATP-dependent RNA helicase dbp4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp4 PE=3 SV=2 Length=804 Score = 263 bits (672), Expect = 1e-75, Method: Composition-based stats. Identities = 98/478 (21%), Positives = 180/478 (38%), Gaps = 79/478 (17%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 LD+ + F+ DL L+ + +++ + Sbjct 39 LDLKESFKAFT----DLPLSEPTLSGLSASHYKTLTDIQSRAVSHAL--------KGRDI 86 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYID 314 + +K G + + + ++ + ALI+ P+RELA Q +++ +Y Sbjct 87 LGAAKTGSGKTLAFLIPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKVGRY-- 144 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEAD 373 L+IGG + +++ L ++I+V TPGR L L T + ++ LVLDEAD Sbjct 145 -HHFSAGLVIGGKSLKEEQERLGK-MNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEAD 202 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK- 432 ++ G+ ++ + +P K Q ++ SAT + V L+ + P +V + Sbjct 203 RIMDMGFQKTVDAIIGHLP------KERQTMLFSAT-QTKKVSDLARLSLQDPEYVAVHE 255 Query 433 -GEDSVPDTVHH--VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + P T+ VV P+ K D LW Sbjct 256 AAASATPSTLQQHYVVTPLPQKLDILWS-------------------------------- 283 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 I+ + + I+F + + + F G + LHG + Sbjct 284 ----------FIRSNLKSKTIVFLSSGKQVRFVYEAFRHLQPG-------IPLMHLHGRQ 326 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 K R ++ + L TDVAARG+D V +VI + P++ Y+HR+GR R Sbjct 327 KQGGRLDITTKYSQAKHAVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARY 386 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 ER G A+ + +E+ + +K + +I N++Q + + L Sbjct 387 ERDGRAVLFLDPSEEQGMLKRLEQKKVPVEKINVKANKQQSI-KNQLQNMCFKDPELK 443 Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 31/120 (26%), Positives = 55/120 (46%), Gaps = 8/120 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 AF+++ + + + TDIQ+ ++ L G D+L AA+TGSGKT AF IPV+ Sbjct 46 KAFTDLPLSEPTLSGLSASHYKTLTDIQSRAVSHALKGRDILGAAKTGSGKTLAFLIPVL 105 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVKE 118 + +Y + +G S + + ++ + + S GL + +KE Sbjct 106 ENLYRKQWAEHDG-----LGALILSPTRELAIQIFEVLRKVGRYHHFSAGLVIGGKSLKE 160 >sp|O61305|DDX19_DROME DEAD-box helicase Dbp80 OS=Drosophila melanogaster OX=7227 GN=Dbp80 PE=1 SV=1 Length=460 Score = 254 bits (649), Expect = 2e-75, Method: Composition-based stats. Identities = 105/441 (24%), Positives = 162/441 (37%), Gaps = 79/441 (18%) Query 227 LFPACVLKNAELKFNFG---EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQ 276 F A LK + LK + K L+ P I +SQ A Sbjct 74 TFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 133 Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 +++ N P+ L + P+ ELA QT + ++ KLR + G + Sbjct 134 LSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFA--VRGEEVDRSKKIE 191 Query 337 ENGVDIVVGTPGRLDDL-VSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQV 394 E I++GTPG+L D + ++ ++ VLDEAD ++ +QG+ D R+H + Sbjct 192 E---HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKML--- 245 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 Q++ SAT +V + I+ PT + L E+ + + V + Sbjct 246 ---NPHCQMLFFSATYGK-EVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEG- 300 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 K + QAIIFC Sbjct 301 --------------------------------------KYNAIQNIYGCISVGQAIIFCH 322 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 TK L G S L GD +R L+RF+ G + LI T++ Sbjct 323 TKRTAAWLAAKMTSDG---------HSVAVLTGDLTVVQRLDVLDRFRSGLEKVLITTNI 373 Query 575 AARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAISLVATEKE-KVW 627 +RGIDI + V+N LP + + Y+HRIGR GR + G+AI+L+ EK KV Sbjct 374 LSRGIDIEQLQVVVNFDLPVDLDGMADCETYLHRIGRTGRFGKSGIAINLITDEKTMKVC 433 Query 628 YHVCSSRGKGCYNTRLKEDGG 648 + K Sbjct 434 SDIEKHFNKKIEVLNTDSADD 454 Score = 83.3 bits (204), Expect = 2e-15, Method: Composition-based stats. Identities = 24/129 (19%), Positives = 49/129 (38%), Gaps = 2/129 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F + + + + + M + P+ IQ ++P +L +++ +++G+GKT AF + Sbjct 72 VKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVL 131 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V L Q T + +M + R G + E Sbjct 132 AMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRSKKIE 191 Query 119 WHGCRATKG 127 H T G Sbjct 192 EHILIGTPG 200 >sp|A3BT52|RH29_ORYSJ DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0416100 PE=2 SV=2 Length=851 Score = 264 bits (674), Expect = 2e-75, Method: Composition-based stats. Identities = 100/440 (23%), Positives = 165/440 (38%), Gaps = 70/440 (16%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F + L E+ + ++ P A+ G+ + + + T Sbjct 42 SKRKAKSGGFESMGLCE-EVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKT 100 Query 279 QTKFLP-----------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 +P +ALI+ P+R+LA QTL +Q K+ D L+ LI+GG Sbjct 101 AAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTD---LKISLIVGGD 157 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + Q L DI++ TPGRL + LNL V ++V DEAD L S G ++ Sbjct 158 SMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHD 217 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + +++ Q ++ SATL + ++ + P V L + + + Sbjct 218 ILHKLSDT------RQTLLFSATLPQA-LADFAKAGLRDPQIVRLDLDKKISPDLKLAFF 270 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + + K+ Y VR + Sbjct 271 TLRQEE-------------------------------------KLAALLYLVRE-RISSE 292 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +Q IIF TK + L F ++G P +G R ++ +F+ Sbjct 293 EQTIIFVSTKHHVEFLNILFREEGLEPSLS---------YGAMDQEARNIHISKFRARKT 343 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 LI TDVAARG+DI + V+N P + + +VHR+GRV R R G A + V +E Sbjct 344 MILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAY 403 Query 627 WYHVCSSRGKGCYNTRLKED 646 + K +E+ Sbjct 404 LLDLHLFLSKPLRPAPTEEE 423 Score = 95.2 bits (235), Expect = 9e-19, Method: Composition-based stats. Identities = 30/104 (29%), Positives = 43/104 (41%), Gaps = 7/104 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ E+ + V + +PT IQ +++PLIL G D+ A TGSGKT AF +P+IQ Sbjct 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + G S +D Sbjct 111 LRRHD-------AGAGIRALILSPTRDLATQTLKFAQQLGKFTD 147 >sp|Q5BFU1|DBP4_EMENI ATP-dependent RNA helicase dbp4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp4 PE=3 SV=1 Length=812 Score = 263 bits (672), Expect = 2e-75, Method: Composition-based stats. Identities = 98/478 (21%), Positives = 178/478 (37%), Gaps = 79/478 (17%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 LD+ + FS DL ++ + + +++ + Sbjct 41 LDLKAKYESFS----DLPISEPTLSGLTSSHFKTLTDIQSRAISHAL--------KGRDV 88 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYID 314 + +K G + + + ++ + ALI+ P+RELA Q +++ +Y Sbjct 89 LGAAKTGSGKTLAFLVPILENLYRKQWSDHDGLGALIISPTRELAIQIFEVLRKIGRY-- 146 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEAD 373 L+IGG + +++ L ++I+V TPGR L L T ++ LVLDEAD Sbjct 147 -HTFSAGLVIGGKSLKEEQERL-GRMNILVCTPGRMLQHLDQTAFFETYNLQMLVLDEAD 204 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK- 432 ++ G+ ++ + +P Q ++ SAT + V L+ + P +V + Sbjct 205 RIMDMGFQKTVDAIIGHLP------PERQTLLFSAT-QTKKVSDLARLSLQDPEYVAVHE 257 Query 433 -GEDSVPDTVHH--VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + P + VV P+ K D LW Sbjct 258 AASSATPSKLQQHYVVTPLPQKLDTLWS-------------------------------- 285 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 I+ + + I+F + + + F G + LHG + Sbjct 286 ----------FIRSNLKSKTIVFMSSGKQVRFVYESFRHMQPG-------IPLLHLHGRQ 328 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 K R RF + L TDVAARG+D V +VI + P++ Y+HR+GR R Sbjct 329 KQGGRLDITTRFSQAQHAVLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARY 388 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 ER G A+ + +EK + ++ + +I N++Q + + L Sbjct 389 ERDGRAVLFLDPSEEKGMLRRLEQKRVTVERINVRANKQQSI-KNQLQNMCFKDPELK 445 Score = 96.4 bits (238), Expect = 4e-19, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (7%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +FS++ + + + TDIQ+ +I L G DVL AA+TGSGKT AF +P+++ Sbjct 49 SFSDLPISEPTLSGLTSSHFKTLTDIQSRAISHALKGRDVLGAAKTGSGKTLAFLVPILE 108 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVKE 118 +Y +G S + + ++ + + S GL + +KE Sbjct 109 NLYRKQWSDHDG-----LGALIISPTRELAIQIFEVLRKIGRYHTFSAGLVIGGKSLKE 162 >sp|Q9VD51|DDX18_DROME Probable ATP-dependent RNA helicase pitchoune OS=Drosophila melanogaster OX=7227 GN=pit PE=2 SV=2 Length=680 Score = 260 bits (664), Expect = 2e-75, Method: Composition-based stats. Identities = 92/504 (18%), Positives = 187/504 (37%), Gaps = 68/504 (13%) Query 216 FEIPPHMKNQALFPACV-LKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN 274 F ++A A + E+ + V ++ G + Sbjct 187 FASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAV 246 Query 275 AQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 + + +F+P N +I+ P+REL+ QT +K+ + + L++GG + + Sbjct 247 ELINKLRFMPRNGTGVIIISPTRELSMQTFGVLKELMAHHHHTY---GLVMGGSNRQVES 303 Query 334 SVLENGVDIVVGTPGRLDDLVSTGKLNL-SQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 L G++I+V TPGRL D + L ++ L++DE D +L G+ + + ++ N +P Sbjct 304 EKLGKGINILVATPGRLLDHLQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLP 363 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKG--EDSVPDTVHHVVVPVN 449 KR Q ++ SAT + ++ LS+ + P +V + + + D + + Sbjct 364 ------KRRQTMLFSAT-QTARIEALSKLALKSEPIYVGVHDNQDTATVDGLEQGYIVCP 416 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + L +K+++ + Sbjct 417 SEKRLLV----------------------------------------LFTFLKKNRKKKV 436 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 ++F + + + F +HG +K +R +F + L Sbjct 437 MVFFSSCMSVKYHHELF---------NYIDLPVTSIHGKQKQTKRTTTFFQFCNAESGIL 487 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR-AERMGLAISLVATEKEKVWY 628 +CTDVAARG+DI V +++ PD+ + Y+HR+GR R + G A+ L+ E+ Sbjct 488 LCTDVAARGLDIPQVDWIVQYDPPDDPREYIHRVGRTARGSGTSGHALLLMRPEELGFLR 547 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKV 688 ++ +++ I +L+++ LN + + D K Sbjct 548 YLKAAK-VPLNEFEFSWQKIADIQLQLEKLIAKNY-FLNQSAKEAFKSYVRAYDSHQLKQ 605 Query 689 TYGQKRAAGGGSYKGHVDILAPTV 712 + K ++ P V Sbjct 606 IFNVNTLDLQAVAKSFGFLVPPVV 629 Score = 94.4 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 28/97 (29%), Positives = 51/97 (53%), Gaps = 7/97 (7%) Query 2 AAFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 +F+ + V +A++EM + T+IQ++S+ +L G D++ AA+TGSGKT AF IP Sbjct 185 RSFASLKGAVSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIP 244 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 ++++ + + G T S + M + Sbjct 245 AVELINKLRFMPRNG-----TGVIIISPTRELSMQTF 276 >sp|Q0DBS1|RH51_ORYSJ Putative DEAD-box ATP-dependent RNA helicase 51 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0535100 PE=3 SV=2 Length=590 Score = 258 bits (658), Expect = 2e-75, Method: Composition-based stats. Identities = 88/381 (23%), Positives = 168/381 (44%), Gaps = 50/381 (13%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 +A +K G + + + +F P N +++ P+RELA QT N K+ +Y Sbjct 127 MASAKTGSGKTLAFLIPAIELLCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHS 186 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEAD 373 +IGG+ R + L G++++V TPGRL D + T ++ L++DEAD Sbjct 187 QTL---GYVIGGIDLRGEAEQLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEAD 243 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 +L Q + + + ++ +P+ + Q ++ SAT + V+ ++ + Sbjct 244 RILEQNFEEQMKQIFKLLPR-----QGRQTVLFSAT-QTEKVEDFAK--------LTFGS 289 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 ++ T+ +V V + ++ E L + + SE ++ Sbjct 290 KEERQRTLVYVGVD-DHESKATVEGLKQGYCVIP------------------SERRFLVL 330 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + +A+ E + ++F + Q Q C +HG K H+ Sbjct 331 YAFLKKALSEKT--KVMVFFSSCNSVKFHAQLL---------NFIQIECYDIHGQLKQHQ 379 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-M 612 R +F K + L+CT+VAARG+DI V Y++ PDE ++Y+HR+GR R + Sbjct 380 RTSTFFKFHKAEHGILLCTNVAARGLDIPDVDYIVQYDPPDETKDYIHRVGRTARGDNGK 439 Query 613 GLAISLVATEKEKVWYHVCSS 633 G AI + ++ ++ H+ ++ Sbjct 440 GSAILFLLPKELQLLIHLKAA 460 Score = 92.5 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 50/99 (51%), Gaps = 5/99 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS++ + A A+ +M++ T+IQA SIP ++ G DV+ +A+TGSGKT AF IP I++ Sbjct 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIEL 147 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + + G T + + ++ Sbjct 148 LCRLRFSPRNG-----TGVIVLCPTRELAIQTHNVAKEL 181 >sp|Q2FY15|CSHB_STAA8 DEAD-box ATP-dependent RNA helicase CshB OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=cshB PE=3 SV=1 Length=448 Score = 253 bits (646), Expect = 3e-75, Method: Composition-based stats. Identities = 100/477 (21%), Positives = 187/477 (39%), Gaps = 74/477 (16%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + L + +K+ ++N + + S+ G K Sbjct 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTN--------LIGQSQTGTG---K 54 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 S + P+A++V P+RELA+Q + ++ ++ IGG Sbjct 55 SHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKAGVSVKV--FIGGTD 112 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 +++GTP R++DL TG L++ +LV+DEAD ++ G + ++ + Sbjct 113 IEKDRQRCNAQPQLIIGTPTRINDLAKTGHLHVHLASYLVIDEADLMIDLGLIEDVDYIA 172 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 ++ + V SAT+ ++ K + P +V + + + ++P Sbjct 173 ARL------EDNANIAVFSATIP-QQLQPFLNKYLSHPEYVAVDSKKQNKKNIEFYLIP- 224 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K E + I Sbjct 225 ---------------------------------------TKGAAKVEKTLNLIDILNPYL 245 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 IIFC ++ + ++L + + G +HG P ERKQ ++R + + ++ Sbjct 246 CIIFCNSRDNANDLARSLNEAG---------IKVGMIHGGLTPRERKQQMKRIRNLEFQY 296 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY 628 +I +D+A+RGIDI GV +VIN +P++ + HR+GR GR G+AI+L + ++E Sbjct 297 VIASDLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPDEEHN-I 355 Query 629 HVCSSRGKGCYNTRLKEDGG--CTIWYNEMQLLSEIEEHL-NCTISQVEPDIKVPVD 682 + RG +NT +DG +N+ Q ++HL N ++V IK V Sbjct 356 SLIEDRG-FVFNTVDIKDGELKEVKAHNQRQARMRKDDHLTNQVKNKVRSKIKNKVK 411 Score = 92.1 bits (227), Expect = 3e-18, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 53/109 (49%), Gaps = 9/109 (8%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + + AV+++++ PT+IQ IP IL +++ ++TG+GK+ AF +P++Q+ Sbjct 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 + +K+ Q + + YD + + G+ + Sbjct 66 IDSEIKEPQ---------AIVVAPTRELAQQLYDAANHLSQFKAGVSVK 105 >sp|Q2H2J1|DBP4_CHAGB ATP-dependent RNA helicase DBP4 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP4 PE=3 SV=1 Length=825 Score = 262 bits (670), Expect = 4e-75, Method: Composition-based stats. Identities = 89/458 (19%), Positives = 166/458 (36%), Gaps = 71/458 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K DL L ++ ++ A + + +K G Sbjct 53 KQFTDLPLCEATASGLRASHFEVLTDVQRAAIPLAL--------KGRDILGAAKTGSGKT 104 Query 267 VKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + ++ K+ + ALI+ P+RELA Q +++ + N L+IG Sbjct 105 LAFLVPVLEKLYHAKWTEYDGLGALIISPTRELAVQIFEVLRKIGR---NHFFSAGLVIG 161 Query 326 GVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G + +++ L ++I+V TPGR L L T +++ ++ LVLDEAD ++ G+ + Sbjct 162 GKSLKEEAERL-GRMNILVCTPGRMLQHLDQTANFDVNNLQILVLDEADRIMDMGFQSAV 220 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK--GEDSVPDTVH 442 + + +P Q ++ SAT S V L+ + P +V + P + Sbjct 221 DALVEHLPTT------RQTLLFSAT-QSKRVSDLARLSLKEPEYVSAHEAAVSATPTNLQ 273 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + K + ++ Sbjct 274 QSYIVTPLAE----------------------------------------KLDTLFGFLR 293 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + + I+F + + + F + G + LHG +K R + RF Sbjct 294 TNLKSKIIVFFSSGKQVRFVFESFKRMQPG-------IPLLHLHGRQKQVARMEITSRFS 346 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 L TDV ARG+D V +V+ P++ Y+HR+GR R E G A+ + Sbjct 347 SAKYGCLFATDVVARGVDFPAVDWVVQADCPEDADTYIHRVGRTARYESKGRAVLFLEPS 406 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 +E + + ++E+ +I NE+Q + Sbjct 407 EEAGFLKRLEQKKVPLQKVNVRENKKKSI-KNELQSYN 443 Score = 94.8 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+++ + A + + + TD+Q +IPL L G D+L AA+TGSGKT AF +PV Sbjct 52 IKQFTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPV 111 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG---SDGLCCQSREVK 117 ++ +Y K + G I S + + ++ S GL + +K Sbjct 112 LEKLY-HAKWTEYDGLGALII----SPTRELAVQIFEVLRKIGRNHFFSAGLVIGGKSLK 166 Query 118 E 118 E Sbjct 167 E 167 >sp|A3AVH5|RH13_ORYSJ DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0510400 PE=2 SV=2 Length=832 Score = 262 bits (670), Expect = 5e-75, Method: Composition-based stats. Identities = 106/481 (22%), Positives = 189/481 (39%), Gaps = 51/481 (11%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 L F+ P ++ FPA + ++ E G L + + + S Sbjct 216 LGFKEPTPIQKAC-FPAAAHQGKDV-IGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSR 273 Query 274 NAQVTQTKFLPNAP-KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + TQ + +P +ALI+ P+RELA+Q +++K+ K++ +++ + I+GG++ Q Sbjct 274 EDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFL---RIQVVPIVGGLSMEKQ 330 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 +L+ +IVVGTPGRL +L+STG + L + F VLDEAD ++ +G+ + + Sbjct 331 ERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIE 390 Query 390 QIPQVTSDG------------------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 +P K+ Q V SATL LS + Sbjct 391 MLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLA------LSANFRKKLKRGLV 444 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + S + + + + + V + E + E Sbjct 445 TAKASASTDL---------SSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIECSDD 495 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K Y + H + IIFC + +L G + + H + Sbjct 496 DKDAYLYYILSVHGQGRTIIFCTSIAALRHLSSILRVLG---------INVLTNHAQMQQ 546 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + ++RF++ + L+ TD ARG+D V VI+ LP Y+HR GR R Sbjct 547 RARMKAVDRFRESENSILVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHRSGRTARKSM 606 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 G +I+L++ + +Y +C S K + N + L +I++ Sbjct 607 AGCSIALISPADKAKFYSLCKSLSKENLQQFPVDHAYMPAVMNRLTLARQIDKITRKNSQ 666 Query 672 Q 672 + Sbjct 667 E 667 Score = 96.4 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 32/97 (33%), Positives = 49/97 (51%), Gaps = 4/97 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVI 61 A+ E+ + P + AV + + PT IQ P G DV+ AAETGSGKT AF +P++ Sbjct 199 AWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPIL 258 Query 62 QIVY-ETLKDQQEGKKGKTTIKTG--ASVLNKWQMNP 95 Q + E K + ++ ++T S L + P Sbjct 259 QRLLEEQEKAMRLSREDESTQDENSRESPLRALILTP 295 >sp|A2XVF7|RH13_ORYSI DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_016050 PE=3 SV=2 Length=832 Score = 262 bits (670), Expect = 5e-75, Method: Composition-based stats. Identities = 106/481 (22%), Positives = 189/481 (39%), Gaps = 51/481 (11%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 L F+ P ++ FPA + ++ E G L + + + S Sbjct 216 LGFKEPTPIQKAC-FPAAAHQGKDV-IGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSR 273 Query 274 NAQVTQTKFLPNAP-KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + TQ + +P +ALI+ P+RELA+Q +++K+ K++ +++ + I+GG++ Q Sbjct 274 EDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFL---RIQVVPIVGGLSMEKQ 330 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 +L+ +IVVGTPGRL +L+STG + L + F VLDEAD ++ +G+ + + Sbjct 331 ERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIE 390 Query 390 QIPQVTSDG------------------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 +P K+ Q V SATL LS + Sbjct 391 MLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLA------LSANFRKKLKRGLV 444 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + S + + + + + V + E + E Sbjct 445 TAKASASTDL---------SSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIECSDD 495 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K Y + H + IIFC + +L G + + H + Sbjct 496 DKDAYLYYILSVHGQGRTIIFCTSIAALRHLSSILRVLG---------INVLTNHAQMQQ 546 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + ++RF++ + L+ TD ARG+D V VI+ LP Y+HR GR R Sbjct 547 RARMKAVDRFRESENSILVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHRSGRTARKSM 606 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 G +I+L++ + +Y +C S K + N + L +I++ Sbjct 607 AGCSIALISPADKAKFYSLCKSLSKENLQQFPVDHAYMPAVMNRLTLARQIDKITRKNSQ 666 Query 672 Q 672 + Sbjct 667 E 667 Score = 96.4 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 32/97 (33%), Positives = 49/97 (51%), Gaps = 4/97 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVI 61 A+ E+ + P + AV + + PT IQ P G DV+ AAETGSGKT AF +P++ Sbjct 199 AWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPIL 258 Query 62 QIVY-ETLKDQQEGKKGKTTIKTG--ASVLNKWQMNP 95 Q + E K + ++ ++T S L + P Sbjct 259 QRLLEEQEKAMRLSREDESTQDENSRESPLRALILTP 295 >sp|Q8JHJ2|DDX55_DANRE ATP-dependent RNA helicase DDX55 OS=Danio rerio OX=7955 GN=ddx55 PE=2 SV=2 Length=593 Score = 256 bits (655), Expect = 6e-75, Method: Composition-based stats. Identities = 86/353 (24%), Positives = 147/353 (42%), Gaps = 57/353 (16%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 + K ALI+ P+RELA Q + +F + P+ ++L+IGG + + L+ Sbjct 75 EEKLKKMQVGALIITPTRELAMQISEVMGRFLQ--GFPQFTQILLIGGSNPIEDVEKLKT 132 Query 338 NGVDIVVGTPGRLDDLVSTGK--LNL----SQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 G +I++ TPGRL+D+ L+L + LVLDEAD LL G+ +N + + Sbjct 133 QGANIIIATPGRLEDMFRRKADGLDLATAVKSLDVLVLDEADRLLDMGFEASLNTILGYL 192 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P K+ + + SAT + +++KL + P + +K + +V Sbjct 193 P------KQRRTGLFSAT-QTQELEKLVRAGLRNPVRITVKEKGVAASSVQ--------- 236 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + A ++ K V +++HK ++ ++ Sbjct 237 ------------------------KTPAKLSNYYTMCRAEEKFNTLVAFLRQHKHEKQLV 272 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T + + + S C+HG K H+R + F+ L+C Sbjct 273 FFSTCACVEYFGKAL-------EVLVKNVSIHCIHGKMK-HKRNKIFADFRALKSGILVC 324 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 TDV ARGIDI V +V+ P ++VHR GR R G A+ + +E Sbjct 325 TDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTARIGNQGNALVFLLPMEE 377 Score = 93.3 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 25/94 (27%), Positives = 43/94 (46%), Gaps = 6/94 (6%) Query 4 FSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + + + I Q ++E+ + T +Q+ IPL + DV A TGSGKT AF IP + Sbjct 9 WGSLPVKLHDNILQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPAL 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 +I+ + ++E K + + M Sbjct 69 EILLK----REEKLKKMQVGALIITPTRELAMQI 98 >sp|Q754U8|PRP5_EREGS Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=PRP5 PE=3 SV=2 Length=855 Score = 262 bits (670), Expect = 7e-75, Method: Composition-based stats. Identities = 101/463 (22%), Positives = 178/463 (38%), Gaps = 86/463 (19%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL---PNAPKALIVEPSRELAEQTL 303 + +SK G V Q+ + L P LI+ P+RELA Q Sbjct 308 PAIMSGRDVIGISKTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIH 367 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LN 360 + +F +P +R L GG + Q++ ++ GV+IV+ TPGR DL+S +N Sbjct 368 EEVTKFTS--GDPSIRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDLLSLNSGNLIN 425 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 ++ F+V+DEAD L G+ +N++ I Q ++ SAT + +K + Sbjct 426 PKRIVFVVMDEADRLFDLGFEPQVNQIMKCI------RPDKQCVLFSATFPN-KLKSFAS 478 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 KI+H P ++ + + + + + V + + D+ + + ++ Sbjct 479 KILHDPVYITVNSKSLINENIEQKVEIFSNEEDKFKSLIHWLALTQQNL----------- 527 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 ++ I+F ++ CD L G F Sbjct 528 ------------------------NDEKTIVFVSSQQICDILYNRLEANG---------F 554 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 + +H + ER NL+ FK+ LICT+V +RG+++ V VI YV Sbjct 555 TTFAIHAGKIYTERAWNLKCFKETANGILICTEVLSRGLNVPEVSLVIIYNAAKTFAQYV 614 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 H GR R G A++L+ + Y + S Sbjct 615 HTTGRTARGSNKGTALTLLMNTELAASYILMKSMRD-----------------------E 651 Query 661 EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKG 703 E+ +H + T+S +K ++F+ + G+ R G KG Sbjct 652 ELNKHHDATVS----TLKQMSEKFNKGLKTGEYRLVKGFGGKG 690 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 31/116 (27%), Positives = 60/116 (52%), Gaps = 9/116 (8%) Query 1 MAAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ I + E+++ +PT IQA++IP I+ G DV+ ++TGSGKT +F +P Sbjct 274 ILKWSQLGLNSGIMNLLTRELEFTVPTPIQAQAIPAIMSGRDVIGISKTGSGKTVSFILP 333 Query 60 VIQIVYETLKDQQE-GKKGKTTIKTGASVLNKWQMNPYDRGSAFA---IGSDGLCC 111 +++ + K Q+ G + S + + ++ + F LCC Sbjct 334 LLRQI----KAQRPLGGDETGPLGLILSPTRELALQIHEEVTKFTSGDPSIRSLCC 385 >sp|Q9UHL0|DDX25_HUMAN ATP-dependent RNA helicase DDX25 OS=Homo sapiens OX=9606 GN=DDX25 PE=1 SV=2 Length=483 Score = 253 bits (645), Expect = 9e-75, Method: Composition-based stats. Identities = 95/420 (23%), Positives = 163/420 (39%), Gaps = 75/420 (18%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQVTQTKFLPNAPKALIVEPSR 296 K + L+ P I +SQ A +++ L P+ L + P+ Sbjct 118 NRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTY 177 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDL-VS 355 ELA QT ++Q K+ ++ + I G + + I++GTPG + D Sbjct 178 ELALQTGRVVEQMGKFC--VDVQVMYAIRGNRIPRGTDITK---QIIIGTPGTVLDWCFK 232 Query 356 TGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD 414 ++L+++R VLDEAD ++ QG+SD R+ +P Q+++ SAT Sbjct 233 LKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALP------SECQMLLFSATFED-S 285 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 V +E+I+ P + L+ E+ + + V + D Sbjct 286 VWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKD--------------------- 324 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 K + + QAIIFC+T+ + L IQ G Sbjct 325 ------------------KYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDG---- 362 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP- 593 L G+ +R ++RF+ G + LI T+V ARGID+ V V+N LP Sbjct 363 -----HQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPV 417 Query 594 -----DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 + + Y+HRIGR GR + GLA +++ ++ + ++ Sbjct 418 KQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAEDMDE 477 Score = 67.1 bits (162), Expect = 3e-10, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 61/166 (37%), Gaps = 4/166 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + F E+ + E+ + + M + P+ IQ ++P++L +++ +++G+GKT AF + Sbjct 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V Q T + QM + G Sbjct 156 AMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDIT 215 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFG 164 T G + +++ D RV + +A + + T F Sbjct 216 KQIIIGTPGTVLD-WCFKLKLIDLTKIRV-FVLDEADVMIDTQGFS 259 >sp|Q761Z9|RH18_ORYSJ DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0164500 PE=1 SV=2 Length=647 Score = 257 bits (657), Expect = 1e-74, Method: Composition-based stats. Identities = 97/452 (21%), Positives = 171/452 (38%), Gaps = 52/452 (12%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 L+ E+ +K ++ A + ++ G G + Sbjct 30 LSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATG--------SGKTLAFVVPV 81 Query 274 NAQVTQ--TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 + + + P+ +I+ P+REL+ Q N + F + + +L++GG + Sbjct 82 VEILRRRPSPPKPHEVLGIIISPTRELSSQIYNVAQPF--FATLKGVSSMLLVGGFDIKA 139 Query 332 QLSVLEN-GVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 +L LE G +I+VGTPG+L D++ LN + L+LDEAD LL G+ I + + Sbjct 140 ELKKLEEEGANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIIS 199 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 ++P K + + SAT + VK+L++ + P V++K E Sbjct 200 KLP------KLRRTGLFSAT-QTEAVKELAKAGLRNPVRVEVKTE------------VKP 240 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 D + LG S T G M EA K V + ++ + Sbjct 241 TGKDGAQQELGPS-----------KTPLGLRLEYMICEASN--KSSQLVDFLVQNNGKKI 287 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +++ T D + HG K R++ L F L Sbjct 288 MVYFATCACVDYWAIVLPLLDSLKGS-----PIIPYHGKMKQGPREKALASFSALSSGIL 342 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 +CTDVAARG+DI V ++ P + ++HR GR R ++ G AI + +++ + Sbjct 343 VCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDAIVFLLPKED-TYVE 401 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 RG + + L + Sbjct 402 FLKRRGVPLTERECSTNAVDIVPQIRSAALED 433 Score = 94.4 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%) Query 4 FSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FSE+ + PE+ +A++ + T +QA +IPL+L DV + A TGSGKT AF +PV+ Sbjct 23 FSELSPALSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVV 82 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 E L+ + K + S + Y+ F G+ Sbjct 83 ----EILRRRPSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSS 128 >sp|Q7XJN0|RH17_ARATH DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana OX=3702 GN=RH17 PE=2 SV=1 Length=609 Score = 256 bits (654), Expect = 1e-74, Method: Composition-based stats. Identities = 85/484 (18%), Positives = 166/484 (34%), Gaps = 42/484 (9%) Query 215 AFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG-YIVKSQHSG 273 A + + F + L F+ P A+ G ++ + +G Sbjct 18 ASKAKSGLFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTG 77 Query 274 NAQV--------------TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 + + + AL++ P+REL Q +++ + Sbjct 78 TGKTIAYLAPLIHHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLH--RFHWIV 135 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQ 378 ++GG + + L G+ I++ TPGRL D + +T +R+++ DEAD +L Sbjct 136 PGYVMGGEKKAKEKARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILEL 195 Query 379 GYSDFINRMHNQI----------PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 GY I ++ + + G + Q ++ SATL+ V L++ + P Sbjct 196 GYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLND-KVNDLAKLSLDDPVM 254 Query 429 VDLKG-EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + L + ++ P + D + ++ ++D + Sbjct 255 IGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGAR 314 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF------- 540 + +L + + ++F T+ D + P+ + + Sbjct 315 LVALLS--VLKNLFEREASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFL 372 Query 541 --SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 LHG + +R+ FK L+ TDVAARG+D V +I P E Sbjct 373 KCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATE 432 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 YVHR+GR R G A+ + + + G L + M Sbjct 433 YVHRVGRTARIGEKGEALLFLQPIEIDYLKEL-KKHGASLTEYPLMKVLDKFPIPGNMPR 491 Query 659 LSEI 662 + ++ Sbjct 492 IKKV 495 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 28/101 (28%), Positives = 50/101 (50%), Gaps = 4/101 (4%) Query 3 AFSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +FS +G+ +++ ++E M + PT +QA++IP+IL G DVL+ A TG+GKT A+ P+I Sbjct 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + + T + + Y+ Sbjct 90 HHLQGHSPKVD---RSHGTFALVIVPTRELCLQVYETLEKL 127 >sp|Q93ZG7|RH38_ARATH DEAD-box ATP-dependent RNA helicase 38 OS=Arabidopsis thaliana OX=3702 GN=RH38 PE=1 SV=2 Length=496 Score = 253 bits (646), Expect = 1e-74, Method: Composition-based stats. Identities = 98/461 (21%), Positives = 179/461 (39%), Gaps = 78/461 (17%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS---KAPDGYIVKSQHSGNAQ-- 276 + + F L +K + E +F+ P K ++L P +++ H+G+ + Sbjct 87 YTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTT 146 Query 277 ------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 +++ P+AL + P+RELA Q + +++ K+ + L + Sbjct 147 CFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTG---ITAELAVPDSTRG 203 Query 331 DQLSVLENGV--DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRM 387 + V +V+GTPG L ++ +L L+ ++ LV DEAD +L + G+ D ++ Sbjct 204 APAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKI 263 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 I +V QV++ SAT + VK + + P + +K ED D+V V Sbjct 264 MKDIGRVNP---NFQVLLFSATFNET-VKDFVARTVKDPNQLFVKREDLALDSVKQYKVV 319 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + +++ + D + Sbjct 320 CPKEQNKIEVIKDQIMELGD--------------------------------------IG 341 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 Q IIF +TK + + + G + +HG+ +R + ++ FK+ + Sbjct 342 QTIIFVKTKASAQKVHKALAEMG---------YDVTSVHGNLTESDRDKIVKEFKECLTQ 392 Query 568 FLICTDVAARGIDIHGVPYVINVTLPD-------EKQNYVHRIGRVGRAERMGLAISLVA 620 LI TDV ARG D V V+N LP + + Y+HR+GR GR R G +L+ Sbjct 393 VLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLL 452 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 + W + + + +KE L E Sbjct 453 DDG---WDKEVMEKIEKYFEANVKEIKSWNSEEEYKSALKE 490 Score = 80.6 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 55/146 (38%), Gaps = 17/146 (12%) Query 2 AAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILG--GGDVLMAAETGSGKTGAFSI 58 + F ++ + PE+ + + EM + P+ IQA S+P+I+ ++ A GSGKT F + Sbjct 91 SRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVL 150 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V TL++ Q + + G+ + Sbjct 151 GMLSRVDPTLREPQALC---------ICPTRELANQNMEVLQKMGKF-TGITAELAVPDS 200 Query 119 WHGCR-ATKGLMKGKHYYEVSCHDQG 143 G AT+G H V G Sbjct 201 TRGAPAATRGAPVSAH---VVIGTPG 223 >sp|Q09747|DBP5_SCHPO ATP-dependent RNA helicase dbp5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp5 PE=1 SV=1 Length=503 Score = 253 bits (645), Expect = 2e-74, Method: Composition-based stats. Identities = 94/395 (24%), Positives = 166/395 (42%), Gaps = 76/395 (19%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQVTQTKFLPNAPKALIVEPSR 296 ++ K K + LS P I +SQ +++ P+A+ + PSR Sbjct 135 QKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSR 194 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 ELA Q ++ + + KY + ++ I + + IV+GTPG + DL+ Sbjct 195 ELARQIMDVVTEMGKYTE---VKTAFGIKDSVPKG----AKIDAQIVIGTPGTVMDLMKR 247 Query 357 GKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV 415 +L+ ++ VLDEAD +L QG D R+ + +P + Q+++ SAT S V Sbjct 248 RQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLP------RNTQIVLFSATF-SERV 300 Query 416 KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNT 475 +K +E+ + LK E+ + + + + + + Sbjct 301 EKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHK--------------------- 339 Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 +L Y + I Q+IIFC+ K + + + G Sbjct 340 -------------YNVLVELYGLLTI-----GQSIIFCKKKDTAEEIARRMTADG----- 376 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP-- 593 + CL G+ + +R ++ F+ G + L+ T+V ARGID+ V V+N +P Sbjct 377 ----HTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLD 432 Query 594 ----DEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + Q Y+HRIGR GR R+G++I+ V +K Sbjct 433 QAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKS 467 Score = 70.2 bits (170), Expect = 3e-11, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 51/109 (47%), Gaps = 11/109 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+ + PE+ + + M + P+ IQ +++PL+L +++ +++G+GKT AF++ Sbjct 113 VKSFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFAL 172 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 ++ V ++ Q + + D + ++ Sbjct 173 TMLSRVDASVPKPQ---------AICLAPSRELARQIMDVVTEMGKYTE 212 >sp|A3GG51|MAK5_PICST ATP-dependent RNA helicase MAK5 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=MAK5 PE=3 SV=2 Length=836 Score = 260 bits (665), Expect = 2e-74, Method: Composition-based stats. Identities = 99/419 (24%), Positives = 165/419 (39%), Gaps = 46/419 (11%) Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + K + N P +I P+RELA Q ++++ KY + I GG++ + Q +L Sbjct 294 NRQKKIINHPTGIIFAPTRELAHQVVSHLNSLAKYSPLSTNGIVSITGGLSIQKQERLLS 353 Query 338 NGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 +G I+V TPGR+ +L+ L+ +VLDEAD LL G+ + + + + Sbjct 354 HGPGIIVATPGRILELLQKDEDLTKRLASTDIIVLDEADRLLQDGHFEEFETILDLFRKN 413 Query 395 TSDGK----RLQVIVCSATLHSFDVKKL---SEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 K + Q +V SAT KL + L G D + Sbjct 414 RPKNKTFPWKWQTLVFSATFSRDLFGKLDKNQKSHKRNSEGSSLIGNDEI---------- 463 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + L ++L R V A N E E + Y + +K Sbjct 464 ----LNLLNDKLKFKDTRPALVDANPKEIVSGNITEALVECGPTERDLYLYYFLLMYK-G 518 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK---- 563 ++F + L + +H +R + LERF+K Sbjct 519 STLVFANSIDSVKRLVPFLNNL---------NIPAFAIHSSMIQKQRLRALERFQKASEK 569 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 D LI +DVAARG+DI + +V + LP Y+HR GR RA + G+++ + ++ Sbjct 570 NDTAVLIASDVAARGLDIPNIDHVAHYHLPRSADVYIHRSGRTARAGKEGVSVMFCSPQE 629 Query 624 -----EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI 677 K+ V ++ KG RL + EM L+S+++ + + DI Sbjct 630 ASGPLRKLRRLVANNSTKGG---RLNMHNDVKLLPIEMDLVSQLKPRVIIASKLADADI 685 Score = 99.0 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 35/141 (25%), Positives = 55/141 (39%), Gaps = 17/141 (12%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 S + P + + + PT IQ ++IPL G DV+ A TGSGKT A+ IP+++ Sbjct 225 SNFSLSPYTLHGLSVLGFDKPTPIQKKTIPLAAEGKDVVGKAITGSGKTLAYGIPILEKY 284 Query 65 YETLKDQQEGKKGKTTIKTGA---SVLNKW------QMNPYDRGSAFAIGS-----DGLC 110 L + ++ K + + +N + S + GL Sbjct 285 LSNLSIINQNRQKKIINHPTGIIFAPTRELAHQVVSHLNSLAKYSPLSTNGIVSITGGLS 344 Query 111 CQSREVKEWHG---CRATKGL 128 Q +E HG AT G Sbjct 345 IQKQERLLSHGPGIIVATPGR 365 >sp|Q6NZQ2|DDX31_MOUSE Probable ATP-dependent RNA helicase DDX31 OS=Mus musculus OX=10090 GN=Ddx31 PE=2 SV=2 Length=687 Score = 257 bits (657), Expect = 2e-74, Method: Composition-based stats. Identities = 97/530 (18%), Positives = 209/530 (39%), Gaps = 58/530 (11%) Query 231 CVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY-------IVKSQHSGNAQVTQTKFL 283 VLK + + + + S+ G +V+S + +++ ++ Sbjct 120 TVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCVPVVQSLQALTSKIQRS--- 176 Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 + P AL++ P+RELA Q+ + +++ K + +++GG + + + L G++I+ Sbjct 177 -DGPYALVLVPTRELALQSFDTVQKLLK--PFTWIVPGVLMGGEKRKSEKARLRKGINIL 233 Query 344 VGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D + T L+ +++R+L++DEAD +L G+ I + N V ++ ++ Q Sbjct 234 ISTPGRLVDHIKSTKNLHFNRIRWLIVDEADRILDLGFEKDITVILN---AVNAECQKRQ 290 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL + V +L + +H P + + ++ V + + + E L + Sbjct 291 NVLLSATL-TEGVTRLVDISLHNPVSISVLDKNCNQPNPKE-VASIQLNSFAIPESLDQH 348 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN- 521 + S+ + + ++ K K + I+F + + Sbjct 349 VVLVP------------------SKLRLVCLAAFILQKCKFEKNQKMIVFFSSCELVEFH 390 Query 522 ----LEQYFIQQGGGP----DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 L G + LHG+ + ER F + L+CTD Sbjct 391 YSLFLHTLLCHSGTPTSEHLPSASWPLKFLRLHGNMEQEERTSVFHEFSHSETGVLLCTD 450 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 VA+RG+D+ V +++ + P Y+HRIGR R G ++ ++A + + + S Sbjct 451 VASRGLDLPQVTWIVQYSAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASH 510 Query 634 R---GKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTY 690 + G+ L + + + I + ++ +++ + Sbjct 511 KINVGEIKMEDILAVLAKDDCFKRRQRGAQKSRASGPQEIRERATVLQTVFEDY----VH 566 Query 691 GQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF 740 +R L ++ A KE ++ F + ++F Sbjct 567 SSQRMVSWAKK-----ALQSFIRAYATYPKELKSIFHVRALHLGHVAKSF 611 Score = 87.9 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 25/101 (25%), Positives = 45/101 (45%), Gaps = 4/101 (4%) Query 3 AFSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 AF E+ + P + + + T +Q +SIP++L G D L+ ++TGSGKT A+ +PV+ Sbjct 104 AFQELDLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCVPVV 163 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 Q + Q + + + +D Sbjct 164 QSLQALTSKIQ---RSDGPYALVLVPTRELALQSFDTVQKL 201 >sp|Q6BP45|ROK1_DEBHA ATP-dependent RNA helicase ROK1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=ROK1 PE=3 SV=2 Length=550 Score = 254 bits (648), Expect = 2e-74, Method: Composition-based stats. Identities = 103/499 (21%), Positives = 192/499 (38%), Gaps = 82/499 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 L ++ ++ + +++ + + +A + G + Sbjct 120 KLDKKLLSNLIDAGFTEPTPIQDEAIPISL--------EGRDLIACAPTGSGKTLAFLIP 171 Query 273 GNAQVTQTKF--LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 + Q+ + LI+ P+ ELA Q + K K++ ++ +A + Sbjct 172 LVQTILQSNPNVKNYGIRGLIISPTNELAVQIFQELNTMTK---GKKMKIGILSKQLANK 228 Query 331 DQLSVL-ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 ++ + DI+V TP RL D + ++LS+V LV+DE D L QG+ + + + + Sbjct 229 INNKIINSSKYDILVSTPLRLIDSIKNETISLSKVEQLVIDETDKLFDQGFVEQTDEILS 288 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 +L+ + SAT+ S V+++++ IM P V + +++ +T+ +V Sbjct 289 NC-----TNTKLRKSMFSATIPSG-VEEMAQSIMKDPIRVIIGHKEAASNTIEQKLVFTG 342 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + +L + Sbjct 343 NEEGKLLAIRQMIQ--------------------------------------QGEFKPPI 364 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIF ++ L + + + +H +R P +R + ++RFK GD+ L Sbjct 365 IIFLQSITRAKALFHELLYD---------RLNVDVIHAERTPKQRDEVIKRFKSGDIWVL 415 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 I TDV ARG+D GV VIN +P Q YVHRIGR GR + G A++ E +K Sbjct 416 ITTDVIARGVDFKGVNLVINYDVPQSAQAYVHRIGRTGRGGKAGKAVTFFTKEDDKAVKP 475 Query 630 VCS-SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE-------EHLNCTISQVEPDIKVPV 681 + + + GC + G + W +M LS+ E E IS V +K Sbjct 476 IINVMKQSGC-------ESGYSGWLEDMHKLSKNEKKDVKKHEIKRKQISTVPKIMKQKR 528 Query 682 DEFDGKVTYGQKRAAGGGS 700 + + + ++R S Sbjct 529 KQREEMIDASKRRKQESQS 547 Score = 104 bits (260), Expect = 3e-22, Method: Composition-based stats. Identities = 31/112 (28%), Positives = 57/112 (51%), Gaps = 6/112 (5%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F ++ + ++ + + + PT IQ E+IP+ L G D++ A TGSGKT AF Sbjct 109 IGSFEDLIGRYKLDKKLLSNLIDAGFTEPTPIQDEAIPISLEGRDLIACAPTGSGKTLAF 168 Query 57 SIPVIQIVYETLKD-QQEGKKGKTTIKTGASVLNKWQ-MNPYDRGSAFAIGS 106 IP++Q + ++ + + G +G T + +Q +N +G IG Sbjct 169 LIPLVQTILQSNPNVKNYGIRGLIISPTNELAVQIFQELNTMTKGKKMKIGI 220 >sp|Q13206|DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10 OS=Homo sapiens OX=9606 GN=DDX10 PE=1 SV=2 Length=875 Score = 261 bits (667), Expect = 2e-74, Method: Composition-based stats. Identities = 97/530 (18%), Positives = 198/530 (37%), Gaps = 77/530 (15%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 +++++ D L+ + ++ ++ + Sbjct 63 INVNEITRF-----SDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLAL--------QGKDV 109 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 + +K G + + + ++ + LI+ P+RELA QT +++ K Sbjct 110 LGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGK--- 166 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQVRFLVLDEAD 373 N LIIGG + + + N ++I+V TPGRL + T + + ++ LVLDEAD Sbjct 167 NHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEAD 225 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP--TWVDL 431 +L G++D +N + +P K+ Q ++ SAT + VK L+ + P WV Sbjct 226 RILDMGFADTMNAVIENLP------KKRQTLLFSAT-QTKSVKDLARLSLKNPEYVWVHE 278 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 K + S P T+ + + Sbjct 279 KAKYSTPATLEQNYIVCELQQ--------------------------------------- 299 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K ++ H ++I+F + + L + F + G S + LHG ++ Sbjct 300 -KISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPG-------VSILALHGRQQQ 351 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + F + L TD+AARG+D V +V+ P++ Y+HR GR R + Sbjct 352 MRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKE 411 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 G A+ ++ ++ + + + ++ + + +L++ ++ Sbjct 412 DGEALLILLPSEKAMVQQLLQKK-VPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQR 470 Query 672 QVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKE 721 ++ D +V K + + +AP V+ L ++K+ Sbjct 471 CFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGL-AVAPRVRFLQKMQKQ 519 Score = 95.2 bits (235), Expect = 8e-19, Method: Composition-based stats. Identities = 33/120 (28%), Positives = 56/120 (47%), Gaps = 8/120 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS+ + + + ++E + L T+IQ ++I L L G DVL AA+TGSGKT AF +PV Sbjct 68 ITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPV 127 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD---GLCCQSREVK 117 ++ +Y +G S + ++ D GL +++K Sbjct 128 LEALYRLQWTSTDG-----LGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLK 182 >sp|Q07886|DDX49_DROME Probable ATP-dependent RNA helicase Dbp45A OS=Drosophila melanogaster OX=7227 GN=Dbp45A PE=2 SV=2 Length=521 Score = 253 bits (645), Expect = 2e-74, Method: Composition-based stats. Identities = 110/482 (23%), Positives = 185/482 (38%), Gaps = 76/482 (16%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQTKFLPNAPKALIVEPS 295 G + + A+ D SG + + P + AL++ P+ Sbjct 25 LGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEPVSHFALVLTPT 84 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS 355 ELA Q +QF +R ++ GG + L IVV PGRL D ++ Sbjct 85 HELAYQIS---EQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLT 141 Query 356 -TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD 414 + +++LV+DEAD +L+ + + ++ + +P K Q + SAT+ Sbjct 142 GCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLP------KTRQNLFFSATM---- 191 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 K ++ FP D E L + ++ D Sbjct 192 -KDFIKESSIFPIASD-------------CFEWSQDSDVATVETLDQRYLLCADYDR--- 234 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 ++ E + +E++ +IF TK C L Sbjct 235 ---------------DMVLIEALRKYREENENANVMIFTNTKKYCQLLSMTL-------- 271 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 K + VCLHG + ER L RFK +R LI TDVAARG+DI V V+N LP Sbjct 272 -KNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPR 330 Query 595 EKQNYVHRIGRVGRAERMGLAISLV-ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + Y+HR+GR RA R G++IS+ ++ + NT+L E Sbjct 331 TPKEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEI-----NTKLTEH------P 379 Query 654 NEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK-VTYGQKRAAGGGSYKGHVDILAPTV 712 + +++ I +N T + E ++++ ++FD + Y +K G ++ L Sbjct 380 IDQRMVERIFMQVNVT--RRESEMQLDNNDFDERAQNYRRKTWIMEGKDPDQMEALYRKK 437 Query 713 QE 714 Q+ Sbjct 438 QK 439 Score = 92.1 bits (227), Expect = 4e-18, Method: Composition-based stats. Identities = 27/112 (24%), Positives = 51/112 (46%), Gaps = 10/112 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F +G+ P + + + ++ T IQ + IP IL G D + AA+TGSGKT AF++P+++ Sbjct 9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDR-GSAFAIGSDGLCCQSR 114 + E + + + ++ ++ A +C S Sbjct 69 LSE---------EPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSG 111 >sp|Q5ZJF6|DDX10_CHICK Probable ATP-dependent RNA helicase DDX10 OS=Gallus gallus OX=9031 GN=DDX10 PE=2 SV=1 Length=875 Score = 261 bits (667), Expect = 3e-74, Method: Composition-based stats. Identities = 92/466 (20%), Positives = 176/466 (38%), Gaps = 76/466 (16%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 D L+ + ++ ++ + + +K G + Sbjct 77 DFPLSKKTLKGLQEAQYRMVTEIQRQTIGLAL--------QGKDVLGAAKTGSGKTLAFI 128 Query 271 HSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + + ++ + LI+ P+RELA QT +++ K N LIIGG Sbjct 129 VPALELLYRLQWTSADGLGVLIISPTRELAFQTFKVLRKVGK---NHDFSAGLIIGGKDL 185 Query 330 RDQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 +++ + + +++++ TPGRL + T S ++ L+LDEAD +L G++D +N + Sbjct 186 KEESERIHH-INMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAII 244 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP--TWVDLKGEDSVPDTVHHVVV 446 +P K+ Q ++ SAT + VK L+ + P WV K + S P T+ + Sbjct 245 ENLP------KKRQTLLFSAT-QTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYI 297 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + K ++ H Sbjct 298 VCELQH----------------------------------------KINVLYSFLRSHLK 317 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 ++I+F + + L + F + G + LHG ++ +R + F + Sbjct 318 KKSIVFFASCKEVQYLFRVFCKLQPG-------LPVLALHGKQQQMKRMEVYTCFVRKKA 370 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 L TD+AARG+D V +VI P++ Y+HR+GR R + G A+ ++ +EK Sbjct 371 AVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVLLPSEEKG 430 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTI------WYNEMQLLSEIEEHL 666 + R ++ + I + + Q L E + Sbjct 431 MVEQLAQRKVPVNEIKINPEKITDIQKRMQAFLAQDQELKEKAQRC 476 Score = 92.1 bits (227), Expect = 7e-18, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 8/121 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS+ + + + ++E + + T+IQ ++I L L G DVL AA+TGSGKT AF +P Sbjct 72 IQRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTLAFIVPA 131 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD---GLCCQSREVK 117 ++++Y Q G + S + + D GL +++K Sbjct 132 LELLYRL---QWTSADGLGVL--IISPTRELAFQTFKVLRKVGKNHDFSAGLIIGGKDLK 186 Query 118 E 118 E Sbjct 187 E 187 >sp|Q84TG1|RH57_ARATH DEAD-box ATP-dependent RNA helicase 57 OS=Arabidopsis thaliana OX=3702 GN=RH57 PE=2 SV=1 Length=541 Score = 253 bits (647), Expect = 3e-74, Method: Composition-based stats. Identities = 105/456 (23%), Positives = 166/456 (36%), Gaps = 70/456 (15%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG---YIVKSQHSGN 274 IPP +K+ A + + N E FK P A+ G + SG Sbjct 132 IPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGK 191 Query 275 A-------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 + + + +A+I+ P+RELA QT K+ K L+ + Sbjct 192 TFAFICPMLIKLKRPSTDGIRAVILSPARELAAQTAREGKKLIK---GSNFHIRLMTKPL 248 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 S L D+++ TP RL + K++LS+V +LVLDE+D L Q I+ + Sbjct 249 VKTADFSKL--WCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQIDCV 306 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + + SATL V++L+ IMH V + +++ +TV +V Sbjct 307 VKACSNPSIIRS-----LFSATLPD-SVEELARSIMHDAVRVIIGRKNTASETVKQKLVF 360 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + +L ++ E Sbjct 361 AGSEEGKLLA---------------------------------------LRQSFAESLNP 381 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 +IF ++K L K +H D P ER+ +++F+ G+ Sbjct 382 PVLIFVQSKERAKELYDEL---------KCENIRAGVIHSDLPPGERENAVDQFRAGEKW 432 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 LI TDV ARG+D G+ VIN PD Y+HRIGR GRA R G AI+ + Sbjct 433 VLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFL 492 Query 628 YHVCSS-RGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 ++ ++ GC W I Sbjct 493 RNIANTMMSSGCEVPSWIMSLKKKKWRKHRPRRDSI 528 Score = 89.4 bits (220), Expect = 3e-17, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 12/111 (11%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F+E+ G I + + E+ + PT IQ ++IP++L G + A TGSGKT AF Sbjct 136 LKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAF 195 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 P++ +K ++ G + S + G GS+ Sbjct 196 ICPML------IKLKRPSTDGIRAV--ILSPARELAAQTAREGKKLIKGSN 238 >sp|Q757I6|MAK5_EREGS ATP-dependent RNA helicase MAK5 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MAK5 PE=3 SV=1 Length=752 Score = 258 bits (660), Expect = 3e-74, Method: Composition-based stats. Identities = 102/509 (20%), Positives = 189/509 (37%), Gaps = 61/509 (12%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 G D A E+P N A VL+ F P + ++ KA DG+ + Sbjct 169 GLDEAEAPELPS-WTNTMKLSATVLQG------LSRLGFSNPTEIQLQSIPKALDGHDIM 221 Query 269 SQHSGNAQVTQTKFLP-----------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 + S + T +P + P LI P+RELA Q +++++ + Sbjct 222 GKASTGSGKTLAYGIPILEGIIRDDTDSRPIGLIFTPTRELAHQVTDHLREVGALLVKRN 281 Query 318 -LRELLIIGGVAARDQLSVLENG--VDIVVGTPGRLDDLVSTGKL---NLSQVRFLVLDE 371 + + GG++ + Q +L+ +VV TPGR +L+ + ++V LVLDE Sbjct 282 PYSIMCLTGGLSIQKQERLLKYKGSARVVVATPGRFLELLEKDQTLIDRFAKVDTLVLDE 341 Query 372 ADGLLSQGYSDFINRMHNQIPQVTS----DGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 AD LL G+ + R+ + + + ++ SAT KLS Sbjct 342 ADRLLQDGHFEEFERILKHLSRARKFTNGKKHGWKTMIYSATFSLDYFNKLSNTSWKK-- 399 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 E+ + + + H++ + + L + + + E E Sbjct 400 MKKAPSENEMEEVLKHLMTKIPFRGKPLI------------IDTNPEQKVASQIKESLIE 447 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + + Y + + ++FC L Y + S +H Sbjct 448 CLPTERDLYVYYFVTLYP-GTTLVFCNAIDSVKKLNAYLHNL---------KISAFQIHS 497 Query 548 DRKPHERKQNLERFKK--------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 R ++LE+F++ LI +DVAARG+DI G+ +VI+ LP Y Sbjct 498 SMLQKNRLKSLEKFQEQAKKNQALNKPTVLIASDVAARGLDIPGIQHVIHYHLPRSADVY 557 Query 600 VHRIGRVGRAERMGLAISLVATEKEK-VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 +HR GR RAE G+A+++ + ++ + + + + E + Sbjct 558 IHRSGRTARAENEGVAVTICSPQEAMGPLRKLRRVLAGKAGSKGKRWQNEIALLPVEPDI 617 Query 659 LSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 +S++ E + + +I D Sbjct 618 VSQLRERSRLASALADSEIATSSLSKDDN 646 Score = 92.5 bits (228), Expect = 5e-18, Method: Composition-based stats. Identities = 26/93 (28%), Positives = 47/93 (51%), Gaps = 2/93 (2%) Query 1 MAAFSE-MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +++ M + + Q + + + PT+IQ +SIP L G D++ A TGSGKT A+ IP Sbjct 178 LPSWTNTMKLSATVLQGLSRLGFSNPTEIQLQSIPKALDGHDIMGKASTGSGKTLAYGIP 237 Query 60 VIQIVYETLKDQQE-GKKGKTTIKTGASVLNKW 91 +++ + D + G T + V + Sbjct 238 ILEGIIRDDTDSRPIGLIFTPTRELAHQVTDHL 270 >sp|A6ZLH6|PRP5_YEAS7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=PRP5 PE=3 SV=1 Length=849 Score = 260 bits (665), Expect = 3e-74, Method: Composition-based stats. Identities = 100/482 (21%), Positives = 187/482 (39%), Gaps = 70/482 (15%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL---PNAPK 288 L L + + +SK G + QV + L P Sbjct 273 KLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPM 332 Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 LI+ P+RELA Q + +F + + +R + GG + Q++ L+ G +IVV TPG Sbjct 333 GLILAPTRELALQIHEEVTKFTE--ADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPG 390 Query 349 RLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 R D++ L+ ++ F+V+DEAD L G+ I ++ + Q ++ Sbjct 391 RFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTV------RPDKQCVL 444 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT + ++ + +++H P + + + V + V + + ++ + H R Sbjct 445 FSATFPN-KLRSFAVRVLHSPISITINSKGMVNENVKQKFRICHSEDEKFDNLVQLIHER 503 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 ++ + G +S E +AIIF ++ CD + + Sbjct 504 SEFFDEVQSENDGQSSDV-------------------EEVDAKAIIFVSSQNICDFISKK 544 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G +H + ER NLE+FK+ L+CT+V +RG+++ V Sbjct 545 LLNAG---------IVTCAIHAGKPYQERLMNLEKFKREKNSILLCTEVLSRGLNVPEVS 595 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VI YVH GR R R G AI+L+ ++ Y + + Sbjct 596 LVIIYNAVKTFAQYVHTTGRTARGSRSGTAITLLLHDELSGAYILSKA------------ 643 Query 646 DGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHV 705 + E++ L ++ +++ +F+ + G+ R + G KG Sbjct 644 -----MRDEEIKALDPLQA----------KELQEMSAKFESGMKKGKFRLSKGFGGKGLE 688 Query 706 DI 707 +I Sbjct 689 NI 690 Score = 93.7 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 27/124 (22%), Positives = 62/124 (50%), Gaps = 10/124 (8%) Query 1 MAAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ + + E++ + T IQ++++P I+ G DV+ ++TGSGKT ++ +P Sbjct 254 VTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLP 313 Query 60 VIQIVYETLKDQQEGKKGKT-TIKTGASVLNKWQMNPYDRGSAFAIGSDG----LCCQSR 114 +++ V K Q+ K +T + + + + ++ + F C Sbjct 314 LLRQV----KAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGS 369 Query 115 EVKE 118 E+K+ Sbjct 370 EMKK 373 >sp|P21372|PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PRP5 PE=1 SV=1 Length=849 Score = 260 bits (665), Expect = 3e-74, Method: Composition-based stats. Identities = 100/482 (21%), Positives = 187/482 (39%), Gaps = 70/482 (15%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL---PNAPK 288 L L + + +SK G + QV + L P Sbjct 273 KLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPM 332 Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 LI+ P+RELA Q + +F + + +R + GG + Q++ L+ G +IVV TPG Sbjct 333 GLILAPTRELALQIHEEVTKFTE--ADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPG 390 Query 349 RLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 R D++ L+ ++ F+V+DEAD L G+ I ++ + Q ++ Sbjct 391 RFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTV------RPDKQCVL 444 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT + ++ + +++H P + + + V + V + + ++ + H R Sbjct 445 FSATFPN-KLRSFAVRVLHSPISITINSKGMVNENVKQKFRICHSEDEKFDNLVQLIHER 503 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 ++ + G +S E +AIIF ++ CD + + Sbjct 504 SEFFDEVQSENDGQSSDV-------------------EEVDAKAIIFVSSQNICDFISKK 544 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + G +H + ER NLE+FK+ L+CT+V +RG+++ V Sbjct 545 LLNAG---------IVTCAIHAGKPYQERLMNLEKFKREKNSILLCTEVLSRGLNVPEVS 595 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VI YVH GR R R G AI+L+ ++ Y + + Sbjct 596 LVIIYNAVKTFAQYVHTTGRTARGSRSGTAITLLLHDELSGAYILSKA------------ 643 Query 646 DGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHV 705 + E++ L ++ +++ +F+ + G+ R + G KG Sbjct 644 -----MRDEEIKALDPLQA----------KELQEMSAKFESGMKKGKFRLSKGFGGKGLE 688 Query 706 DI 707 +I Sbjct 689 NI 690 Score = 93.7 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 27/124 (22%), Positives = 62/124 (50%), Gaps = 10/124 (8%) Query 1 MAAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ + + E++ + T IQ++++P I+ G DV+ ++TGSGKT ++ +P Sbjct 254 VTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLP 313 Query 60 VIQIVYETLKDQQEGKKGKT-TIKTGASVLNKWQMNPYDRGSAFAIGSDG----LCCQSR 114 +++ V K Q+ K +T + + + + ++ + F C Sbjct 314 LLRQV----KAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGS 369 Query 115 EVKE 118 E+K+ Sbjct 370 EMKK 373 >sp|Q86B47|Y8611_DROME Probable ATP-dependent RNA helicase CG8611 OS=Drosophila melanogaster OX=7227 GN=CG8611 PE=1 SV=1 Length=975 Score = 262 bits (669), Expect = 4e-74, Method: Composition-based stats. Identities = 97/437 (22%), Positives = 175/437 (40%), Gaps = 38/437 (9%) Query 232 VLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL---PNAPK 288 +L EL + + + S+ G + + + + + Sbjct 345 LLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVELLQKQQPRIQRKDGVL 404 Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 AL++ P+REL QT I++ K + ++GG + + + + L G++I++GTPG Sbjct 405 ALVIVPTRELVMQTYELIQKLVK--PYTWIVPGSLLGGESRKSEKARLRKGINILIGTPG 462 Query 349 RL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK-----RLQ 402 RL D L+ T L++++FL+LDEAD LL GY + ++ I + ++ + +LQ Sbjct 463 RLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQ 522 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL S V++L+ + P ++D +++ + + L E Sbjct 523 RMLLSATLTSQ-VQQLAGLTLKNPLYID-NSDEAASAALKSKDGYQKETIEALLEVDDGL 580 Query 463 HIRTDDVHAKDNTRPGANSPEMW---SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 +DV + + + L A K +AI+F T Sbjct 581 GEYQEDVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMV 640 Query 520 DNLEQYFIQ--------------------QGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + + G P +G +F LHG ER+ Sbjct 641 NFHHDMLNEALTRRVLDEEDEQEKGDSDDDGDIPLLQGLRF--FKLHGSMTQTERQGVFR 698 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 F+ L+ TDV RGID+ + V+ T P ++VHR+GR RA R G A+ + Sbjct 699 GFRDCASCVLLATDVVGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFL 758 Query 620 ATEKEKVWYHVCSSRGK 636 + + H+ R + Sbjct 759 TPSEAQFVRHLEKKRIR 775 Score = 83.6 bits (205), Expect = 4e-15, Method: Composition-based stats. Identities = 24/102 (24%), Positives = 51/102 (50%), Gaps = 4/102 (4%) Query 2 AAFSEMGVMPEIAQAVEEM-DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + S +G+ P + +E++ T +Q ++IP +L G DVL+ ++TGSGKT A+++P+ Sbjct 327 SKISTLGLHPHAVKNLEDLLSIRELTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPL 386 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 ++++ + Q + + + M Y+ Sbjct 387 VELLQKQQPRIQ---RKDGVLALVIVPTRELVMQTYELIQKL 425 >sp|Q9H8H2|DDX31_HUMAN Probable ATP-dependent RNA helicase DDX31 OS=Homo sapiens OX=9606 GN=DDX31 PE=1 SV=2 Length=851 Score = 260 bits (664), Expect = 5e-74, Method: Composition-based stats. Identities = 89/421 (21%), Positives = 182/421 (43%), Gaps = 37/421 (9%) Query 231 CVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY-------IVKSQHSGNAQVTQTKFL 283 VLK + + + + S+ G +V+S + +++ ++ Sbjct 247 TVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRS--- 303 Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 + P AL++ P+RELA Q+ + +++ K + +++GG + + + L G++I+ Sbjct 304 -DGPYALVLVPTRELALQSFDTVQKLLK--PFTWIVPGVLMGGEKRKSEKARLRKGINIL 360 Query 344 VGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 + TPGRL D + T ++ S++R+LV DEAD +L G+ I + N V ++ ++ Q Sbjct 361 ISTPGRLVDHIKSTKNIHFSRLRWLVFDEADRILDLGFEKDITVILN---AVNAECQKRQ 417 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SATL + V +L++ +H P + + + +NPK D+ + + Sbjct 418 NVLLSATL-TEGVTRLADISLHDPVSISVLDKSH---------DQLNPK-DKAVQEVCPP 466 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 + + S+ + + ++ K + + ++F + + Sbjct 467 PAGDKLDSFAIPESLKQHVTVVPSKLRLVCLAAFILQKCKFEEDQKMVVFFSSCELVEFH 526 Query 523 EQYFIQ---------QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 F+Q G + + LHG + ER + F L+CTD Sbjct 527 YSLFLQTLLSSSGAPASGQLPSASMRLKFLRLHGGMEQEERTAVFQEFSHSRRGVLLCTD 586 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 VAARG+D+ V +++ P Y+HRIGR R G ++ ++A + + + S Sbjct 587 VAARGLDLPQVTWIVQYNAPSSPAEYIHRIGRTARIGCHGSSLLILAPSEAEYVNSLASH 646 Query 634 R 634 + Sbjct 647 K 647 Score = 90.6 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 4/102 (4%) Query 2 AAFSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 AAF E+G+ P + + + T +Q +SIP++L G D L+ ++TGSGKT A+ IPV Sbjct 230 AAFHELGLHPHLISTINTVLKMSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPV 289 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +Q + Q + + + +D Sbjct 290 VQSLQAMESKIQ---RSDGPYALVLVPTRELALQSFDTVQKL 328 >sp|Q9Y7C4|ROK1_CANAL ATP-dependent RNA helicase CHR1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CHR1 PE=3 SV=2 Length=578 Score = 253 bits (646), Expect = 7e-74, Method: Composition-based stats. Identities = 99/512 (19%), Positives = 198/512 (39%), Gaps = 80/512 (16%) Query 204 KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPD 263 F + ++ ++ + ++ + + +A + Sbjct 128 SFQDMIGRFHINKKVLSNLIDNEFVEPTPIQCESIPITLNNRD--------LIACAPTGS 179 Query 264 GYIVKSQHSGNAQV-TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 G + Q+ ++ + + LI+ P+ ELA Q ++ + ++ + Sbjct 180 GKTLAFLIPLVQQILSKNVSKNHGIRGLIISPTNELAVQIFQELEIITRGC--KQINVAI 237 Query 323 IIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 + +A++ +++++ DI+V TP RL D+V G ++LS++ L++DEAD L G++ Sbjct 238 LSKQLASKLNNNIIKSSKYDIIVSTPLRLIDVVKQGNMDLSKIEQLIIDEADKLFDHGFA 297 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + + + +++ + SAT+ S V++++ IM P + + +++ +T+ Sbjct 298 EQTDEILTHC-----TNPKIRKSIFSATIPS-SVEEMAHSIMKDPLRIIIGHKEAASNTI 351 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 +V + +L Sbjct 352 DQKLVFTGNEQGKLLAIRQMIQ-------------------------------------- 373 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + IIF ++ L + + + +H +R P +R++ ++RF Sbjct 374 QGEFKPPIIIFLQSITRAKALFHELLYD---------RLNVDVIHAERTPKQREEVIKRF 424 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 K GD+ LI TDV ARG+D GV VIN +P Q YVHRIGR GR + G A++ Sbjct 425 KNGDIWVLITTDVLARGVDFKGVNLVINYDVPQSAQAYVHRIGRTGRGGKAGKAVTFFTK 484 Query 622 EKEKVWYHVCS-SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT-------ISQV 673 E +K + + + GC + G + W +M LS+ E+ T IS V Sbjct 485 EDDKAIKPILNVMKQSGC-------NDGYSQWMEDMGKLSKKEKKQIKTHEIQRKKISTV 537 Query 674 EPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHV 705 IK + + ++R Sbjct 538 PKVIKQKRKQRQDMIAASKRRKQESKQESKQE 569 Score = 94.4 bits (233), Expect = 9e-19, Method: Composition-based stats. Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F +M + ++ + + +++ PT IQ ESIP+ L D++ A TGSGKT AF Sbjct 126 IGSFQDMIGRFHINKKVLSNLIDNEFVEPTPIQCESIPITLNNRDLIACAPTGSGKTLAF 185 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQ 92 IP++Q + + G +G T + +Q Sbjct 186 LIPLVQQILSKNVSKNHGIRGLIISPTNELAVQIFQ 221 >sp|A4RGU2|DBP4_PYRO7 ATP-dependent RNA helicase DBP4 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP4 PE=3 SV=1 Length=798 Score = 258 bits (659), Expect = 8e-74, Method: Composition-based stats. Identities = 93/407 (23%), Positives = 162/407 (40%), Gaps = 66/407 (16%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA-PKALIVEPSRELAEQTLNNIKQFK 310 + +K G + ++ + ++ A AL++ P+RELA QT +++ Sbjct 86 GRDILGAAKTGSGKTLAFLVPLLEKLYREQWTQEAKLGALVLSPTRELAVQTFQVLRKIG 145 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVL 369 ++ L+IGG + R++ L ++I++GTPGR L L T ++ ++ LVL Sbjct 146 RH---HLFSAGLVIGGKSVREEAEALSR-MNILIGTPGRILQHLDQTHGFDVDNLQLLVL 201 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 DEAD ++ G+ ++ + +P Q ++ SAT S V L+ + P +V Sbjct 202 DEADRIMDLGFQRDVDALVQHLPTT------RQTLLFSAT-QSKKVSDLARLSLKDPEYV 254 Query 430 DLKGEDS--VPDTVHH--VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + E + P T+ +V P+ K D LW Sbjct 255 SVHAEATTATPSTLQQHYIVTPLPEKLDTLW----------------------------- 285 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 IK + + ++F + + + F Q G + + Sbjct 286 -------------GFIKANLKSKMVVFLSSGKQVRFVYESFRQMQPG-------IPLLHM 325 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG +K R +RF L TDV ARGID GV +V+ V P++ +Y+HR+GR Sbjct 326 HGRQKQLARLDVTKRFDSSKHACLFATDVIARGIDFTGVDWVVQVDAPEDTDDYIHRVGR 385 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIW 652 R ER G A+ + +E + K+ +I Sbjct 386 TARYEREGKAVIFLDPSEEAGMLKRLERKKVPITKVTAKDSKKKSIR 432 Score = 97.9 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 34/95 (36%), Positives = 53/95 (56%), Gaps = 5/95 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 AF+E+ + A+ V + + TDIQA +IPL L G D+L AA+TGSGKT AF +P++ Sbjct 49 KAFAELPLSEPTAKGVRDSHFETLTDIQARAIPLALKGRDILGAAKTGSGKTLAFLVPLL 108 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + +Y + QE K G + S + + + Sbjct 109 EKLYR-EQWTQEAKLGALVL----SPTRELAVQTF 138 >sp|A2QWW0|MAK5_ASPNC ATP-dependent RNA helicase mak5 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=mak5 PE=3 SV=1 Length=766 Score = 257 bits (657), Expect = 1e-73, Method: Composition-based stats. Identities = 103/457 (23%), Positives = 180/457 (39%), Gaps = 50/457 (11%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDGYI 266 + LGL+ EI + +++ + + + G +A + Sbjct 195 ESLGLSPEILTSLSKMKFTTPTLVQKSCIPQILDGHDVIGKASTGSGKTLAFGIPILEHY 254 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + + K AP ALI+ P+RELA Q +I + + R L+ GG Sbjct 255 LEKRRQDLRAGKEEKKKDTAPIALIMSPTRELAHQLAKHIGELALHAPGSNARIALLTGG 314 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDF 383 ++ + Q VL G DIV+GTPGR+ +++S+G+ +S+++FLV+DEAD LLS+G+ Sbjct 315 LSVQKQQRVLA-GADIVIGTPGRVWEVLSSGQGLIRKMSEIKFLVIDEADRLLSEGHFKE 373 Query 384 INRMHNQIPQV---------------TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 + + +V Q +V SAT H +KL+ K Sbjct 374 AEEILGALDRVEEGNFGGEESEDEEKEDARSERQTLVFSATFHRDLQQKLAGK-----AR 428 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 S +++ + L ++L + + ++ E E Sbjct 429 WTGGDIMSNKESMEY-----------LLQKLKFREEKPKFIDVNPVSQMAEGLKEGIVEC 477 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + K Y + + + ++F + L Q G + LH Sbjct 478 GAMEKDLYLYTLLLYNPKHRTLVFTNSISAVRRLTQLLQNLG---------LPALALHSS 528 Query 549 RKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 R +++ERF L+ TDVAARG+DI G+ +VI+ P YVHR GR Sbjct 529 MAQKARLRSVERFSSPTSDPSSILVATDVAARGLDIKGIDFVIHYHAPRAADTYVHRSGR 588 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 RA G ++ + A E+ + + N + Sbjct 589 TARAGASGKSVIICAPEEMVGVVRLAAKVHANMANGK 625 Score = 116 bits (291), Expect = 1e-25, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 68/162 (42%), Gaps = 11/162 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +A+ +G+ PEI ++ +M + PT +Q IP IL G DV+ A TGSGKT AF IP++ Sbjct 192 SAWESLGLSPEILTSLSKMKFTTPTLVQKSCIPQILDGHDVIGKASTGSGKTLAFGIPIL 251 Query 62 QIVYETLKD-----QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV 116 + E + ++E KK I S + A+ + G + + Sbjct 252 EHYLEKRRQDLRAGKEEKKKDTAPIALIMSPTRELAHQLAKHIGELALHAPGSNARIALL 311 Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDL 158 + + ++ G ++ G W + + L Sbjct 312 TGGLSVQKQQRVLAGA---DIVIGTPGRV---WEVLSSGQGL 347 >sp|Q8GXD6|RH49_ARATH DEAD-box ATP-dependent RNA helicase 49 OS=Arabidopsis thaliana OX=3702 GN=RH49 PE=2 SV=2 Length=558 Score = 252 bits (643), Expect = 1e-73, Method: Composition-based stats. Identities = 88/378 (23%), Positives = 149/378 (39%), Gaps = 55/378 (15%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + P+ +I+ P+REL+ Q + F + P + +L++GG ++ Sbjct 80 RSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTL--PNVNSVLLVGGREVEADMNT 137 Query 336 LEN-GVDIVVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 LE G ++++GTPGRL D++ + L+ + L+LDEAD LL G+ +N + +++P Sbjct 138 LEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLP- 196 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 K+ + + SAT + V L++ + V E Sbjct 197 -----KQRRTGLFSAT-QTQAVADLAKAGLRNAMEVISGAE------------------- 231 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 +K T G + EA + K V + E+K + ++F Sbjct 232 -----------------SKSKTSSGLYCEYLKCEADQ--KSSQLVHLLIENKNKKLVVFF 272 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 T D + S HG R L F + L+CTD Sbjct 273 MTCACVDYWGLVLSKIPTL-----KSISFFSTHGKMDQKGRDTALASFTEASSGVLLCTD 327 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 VAARG+DI G+ YV+ P + ++HR+GR R ER G AI + ++ + Sbjct 328 VAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFLMPKETD-YVEFMRI 386 Query 634 RGKGCYNTRLKEDGGCTI 651 R + E+ I Sbjct 387 RRVPLQERKCSENASDVI 404 Score = 91.3 bits (225), Expect = 7e-18, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 5/111 (5%) Query 1 MAAFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 + FSE+ + +I +A++ + + T +QAE+IP + DV++ A TGSGKT AF + Sbjct 13 LPRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLL 72 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 P I+I+ + K + S + + F + Sbjct 73 PFIEII---RRSNSYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNV 120 >sp|P0CQ82|DBP4_CRYNJ ATP-dependent RNA helicase DBP4 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP4 PE=3 SV=1 Length=859 Score = 259 bits (661), Expect = 1e-73, Method: Composition-based stats. Identities = 96/446 (22%), Positives = 172/446 (39%), Gaps = 69/446 (15%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L ++ + +K+ +++ + + +K G + Sbjct 65 LPMSSKTQKGLKSSHFLNPTPIQSLAIPPAL--------QARDILGSAKTGSGKTLAFLI 116 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ K+ P + A+++ P+RELA QT ++ KY + L+IGG + Sbjct 117 PLLERLYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYHN---FSAGLVIGGKPLK 173 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 ++ L ++I++ TPGRL + + + S V+ LVLDEAD LL G+ + + + Sbjct 174 EEQERL-GRMNILIATPGRLLQHLDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIVS 232 Query 390 QIPQV---TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL---KGEDSVPDTVHH 443 V Q ++ SAT S D+ L++ ++ P ++ E +P + Sbjct 233 HFSPVQTAPGSRPSRQTLLFSAT-QSKDLAALAKLSLYEPLYISCNKPGEEGVMPANLEQ 291 Query 444 V--VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 VVP+ K D LW + Sbjct 292 YYAVVPLERKLDALW------------------------------------------GFV 309 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K H + I+F + + F + + LHG +K R +RF Sbjct 310 KSHLKMKGIVFVTSGKQARRVRFIF----ETFRRLHPGLPLMHLHGKQKQPTRLDIFQRF 365 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 LICTDVAARG+D V +VI + PD+ Y+HR+GR R + G A++++ Sbjct 366 SSSKSALLICTDVAARGLDFPAVDWVIQLDCPDDVDTYIHRVGRTARYQSAGTALTILCP 425 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDG 647 +E+ + ++KE Sbjct 426 SEEEGMKTRWGEKAIEVKRIKIKEGK 451 Score = 96.7 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 27/104 (26%), Positives = 49/104 (47%), Gaps = 5/104 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FSE+ + + + ++ +L PT IQ+ +IP L D+L +A+TGSGKT AF IP+ Sbjct 59 ITLFSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPL 118 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 ++ +Y +G S + + + + Sbjct 119 LERLYLEKWGPMDG-----LGAVVISPTRELAVQTFMQLRDIGK 157 >sp|P0CQ83|DBP4_CRYNB ATP-dependent RNA helicase DBP4 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP4 PE=3 SV=1 Length=859 Score = 259 bits (661), Expect = 1e-73, Method: Composition-based stats. Identities = 96/446 (22%), Positives = 172/446 (39%), Gaps = 69/446 (15%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L ++ + +K+ +++ + + +K G + Sbjct 65 LPMSSKTQKGLKSSHFLNPTPIQSLAIPPAL--------QARDILGSAKTGSGKTLAFLI 116 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ K+ P + A+++ P+RELA QT ++ KY + L+IGG + Sbjct 117 PLLERLYLEKWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYHN---FSAGLVIGGKPLK 173 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 ++ L ++I++ TPGRL + + + S V+ LVLDEAD LL G+ + + + Sbjct 174 EEQERL-GRMNILIATPGRLLQHLDSTVGFDSSAVKVLVLDEADRLLDLGFLPALKAIVS 232 Query 390 QIPQV---TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL---KGEDSVPDTVHH 443 V Q ++ SAT S D+ L++ ++ P ++ E +P + Sbjct 233 HFSPVQTAPGSRPSRQTLLFSAT-QSKDLAALAKLSLYEPLYISCNKPGEEGVMPANLEQ 291 Query 444 V--VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 VVP+ K D LW + Sbjct 292 YYAVVPLERKLDALW------------------------------------------GFV 309 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K H + I+F + + F + + LHG +K R +RF Sbjct 310 KSHLKMKGIVFVTSGKQARRVRFIF----ETFRRLHPGLPLMHLHGKQKQPTRLDIFQRF 365 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 LICTDVAARG+D V +VI + PD+ Y+HR+GR R + G A++++ Sbjct 366 SSSKSALLICTDVAARGLDFPAVDWVIQLDCPDDVDTYIHRVGRTARYQSAGTALTILCP 425 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDG 647 +E+ + ++KE Sbjct 426 SEEEGMKTRWGEKAIEVKRIKIKEGK 451 Score = 96.7 bits (239), Expect = 3e-19, Method: Composition-based stats. Identities = 27/104 (26%), Positives = 49/104 (47%), Gaps = 5/104 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FSE+ + + + ++ +L PT IQ+ +IP L D+L +A+TGSGKT AF IP+ Sbjct 59 ITLFSELPMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPL 118 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 ++ +Y +G S + + + + Sbjct 119 LERLYLEKWGPMDG-----LGAVVISPTRELAVQTFMQLRDIGK 157 >sp|Q4PDT1|DBP3_USTMA ATP-dependent RNA helicase DBP3 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP3 PE=3 SV=1 Length=585 Score = 253 bits (645), Expect = 1e-73, Method: Composition-based stats. Identities = 99/404 (25%), Positives = 168/404 (42%), Gaps = 69/404 (17%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS- 269 D + + + +Q ++ ++ V +++ G Sbjct 163 DGKVDAAVKKTLDSQGFSTPTPIQACCWPVLLQNKD--------VVGIAETGSGKTFAFG 214 Query 270 QHSGNAQVTQTKFLPNA--------PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 + VT+ K L + L++ P+RELA QT N+ + K + + + Sbjct 215 LPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTEENMAKLGK---SMGIGMI 271 Query 322 LIIGGVAARDQLSVLEN--GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG 379 + GGV+ ++Q+ +L V IVVGTPGR+ D+ G L+LS V +LVLDEAD +L +G Sbjct 272 CLYGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEADRMLDKG 331 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + I + S + + SAT V+ L+E M+ P V + ++ Sbjct 332 FEPDIRAIIGM---CKSREEGRHTSMFSATWPPA-VRGLAESFMNGPVRVTVGSDE---- 383 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + N + ++ E L + + + ++ Sbjct 384 ------LSANRRVEQTVEVLADGYAKERRL------------------------NDFLRS 413 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + D+ +IF K + +EQ + G F +HGD +ER +LE Sbjct 414 VNAQRSKDKILIFALYKKEAQRIEQTLRRGG---------FKVSGIHGDLGQNERIASLE 464 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 RFK + L+ TDVAARG+DI V +V+N T P ++YVHRI Sbjct 465 RFKSAETPLLVATDVAARGLDIPNVEHVVNYTFPLTIEDYVHRI 508 Score = 96.0 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 6/129 (5%) Query 1 MAAFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 M F E+ V + + ++ + PT IQA P++L DV+ AETGSGKT AF + Sbjct 156 MVDFRELDGKVDAAVKKTLDSQGFSTPTPIQACCWPVLLQNKDVVGIAETGSGKTFAFGL 215 Query 59 PVIQIVYETLKDQQEGK---KGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCCQSR 114 P +Q + K GK KG + + + + + G+ C Sbjct 216 PALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTEENMAKLGKSMGIGMICLYG 275 Query 115 EVKEWHGCR 123 V + R Sbjct 276 GVSKQEQVR 284 >sp|Q6BXG0|DBP4_DEBHA ATP-dependent RNA helicase DBP4 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP4 PE=3 SV=2 Length=766 Score = 257 bits (656), Expect = 1e-73, Method: Composition-based stats. Identities = 87/461 (19%), Positives = 168/461 (36%), Gaps = 74/461 (16%) Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVA 257 +D+ + DL ++ E +K + ++ + + E+ + Sbjct 40 VDEKSISQFS---DLPISEETARGLKEASFASLTDIQKKTIPISLKGED--------VMG 88 Query 258 LSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 +K G + + + K + ALI+ P+RELA Q + + K+ + Sbjct 89 TAKTGSGKTLAFLIPTIESLIRNKITEYDGLAALIISPTRELAVQIFEVLVKIGKHNN-- 146 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEADGL 375 L+ GG + + + ++I+VGTPGR+ ++ + S ++ LVLDEAD Sbjct 147 -FSAGLVTGGKDVKYEKERVSK-MNILVGTPGRISQHLNESVGMETSNLQVLVLDEADRC 204 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L G+ I+ + +P Q ++ SAT S VK L+ + P V + + Sbjct 205 LDMGFKKQIDNILGHLP------PTRQTLLFSAT-QSDSVKDLARLSLANPKRVGISSDQ 257 Query 436 S---VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 P+++ + + Sbjct 258 ELSATPESLEQYYIKIPLDE---------------------------------------- 277 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + IK H + ++F + + F G S + L+G K Sbjct 278 KLDVLWSFIKSHLKSKILVFFSSSKQVQYAYETFRTLQPG-------ISLLKLYGRHKQT 330 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 R + +F + L TD+ ARG+D + +V+ + P++ YVHR+GR R R Sbjct 331 SRMETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQIDCPEDAATYVHRVGRAARFGRA 390 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 G ++ ++ +E ++ +K+ TI Sbjct 391 GKSLMMLLPSEENGMLKRLNNNKIELKFMNIKQKNKKTIRP 431 Score = 95.2 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 5/107 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ FS++ + E A+ ++E + TDIQ ++IP+ L G DV+ A+TGSGKT AF IP Sbjct 45 ISQFSDLPISEETARGLKEASFASLTDIQKKTIPISLKGEDVMGTAKTGSGKTLAFLIPT 104 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 I+ + ++++ G + S + + ++ ++ Sbjct 105 IESL---IRNKITEYDGLAAL--IISPTRELAVQIFEVLVKIGKHNN 146 >sp|Q0CZS8|HAS1_ASPTN ATP-dependent RNA helicase has1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=has1 PE=3 SV=1 Length=576 Score = 252 bits (644), Expect = 1e-73, Method: Composition-based stats. Identities = 84/390 (22%), Positives = 139/390 (36%), Gaps = 65/390 (17%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFK 310 + +K G + ++ +F P N +I+ P+RELA Q K+ Sbjct 135 GRDILGAAKTGSGKTLAFLIPAVEMLSALRFKPRNGTGVIIITPTRELALQIFGVAKELC 194 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVL 369 ++ ++IGG R + L GV++++ TPGRL D + +T + LVL Sbjct 195 EFHSQTY---GIVIGGANRRAEAEKLNKGVNLLIATPGRLLDHLQNTQGFVYKNCKVLVL 251 Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTW 428 DEAD L G+ + ++ +P + Q ++ SAT + V+ L+ + P + Sbjct 252 DEADRCLDVGFEAELRQIVKILP-----SEERQTLLFSAT-QTTKVEDLARISLKPGPLY 305 Query 429 VDLK--GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 +++ E + D V + L + Sbjct 306 INVDHRKEHATVDGVDQGYIICEADKRFLLLFTFLKKNLKKKIII--------------- 350 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 F + + LH Sbjct 351 -------------------------FFSSCNAVKYYADLL---------NYIDLPVLALH 376 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 G K R Q F LICTDVAARG+DI V Y+I PDE + Y+HR+GR Sbjct 377 GKLKQQTRTQRFFEFCNATQGTLICTDVAARGLDIPAVDYIIQFDPPDEPKAYIHRVGRT 436 Query 607 GRA--ERMGLAISLVATEKEKVWYHVCSSR 634 R ++G +I L+ + + +R Sbjct 437 ARGTKGKIGRSIMLLQPSEVGFLNVLREAR 466 Score = 105 bits (263), Expect = 2e-22, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E+ + +A+ +M + T+IQ +IP L G D+L AA+TGSGKT AF IP +++ Sbjct 100 FDELNLSEPTMKAIRQMGFETMTEIQQRTIPPTLAGRDILGAAKTGSGKTLAFLIPAVEM 159 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + G T + + + + Sbjct 160 LSALRFKPRNG-----TGVIIITPTRELALQIF 187 >sp|Q5AF95|DBP4_CANAL ATP-dependent RNA helicase DBP4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP4 PE=3 SV=1 Length=765 Score = 256 bits (655), Expect = 2e-73, Method: Composition-based stats. Identities = 88/463 (19%), Positives = 160/463 (35%), Gaps = 72/463 (16%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF 255 D S+ DL + +K ++ + E+ Sbjct 38 YDPKTDEASVSQ-FSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGED--------L 88 Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 + ++ G + + + K + ALIV P+RELA Q + + KY Sbjct 89 MGTARTGSGKTLAFLIPVIESLIRNKITEYDGLAALIVSPTRELAVQIFEVLTKIGKYN- 147 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEAD 373 L+ GG + + + ++I+VGTPGR+ ++ + S ++ LVLDEAD Sbjct 148 --TFSAGLVTGGKDVQFEKERVSR-MNILVGTPGRISQHLNEAVGMETSNLQVLVLDEAD 204 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 L G+ I+ + +P Q ++ SAT S V L+ + P + + Sbjct 205 RCLDMGFKKQIDNILGHLPTT------RQTLLFSAT-QSESVNDLARLSLTNPNKIGVSS 257 Query 434 EDS---VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 + P+++ V V Sbjct 258 DQEVSATPESLEQYYVKVPLDE-------------------------------------- 279 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 K + IK H + ++F + + F G S + L+G K Sbjct 280 --KLDVLWSFIKSHLKSKILVFFSSSKQVQYTYETFRTLQPG-------ISLMKLYGRHK 330 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 R + +F + L TD+ ARG+D + +V+ V P++ YVHR+GR R Sbjct 331 QTSRLETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRSARFG 390 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 R G ++ ++ +E+ +K+ +I Sbjct 391 RKGKSLLMLLPSEEEGMLKRLKIHKIEPKLMNIKQKSKKSIRP 433 Score = 94.8 bits (234), Expect = 1e-18, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 5/107 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ FS++ + + ++E ++ TDIQ ++IP+ L G D++ A TGSGKT AF IPV Sbjct 47 VSQFSDLPITENTLKGLKEATFVSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPV 106 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 I+ + ++++ G + S + + ++ + + Sbjct 107 IESL---IRNKITEYDGLAAL--IVSPTRELAVQIFEVLTKIGKYNT 148 >sp|A7EAY2|MAK5_SCLS1 ATP-dependent RNA helicase mak5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=mak5 PE=3 SV=1 Length=780 Score = 257 bits (656), Expect = 2e-73, Method: Composition-based stats. Identities = 109/485 (22%), Positives = 174/485 (36%), Gaps = 72/485 (15%) Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP--------------- 284 + F P A+ + G+ V + S + T +P Sbjct 226 MALSKMGFSKPTPIQSEAIPEVLAGHDVVGKASTGSGKTLAFGIPIVEKWLEVYGELDED 285 Query 285 ------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 P ALI+ P+RELA Q +I K + + GG++ + Q L Sbjct 286 ELKKSTRPPTALILSPTRELAHQLTEHITTLCKGMPTSPY-VAAVTGGLSVQKQQRQLSK 344 Query 339 GVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 DI++GTPGRL +++S+ L QVRFLV+DEAD LL+ G+ + N + + Sbjct 345 -ADIIIGTPGRLWEVISSSNELSAGLKQVRFLVIDEADRLLTDGHFKEAEEILNALDRTH 403 Query 396 SDG--------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + Q +V SAT H +KL+ K Sbjct 404 GNEDDDEEDTLPPRQTLVFSATFHKGLQQKLAGKG-------------------KQSFKD 444 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + + L ++L + V ++ AN E E K Y + H Sbjct 445 DSQSMEYLLKKLNFREEKPKFVDVNPISQMAANLKEGMVECGGEEKDLYLYSLLLHHPNQ 504 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF--KKGD 565 + +IF + L LH R +++E+F Sbjct 505 RTLIFTNSIHSVRRLTPMLQTL---------NIPAHSLHSQMIQKARMRSIEKFSRTNNT 555 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 L+ TDVAARG+DI GV VI+ LP YVHR GR RA G +I L E+ Sbjct 556 GSVLVATDVAARGLDIGGVQLVIHYHLPRTADMYVHRSGRTARAAASGSSILLCGPEEVV 615 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWY-----NEMQLLSEIEEHLNCTISQVEPDIKVP 680 + + K L +G + +Y + +++S ++ + + + Sbjct 616 GTRRLVA---KVHAQNALHGEGKKSKFYIRSLDIDRRVVSRLKPRVTLAKKIADSALAKE 672 Query 681 VDEFD 685 D Sbjct 673 KKGHD 677 Score = 113 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 59/278 (21%), Positives = 105/278 (38%), Gaps = 33/278 (12%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ + E+ + A+ +M + PT IQ+E+IP +L G DV+ A TGSGKT AF IP+ Sbjct 212 VSGWVELDLSSNTLMALSKMGFSKPTPIQSEAIPEVLAGHDVVGKASTGSGKTLAFGIPI 271 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLN---KWQMNPYDRGSAF----------AIGSD 107 ++ E + E + K+T A +L+ + + + A + Sbjct 272 VEKWLEVYGELDEDELKKSTRPPTALILSPTRELAHQLTEHITTLCKGMPTSPYVAAVTG 331 Query 108 GLCCQS--REVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGF 165 GL Q R++ + T G +EV G Q + + Sbjct 332 GLSVQKQQRQLSKADIIIGTPGR-----LWEV-ISSSNELSAG--LKQVRFLVIDEADRL 383 Query 166 GFGGTGKKSHN----KQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPH 221 G K++ + E+ DT+ + + FS GL ++ Sbjct 384 LTDGHFKEAEEILNALDRTHGNEDDDEEDTL-----PPRQTLVFSATFHK-GLQQKLAGK 437 Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 K + ++ K NF EE+ KF + ++ Sbjct 438 GKQSFKDDSQSMEYLLKKLNFREEKPKFVDVNPISQMA 475 >sp|Q0DBU5|RH31_ORYSJ DEAD-box ATP-dependent RNA helicase 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0526600 PE=3 SV=2 Length=547 Score = 251 bits (641), Expect = 2e-73, Method: Composition-based stats. Identities = 93/469 (20%), Positives = 176/469 (38%), Gaps = 76/469 (16%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 L+ +K ++ A L +A +K G V Sbjct 86 LSPLTLKGVKAAGYERMTAVQEATLPIIL--------KGKDVLAKAKTGTGKTVAFLLPA 137 Query 274 NAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 V++ + ++V P+RELA+Q + K+ +P + L+IGG Sbjct 138 IEVVSKLPPIDCDKKRPPISVVVVCPTRELADQAAAEANKLLKF--HPSIGVQLVIGGTR 195 Query 329 AR-DQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFI 384 +Q + N I+V TPGRL D + L V+ L+LDEAD LL G+ I Sbjct 196 MALEQKRMHTNPCQILVATPGRLKDHMENTPGFATRLMGVKVLILDEADRLLDMGFRTDI 255 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 R+ +P K+ Q ++ SAT+ +V+++ + +K + +TV Sbjct 256 ERIVAALP------KQRQTLLFSATVPD-EVRQVC--------HIAMKRDLEFVNTVEEG 300 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + ++ A + +S +L I E+ Sbjct 301 SEETHSQVKQM--------------------HVVAPLDKQFSILYGLLTDH-----ISEN 335 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + I+FC T + + + + + +H + R + + FK+ Sbjct 336 VDYKVIVFCTTAKVTSLVAELLSEL---------KLNVREIHSRKPQSYRTRISKEFKES 386 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 L+ +DV+ARG+D V V+ + +P +++ Y+HR+GR GR G I L+A +E Sbjct 387 KGLILVSSDVSARGVDYPNVTLVVQMGVPTDREQYIHRLGRTGRRGNEGSGILLLAPWEE 446 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 + + + E I + + + + H+ ++ Sbjct 447 YFLRSI--------KDLPITEATLPLIDLDTKRKVEKALAHVEVKDKEL 487 Score = 100 bits (249), Expect = 8e-21, Method: Composition-based stats. Identities = 25/101 (25%), Positives = 45/101 (45%), Gaps = 1/101 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F E + P + V+ + T +Q ++P+IL G DVL A+TG+GKT AF +P I Sbjct 79 TRFDECSLSPLTLKGVKAAGYERMTAVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPAI 138 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 ++V + + K+ ++ + + Sbjct 139 EVVSKLPPIDCDKKRPPISV-VVVCPTRELADQAAAEANKL 178 >sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia oleracea OX=3562 GN=RH7 PE=2 SV=1 Length=685 Score = 255 bits (650), Expect = 2e-73, Method: Composition-based stats. Identities = 104/417 (25%), Positives = 174/417 (42%), Gaps = 66/417 (16%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 IV+S +G + + P L++ P+RELA Q + F+ Y L + G Sbjct 165 IVESLVNGRTKDLRRSGHGRLPSVLVLLPTRELATQV---LADFQVYGGAVGLTACSVYG 221 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G Q+S L GVDIVVGTPGR+ DL+ G L L + F VLDEAD +L G+ D + Sbjct 222 GAPFHSQISSLTRGVDIVVGTPGRVKDLLEKGVLKLGSLLFRVLDEADEMLKMGFVDDVE 281 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW-VDLKGEDSVPDTV--H 442 + ++ V+ ++Q ++ SATL S+ VK++S + + VDL + + ++ Sbjct 282 LILGKVDHVS----KVQTLLFSATLPSW-VKQISTRFLKSAKKTVDLVSDQKMKASISVR 336 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 H+V+P + P++ + I+ Sbjct 337 HIVIPC----------------------------SASARPDLIPDIIRCYGS-------- 360 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 ++IIF TK L LHGD + +R+ L+ F+ Sbjct 361 ---GGRSIIFTETKESASQLAGLLT-------------GARPLHGDIQQTQREVTLKGFR 404 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G L+ T+VAARG+DI+ V +I P + ++Y+HR GR GRA G+A+ L + Sbjct 405 TGKFMTLVATNVAARGLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNTGVAVMLYDPK 464 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY--NEMQLLSEIEEHLNCTISQVEPDI 677 + V + G + + + +I + + ++ Sbjct 465 RSSV-TKIERESGVKFEHLSAPQPVDVAKAVGIEAAAAILQISDSVIPAFKDAAEEL 520 Score = 66.7 bits (161), Expect = 5e-10, Method: Composition-based stats. Identities = 22/130 (17%), Positives = 44/130 (34%), Gaps = 3/130 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + S + + + IQA + ++ G D++ A TG GKT AF +P+++ Sbjct 108 SLSNFRISKPLKDVLISKGIKALFPIQAMTFDNVIDGCDLVGRARTGQGKTLAFVLPIVE 167 Query 63 IVYETL-KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + KD + G+ + + C +H Sbjct 168 SLVNGRTKDLRRSGHGRLPSVLVLLPTRELATQVLADFQVYGGAVGLTACSVYGGAPFHS 227 Query 122 CRA--TKGLM 129 + T+G+ Sbjct 228 QISSLTRGVD 237 >sp|A1CB55|DBP7_ASPCL ATP-dependent RNA helicase dbp7 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp7 PE=3 SV=1 Length=755 Score = 256 bits (654), Expect = 2e-73, Method: Composition-based stats. Identities = 99/517 (19%), Positives = 179/517 (35%), Gaps = 97/517 (19%) Query 205 FSKN------------GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPK 252 F+KN G P + F L + + E K P Sbjct 103 FTKNPEPKNVEEVKEEGPVEEAKPTNAPLIDGLDTFTNLGLSPSLAAHLLTKLELKAPTA 162 Query 253 DGFVALSKA----PDGYIVKSQHSGNAQVTQTKFLPN---------------------AP 287 ++S+ D +I SG + Sbjct 163 IQKASISQLLKEDGDAFIQAETGSGKTLAYLLPLVQRIMTLSKPTTDATGQPIVHRDSGL 222 Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 A+++ P+REL +Q ++ + + +IGG + + + L G++I+V TP Sbjct 223 FAIVLAPTRELCKQISVVLESLLRC--AHWIVAGTVIGGEKKKSEKARLRKGLNILVATP 280 Query 348 GRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK------R 400 GRL D + +T L++S VR+LVLDE D L+ G+ + I + ++ + + Sbjct 281 GRLADHLENTKVLDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGIPTK 340 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 ++CSAT+ +V+KL E + + ED E+ Sbjct 341 RTTVLCSATM-KMNVQKLGEISLKDAVHIKADPEDE-------------------DEKAR 380 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 ++ D + + + + L +++ + + I+F D Sbjct 381 LANKEEDSAYRVPAQLKQSYAVVAAKLRLVTLTAYLKRTFMRKGSVMKTIVFVSCADSVD 440 Query 521 NLEQYFIQQGGGPD----------------------------KKGHQFSCVCLHGDRKPH 552 + F ++ D + + LHG + Sbjct 441 FHFEVFTRKKQQTDDADASDEEKTEEKPLSPHGTIAPATAFSNPSNPVTLYRLHGSLPQN 500 Query 553 ERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R L F K + LICTDVA+RG+D+ V V+ ++++HRIGR R R Sbjct 501 VRTSTLASFAKNREPSVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGRTARVGR 560 Query 612 MGLAISLVATEKEKVWYHVCSS--RGKGCYNTRLKED 646 G A+ + E+ + + R G TR+ + Sbjct 561 DGRALVFLMPGCEENYVEILKRGYRDGGKALTRVDAN 597 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 10/90 (11%) Query 3 AFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPV 60 F+ +G+ P +A + +++ PT IQ SI +L GD + AETGSGKT A+ +P+ Sbjct 137 TFTNLGLSPSLAAHLLTKLELKAPTAIQKASISQLLKEDGDAFIQAETGSGKTLAYLLPL 196 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK 90 +Q + K TT TG ++++ Sbjct 197 VQRIMTLSK--------PTTDATGQPIVHR 218 >sp|Q6C835|DBP7_YARLI ATP-dependent RNA helicase DBP7 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP7 PE=3 SV=1 Length=799 Score = 257 bits (656), Expect = 3e-73, Method: Composition-based stats. Identities = 98/463 (21%), Positives = 163/463 (35%), Gaps = 67/463 (14%) Query 222 MKNQALFPACVLKNAELKFNFG---EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 +K+ F + G + K + + D ++ SG Sbjct 229 LKDSTTFSGLGCSQRLVDALVGMQLAKPTKIQRATIPRLIQRERDLFVQAQTGSGKTLAF 288 Query 279 QTKFLPN-----------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 L A+I+ P+REL Q + ++ + P + ++IGG Sbjct 289 VLPVLERIMSCDDVSRETGLFAVILTPTRELTTQIYSVLETLCRK-ACPWIVPGIVIGGE 347 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + + + + GV+I+V TPGRL D +T L+LSQVR++VLDE D L+ G+ + I + Sbjct 348 KKKSEKARIRKGVNILVATPGRLADHFDNTEALDLSQVRWVVLDEGDRLMELGFEETITK 407 Query 387 MHNQI----------------PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 + I + R ++CSAT+ V +L + + WV Sbjct 408 ILRTIEWKSVLRGENYLKDIPKNLKPLPSRRVTVLCSATM-KGGVTELGKSTLKDADWV- 465 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 DSV D + V +L + + V R Sbjct 466 --SNDSVEDALAETSVETFSAPSQLVQEWVVVPAKLRLVTLLGALRGDILQS-------- 515 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK-----------KGHQ 539 E + I+F D + G +K Sbjct 516 -----------SEKTNTKVIVFLSCSDSVDFHFDVLSRDGSQINKMDTAKTAPLLLDDVS 564 Query 540 FSCVCLHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 S LHG R L F K L+CTDVA+RG+D+ + +VI P ++ Sbjct 565 TSVYKLHGSLSQQARTATLASFAKNSTPSILLCTDVASRGLDLPKITHVIEYDPPFSIED 624 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 ++HR+GR RA + G A+ + E+ + + T Sbjct 625 HLHRVGRTARAGQDGRALLFLLPGAEEGYVEKLKQSQQMKKTT 667 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 65/178 (37%), Gaps = 24/178 (13%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPV 60 FS +G + A+ M PT IQ +IP ++ D+ + A+TGSGKT AF +PV Sbjct 233 TTFSGLGCSQRLVDALVGMQLAKPTKIQRATIPRLIQRERDLFVQAQTGSGKTLAFVLPV 292 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA------IGSDGLCCQSR 114 ++ + +E + + Y I + + Sbjct 293 LERIMSCDDVSRE----TGLFAVILTPTRELTTQIYSVLETLCRKACPWIVPGIVIGGEK 348 Query 115 EVKEWHGCR-------ATKGLMKGKHYYEVSCHDQGLCRVGWSTMQAS---LDLGTDK 162 + E R AT G + H+ D L +V W + ++LG ++ Sbjct 349 KKSEKARIRKGVNILVATPGRLAD-HFDNTEALD--LSQVRWVVLDEGDRLMELGFEE 403 >sp|A5E3K3|DBP4_LODEL ATP-dependent RNA helicase DBP4 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP4 PE=3 SV=1 Length=775 Score = 256 bits (655), Expect = 3e-73, Method: Composition-based stats. Identities = 88/452 (19%), Positives = 162/452 (36%), Gaps = 71/452 (16%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ DL + +K + ++ + E+ + ++ G Sbjct 48 KHFSDLPITQNTLRGLKECSFVSLTDIQKKSIPVALKGED--------LMGTARTGSGKT 99 Query 267 VKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + + + + ALIV P+RELA Q + + KY L+ G Sbjct 100 LAFLIPVIEILLRNDITEYDGLAALIVSPTRELAVQIFEVLAKIGKYNS---FSAGLVTG 156 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEADGLLSQGYSDFI 384 G + + + ++I+VGTPGR+ ++ + S ++ LVLDEAD L G+ I Sbjct 157 GKDVQYEKERISR-MNILVGTPGRISQHLNESVGMETSNLQVLVLDEADRCLDMGFRKQI 215 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED---SVPDTV 441 + + N +P + Q ++ SAT H+ V+ L+ + P + + ++P+++ Sbjct 216 DNILNHLP------RTRQTLLFSAT-HTDSVQDLARLSLTNPKRIGTSSDQDISAIPESL 268 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 V V K + I Sbjct 269 DQYYVKVPLNE----------------------------------------KLDVLWSFI 288 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K H + ++F + + F G + L+G K R + +F Sbjct 289 KSHLKSKILVFFSSSKQVQYAYETFRTLQPG-------IPLMKLYGRHKQTSRLETTVKF 341 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + L TD+ ARG+D + +VI V P++ YVHR+GR R R G ++ ++ Sbjct 342 SQAQHACLFATDIVARGLDFPAIDWVIQVDCPEDVATYVHRVGRSARFGRQGKSLLMLLP 401 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 +E +KE +I Sbjct 402 TEEDGMLKRMKVHKIEPKMMNIKEKSKKSIRP 433 Score = 91.7 bits (226), Expect = 9e-18, Method: Composition-based stats. Identities = 33/120 (28%), Positives = 59/120 (49%), Gaps = 8/120 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + FS++ + + ++E ++ TDIQ +SIP+ L G D++ A TGSGKT AF IPV Sbjct 47 IKHFSDLPITQNTLRGLKECSFVSLTDIQKKSIPVALKGEDLMGTARTGSGKTLAFLIPV 106 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVK 117 I+I+ + +G S + + ++ + + S GL ++V+ Sbjct 107 IEILLRNDITEYDG-----LAALIVSPTRELAVQIFEVLAKIGKYNSFSAGLVTGGKDVQ 161 >sp|Q5K5B6|RH57_ORYSJ DEAD-box ATP-dependent RNA helicase 57 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0647900 PE=2 SV=2 Length=540 Score = 250 bits (639), Expect = 3e-73, Method: Composition-based stats. Identities = 95/437 (22%), Positives = 155/437 (35%), Gaps = 77/437 (18%) Query 241 NFGEEEFKFPPKDGFVALSKAPDG---YIVKSQHSGNAQVTQ----TKFLPN---APKAL 290 N + F+ P A+ G + SG K P KA+ Sbjct 160 NLSKLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAV 219 Query 291 IVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRL 350 I+ P+RELA QT K+ K K L+ ++ + DI++ TP RL Sbjct 220 ILCPTRELAAQTTRECKKLAK---GRKFYIKLMTKDLSKSGNFKDMH--CDILISTPLRL 274 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 D V L+LS+V +LVLDE+D L G+ + I+ + + + SATL Sbjct 275 DHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVIDSVVKACSNPSIIRS-----LFSATL 329 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 ++ L+ IMH V + ++S + ++ + +L Sbjct 330 PD-SIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFAGTEKGKLLA------------- 375 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 ++ E +IF ++K L + Sbjct 376 --------------------------LRQSFAESLNPPVLIFVQSKERAKELYKEL---- 405 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 +H D +R+ ++ + G LI T+V ARG+D GV VIN Sbjct 406 -----AFDDVRADVIHADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINY 460 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 P+ Y+HRIGR GRA R G AI+ E + ++ + + Sbjct 461 DFPESASAYIHRIGRSGRAGRSGEAITFFTEEDKPFLRNIANVL--------ISSGCEVP 512 Query 651 IWYNEMQLLSEIEEHLN 667 W + L + +N Sbjct 513 SWIKALPKLKRKKHRVN 529 Score = 92.9 bits (229), Expect = 2e-18, Method: Composition-based stats. Identities = 24/94 (26%), Positives = 43/94 (46%), Gaps = 4/94 (4%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + F E+ G + + ++ + PT IQ ++IP++L G + A TGSGKT AF Sbjct 141 LENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAF 200 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNK 90 P++ + K+ + T + A + Sbjct 201 LFPILMKIKPGSKEGVKAVILCPTRELAAQTTRE 234 >sp|A3GHW9|ROK1_PICST ATP-dependent RNA helicase ROK1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=ROK1 PE=3 SV=1 Length=558 Score = 250 bits (638), Expect = 6e-73, Method: Composition-based stats. Identities = 101/496 (20%), Positives = 189/496 (38%), Gaps = 69/496 (14%) Query 204 KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPD 263 F L ++ ++ ++ L + +A + Sbjct 117 SFQDMIGRFRLDSKLLSNLLEAEFVEPTAIQCESLPISLS--------GRDLIACAPTGS 168 Query 264 GYIVKSQ-HSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 G + + + +K P L++ P+ ELA Q ++ + KL Sbjct 169 GKTLAFLIPLIQSLLVSSKGRPKNYGITGLVISPTNELAIQIFQELQILTR---GKKLNV 225 Query 321 LLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG 379 ++ +A + +++ + DI+V TP RL D+V K++LS+V LV+DEAD L QG Sbjct 226 AILSKQLANKLNNDIVKASKYDIIVSTPLRLIDIVKNEKVDLSKVEQLVIDEADKLFDQG 285 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + + + + + +++ + SAT+ S V++++ IM P V + +++ + Sbjct 286 FVEQTDDILSHC-----TYTKIRKSMFSATIPSG-VEEMAHSIMRDPIRVIIGRKEAASN 339 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 T+ +V + +L Sbjct 340 TIDQKLVFTGSEEGKLLAIRQMIQ------------------------------------ 363 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + IIF ++ L + + + +H +R P +R++ ++ Sbjct 364 --EGEFKPPIIIFLQSIHRAKALFHELLYD---------KLNVDVIHAERTPKQREEVIK 412 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 RFK GD+ LI TDV ARG+D GV VIN +P Q YVHRIGR GR + G A++ Sbjct 413 RFKNGDIWVLITTDVLARGVDFKGVNMVINYDVPQTAQAYVHRIGRTGRGGKAGRAVTFF 472 Query 620 ATEKEKVWYHVCS-SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIK 678 E ++ + + + GC T + + +E IS V +K Sbjct 473 TKEDDQAVKPIINVMKQSGCEAGFSGWMENMTKMSKNEKKKVKHKEIDRKDISTVPKLVK 532 Query 679 VPVDEFDGKVTYGQKR 694 + + + +KR Sbjct 533 HKRKQREQMIEASKKR 548 Score = 95.2 bits (235), Expect = 4e-19, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 55/113 (49%), Gaps = 7/113 (6%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F +M + ++ + E +++ PT IQ ES+P+ L G D++ A TGSGKT AF Sbjct 115 IGSFQDMIGRFRLDSKLLSNLLEAEFVEPTAIQCESLPISLSGRDLIACAPTGSGKTLAF 174 Query 57 SIPVIQIVYETLK--DQQEGKKGKTTIKTGASVLNKWQ-MNPYDRGSAFAIGS 106 IP+IQ + + K + G G T + +Q + RG + Sbjct 175 LIPLIQSLLVSSKGRPKNYGITGLVISPTNELAIQIFQELQILTRGKKLNVAI 227 >sp|Q9SF41|RH45_ARATH DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana OX=3702 GN=RH45 PE=3 SV=1 Length=989 Score = 258 bits (660), Expect = 8e-73, Method: Composition-based stats. Identities = 105/500 (21%), Positives = 182/500 (36%), Gaps = 142/500 (28%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 GL +I +K ++ L + ++K G K+ Sbjct 399 HQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMS--------GRDCIGVAKTGSG---KT 447 Query 270 QHSGNAQVTQTKFLP-----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + K P + P L++ P+REL +Q ++I++F K + + + + Sbjct 448 LGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALG---IICVPVY 504 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLV---STGKLNLSQVRFLVLDEADGLLSQGYS 381 GG Q+S L+ G +IVV TPGR+ D++ S NL +V +LV+DEAD + G+ Sbjct 505 GGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFE 564 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I R+ I Q ++ SAT V+ L+ K+++ P + + G V + Sbjct 565 PQITRIVQNI------RPDRQTVLFSATFP-RQVETLARKVLNKPVEIQVGGRSVVNKDI 617 Query 442 HHVVV--PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 +V P + + RL E LG+ + Sbjct 618 TQLVEIRPESERFSRLLELLGEWY------------------------------------ 641 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + + ++F R++ ++ Sbjct 642 -----EKGKVLVFVRSQEK--------------------------------------SIS 658 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 FK LI T VAARG+D+ + V+N P+ ++YVHR+GR GRA R G A++ + Sbjct 659 DFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFI 718 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 + + K + + L + V D+K Sbjct 719 SEDDAKYAPDLVKA--------------------------------LELSEQPVPDDVKA 746 Query 680 PVDEFDGKVTYGQKRAAGGG 699 + F KV G ++A G G Sbjct 747 VAEGFMAKVKQGIEQAHGTG 766 Score = 108 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 4/108 (4%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + + G+ +I ++++++ P IQA+++P+I+ G D + A+TGSGKT F +P+++ Sbjct 398 WHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 457 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + KDQ + G I + + Y F+ +C Sbjct 458 I----KDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICV 501 >sp|Q4WV71|DBP7_ASPFU ATP-dependent RNA helicase dbp7 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp7 PE=3 SV=1 Length=758 Score = 255 bits (650), Expect = 9e-73, Method: Composition-based stats. Identities = 102/504 (20%), Positives = 172/504 (34%), Gaps = 99/504 (20%) Query 205 FSKN------------GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPK 252 F+KN G P + F L + E K P Sbjct 105 FTKNPEPQKAEEVKEEGHVENAKPTNAPLIDGLDTFTNLGLSPNLAAHLLTKLELKAPTA 164 Query 253 DGFVALSK----APDGYIVKSQHSGNAQVTQTKFLPN----------------------- 285 ++S+ D +I SG + Sbjct 165 IQKASISQLLKEEGDAFIQAETGSGKTLAYLLPLVQRIMALSKPGAQTDATGQPIVHRDS 224 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+++ P+REL +Q ++ + + +IGG + + + L G++I+V Sbjct 225 GLFAIVLAPTRELCKQISVVLENLLRC--AHWIVAGTVIGGEKKKSEKARLRKGLNILVA 282 Query 346 TPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK----- 399 TPGRL D + +T L++S VR+LVLDE D L+ G+ + I + ++ + Sbjct 283 TPGRLADHLDNTQALDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGIP 342 Query 400 -RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 R I+CSATL V+KL E + + ED R+ + Sbjct 343 ARRTTILCSATL-KMSVQKLGEISLKDAVHIKADPEDEDEKARR---SKAEESAYRVPAQ 398 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 L +S+ + L + +++ + +AIIF Sbjct 399 LKQSYAVVAA-----------------KLRLVTLTAFFKRTFMRKGSVMKAIIFVSCADS 441 Query 519 CDNLEQYFIQQGGGPD-----------------------------KKGHQFSCVCLHGDR 549 D + F ++ D + + LHG Sbjct 442 VDFHFEVFTRKQVKEDGGEPSDTDKSEEKPPSSPHGTIAPATAFSNPSNPVTLFRLHGSL 501 Query 550 KPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + R L F K + LICTDVA+RG+D+ V V+ ++++HRIGR R Sbjct 502 PQNVRTSTLGAFAKNKEASVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGRTAR 561 Query 609 AERMGLAISLVATEKEKVWYHVCS 632 R G A+ + E+ + V Sbjct 562 VGRDGRALIFLQPGCEENYVEVLK 585 Score = 74.0 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 8/90 (9%) Query 3 AFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPV 60 F+ +G+ P +A + +++ PT IQ SI +L D + AETGSGKT A+ +P+ Sbjct 139 TFTNLGLSPNLAAHLLTKLELKAPTAIQKASISQLLKEEGDAFIQAETGSGKTLAYLLPL 198 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK 90 +Q + K G T TG ++++ Sbjct 199 VQRIMALSKP------GAQTDATGQPIVHR 222 >sp|A5DLF4|DBP4_PICGU ATP-dependent RNA helicase DBP4 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP4 PE=3 SV=2 Length=754 Score = 254 bits (649), Expect = 1e-72, Method: Composition-based stats. Identities = 86/460 (19%), Positives = 170/460 (37%), Gaps = 74/460 (16%) Query 199 DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL 258 D+ + K+ L ++ + ++ + E+ + Sbjct 41 DEQSISQFKH---LPISEGTYKGLLENNFVSLTDIQKKAIPVALKSED--------VMGT 89 Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 ++ G + ++ + + ALIV P+RELA QT + + KY Sbjct 90 ARTGSGKTLAFLVPVIEKLIRENITEYDGLAALIVSPTRELAVQTFEVLTKIGKYNS--- 146 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEADGLL 376 L+ GG + + + ++I++GTPGR+ ++ + S ++ LVLDEAD L Sbjct 147 FSAGLVTGGKDVKYEKERISR-MNILIGTPGRISQHLNEAVGMETSNLQVLVLDEADRCL 205 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED- 435 G+ I+ + +P Q ++ SAT S +VK L+ + P V + + Sbjct 206 DMGFRKQIDNILGHLPVT------RQTLLFSAT-QSDNVKDLARLSLVNPKRVGVSSDQE 258 Query 436 --SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 S+P+++ + ++ + K Sbjct 259 VSSIPESLEQYYIKISLAS----------------------------------------K 278 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + +K H + ++F + + F + G S + L+G K Sbjct 279 MDVLWSFLKSHLKSKILVFFSSSKQVQFAYEAFRRLQPG-------ISLLKLYGRHKQTS 331 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + +F + L TD+ ARG+D + +V+ V P++ YVHR+GR R R G Sbjct 332 RLETTMKFSRAQHACLFATDIVARGLDFPAIDWVVQVDCPEDAATYVHRVGRAARFGRQG 391 Query 614 LAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 ++ ++A +E+ + +K+ I Sbjct 392 KSLLMLAPSEEEGMVKRLEAHKISLKMMNIKQKNKKVISP 431 Score = 87.5 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 58/120 (48%), Gaps = 8/120 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ F + + + + E +++ TDIQ ++IP+ L DV+ A TGSGKT AF +PV Sbjct 45 ISQFKHLPISEGTYKGLLENNFVSLTDIQKKAIPVALKSEDVMGTARTGSGKTLAFLVPV 104 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVK 117 I+ + +++ G + S + + ++ + + S GL ++VK Sbjct 105 IEKL---IRENITEYDGLAAL--IVSPTRELAVQTFEVLTKIGKYNSFSAGLVTGGKDVK 159 >sp|Q6CN92|SPB4_KLULA ATP-dependent rRNA helicase SPB4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=SPB4 PE=3 SV=1 Length=596 Score = 250 bits (639), Expect = 1e-72, Method: Composition-based stats. Identities = 89/388 (23%), Positives = 153/388 (39%), Gaps = 54/388 (14%) Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIG-- 325 + + KF + +LI+ P+RELA Q + I+ F KY + +R L++G Sbjct 67 ERLIKEEANSAKFKKSHFHSLIISPTRELASQIHDVIEDFLKYYPDNLYPIRSQLLVGTS 126 Query 326 GVAARDQLSVL-ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 + RD ++ +N I+VGTPGR+ D + + + +VLDEAD LL + + Sbjct 127 SASVRDDINSFTDNRPQILVGTPGRVLDFLQKTNVKTASCGTVVLDEADKLLDLNFQKDV 186 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + +P K+ + + SAT+ S ++ + M P V +K S P ++ Sbjct 187 ETILKMLP------KQRRTGLFSATIESAG-AQIFKTGMRNPVKVAVKSNSSAPSSLSIN 239 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 + + PK K + + + + Sbjct 240 YIVIPPKD----------------------------------------KLQLLLTLLNNY 259 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + + I++ T I FI + LHG + R + L+ F Sbjct 260 RFKKCIVYFPTCISVTYFYA-FINHLKELNLIQDDLKLFSLHGKLQTQSRMKTLDSFTSN 318 Query 565 DVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 L TDVAARGIDI V VI + P + ++HR GR GRA R+G A+ + + Sbjct 319 LTDAVLFTTDVAARGIDIPDVDLVIQLDPPTDADIFIHRCGRTGRANRIGKALVFLNEGR 378 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 E+ + + ++ G + Sbjct 379 EEDYVPFLEVKNVKLEEESVELKGVENL 406 Score = 94.4 bits (233), Expect = 9e-19, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 3/102 (3%) Query 3 AFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ ++ + P I A+E M + T +QA +IPL G DV++ + TGSGKT AF IP+ Sbjct 6 SWDDLKCEIQPWIRTAIESMGFETMTPVQASTIPLFSGNKDVVVESVTGSGKTIAFVIPI 65 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 ++ + + + + KK S + +D F Sbjct 66 LERLIKEEANSAKFKKSHF-HSLIISPTRELASQIHDVIEDF 106 >sp|Q6K7R9|RH48_ORYSJ DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0826100 PE=2 SV=1 Length=811 Score = 255 bits (651), Expect = 2e-72, Method: Composition-based stats. Identities = 103/512 (20%), Positives = 196/512 (38%), Gaps = 81/512 (16%) Query 164 GFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDK------------------GHVKF 205 K + +Y EE +D G + ++ + G F Sbjct 282 SAALRNCDMKKERRALKSYEEE--NNDLAGSFRELREEIKNREVLGAERRRYESRGESLF 339 Query 206 S-KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 + K ++ G++ + + V++ L ++ K G + Sbjct 340 TNKRFEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTG----TGKSAA 395 Query 265 YIVKSQHSG-NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 +++ + S NA + T + +LI+ P+RELA Q KY ++ + Sbjct 396 FLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGIGVQS--L 453 Query 324 IGGVAAR-DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQG 379 IGG + DQ + + I+V TPGRL D + + L ++ LVLDEAD LL G Sbjct 454 IGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADHLLDLG 513 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + I ++ + +P ++ Q ++ SAT+ +V+++S+ ++ K + D Sbjct 514 FRTDIEKIVDSLP------RQRQTLLFSATIPK-EVRRVSQLVL--------KRDHVFVD 558 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 TV V K ++L+ L H E + Sbjct 559 TVGLGAVETPTKVEQLY--LVMPH-----------------------ELHFHMVYRLLRE 593 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 I + + I+FC T + + + + + +H + R + E Sbjct 594 HIDQEVDYKVIVFCTTAMVTEFMYIMLRDL---------KLNVREIHSRKPQLYRTRISE 644 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 F+ L+ +DV+ RG++ GV VI V +P ++++Y+HR+GR GR + G I L+ Sbjct 645 EFRDSSRLILVTSDVSTRGVNYPGVTLVIQVGVPSDREHYIHRLGRTGREGKSGKGILLL 704 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 A +E + + + E+ + Sbjct 705 APWEEYFLNEIHDLPVQKSQTPNIDEEMKRKV 736 Score = 92.5 bits (228), Expect = 6e-18, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 1/111 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E G+ P +A+ + ++ T +Q ++P+ L G DVL+ A+TG+GK+ AF +P I+ Sbjct 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIES 403 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 V +K + + + + G+ QS Sbjct 404 VLNAMKSHTNHRVSP-IFSLILCPTRELAIQLTAEANVLLKYHQGIGVQSL 453 >sp|Q9VHU1|DDX55_DROME Probable ATP-dependent RNA helicase DDX55 homolog OS=Drosophila melanogaster OX=7227 GN=CG9630 PE=2 SV=1 Length=613 Score = 250 bits (639), Expect = 2e-72, Method: Composition-based stats. Identities = 87/419 (21%), Positives = 164/419 (39%), Gaps = 62/419 (15%) Query 264 GYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 ++V + +T + P AL++ P+RELA Q + QF ++ D L + LI Sbjct 60 AFLVPMLEILQRRHKETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLI 119 Query 324 IGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNL------SQVRFLVLDEADGLL 376 +GG + + ++ L I+V TPGRL+DL +L + FLVLDEAD LL Sbjct 120 VGGNSIEEDIATLRRETPCILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLL 179 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 G+ +N + +P ++ + + SAT + +V L + P V +K + S Sbjct 180 DLGFKTSVNNILGYLP------RQRRTGLFSAT-QTTEVTDLIRAGLRNPVLVSVKEKAS 232 Query 437 --VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 P + + V P+ + ++ L Sbjct 233 VNTPARLQNFYRIVEPELK-------------------------------FVALLEFLSS 261 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 V + + ++F T + + + + + +HG K ++R Sbjct 262 PATV-------IGKVMVFFPTCACVEYWAEAL-------PPLLPKRTVLGIHGKMK-NKR 306 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 +E+F+ L+CTDV ARG+D+ + +V+ P ++VHR+GR R G Sbjct 307 ANVVEKFRNTPQAVLLCTDVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGN 366 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 A+ + ++ + + ++ +E ++ + + L V Sbjct 367 ALVFLLPSEDAYVHFLKINQKVELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKGV 425 Score = 88.6 bits (218), Expect = 7e-17, Method: Composition-based stats. Identities = 26/101 (26%), Positives = 45/101 (45%), Gaps = 2/101 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++ + + + Q V+ + T +Q +IPL+L DV A TGSGKT AF +P++ Sbjct 7 SSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPML 66 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +I+ K+ G K S + + + F Sbjct 67 EILQRRHKETPWGPK--EIGALVISPTRELARQISEVLAQF 105 >sp|Q3EBD3|RH41_ARATH DEAD-box ATP-dependent RNA helicase 41 OS=Arabidopsis thaliana OX=3702 GN=RH41 PE=2 SV=1 Length=505 Score = 247 bits (631), Expect = 2e-72, Method: Composition-based stats. Identities = 90/428 (21%), Positives = 168/428 (39%), Gaps = 75/428 (18%) Query 227 LFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-- 284 F +C L +L N + FP A+ A G + + + T + +P Sbjct 111 TFTSCGL-PPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPII 169 Query 285 ---------------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 P A+++ P+REL Q + K K + + L++GG Sbjct 170 SRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLP---FKTALVVGGDPM 226 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 QL ++ GV++++GTPGR+ DL+S + L + VLDE D +L +G+ D + ++ Sbjct 227 SGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQ 286 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + Q QV++ SAT+ S +V+K+ + V + + V+ + + V+ Sbjct 287 ALSQ-------PQVLLFSATI-SREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVD 338 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 K + + + + + H A Sbjct 339 AKQKK--------------------------------------QKLFDILRSQNHFKPPA 360 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +++ +++ D L G + +HG++ ER+ + F G+V L Sbjct 361 VVYVSSRVGADLLANAITVVTG--------VKALSIHGEKPMKERRDVMGSFLGGEVPVL 412 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + T V RG+D+ V VI +P + Y+H IGR R G AI V + ++ Sbjct 413 VSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPD 472 Query 630 VCSSRGKG 637 + ++ Sbjct 473 LVAALKSS 480 Score = 100 bits (249), Expect = 7e-21, Method: Composition-based stats. Identities = 26/105 (25%), Positives = 49/105 (47%), Gaps = 1/105 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+ G+ P++ +E + PT IQ ++IP L G +L +A+TGSGKT +F +P+ Sbjct 109 VLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPI 168 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 I T + + + + + + + D+ G Sbjct 169 ISRC-TTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKG 212 >sp|Q2NL08|DDX55_BOVIN ATP-dependent RNA helicase DDX55 OS=Bos taurus OX=9913 GN=DDX55 PE=2 SV=1 Length=601 Score = 250 bits (637), Expect = 2e-72, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 151/375 (40%), Gaps = 57/375 (15%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + KF + A+I+ P+RELA Q + F K P+ ++L IGG + ++ + Sbjct 75 EEKFKKSQVGAIIITPTRELAVQIEEVLSHFTK--PFPQFSQILWIGGRNPGEDVARFKE 132 Query 339 -GVDIVVGTPGRLDDLVSTGKLNL------SQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 G +I+V TPGRL+D+ L + LVLDEAD LL G+ IN + + Sbjct 133 LGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLEVLVLDEADRLLDMGFETSINTILEFL 192 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P K+ + + SAT + +V+ L + P + +K + + Sbjct 193 P------KQRRTGLFSAT-QTQEVENLVRAGLRNPVRISVKEKGVAASSTQ--------- 236 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + RL ++ K V ++ HK ++ ++ Sbjct 237 --KTPSRLENHYMVCKADE----------------------KFNQLVHFLRNHKQEKHLV 272 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T + + + +C+HG K ++R + F+K L+C Sbjct 273 FFSTCACVEYYGKAL-------ETLVKGVKIMCIHGKMK-YKRNKIFMEFRKLQSGILVC 324 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 TDV ARGIDI V +V+ P +VHR GR R G A+ + +E + Sbjct 325 TDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEESYISFLA 384 Query 632 SSRGKGCYNTRLKED 646 ++ +L+++ Sbjct 385 INQKCPLQEMKLQKN 399 Score = 94.4 bits (233), Expect = 9e-19, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 6/104 (6%) Query 3 AFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ + + P++ + E+ + T +Q+ +IPL + DV A TGSGKT AF IP+ Sbjct 8 SWESLPVPLHPKVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPI 67 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 +I+ + ++ + G I + + + + S F Sbjct 68 EEILLRREEKFKKSQVGAIII----TPTRELAVQIEEVLSHFTK 107 >sp|Q8SR01|DBP4_ENCCU ATP-dependent RNA helicase DBP4 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=DBP4 PE=3 SV=2 Length=449 Score = 245 bits (626), Expect = 3e-72, Method: Composition-based stats. Identities = 90/495 (18%), Positives = 177/495 (36%), Gaps = 73/495 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 +DL + I ++ ++ + + S+ G + Sbjct 3 FEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMAL--------EGHDIIGSSQTGTGKTLA 54 Query 269 SQHSGNAQV-TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 ++ + + L++ P+RELA Q + + + KY L LI+GG+ Sbjct 55 FLVPTLQRLVSLGWGGGDGLGCLVITPTRELALQIFDVLSRIAKYTV---LSTGLIMGGL 111 Query 328 AARDQLSVLENGVDIVVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFINR 386 A D+L + N ++I+V TPGRL + L+ + V+ L+LDEAD ++ G+ + + Sbjct 112 EAEDELLKV-NQMNILVCTPGRLLQHLQENPYLSTANVQILILDEADKMIEMGFKEVLED 170 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + IPQ + Q ++ SAT + + L + P + + E+ P + Sbjct 171 ILEYIPQ------KKQTLLFSATPKASTARILK---LEDPRIISIYKEEGFPSQLRQYFY 221 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + K Y I + Sbjct 222 MMRTGD----------------------------------------KINYLHTFIGSNPE 241 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + I+F T + F + CL G +R +RF K Sbjct 242 VKGIVFFSTCKEVKFHCLLFERLKLRN-------RIFCLSGGMSQKQRIDVFKRFVKEKN 294 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 L CTD+ +RG+D V VI P + YVHR+GR R G + + +EK+ Sbjct 295 GILFCTDLGSRGLDFPKVDVVIQYDCPCNVETYVHRVGRTARNSERGESYVYLVHGEEKL 354 Query 627 WYHVCSS---RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + + + + + +++ ++ + + L + ++ + + Sbjct 355 LTDIQKKGWIKKQEGMEDKGISEEITEGPGVQIRCINNMVKRLVRSSKELNEYCRKYLVT 414 Query 684 FDGKVTYGQKRAAGG 698 ++ +T+ KR + G Sbjct 415 YEKFLTFSSKRYSEG 429 Score = 88.3 bits (217), Expect = 4e-17, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 53/118 (45%), Gaps = 8/118 (7%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F ++ + I + + E ++ ++Q + IP+ L G D++ +++TG+GKT AF +P +Q Sbjct 3 FEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQR 62 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD---RGSAFAIGSDGLCCQSREVKE 118 + + + + +D R + + + S GL E ++ Sbjct 63 LVSLGWGGG-----DGLGCLVITPTRELALQIFDVLSRIAKYTVLSTGLIMGGLEAED 115 >sp|Q9VVK8|DDX52_DROME Probable ATP-dependent RNA helicase DDX52 OS=Drosophila melanogaster OX=7227 GN=ais PE=1 SV=1 Length=594 Score = 249 bits (636), Expect = 3e-72, Method: Composition-based stats. Identities = 101/527 (19%), Positives = 193/527 (37%), Gaps = 75/527 (14%) Query 204 KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPD 263 F +D + + ++ ++ ++ L + +A + Sbjct 116 SFGTLTRDFKMLPRLQQNLLSRNFDHPTPIQMQALPVLL--------QRRALMACAPTGS 167 Query 264 GYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 G + + K +AL++ P+RELA+Q + + LR Sbjct 168 GKTLAFLTPIINGLRAHKT--TGLRALVLAPTRELAQQIYRECAELTR---ETGLRTH-F 221 Query 324 IGGVAARDQL--SVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQG 379 I V+ Q + + DI+V TP R+ L+ L+LS V + VLDEAD L+ +G Sbjct 222 ISKVSEAKQKHGAECKQRYDILVSTPNRVRFLLQQEPPLLDLSHVEWFVLDEADRLMEEG 281 Query 380 ---YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 + + ++ ++ V SAT + V K + + + + + ++S Sbjct 282 QNNFKEQLDDIY-----AACSNPTKCVAFFSATY-TVPVAKWALRHLKNLVRITIGVQNS 335 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 +TV ++ V + +L V +D R G P Sbjct 336 ATETVQQELLFVGSEGGKL-------------VAIRDLVRQGLQPP-------------- 368 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 ++F ++K L + + G + +H +R H+R Sbjct 369 ------------VLVFVQSKERAKQLFEELLYDG---------INVDVIHAERSQHQRDN 407 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 ++ F++G + LICT++ RGID GV VIN P +Y+HRIGR GRA R G AI Sbjct 408 CVKAFREGSIWVLICTELMGRGIDFKGVNLVINYDFPPTTISYIHRIGRTGRAGRPGRAI 467 Query 617 SLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD 676 + E + + +E ++ ++ +++ P+ Sbjct 468 TFFTQEDTSNLRGIALIIKNSGGTVPEYMLQMKKVRKSEAKMRAKKPLDREDISTKIRPE 527 Query 677 IKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQ 723 K K+ ++ + KG+ L ++L ++ E + Sbjct 528 TKGDEKHKSTKLKKVERTEKILKNRKGYEKDLNSKQKKLGNIKTELK 574 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 18/144 (13%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 + ++P + Q + ++ PT IQ +++P++L ++ A TGSGKT AF P+I + Sbjct 123 DFKMLPRLQQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGLR 182 Query 66 ETLKDQQEGKKGKTTIKTGASVLNKWQMNPY---DRGSAFAIGSDGLCCQSREVKEWHGC 122 K + + Y + + E K+ HG Sbjct 183 AH--------KTTGLRALVLAPTRELAQQIYRECAELTRETGLRTHFISKVSEAKQKHGA 234 Query 123 RATKGLMKGKHYYEVSCHDQGLCR 146 K Y++ R Sbjct 235 EC-------KQRYDILVSTPNRVR 251 >sp|A6RSH5|DBP7_BOTFB ATP-dependent RNA helicase dbp7 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp7 PE=3 SV=1 Length=877 Score = 255 bits (652), Expect = 3e-72, Method: Composition-based stats. Identities = 113/573 (20%), Positives = 201/573 (35%), Gaps = 64/573 (11%) Query 187 TMHDTIGCYLDID-KGHVKFSKNGKD-LGLAFEIPPHMKNQALFPACVLKNAELKFNFGE 244 + + F + + P + A F L + Sbjct 214 KPGQVVSSLFTFNPTSKKTFDEPEEQAEPAKPSNAPLTEEMATFTNLGLSRRLAAHLSTK 273 Query 245 EEFKFPPKDGFVALSK----APDGYIVKSQHSGNAQVTQTKFL---------------PN 285 + K P ++ + D +I SG + + Sbjct 274 LDMKAPTAIQKASVQQLVSDDSDAFIQAETGSGKTLAYLLPIVERILALSENGVQIHRDS 333 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+I+ P+REL +Q +++ + P + + GG + + + + L GV+I+V Sbjct 334 GLFAIILSPTRELCKQIAAVLEKVLRC--APWIVGTTVNGGESKQSEKARLRKGVNILVA 391 Query 346 TPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI---------PQVT 395 TPGRL D + +T LN++ VR+LVLDE D L+ G+ + I + +I + Sbjct 392 TPGRLADHLDNTEVLNVATVRWLVLDEGDRLMELGFEEEIKGIVEKIGRRSVAKANSDMG 451 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED-----------------SVP 438 S KR I+CSAT+ +V++L E + + + S P Sbjct 452 SLPKRRVTILCSATM-KMNVQRLGEISLKDAVHIQADPSEQEKQDKENGVEAQDKAFSAP 510 Query 439 DTVHHVV--VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 + VP + L L ++ R V A+S + Sbjct 511 TQLKQSYAIVPAKLRLVTLTALLKRAFARKGSVMKAIVFISCADSVDFHFSLFSRTPEAS 570 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 A +E A+ L + I G + LHG + R Sbjct 571 AEVVDEEKVDLPAL-------PKSELVKETIAHGTTISNNSNPVILHKLHGSLAQNIRTA 623 Query 557 NLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 L+ F + D +ICTDVA+RG+D+ V +VI P ++++HR+GR RA R G A Sbjct 624 TLKAFSESADPCVMICTDVASRGLDLPNVDFVIEYDPPFSAEDHLHRVGRTARAGREGRA 683 Query 616 ISLVATEKEKVWYHVCSS---RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 + + E+ + + +S GK ED + + E + + + Sbjct 684 LIFLMPGVEEEYVSILASGYREGKKALTRHTAEDLIQKGFGGIGREWEERATNFQLEVER 743 Query 673 VEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHV 705 D ++ + A + + H+ Sbjct 744 WSLDSPKYLEMARRGYQSHIRAYATHVANERHI 776 Score = 72.5 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 30/133 (23%), Positives = 56/133 (42%), Gaps = 5/133 (4%) Query 1 MAAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSI 58 MA F+ +G+ +A + ++D PT IQ S+ ++ D + AETGSGKT A+ + Sbjct 254 MATFTNLGLSRRLAAHLSTKLDMKAPTAIQKASVQQLVSDDSDAFIQAETGSGKTLAYLL 313 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP---YDRGSAFAIGSDGLCCQSRE 115 P+++ + ++ + + S + ++ A G E Sbjct 314 PIVERILALSENGVQIHRDSGLFAIILSPTRELCKQIAAVLEKVLRCAPWIVGTTVNGGE 373 Query 116 VKEWHGCRATKGL 128 K+ R KG+ Sbjct 374 SKQSEKARLRKGV 386 >sp|A4REU9|MAK5_PYRO7 ATP-dependent RNA helicase MAK5 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=MAK5 PE=3 SV=2 Length=760 Score = 253 bits (646), Expect = 3e-72, Method: Composition-based stats. Identities = 113/489 (23%), Positives = 188/489 (38%), Gaps = 51/489 (10%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 LGL+ EI + ++ A + + G + A IV+ Sbjct 192 LGLSEEIMSSIAKLKFAKPTAIQAATIPEILAGHDVVGKASTGS-GKTLAFGIPIVEKWL 250 Query 272 SGNAQVTQTKFLPNA---PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 S NA + P AL++ P+RELA Q ++IK + + GG++ Sbjct 251 SINASTQSKRVAEGETKTPIALVLSPTRELAHQLTDHIKNLCAGLATSPY-VCSVTGGLS 309 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFIN 385 Q LE DIVVGTPGRL +++S+ ++FLV+DEAD LLS+G+ Sbjct 310 VHKQQRQLEK-ADIVVGTPGRLWEVLSSSTKLIQAFRGIKFLVVDEADRLLSEGHFKDAK 368 Query 386 RMHNQIPQVTSD-------GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 + + +V +D GK Q +V SAT + +KL+ K Sbjct 369 DIFEGLDKVETDDDGIIRGGKARQTLVFSATFNKGLQQKLAGKGRFD------------- 415 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 + + + L ++L + ++ E E + K Y Sbjct 416 ------LATDSQSMEYLLKKLKFREEIPKFIDVNPVSQMAEGLKEGIVECGAMEKDLYLY 469 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + H + ++F + L Q + LH R +++ Sbjct 470 SLLLMHPTQRTLVFTNSISSVRRLTPMLQQL---------TLPVIALHSQMIQKARLRSV 520 Query 559 ERF---KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 ERF K G LI TDVAARG+DI G+ VI+ +P YVHR GR RA+ GL+ Sbjct 521 ERFTSSKPGSASILIATDVAARGLDIRGIDVVIHYHVPRTADAYVHRSGRTARADSSGLS 580 Query 616 ISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN----EMQLLSEIEEHLNCTIS 671 I + A E+ + + K+ ++ + + +L+S++ E + Sbjct 581 ILICAPEEVTPTRRLVAKVHASAAAKGKKKGSAGGVFVHSVELDRRLVSKLRERVQLAKQ 640 Query 672 QVEPDIKVP 680 + + Sbjct 641 IADSTLAKE 649 Score = 109 bits (272), Expect = 2e-23, Method: Composition-based stats. Identities = 42/162 (26%), Positives = 67/162 (41%), Gaps = 21/162 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ + +G+ EI ++ ++ + PT IQA +IP IL G DV+ A TGSGKT AF IP+ Sbjct 186 VSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPEILAGHDVVGKASTGSGKTLAFGIPI 245 Query 61 IQIVYETLKDQQEGK----KGKTTIKTGASVLNKWQMNPYDRGSAFAIG----------S 106 ++ Q + + KT I S + D G + Sbjct 246 VEKWLSINASTQSKRVAEGETKTPIALVLSPTRELAHQLTDHIKNLCAGLATSPYVCSVT 305 Query 107 DGLCC--QSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCR 146 GL Q R++++ T G +EV L + Sbjct 306 GGLSVHKQQRQLEKADIVVGTPGR-----LWEVLSSSTKLIQ 342 >sp|Q8NHQ9|DDX55_HUMAN ATP-dependent RNA helicase DDX55 OS=Homo sapiens OX=9606 GN=DDX55 PE=1 SV=3 Length=600 Score = 249 bits (636), Expect = 3e-72, Method: Composition-based stats. Identities = 86/353 (24%), Positives = 142/353 (40%), Gaps = 57/353 (16%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + K + A+I+ P+RELA Q + F K+ P+ ++L IGG + + + Sbjct 75 EEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHF--PEFSQILWIGGRNPGEDVERFKQ 132 Query 339 -GVDIVVGTPGRLDDLVSTGKLNL------SQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 G +I+V TPGRL+D+ L + LVLDEAD LL G+ IN + + Sbjct 133 QGGNIIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFL 192 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P K+ + + SAT + +V+ L + P V +K + + Sbjct 193 P------KQRRTGLFSAT-QTQEVENLVRAGLRNPVRVSVKEKGVAASSAQ--------- 236 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + RL ++ K V ++ HK ++ ++ Sbjct 237 --KTPSRLENYYMVCKADE----------------------KFNQLVHFLRNHKQEKHLV 272 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T + + + +C+HG K ++R + F+K L+C Sbjct 273 FFSTCACVEYYGKAL-------EVLVKGVKIMCIHGKMK-YKRNKIFMEFRKLQSGILVC 324 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 TDV ARGIDI V +V+ P +VHR GR R G A+ + +E Sbjct 325 TDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEE 377 Score = 97.1 bits (240), Expect = 1e-19, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 6/104 (6%) Query 3 AFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ + + P++ A+ E+ + T +Q+ +IPL + DV A TGSGKT AF IP+ Sbjct 8 SWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPI 67 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 ++I+ + ++ + G I + + + + S F Sbjct 68 LEILLRREEKLKKSQVGAIII----TPTRELAIQIDEVLSHFTK 107 >sp|A1DE84|DBP7_NEOFI ATP-dependent RNA helicase dbp7 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp7 PE=3 SV=1 Length=758 Score = 253 bits (646), Expect = 4e-72, Method: Composition-based stats. Identities = 102/504 (20%), Positives = 172/504 (34%), Gaps = 99/504 (20%) Query 205 FSKN------------GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPK 252 F+KN G P + F L + + E K P Sbjct 105 FTKNPEPQKVEEVKEEGHVEDAKPTNAPLIDGLDTFTNLGLSPSLAAHLLTKLELKAPTA 164 Query 253 DGFVALSK----APDGYIVKSQHSGNAQVTQTKFLPN----------------------- 285 ++S+ D +I SG + Sbjct 165 IQKASISQLLKEEGDAFIQAETGSGKTLAYLLPLVQRIMALSKPGAQTDAKGQPIVHRDS 224 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 A+++ P+REL +Q ++ + + +IGG + + + L G++I+V Sbjct 225 GLFAIVLAPTRELCKQISVVLENLLRC--AHWIVAGTVIGGEKKKSEKARLRKGLNILVA 282 Query 346 TPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK----- 399 TPGRL D + +T L++S VR+LVLDE D L+ G+ + I + ++ + Sbjct 283 TPGRLADHLDNTQALDVSNVRWLVLDEGDRLMELGFEEEIQGIVKKLDARQRPSRIPGVP 342 Query 400 -RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 R I+CSATL V+KL E + + ED + K R E Sbjct 343 TRRTTILCSATL-KMSVQKLGEISLKDAVHIKADPEDE------------DEKARRSKEE 389 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 + + + L + +++ + +AIIF Sbjct 390 ESAYRVPAQLKQSYAVVAAKL--------RLVTLTAFFKRTFMRKGSVMKAIIFVSCADS 441 Query 519 CDNLEQYFIQQGGGPD-----------------------------KKGHQFSCVCLHGDR 549 D + F ++ D + + LHG Sbjct 442 VDFHFEVFTRKQAKEDGDESSDTDKSEDKPPSSPHGTIAPATAFSNPSNPVTLFRLHGSL 501 Query 550 KPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + R L F K + LICTDVA+RG+D+ V V+ ++++HRIGR R Sbjct 502 PQNVRTSTLGAFAKNKEASVLICTDVASRGLDLPNVDLVVEYDPAFSAEDHLHRIGRTAR 561 Query 609 AERMGLAISLVATEKEKVWYHVCS 632 R G A+ + E+ + V Sbjct 562 VGRDGRALIFLQPGCEENYVEVLK 585 Score = 73.2 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 27/82 (33%), Positives = 44/82 (54%), Gaps = 3/82 (4%) Query 3 AFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPV 60 F+ +G+ P +A + +++ PT IQ SI +L D + AETGSGKT A+ +P+ Sbjct 139 TFTNLGLSPSLAAHLLTKLELKAPTAIQKASISQLLKEEGDAFIQAETGSGKTLAYLLPL 198 Query 61 IQIVYETLKD-QQEGKKGKTTI 81 +Q + K Q KG+ + Sbjct 199 VQRIMALSKPGAQTDAKGQPIV 220 >sp|Q0CF43|DBP7_ASPTN ATP-dependent RNA helicase dbp7 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp7 PE=3 SV=2 Length=769 Score = 253 bits (646), Expect = 4e-72, Method: Composition-based stats. Identities = 100/427 (23%), Positives = 163/427 (38%), Gaps = 39/427 (9%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 + P +ALS + S Q + A+++ P+REL +Q + Sbjct 198 YLLPLVQRIMALSHPTNRTDATSTTDAEGQPV--VHRDSGLFAIVLAPTRELCKQISVVL 255 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVR 365 + + + +IGG + + + L G++I+V TPGRL D + +T L++S VR Sbjct 256 EGLLRC--AHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTQALDVSNVR 313 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK------RLQVIVCSATLHSFDVKKLS 419 +LVLDE D L+ G+ + + ++ + + I+CSATL +V+KL Sbjct 314 WLVLDEGDRLMELGFEQELQGIIKKLDARQRPSRIPGVPTKRTTILCSATL-KMNVQKLG 372 Query 420 EKIMHFPTWVDLKGED---------------SVPDTVHHVVVPVNPKTD--RLWERLGKS 462 E + + D +VP + V K L L ++ Sbjct 373 EMSLKDAIHIKADPADEDGDAKPKNDDESAFTVPAQLKQSYAIVAAKLRLVTLTAFLKRT 432 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 +R V A+S + E + A D TK Sbjct 433 FMRKGSVMKAIVFVSCADSVDFHFEVFTRKLQDSDENAEDSDASD-------TKEKPAAF 485 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGIDI 581 I + + + LHG H R L F + D L+CTDVA+RG+D+ Sbjct 486 THNTIARATAFSNPSNPVTLHRLHGSLPQHVRTSTLASFARNKDASVLVCTDVASRGLDL 545 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS--RGKGCY 639 V VI ++++HRIGR R R G A+ + E+ + + R G Sbjct 546 PNVDLVIEYDPAFSAEDHLHRIGRTARLGRDGRALIFLQPGCEEGYVEILKRGYRDGGKA 605 Query 640 NTRLKED 646 TR D Sbjct 606 LTRTNAD 612 Score = 73.2 bits (178), Expect = 5e-12, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 2/90 (2%) Query 3 AFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPV 60 F+ +G+ P +A + +++ PT IQ SI +L D + AETGSGKT A+ +P+ Sbjct 143 TFTNLGLSPTLAAHLLTKLELKAPTAIQKASISQLLKEESDAFIQAETGSGKTLAYLLPL 202 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK 90 +Q + TT G V+++ Sbjct 203 VQRIMALSHPTNRTDATSTTDAEGQPVVHR 232 >sp|Q9DGP9|DDX25_XENLA ATP-dependent RNA helicase DDX25 OS=Xenopus laevis OX=8355 GN=deadsouth PE=2 SV=1 Length=483 Score = 246 bits (627), Expect = 4e-72, Method: Composition-based stats. Identities = 103/436 (24%), Positives = 174/436 (40%), Gaps = 83/436 (19%) Query 228 FPACVLKNAELKFNFG---EEEFKFPPKDGFVALSKAPDGYIVKSQHSGN-------AQV 277 F LKN L+ + K + L+ P I +SQ A + Sbjct 99 FEELHLKNELLRGIYAMGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAML 158 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 ++ P+ + + P+ ELA QT +++ K+ ++ + G + S LE Sbjct 159 SRVDANKKYPQCICLSPTFELALQTGKVVEEMGKFCAGIEV-IYALRGNRPGKG--SRLE 215 Query 338 NGVDIVVGTPGRLDDL-VSTGKLNLSQVRFLVLDEADGLLS-QGYSDFINRMHNQIPQVT 395 IV+GTPG + D + + + VLDEAD +++ QG+SD R+ +P Sbjct 216 --AQIVIGTPGTVLDWCFKLRLITVENISVFVLDEADVMINVQGHSDHSVRVKRSMP--- 270 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K Q+++ SAT V +E+I+ P + LK E+ + K + Sbjct 271 ---KSCQMLLFSATFED-SVWAFAERIVPDPNIIKLKKEELTLKNIQQFYDQCENKEQK- 325 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 L Y V I QAI+FC+T Sbjct 326 ---------------------------------YSALCNLYGVITIA-----QAIVFCQT 347 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + L Q G L G+ ++R ++RF++G + L+ T+V Sbjct 348 RKIASWLSQKLSDDG---------HQVALLSGELPVYDRADMIQRFREGREKVLVTTNVC 398 Query 576 ARGIDIHGVPYVINVTLP------DEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 ARGID+ V V+N LP + + Y+HRIGR GR + G+A+SL+ E + + Sbjct 399 ARGIDVEQVSIVVNFDLPVNVDGSVDFETYLHRIGRTGRFGKKGIAVSLI----ENFFVY 454 Query 630 VCSSRGKGCYNTRLKE 645 + + +NT++ + Sbjct 455 MLKEI-EDHFNTKITK 469 Score = 82.1 bits (201), Expect = 5e-15, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 55/143 (38%), Gaps = 3/143 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSI 58 + +F E+ + E+ + + M + P+ IQ ++P++L +++ +++G+GKT AF + Sbjct 96 VKSFEELHLKNELLRGIYAMGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVL 155 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 ++ V K Q T + +M + G G E Sbjct 156 AMLSRVDANKKYPQCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNRPGKGSRLE 215 Query 119 WHGCRATKGLMKGKHYYEVSCHD 141 T G + +++ Sbjct 216 AQIVIGTPGTVLD-WCFKLRLIT 237 >sp|Q0U6X2|MAK5_PHANO ATP-dependent RNA helicase MAK5 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=MAK5 PE=3 SV=1 Length=817 Score = 254 bits (648), Expect = 4e-72, Method: Composition-based stats. Identities = 107/475 (23%), Positives = 179/475 (38%), Gaps = 58/475 (12%) Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP---------------- 284 + + +F P + + G V + S + T +P Sbjct 263 SLAKLKFSKPTTIQASTIPEIMAGRDVIGKASTGSGKTLAFGIPIIESYLASKSKSKDVK 322 Query 285 -NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIV 343 P ALI+ P+RELA Q ++ + GG+A + Q LE DI+ Sbjct 323 DKTPLALIIAPTRELAHQITAHLTALCAKGAFEAPLIASVTGGLAVQKQRRQLEK-ADII 381 Query 344 VGTPGRLDDLVSTGKLNL---SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ------- 393 VGTPGRL +++STG L Q+RFLV+DEAD LLSQG + + + + Sbjct 382 VGTPGRLWEVISTGHGLLEKVKQIRFLVVDEADRLLSQGNYKELGEILKILEKDAPAEGE 441 Query 394 ---VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 + Q +V SAT +KL+ K G D++ + Sbjct 442 AEAEETTEVERQTLVFSATFQKGLQQKLAGK--------AKGGSDNL--------MSKQQ 485 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 + L +++ + + A +++ + E E K Y + + +A+ Sbjct 486 SMEYLLKKINFREEKPKFIDANPSSQMASKLKEGLIECAGTEKDLYLYSLLMFYPKKRAL 545 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IF + L + + LH R +++ERFK+ L+ Sbjct 546 IFTNSISAVRRLTPFLQNLA---------LPALPLHSSMAQKARLRSIERFKERPGSILV 596 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 TDVAARG+DI V VI+ LP YVHR GR RAE G +I + A E+ + Sbjct 597 ATDVAARGLDIPKVELVIHYHLPRAADTYVHRSGRTARAEASGSSILICAPEEVGGVRRL 656 Query 631 CSSRGKGCYNTRLKEDGGCTIWY--NEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + + I + ++++ ++ + + + I Sbjct 657 IAKVHARADEAPKSKKTAYFIRTLDIDRRIVARLKPRASISKKLADTVIAKEKKH 711 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 70/157 (45%), Gaps = 19/157 (12%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +A+ E+ + +I +++ ++ + PT IQA +IP I+ G DV+ A TGSGKT AF IP+I Sbjct 249 SAWEELELSTKILESLAKLKFSKPTTIQASTIPEIMAGRDVIGKASTGSGKTLAFGIPII 308 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF-----------AIGSDGLC 110 + + ++ K KT + + + +A A + GL Sbjct 309 ESYLASKSKSKDVKD-KTPLALIIAPTRELAHQITAHLTALCAKGAFEAPLIASVTGGLA 367 Query 111 C--QSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLC 145 Q R++++ T G +EV GL Sbjct 368 VQKQRRQLEKADIIVGTPGR-----LWEVISTGHGLL 399 >sp|Q4IAS1|DBP4_GIBZE ATP-dependent RNA helicase DBP4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP4 PE=3 SV=1 Length=793 Score = 253 bits (646), Expect = 5e-72, Method: Composition-based stats. Identities = 86/433 (20%), Positives = 159/433 (37%), Gaps = 70/433 (16%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 +K +L L+ ++ ++ + + +K G Sbjct 50 TKKFSELPLSVPTAEGLEIAHFQTLTDVQARAVPLAL--------KGKDILGAAKTGSGK 101 Query 266 IVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + ++ + ++ + ALI+ P+RELA Q +++ L+I Sbjct 102 TLAFLIPVLEKLYRAQWTEFDGLGALIISPTRELAAQIFEVLRKVG---TKHSFSAGLVI 158 Query 325 GGVAARDQLSVLENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + +++ L + ++I+V TPGR L T + + ++ LVLDEAD ++ G+ Sbjct 159 GGKSLKEEAERL-DRMNILVCTPGRMLQHFDQTAGFDANNLQILVLDEADRIMDMGFQSA 217 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK--GEDSVPDTV 441 ++ + +P + Q ++ SAT S V L+ + P +V + + P + Sbjct 218 VDALIEHLP------RERQTLMFSAT-QSKKVSDLARLSLKDPEYVSVHEAAVSATPTNL 270 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V P T++L + I Sbjct 271 QQHYI-VTPLTEKL---------------------------------------DTLYGFI 290 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K + + I+F + + + F G + LHG +K R + RF Sbjct 291 KANLKSKIIVFLSSGKQVRFVYESFRHLQPG-------IPLLHLHGRQKQGARMEITSRF 343 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 L TDV ARGID V +VI P++ Y+HR+GR R E G A+ + Sbjct 344 TAAKQTCLFATDVVARGIDFPAVDWVIQADCPEDVDTYIHRVGRTARYESNGRAVLFLDP 403 Query 622 EKEKVWYHVCSSR 634 +E + Sbjct 404 SEEPGMLKKLELK 416 Score = 89.8 bits (221), Expect = 4e-17, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 56/120 (47%), Gaps = 8/120 (7%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FSE+ + A+ +E + TD+QA ++PL L G D+L AA+TGSGKT AF IPV+ Sbjct 51 KKFSELPLSVPTAEGLEIAHFQTLTDVQARAVPLALKGKDILGAAKTGSGKTLAFLIPVL 110 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG---SDGLCCQSREVKE 118 + +Y + +G S + ++ S GL + +KE Sbjct 111 EKLYRAQWTEFDG-----LGALIISPTRELAAQIFEVLRKVGTKHSFSAGLVIGGKSLKE 165 >sp|Q5ZLN8|DDX55_CHICK ATP-dependent RNA helicase DDX55 OS=Gallus gallus OX=9031 GN=DDX55 PE=2 SV=1 Length=591 Score = 248 bits (634), Expect = 6e-72, Method: Composition-based stats. Identities = 87/353 (25%), Positives = 144/353 (41%), Gaps = 57/353 (16%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 + K A+I+ P+RELA Q + F K+ PK ++L+IGG + + + Sbjct 75 EEKLKKMQVGAIIITPTRELAIQIDEVLTHFTKHF--PKFSQILLIGGRNPMEDVEKFKE 132 Query 338 NGVDIVVGTPGRLDDLVSTGKLNL------SQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 +G +I+V TPGRL+DL L + LVLDEAD LL G+ +N + + Sbjct 133 HGGNIIVATPGRLEDLFRRKADGLDLASCVKSLDVLVLDEADRLLDMGFESSLNAILAFL 192 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P K+ + + SAT + +V+ L + P + +K + Sbjct 193 P------KQRRTGLFSAT-QTQEVENLVRAGLRNPVRISVKEKGVAATNTQ--------- 236 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + RL ++ K V +++HK ++ ++ Sbjct 237 --KTPTRLENYYMICKADE----------------------KFNQLVHFLRQHKQEKHLV 272 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T + + + Q +C+HG K H+R + F++ L+C Sbjct 273 FFSTCACVEYYGKAL-------ESLIKQVKIMCIHGKMK-HKRNKIFTEFRRLAGGILVC 324 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 TDV ARGIDI V +V+ P +VHR GR R G A+ + +E Sbjct 325 TDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTARIGNAGSALVFLLPMEE 377 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 50/103 (49%), Gaps = 6/103 (6%) Query 4 FSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +S + + P + +A++++ + T +Q+ +IPL + DV A TGSGKT AF IP++ Sbjct 9 WSSLPVALSPGVLRALQDLGFDRMTPVQSATIPLFMSNKDVAAEAVTGSGKTLAFVIPIL 68 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 +I+ ++E K + + + + + F Sbjct 69 EILLR----REEKLKKMQVGAIIITPTRELAIQIDEVLTHFTK 107 >sp|Q0CI35|MAK5_ASPTN ATP-dependent RNA helicase mak5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=mak5 PE=3 SV=2 Length=774 Score = 253 bits (645), Expect = 6e-72, Method: Composition-based stats. Identities = 103/495 (21%), Positives = 193/495 (39%), Gaps = 55/495 (11%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDGYI 266 + LGL+ EI + ++ + + + G +A Y Sbjct 205 ESLGLSPEILNSLSKLKFSSPTAVQKSCIPPILDGHDVVGKASTGSGKTLAFGIPILEYY 264 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + + +P ALI+ P+RELA Q + +I + + R L+ GG Sbjct 265 LEKKRRET--KNKDDKKETSPIALILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGG 322 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDF 383 ++ + Q +L NG DIV+GTPGR+ +++S G+ + ++++LV+DEAD LLS+G+ Sbjct 323 LSVQKQQRLL-NGADIVIGTPGRVWEVLSGGQGLISKMKEIKYLVVDEADRLLSEGHFKE 381 Query 384 INRMHNQIPQ---------------VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 + + + + + Q +V SAT H +KL+ K Sbjct 382 AHEILAALDREEINDFPGAEEDESDDEDSKTQRQTLVFSATFHRDLQQKLAGKG------ 435 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 G D + + L ++L + + ++ E E Sbjct 436 -KWTGSDLMNK---------QESMEYLLKKLNFREEKPKFIDVNPVSQMAEGLKEGIVEC 485 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + K Y + H + ++F + L Q+ + Q + LH Sbjct 486 AAMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRLTQFL---------QALQLPALALHSS 536 Query 549 RKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 R +++ERF L+ TDVAARG+DI G+ +VI+ P YVHR GR Sbjct 537 MAQKARLRSVERFSSPTADPSTILVATDVAARGLDIKGIDFVIHYHAPRTADTYVHRSGR 596 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 RA G ++ + A E+ + + N + + + +++S +++ Sbjct 597 TARAGASGKSVIICAPEEMVGVVRLAAKVHANMANGKRLPLESLEL---DRRIVSRVKQR 653 Query 666 LNCTISQVEPDIKVP 680 + + +I Sbjct 654 VTLAARICDANIAKE 668 Score = 115 bits (289), Expect = 2e-25, Method: Composition-based stats. Identities = 31/90 (34%), Positives = 51/90 (57%), Gaps = 0/90 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PEI ++ ++ + PT +Q IP IL G DV+ A TGSGKT AF IP+ Sbjct 201 ISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPILDGHDVVGKASTGSGKTLAFGIPI 260 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK 90 ++ E + + + K K A +L+ Sbjct 261 LEYYLEKKRRETKNKDDKKETSPIALILSP 290 >sp|Q2UMY7|MAK5_ASPOR ATP-dependent RNA helicase mak5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=mak5 PE=3 SV=1 Length=757 Score = 252 bits (643), Expect = 7e-72, Method: Composition-based stats. Identities = 102/496 (21%), Positives = 192/496 (39%), Gaps = 56/496 (11%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAPDGYI 266 + LGL+ EI + ++ A + + G +A Y Sbjct 187 ESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGRDVIGKASTGSGKTLAFGIPILEYY 246 Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ S + ++ P AL++ P+RELA Q +I + + R L+ GG Sbjct 247 LEKLRSKTQKDSEKTE--TTPIALVLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGG 304 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDF 383 ++ + Q VL N DIV+GTPGR+ +++S+G + ++FLV+DEAD LLS+G+ Sbjct 305 LSLQKQQRVLTN-ADIVIGTPGRVWEVLSSGHGLIRKMQAIKFLVIDEADRLLSEGHFKE 363 Query 384 INRMHNQIPQV----------------TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 + + + +V Q +V SAT H +KL+ K Sbjct 364 AHEILAALDRVVDGEFPDESSDESDDELDPKSGRQTLVFSATFHRDLQQKLAGK------ 417 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 G+ + D + + L ++L + + ++ N E E Sbjct 418 -----GKWTGGDIMSQ-----KESMEYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVE 467 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + K + + H + ++F + + Q + LH Sbjct 468 CAAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRR---------LTQLLQTLQLPALALHS 518 Query 548 DRKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 R +++ERF L+ TDVAARG+DI G+ +V++ P YVHR G Sbjct 519 SMAQKARLRSVERFSSPSSDPSSILVATDVAARGLDIKGIDFVVHYHAPRTADAYVHRSG 578 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 R RA G ++ + + ++ + + N + + + +++S +++ Sbjct 579 RTARAGASGKSVIICSPDEMVGVVRLAAKVHANMANRKKVPLESLEL---DRRVVSRVKQ 635 Query 665 HLNCTISQVEPDIKVP 680 + V+ +I Sbjct 636 RVTLAARIVDSNIAKE 651 Score = 118 bits (296), Expect = 3e-26, Method: Composition-based stats. Identities = 34/90 (38%), Positives = 51/90 (57%), Gaps = 0/90 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PEI + +M + PT +Q IP IL G DV+ A TGSGKT AF IP+ Sbjct 183 VSAWESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGRDVIGKASTGSGKTLAFGIPI 242 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNK 90 ++ E L+ + + KT A VL+ Sbjct 243 LEYYLEKLRSKTQKDSEKTETTPIALVLSP 272 >sp|A5DIX5|ROK1_PICGU ATP-dependent RNA helicase ROK1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=ROK1 PE=3 SV=2 Length=537 Score = 246 bits (629), Expect = 8e-72, Method: Composition-based stats. Identities = 108/489 (22%), Positives = 184/489 (38%), Gaps = 84/489 (17%) Query 227 LFPACVLKNAELK--FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN---------- 274 L C L L G E + A ++ D SG Sbjct 107 LIARCNLNRKLLANLIASGYSEPTAIQCEAIPASAEGRDLIACAPTGSGKTLAYLIPMAQ 166 Query 275 AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 A ++ K + +++ P+ ELA Q + L L+ VA++ S Sbjct 167 ALISSPKTKNYGIRGVVIAPTNELAIQIYQTLAPM---CRGSNLNVTLLSKQVASKISSS 223 Query 335 VL-ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 ++ N D+++ TP RL DLV +++LS+V LV+DEAD L G+ + + + + Sbjct 224 IISANKFDVLICTPLRLIDLVKKEQVDLSKVEHLVIDEADKLFDHGFVEQTDEILSHC-- 281 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 + + SAT+ S V++++ IM + + ++ ++ +V + Sbjct 282 ---TLPTRRTSMFSATIPSG-VEEMANSIMKDQIRIIVGHKEGASTSIDQKLVFTGNEEG 337 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 +L + + + G P IIF Sbjct 338 KL-------------LAIRQMVQQGEFKP-------------------------PIIIFL 359 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 ++ L I + + +H +R P +R++ + RFK GD LI TD Sbjct 360 QSIPRAKALFHELIYD---------KLNVEVIHAERTPKQREEAIRRFKNGDAWVLITTD 410 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS- 632 V ARG+D GV VIN +P Q YVHRIGR GR + G A++ E + V + Sbjct 411 VLARGVDFKGVNLVINYDVPQTSQAYVHRIGRTGRGGKEGKAVTFFTKEDKLAIKPVLNV 470 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE-------EHLNCTISQVEPDIKVPVDEFD 685 + GC+ G + W M+ L++ E E IS V + + Sbjct 471 MKQSGCHE-------GYSEWMESMEKLTKKEKQQIKQHEIKRKKISTVPQVVSKKRKQRK 523 Query 686 GKVTYGQKR 694 + ++R Sbjct 524 EMIEASKRR 532 Score = 104 bits (259), Expect = 5e-22, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (5%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F ++ + ++ + + PT IQ E+IP G D++ A TGSGKT A+ Sbjct 101 IGSFEDLIARCNLNRKLLANLIASGYSEPTAIQCEAIPASAEGRDLIACAPTGSGKTLAY 160 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQ-MNPYDRGSAFAIG 105 IP+ Q + + K + G +G T + +Q + P RGS + Sbjct 161 LIPMAQALISSPKTKNYGIRGVVIAPTNELAIQIYQTLAPMCRGSNLNVT 210 >sp|A3LWH3|DBP7_PICST ATP-dependent RNA helicase DBP7 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DPB7 PE=3 SV=2 Length=733 Score = 251 bits (641), Expect = 1e-71, Method: Composition-based stats. Identities = 107/446 (24%), Positives = 179/446 (40%), Gaps = 53/446 (12%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDG----FVALSKAPDGYIVKSQHSGNAQV 277 +++ + F + K FK P K LS D +I SG Sbjct 140 VEDASTFEGLGINERLSKHLTETLRFKNPTKVQKSVIPTMLSTERDLFIKAQTGSGKTLS 199 Query 278 TQTKF-------------LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 + A+I+ P+RELA Q ++ + + + ++I Sbjct 200 FLLPIFHKLMMENKHKINRDSGLFAVILTPTRELATQIYGVLETLTRCYHH--IVPGIVI 257 Query 325 GGVAARDQLSVLENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + + + + GV+I+VGTPGRL D + +T L++SQ+R+L+LDE D L+ G+ + Sbjct 258 GGEKKKSEKARIRKGVNILVGTPGRLADHMENTESLDISQLRWLILDEGDKLVELGFEET 317 Query 384 INRMHNQIPQVTSDGK----------RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 I ++ N I + + + R ++CSAT+ + +V+KL I++ P + Sbjct 318 ITKITNLITRNSQIMESMHKWQGLPVRRINLLCSATMQN-NVEKLGSIILNNPEMISDGS 376 Query 434 -------EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 E + PD + VV V PK + I +D ++TR S Sbjct 377 SSGKHSEEVTAPDQLIQNVVVVPPKLRLVTLSAILKKISSDMSGTNNSTRTIVFFSCSDS 436 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 K+ K D+ K++ +E G G + LH Sbjct 437 VNFHFDVFTRGGNTFKKVKNDE-----SGKLETVEVENDTPLIGQGT-------AVYKLH 484 Query 547 GDRKPHERKQNLERF---KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 G R L+ F K + L CTDVA+RG+D+ + VI P +++HRI Sbjct 485 GSLSQQTRTSTLQAFIKDSKSNHSILFCTDVASRGLDLPNIASVIEYDPPFTIDDHLHRI 544 Query 604 GRVGRAERMGLAISLVATEKEKVWYH 629 GR R + G A + E+ + Sbjct 545 GRSARVGKEGTATLFLLPGNEEGYVD 570 Score = 77.9 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 7/132 (5%) Query 2 AAFSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIP 59 + F +G+ +++ + E + + PT +Q IP +L D+ + A+TGSGKT +F +P Sbjct 144 STFEGLGINERLSKHLTETLRFKNPTKVQKSVIPTMLSTERDLFIKAQTGSGKTLSFLLP 203 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ---SREV 116 + + K + G + + + Y + E Sbjct 204 IFHKLMMENKHKINRDSGLFAV--ILTPTRELATQIYGVLETLTRCYHHIVPGIVIGGEK 261 Query 117 KEWHGCRATKGL 128 K+ R KG+ Sbjct 262 KKSEKARIRKGV 273 >sp|Q6ZPL9|DDX55_MOUSE ATP-dependent RNA helicase DDX55 OS=Mus musculus OX=10090 GN=Ddx55 PE=1 SV=2 Length=600 Score = 248 bits (632), Expect = 1e-71, Method: Composition-based stats. Identities = 83/354 (23%), Positives = 142/354 (40%), Gaps = 57/354 (16%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + K N A+++ P+RELA Q + F K+ P+ ++L IGG + + + Sbjct 75 EEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHF--PQFSQILWIGGRNPGEDVERFKQ 132 Query 339 -GVDIVVGTPGRLDDLVSTGKLNL------SQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 G +I+V TPGRL+D+ L + LVLDEAD LL G+ IN + + Sbjct 133 HGGNIIVATPGRLEDMFRRKAEGLDLASCVKSLDVLVLDEADRLLDMGFEASINTILEFL 192 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P K+ + + SAT + +V+ L + P + +K + + Sbjct 193 P------KQRRTGLFSAT-QTQEVENLVRAGLRNPVRISVKEKGVAASSTQ--------- 236 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + RL ++ K V ++ + ++ ++ Sbjct 237 --KTPSRLENHYMICKADE----------------------KFNQLVHFLRSRQQEKHLV 272 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T + + + + +C+HG K ++R + F+K L+C Sbjct 273 FFSTCACVEYYGKAL-------EALLKKVKILCIHGKMK-YKRNKIFMEFRKLQSGILVC 324 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 TDV ARGIDI V +V+ P +VHR GR R G A+ + +E Sbjct 325 TDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVFLLPMEEA 378 Score = 96.7 bits (239), Expect = 1e-19, Method: Composition-based stats. Identities = 27/104 (26%), Positives = 50/104 (48%), Gaps = 6/104 (6%) Query 3 AFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 A+ + + P + A+ E+ + T +Q+ +IPL + DV A TGSGKT AF IP+ Sbjct 8 AWESLQVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPI 67 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 ++I+ + ++ + G I + + + + S F Sbjct 68 LEILLRREEKLKKNQVGAIVI----TPTRELAIQIDEVLSHFTK 107 >sp|Q4HZ68|DBP7_GIBZE ATP-dependent RNA helicase DBP7 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP7 PE=3 SV=1 Length=744 Score = 251 bits (640), Expect = 2e-71, Method: Composition-based stats. Identities = 125/602 (21%), Positives = 217/602 (36%), Gaps = 84/602 (14%) Query 166 GFGGTGKKSHNKQFDNYGEEFTMHDTIG--CYLDIDKGHVKFSKNGKDLGLAFEIPPHMK 223 G GG +S + Q D ++ I + + K G+ P + Sbjct 94 GHGGASGQSRSHQSDGKSKQ-----VISRLFSFNPAQKTEADEKQGEWTAPEATNAP-LS 147 Query 224 NQALFPACVLKNAELKFNFGEEEFKFPPKDG----FVALSKAPDGYIVKSQHSGNAQVTQ 279 + A F + + G+ + P L+ + D ++ SG Sbjct 148 DVANFGTLTISARLVD-ELGKMGLERPTGIQNKVIPHMLTSSSDAFVQAETGSGKTLAYL 206 Query 280 TKFL----------------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 L + A+IV P+RELA+Q +++ + P L I Sbjct 207 LPILHRVLLLSVKGGAQIHRDSGAFAIIVAPTRELAKQVHTVLEKLIR--PFPWLVSTAI 264 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG + + + + + GV+ +V TPGRL D + +T LNLS VR+L+LDE D L+ G+ D Sbjct 265 TGGESKKAEKARIRKGVNFLVATPGRLADHIDNTKALNLSIVRWLILDEGDRLMDLGFED 324 Query 383 FINRMH---------NQIPQVTSD---GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 + ++ + +P T +R ++CSAT+ +V+KL E + T++ Sbjct 325 DLKKVITALKAVDVSDTLPDGTPLKALPERRVTVLCSATM-KMNVQKLGEMSLADATFLA 383 Query 431 LKGED----------SVPDTVHHV--VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 K ED P +H VVP + L L + R Sbjct 384 AKKEDMELDVQKSEMKAPAQLHQYYSVVPAKLRLVTLISYLKSTFSRRGKTMKAIIFISC 443 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 A+S + E ++ A + +++ + + Sbjct 444 ADSVDFHYELLRDPNTTEAP--------------VAASKEAESISKTVSKAAYITSPASP 489 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 + +HG R L+ F LI TDV++RG+DI V VI Sbjct 490 EVVLHRMHGSLSQPIRTATLKSFSACKSPSLLITTDVSSRGLDIPSVDLVIEYDPAFSFA 549 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-----------SRGKGCYNTRLKED 646 +++HR+GR RA + G A+ + E+ + + S + T+L+ Sbjct 550 DHIHRVGRTARAGKPGDALLFLLPGTEEGYIELMKGSTTPTSQSYDSILQKGMMTKLEFP 609 Query 647 GGCTIWYNEMQLLSEIEEHLNCTISQ-VEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHV 705 T + + E L I Q + D K +G ++ + A + H Sbjct 610 VETTAKPEDGHSFHDKAESLQLHIEQRLLEDTKRLELARNGFKSHIRAYATHTKEERKHF 669 Query 706 DI 707 DI Sbjct 670 DI 671 Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 50/133 (38%), Gaps = 5/133 (4%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIP 59 +A F + + + + +M PT IQ + IP +L D + AETGSGKT A+ +P Sbjct 149 VANFGTLTISARLVDELGKMGLERPTGIQNKVIPHMLTSSSDAFVQAETGSGKTLAYLLP 208 Query 60 VIQI-VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA---IGSDGLCCQSRE 115 ++ + ++K + + + + + E Sbjct 209 ILHRVLLLSVKGGAQIHRDSGAFAIIVAPTRELAKQVHTVLEKLIRPFPWLVSTAITGGE 268 Query 116 VKEWHGCRATKGL 128 K+ R KG+ Sbjct 269 SKKAEKARIRKGV 281 >sp|A7F8V8|DBP7_SCLS1 ATP-dependent RNA helicase dbp7 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp7 PE=3 SV=1 Length=877 Score = 253 bits (646), Expect = 2e-71, Method: Composition-based stats. Identities = 114/548 (21%), Positives = 201/548 (37%), Gaps = 62/548 (11%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG----FVALSKAPDGY 265 + P + A F L + + K P +S D + Sbjct 239 ESEPAKPSNAPLTEEMATFTNLGLSRRLAAHLSTKLDMKAPTAIQKASVTQLISDDSDAF 298 Query 266 IVKSQHSGNAQVTQTKFL---------------PNAPKALIVEPSRELAEQTLNNIKQFK 310 I SG + + A+I+ P+REL +Q +++ Sbjct 299 IQAETGSGKTLAYLLPIVERILALSDNGIQIHRDSGLFAIILSPTRELCKQIAAVLEKVL 358 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVL 369 + P + + GG + + + + L GV+I+V TPGRL D + +T LN++ VR+LVL Sbjct 359 RC--APWIVGTTVNGGESKQSEKARLRKGVNILVATPGRLADHLDNTEVLNVATVRWLVL 416 Query 370 DEADGLLSQGYSDFINRMHNQI---------PQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 DE D L+ G+ + I + +I ++ S KR I+CSAT+ +V++L E Sbjct 417 DEGDRLMELGFEEEIKGIVEKIGRRSVASGSSEMMSLPKRRVTILCSATM-KMNVQRLGE 475 Query 421 KIMHFPTWVDLKGED-----------------SVPDTVHHVV--VPVNPKTDRLWERLGK 461 + + + S P + VP + L L + Sbjct 476 ISLKDAVHIQADPSEQEKQDKANGIEADDKAFSAPTQLKQSYAIVPAKLRLVTLTALLKR 535 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + R V A+S + E + A +E K+D + Sbjct 536 AFARKGSVMKAIVFMSCADSVDFHFSLFSR-SAEKSAEASEEGKVDPP------TLPKSE 588 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGID 580 L + I G + LHG + R L+ + + D LICTDVA+RG+D Sbjct 589 LIKETITHGATISNNSNPVILHKLHGSLAQNIRTATLKAYSESADPCVLICTDVASRGLD 648 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS---RGKG 637 + V +VI P ++++HR+GR RA R G A+ + E+ + + +S G+ Sbjct 649 LPNVDFVIEYDPPFSAEDHLHRVGRTARAGREGRALIFLMPGTEEEYVSILASGYREGRK 708 Query 638 CYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAG 697 ED + + E + + + D ++ + A Sbjct 709 ALTHHTAEDLIQKGFGGTGREWEERATNFQLEVERWSLDSPRYLEMARRGFQSHIRAYAT 768 Query 698 GGSYKGHV 705 + + H+ Sbjct 769 HVANERHI 776 Score = 72.9 bits (177), Expect = 6e-12, Method: Composition-based stats. Identities = 30/133 (23%), Positives = 55/133 (41%), Gaps = 5/133 (4%) Query 1 MAAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSI 58 MA F+ +G+ +A + ++D PT IQ S+ ++ D + AETGSGKT A+ + Sbjct 254 MATFTNLGLSRRLAAHLSTKLDMKAPTAIQKASVTQLISDDSDAFIQAETGSGKTLAYLL 313 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP---YDRGSAFAIGSDGLCCQSRE 115 P+++ + + + + S + ++ A G E Sbjct 314 PIVERILALSDNGIQIHRDSGLFAIILSPTRELCKQIAAVLEKVLRCAPWIVGTTVNGGE 373 Query 116 VKEWHGCRATKGL 128 K+ R KG+ Sbjct 374 SKQSEKARLRKGV 386 >sp|A3GGE9|DBP4_PICST ATP-dependent RNA helicase DBP4 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP4 PE=3 SV=2 Length=765 Score = 251 bits (641), Expect = 2e-71, Method: Composition-based stats. Identities = 87/461 (19%), Positives = 167/461 (36%), Gaps = 74/461 (16%) Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVA 257 +D+ + DL + E + + ++ + E+ + Sbjct 41 VDEKSISQFS---DLPITQETLRGLNESSFMSLTDIQKKTIPIALKGED--------LMG 89 Query 258 LSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 ++ G + + + K + ALIV P+RELA QT + + KY Sbjct 90 TARTGSGKTLAFLIPVVESLIRNKITEHDGLAALIVSPTRELAVQTFEVLTKIGKYN--- 146 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-KLNLSQVRFLVLDEADGL 375 L+ GG + + + ++I+VGTPGR+ ++ + S ++ LVLDEAD Sbjct 147 TFSAGLVTGGKDVQYEKERVSR-MNILVGTPGRISQHLNEAVGMETSNLQVLVLDEADRC 205 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L G+ I+ + +P Q ++ SAT+ S VK L+ + P + + + Sbjct 206 LDMGFKKQIDNIVGHLP------PTRQTLLFSATV-SDSVKDLARLSLTNPKRIGVSSDQ 258 Query 436 ---SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + P+++ + + Sbjct 259 DVSATPESLDQYYIRIPLDE---------------------------------------- 278 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 K + IK H + ++F + + F G S + L+G K Sbjct 279 KLDVLWSFIKSHLKSKILVFFSSSKQVQYAYETFRTLQPG-------ISLLKLYGRHKQT 331 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 R + +F + L TD+ ARG+D + +V+ V P++ YVHR+GR R R Sbjct 332 SRLETTVKFTQAQYACLFATDIVARGLDFPAIDWVVQVDCPEDAVTYVHRVGRAARFGRQ 391 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 G ++ ++ +E+ + +K+ +I Sbjct 392 GKSLLMLLPSEEEGMLKRLENNKIEPKFMNIKQKSKKSIRP 432 Score = 94.0 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 52/107 (49%), Gaps = 5/107 (5%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ FS++ + E + + E ++ TDIQ ++IP+ L G D++ A TGSGKT AF IPV Sbjct 46 ISQFSDLPITQETLRGLNESSFMSLTDIQKKTIPIALKGEDLMGTARTGSGKTLAFLIPV 105 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 ++ + + +G S + + ++ + + Sbjct 106 VESLIRNKITEHDG-----LAALIVSPTRELAVQTFEVLTKIGKYNT 147 >sp|Q6AZV7|DDX55_XENLA ATP-dependent RNA helicase DDX55 OS=Xenopus laevis OX=8355 GN=ddx55 PE=2 SV=1 Length=594 Score = 247 bits (630), Expect = 2e-71, Method: Composition-based stats. Identities = 89/393 (23%), Positives = 160/393 (41%), Gaps = 59/393 (15%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 + K N ALI+ P+RELA Q + F K+ P+ ++L+IGG D + + Sbjct 75 EEKLKKNQVGALIITPTRELAVQIDEVLSCFTKHF--PQFSQILLIGGSNPVDDVRKFKE 132 Query 338 NGVDIVVGTPGRLDDLVSTGK------LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 +G +I+V TPGRL+D+ + + + L+LDEAD LL G+ IN + + Sbjct 133 HGGNIIVATPGRLEDMFRRQADGLDLVICVKTLDVLILDEADRLLDMGFEASINTILGFL 192 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P K+ + + SAT + +++ L + P + +K + + Sbjct 193 P------KQRRTGLFSAT-QTQELENLVRAGLRNPVRIAVKEKGVAATSTQ--------- 236 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 + RL ++ K + +++ K ++ ++ Sbjct 237 --KTPIRLQNYYMICKADE----------------------KFNKLIAFLQKRKQEKHLV 272 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLIC 571 F T + + + +C+HG K H+R + F+K + L+C Sbjct 273 FFSTCACVEYYGKAL-------EMLLKPVKVMCIHGKMK-HKRNRIFTEFRKINSGILVC 324 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 TDV ARGIDIH V +V+ P +VHR GR R G A+ + +E + Sbjct 325 TDVMARGIDIHEVNWVVQYDPPSSASAFVHRCGRTARIGHHGSALVFLLPMEESYVSFL- 383 Query 632 SSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 S + C + E +++ ++E + Sbjct 384 -SINQKCPLQEMTELIISVDLLPKLKAMAETDR 415 Score = 86.7 bits (213), Expect = 2e-16, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 6/104 (6%) Query 3 AFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + + + I + +EE+ + T +Q+ +IPL + D+ A TGSGKT AF IP+ Sbjct 8 TWDSLPQKLNGSIRRTLEELKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKTLAFVIPL 67 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 ++I+ + + ++ + G I + + + + S F Sbjct 68 LEILLKREEKLKKNQVGALII----TPTRELAVQIDEVLSCFTK 107 >sp|Q5BCI0|MAK5_EMENI ATP-dependent RNA helicase mak5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=mak5 PE=3 SV=1 Length=770 Score = 251 bits (640), Expect = 3e-71, Method: Composition-based stats. Identities = 103/502 (21%), Positives = 185/502 (37%), Gaps = 72/502 (14%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA--PDGYIVKS 269 LGL+ E + ++ + + P DG + KA G + Sbjct 202 LGLSPETLTSLSKLKFSTPTSVQKSCIP----------PILDGHDVIGKASTGSGKTLAF 251 Query 270 ---------QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + + + P ALI+ P+RELA Q +I R Sbjct 252 GLPILEHYLERERRKTIDSEEEKEKIPIALILSPTRELAHQLQKHIYGLISNAPGVNART 311 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLS 377 L+ GG++ + Q +LE DIV+GTPGR+ +++ TG+ + ++FLV+DEAD LLS Sbjct 312 ALLTGGLSVQKQQRLLET-ADIVIGTPGRVWEVLRTGQGLIRRMQGIKFLVIDEADRLLS 370 Query 378 QGYSDFINRMHNQIPQVTSDGK----------------RLQVIVCSATLHSFDVKKLSEK 421 +G+ + + + + +V G Q +V SAT H +KL+ K Sbjct 371 EGHFKEVEDILSSLDRVEDGGPPDEEDDSSEENVVPGVERQTLVFSATFHRDLQQKLAGK 430 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 ++ + L ++L + + ++ Sbjct 431 G----------------KWTGGDIMNKKESMEYLLQKLNFREEKPKFIDVNPVSQMAEGL 474 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 E E + K Y + H + ++F + + Q Q Sbjct 475 KEGIVECPAMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRITQLLQTL---------QLP 525 Query 542 CVCLHGDRKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + LH R +++ERF L+ TDVAARG+DI G+ +VI+ P Sbjct 526 ALALHSSMAQKARLRSVERFSSSTANPGTILVATDVAARGLDIKGIDFVIHYHAPRTADT 585 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 YVHR GR RA G ++ + + E+ + + N + + + ++ Sbjct 586 YVHRSGRTARAGASGKSVIICSPEEMVGVVRLAAKVHANMANGKKLPLESLEL---DRRI 642 Query 659 LSEIEEHLNCTISQVEPDIKVP 680 +S + + + + +I Sbjct 643 VSRVRQRVVLAARITDSNIAKE 664 Score = 113 bits (283), Expect = 1e-24, Method: Composition-based stats. Identities = 39/157 (25%), Positives = 68/157 (43%), Gaps = 11/157 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ +G+ PE ++ ++ + PT +Q IP IL G DV+ A TGSGKT AF +P+ Sbjct 196 ISAWEPLGLSPETLTSLSKLKFSTPTSVQKSCIPPILDGHDVIGKASTGSGKTLAFGLPI 255 Query 61 IQIVYETLKDQQ---EGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVK 117 ++ E + + E +K K I S + + G+ ++ + Sbjct 256 LEHYLERERRKTIDSEEEKEKIPIALILSPTRELAHQLQKHIYGLISNAPGVNARTALLT 315 Query 118 EWHGCRA------TKGLMKGK--HYYEVSCHDQGLCR 146 + T ++ G +EV QGL R Sbjct 316 GGLSVQKQQRLLETADIVIGTPGRVWEVLRTGQGLIR 352 >sp|P0CQ90|MAK5_CRYNJ ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=MAK5 PE=3 SV=1 Length=772 Score = 251 bits (640), Expect = 3e-71, Method: Composition-based stats. Identities = 111/481 (23%), Positives = 187/481 (39%), Gaps = 79/481 (16%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP----------- 284 LK +F F P A+ G V + T LP Sbjct 181 PSLKRSFLASSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPILHYLLGQRKS 240 Query 285 -----NAPKALIVEPSRELAEQTLNNIKQFKKYI----------DNPKLRELLIIGGVAA 329 AL++ P+RELA Q ++++ K+ P++ ++GG++A Sbjct 241 KAGIKRPLSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSA 300 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + Q +LE G D++V TPGRL DL+ ++ +RFLV+DEAD ++ G+ + Sbjct 301 QKQKRILERGCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELES 360 Query 387 MHNQ----------------------IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 + + + ++ + +Q V SATL K L + Sbjct 361 IVKLTQRSTAQQGPDDDDPVFQAMATLFEESTAREDMQTFVFSATLSKDLQKNLKRRSRS 420 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 + KG+ T+ L E+L + + ++ E Sbjct 421 W------KGKGKRSSTLE-----------DLVEKLDFRDENPEVIDLSPEGGVVSSLRES 463 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 E+ K K Y + + ++I+F + + P Q Sbjct 464 MIESTKDDKDLYLYYFLLRYP-GRSIVFVNSIDS---------IRRLLPLFTLLQLPVFP 513 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LH + +R +NL+RFK LI TDVAARG+DI V +V++ LP Y+HR G Sbjct 514 LHSHLQQKQRLKNLDRFKSNPKGILIATDVAARGLDIPQVDHVVHFNLPRTADAYIHRSG 573 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK-EDGGCTIWYNEMQLLSEIE 663 R RA+ G A+ LV+ +++ V + S + L E G +++ +EIE Sbjct 574 RTARAQNEGFALQLVSPDEKSVQRALMKSLERTHELPDLPIEAGFLPSLRERLRVATEIE 633 Query 664 E 664 + Sbjct 634 K 634 Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 2/102 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S + + P + ++ + PT IQ+ +IP + G DV+ AETGSGKT A+S+P+ Sbjct 171 LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPI 230 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + + K + K+ + + + + D +A Sbjct 231 LHYLLGQRKSKAGIKRPLSAL--VLCPTRELALQVMDHLNAL 270 >sp|P0C2N7|DRS1_CHAGB ATP-dependent RNA helicase DRS1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DRS1 PE=3 SV=1 Length=795 Score = 251 bits (640), Expect = 4e-71, Method: Composition-based stats. Identities = 99/477 (21%), Positives = 177/477 (37%), Gaps = 81/477 (17%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA------------PDGYIVKSQHSGNA 275 F L L+ F P + A G Sbjct 278 FQGMSLSRPILR-GLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE 336 Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ + +++ P+RELA Q + + + D ++ L +GG++ + Q Sbjct 337 RLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLASHTD---IKFCLAVGGLSLKVQEGE 393 Query 336 LENGVDIVVGTPGR-LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 L D+V+ TPGR +D + ++ + V LVLDEAD +L G++D +N + +P Sbjct 394 LRLRPDVVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLP-- 451 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 K Q ++ SAT+ S V KL ++ P + + + T+ V + P + Sbjct 452 ----KSRQTMLFSATMTST-VDKLIRVGLNKPARIMVDSQKQTAVTLAQEFVRLRPGREE 506 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 +++ D VH + A L G + RA +H+ A Sbjct 507 KRMGYLGPYLQ-DPVHRTSHYLLQAEEDCSPDPDHLRLAGAFEHRAPWKHEPGSA----- 560 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 F+ G V +L+ TD+ Sbjct 561 ----------------------------------------------FRDGKVNYLLATDL 574 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS- 633 A+RG+DI G+ VIN P + YVHR+GR RA R G+AI+L A KV + Sbjct 575 ASRGLDIKGIDTVINYEAPQSLEIYVHRVGRTARAGRSGVAITLAAEPDRKVVKAAVRAG 634 Query 634 -RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVT 689 +R+ + W ++ + E+++ ++ + + + + ++ E K Sbjct 635 KAQGAKIISRVIDAADADKWQDQ---IDEMDDEIDEILQEEKEEKQLAQIEMQVKKG 688 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 53/107 (50%), Gaps = 6/107 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++F M + I + + + + PT IQA++IP+ L G DV+ A TGSGKT AF +P+ Sbjct 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 ++ + K K TT + + + + + A +D Sbjct 335 LERLLYRPK------KVPTTRVVVLTPTRELAIQCHSVATKLASHTD 375 >sp|Q2UE66|DBP7_ASPOR ATP-dependent RNA helicase dbp7 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp7 PE=3 SV=1 Length=760 Score = 250 bits (638), Expect = 4e-71, Method: Composition-based stats. Identities = 100/466 (21%), Positives = 176/466 (38%), Gaps = 38/466 (8%) Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG--- 254 + G F+ G LA + ++ L ++ A + E+ F + Sbjct 132 LIDGLDTFTNLGLSPSLAAHLLTKLE---LKAPTGIQKASMSQLLKEDSDAFIQAETGSG 188 Query 255 -----FVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 + L + S N++ + A+++ P+REL +Q ++ Sbjct 189 KTLAYLLPLVQRIMTVSNPKNMSTNSKGEPIVHRDSGLFAIVLAPTRELCKQISVVLESL 248 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLV 368 + + +IGG + + + L G++I+V TPGRL D + +T L++S VR+LV Sbjct 249 LRC--AHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTQALDVSNVRWLV 306 Query 369 LDEADGLLSQGYSDFINRMHNQIPQVTSDGK------RLQVIVCSATLHSFDVKKLSEKI 422 LDE D L+ G+ + + ++ + + I+CSATL +V+KL E Sbjct 307 LDEGDRLMELGFEKELQGIIQKLDARQRPSRIPGIPTKRTTILCSATL-KMNVQKLGEIS 365 Query 423 MHFPTWVDLKGEDS-------------VPDTVHHVVVPVNPKTD--RLWERLGKSHIRTD 467 + + D VP + V K L L ++ +R Sbjct 366 LKDAVHIKADPADEDGETKRKDDDGFRVPAQLKQSYAIVAAKLRLVTLTAYLKRTFMRKG 425 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 V A+S + E K +Y + E + + +K + I Sbjct 426 SVMKAIVFVSCADSVDFHFEVFSRRK-QYRDESEDEDEEKEDDDEDNSKTKSEASPHGTI 484 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPY 586 + LHG H R L F ++ + L+CTDVA+RG+D+ V Sbjct 485 APAVAFSNPSNPVKLHKLHGSLPQHVRTATLNAFSREREPSVLVCTDVASRGLDLPNVDL 544 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 VI ++ HRIGR R R G A+ + E+ + + Sbjct 545 VIEYDPAFSADDHTHRIGRTARLGRDGRALIFLMPGCEENYVEILK 590 Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (5%) Query 3 AFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPV 60 F+ +G+ P +A + +++ PT IQ S+ +L D + AETGSGKT A+ +P+ Sbjct 138 TFTNLGLSPSLAAHLLTKLELKAPTGIQKASMSQLLKEDSDAFIQAETGSGKTLAYLLPL 197 Query 61 IQIVY--ETLKDQQEGKKGKTTI 81 +Q + K+ KG+ + Sbjct 198 VQRIMTVSNPKNMSTNSKGEPIV 220 >sp|P0CQ91|MAK5_CRYNB ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=MAK5 PE=3 SV=1 Length=772 Score = 249 bits (636), Expect = 9e-71, Method: Composition-based stats. Identities = 111/481 (23%), Positives = 187/481 (39%), Gaps = 79/481 (16%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP----------- 284 LK +F F P A+ G V + T LP Sbjct 181 PSLKRSFLASSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPILHYLLGQRKS 240 Query 285 -----NAPKALIVEPSRELAEQTLNNIKQFKKYI----------DNPKLRELLIIGGVAA 329 AL++ P+RELA Q ++++ K+ P++ ++GG++A Sbjct 241 KAGIKRPLSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSA 300 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + Q +LE G D++V TPGRL DL+ ++ +RFLV+DEAD ++ G+ + Sbjct 301 QKQKRILERGCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELES 360 Query 387 MHNQ----------------------IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 + + + ++ + +Q V SATL K L + Sbjct 361 IVKLTQRSTAQQGPDDDDPVFQAMATLFEESTAREDMQTFVFSATLSKDLQKNLKRRSRS 420 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 + KG+ T+ L E+L + + ++ E Sbjct 421 W------KGKGKRSSTLE-----------DLVEKLDFRDENPEVIDLSPEGGVVSSLRES 463 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 E+ K K Y + + ++I+F + + P Q Sbjct 464 MIESTKDDKDLYLYYFLLRYP-GRSIVFVNSIDS---------IRRLLPLLTLLQLPVFP 513 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 LH + +R +NL+RFK LI TDVAARG+DI V +V++ LP Y+HR G Sbjct 514 LHSHLQQKQRLKNLDRFKSNPKGILIATDVAARGLDIPQVDHVVHFNLPRTADAYIHRSG 573 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK-EDGGCTIWYNEMQLLSEIE 663 R RA+ G A+ LV+ +++ V + S + L E G +++ +EIE Sbjct 574 RTARAQNEGFALQLVSPDEKSVQRALMKSLERTHELPDLPIEAGFLPSLRERLRVATEIE 633 Query 664 E 664 + Sbjct 634 K 634 Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 2/102 (2%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +S + + P + ++ + PT IQ+ +IP + G DV+ AETGSGKT A+S+P+ Sbjct 171 LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPI 230 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + + K + K+ + + + + D +A Sbjct 231 LHYLLGQRKSKAGIKRPLSAL--VLCPTRELALQVMDHLNAL 270 >sp|Q86IZ9|DDX52_DICDI Probable ATP-dependent RNA helicase ddx52 OS=Dictyostelium discoideum OX=44689 GN=ddx52 PE=3 SV=1 Length=668 Score = 246 bits (629), Expect = 1e-70, Method: Composition-based stats. Identities = 89/443 (20%), Positives = 174/443 (39%), Gaps = 67/443 (15%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 + VA++ G + + +++I+ P+RELA+Q N + K Sbjct 236 EREVVAIAPTGSGKTASFSIPILQALY--EPKKEGFRSVIIAPTRELAQQIYRNFRLLSK 293 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 R ++ + + L DI++ TP RL L+ L+L++V +LV DE Sbjct 294 ---GKPFRICVLSKNLHNQSTNENLIKNYDILITTPLRLVYLIKENLLSLNKVEYLVFDE 350 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD L + + + ++ + +L++ + SAT++ V++L IM P + + Sbjct 351 ADKLFDKNFQEQVDIVV-----TACQNPKLKICLFSATMN-QQVEELGHSIMKNPIKIII 404 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 +++ TV ++ V + +L Sbjct 405 GEQNAAAITVDQKLIYVGKEEGKLLA---------------------------------- 430 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 + I++ +IF ++K +L Q I G + +H +R Sbjct 431 -----VRQLIQKGLEPPILIFTQSKERAHDLFQELIFDG---------INVDVIHSERTQ 476 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R +++F+ G + LICT++ ARG+D GV +VIN P +Y+HRIGR GRA R Sbjct 477 FQRDTIVKKFRMGKIWVLICTELMARGMDFKGVNFVINFDFPHTLASYIHRIGRTGRAGR 536 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 G+A +L + + + + + W +++ + ++ Sbjct 537 PGVAYTLYTDADTPMLPTIVHAMKQSGSHVP--------DWMLNLKVQGKKKQQYRLKGV 588 Query 672 QVEPDIKVPVDEFDGKVTYGQKR 694 + E +P+ E +K Sbjct 589 ERESFSTIPLSERTSSKFKLRKN 611 Score = 88.3 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 28/97 (29%), Positives = 50/97 (52%), Gaps = 4/97 (4%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 M FS++ V + + E+ + P+ IQ + IP++L +V+ A TGSGKT +F Sbjct 194 MTEFSQLENRFKVRKYLLNNINEIGYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTASF 253 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQM 93 SIP++Q +YE K+ T + + +++ Sbjct 254 SIPILQALYEPKKEGFRSVIIAPTRELAQQIYRNFRL 290 >sp|A7TJS7|SPB4_VANPO ATP-dependent rRNA helicase SPB4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=SPB4 PE=3 SV=1 Length=607 Score = 245 bits (625), Expect = 1e-70, Method: Composition-based stats. Identities = 89/415 (21%), Positives = 152/415 (37%), Gaps = 55/415 (13%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIG---GVAAR 330 + TK +LIV P++ELA+Q + + F ++ + +R L++G Sbjct 73 EANTTKMKKGHFHSLIVSPTKELAKQIHSVFESFLEHYPENLYPIRSQLLVGTNVKTVRD 132 Query 331 DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D +EN I++GTPGR+ D + + S ++LDEAD LL + + + N Sbjct 133 DVSDFMENKPQILIGTPGRILDFLKIPSVKTSMCSMVILDEADRLLDVSFLKDMENIMNI 192 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 +P K+ + + SAT+ S + + + P V + + P ++ V Sbjct 193 LP------KQRRTGLFSATITSAG-DNIFKTGLRNPVKVTVNSKSQAPSSLKIDCAVVET 245 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 K E + I +K + I Sbjct 246 DK----------------------------------------KLEQVISIINNYKFKKCI 265 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FL 569 + T + K + LHG + R + LE F + L Sbjct 266 AYFPTCHSVTYFYSFMQYLLKKGIIKE-EIQIYSLHGKLQTSARIKTLETFTETISNAVL 324 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TDVAARGIDI V V+ + P + + ++HR GR GRA ++G AI+ + +E+ + Sbjct 325 LTTDVAARGIDIPDVDLVLQLDPPTDPEVFLHRCGRTGRANKLGKAITFLTPGREEDYIP 384 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYN-EMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + L +Y L E L+ + IK Sbjct 385 FMEVKNINLEEISLDIVNLPDNFYEIFKDWLLEDRARLDQAVKSYVAYIKTYSKH 439 Score = 87.5 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 27/101 (27%), Positives = 48/101 (48%), Gaps = 3/101 (3%) Query 4 FSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + ++ + P I AV+ M + T +QA +IPL DV++ + TGSGKT +F IP+ Sbjct 7 WDDLEYPIQPWIRSAVDVMGFENMTPVQAATIPLFARNKDVVVDSVTGSGKTVSFVIPIF 66 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + + + + + KKG S + + +F Sbjct 67 EKIVQEEANTTKMKKGHF-HSLIVSPTKELAKQIHSVFESF 106 >sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 OS=Homo sapiens OX=9606 GN=DDX52 PE=1 SV=4 Length=599 Score = 245 bits (624), Expect = 2e-70, Method: Composition-based stats. Identities = 102/459 (22%), Positives = 170/459 (37%), Gaps = 70/459 (15%) Query 193 GCYLDIDKGHVKFSKN-------GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEE 245 G ++ K + F +N G DL + + + +L+N L F Sbjct 130 GKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQN-ILDAGFQMP 188 Query 246 EFKFPPKD-----GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 G L+ AP G S + + +ALI+ P+RELA Sbjct 189 TPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELAS 248 Query 301 QTLNNIKQFKKYIDNPKLRELLI-IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK- 358 Q + + + R +I VAA+ DI+V TP RL L+ Sbjct 249 QIHRELIKIS---EGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPP 305 Query 359 -LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKK 417 ++L+ V +LV+DE+D L G + F +++ + TS R + SAT +DV++ Sbjct 306 GIDLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRR--AMFSATFA-YDVEQ 362 Query 418 LSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 + + V + +S +TV ++ V +T +L Sbjct 363 WCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLA-------------------- 402 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 +K+ ++F ++ L I +G Sbjct 403 -------------------VRELVKKGFNPPVLVFVQSIERAKELFHELIYEG------- 436 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 + +H +R +R + F+ G + LICT + ARGID GV VIN P Sbjct 437 --INVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSV 494 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 Y+HRIGR GRA G AI+ + + + V + + Sbjct 495 EYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVANVIQQ 533 Score = 94.8 bits (234), Expect = 7e-19, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 54/111 (49%), Gaps = 12/111 (11%) Query 1 MAAFSEMG----VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 +A F ++ + + Q + + + +PT IQ ++IP++L G ++L +A TGSGKT AF Sbjct 160 IATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAF 219 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 SIP++ + +Q KG + S + + + G+ Sbjct 220 SIPILMQL------KQPANKGFRAL--IISPTRELASQIHRELIKISEGTG 262 >sp|Q5VRY0|RH39_ORYSJ DEAD-box ATP-dependent RNA helicase 39 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0184500 PE=2 SV=1 Length=625 Score = 245 bits (625), Expect = 2e-70, Method: Composition-based stats. Identities = 96/425 (23%), Positives = 159/425 (37%), Gaps = 73/425 (17%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDG---YIVKSQHSGNAQVTQTKFL-------- 283 E+ GE P + V + G + SG + Sbjct 118 GEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLVQLLRRDEA 177 Query 284 -------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 P P+A+++ P+REL EQ K + + R ++ GG R Q L Sbjct 178 MLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHA---RFRSTMVSGGSRIRPQEDSL 234 Query 337 ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ--V 394 VD+VVGTPGR+ D + G + +++LVLDEAD + QG+ I + + Sbjct 235 NMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPLKNRAA 294 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 + Q ++ +AT+ V+KL ++ + T H + ++ ++ Sbjct 295 KPGDQGFQTVLVTATMTKA-VQKLIDEEFEGIVHLRTTTFQKRVATARHDFIKLSGSENK 353 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L L K ++ ++FC Sbjct 354 LEALLQVLEPSLA-------------------------------------KGNKVMVFCN 376 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK--GDVRFLICT 572 T ++ + + +Q S V HG+ ER +NL +F+ GD L+CT Sbjct 377 TLNSSRAVDHFLTE---------NQISTVNYHGEVPAEERVENLNKFRNEEGDCPTLVCT 427 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+AARG+D+ V +VI P +Y+HR GR R G SLVA + + + Sbjct 428 DLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGRTARMGAKGKVTSLVAKKDVTLATRIEE 486 Query 633 SRGKG 637 + K Sbjct 487 AMKKN 491 Score = 87.1 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 46/96 (48%), Gaps = 0/96 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F E+G+ E+ A+ EM PT+IQ +P +L G V++ + TGSGKT A+ +P+ Sbjct 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPL 168 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +Q++ K + + + Sbjct 169 VQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVF 204 >sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus OX=10116 GN=Ddx52 PE=2 SV=1 Length=598 Score = 244 bits (623), Expect = 3e-70, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 165/443 (37%), Gaps = 67/443 (15%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 D+ F + ++ ++ + ++ + ++ + G Sbjct 156 DLPDPIATFQQLDQEYKISPRLLQNILDAGFQVPTPIQMQAIPVML----------HGRE 205 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 L+ AP G S + + +AL++ P+RELA Q + + + Sbjct 206 LLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKIS---EGT 262 Query 317 KLRELLI-IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFLVLDEAD 373 R +I +AA+ DI+V TP RL L+ ++L+ V +LV+DE+D Sbjct 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQEPPGIDLTSVEWLVVDESD 322 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 L G + F +++ + TS R + SAT +DV++ + + V + Sbjct 323 KLFEDGKTGFRDQLASIFLACTSPKVRR--AMFSATFA-YDVEQWCKLNLDNIVSVSIGA 379 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 +S +TV ++ V +T +L Sbjct 380 RNSAVETVEQELLFVGSETGKLLA------------------------------------ 403 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +K+ ++F ++ L I +G + +H +R + Sbjct 404 ---MRELVKKGFNPPVLVFVQSIERAKELFHELIYEG---------INVDVIHAERTQQQ 451 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F+ G + LICT + ARGID GV VIN P Y+HRIGR GRA G Sbjct 452 RDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRG 511 Query 614 LAISLVATEKEKVWYHVCSSRGK 636 A++ + + + V + + Sbjct 512 KAVTFFTEDDKPLLRSVANVIQQ 534 Score = 97.9 bits (242), Expect = 7e-20, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 55/111 (50%), Gaps = 12/111 (11%) Query 1 MAAFSEMG----VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 +A F ++ + P + Q + + + +PT IQ ++IP++L G ++L +A TGSGKT AF Sbjct 161 IATFQQLDQEYKISPRLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAF 220 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 SIP++ + +Q KG + S + + + G+ Sbjct 221 SIPILMQL------KQPTNKGFRAL--VISPTRELASQIHRELIKISEGTG 263 >sp|Q6CK32|DBP7_KLULA ATP-dependent RNA helicase DBP7 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP7 PE=3 SV=1 Length=740 Score = 247 bits (631), Expect = 3e-70, Method: Composition-based stats. Identities = 100/478 (21%), Positives = 174/478 (36%), Gaps = 48/478 (10%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL-------- 258 N D F + + + + + + P K + + Sbjct 130 SNAHDEKAEVTYSNAPLVGDTFDSFGITDTMVSHLNVKMKISKPTKIQKLVIPPFLQAQN 189 Query 259 -----SKAPDGYIVKSQHSGNAQVT---QTKFLPNAPKALIVEPSRELAEQTLNNIKQFK 310 ++ G + + Q + AL+V P+RELA Q + Sbjct 190 DLFIHAQTGSGKTLAFLLPIFQSILSLGQNITRQSGCFALVVTPTRELANQIYQVTSELA 249 Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV----RF 366 + L L+IGG + + + L G + ++GTPGR+ D + K+ Q+ R+ Sbjct 250 QCC--HFLVPCLLIGGERKKSEKARLRKGANFIIGTPGRVLDHLQNTKVIKEQLAPSLRY 307 Query 367 LVLDEADGLLSQGYSDFINRMHNQIP-------QVTSDGKRLQVIVCSATLHSFDVKKLS 419 +VLDE D L+ G+ + + + N I Q KR+ ++CSAT+ +V KL Sbjct 308 VVLDEGDKLMELGFEETLKEILNIIHGIDIDTHQFPKLPKRILHVLCSATV-KGNVTKLG 366 Query 420 EKIMHFPTWVDLKGEDS----VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNT 475 + + + + VPD + +V V PK + L S H K+ + Sbjct 367 NVTLQNYKLISSGQKQTETTTVPDQLLQKIVIVPPKLRLVT--LAGSLTTITQKHYKEGS 424 Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 + ++ + Y V + + ++ L + D Sbjct 425 KSDVTRTIVFLSCSDSVDFHYEVFS-SHDGNHRGLV----GDTARLLTKGNSILPCFNDT 479 Query 536 KGHQFSCVCLHGDRKPHERKQNLERF------KKGDVRFLICTDVAARGIDIHGVPYVIN 589 C LHG R L+ F KG L CTDVA+RG+D+ V VI Sbjct 480 DDPNVICYKLHGSLSQQTRTATLKHFATNNDATKGKHLILFCTDVASRGLDLPHVSTVIE 539 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH-VCSSRGKGCYNTRLKED 646 + P ++++HRIGR RA G ++ + +E+ + + KG E Sbjct 540 MDPPFAVEDHLHRIGRTARAGCEGESLLFLLPGEEEGYMDYIKPYHPKGWKLLTYDEQ 597 Score = 75.2 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 40/103 (39%), Gaps = 5/103 (5%) Query 3 AFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPV 60 F G+ + + +M PT IQ IP L D+ + A+TGSGKT AF +P+ Sbjct 150 TFDSFGITDTMVSHLNVKMKISKPTKIQKLVIPPFLQAQNDLFIHAQTGSGKTLAFLLPI 209 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 Q + ++ + + + Y S A Sbjct 210 FQSILSLGQNIT---RQSGCFALVVTPTRELANQIYQVTSELA 249 >sp|A1CTL8|MAK5_ASPCL ATP-dependent RNA helicase mak5 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=mak5 PE=3 SV=1 Length=774 Score = 248 bits (633), Expect = 3e-70, Method: Composition-based stats. Identities = 95/440 (22%), Positives = 174/440 (40%), Gaps = 51/440 (12%) Query 263 DGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 + Y+ K++ + + + P ALI+ P+RELA Q +I + R L Sbjct 258 EHYLEKNRDGHGDIIGKKDKKDSTPIALILSPTRELAHQLAKHIGELVTQAPGVNARIAL 317 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQG 379 + GG++ + Q +L G DIV+GTPGR+ +++STG+ + +++FLV+DEAD LLS+G Sbjct 318 LTGGLSVQKQQRLLA-GADIVIGTPGRVWEIMSTGQGLIRKMQKIKFLVVDEADRLLSEG 376 Query 380 YSDFINRMHNQIPQV----------------TSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 + + + + +V + Q +V SAT H +KL+ K Sbjct 377 HFKEVEEIIGALDRVEDGDVLDEEDEAPEEESDPRSERQTLVFSATFHRDLQQKLAGKG- 435 Query 424 HFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 ++ D L ++L + + ++ N E Sbjct 436 ---------------KWTGGDIMNKKESMDYLLQKLNFREEKPKFIDTNPVSQMAENLKE 480 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 E + K + + H + ++F + + Q + Sbjct 481 GIVECGAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRR---------LAQLLQALQLPAL 531 Query 544 CLHGDRKPHERKQNLERFKKGDVR---FLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 LH R +++ERF LI TDVAARG+DI G+ VI+ P YV Sbjct 532 ALHSSMAQKARLRSVERFSSPTANPGTILIATDVAARGLDIKGIDLVIHYHAPRTADTYV 591 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HR GR RA G ++ + ++ + + N + + + +++ Sbjct 592 HRSGRTARAGASGKSVIICGPDEMVGVVRLAAKVHANMANGKRLPLESLEL---DRRVVG 648 Query 661 EIEEHLNCTISQVEPDIKVP 680 ++ ++ V+ +I Sbjct 649 RVKPRVSLASRIVDANIAKE 668 Score = 112 bits (279), Expect = 3e-24, Method: Composition-based stats. Identities = 40/160 (25%), Positives = 67/160 (42%), Gaps = 14/160 (9%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ + + E+ + +M + PT +QA IP IL G DV+ A TGSGKT AF IP+ Sbjct 197 VSAWDALNLSTELLTGISKMKFTSPTAVQAACIPHILDGHDVVGKASTGSGKTLAFGIPI 256 Query 61 IQIVYETLKD------QQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 ++ E +D ++ KK T I S + + G+ + Sbjct 257 LEHYLEKNRDGHGDIIGKKDKKDSTPIALILSPTRELAHQLAKHIGELVTQAPGVNARIA 316 Query 115 EVKEWHGCRATKGLMKGK--------HYYEVSCHDQGLCR 146 + + + L+ G +E+ QGL R Sbjct 317 LLTGGLSVQKQQRLLAGADIVIGTPGRVWEIMSTGQGLIR 356 >sp|Q9GZR7|DDX24_HUMAN ATP-dependent RNA helicase DDX24 OS=Homo sapiens OX=9606 GN=DDX24 PE=1 SV=1 Length=859 Score = 250 bits (637), Expect = 3e-70, Method: Composition-based stats. Identities = 96/436 (22%), Positives = 180/436 (41%), Gaps = 47/436 (11%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL 303 E+ ++ L K G + + +A P L++ P+RELA Q Sbjct 347 EKPVPKQNENEEENLDKEQTGNLKQELDDKSATCKAYPKRP--LLGLVLTPTRELAVQVK 404 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 +I ++ ++ +++GG++ + Q +L +IVV TPGRL +L+ +L Sbjct 405 QHIDAVARFTG---IKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRN 461 Query 364 VR---FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 +R LV+DEAD ++ +G+ ++++ + + + Q +V SATL V + Sbjct 462 LRQLRCLVVDEADRMVEKGHFAELSQLLEMLND-SQYNPKRQTLVFSATLT--LVHQAPA 518 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 +I+H H + K D L +++G + + N Sbjct 519 RILHK---------------KHTKKMDKTAKLDLLMQKIGMRG-KPKVIDLTRNEATVET 562 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 E K Y + ++ ++++F + L P Sbjct 563 LTETKIHCETDEKDFYLYYFLMQYP-GRSLVFANSISCIKRLSGLLKVLDIMP------- 614 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 + LH +R +NLE+F + + L+ TDVAARG+DI V +VI+ +P + YV Sbjct 615 --LTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYV 672 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HR GR RA GL++ L+ E + + + LK+D ++ + + + Sbjct 673 HRSGRTARATNEGLSLMLIGPEDVINFKKIYKT---------LKKDEDIPLFPVQTKYMD 723 Query 661 EIEEHLNCTISQVEPD 676 ++E + Q+E Sbjct 724 VVKERIRLA-RQIEKS 738 Score = 89.4 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIP 59 ++A+ ++ V + +A+ + + PT IQA ++ P I D+L AAETGSGKT AF+IP Sbjct 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 250 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGAS 86 +I V + K T G + Sbjct 251 MIHAVLQWQKRNAAPPPSNTEAPPGET 277 >sp|Q09775|ROK1_SCHPO ATP-dependent RNA helicase rok1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rok1 PE=3 SV=1 Length=481 Score = 241 bits (614), Expect = 3e-70, Method: Composition-based stats. Identities = 85/389 (22%), Positives = 150/389 (39%), Gaps = 59/389 (15%) Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 K +A + G + ++ +P +A+IV P+REL EQ ++ Sbjct 83 KRDLLACAPTGSGKTIAYLFPILQKLQL--HVPGGYRAIIVAPTRELCEQIYRQAEKLSF 140 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 + L +++ L D+ +GTP RL + TG L+ +V F V+DE Sbjct 141 GTSLKIIE--LSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQTG-LSFEKVEFFVMDE 197 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD L G+ + + + + + + SAT+ S V++L++ + P + + Sbjct 198 ADRLFEPGFIEQTDHILSAC-----TSSNICKSLFSATIPSR-VEELAKVVTVDPIRIIV 251 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 +D+ D++ ++ V T ++ Sbjct 252 GLKDAATDSIDQRLLFVGSDTSKIVILRQM------------------------------ 281 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 + +IF + L + + +HG+ Sbjct 282 --------ISNGELKPRVVIFVQDIERAKALYTELL---------FDEIHVGVIHGELPQ 324 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 +R++ L +F+KG++ LI TD+ ARGID HGV VIN P +Y+HRIGR GRA Sbjct 325 AKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGN 384 Query 612 MGLAISLVATEKEKVWYHVCS-SRGKGCY 639 G A++ E + + R GC Sbjct 385 TGQAVTFFTKEDGEYIKLIAGVMRSSGCE 413 Score = 72.5 bits (176), Expect = 5e-12, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 8/94 (9%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 + + +++ + T IQ +IP I D+L A TGSGKT A+ P++Q + + Sbjct 57 LCENLKKQNITECTTIQRYAIPTIGSKRDLLACAPTGSGKTIAYLFPILQKLQLHV---- 112 Query 73 EGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + + Y + + G+ Sbjct 113 ----PGGYRAIIVAPTRELCEQIYRQAEKLSFGT 142 >sp|Q1E9T9|DBP7_COCIM ATP-dependent RNA helicase DBP7 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP7 PE=3 SV=1 Length=769 Score = 248 bits (632), Expect = 3e-70, Method: Composition-based stats. Identities = 98/511 (19%), Positives = 178/511 (35%), Gaps = 93/511 (18%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP----DGYIV 267 P + F + L + + K P ++++ D ++ Sbjct 141 EPAKPSNAPLVDGIDTFTSLGLSPSLATHLLTKLNLKTPTAIQKSSITQLLKEECDAFVQ 200 Query 268 KSQHSGNAQVTQTKFL-----------------------PNAPKALIVEPSRELAEQTLN 304 SG + + A+++ P+REL +Q Sbjct 201 AQTGSGKTLAYLLPIVERLMRISSHNKGKKDSEGNTVHRDSGLFAIVLAPTRELCKQISV 260 Query 305 NIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQ 363 + + + +IGG + + + L G++I+V TPGRL D + +T L++S Sbjct 261 VLDGLLRC--AHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTKVLDVSN 318 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK------RLQVIVCSATLHSFDVKK 417 VR+LVLDE D L+ G+ + I + ++ + K + I+CSATL +V++ Sbjct 319 VRWLVLDEGDRLMDLGFEEEIQGIIKKLDERRRPSKIPDLPAKRTTILCSATL-KMNVQR 377 Query 418 LSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 L GE S+ + +H P + + + + Sbjct 378 L--------------GEISLKEAIHIKADPADEDDE-------QKDGSKQPEFSAPAQLK 416 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ-------- 529 + + + L ++ + +AIIF D + F ++ Sbjct 417 QSYAVVAAKLRLVTLTALLKRTFARKGSVMKAIIFVSCADSVDFHFEVFTRRESSEELPD 476 Query 530 ------------------GGGPDKKGHQFSCVCLHGDRKPHERKQNLERF-KKGDVRFLI 570 + LHG H R L F K+ D LI Sbjct 477 ADDENAPSSSNVHGSIATASAFSNPSNNVILHKLHGSLPQHVRTATLSAFAKQKDASVLI 536 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 CTDVAARG+D+ V +VI +++HRIGR R R G A+ + E+ + + Sbjct 537 CTDVAARGLDLPNVDFVIEYDPAFCSDDHLHRIGRTARLGRDGRALIFLLPGNEEGYVDI 596 Query 631 CSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 +E ++ NE+ + + Sbjct 597 LKG--------SYREGSSNSVTRNEVNEILK 619 Score = 74.0 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 24/78 (31%), Positives = 44/78 (56%), Gaps = 3/78 (4%) Query 1 MAAFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSI 58 + F+ +G+ P +A + +++ PT IQ SI +L D + A+TGSGKT A+ + Sbjct 154 IDTFTSLGLSPSLATHLLTKLNLKTPTAIQKSSITQLLKEECDAFVQAQTGSGKTLAYLL 213 Query 59 PVIQIVYETLKDQQEGKK 76 P+++ + + +GKK Sbjct 214 PIVERLMR-ISSHNKGKK 230 >sp|Q6FML5|PRP5_CANGA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=PRP5 PE=3 SV=1 Length=816 Score = 248 bits (634), Expect = 3e-70, Method: Composition-based stats. Identities = 99/429 (23%), Positives = 164/429 (38%), Gaps = 67/429 (16%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA---PKALIVEPSRELAEQTL 303 + +SK G + V K L N P A+I P+RELA Q Sbjct 284 PAIMSGRDVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQIN 343 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK---LN 360 +++ I + + + GG + Q+ L+ GV+I + TPGR DL+S ++ Sbjct 344 EEVQKL---ISDLDISSICCTGGSDLKKQIDKLKTGVEIAIATPGRFIDLLSLNGGNLVS 400 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 ++ F+V+DEAD L G+ I + + Q ++ SAT S V + Sbjct 401 TLRISFVVMDEADRLFDFGFEPQIASVLRTV------RPDRQCVLFSATFPS-KVSNFAS 453 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 + + P + + E V + ++ + ++D+ E L + Sbjct 454 RFLDSPLQITVNAEGMVNERINQKFTICSDESDKFKELLSLLKV---------------- 497 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 E ++ IIF ++ CD +E+ Sbjct 498 -------------------FNSETVDEKTIIFVSSQQICDIIEKRLTDYSE--------- 529 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 +H R +ER+QNLE FKK L+CT+V +RG+++ V VI YV Sbjct 530 KLYSIHAGRPYNERRQNLELFKKTSNSILLCTEVMSRGLNVPEVSRVILYNSAKTFAQYV 589 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSS-RGKGCYNTRLKEDGGCTIWYNEMQLL 659 H GR R R G +ISL+ + Y + + R K +KE N Q+ Sbjct 590 HSTGRTARGTREGTSISLLLPNELSSAYILNKAMRDKDFSECPVKEVK------NLKQMA 643 Query 660 SEIEEHLNC 668 + E+ L Sbjct 644 QKFEDGLKS 652 Score = 96.0 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 32/147 (22%), Positives = 69/147 (47%), Gaps = 15/147 (10%) Query 1 MAAFSEMGVMPEIAQAVEEM-DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +S++G+ +I + ++++ + T IQ ++IP I+ G DV+ ++TGSGKT ++ +P Sbjct 250 VTKWSQLGIPYDIIRFIKDVFSYKSLTPIQTQTIPAIMSGRDVIGISKTGSGKTISYLLP 309 Query 60 VIQIVYETLKDQQEGKKGKT-TIKTGASVLNKWQMNPYDRGSAFAIGSD--GLCCQSREV 116 +I+ V K Q++ + G+T I + + + + D +CC Sbjct 310 MIRHV----KAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKLISDLDISSICCTGGSD 365 Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQG 143 + + G+ E++ G Sbjct 366 LKKQIDKLKTGV-------EIAIATPG 385 >sp|Q59S50|DBP7_CANAL ATP-dependent RNA helicase DBP7 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP7 PE=3 SV=1 Length=727 Score = 246 bits (629), Expect = 4e-70, Method: Composition-based stats. Identities = 101/455 (22%), Positives = 174/455 (38%), Gaps = 58/455 (13%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL-------------SKAPDGYIVK 268 MK+ F L F P K + + ++ G + Sbjct 131 MKDATNFSGLGLNEKLSIHLTDHLRFMHPTKIQQLVIPSLISTENDLFVKAQTGSGKTLA 190 Query 269 SQHSGNAQVTQ-TKFLPN---APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 ++ + KF N A+I+ P+RELA Q ++ + + + ++I Sbjct 191 FVLPIFHKLMRENKFKINRESGLFAIILTPTRELATQIYGVLETLTRC--HHWIVPGIVI 248 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + + + L G +I+V TPGRL D + +T L++SQ+R+LVLDE D L+ G+ D Sbjct 249 GGEKKKSEKARLRKGCNILVATPGRLADHLENTKTLDISQLRWLVLDEGDKLMELGFEDT 308 Query 384 INRMHNQIP---QVTSDGKRLQ-------VIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 I ++ +I ++ ++ Q ++CSATLHS +VKKL ++ P + ++ Sbjct 309 IAQITAKIDSNSKIADTAEKWQGLPSRRINMLCSATLHS-NVKKLGSIVLKDPEMISVET 367 Query 434 ----------------EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 + PD + VV V PK + I Sbjct 368 ASVAGTVSFDETIATTTSTAPDQLIQNVVVVPPKLRLVTLDALLLKISKHSAERTIVFFS 427 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 ++S + + ++ +E + ++ + D L + Sbjct 428 CSDSVDFHFDVFTRDGKKFKKVTDEETGEVKTVLVSPEDDENDGL--------LTAPQLS 479 Query 538 HQFSCVCLHGDRKPHERKQNLERF---KKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 LHG R L+ F + L CTDVA+RG+D+ V VI P Sbjct 480 DNTIIYKLHGSLSQQTRASTLQSFVKDNNSYNKILFCTDVASRGLDLPNVANVIEYDPPF 539 Query 595 EKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 +++HRIGR R G A + E+ + Sbjct 540 TIDDHLHRIGRSARLGNEGNATLFLLPGIEEGYVD 574 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 24/97 (25%), Positives = 46/97 (47%), Gaps = 4/97 (4%) Query 2 AAFSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIP 59 FS +G+ +++ + + + ++ PT IQ IP ++ D+ + A+TGSGKT AF +P Sbjct 135 TNFSGLGLNEKLSIHLTDHLRFMHPTKIQQLVIPSLISTENDLFVKAQTGSGKTLAFVLP 194 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + K + + G I + + Y Sbjct 195 IFHKLMRENKFKINRESGLFAI--ILTPTRELATQIY 229 >sp|Q9FFT9|RH32_ARATH DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana OX=3702 GN=RH32 PE=2 SV=1 Length=739 Score = 247 bits (630), Expect = 4e-70, Method: Composition-based stats. Identities = 96/454 (21%), Positives = 174/454 (38%), Gaps = 79/454 (17%) Query 192 IGCYLDIDKGHVKF----SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEF 247 IG D G V + L ++ + +K+ +++A + Sbjct 52 IGKSEDGKNGTVFSRYAGVRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHAL----- 106 Query 248 KFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNI 306 + ++ G + ++ + ++ P + +I+ P+RELA QT + Sbjct 107 ---CGRDILGAARTGSGKTLAFVIPILEKLHRERWSPEDGVGCIIISPTRELAAQTFGVL 163 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQVR 365 + K+ K L+IGG D + ++I+V PGRL + T Q++ Sbjct 164 NKVGKF---HKFSAGLLIGGREGVDVEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQ 220 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 L+LDEAD +L + ++ + +Q+P K Q ++ SAT + VK L+ + Sbjct 221 ILILDEADRVLDSAFKGQLDPIISQLP------KHRQTLLFSAT-QTKKVKDLARLSLRD 273 Query 426 PTWVDLKGE--DSVPDTVHHVV--VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 P ++ + E + P ++ V VPV K D LW Sbjct 274 PEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWS------------------------ 309 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 IK H + ++F TK + + F + G Sbjct 310 ------------------FIKTHLNSRILVFLSTKKQVKFVHEAFNKLRPG-------IP 344 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI-HGVPYVINVTLPDEKQNYV 600 LHG +R +F + L CTDV ARG+D V +V+ V P++ +Y+ Sbjct 345 LKSLHGKMSQEKRMGVYSQFIE-RQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYI 403 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 HR+GR R G ++ + +EK+ + ++ Sbjct 404 HRVGRTARFYTQGKSLLFLTPSEEKMIEKLQEAK 437 Score = 97.1 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 8/118 (7%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F+++ + + + +++ ++ TD+Q+ +IP L G D+L AA TGSGKT AF IP+ Sbjct 70 VRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPI 129 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY---DRGSAFAIGSDGLCCQSRE 115 ++ ++ ++G S + + ++ F S GL RE Sbjct 130 LEKLHRERWSPEDG-----VGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGRE 182 >sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus OX=10090 GN=Ddx52 PE=2 SV=2 Length=598 Score = 243 bits (621), Expect = 4e-70, Method: Composition-based stats. Identities = 90/443 (20%), Positives = 163/443 (37%), Gaps = 67/443 (15%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 D+ F + ++ + + ++ + ++ + G Sbjct 156 DLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAIPVML----------HGRE 205 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 L+ AP G S + + +AL++ P+RELA Q + + + Sbjct 206 LLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALVISPTRELASQIHRELIKIS---EGT 262 Query 317 KLRELLI-IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFLVLDEAD 373 R +I +AA+ DI+V TP RL L+ ++L+ V +LV+DE+D Sbjct 263 GFRIHMIHKAAIAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTNVEWLVVDESD 322 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 L G + F ++ + TS R + SAT +DV++ + + V + Sbjct 323 KLFEDGKTGFREQLASIFLACTSPKVRR--AMFSATFA-YDVEQWCKLNLDNVVSVSIGA 379 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 +S +TV ++ V +T +L Sbjct 380 RNSAVETVEQELLFVGSETGKLLA------------------------------------ 403 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +K+ ++F ++ L I +G + +H +R + Sbjct 404 ---MRELVKKGFKPPVLVFVQSIERAKELFHELIYEG---------INVDVIHAERTQQQ 451 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F+ G + LICT + ARGID GV VIN P Y+HRIGR GRA G Sbjct 452 RDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNRG 511 Query 614 LAISLVATEKEKVWYHVCSSRGK 636 A++ + + + V + + Sbjct 512 KAVTFFTEDDKPLLRSVANVIQQ 534 Score = 94.8 bits (234), Expect = 7e-19, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 54/111 (49%), Gaps = 12/111 (11%) Query 1 MAAFSEMG----VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 +A F ++ + + Q + + + +PT IQ ++IP++L G ++L +A TGSGKT AF Sbjct 161 IATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAF 220 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 SIP++ + +Q KG + S + + + G+ Sbjct 221 SIPILMQL------KQPTNKGFRAL--VISPTRELASQIHRELIKISEGTG 263 >sp|Q5RDL2|DDX24_PONAB ATP-dependent RNA helicase DDX24 OS=Pongo abelii OX=9601 GN=DDX24 PE=2 SV=1 Length=859 Score = 249 bits (635), Expect = 6e-70, Method: Composition-based stats. Identities = 98/437 (22%), Positives = 182/437 (42%), Gaps = 49/437 (11%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK-ALIVEPSRELAEQT 302 E+ ++ L K G + + +A K P P L++ P+RELA Q Sbjct 347 EKPVPKQNENEEENLDKEQTGNLKQELDDKSAT---CKTYPKRPLLGLVLTPTRELAVQV 403 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS 362 +I ++ ++ +++GG++ + Q +L +IVV TPGRL +L+ +L Sbjct 404 KQHIDAVARFTG---IKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLR 460 Query 363 QVR---FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 +R LV+DEAD ++ +G+ ++++ + + + Q +V SATL V + Sbjct 461 NLRQLRCLVVDEADRMVEKGHFAELSQLLEMLND-SQYNPKRQTLVFSATLT--LVHQAP 517 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 +I+H H + K D L +++G + + N Sbjct 518 ARILHK---------------KHTKKMDKTAKLDLLMQKIGMRG-KPKVIDLTRNEATVE 561 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 E K Y + ++ ++++F + L P Sbjct 562 TLTETKIHCETDEKDFYLYYFLMQYP-GRSLVFANSISCIKRLSGLLKVLDIMP------ 614 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 + LH +R +NLE+F + + L+ TDVAARG+DI V +VI+ +P + Y Sbjct 615 ---LTLHACMHQKQRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIY 671 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 VHR GR RA GL++ L+ E + + + LK+D ++ + + + Sbjct 672 VHRSGRTARATNEGLSLMLIGPEDVINFKKIYKT---------LKKDEDIPLFPVQTKYM 722 Query 660 SEIEEHLNCTISQVEPD 676 ++E + Q+E Sbjct 723 DVVKERIRLA-RQIEKS 738 Score = 87.5 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 46/87 (53%), Gaps = 1/87 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIP 59 ++A+ ++ V + +A+ + + PT IQ ++ P I D+L AAETGSGKT AF+IP Sbjct 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTLAPAIRDKLDILGAAETGSGKTLAFAIP 250 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGAS 86 +I V + K T G + Sbjct 251 MIHAVLQWQKRNAAPPPSNTEAPPGET 277 >sp|Q9ESV0|DDX24_MOUSE ATP-dependent RNA helicase DDX24 OS=Mus musculus OX=10090 GN=Ddx24 PE=1 SV=2 Length=857 Score = 248 bits (634), Expect = 6e-70, Method: Composition-based stats. Identities = 98/441 (22%), Positives = 178/441 (40%), Gaps = 49/441 (11%) Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK-ALIVEPSRE 297 + E+ +DG G + + Q+ K P P L++ P+RE Sbjct 342 PSSLEEKPVPKQNEDGEEKFDAEQAGKL---KQELCDQIAIYKVHPRRPLLGLVLTPTRE 398 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG 357 LA Q +I K+ + +++GG++ + Q +L +IV+ TPGRL +LV Sbjct 399 LAIQVRQHIDAVAKFTG---INTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEK 455 Query 358 KLNLSQVR---FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD 414 +LS +R LV+DEAD ++ +G+ ++++ + + Q +V SATL Sbjct 456 HPHLSNLRQLRCLVIDEADRMVEKGHFAELSQLLEMLND-SQYNPSRQTLVFSATLT--L 512 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 V + +I+H + D K D L +++G + + N Sbjct 513 VHQAPARILHKKHVKKMDKTD---------------KLDLLMQKVGMRG-KPKVIDLTRN 556 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 E K Y + ++ ++++F + L P Sbjct 557 EGTVETLTETKIHCETDEKDLYLYYFLMQYP-GRSLVFANSISCIKRLSGLLKVLDVMP- 614 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 + LH +R +NLE+F + L+ TDVAARG+DI V +VI+ +P Sbjct 615 --------LTLHACMHQKQRLRNLEQFARLQDCVLLATDVAARGLDIPKVQHVIHYQVPR 666 Query 595 EKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 + Y+HR GR RA GL++ L+ E + + + K D ++ Sbjct 667 TSEIYIHRSGRTARAASEGLSLMLIGPEDVINFKKIYKTLQK---------DEDIPLFPV 717 Query 655 EMQLLSEIEEHLNCTISQVEP 675 + + + ++E + Q+E Sbjct 718 QSKYMDVVKERIRLA-RQIEK 737 >sp|A5D7C1|DDX52_BOVIN Probable ATP-dependent RNA helicase DDX52 OS=Bos taurus OX=9913 GN=DDX52 PE=2 SV=1 Length=596 Score = 243 bits (619), Expect = 8e-70, Method: Composition-based stats. Identities = 101/505 (20%), Positives = 182/505 (36%), Gaps = 70/505 (14%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 D+ F + ++ + + ++ + ++ + G Sbjct 153 DLPDPIATFQQLDQEYKINSRLLQNILDAGFQTPTPIQMQAIPVML----------HGRE 202 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 L+ AP G S + + +ALI+ P+RELA Q + + + Sbjct 203 LLASAPTGSGKTLAFSIPILMHLKQPTNKGFRALIISPTRELASQIHRELVKLS---EGT 259 Query 317 KLRELLI-IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFLVLDEAD 373 R +I VAA+ DI+V TP RL L+ ++L+ V +LV+DE+D Sbjct 260 GFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLLKQDPPGIDLTSVEWLVVDESD 319 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 L G + F +++ + TS + + SAT +DV++ + V + Sbjct 320 KLFEDGKTGFRDQLASIFLACTSHKVKR--AMFSATFA-YDVEQWCRLNLDSVITVSVGA 376 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 +S +TV ++ V +T +L Sbjct 377 RNSAVETVEQELLFVGSETGKLLA------------------------------------ 400 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +K+ ++F ++ L I +G + +H DR + Sbjct 401 ---MRELVKKGFNPPVLVFVQSIERAKELFHELIYEG---------INVDVIHADRTQQQ 448 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 R + F+ G + LICT + ARGID GV VIN P Y+HRIGR GRA G Sbjct 449 RDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGHKG 508 Query 614 LAISLVATEKEKVWYHVCSSRGK-GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 A++ + + + V + + GC + + + +++ + E +IS Sbjct 509 KAVTFFTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLLSKQKKKMIKKPLER--ESIST 566 Query 673 VEPDIKVPVDEFDGKVTYGQKRAAG 697 + KVT K+ Sbjct 567 TPKYFLEKAKDKRKKVTGQNKKKVA 591 Score = 97.5 bits (241), Expect = 9e-20, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 53/111 (48%), Gaps = 12/111 (11%) Query 1 MAAFSEMG----VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 +A F ++ + + Q + + + PT IQ ++IP++L G ++L +A TGSGKT AF Sbjct 158 IATFQQLDQEYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAF 217 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 SIP++ + +Q KG + S + + + G+ Sbjct 218 SIPILMHL------KQPTNKGFRAL--IISPTRELASQIHRELVKLSEGTG 260 >sp|Q6FY67|MAK5_CANGA ATP-dependent RNA helicase MAK5 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=MAK5 PE=3 SV=1 Length=733 Score = 246 bits (627), Expect = 8e-70, Method: Composition-based stats. Identities = 96/457 (21%), Positives = 180/457 (39%), Gaps = 57/457 (12%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-----------NAPKAL 290 F +++ A +G + + S + T +P + Sbjct 170 LSNLGFTEMTPIQKLSIPAALEGKDIMGKASTGSGKTLAYGIPIIEKMIKSKDNLRTNGI 229 Query 291 IVEPSRELAEQTLNNIKQFKK-YIDNPKLRELLIIGGVAARDQLSVLE--NGVDIVVGTP 347 I P+RELA+Q +++ + L + GG++ + Q +L+ IVV TP Sbjct 230 IFTPTRELAQQVTKHLQNVCSMLLKKNPYMILSLTGGLSIQKQERLLKYDGSARIVVATP 289 Query 348 GRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR---L 401 GR +L+ + +++ LVLDEAD LL G+ D ++ + ++ K Sbjct 290 GRFLELIEKNEELMKRFAKIDVLVLDEADRLLQDGHFDEFEKILKHLGRIRKSLKNMEYW 349 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 Q ++ SAT + KL+ + K E + + H++ +N K+ + Sbjct 350 QTLIYSATFSTDLFDKLANSSWKKKN--NSKDESEMESVLKHLMTKINFKSKPMM----- 402 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + A + A E E + + Y + + +IFC + Sbjct 403 -------IDANPEDKISAQIKESLIECAPLERDLYCYYFVTLYP-GTTLIFCNSIESVKK 454 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK--------GDVRFLICTD 573 L Y I G + +H R +NLE+F+ G LI +D Sbjct 455 LNAYLINLG---------INSFQIHSSMTQKNRLKNLEKFEAMASKNNHLGKPTVLIASD 505 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE----KVWYH 629 VAARG+DI G+ +V++ LP Y+HR GR R + G+A+ + + ++ + Sbjct 506 VAARGLDIKGIKHVVHYHLPHSADTYIHRSGRTARGDNEGVAVMICSPQEAMGPLRKLRR 565 Query 630 VCSSRGKGCYNTR-LKEDGGCTIWYNEMQLLSEIEEH 665 + +S+ + +T+ K + E+ +L ++ E Sbjct 566 LLASKEQISKSTKNKKWQQTVPLLPIEIDILQQLRER 602 Score = 89.0 bits (219), Expect = 6e-17, Method: Composition-based stats. Identities = 24/94 (26%), Positives = 44/94 (47%), Gaps = 2/94 (2%) Query 1 MAAFSE-MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + +++ + + + + + T IQ SIP L G D++ A TGSGKT A+ IP Sbjct 153 LPGWTDTVDLSMTTINGLSNLGFTEMTPIQKLSIPAALEGKDIMGKASTGSGKTLAYGIP 212 Query 60 VIQIVYETLKD-QQEGKKGKTTIKTGASVLNKWQ 92 +I+ + ++ + + G T + V Q Sbjct 213 IIEKMIKSKDNLRTNGIIFTPTRELAQQVTKHLQ 246 >sp|Q8TFL3|DBP7_CANGA ATP-dependent RNA helicase DBP7 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP7 PE=3 SV=1 Length=715 Score = 245 bits (625), Expect = 1e-69, Method: Composition-based stats. Identities = 106/551 (19%), Positives = 197/551 (36%), Gaps = 55/551 (10%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG------YIVKSQHSGNAQVTQTK 281 F + + + + + V + + +I SG Sbjct 127 FEGLGVGSLVVSHLENKMRIQKSTSIQKVVIPQILQNADKTDFFIHAQTGSGKTLAYLLP 186 Query 282 F------------LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + ALI+ P+RELA Q + L L+IGG Sbjct 187 IFSAILGMGDHIDRKSGCFALIIAPTRELASQIYHVTTMLANCC--HYLVPCLLIGGERK 244 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKL----NLSQVRFLVLDEADGLLSQGYSDFIN 385 + + + L G + ++GTPGR+ D K+ S +R++VLDE D L+ G+ + IN Sbjct 245 KSEKARLRKGCNFIIGTPGRILDHFQNTKVIKEQMQSSLRYVVLDEGDKLMELGFEETIN 304 Query 386 RMHNQIP-------QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--- 435 ++ + + R+ ++CSAT + +V KLS++ + + + G+ Sbjct 305 QIMEIVNSMDVITRKYPKLPNRIVHLLCSAT-KNNEVAKLSKRSLDNYKVISIGGKKDTM 363 Query 436 ----SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 SVPD + VV PK + I+ + A + Sbjct 364 MDNTSVPDQLLQKVVIAPPKLRLITLAGVLDGIQKKPLDAGSVAKRTIVFLSCADSVDYH 423 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 + + ++ + L + D++ C LHG Sbjct 424 FEVFSGNDGLYKNLVG---------DSVRVLSKGNKILPSIKDEELPGIICYKLHGSLSQ 474 Query 552 HERKQNLERF------KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 R L+ F KG L CTDVA+RG+D+ V VI P ++++HRIGR Sbjct 475 QMRTMTLKHFATDSEQTKGKHLILFCTDVASRGLDLPDVSTVIEFDPPFAVEDHLHRIGR 534 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 RA R G A+ + +E+ + ++ E +N++ ++ ++ Sbjct 535 TARAGRSGEALLFLLPGEEEGYLDYIQKYHPKGWDLLDAEKDVLIKAFNDID-VARNDKE 593 Query 666 LNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTS 725 + T E D + + + + KG++ + ++A ++ Sbjct 594 IKSTGKTFEWDTNATTWHLNVERRILENEQFKEQATKGYISHVRAYATHISAEKQYFNLK 653 Query 726 FLHLGYLPNQL 736 +HLG+L Sbjct 654 GVHLGHLAKSF 664 Score = 65.2 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 26/98 (27%), Positives = 42/98 (43%), Gaps = 7/98 (7%) Query 3 AFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGG---GDVLMAAETGSGKTGAFSI 58 +F +GV + +E +M T IQ IP IL D + A+TGSGKT A+ + Sbjct 126 SFEGLGVGSLVVSHLENKMRIQKSTSIQKVVIPQILQNADKTDFFIHAQTGSGKTLAYLL 185 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 P+ + + D + K G + + + Y Sbjct 186 PIFSAIL-GMGDHIDRKSGCFAL--IIAPTRELASQIY 220 >sp|Q94C75|RH25_ARATH DEAD-box ATP-dependent RNA helicase 25 OS=Arabidopsis thaliana OX=3702 GN=RH25 PE=2 SV=2 Length=563 Score = 241 bits (615), Expect = 2e-69, Method: Composition-based stats. Identities = 97/457 (21%), Positives = 169/457 (37%), Gaps = 68/457 (15%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 L+ +++ V++ A L +A +K G V Sbjct 84 QFPLSPLTLKGIEDAGFKTMTVVQEATLPLIL--------QGKDILAKAKTGTGKTVAFL 135 Query 271 HS-----GNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 A L+V P+RELA Q KY +P + ++IG Sbjct 136 LPSIEAVIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKY--HPSIGVQVVIG 193 Query 326 GVAAR-DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYS 381 G +Q + ++ I+V TPGRL D + L V+ LVLDEAD LL G+ Sbjct 194 GTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFR 253 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I R+ +P K+ Q + SAT+ S +V+++ V LK + + V Sbjct 254 REIERIIAAVP------KQRQTFLFSATV-SDEVRQIC--------HVALKRDHEFVNCV 298 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + K +++ A+ +S +LK I Sbjct 299 QEGAGETHQKVSQMY--------------------MIASLDRHFSLLYGLLKKH-----I 333 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 ++ + IIFC T + + + + +H + R + + F Sbjct 334 TDNVGYKVIIFCTTAMVTRLVADLLGKL---------SLNVREIHSRKPQSYRTRVSDEF 384 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 +K L+ +DV+ARG+D V V+ + LP +++ Y+HR+GR GR + G + L+A Sbjct 385 RKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAP 444 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 +E V + + + +Q+ Sbjct 445 WEEYFLSSVKDLPITKSSLPPIDHEAVKKVQKGLIQV 481 Score = 99.0 bits (245), Expect = 3e-20, Method: Composition-based stats. Identities = 23/101 (23%), Positives = 44/101 (44%), Gaps = 1/101 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P + +E+ + T +Q ++PLIL G D+L A+TG+GKT AF +P I Sbjct 80 TRFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSI 139 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + V + ++ + + + + Sbjct 140 EAVIKAPPASRDNRHPPIIV-LVVCPTRELACQAAAEANIL 179 >sp|A5DAR2|DBP7_PICGU ATP-dependent RNA helicase DBP7 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP7 PE=3 SV=3 Length=747 Score = 245 bits (626), Expect = 2e-69, Method: Composition-based stats. Identities = 95/463 (21%), Positives = 176/463 (38%), Gaps = 59/463 (13%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL-------------SKAPDGYIVK 268 MK F L + + FK P + + ++ G + Sbjct 131 MKGADDFNGLGLNDNLVHHLTESLRFKNPTQIQKSVIPSLLSTSRDLFVKAQTGSGKTLS 190 Query 269 SQHSGNAQVTQTKFLP----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 ++ Q K P + A+++ P+RELA Q ++ + + ++ ++I Sbjct 191 FLLPILHKLMQEKKNPITRESGVFAIVLVPTRELANQIYGVLETLTRC--HHQIVPGIVI 248 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + + + + GV+I+V TPGRL D + +T L+LSQ+R+L+LDE D L+ G+ + Sbjct 249 GGEKKKSEKARIRKGVNILVATPGRLADHIENTTSLDLSQLRYLILDEGDRLIDLGFEET 308 Query 384 ----------INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 +R+ + + ++CSAT+ +V+KL I++ P + + Sbjct 309 ITKITDTITRCSRISESTQKWQGLPTKRVNVLCSATM-ENNVEKLGSIILNNPEQISIDT 367 Query 434 EDS-----------VPDTVHHVVVPVNPKTD------RLWERLGKSHIRTDDVHAKDNTR 476 S P + VV V K L E + + ++ Sbjct 368 SKSREGDEIDSKSMAPAQLTQRVVVVPAKLRLVTLSAVLKEVAKTAPTSSTEIVRTIVFF 427 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 ++S EA K E+ E + + + + + + + P Sbjct 428 SCSDSVNFHYEAFKRNGSEFRKARNAETNRFEMVTVGEDEANAEGSDTEIPKISSAPTIS 487 Query 537 GHQFSCVCLHGDRKPHERKQNLERF----------KKGDVRFLICTDVAARGIDIHGVPY 586 + LHG R L+ F + L+CTDVA+RG+D+ + Sbjct 488 ANSV-VYKLHGSLTQQVRTSTLQSFVQAVPFDNSENNYNHLILLCTDVASRGLDLPNISS 546 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 V+ P Q+++HRIGR R G + + E+ + Sbjct 547 VVEYDPPFSVQDHLHRIGRTARLGNKGSSYLFLLPGIEEGYVD 589 Score = 82.1 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 7/130 (5%) Query 4 FSEMGVMPEIAQAVEE-MDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVI 61 F+ +G+ + + E + + PT IQ IP +L D+ + A+TGSGKT +F +P++ Sbjct 137 FNGLGLNDNLVHHLTESLRFKNPTQIQKSVIPSLLSTSRDLFVKAQTGSGKTLSFLLPIL 196 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ---SREVKE 118 + + K+ + G I + Y + E K+ Sbjct 197 HKLMQEKKNPITRESGVFAI--VLVPTRELANQIYGVLETLTRCHHQIVPGIVIGGEKKK 254 Query 119 WHGCRATKGL 128 R KG+ Sbjct 255 SEKARIRKGV 264 >sp|Q0D622|RH32_ORYSJ DEAD-box ATP-dependent RNA helicase 32 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0517000 PE=2 SV=2 Length=773 Score = 245 bits (626), Expect = 2e-69, Method: Composition-based stats. Identities = 89/430 (21%), Positives = 172/430 (40%), Gaps = 71/430 (17%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L L+ + ++ ++ A L + +K G + Sbjct 85 LPLSNKTKDGLRKAGYTEMSEIQRAALPHAL--------CGRDVLGAAKTGSGKTLAFVI 136 Query 272 SGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR 330 ++ + ++ P + +++ P+++LA Q N ++ K I+G Sbjct 137 PVLEKLYRERWGPEDGVGCIVLSPNKDLAGQIFNVFQKVGKL---HGFSAACIVGNRKGL 193 Query 331 DQLSVLENGVDIVVGTPGRLD-DLVSTGKLNLSQV-RFLVLDEADGLLSQGYSDFINRMH 388 D+ + N ++I+V TPGRL + T + SQ+ + LV+DEAD +L + + + ++ + Sbjct 194 DEEKAVINNMNILVCTPGRLLQHMGETTNFDCSQIQQILVIDEADQVLDKNFQEQVDNVV 253 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS--VPDTVHHVVV 446 +Q+P+V Q ++ SAT + VK L+ + P ++ + E + PDT+ + Sbjct 254 SQLPKV------RQTLLFSAT-QTKSVKDLARVSLKDPEYISVHEEATTATPDTLEQYAM 306 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 V + K IK H Sbjct 307 IVPLEQ----------------------------------------KLNMLWSFIKRHLK 326 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + ++F + + + F + G S C+HG K ++ + FK+G Sbjct 327 SRILVFLSSVKQVKFVYEVFKKLRPG-------ISLRCMHGRMKYEVQQAIVAEFKEGHS 379 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 L TD+ ARG+DI V +V+ V P+ Y+HR+GR R + G A+ + E+EK+ Sbjct 380 -VLFSTDIFARGLDIEDVDWVVQVDCPENIALYIHRVGRTARYNKRGKALIFLCPEEEKM 438 Query 627 WYHVCSSRGK 636 + ++ K Sbjct 439 LEKLKAAESK 448 Score = 94.0 bits (232), Expect = 2e-18, Method: Composition-based stats. Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 0/67 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F E+ + + + + + ++IQ ++P L G DVL AA+TGSGKT AF IPV+ Sbjct 80 ARFDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVL 139 Query 62 QIVYETL 68 + +Y Sbjct 140 EKLYRER 146 >sp|Q5ZBH5|RH25_ORYSJ DEAD-box ATP-dependent RNA helicase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0618400 PE=2 SV=1 Length=594 Score = 241 bits (615), Expect = 3e-69, Method: Composition-based stats. Identities = 95/409 (23%), Positives = 160/409 (39%), Gaps = 75/409 (18%) Query 243 GEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN------AQVTQTKFLPNAPK-------- 288 G E + + + D +G + LPN+ + Sbjct 145 GYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRPSIN 204 Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA-RDQLSVLENGVDIVVGTP 347 L++ P+RELA Q K+ KY + L ++IGG ++Q S+ N I+V TP Sbjct 205 LLVMCPTRELAIQVAVEAKKLLKY--HRSLGVQVVIGGTRLTQEQRSMQANPCQILVATP 262 Query 348 GRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GRL D V L V+ LVLDEAD LL G+ I R+ +P K Q + Sbjct 263 GRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDIERIIASVP------KERQTL 316 Query 405 VCSATLHSFDVKKLSEKIM-HFPTWVDL--KGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT+ +V+++S M +++ G++ V + + Sbjct 317 LFSATVP-EEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFMIAPLDLH-------- 367 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 +S +LK + E + IIFC T + Sbjct 368 -----------------------FSILYDVLKKH-----VAEDADYKVIIFCTTAMVTKL 399 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDI 581 + + Q + + +H + R + + F+K L+ +DV+ARG+D Sbjct 400 VAEILSQL---------RLNIREIHSRKSQSARTKVSDEFRKSRGLILVSSDVSARGVDY 450 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 V VI V +P ++Q Y+HR+GR GR + G + L+A ++ + Sbjct 451 PDVTLVIQVGVPADRQQYIHRLGRTGRKGKEGQGLLLLAPWEKYFLSSI 499 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 30/131 (23%), Positives = 53/131 (40%), Gaps = 6/131 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P +AV++ + T +Q ++P+IL G DVL A+TG+GKT AF +P I Sbjct 126 TRFDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAI 185 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ-----SREV 116 + V L + + + + + + L Q +R Sbjct 186 E-VLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGTRLT 244 Query 117 KEWHGCRATKG 127 +E +A Sbjct 245 QEQRSMQANPC 255 >sp|Q6BKH3|DBP7_DEBHA ATP-dependent RNA helicase DBP7 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP7 PE=3 SV=1 Length=798 Score = 245 bits (626), Expect = 3e-69, Method: Composition-based stats. Identities = 96/482 (20%), Positives = 176/482 (37%), Gaps = 80/482 (17%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVAL-------------SKAPDGYIVK 268 +K+ F L + FK P K + ++ G + Sbjct 157 LKDATTFDGLGLNDKLATHLTESLRFKAPTKVQRSVIPSLIATQRDLFVKAQTGSGKTLS 216 Query 269 SQHSGNAQVTQTKF----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 ++ + + A+I+ P+REL Q ++ + + + ++I Sbjct 217 FLLPIFHKLMSEEKYKITRESGLFAIILVPTRELCTQIYGVLETLVRC--HHHIVPGIVI 274 Query 325 GGVAARDQLSVLENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 GG + + + L GV+I+V TPGRL D + +T L++SQ+R+L+LDE D L G+ + Sbjct 275 GGEKKKSEKARLRKGVNILVATPGRLADHMENTTSLDVSQLRWLILDEGDRLTELGFEET 334 Query 384 INRMHNQIPQVTSDGKRLQV----------IVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 I ++ + I + + + + ++CSAT+ +VKKL I++ P + + Sbjct 335 ITKITDNISKNSKISETIHKYQGLPTERVNVLCSATIQD-NVKKLGNMILNNPETISVDS 393 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 + T++ D GK D + K P S +K L Sbjct 394 NKQIEGTLNFDDEEEQNNFDSNNSE-GKRMSAPDQLIQKILVVPPKLRLVALSAMLKKLS 452 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS------------ 541 E ++ + + I+F + F + G K+ ++ + Sbjct 453 KE--TNSLDDGVNRRTIVFFSCSDSLNFHFDVFTRNGNMFKKRKNRETDKFETVEVPYYS 510 Query 542 --------------------------CVCLHGDRKPHERKQNLERF--------KKGDVR 567 LHG +R L+ F Sbjct 511 KYDNEDDNEEDKPSILTAPILGSNSCVYKLHGSLSQQQRATTLQAFIKEKNEGKNSAKHS 570 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L CTDVA+RG+D+ + VI P ++++HRIGR R G A+ + E+ + Sbjct 571 ILFCTDVASRGLDLPNISSVIEYDPPFSVEDHLHRIGRSARVGNEGSAVLFLLPGNEEGY 630 Query 628 YH 629 Sbjct 631 VD 632 Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats. Identities = 25/97 (26%), Positives = 43/97 (44%), Gaps = 4/97 (4%) Query 2 AAFSEMGVMPEIAQAVEE-MDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIP 59 F +G+ ++A + E + + PT +Q IP LI D+ + A+TGSGKT +F +P Sbjct 161 TTFDGLGLNDKLATHLTESLRFKAPTKVQRSVIPSLIATQRDLFVKAQTGSGKTLSFLLP 220 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 + + K + + G I + Y Sbjct 221 IFHKLMSEEKYKITRESGLFAI--ILVPTRELCTQIY 255 >sp|Q10RI7|RH38_ORYSJ DEAD-box ATP-dependent RNA helicase 38 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0158200 PE=3 SV=1 Length=505 Score = 238 bits (607), Expect = 5e-69, Method: Composition-based stats. Identities = 96/462 (21%), Positives = 167/462 (36%), Gaps = 83/462 (18%) Query 224 NQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS---KAPDGYIVKSQHSGNAQ---- 276 + A F L LK E F P K V L P ++ H+G+ + Sbjct 98 SAAAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCF 157 Query 277 ----VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 +++ +A+ + P+RELA+Q + + + K+ + I A+ Sbjct 158 VLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTG---ITCACAIP--PAQKD 212 Query 333 LSVLENGV----DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRM 387 + +V+GT G L ++ K+ + ++ LV DEAD +L G+ R+ Sbjct 213 YVPIAKMPKITDQVVIGTSGTLMKWINHKKILTNDIKILVFDEADHMLAEDGFRSDSERI 272 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 I + QV++ SAT + VK +++ + +K E+ + V V Sbjct 273 MRDIQRSAGG---CQVLLFSATFNER-VKDFVTRVIKDGNQIFVKKEELTLEKVKQYKVQ 328 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V + ++ K K+ Sbjct 329 VPDERAKIAVIKDKIFEFGQ-------------------------------------KVG 351 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 Q IIF RTK ++ + + C + G ER++ ++ FK G + Sbjct 352 QVIIFVRTKQSTKDVHNALTLE---------DYVCSSIQGSLDQSEREKIIQEFKNGYTK 402 Query 568 FLICTDVAARGIDIHGVPYVINVTLP--------DEKQNYVHRIGRVGRAERMGLAISLV 619 LI TDV ARG D V VIN +P + + Y+HRIGR GR R G +L+ Sbjct 403 VLISTDVLARGFDQAQVNLVINYDMPIKFGTRDEPDYEVYLHRIGRAGRFGRKGAVFNLL 462 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 E + + + + + E + + L + Sbjct 463 CGETDNTVMR----KIETYFQHNVPEVRNWQSEEDFERALKD 500 Score = 78.2 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 25/74 (34%), Positives = 42/74 (57%), Gaps = 3/74 (4%) Query 2 AAFSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILG--GGDVLMAAETGSGKTGAFSI 58 AAF ++ + PE+ + + +EM + P+ IQA ++P+IL D++ A GSGKT F + Sbjct 100 AAFEDLKLTPELLKGLHDEMGFSRPSKIQAVTLPMILTPPYKDLIAQAHNGSGKTTCFVL 159 Query 59 PVIQIVYETLKDQQ 72 ++ V K Q Sbjct 160 GMLSRVDPNRKVTQ 173 >sp|Q6CTN7|MAK5_KLULA ATP-dependent RNA helicase MAK5 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=MAK5 PE=3 SV=1 Length=796 Score = 245 bits (625), Expect = 6e-69, Method: Composition-based stats. Identities = 105/521 (20%), Positives = 188/521 (36%), Gaps = 68/521 (13%) Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 FS N + P VLK F P + ++ A G Sbjct 203 FSSNVDIDDQEPPVLPEWSENMDLSFTVLKG------LSGLGFTRPTEIQLKSIPLALKG 256 Query 265 YIVKSQHSGNAQVTQTKFLP-----------NAPKALIVEPSRELAEQTLNNIKQF-KKY 312 + + + S + T +P + LI P+RELA Q +++++ K Sbjct 257 HNIMGKASTGSGKTLAYGIPIIEQLIKDTSNDRSIGLIFTPTRELAHQVTDHLQKVWTKM 316 Query 313 IDNPKLRELLIIGGVAARDQLSVLE--NGVDIVVGTPGRLDDLVSTGK---LNLSQVRFL 367 K L + GG++ + Q +L+ I+V TPGR +L+ +++ L Sbjct 317 NKLNKYTILSLTGGLSIQKQERILKYDGSGRIIVATPGRFLELLERNPDLIPRFAKIDTL 376 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVT---------SDGKRLQVIVCSATLHSFDVKKL 418 VLDEAD LL G+ D ++ + + G Q ++ SAT KL Sbjct 377 VLDEADRLLQDGHFDEFEKILKLLGKARKIKTSIDGKPTGSGWQTMIFSATFSLDLFTKL 436 Query 419 SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 + W LK + + V+ + K + + + + Sbjct 437 DKTS-----WKILKTAGGENNEMEQVLNHLMKKI--------QFKSKPVIIDTNPEHKVT 483 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 + E E + + + Y I + ++FC L + Sbjct 484 SQVKESLIECLPMERDLYVYYFIMMYP-GTTLVFCNAIDSVKKLNAFLNNL--------- 533 Query 539 QFSCVCLHGDRKPHERKQNLERFKK--------GDVRFLICTDVAARGIDIHGVPYVINV 590 + S +H R +NLE+FK+ G LI +DVAARG+DI G+ +V++ Sbjct 534 KISSFQIHSSMAQKNRLRNLEKFKEQSEKNSKVGKPTILIASDVAARGLDISGIKHVLHY 593 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE----KVWYHVCSSRGKGCYNTRLKED 646 LP Y+HR GR R + G+++ + + ++ + V S++ K + K Sbjct 594 HLPRSADVYIHRSGRTARGDNEGVSVMICSPQESMGPLRKLRKVLSTK-KSSNPRKTKWQ 652 Query 647 GGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 + E ++S++ E + +I D Sbjct 653 NDVPMLPLEPDIVSQLRERSKIASELADDEIATKSLHKDDN 693 Score = 96.0 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 34/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (6%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI- 63 M + + + + + + PT+IQ +SIPL L G +++ A TGSGKT A+ IP+I+ Sbjct 222 ENMDLSFTVLKGLSGLGFTRPTEIQLKSIPLALKGHNIMGKASTGSGKTLAYGIPIIEQL 281 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQ-----MNPYDRGSAFAIGSDGLCCQSREV 116 + +T D+ G T + V + Q MN ++ + ++ GL Q +E Sbjct 282 IKDTSNDRSIGLIFTPTRELAHQVTDHLQKVWTKMNKLNKYTILSLTG-GLSIQKQER 338 >sp|A5E2I8|SPB4_LODEL ATP-dependent rRNA helicase SPB4 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=SPB4 PE=3 SV=1 Length=637 Score = 241 bits (616), Expect = 6e-69, Method: Composition-based stats. Identities = 98/463 (21%), Positives = 183/463 (40%), Gaps = 71/463 (15%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYIDN-----PKLRELLIIG--GVAARDQLSVLENGVD 341 A+++ P+RELA+Q + + + P+++ L++G G D S EN Sbjct 96 AIVMAPTRELAKQIQMVFDKVLELLPEEDSYEPRIKTQLLVGFLGNVREDLDSYQENRPQ 155 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 I++ TPGRL D +S + S + ++LDEAD LL + + ++ +P K+ Sbjct 156 ILIATPGRLLDFMSLQIVKTSSLEIVILDEADKLLDMSFETDVIKILKMLP------KQR 209 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + + SAT+ + + M+ P + +K ++ + + + L Sbjct 210 RTGLFSATISAAG-DTIFRTGMNNPVKLQVKTKNFLGEQ------------NNAPTSLQL 256 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 S++ + H K ++ +++++ +AI++ T + Sbjct 257 SYMMIEPEH----------------------KLTTMLQMLRDNQFKKAIVYFPTCTSVKH 294 Query 522 LEQYFIQ--QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG----DVRFLICTDVA 575 Q + + D LHG R LE+F +G L+ TDVA Sbjct 295 FYQMLSKLCKSSANDIDISALLFFSLHGQLTTKSRLNTLEKFTEGNDESKKYILMATDVA 354 Query 576 ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE-KEKVWYHVCSSR 634 ARGIDI V VI + P + ++HR GR GRA ++G AI ++ + +E+ + + Sbjct 355 ARGIDIPDVDLVIQIDPPTDPSVFLHRCGRTGRANKVGRAIVMLNNDTQEEDYVGFMEVK 414 Query 635 GKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 ED ++N+ Q + L + + ++ V + G V Y Sbjct 415 SVFMTKIDPPEDKDNHSFHNKFQ------KKLRKYMLEDRARHELAVKSYVGFVRY---- 464 Query 695 AAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLF 737 Y H+ L + L + L L +P + Sbjct 465 ------YSKHIASLIFRLASLDYIAIAKMYGLLRLPKMPESRY 501 Score = 91.0 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 8/106 (8%) Query 4 FSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + + + P + A+ +++ T +QA +IPL+ G DV++ A TGSGKT AF+IPV+ Sbjct 10 WENLRVDLEPWLKDAIRSLNYPTMTPVQASTIPLLSGNKDVIVEAVTGSGKTLAFAIPVL 69 Query 62 QIVYETLKDQQEGKKGKTTIKTGA------SVLNKWQMNPYDRGSA 101 Q V + L EG++ +K G + + Sbjct 70 QKVSKRLYQVPEGEEKPEPVKRGHMLAIVMAPTRELAKQIQMVFDK 115 >sp|Q869P0|DDX31_DICDI Probable ATP-dependent RNA helicase ddx31 OS=Dictyostelium discoideum OX=44689 GN=ddx31 PE=3 SV=2 Length=908 Score = 246 bits (629), Expect = 6e-69, Method: Composition-based stats. Identities = 102/598 (17%), Positives = 204/598 (34%), Gaps = 108/598 (18%) Query 230 ACVLKNAELKFNFGEEEFKFP---PKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-- 284 + L ++ G + + P + + K D + SG + Sbjct 211 SLQLSETLVRNLVGHMKHEKPTHIQEASITPILKGNDALVKAQTGSGKTLSYLIPVVQKL 270 Query 285 --------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL 336 + +I+ P+REL+ Q +++ K + +I+GG + + + Sbjct 271 TEQRVTRSDGCYCVIITPTRELSSQIYEELQKLLKPFY--WIVPGIIMGGENRSAEKARI 328 Query 337 ENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 G++I+V TPGRL D + +T +++ +LDEAD LL G+ + + N + Sbjct 329 RKGINILVATPGRLLDHLQNTQSFPTDNIKWCILDEADKLLDLGFEKDVTTIINLLDSKK 388 Query 396 SDGK-RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE----------------DSVP 438 K + Q I+ SATL S + +L+ + P ++ L + P Sbjct 389 RTMKFKRQNILVSATL-SEGISRLASLSLTSPVYIGLDSKVLEKGENPFQAAEKEMLQAP 447 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE--- 495 + V V K +RL + +T ++ NS + + Sbjct 448 KQLDQFYVEVESK-ERLTSLIAFIRWKTSNITIDKGDVASGNSSANSKMIVFFSSCDSVD 506 Query 496 -------------------------YAVRAIKEHKMDQAIIF------------------ 512 + I++HK + IF Sbjct 507 FHHYMFSNMKMDKERGVKRTKKEQIKQDKLIQQHKQKNSKIFQTGNESDDEESDNDDSDD 566 Query 513 ------CRTKIDCDNLEQYFIQQGGGPDKKGH----QFSCVCLHGDRKPHERKQNLERFK 562 + +E+ + P+ + LHG+ R + FK Sbjct 567 SDSNNSDSETDEEKEIEKQIKEATSNPNYRVKTSVFSVPIFKLHGELDQQTRTKTFFDFK 626 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 L+ TDV+ARG+D+ V +++ + ++Y+HRIGR R G ++ + Sbjct 627 NSPNGILLTTDVSARGLDLPSVNWIVQYDPCSDTKDYIHRIGRTARLGNQGCSLLFLLPS 686 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 ++K H+ +N +KE TI L + + + + ++ Sbjct 687 EKKYIDHLAK------FNVSVKEMKVTTI-------LQSLFYTSDGQLKKTSKSSQLESQ 733 Query 683 EFDGKVTYGQKRAAGGGSYK----GHVDILAPTVQELAALEKEAQTSFLHLGYLPNQL 736 D ++ + + + + + L A ++ S+LHLG++ Sbjct 734 VHDLQLLFERFLIYDSKAKEMARCAYQSFLRSYATHKADVKSIFHISYLHLGHVSKSF 791 Score = 82.1 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 6/100 (6%) Query 4 FSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + + + + + + M PT IQ SI IL G D L+ A+TGSGKT ++ IPV+Q Sbjct 209 WGSLQLSETLVRNLVGHMKHEKPTHIQEASITPILKGNDALVKAQTGSGKTLSYLIPVVQ 268 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + E + +G + + Y+ Sbjct 269 KLTEQRVTRSDGCY-----CVIITPTRELSSQIYEELQKL 303 >sp|A2QE29|SPB4_ASPNC ATP-dependent rRNA helicase spb4 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=spb4 PE=3 SV=2 Length=642 Score = 241 bits (616), Expect = 7e-69, Method: Composition-based stats. Identities = 91/403 (23%), Positives = 159/403 (39%), Gaps = 74/403 (18%) Query 262 PDGYIVKSQHSGNAQVTQTKF--LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP--- 316 G + ++ + + + A+I+ P+RELA Q N + + Sbjct 61 GSGKTLSFLIPVVEKLLRLEEPLKKHHVGAIIISPTRELASQIYNVLTSLLAFHPPSAST 120 Query 317 --------------------KLRELLIIGG--VAARDQLSVLENGVDIVVGTPGRLDDLV 354 K+ L++GG A D + L+ +++V TPGRL +L+ Sbjct 121 LKPSDDDDDAPRQKFPSSTLKVVPQLLLGGSTTPAEDLSTFLKRSPNLLVSTPGRLLELL 180 Query 355 STGKLNL--SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS 412 S+ ++ S LV+DEAD LL G+ D + + ++P K+ + + SA++ S Sbjct 181 SSPHVHCPQSSFEMLVMDEADRLLDLGFKDTLQNILRRLP------KQRRTGLFSASV-S 233 Query 413 FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAK 472 V ++ + P V +K + + + R L +++ H Sbjct 234 EAVDQIVRVGLRNPVKVMVKVKGT-----------SGVQDKRTPASLQMTYLTAPPTHKF 282 Query 473 DNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG 532 + S E + + I+F T D L Sbjct 283 PAIKHILYSLEPAPQ--------------------KTIMFVSTCSGVDYLSAIL------ 316 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVT 591 P G F + LHG + + R++N RF L+ TDVA+RG+DI V VI + Sbjct 317 PSIIGDDFQLIPLHGKHQANVREKNFNRFVNSHTPAILLTTDVASRGLDIPSVDVVIQID 376 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 P + + ++HR GR GRA R GL++ L+ +E+ + R Sbjct 377 PPSDPKTFIHRCGRAGRAGRKGLSVVLLHPGREEDYVSFLEVR 419 Score = 93.3 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 26/94 (28%), Positives = 43/94 (46%), Gaps = 4/94 (4%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + + AV M + T +QA +IPL + DV++ A TGSGKT +F IPV++ + Sbjct 21 LSEWVLDAVASMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRL- 79 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +E K S + Y+ ++ Sbjct 80 ---EEPLKKHHVGAIIISPTRELASQIYNVLTSL 110 >sp|Q1E7Y4|MAK5_COCIM ATP-dependent RNA helicase MAK5 OS=Coccidioides immitis (strain RS) OX=246410 GN=MAK5 PE=3 SV=1 Length=783 Score = 244 bits (623), Expect = 7e-69, Method: Composition-based stats. Identities = 103/530 (19%), Positives = 192/530 (36%), Gaps = 87/530 (16%) Query 206 SKNGKDLGLAFEIP----PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA 261 + NG G++F + + + + L AEL+ + G +F P + Sbjct 166 TDNGIKTGVSFAALQDEVEEDVDVSAWDSLDLS-AELQTSLGRLKFSSPTPIQSACIPAV 224 Query 262 PDGY------------------------IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 G+ + K + ++ + P ALI+ P+RE Sbjct 225 LQGHDVIGKASTGSGKTLAFGIPIVEYFLGKYRGGRAPTASEERESTKEPMALILSPTRE 284 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG 357 LA Q ++ + N ++R + GG++ Q +L + DI++ TPGRL ++V + Sbjct 285 LAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLLAD-ADIIIATPGRLWEVVGSM 343 Query 358 K---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV-------------------- 394 L ++RFLV+DEAD LLS+G+ + + N I +V Sbjct 344 TGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSEREPEPEPD 403 Query 395 -TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 + Q +V SAT H +KLS K + + +D + + Sbjct 404 EEKKAEPRQTLVFSATFHKGLQQKLSGK-------IRYRNDDLL---------DKKESME 447 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 L +L R + ++ N E + + K + H + ++F Sbjct 448 YLLRKLNFREERPKFIDVNPISQMAQNLKEGLVQCAPMDKDLLLYTLLLYHPKHRTLVFT 507 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR---FLI 570 + + LH R +++ERF L+ Sbjct 508 NSISAVRR---------LTQLLQNLNLPTFALHSSMAQKARLRSVERFSSLSSDPSSILV 558 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 TDVAARG+DI G+ +++ +P YVHR GR RA G +I + A E+ + Sbjct 559 ATDVAARGLDIKGIDLIVHYHIPRTADTYVHRSGRTARASASGKSILICAPEETTGVARL 618 Query 631 C-----SSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 + + +++++ + +++ + + E Sbjct 619 VAKIHSNKKDSSATESKMEKKVPLQSVDLDRRIIDRLRPRVTLAKKITES 668 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 6/108 (6%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++A+ + + E+ ++ + + PT IQ+ IP +L G DV+ A TGSGKT AF IP+ Sbjct 189 VSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIPAVLQGHDVIGKASTGSGKTLAFGIPI 248 Query 61 IQIVYETLK------DQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 ++ + +E + K + S + + Sbjct 249 VEYFLGKYRGGRAPTASEERESTKEPMALILSPTRELAHQLNKHLTDL 296 >sp|Q7RZH4|MAK5_NEUCR ATP-dependent RNA helicase mak-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mak-5 PE=3 SV=1 Length=805 Score = 245 bits (624), Expect = 7e-69, Method: Composition-based stats. Identities = 99/516 (19%), Positives = 172/516 (33%), Gaps = 95/516 (18%) Query 241 NFGEEEFKFPPKDGFVALSKAPDGY-------------------IVKSQHSGNAQVTQTK 281 + + F P A+ + G+ +++S S Q K Sbjct 223 SIAKLRFSKPTVIQSKAIPEIMAGHDVIGKASTGSGKTLAFGIPVIESWLSAAETRKQNK 282 Query 282 FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD 341 ALI+ P+RELA+Q ++++ K + ++GG+A + Q L+ D Sbjct 283 EERKGATALILSPTRELAQQIRDHLQALCKGLPTAPY-ICSVLGGMAVQKQKRQLQV-AD 340 Query 342 IVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT--- 395 IV+ TPGR+ +++S+ +L + FLVLDEAD LL G+ + + + Sbjct 341 IVIATPGRMWEVMSSDNSVLASLRNISFLVLDEADRLLKDGHFKEAEEIFKALDRPPVEE 400 Query 396 ------------------------------SDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 + Q ++ SAT + +KL+ K Sbjct 401 NNEDQKMGGTDEEGQEEEEEDSEEEEEEEEEHVNKRQTLIFSATFNKNLQQKLAGKSKFK 460 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 T + L ++L V A + N E Sbjct 461 AT--------------------STQDMEYLLQKLNFRE-TPKFVDANPVHQMAENLKEGL 499 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + K Y + +A++F + L + L Sbjct 500 IMCGDMEKDLYLYATLMLQPTRRALVFTNSVNSVRRLTPLL---------ENLNLPAFPL 550 Query 546 HGDRKPHERKQNLERFK--------KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 H R ++++RFK G L+ TDVAARG+DI V VI+ +P + Sbjct 551 HSGMIQQARLRSIDRFKANEGAKKKNGSAAILVATDVAARGLDIPDVDLVIHYHVPRAAE 610 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 +YVHR GR RA G +I L ++ + + + Sbjct 611 DYVHRSGRTARASNSGTSILLCGPKEAVPTQRLVAKVHAQAEVKAGNSGNNTKKLVSSGL 670 Query 658 LLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQK 693 +I+ + + + K D K G++ Sbjct 671 RTIDIDRRIVAKLRERVDLAKKIADAVQAKTMGGKE 706 Score = 107 bits (268), Expect = 7e-23, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 66/161 (41%), Gaps = 18/161 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 M+ + + + P + ++ ++ + PT IQ+++IP I+ G DV+ A TGSGKT AF IPV Sbjct 208 MSEWVPLDLSPRMISSIAKLRFSKPTVIQSKAIPEIMAGHDVIGKASTGSGKTLAFGIPV 267 Query 61 IQIVY---ETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVK 117 I+ ET K +E +KG T + S + D A LC Sbjct 268 IESWLSAAETRKQNKEERKGATAL--ILSPTRELAQQIRDHLQA-------LCKGLPTAP 318 Query 118 EWHGCRATKGLMKGK---HYYEVSCHDQGLCRVGWSTMQAS 155 + K K ++ G W M + Sbjct 319 YICSVLGGMAVQKQKRQLQVADIVIATPGRM---WEVMSSD 356 >sp|Q93Y39|RH13_ARATH DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana OX=3702 GN=RH13 PE=2 SV=3 Length=826 Score = 245 bits (625), Expect = 8e-69, Method: Composition-based stats. Identities = 102/463 (22%), Positives = 179/463 (39%), Gaps = 52/463 (11%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +ALI+ P+RELA Q +++ K N ++ + I+GG+ + Q L+ +IVV TP Sbjct 281 RALIITPTRELALQVTEHLENAAK---NLSVKVVPIVGGMFSEKQERRLKEKPEIVVATP 337 Query 348 GRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG------ 398 GRL +L+S G+ + L + F VLDEAD ++ +G+ + + + +P Sbjct 338 GRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQT 397 Query 399 ------------KRLQVIVCSATLH-SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 K+ Q V SAT+ S D +K ++ +S+ Sbjct 398 VKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSI-------- 449 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + L ER G + + E + + + K Y + H Sbjct 450 -------EVLSERAGMRD-NVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHG 501 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + I+FC + D ++ G L + K R ++++RF+ + Sbjct 502 QGRTIVFCTSVTDLRHISGLLKILG---------LDVCTLFSEMKQRARLKSIDRFRASE 552 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 LI TD+ ARGIDI V +I+ LP + YVHR GR RA G +I+L+ + Sbjct 553 NGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNETS 612 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 +Y +C S + ++ + +L + + E + + + Sbjct 613 KFYTLCKSF--SMESVKIFPLDNSYMPAVRKRLYLARQIYEIERKGSRENADRTWLKKHA 670 Query 686 GKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLH 728 + +V T L L++E T H Sbjct 671 ESMELELDDEESEEERVDNVRQRKATSARLNKLKEELSTLLSH 713 Score = 88.6 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 30/116 (26%), Positives = 53/116 (46%), Gaps = 12/116 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPV 60 +A+S M + P + +++ +D+ PT IQ + G DV+ AAETGSGKT AF +P+ Sbjct 190 SAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPI 249 Query 61 IQIVYETLKD--QQEGKKGKTTIKTGA---------SVLNKWQMNPYDRGSAFAIG 105 +Q + + + + KG+ K A + + + + A Sbjct 250 LQRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKN 305 >sp|Q9FNM7|RH26_ARATH DEAD-box ATP-dependent RNA helicase 26 OS=Arabidopsis thaliana OX=3702 GN=RH26 PE=1 SV=2 Length=850 Score = 245 bits (625), Expect = 1e-68, Method: Composition-based stats. Identities = 100/463 (22%), Positives = 171/463 (37%), Gaps = 68/463 (15%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 L+ +K+ V++ A L +A +K G V Sbjct 386 QFPLSPLSLKAIKDAGFETMTVVQEATLPIIL--------QGKDVLAKAKTGTGKTVAFL 437 Query 271 HSGNAQVTQTKF-----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 V ++ L+V P+RELA Q KY +P + ++IG Sbjct 438 LPAIEAVIKSPPASRDSRQPPIIVLVVCPTRELASQAAAEANTLLKY--HPSIGVQVVIG 495 Query 326 GVAAR-DQLSVLENGVDIVVGTPGRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYS 381 G +Q + N I+V TPGRL D + L V+ LVLDEAD LL G+ Sbjct 496 GTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFR 555 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I R+ +P K+ Q + SAT+ +V+++ V LK + + V Sbjct 556 RDIERIIAAVP------KQRQTFLFSATVP-EEVRQIC--------HVALKRDHEFINCV 600 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + K +++ A+ +S +LK I Sbjct 601 QEGSGETHQKVTQMY--------------------MIASLDRHFSLLHVLLKEH-----I 635 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 ++ + IIFC T + + Q + +H + R + + F Sbjct 636 ADNVDYKVIIFCTTAMVTRLVADLLSQL---------SLNVREIHSRKPQSYRTRVSDEF 686 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 +K L+ +DV+ARG+D V V+ + LP +++ Y+HR+GR GR + G + L+A Sbjct 687 RKSKAIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAP 746 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 +E V + + + Q+ + +E Sbjct 747 WEEYFMSSVKDLPITKSPLPPIDPEAVKRVQKGLSQVEMKNKE 789 Score = 101 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 23/101 (23%), Positives = 47/101 (47%), Gaps = 1/101 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P +A+++ + T +Q ++P+IL G DVL A+TG+GKT AF +P I Sbjct 382 TRFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAI 441 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + V ++ ++ ++ + + + Sbjct 442 EAVIKSPPASRDSRQPPIIV-LVVCPTRELASQAAAEANTL 481 >sp|A2RA55|DBP7_ASPNC ATP-dependent RNA helicase dbp7 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp7 PE=3 SV=1 Length=771 Score = 243 bits (621), Expect = 1e-68, Method: Composition-based stats. Identities = 95/474 (20%), Positives = 166/474 (35%), Gaps = 53/474 (11%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP----DG 264 + P + F L + E K P ++++ D Sbjct 129 AEVEDAKPTNAPLIDGLDTFTNLGLSAPLAAHLLTKLEVKAPTAIQKASITQLLKEESDA 188 Query 265 YIVKSQHSGNAQVTQTKFLPN---------------------APKALIVEPSRELAEQTL 303 +I SG + A+++ P+REL +Q Sbjct 189 FIQAETGSGKTMAYLLPLVQRIMTISLNQKKREEGEQVQRDSGLFAIVLAPTRELCKQIA 248 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLS 362 ++ + + +IGG + + + L G++I+V TPGRL D + +T L++S Sbjct 249 VVLEGLLRC--AHWIVAGTVIGGEKKKSEKARLRKGLNILVATPGRLADHLENTQALDVS 306 Query 363 QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK------RLQVIVCSATLHSFDVK 416 VR+LVLDE D L+ G+ + + ++ + + I+CSATL V+ Sbjct 307 NVRWLVLDEGDRLMELGFEKELAGIIQKLDARQRPSRIPGIPAKRTTILCSATL-KMTVQ 365 Query 417 KLSEKIMHFPTWVDLKGEDS--------------VPDTVHHVVVPVNPKTD--RLWERLG 460 KL E + + D VP + V K L + Sbjct 366 KLGEISLKDAVHIQADPADEDGEPRKKDEDDAFRVPAQLKQSYAIVASKLRLVTLTAFMK 425 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 ++ +R V A+S + E G+ + + D+ + Sbjct 426 RTFMRKGSVMKAIIFVSCADSVDFHFEVFTRKNGDEEEKKEESEDSDEEDA-EEKRKKLG 484 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGI 579 I + + LHG H R L F + + LICTDVA+RG+ Sbjct 485 ASAHGTIAPATAFSNPSNPVALHRLHGSLPQHVRTATLGAFARNREPSVLICTDVASRGL 544 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 D+ V V+ ++++HRIGR R R G A+ + E+ + + Sbjct 545 DLPNVDLVVEYDPAFSAEDHLHRIGRTARLGRDGRALIFLMPGCEEGYVDILKK 598 Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 24/86 (28%), Positives = 46/86 (53%), Gaps = 2/86 (2%) Query 3 AFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPV 60 F+ +G+ +A + +++ PT IQ SI +L D + AETGSGKT A+ +P+ Sbjct 147 TFTNLGLSAPLAAHLLTKLEVKAPTAIQKASITQLLKEESDAFIQAETGSGKTMAYLLPL 206 Query 61 IQIVYETLKDQQEGKKGKTTIKTGAS 86 +Q + +Q++ ++G+ + Sbjct 207 VQRIMTISLNQKKREEGEQVQRDSGL 232 >sp|Q750F8|SPB4_EREGS ATP-dependent rRNA helicase SPB4 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SPB4 PE=3 SV=2 Length=599 Score = 240 bits (611), Expect = 1e-68, Method: Composition-based stats. Identities = 85/371 (23%), Positives = 145/371 (39%), Gaps = 54/371 (15%) Query 277 VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIGG--VAARDQ 332 +K +I+ P+RELA Q I+ F Y ++ L+IG + RD Sbjct 74 ANSSKLKKGHFHTIIISPTRELASQIQGVIEAFLTYYPDGEYPIKSQLLIGSNTSSVRDD 133 Query 333 LSV-LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 ++ LE+ I+VGTPGRL D + + S +LDEAD LL + + + + Sbjct 134 VAAFLEHRPQILVGTPGRLLDFLKMPNIKTSSCGAAILDEADKLLDMNFEKDVETILKML 193 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPK 451 P K+ + + SAT+ S + + M P V +K + P ++ + + P+ Sbjct 194 P------KQRRTGLFSATVSSAGTQVF-KTGMRNPVKVSVKTSNKAPSSLDINYIVIEPR 246 Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 +K + + + ++ + I+ Sbjct 247 ----------------------------------------MKLQLLLTLLNNYRYKKCIV 266 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLI 570 + T I Q +K LHG + R + L+RF + + L+ Sbjct 267 YLPTCIAVTYFYSIL-QHLAKLNKMDENLKLYSLHGKLLTNSRMKTLDRFTQELGKAVLL 325 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 TDVAARGIDI + V+ + P + ++HR GR GRA R G AI + +E+ + Sbjct 326 TTDVAARGIDIPDIDLVLQMDPPIDADIFLHRCGRAGRANRAGRAIVFLNQGREEDYIPF 385 Query 631 CSSRGKGCYNT 641 + Sbjct 386 LQVKNVEAKEL 396 Score = 91.0 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 3/102 (3%) Query 3 AFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 ++ + + P I AV+ M + T +QA +IPL DV++ + TGSGKT AF IPV Sbjct 6 SWDTLDYTLQPWIRTAVDAMGYETMTPVQASTIPLFARNKDVVVESVTGSGKTVAFVIPV 65 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 ++ V + + + KKG S + AF Sbjct 66 LERVIQDDANSSKLKKGHFHT-IIISPTRELASQIQGVIEAF 106 >sp|Q8SR49|SPB4_ENCCU ATP-dependent rRNA helicase SPB4 OS=Encephalitozoon cuniculi (strain GB-M1) OX=284813 GN=SPB4 PE=3 SV=1 Length=463 Score = 236 bits (601), Expect = 1e-68, Method: Composition-based stats. Identities = 89/417 (21%), Positives = 151/417 (36%), Gaps = 71/417 (17%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNN 305 + V S G + + + K A+++ P+RELA Q Sbjct 36 PEVLKGKDVVVQSPTGTGKTMAFLAPILSCIYDGKGRGRPGVTAVVITPTRELALQIREV 95 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 F ++ IGG++ + ++ I VGTPGRL ++V S + Sbjct 96 AGLF-------DVKCECFIGGMSIEEDYKRMKEEFSIAVGTPGRLLEIVGKETKKFSSLS 148 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 LVLDEAD LL G+ + + ++ ++P + + SAT + V KLS + Sbjct 149 HLVLDEADKLLGFGFEEKLMQLLAKLP------RNRVTGLFSATRND-SVDKLSRVFLRN 201 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P +++ + +P + ++VV K L + + Sbjct 202 PVSINVGNNE-MPVALEYIVVSPMEKLLVLMDIVT------------------------- 235 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + I+F T + D + G G + + Sbjct 236 --------------------GRRCIVFFATCSEVDFFSGLVSRAGFG--------NICKI 267 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG ER + E F + D L CTDVAARGID GV V++ +P E + VHR GR Sbjct 268 HGKISQDERNRVYEEFFQRD-GLLFCTDVAARGIDFRGVDLVVHFDVPKEYSSIVHRSGR 326 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 R G ++ V E+ + +G + + + + + E+ Sbjct 327 TARNGSKGESVLFVMP-NERAYVEFLKLKGIPAVESSYRMKSSLSYQDIKSMISPEL 382 Score = 83.6 bits (205), Expect = 1e-15, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 54/127 (43%), Gaps = 5/127 (4%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 ++ + + + +EE + T++Q + IP +L G DV++ + TG+GKT AF P++ + Sbjct 7 EDVAMNGRLKKEIEENGFGKMTEVQLKCIPEVLKGKDVVVQSPTGTGKTMAFLAPILSCI 66 Query 65 YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRA 124 Y+ +G+ + + + + F + + +++ + Sbjct 67 YDG-----KGRGRPGVTAVVITPTRELALQIREVAGLFDVKCECFIGGMSIEEDYKRMKE 121 Query 125 TKGLMKG 131 + G Sbjct 122 EFSIAVG 128 >sp|Q0JL73|RH26_ORYSJ DEAD-box ATP-dependent RNA helicase 26 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0618500 PE=2 SV=1 Length=536 Score = 238 bits (606), Expect = 2e-68, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 161/408 (39%), Gaps = 74/408 (18%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 ++ +K+ ++ A L G L+KA G K+ Sbjct 80 PVSPLSLKAIKDAGYEKMTQVQEATLPIIL----------QGEDVLAKAKTG-TGKTVAF 128 Query 273 GNAQVTQTKFLPNAPKA--LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA- 329 + LP +P L++ P+RELA Q ++ KY + L ++IGG Sbjct 129 LLPAIELLSTLPRSPSINLLVICPTRELANQVAAEARKLLKY--HRSLGVQVVIGGTKLP 186 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINR 386 ++Q S+ N I+V TPGRL D + + V+ LVLDEAD LL G+ I + Sbjct 187 QEQRSMQSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEK 246 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF-PTWVDL--KGEDSVPDTVHH 443 + IP K Q ++ SAT+ +V+++S M +++ +G++ V Sbjct 247 IIAFIP------KERQTLLFSATVP-EEVRQISHIAMKRGYKFINTVKEGDEETHSQVSQ 299 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + + +S +LK I E Sbjct 300 MYMVAPLDLH-------------------------------FSILYNVLKKH-----IAE 323 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + I+FC T + + + Q + + +H + R + + F+K Sbjct 324 DADYKVIVFCTTAMVTKLVAEVLSQL---------KLNIREIHSRKSQSARTKVSDEFRK 374 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 L+ +DV+ARG+D V VI V LP +++ Y+HR+GR GR + Sbjct 375 SKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKGK 422 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 23/70 (33%), Positives = 40/70 (57%), Gaps = 0/70 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + V P +A+++ + T +Q ++P+IL G DVL A+TG+GKT AF +P I Sbjct 74 TRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAI 133 Query 62 QIVYETLKDQ 71 +++ + Sbjct 134 ELLSTLPRSP 143 >sp|Q9FFQ1|RH31_ARATH DEAD-box ATP-dependent RNA helicase 31 OS=Arabidopsis thaliana OX=3702 GN=RH31 PE=2 SV=2 Length=716 Score = 242 bits (617), Expect = 2e-68, Method: Composition-based stats. Identities = 95/427 (22%), Positives = 163/427 (38%), Gaps = 68/427 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 L+ +K+ V++ A L +A +K G V Sbjct 254 PLSPLSLKAIKDAGYETMTVVQEATLPIIL--------KGKDVLAKAKTGTGKTVAFLLP 305 Query 273 GNAQVTQTKF-----LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 V ++ AL++ P+RELA Q KY +P + ++IGG Sbjct 306 SIEVVVKSPPTSPDNKRPPILALVICPTRELANQAATEANTLLKY--HPSIGVQVVIGGT 363 Query 328 AAR-DQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDF 383 +Q + N I+V TPGRL D + L V+ LVLDEAD LL G+ Sbjct 364 RLGLEQKRMQTNPCQILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKD 423 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 I R+ + +P K Q + SAT+ +V+++ V L+ + + VH Sbjct 424 IERIISAVP------KERQTFLFSATVP-EEVRQIC--------LVALRRDHEFVNCVHE 468 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + + + ++ A+ +S +L+ I Sbjct 469 GTIETHQQVRQM--------------------HMIASLDRHFSLLYTLLREH-----IMG 503 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + + I+FC T + + + + +H + R + F+K Sbjct 504 NVDYKVIVFCTTAMVTKLVADLLGEL---------NLNVREIHSRKPQSYRTRVSNEFRK 554 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 L+ +DV+ARG+D V V+ V LP +++ Y+HR+GR GR + G I L+A + Sbjct 555 SKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLAPWE 614 Query 624 EKVWYHV 630 E + Sbjct 615 EYFLSSL 621 Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + P +A+++ + T +Q ++P+IL G DVL A+TG+GKT AF +P I Sbjct 248 TRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSI 307 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQ 92 ++V ++ + K+ + + Sbjct 308 EVVVKSPPTSPDNKRPP-ILALVICPTRELA 337 >sp|A6ZL85|MAK5_YEAS7 ATP-dependent RNA helicase MAK5 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=MAK5 PE=3 SV=1 Length=769 Score = 242 bits (618), Expect = 3e-68, Method: Composition-based stats. Identities = 103/533 (19%), Positives = 187/533 (35%), Gaps = 75/533 (14%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 D+D+ +K + KD+ + P ++ + + N K Sbjct 140 DVDEDVLKENVFNKDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLRPTEIQKKSIP 199 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPN----------APKALIVEPSRELAEQTLNNI 306 + + D S SG + P +LI P+RELA Q +++ Sbjct 200 VIMQGVDVMGKASTGSGKTLAYGIPIVEKLISNFSQKNKKPISLIFTPTRELAHQVTDHL 259 Query 307 KQFKKY-IDNPKLRELLIIGGVAARDQLSVLE--NGVDIVVGTPGRLDDLVSTGKL---N 360 K+ + + + L + GG++ + Q +L+ N IV+ TPGR +L+ Sbjct 260 KKICEPVLAKSQYSILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKR 319 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR--------LQVIVCSATLHS 412 S+V L+LDEAD LL G+ D ++ + + Q ++ SAT Sbjct 320 FSKVDTLILDEADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSSKIWQTLIFSATFSI 379 Query 413 FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAK 472 KLS ED + + H++ ++ + + + Sbjct 380 DLFDKLSSSRQVKDRRFK-NNEDELNAVIQHLMSKIHFNSKPVI------------IDTN 426 Query 473 DNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG 532 ++ + E E + + Y + +IFC L Y G Sbjct 427 PESKVSSQIKESLIECPPLERDLYCYYFLTMFP-GTTLIFCNAIDSVKKLTVYLNNLG-- 483 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR----------------FLICTDVAA 576 +H R ++LERFK+ + LI +DVAA Sbjct 484 -------IPAFQIHSSMTQKNRLKSLERFKQQSAKQKTINHSNPDSVQLSTVLIASDVAA 536 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE----KVWYHVCS 632 RG+DI GV +VI+ LP Y+HR GR RA G++ + + ++ + + Sbjct 537 RGLDIPGVQHVIHYHLPRSTDIYIHRSGRTARAGCEGVSAMICSPQESMGPLRKLRKTLA 596 Query 633 SRGKGCYNTR--------LKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI 677 ++ + +K + E +LS++ E + +I Sbjct 597 TKNSVSTDLNSRSTNRKPIKWQNTVPLLPIETDILSQLRERSRLAGELADHEI 649 Score = 90.6 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 52/102 (51%), Gaps = 6/102 (6%) Query 1 MAAFSEM-GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + ++ + + I Q+++ +++L PT+IQ +SIP+I+ G DV+ A TGSGKT A+ IP Sbjct 165 LPEWTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIMQGVDVMGKASTGSGKTLAYGIP 224 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA 101 +++ + +K K I + + D Sbjct 225 IVEKLISNF-----SQKNKKPISLIFTPTRELAHQVTDHLKK 261 >sp|Q54ZI9|DDX20_DICDI Probable ATP-dependent RNA helicase ddx20 OS=Dictyostelium discoideum OX=44689 GN=ddx20 PE=3 SV=2 Length=849 Score = 244 bits (622), Expect = 3e-68, Method: Composition-based stats. Identities = 102/463 (22%), Positives = 196/463 (42%), Gaps = 62/463 (13%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR-------------D 331 P LI+ P+RE+A Q + IK KY +++ + IGG+ + + Sbjct 160 RKPLVLIIAPTREIAVQIKDVIKSISKYC--KRIKCEVFIGGLNSNNNKDENNNNILNNE 217 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 ++ L NG I+VGTPG++ L+ L ++ +++DEAD LL +S IN +++ I Sbjct 218 DVNRL-NGTQIIVGTPGKIKSLIENLHLRTDTLKMVIMDEADKLLDASFSKTINWIYSAI 276 Query 392 PQVTSDGKR------LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 S+ +Q++ SAT S+ + L + M+ V+++ P Sbjct 277 GNGNSNKNNSSSGSGIQMLAFSATYPSYLIN-LLKLYMNNENLVEIRLCSDTPS------ 329 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 E + + + + ++N + N K + V +++ Sbjct 330 ----------LEGIKQYYQIFRNDFTENNYKTFQN------------KCKSLVLVLEQVS 367 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 QAIIFC KI + L + ++G + + G + +R + K + Sbjct 368 FYQAIIFCNHKIRGEELTRQLNREG---------WPTAFIAGGQNQKDRLSTMSALKSFN 418 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +R L+ TD+ +RGID+ V VIN+ LP + + Y HRIGR GR G++I+ + + + Sbjct 419 IRILVSTDLISRGIDVERVNLVINLDLPKDHETYFHRIGRTGRFGTYGVSITFINMKSIQ 478 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI-SQVEPD-IKVPVDE 683 + + N E+ + E+ ++++ + + I +V+ D I + Sbjct 479 QQQQQQQQQQQQIENENENENNNNNEGFQEIDFINQLIQEYSVDITERVDNDIIPEELYS 538 Query 684 FDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSF 726 + Q+ A + +L ++EL E E + + Sbjct 539 YQLSNPNDQQSLANLKLKQQQTILLNKQLEELKINENENENQY 581 Score = 88.6 bits (218), Expect = 9e-17, Method: Composition-based stats. Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 3/89 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FSE+ + E+ + +E+ + P+ IQ ++IPL + G D++ A++G+GKT F + ++ Sbjct 56 TFSELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGTGKTIVFGVIALE 115 Query 63 IVYETLK---DQQEGKKGKTTIKTGASVL 88 V K +QE K + T +T +L Sbjct 116 CVLRESKLLRQKQELNKTQLTNQTNKQLL 144 >sp|Q6CDS6|ROK1_YARLI ATP-dependent RNA helicase ROK1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=ROK1 PE=3 SV=1 Length=547 Score = 237 bits (605), Expect = 3e-68, Method: Composition-based stats. Identities = 106/472 (22%), Positives = 174/472 (37%), Gaps = 81/472 (17%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 G+D L + + +L N LK N + + L+ D Sbjct 99 GEDSPLPIGSFEDLITRFNLHPYLLAN--LKKNKYTDPTPIQCESIPTMLN-GRDLIACA 155 Query 269 SQHSGNAQVTQTKFLP------------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNP 316 SG + KAL+V P++ELA Q N + + Sbjct 156 PTGSGKTMAYSIPMVEMLGKKKGSKDAKKGIKALVVAPTKELASQIFNAVFSLCVGVGKK 215 Query 317 K--LRELLIIGGVAAR-DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 K L+ L+ A + V DI + TP RL ++ G L+L + ++ DEAD Sbjct 216 KDELKPCLLDKSTADKLRNGKVSSQKYDICITTPLRLVSALNDGSLDLGSLDLVIFDEAD 275 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM-HFPTWVDLK 432 L +G++ ++ + P +Q + SAT+ V++L+ IM P + + Sbjct 276 KLFEKGFATQVDDILAACP------SGIQKTLFSATIP-ASVEQLANSIMSTDPLRIIIG 328 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + + TV +V + +L + Sbjct 329 NKQAAAQTVEQKLVYAGNEEGKLVAIRQMAR----------------------------- 359 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 + + IIF ++ L + + G + +HGD Sbjct 360 ---------EGQLVAPVIIFLQSIDRAKALFKELVFDG---------INVDQIHGDMTAA 401 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 +R ++RF+ G+V LICTDV ARGID G+ VIN +P Q+YVHRIGR GRA R+ Sbjct 402 KRASVIDRFRNGEVWVLICTDVLARGIDFRGINLVINYDVPQSAQSYVHRIGRTGRAGRL 461 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 G A++ E ++ K N + W N + L++ E Sbjct 462 GKAVTFFTKED--------ATNVKVVVNVMKQSGQEVPDWLNNLAPLTQKER 505 Score = 96.7 bits (239), Expect = 1e-19, Method: Composition-based stats. Identities = 40/168 (24%), Positives = 78/168 (46%), Gaps = 16/168 (10%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F ++ + P + +++ + PT IQ ESIP +L G D++ A TGSGKT A+ Sbjct 106 IGSFEDLITRFNLHPYLLANLKKNKYTDPTPIQCESIPTMLNGRDLIACAPTGSGKTMAY 165 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV 116 SIP+++++ + + K K + + + ++ + + G+ + E+ Sbjct 166 SIPMVEMLGKKKGSKDAKKGIKALV---VAPTKELASQIFNAVFSLCV---GVGKKKDEL 219 Query 117 KEWHGCRATK-GLMKGKHY---YEVSCHDQGLCRVGWSTMQASLDLGT 160 K ++T L GK Y++ R+ + SLDLG+ Sbjct 220 KPCLLDKSTADKLRNGKVSSQKYDICITTP--LRLVSALNDGSLDLGS 265 >sp|A3LX02|SPB4_PICST ATP-dependent rRNA helicase SPB4 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=SPB4 PE=3 SV=2 Length=617 Score = 239 bits (609), Expect = 4e-68, Method: Composition-based stats. Identities = 87/399 (22%), Positives = 161/399 (40%), Gaps = 64/399 (16%) Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI- 313 + + + + SQ G A K A+++ P+RELA Q + +Y+ Sbjct 65 AIPVLQKVSNRLYDSQEEGEAP---EKVKQGHMLAIVLSPTRELASQIQSVFNNVIEYLP 121 Query 314 -DNPKLRELLIIGGVA--ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 D ++ L++G ++ D L++ I++ TPGR+ D +S+ + ++ V +LD Sbjct 122 EDKIPIKTQLLVGSLSTVRDDLDRFLKDKPHILIATPGRMLDFMSSQYVKMNSVEIAILD 181 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 EAD LL + + + ++P K+ + + SAT+ + + M+ P V Sbjct 182 EADKLLDFSFEKDVVNILKRLP------KQRRTGLFSATISAAG-NTIFRAGMNNPVKVA 234 Query 431 LKGE----DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 +K + +S P +H + + P+ Sbjct 235 VKSKSTTANSAPSALHISYLMIEPEK---------------------------------- 260 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 K ++ + +++ + I++ T + F Q+ + F LH Sbjct 261 ------KITTLIKLLHDYRYKKCIVYFPTCTSVKHFYSIF-QKIVNGNDNTESFKFYSLH 313 Query 547 GDRKPHERKQNLERFKKGDV----RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 G R + L+ F GDV L+ TDVAARGIDI V VI + P + ++HR Sbjct 314 GQLATKPRLRTLQSFTDGDVALNKHILMTTDVAARGIDIPDVDLVIQLDPPTDPDVFLHR 373 Query 603 IGRVGRAERMGLAISLVATEKEKV-WYHVCSSRGKGCYN 640 GR GRA ++G AI ++ ++ + +G Sbjct 374 CGRTGRANKVGRAIVMLNDGSRELDYVDFMEVKGVAMQE 412 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (6%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 + + P I +A+ + + T +QA +IPL+ G DV++ A TGSGKT AF+IPV+Q V Sbjct 14 QYDLQPWIKEAIASLGFPTMTPVQAATIPLLSGNKDVVVEAVTGSGKTLAFAIPVLQKVS 73 Query 66 ETLKDQQEGKKGKTTIKTGA------SVLNKWQMNPYDRGSA 101 L D QE + +K G S + + Sbjct 74 NRLYDSQEEGEAPEKVKQGHMLAIVLSPTRELASQIQSVFNN 115 >sp|P0C218|DDX20_DANRE Probable ATP-dependent RNA helicase DDX20 OS=Danio rerio OX=7955 GN=ddx20 PE=3 SV=1 Length=761 Score = 242 bits (617), Expect = 4e-68, Method: Composition-based stats. Identities = 93/417 (22%), Positives = 160/417 (38%), Gaps = 65/417 (16%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY-IVKSQHSGNAQ---- 276 + F + +L L+ F+ P A+ G ++ SG + Sbjct 22 ISGGVEFSSLLLSKPVLE-GLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVF 80 Query 277 ---VTQTKFLPNAP-KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + L NA + L++ P+RE+A Q + ++ L + IGG Sbjct 81 TTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEG--LECHVFIGGRPISQD 138 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ----GYSDFINRMH 388 L+ I +G+PGR+ L+ G L +S +R VLDEAD LL + + IN ++ Sbjct 139 KQHLKK-CHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIY 197 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + +P Q++ SAT ++LS M PT+V L D + V Sbjct 198 SSLPA------NKQMLALSATYPESLAQQLSR-YMREPTFVRLNPTDPGLLGLKQYYKIV 250 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + + K + + + +Q Sbjct 251 PSHS--------------------------------LPHKVFEEKVQSLLELFSKIPFNQ 278 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 A++F +L +G VC+ G +R + + + K+ R Sbjct 279 ALVFSNLHTRAQHLADILSSKG---------LPAVCISGGLSQDQRLEAMWKLKQYQCRV 329 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 LI TD+ +RGID V VIN+ +P + + Y+HRIGR GR +G+A++ +E+ Sbjct 330 LISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIGRAGRFGTLGVAVTYCCHGEEE 386 Score = 82.5 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 61/390 (16%), Positives = 126/390 (32%), Gaps = 88/390 (23%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + + + + + P+ IQ ++IPL G D+++ A++G+GKT F+ + Sbjct 28 FSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIVQAKSGTGKTCVFTTIALDS 87 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC-----------Q 112 + + TT + + + + A +GL C Sbjct 88 LI---------LENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQD 138 Query 113 SREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGK 172 + +K+ H + G +K E+ R+ + +A L D Sbjct 139 KQHLKKCHIAIGSPGRIK--QLIEMGALMVSSIRL-FVLDEADKLLEDDSSS-------- 187 Query 173 KSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSK---NGKDLGLAFEIPPHMKNQALFP 229 S +Q + +S N + L L+ P + Q Sbjct 188 -SFQEQINW----------------------IYSSLPANKQMLALSATYPESLAQQ---- 220 Query 230 ACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP-- 287 L + F P G K + + + + + P Sbjct 221 ---LSRYMREPTFVRLNPTDPGLLGLKQYYKIVPSHSLPHKVFEEKVQSLLELFSKIPFN 277 Query 288 KALIVE--PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVD 341 +AL+ +R + + + L + I GG++ +L + + Sbjct 278 QALVFSNLHTR---------AQHLADILSSKGLPAVCISGGLSQDQRLEAMWKLKQYQCR 328 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLV-LD 370 +++ T DL S G ++ +V ++ LD Sbjct 329 VLIST-----DLTSRG-IDAEKVNLVINLD 352 >sp|Q54TF8|DDX19_DICDI ATP-dependent RNA helicase ddx19 OS=Dictyostelium discoideum OX=44689 GN=helC PE=2 SV=1 Length=465 Score = 234 bits (597), Expect = 5e-68, Method: Composition-based stats. Identities = 106/470 (23%), Positives = 191/470 (41%), Gaps = 87/470 (19%) Query 190 DTIGCYLDI----DKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEE 245 D G LDI + K ++LGL E+ + ++ A L Sbjct 49 DEFGIQLDIQQSDPNSPLYSVKTFEELGLKPELLKGVYAMGYNKPSKIQEAAL------- 101 Query 246 EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNN 305 + +A S++ G + NAP+A+ + P++ELA QT Sbjct 102 PIIIQSPNNLIAQSQSGTGKTAAFTL---GMLNCVDPSINAPQAICISPTKELALQTFEV 158 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 I + ++ ++ LL I + ++ +++GTPG++ + V +L++ ++ Sbjct 159 ISKIGQF---SNIKPLLYISEIEVPKNVTN-----QVIIGTPGKILENVIKKQLSVKFLK 210 Query 366 FLVLDEADGLLSQ-GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 +VLDEAD ++ + I ++ +P ++V + SAT S V++L +KI+ Sbjct 211 MVVLDEADFIVKMKNVPNQIAMINRLLP------SNVKVCLFSATF-SMGVEELIKKIVQ 263 Query 425 FP-TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 P T + LK ++ + +H + + ++ Sbjct 264 DPYTSIRLKRQELSVEKIHQYFIDCGSEDNKAL--------------------------- 296 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 IL Y ++ Q+I+F T ++ Q + +G S Sbjct 297 -------ILSDIYGFISV-----GQSIVFVHTIATAKSVHQKMVDEG---------HSVS 335 Query 544 CLHG-DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------DEK 596 L+G D ER + ++ FK G + LI T+V ARGIDI V VIN +P + Sbjct 336 LLYGKDLTTEERFKQIKDFKDGKSKVLITTNVLARGIDIPQVSLVINYDVPLDEMGKPDP 395 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKE-KVWYHVCSSRGKGCYNTRLKE 645 +Y+HRIGRVGR R G+A+S V ++ ++ + G + E Sbjct 396 VHYLHRIGRVGRFGRSGVALSFVYDQQSTNKLMNISTHLGVPLKELKSSE 445 Score = 89.4 bits (220), Expect = 2e-17, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 50/104 (48%), Gaps = 10/104 (10%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIP 59 + F E+G+ PE+ + V M + P+ IQ ++P+I+ +++ +++G+GKT AF++ Sbjct 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 ++ V ++ Q S + + ++ S Sbjct 129 MLNCVDPSINAPQ---------AICISPTKELALQTFEVISKIG 163 >sp|Q750Q4|MS116_EREGS ATP-dependent RNA helicase MSS116, mitochondrial OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MSS116 PE=3 SV=1 Length=658 Score = 239 bits (610), Expect = 5e-68, Method: Composition-based stats. Identities = 99/453 (22%), Positives = 178/453 (39%), Gaps = 60/453 (13%) Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLN 304 + + VA +K G + ++ + N KA+++ P+R+LA Q N Sbjct 157 LKPILQTEHDVVARAKTGTGKTLAFLMPLFQRLLEGPPSENV-KAVVIAPTRDLAAQIFN 215 Query 305 NIKQFKKYI-DNPKLRELLIIGGVAARDQLSVL-ENGVDIVVGTPGRLDDLVST-GKLNL 361 I + + + ++++GG + + L +IVV TPGRL D++ G Sbjct 216 EINEMRNANRKLRRFNAVVMMGGSSRTETFRSLERRRPNIVVATPGRLIDMLEACGPKYF 275 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK-RLQVIVCSATLHSFDVKKLSE 420 ++V F VLDEAD LL G+ + ++++ + Q+ G ++ ++ SATL V+ L+ Sbjct 276 TEVDFKVLDEADTLLEIGFKQALEQINDILNQLNQKGTTHIRTLLVSATL-DDKVQSLAN 334 Query 421 KIMHFPTWVDLK----GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 IM+ + + E + + + VV D + L K Sbjct 335 SIMNHAKCLFIDTVDPNEQATNENIAQKVVISKDFADNITASLYKIREEASA-------- 386 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 + +AI+F T + + + Q G Sbjct 387 ---------------------------NPKLKAIVFMPTIVAVEYWGELLQSQCRGT--- 416 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 + HG R ++RF+ D L+CTDVAARG+D+ V +V V +P Sbjct 417 ----PVLLFHGGLSQGRRNSTMKRFRAMDSGILVCTDVAARGMDVSDVQHVYQVGVPTSP 472 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM 656 NY+HRIGR GRA R G + +A + + + + + + D Sbjct 473 DNYIHRIGRTGRAGRKGSSTIFLAEHELCIL-DILRRKNNVVISDQETFDAAA------- 524 Query 657 QLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVT 689 Q LS++ E + ++ + + + G Sbjct 525 QELSDVREAFSLDRDRLHDFLLKNLSFYRGSQG 557 Score = 72.9 bits (177), Expect = 6e-12, Method: Composition-based stats. Identities = 20/102 (20%), Positives = 42/102 (41%), Gaps = 8/102 (8%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVIQIVYET 67 + E+ + ++ + T +Q +++ IL DV+ A+TG+GKT AF +P+ Q + E Sbjct 133 LSNELYEMLQSRGFDKLTPVQQKTLKPILQTEHDVVARAKTGTGKTLAFLMPLFQRLLE- 191 Query 68 LKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 G + + ++ + + L Sbjct 192 ------GPPSENVKAVVIAPTRDLAAQIFNEINEMRNANRKL 227 >sp|Q5BGX6|DBP7_EMENI ATP-dependent RNA helicase dbp7 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp7 PE=3 SV=1 Length=778 Score = 242 bits (617), Expect = 5e-68, Method: Composition-based stats. Identities = 89/413 (22%), Positives = 161/413 (39%), Gaps = 69/413 (17%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + ++++ G+A+ + + A+I+ P+REL +Q ++ + + +IG Sbjct 218 LSRAKNEGDAKGDTSVHRDSGLFAIILAPTRELCKQISVVLEGLLRC--AHWIVAGTVIG 275 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G + + + L G++I+V TPGRL D + +T L++S VR+LVLDE D L+ G+ + Sbjct 276 GEKKKSEKARLRKGLNILVATPGRLADHLENTQALDVSNVRWLVLDEGDRLMELGFEKEL 335 Query 385 NRMHNQIPQVTSDGK------RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 + +++ + + I+CSATL +V+KL E + + D Sbjct 336 QEIISKLDARQRPSRIPGVPAKRATILCSATL-KMNVQKLGEISLKDAVHIKADPAD--- 391 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 + + R+ +L +S+ + L Sbjct 392 EDGEKTAEDKDGDAFRVPAQLKQSYAIVAA-----------------KLRLVTLTAFMKR 434 Query 499 RAIKEHKMDQAIIFCR------------TKIDCDNLEQYFIQQGGGPD------------ 534 +++ + +AIIF T+ + LE +G + Sbjct 435 TFMRKGSVMKAIIFVSCADSVNFHFEVFTRKLAEQLEGDNPDEGSDSEHEKEKEKEKPTP 494 Query 535 --------------KKGHQFSCVCLHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGI 579 + + LHG H R L F K D LICTDVA+RG+ Sbjct 495 ASTHGTVAPATAFSNSSNAVTMYKLHGSLPQHVRTSTLSSFAKNRDPSVLICTDVASRGL 554 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+ V V+ ++HRIGR R R G A+ + E+ + + Sbjct 555 DLPNVDLVVEYDPAFSADEHLHRIGRTARLGRDGRALVFLLPGCEENYVEILK 607 Score = 75.2 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 3/82 (4%) Query 3 AFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPV 60 F+ +G+ P +A + +++ PT IQ SI +L D + AETGSGKT A+ +P+ Sbjct 152 TFTNLGLSPTLAAHLLTKLELKAPTAIQKASITQLLKEETDAFIQAETGSGKTLAYLLPL 211 Query 61 IQIVYETLKDQQEG-KKGKTTI 81 +Q + + + EG KG T++ Sbjct 212 VQRIMALSRAKNEGDAKGDTSV 233 >sp|P38112|MAK5_YEAST ATP-dependent RNA helicase MAK5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MAK5 PE=1 SV=1 Length=773 Score = 241 bits (616), Expect = 6e-68, Method: Composition-based stats. Identities = 100/520 (19%), Positives = 180/520 (35%), Gaps = 75/520 (14%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 KD+ + P ++ + + N K + + D S Sbjct 157 KDINIDDISPVNLPEWTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIMQGVDVMGKAS 216 Query 270 QHSGNAQVTQTKFLPN----------APKALIVEPSRELAEQTLNNIKQFKKY-IDNPKL 318 SG + P +LI P+RELA Q +++K+ + + + Sbjct 217 TGSGKTLAYGIPIVEKLISNFSQKNKKPISLIFTPTRELAHQVTDHLKKICEPVLAKSQY 276 Query 319 RELLIIGGVAARDQLSVLE--NGVDIVVGTPGRLDDLVSTGKL---NLSQVRFLVLDEAD 373 L + GG++ + Q +L+ N IV+ TPGR +L+ S+V L+LDEAD Sbjct 277 SILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVNTLILDEAD 336 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKR--------LQVIVCSATLHSFDVKKLSEKIMHF 425 LL G+ D ++ + + Q ++ SAT KLS Sbjct 337 RLLQDGHFDEFEKIIKHLLVERRKNRENSEGSSKIWQTLIFSATFSIDLFDKLSSSRQVK 396 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 ED + + H++ ++ + + + ++ + E Sbjct 397 DRRFK-NNEDELNAVIQHLMSKIHFNSKPVI------------IDTNPESKVSSQIKESL 443 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 E + + Y + +IFC L Y G + Sbjct 444 IECPPLERDLYCYYFLTMFP-GTTLIFCNAIDSVKKLTVYLNNLG---------IPAFQI 493 Query 546 HGDRKPHERKQNLERFKKGDVR----------------FLICTDVAARGIDIHGVPYVIN 589 H R ++LERFK+ + LI +DVAARG+DI GV +VI+ Sbjct 494 HSSMTQKNRLKSLERFKQQSAKQKTINHSNPDSVQLSTVLIASDVAARGLDIPGVQHVIH 553 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE----KVWYHVCSSRGKGCYNTR--- 642 LP Y+HR GR RA G++ + + ++ + +++ + Sbjct 554 YHLPRSTDIYIHRSGRTARAGSEGVSAMICSPQESMGPLRKLRKTLATKNSVSTDLNSRS 613 Query 643 -----LKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI 677 +K + E +LS++ E + +I Sbjct 614 TNRKPIKWQNTVPLLPIETDILSQLRERSRLAGELADHEI 653 Score = 90.6 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 52/102 (51%), Gaps = 6/102 (6%) Query 1 MAAFSEM-GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 + ++ + + I Q+++ +++L PT+IQ +SIP+I+ G DV+ A TGSGKT A+ IP Sbjct 169 LPEWTNLAPLSMTILQSLQNLNFLRPTEIQKKSIPVIMQGVDVMGKASTGSGKTLAYGIP 228 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA 101 +++ + +K K I + + D Sbjct 229 IVEKLISNF-----SQKNKKPISLIFTPTRELAHQVTDHLKK 265 >sp|Q0UHM7|DBP7_PHANO ATP-dependent RNA helicase DBP7 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP7 PE=3 SV=1 Length=831 Score = 243 bits (619), Expect = 6e-68, Method: Composition-based stats. Identities = 102/492 (21%), Positives = 176/492 (36%), Gaps = 76/492 (15%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKA----PDGYIV 267 + P F + + + + K P A+++ D +I Sbjct 171 EPIEPSNAPLSSELDTFTSLGISTTLAAHLLKKMDLKAPTAIQKAAITQLVKDDSDAFIQ 230 Query 268 KSQHSGNAQVTQTKFLPN---------------------APKALIVEPSRELAEQTLNNI 306 SG + A+I+ P+REL++Q + Sbjct 231 AETGSGKTLAYLLPIVQRLMELSANMKKHKDDDAVQRNSGLFAIIMAPTRELSKQIALVL 290 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVR 365 ++ L +IGG + + + L G++I+V TPGRL D + T L++S VR Sbjct 291 EKLL--GCAHWLVATTVIGGEKKKSEKARLRKGINILVATPGRLADHLEHTEALDVSNVR 348 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIP--------QVTSDGKRLQVIVCSATLHSFDVKK 417 +LVLDE D L+ G+ I ++ + ++ + ++CSAT+ DV++ Sbjct 349 WLVLDEGDRLMELGFEQEIQKIVGALNLRMRGNKTRIPGLPDKRTTVLCSATM-KMDVER 407 Query 418 LSEKIMHFPTWVDLKGEDS-------------VPDTVHHVVVPVNPKTD--RLWERLGKS 462 L + + + + P + V PK L L ++ Sbjct 408 LGQISLKDAVHLRADPTEREQEGDEPQDERSYAPAQLKQSYAVVAPKLRLVSLIAYLKRA 467 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA----------------IKEHKM 506 R V A+S + + + E +A K K Sbjct 468 FTRKGSVMKAIVFVSCADSVDFHFDILTSNLEEKNEKAEGTKDDTEEKADDDEPKKSTKK 527 Query 507 DQAI-IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF-KKG 564 +AI TK+ + + K H + LHG + R L F K Sbjct 528 PKAIPQADPTKLSVTH------AESPVLSPKSHAVTAYRLHGSLQQSLRTSTLAHFTKNN 581 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 D LI TDVA+RG+D+ V V+ +++++HRIGR RA R G A + E Sbjct 582 DAAVLIATDVASRGLDLPNVDLVVEFDPAFAREDHLHRIGRTARAGRDGRACIFLMPGPE 641 Query 625 KVWYHVCSSRGK 636 + + + + K Sbjct 642 EGYVDILKTDRK 653 Score = 70.5 bits (171), Expect = 4e-11, Method: Composition-based stats. Identities = 31/137 (23%), Positives = 55/137 (40%), Gaps = 11/137 (8%) Query 3 AFSEMGVMPEIA-QAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPV 60 F+ +G+ +A +++MD PT IQ +I ++ D + AETGSGKT A+ +P+ Sbjct 186 TFTSLGISTTLAAHLLKKMDLKAPTAIQKAAITQLVKDDSDAFIQAETGSGKTLAYLLPI 245 Query 61 IQIVYE------TLKDQQEGKKGKTTIKTGASVLNKWQMNP---YDRGSAFAIGSDGLCC 111 +Q + E KD ++ + + ++ A Sbjct 246 VQRLMELSANMKKHKDDDAVQRNSGLFAIIMAPTRELSKQIALVLEKLLGCAHWLVATTV 305 Query 112 QSREVKEWHGCRATKGL 128 E K+ R KG+ Sbjct 306 IGGEKKKSEKARLRKGI 322 >sp|P36120|DBP7_YEAST ATP-dependent RNA helicase DBP7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP7 PE=1 SV=1 Length=742 Score = 241 bits (614), Expect = 7e-68, Method: Composition-based stats. Identities = 108/582 (19%), Positives = 202/582 (35%), Gaps = 66/582 (11%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP----- 262 N D +A F + + + + + K P A+ + Sbjct 125 NIHDENVAINPSNAPLKGDQFASLGVSSLLVSHLEQKMRIKKPTSIQKQAIPQIIGNAGK 184 Query 263 -DGYIVKSQHSGNAQVTQTKFLP------------NAPKALIVEPSRELAEQTLNNIKQF 309 D +I SG + + AL++ P+RELA Q + Sbjct 185 NDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVIAPTRELASQIYHVCSTL 244 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL---NLSQ-VR 365 L L+IGG + + + L G + ++GTPGR+ D + K+ LSQ +R Sbjct 245 VSCC--HYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHLQNTKVIKEQLSQSLR 302 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR-------LQVIVCSATLHSFDVKKL 418 ++VLDE D L+ G+ + I+ + + + + ++ L ++CSATL V +L Sbjct 303 YIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVHMLCSATLTDG-VNRL 361 Query 419 SEKIMHFPTWVDLKGED------SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAK 472 + + + PD + + V PK + ++I D + + Sbjct 362 RNVALKDYKLISNGTKKDSDIVTVAPDQLLQRITIVPPKLRLVTLAATLNNITKDFIASG 421 Query 473 DNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG 532 ++ + + + HK T L + Sbjct 422 QQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKN-------LTGDSVRLLTKGNTMFPCF 474 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERF------KKGDVRFLICTDVAARGIDIHGVPY 586 D + LHG R L+ F KG + CTDVA+RG+D+ V Sbjct 475 SDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCTDVASRGLDLPHVGS 534 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-------SRGKGCY 639 VI + P ++++HR+GR RA G ++ + +E+ + K Sbjct 535 VIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQPYHPMGWELLKFDK 594 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGG 699 + + N+ + + + N + E + + + +R G Sbjct 595 EILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWHLNIE---RRVVGDS 651 Query 700 SY-----KGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQL 736 ++ KG + + ++ +K FLHLG+L Sbjct 652 AFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSF 693 Score = 72.9 bits (177), Expect = 6e-12, Method: Composition-based stats. Identities = 25/97 (26%), Positives = 43/97 (44%), Gaps = 7/97 (7%) Query 4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLIL--GGG-DVLMAAETGSGKTGAFSIP 59 F+ +GV + +E +M PT IQ ++IP I+ G D + A+TGSGKT ++ +P Sbjct 145 FASLGVSSLLVSHLEQKMRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLP 204 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +I + L + + + Y Sbjct 205 IISTI---LNMDTHVDRTSGAFALVIAPTRELASQIY 238 >sp|Q9JJY4|DDX20_MOUSE Probable ATP-dependent RNA helicase DDX20 OS=Mus musculus OX=10090 GN=Ddx20 PE=1 SV=2 Length=825 Score = 241 bits (616), Expect = 1e-67, Method: Composition-based stats. Identities = 100/484 (21%), Positives = 173/484 (36%), Gaps = 67/484 (14%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY-IVKSQHSGNAQ--------VT 278 F + +L L+ F+ P A+ G ++ SG + + Sbjct 65 FESLLLSRPVLE-GLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALD 123 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + + LI+ P+RE+A Q + I I L + IGG + L+ Sbjct 124 SLILENYSTQILILAPTREIAVQIHSVITAIG--IKMEGLECHVFIGGTPLSQDKTRLKK 181 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG-YSDFINRMHNQIPQVTSD 397 I VG+PGR+ L+ LN +R +LDEAD LL +G + + IN +++ +P Sbjct 182 -CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASK-- 238 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 Q++ SAT L+ M PT+V L D + VN Sbjct 239 ----QMLAVSATYPEVLANALTR-YMRDPTFVRLNPSDPSLIGLKQYYQVVNS------- 286 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 + I K ++ + +QA++F Sbjct 287 -------------------------YPLAHKIFEEKTQHLQELFSKVPFNQALVFSNLHS 321 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 +L +G F C+ G+ ++R + + K+ R LI TD+ +R Sbjct 322 RAQHLADILSSKG---------FPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSR 372 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA-TEKEKVWYHVCSS--- 633 GID V V+N+ +P + + Y+HRIGR GR +GL ++ E+E + + Sbjct 373 GIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCNI 432 Query 634 -RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQ 692 C W E++ + ++ F + T G Sbjct 433 NLLPLPDPIPPGLMEECLNWDVEVKAAMHTYSSPTVATQSPKKQVQKLERAFQSQRTPGN 492 Query 693 KRAA 696 + + Sbjct 493 QTPS 496 Score = 82.9 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 59/155 (38%), Gaps = 22/155 (14%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + + + + + P+ +Q ++IPL G D+++ A++G+GKT FS + Sbjct 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC-----------Q 112 + Q + + + + +A I +GL C Sbjct 125 LILENYSTQ---------ILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQD 175 Query 113 SREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 +K+ H + G +K E+ + G R+ Sbjct 176 KTRLKKCHIAVGSPGRIK--QLIELDYLNPGSIRL 208 >sp|A5DGM4|SPB4_PICGU ATP-dependent rRNA helicase SPB4 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=SPB4 PE=3 SV=2 Length=601 Score = 237 bits (604), Expect = 1e-67, Method: Composition-based stats. Identities = 92/425 (22%), Positives = 150/425 (35%), Gaps = 75/425 (18%) Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKA----------- 289 + G D + SG L K Sbjct 31 SLGFRSMTPVQASTIPLFCGNKDVVVEAVTGSGKTLAFAIPVLERVTKCMKENRGSSGLY 90 Query 290 -LIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIG--GVAARDQLSVLENGVDIVV 344 +++ P+RELA Q ++ D P ++ LI+G D + EN I++ Sbjct 91 GIVISPTRELANQINTVFHTLLQFYPEDQPPIKTQLIVGSLATVREDLNAFAENKPQIII 150 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D S+ + S V +VLDEAD LL + + + + ++P K+ + Sbjct 151 ATPGRLLDFFSSNAVKRSTVEMVVLDEADRLLDISFQNDVVSILKKLP------KQRRTG 204 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGE--DSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SATL S + M P + + +S P ++ + VNP+T Sbjct 205 LFSATLSSAG-DSIFRTGMSNPVKISVNSNKAESKPQSLTVNYMMVNPET---------- 253 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 K + + + + I++ T Sbjct 254 ------------------------------KIAVLINMLSTLQYKKCIVYFPTCASVKYF 283 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR----FLICTDVAARG 578 F + + +HG R + + +F +GDVR L+ TDVAARG Sbjct 284 YSVFQKL-----HPLEDVNLTSIHGQLLAKARLKAMNKFTEGDVRTSKHVLLTTDVAARG 338 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK-EKVWYHVCSSRGKG 637 IDI V VI + P + ++HR GR GRA ++G AI ++ E + +G Sbjct 339 IDIPEVDLVIQLDPPTDPDMFLHRCGRTGRANKVGRAIVMLNNNALESDYVDFMEVKGLK 398 Query 638 CYNTR 642 Sbjct 399 MSEVE 403 Score = 93.7 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 A+S+ + P I A++ + + T +QA +IPL G DV++ A TGSGKT AF+IPV++ Sbjct 15 AWSQASLQPWIHDAIDSLGFRSMTPVQASTIPLFCGNKDVVVEAVTGSGKTLAFAIPVLE 74 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 V + +K E + S + Sbjct 75 RVTKCMK---ENRGSSGLYGIVISPTRELANQINTVFHTL 111 >sp|Q6C193|SPB4_YARLI ATP-dependent rRNA helicase SPB4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SPB4 PE=3 SV=1 Length=626 Score = 237 bits (605), Expect = 2e-67, Method: Composition-based stats. Identities = 117/550 (21%), Positives = 197/550 (36%), Gaps = 88/550 (16%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 KDL +A + M+ ++ + + G ++ G S ++V Sbjct 6 KDLPVAPWLIDTMEQFGFTDMTPVQASVIPMFAGNKDVIVEAVTG----SGKTIAFLVPL 61 Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF-------------------- 309 + + + +++V P+RELA QT ++ Sbjct 62 IQRMLNLLKEGPAVSGRVYSVVVSPTRELARQTYEVLQSILEMGCPEADASDKITLEKKK 121 Query 310 ---KKYIDNPKLRELLIIGGV--AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 K+R LI+GG + D + L + I+V TPGRL +L+ ++ S Sbjct 122 KGKAAPTMPKKIRGQLIMGGDLPSHMDLKNFLRDKPQIIVATPGRLLELLRAPQIKTSAF 181 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 LVLDEAD LL G+ I + N +P K+ + + SAT+ ++ L + + Sbjct 182 DSLVLDEADRLLDLGFGRDITSIINILP------KQRRTGLFSATITDA-IQNLVKIGLR 234 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 P + +K K + LG S++ + Sbjct 235 NPVKIVVK--------------VGGKKEQKTPLSLGLSYVVLEPRE-------------- 266 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 K YA+ + + +AI++ T +Q F G + + Sbjct 267 --------KLAYALNLLSIYPYRKAIVYLPTCAAVTYYQQMFSHLNEG---REEPYEIYG 315 Query 545 LHGDRKPHERKQNLERF-KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 LHG R + L ++ K G L+ TD+AARG+DI V V+ + P + + HR Sbjct 316 LHGKLPSSTRIKILNKYQKTGAQAILMTTDIAARGLDIPEVDLVVQLDPPSDADTFQHRC 375 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE 663 GR GRA R G AI L+ +E+ + + R +L+ G +L E Sbjct 376 GRAGRAGRQGQAIVLLHKGREEEYVDLMRVR-----KVKLRPYTGPGSELEGEKLDQEAT 430 Query 664 EHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQ 723 E V D + V++ + Y HV +Q L A Sbjct 431 ELYTKLRKWVLEDRQRHDQALLSFVSFVR-------FYSKHVAQSIFRIQSLDLPGLAAS 483 Query 724 TSFLHLGYLP 733 L L +P Sbjct 484 YGLLRLPKMP 493 Score = 88.3 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 2/100 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + ++ V P + +E+ + T +QA IP+ G DV++ A TGSGKT AF +P+I Sbjct 3 TDWKDLPVAPWLIDTMEQFGFTDMTPVQASVIPMFAGNKDVIVEAVTGSGKTIAFLVPLI 62 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA 101 Q + LK+ G+ S + Y+ + Sbjct 63 QRMLNLLKEG-PAVSGRVY-SVVVSPTRELARQTYEVLQS 100 >sp|A6ZZY8|DBP7_YEAS7 ATP-dependent RNA helicase DBP7 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP7 PE=3 SV=1 Length=742 Score = 240 bits (611), Expect = 2e-67, Method: Composition-based stats. Identities = 108/582 (19%), Positives = 202/582 (35%), Gaps = 66/582 (11%) Query 208 NGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP----- 262 N D +A F + + + + + K P A+ + Sbjct 125 NIHDENVAINPSNAPLKGDQFASLGVTSLLVSHLEQKMRIKKPTSIQKQAIPQIIGNAGK 184 Query 263 -DGYIVKSQHSGNAQVTQTKFLP------------NAPKALIVEPSRELAEQTLNNIKQF 309 D +I SG + + AL++ P+RELA Q + Sbjct 185 NDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVIAPTRELASQIYHVCSTL 244 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL---NLSQ-VR 365 L L+IGG + + + L G + ++GTPGR+ D + K+ LSQ +R Sbjct 245 VSCC--HYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHLQNTKVIKEQLSQSLR 302 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR-------LQVIVCSATLHSFDVKKL 418 ++VLDE D L+ G+ + I+ + + + + ++ L ++CSATL V +L Sbjct 303 YIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVHMLCSATLTDG-VNRL 361 Query 419 SEKIMHFPTWVDLKGED------SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAK 472 + + + PD + + V PK + ++I D + + Sbjct 362 RNVALKDYKLISNGTKKDSDIVTVAPDQLLQRITIVPPKLRLVTLAATLNNITKDFIASG 421 Query 473 DNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG 532 ++ + + + HK T L + Sbjct 422 QQSKTLRTIVFVSCSDSVEFHYDAFSGSDGHHKN-------LTGDSVRLLTKGNTMFPCF 474 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERF------KKGDVRFLICTDVAARGIDIHGVPY 586 D + LHG R L+ F KG + CTDVA+RG+D+ V Sbjct 475 SDSRDPDVVIYKLHGSLSQQMRTSTLQHFARDNEATKGKHLIMFCTDVASRGLDLPHVGS 534 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-------SRGKGCY 639 VI + P ++++HR+GR RA G ++ + +E+ + K Sbjct 535 VIELDPPFAVEDHLHRVGRTARAGEKGESLLFLLPGEEEKYMDYIQPYHPMGWELLKFDK 594 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGG 699 + + N+ + + + N + E + + + +R G Sbjct 595 EILMPAFKDVNVNRNDKFIRKDEKSSKNKDVGDKEYEWDTNATTWHLNIE---RRVVGDS 651 Query 700 SY-----KGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQL 736 ++ KG + + ++ +K FLHLG+L Sbjct 652 AFKNLAVKGFISHVRAYATHISQEKKFFNVKFLHLGHLAKSF 693 Score = 71.7 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 25/97 (26%), Positives = 43/97 (44%), Gaps = 7/97 (7%) Query 4 FSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLIL--GGG-DVLMAAETGSGKTGAFSIP 59 F+ +GV + +E +M PT IQ ++IP I+ G D + A+TGSGKT ++ +P Sbjct 145 FASLGVTSLLVSHLEQKMRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLP 204 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +I + L + + + Y Sbjct 205 IISTI---LNMDTHVDRTSGAFALVIAPTRELASQIY 238 >sp|Q9UHI6|DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 OS=Homo sapiens OX=9606 GN=DDX20 PE=1 SV=2 Length=824 Score = 241 bits (615), Expect = 2e-67, Method: Composition-based stats. Identities = 109/531 (21%), Positives = 193/531 (36%), Gaps = 80/531 (15%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY-IVKSQHSGNAQ--------VT 278 F + +L L+ F+ P A+ G ++ SG + + Sbjct 64 FESLLLSRPVLE-GLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALD 122 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + + LI+ P+RE+A Q + I I L + IGG + L+ Sbjct 123 SLVLENLSTQILILAPTREIAVQIHSVITAIG--IKMEGLECHVFIGGTPLSQDKTRLKK 180 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG-YSDFINRMHNQIPQVTSD 397 I VG+PGR+ L+ LN +R +LDEAD LL +G + + IN +++ +P Sbjct 181 -CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASK-- 237 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 Q++ SAT F L+ K M PT+V L D + VN Sbjct 238 ----QMLAVSATYPEFLANALT-KYMRDPTFVRLNSSDPSLIGLKQYYKVVNS------- 285 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 + + K ++ +QA++F Sbjct 286 -------------------------YPLAHKVFEEKTQHLQELFSRIPFNQALVFSNLHS 320 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 +L +G F C+ G+ ++R + + K R LI TD+ +R Sbjct 321 RAQHLADILSSKG---------FPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSR 371 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA-TEKEKVWYHVCSS--- 633 GID V V+N+ +P + + Y+HRIGR GR +GL ++ E+E + + Sbjct 372 GIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMRIAQKCNI 431 Query 634 --------RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 G + D + + S + L I ++E +++ Sbjct 432 NLLPLPDPIPSGLMEECVDWDVEVKAAVHTYGIASVPNQPLKKQIQKIERTLQIQ-KAHG 490 Query 686 GKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQL 736 + + + G S K + T Q+L ++ ++ + P +L Sbjct 491 DHMASSRNNSVSGLSVKSKNN----TKQKLP-VKSHSECGIIEKATSPKEL 536 Score = 82.9 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 61/155 (39%), Gaps = 22/155 (14%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + + + + + P+ +Q ++IPL G D+++ A++G+GKT FS + Sbjct 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 123 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC-----------Q 112 + + +T + + + + +A I +GL C Sbjct 124 LV---------LENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQD 174 Query 113 SREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 +K+ H + G +K E+ + G R+ Sbjct 175 KTRLKKCHIAVGSPGRIK--QLIELDYLNPGSIRL 207 >sp|Q59N29|SPB4_CANAL ATP-dependent rRNA helicase SPB4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=SPB4 PE=3 SV=1 Length=631 Score = 236 bits (603), Expect = 3e-67, Method: Composition-based stats. Identities = 98/463 (21%), Positives = 183/463 (40%), Gaps = 72/463 (16%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYID---NPKLRELLIIG--GVAARDQLSVLENGVDIV 343 ++++ P+RELA Q + Q +Y+ ++ L++G G D L N I+ Sbjct 96 SIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVREDLNQFLTNQPQIL 155 Query 344 VGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 +GTPGR+ + + S+ + S + ++LDEAD LL + + + ++P K+ + Sbjct 156 IGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFSFEKDVINILKKLP------KQRR 209 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED------SVPDTVHHVVVPVNPKTDRLW 456 + SAT+ S + M+ P V +K ++ + P ++ + +NP+ Sbjct 210 TGLFSATISSAG-NTIFRTGMNNPVKVQVKSKNYFGEQSNSPKSLQLSYMMINPE----- 263 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 LK + + +++ +AI++ T Sbjct 264 -----------------------------------LKITTLLTILSKYQYKKAIVYFPTC 288 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR----FLICT 572 + Q F + + LHG R + L+ F +GD+ L+ T Sbjct 289 TSVKHFYQIF-NKVYQQESSDEPLKFFSLHGQLNTKSRLKTLDNFTQGDINLYKHILMTT 347 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT-EKEKVWYHVC 631 DVAARGIDI V VI + P + ++HR GR GRA ++G AI ++ +E+ + Sbjct 348 DVAARGIDIPDVDLVIQIDPPTDPNVFLHRCGRTGRANKVGRAIVMLNDNCQEEDYIGFM 407 Query 632 SSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYG 691 +G + + Q+ L + + ++ V + G + Y Sbjct 408 EVKGIFLTKQDIPTSSATKNLHENFQI------KLRQYMLEDRARHELAVKSYVGFIRYY 461 Query 692 QKRAAGGGSYKGHVDILA-PTVQELAALEKEAQTSFLHLGYLP 733 K A +D L + L L K +T ++ +P Sbjct 462 SKHIASSIFRLATLDYLGIAKMYGLLRLPKMPETKYIDNSIMP 504 Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 11/123 (9%) Query 3 AFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 A+ + + I +A+ M + T +QA +IPL+ G DV++ A TGSGKT +F IPV Sbjct 9 AWENLRYDLHSWIKEAISSMGYPTMTPVQASTIPLLSGNKDVVVEAVTGSGKTLSFVIPV 68 Query 61 IQIVYETLKDQQEGKKGKTTIKTGA------SVLNKWQMNP---YDRGSAFAIGSDGLCC 111 +Q + + L +K G S + +++ + G Sbjct 69 LQKISDRLYKPDSDGDLPEPVKRGHMLSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRI 128 Query 112 QSR 114 ++ Sbjct 129 NTQ 131 >sp|A7TNT1|DBP7_VANPO ATP-dependent RNA helicase DBP7 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP7 PE=3 SV=1 Length=732 Score = 238 bits (607), Expect = 6e-67, Method: Composition-based stats. Identities = 88/442 (20%), Positives = 161/442 (36%), Gaps = 43/442 (10%) Query 259 SKAPDGYIVKSQHSGNAQVTQTKFL---PNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 ++ G + +++ K + A+ + P+RELA Q + + + Sbjct 191 AQTGSGKTLAFALPILSKILSMKTRVDRKSGCFAIFITPTRELATQIYHVLSELTNCC-- 248 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV----RFLVLDE 371 L L+IGG + + + + L G + ++GTPGR+ D + Q+ R++VLDE Sbjct 249 HYLVPCLLIGGESKKSEKARLRKGCNFIIGTPGRILDHFQNTQSVKEQLAVSLRYVVLDE 308 Query 372 ADGLLSQGYSDFINRMHNQIPQV-------TSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 AD L+ G+ + + + I + R+ I+CSAT V KL + Sbjct 309 ADKLMELGFEETLTDILKLIHDISLNTSVYPQLPSRIMHILCSAT-SKGSVTKLGNVALQ 367 Query 425 FPTWV------DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 + + +VPD + + V PK + I + K Sbjct 368 NYKMISNSHVTNELENATVPDQLLQKIAIVPPKLRLVTLAATLDSIHRKHIEQKKKKLDY 427 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ----QGGGPD 534 + ++ + + + + + + + Sbjct 428 VSRTVVFLSCSDSVNFHFEAFSSSD---------ANHRNLVGESARLLTKGNDILPSFDP 478 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKK------GDVRFLICTDVAARGIDIHGVPYVI 588 + F C LHG R L+ F K G L CTDVA+RG+D+ + VI Sbjct 479 ENDPDFICYKLHGSLSQQIRSSTLQHFSKTNENVKGKHLVLFCTDVASRGLDLPEIGTVI 538 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH-VCSSRGKGCYNTRLKEDG 647 + P ++++HRIGR RA + G ++ + +E+ + + KG D Sbjct 539 ELDPPFAVEDHLHRIGRTARAGKHGESLLFLLPGEEEGYMEYIKPYHTKGWKLVNYTNDL 598 Query 648 GCTIWYNEMQLLSEIEEHLNCT 669 + N S+ E N Sbjct 599 LKPSFQNVNVKRSDKETSKNVE 620 Score = 75.2 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 48/103 (47%), Gaps = 6/103 (6%) Query 4 FSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGGG--DVLMAAETGSGKTGAFSIPV 60 F + + ++ + E+M PT IQ +P +L D+ + A+TGSGKT AF++P+ Sbjct 146 FDSLKIEQQLVNHLNEKMRIQKPTSIQKLVLPQLLSSKNNDLFIHAQTGSGKTLAFALPI 205 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + + ++K + + K G I + + Y S Sbjct 206 LSKIL-SMKTRVDRKSGCFAI--FITPTRELATQIYHVLSELT 245 >sp|Q2GZU7|DBP7_CHAGB ATP-dependent RNA helicase DBP7 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=DBP7 PE=3 SV=1 Length=806 Score = 239 bits (610), Expect = 7e-67, Method: Composition-based stats. Identities = 105/458 (23%), Positives = 182/458 (40%), Gaps = 45/458 (10%) Query 208 NGKDLGLAFEIPPHM--KNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAP 262 N LG++ + H+ K + P + KN + G+ + + G +A Sbjct 142 NFHSLGVSRRVAQHLATKLEMKAPTAIQKNTVPQLINGDSDAFLQAETGSGKTLAYLLPI 201 Query 263 DGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 I+ + + TK N A+I+ P+REL +Q +++ + P L Sbjct 202 VHRIMSLSLNEDGTPKDTKVHRNSGLFAIIMAPTRELCKQISVVLEKVLRC--APWLVCT 259 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGY 380 +IGG + + + + + GV+I++ TPGRL D + +T LN+ VR+LVLDE D ++ G+ Sbjct 260 TVIGGESKKSEKARIRKGVNILIATPGRLADHLDNTKVLNVGTVRWLVLDEGDRMMEMGF 319 Query 381 SDFINRMHNQIPQVTSD-------------GKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 D I + +I + R ++CSAT+ +V+KL E + Sbjct 320 EDDIKTIVGKIRADKLEKVNAEGVVLDGVLPSRRVTVLCSATM-KMNVQKLGEISLEDAI 378 Query 428 WVDLKGEDS---------VPDTVHH--VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 + +S P + +V P + L L + R V Sbjct 379 HIMAAKSESDGDADAVFAAPSQLKQSCIVTPAKLRLVTLIALLKSTFARRGSVMKAIIFI 438 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 A+S + + +K K A++ D + TK + + + Sbjct 439 SCADSVDFHYQLLKDTK------AVEPPTPDSS----STKDRNPHTDTTVARAAYITSPA 488 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDE 595 + LHG R L F LI TD+++RG+D+ V VI Sbjct 489 NPKVMLHKLHGSLAQPVRSATLNAFSACKDPAVLITTDISSRGLDVPAVDLVIEYDPAFA 548 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 ++VHRIGR RA R G A+ + E+ + + +S Sbjct 549 VPDHVHRIGRTARAGRAGKAVLFLLPGCEEGYTTILNS 586 Score = 70.9 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 23/164 (14%) Query 4 FSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 F +GV +AQ + +++ PT IQ ++P ++ G D + AETGSGKT A+ +P++ Sbjct 143 FHSLGVSRRVAQHLATKLEMKAPTAIQKNTVPQLINGDSDAFLQAETGSGKTLAYLLPIV 202 Query 62 QIVYE-------TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC--- 111 + T KD + + + + + L C Sbjct 203 HRIMSLSLNEDGTPKDTKVH-RNSGLFAIIMAPTRELCKQISVVLEKVLRCAPWLVCTTV 261 Query 112 ---------QSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCR 146 ++R K + AT G + H + G R Sbjct 262 IGGESKKSEKARIRKGVNILIATPGRLAD-HLDNTKVLNVGTVR 304 >sp|Q0UG00|MS116_PHANO ATP-dependent RNA helicase MSS116, mitochondrial OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=MSS116 PE=3 SV=1 Length=550 Score = 233 bits (595), Expect = 8e-67, Method: Composition-based stats. Identities = 101/481 (21%), Positives = 165/481 (34%), Gaps = 61/481 (13%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKA-LIVEPSRELAEQTLNNIKQFKKYID 314 V +K G V + P A L+V P+RELA Q + Sbjct 113 VVQAKTGTGKTVAFLLPAIQNLLAGNMPPRGKVAILVVCPTRELALQIAKECNGVTACLP 172 Query 315 NPKLRELLIIGGVAARDQLSV-LENGVDIVVGTPGRLDDLVSTGKLN--LSQVRFLVLDE 371 K+ GG + L L I+V TPGRLDD++ + + ++ +VLDE Sbjct 173 R-KMECHTAFGGTSRASNLKAFLNGNPTILVATPGRLDDILGEEHVRERFTHLKTVVLDE 231 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 AD +L G++ + ++ +IP Q + SATL +V +++ ++ FP + L Sbjct 232 ADQMLDAGFAPAVKKILRRIP---PKSDGWQGMCFSATLPK-EVLDIAKIVL-FPGFTHL 286 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 V+P ER+ + + +V E + Sbjct 287 --------------TTVDPNEVPTHERVPQYFLSVPNVGQTFAALSALIQEEHKQDPTDF 332 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 +AI+F T L + QF LH Sbjct 333 ----------------KAIVFGTTANGVGLLYDLY-------KHALPQFRVFELHSRMSQ 369 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + +FK+ L +DV RG+D V V+ + LP + YVHR+GR RA + Sbjct 370 PMRTRTTAQFKEATSGILFASDVVGRGMDFPNVGLVVQLGLPSSTEQYVHRVGRTARAGK 429 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 G A+ LV EKE + + + Y + + E E + + Sbjct 430 DGRAV-LVLFEKEAFFPRINRTLPIKPYPVDIAA------------KVPEQEAAITRAFA 476 Query 672 QVEPDIKVPV-DEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLG 730 VE + K F G K+ + V +++ +G Sbjct 477 NVEEEAKAKAYQAFLGYNKTFLKKLQLSTTELVRVANEYSRAMGCPEPPLIEKSTIGKMG 536 Query 731 Y 731 Sbjct 537 L 537 Score = 72.1 bits (175), Expect = 8e-12, Method: Composition-based stats. Identities = 21/97 (22%), Positives = 42/97 (43%), Gaps = 12/97 (12%) Query 4 FSEMG--VMPEIAQAVEEMDWLLPTDIQAESI---PLILGGGDVLMAAETGSGKTGAFSI 58 FSE+ + + +++M + + +Q + + P + D ++ A+TG+GKT AF + Sbjct 71 FSELSSVLDKSLLDGLDKMGFEFMSPVQQKVLTELPSLSS--DCVVQAKTGTGKTVAFLL 128 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 P IQ + +GK I + + Sbjct 129 PAIQNLL----AGNMPPRGKVAI-LVVCPTRELALQI 160 >sp|Q7S873|DBP7_NEUCR ATP-dependent RNA helicase dbp-7 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-7 PE=3 SV=1 Length=814 Score = 239 bits (610), Expect = 9e-67, Method: Composition-based stats. Identities = 107/461 (23%), Positives = 178/461 (39%), Gaps = 48/461 (10%) Query 208 NGKDLGLAFEIPPHM--KNQALFPACVLKNAELKFNFGEEEFKFPPKDGF---VALSKAP 262 N LGL+ + H+ K + P + KN + + + + G +A Sbjct 146 NFLSLGLSRRVSQHLATKLEMKAPTAIQKNTIPQLVKEDSDAFLQAETGSGKTLAYLLPI 205 Query 263 DGYIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 I+ H+ + TK N A+I+ P+REL +Q +++ + P L Sbjct 206 VHRILALSHNEDGTPKTTKVHRNSGLFAIILAPTRELCKQIAVVLEKVLRC--APWLVCT 263 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGY 380 +IGG + + + + + GV+I++ TPGRL D + +T L++ VR+LVLDE D ++ G+ Sbjct 264 TVIGGESKKSEKARIRKGVNILIATPGRLTDHLDNTKVLDVGTVRWLVLDEGDRMMEMGF 323 Query 381 SDFINRMHNQIPQVTSDGK-------------RLQVIVCSATLHSFDVKKLSEKIMHFPT 427 D I + +I T K R ++CSAT+ +V+KL E + Sbjct 324 EDDIKTIVGKIRAGTLQKKNAEGVVLDGVLPSRRVTVLCSATM-KMNVQKLGEISLEDAV 382 Query 428 WVDLKGED--------------SVPDTVHH--VVVPVNPKTDRLWERLGKSHIRTDDVHA 471 + D S P + +V P + L L + R V Sbjct 383 HITASKSDMEKDAETGAVETAFSAPAQLKQAAIVTPAKLRLVTLIALLKSTFARKGSVMK 442 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 A+S + E +K E + TK + +E Sbjct 443 AIIFISCADSVDYHFELLKSTTPRAEPEPKPEGE-------APTKPNIH-IESTVAPATY 494 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINV 590 LHG R L+ F + LI TD+++RG+D+ V VI Sbjct 495 ITSPANPTVMLHKLHGSLAQPVRSATLKAFSECKDPAVLITTDISSRGLDVPAVELVIEY 554 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 ++VHRIGR RA R G A+ + E+ + + Sbjct 555 DPAFAVPDHVHRIGRTARAGRAGKAVLFLLPGSEEGYISIL 595 Score = 68.6 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 32/163 (20%), Positives = 58/163 (36%), Gaps = 21/163 (13%) Query 4 FSEMGVMPEIAQAV-EEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 F +G+ ++Q + +++ PT IQ +IP ++ D + AETGSGKT A+ +P++ Sbjct 147 FLSLGLSRRVSQHLATKLEMKAPTAIQKNTIPQLVKEDSDAFLQAETGSGKTLAYLLPIV 206 Query 62 QIVYETLKDQQEGKKGKTTIKTGAS------VLNKWQMNPYDRGSAFAIGSDGLCC---- 111 + ++ K + + + L C Sbjct 207 HRILALSHNEDGTPKTTKVHRNSGLFAIILAPTRELCKQIAVVLEKVLRCAPWLVCTTVI 266 Query 112 --------QSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCR 146 ++R K + AT G + H D G R Sbjct 267 GGESKKSEKARIRKGVNILIATPGRLTD-HLDNTKVLDVGTVR 308 >sp|Q6BSM3|SPB4_DEBHA ATP-dependent rRNA helicase SPB4 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=SPB4 PE=3 SV=1 Length=614 Score = 235 bits (599), Expect = 9e-67, Method: Composition-based stats. Identities = 96/422 (23%), Positives = 173/422 (41%), Gaps = 70/422 (17%) Query 289 ALIVEPSRELAEQTLNNIKQFKKYI--DNPKLRELLIIGGVA--ARDQLSVLENGVDIVV 344 ++I+ P+RELA+Q + +YI D ++ L++G ++ D L N I++ Sbjct 96 SIILSPTRELAKQIQTVFDKVLEYIPEDKATIKTQLLVGSLSSVREDIDYFLTNKTHILI 155 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL D +S+ + + V VLDEAD LL + + ++ Q+P K+ + Sbjct 156 ATPGRLLDFLSSNYVKTNSVEIAVLDEADKLLDISFERDVIKILKQLP------KQRRTG 209 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS---VPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT+ S + M P + +K ++S P +++ + V P+T Sbjct 210 LFSATISSAG-DTIFRTGMANPVKIVVKSKNSKNAAPTSLNVSYMHVEPET--------- 259 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 K + IK+++ + I++ T + Sbjct 260 -------------------------------KISALIALIKDYRFQKCIVYFPTCTSVKH 288 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV----RFLICTDVAAR 577 F Q ++ ++ LHG R + L+ F +GD L+ TDVAAR Sbjct 289 FYSVF--QTLVNVEEEDRYKFFSLHGQLSTKPRLKTLQNFSEGDSMLHKHVLLTTDVAAR 346 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE-KEKVWYHVCSSRGK 636 GIDI V VI + P + + HR GR GRA ++G AI ++ +E+ + + +G Sbjct 347 GIDIPDVDLVIQLDPPTDPDVFFHRSGRTGRANKVGQAIVMLNNNSREEDYVNFMEVKGM 406 Query 637 GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAA 696 N N ++ + ++ + + ++ + + G V Y K A Sbjct 407 TMSNMEC---------PNISKIHDKFQKKFRKYMLEDRARHELAIKSYVGFVRYYSKHMA 457 Query 697 GG 698 Sbjct 458 SS 459 Score = 94.4 bits (233), Expect = 9e-19, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 9/126 (7%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 + P I +A++ + + T +QA +IPL G DV++ A TGSGKT AF IPV+Q + Sbjct 15 CDLHPWIKEAIKSLGYPTMTPVQASTIPLFSGNKDVVVEAVTGSGKTLAFVIPVLQKLSN 74 Query 67 TLKDQQEGKKGKTTIKTGA------SVLNKWQMNP---YDRGSAFAIGSDGLCCQSREVK 117 L + E + +K G S + +D+ + V Sbjct 75 RLYNIDEEGENPEPVKKGHMLSIILSPTRELAKQIQTVFDKVLEYIPEDKATIKTQLLVG 134 Query 118 EWHGCR 123 R Sbjct 135 SLSSVR 140 >sp|O34750|YFML_BACSU Probable ATP-dependent RNA helicase YfmL OS=Bacillus subtilis (strain 168) OX=224308 GN=yfmL PE=1 SV=1 Length=376 Score = 228 bits (581), Expect = 1e-66, Method: Composition-based stats. Identities = 92/388 (24%), Positives = 162/388 (42%), Gaps = 62/388 (16%) Query 253 DGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 DG ++++P G K+ + + K P+A+I+ PSREL Q I+ +K Sbjct 40 DGKDVIAESPTG-TGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKA- 97 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 +LR +IGG + Q+ L+ I+VGTPGR+ +L+ KL + +V+ +VLDE Sbjct 98 --GSELRAASLIGGANVKKQVEKLKKHPHIIVGTPGRVFELIKAKKLKMHEVKTIVLDET 155 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D L+ + + + ++ + + Q++ SATL + + + ++ P + ++ Sbjct 156 DQLVLPEHRETMKQIIK------TTLRDRQLLCFSATL-KKETEDVLRELAQEPEVLKVQ 208 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + V H + + + Sbjct 209 RSKAEAGKVKHQYLICDQRDKV-------------------------------------- 230 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 ++ + + QA++F R + + H LH + K Sbjct 231 ---KLLQKLSRLEGMQALVFVRDIGNLSVYAEKL---------AYHHVELGVLHSEAKKM 278 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 ER + + F+ G+ L+ TD+AARG+DI +PYVI+ +PDE YVHR GR GRA + Sbjct 279 ERAKIIATFEDGEFPLLLATDIAARGLDIENLPYVIHADIPDE-DGYVHRSGRTGRAGKE 337 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYN 640 G +SLV +E + G Sbjct 338 GNVLSLVTKLEESKLKKMAKKLGVELSE 365 Score = 76.3 bits (186), Expect = 2e-13, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 9/95 (9%) Query 13 IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 I + + PT +Q ++ LI+ G DV+ + TG+GKT A+++PV++ + K Q Sbjct 15 IQENWNASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQ 74 Query 73 EGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + + M + + GS+ Sbjct 75 ---------AVILAPSRELVMQIFQVIQDWKAGSE 100 >sp|P15424|MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MSS116 PE=1 SV=1 Length=664 Score = 236 bits (601), Expect = 1e-66, Method: Composition-based stats. Identities = 97/425 (23%), Positives = 167/425 (39%), Gaps = 42/425 (10%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNA-PKALIVEPSRELAEQTLNNIKQFKKYID 314 +A +K G + TKF KA+IV P+R+LA Q +K+ Sbjct 149 IARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNY 208 Query 315 N-PKLRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLDE 371 K + ++GG R ++ + +IV+ TPGRL D++ V + VLDE Sbjct 209 GLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDE 268 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDG-KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 AD LL G+ D + + + + S ++ ++ SATL V+KL+ IM+ + Sbjct 269 ADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATL-DDKVQKLANNIMNKKECLF 327 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 L D H ER+ +S + + E ++ +I Sbjct 328 LDTVDKNEPEAH--------------ERIDQSVVIS----------------EKFANSIF 357 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 + + +AIIF T L ++ + HG Sbjct 358 AAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSIL------KNEFKKDLPILEFHGKIT 411 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 ++R ++RFKK + L+CTDV ARG+D V V+ + +P E NY+HRIGR R+ Sbjct 412 QNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPSELANYIHRIGRTARSG 471 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + G ++ + ++ + ++ E + E E+ + I Sbjct 472 KEGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVI 531 Query 671 SQVEP 675 S + Sbjct 532 SLISS 536 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 44/103 (43%), Gaps = 7/103 (7%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGG--GDVLMAAETGSGKTGAFSIPVIQIVYE 66 + EI +A+ M++ T +Q ++I IL DV+ A+TG+GKT AF IP+ Q + Sbjct 113 LDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLIN 172 Query 67 TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 T D Q K + + + GL Sbjct 173 TKFDSQYMVK-----AVIVAPTRDLALQIEAEVKKIHDMNYGL 210 >sp|Q56X76|RH39_ARATH DEAD-box ATP-dependent RNA helicase 39 OS=Arabidopsis thaliana OX=3702 GN=RH39 PE=2 SV=2 Length=621 Score = 235 bits (598), Expect = 1e-66, Method: Composition-based stats. Identities = 100/424 (24%), Positives = 172/424 (41%), Gaps = 60/424 (14%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 K P P+ +++ P+REL+EQ K + + R +L+ GG R Q L N + Sbjct 184 KTKPRRPRTVVLCPTRELSEQVYRVAKSISHHA---RFRSILVSGGSRIRPQEDSLNNAI 240 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ--VTSDG 398 D+VVGTPGR+ + G + + +LVLDEAD + +G+ I + + Q + ++ Sbjct 241 DMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGPEIRKFLAPLNQRALKTND 300 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + Q ++ +AT+ + V+KL ++ E Sbjct 301 QGFQTVLVTATM-TMAVQKLVDE-----------------------------------EF 324 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 G H+RT +H K E L+ V K + ++FC T Sbjct 325 QGIEHLRTSTLHKKIANARHDFIKLSGGE--DKLEALLQVLEPSLAKGSKVMVFCNTLNS 382 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK--KGDVRFLICTDVAA 576 ++ Y + +Q S V HG+ +R +NL++FK +GD L+CTD+AA Sbjct 383 SRAVDHYLSE---------NQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAA 433 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 RG+D+ V +V+ P +Y+HR GR R G SLV+ + + + + + Sbjct 434 RGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAMRN 492 Query 637 GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAA 696 L D + I + ++ Q+ K + R+ Sbjct 493 NESLESLTTDNVRRD-----AARTHITQEKGRSVKQIREVSKQRNSRDKPSSSSPPARST 547 Query 697 GGGS 700 GG + Sbjct 548 GGKT 551 Score = 87.1 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 0/96 (0%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E+G+ E+ A++E++ +PT+IQ IP ++ V++ + TGSGKT A+ +P+ Sbjct 111 VENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPI 170 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +Q++ E + + K + + Y Sbjct 171 VQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVY 206 >sp|Q81E85|CSHC_BACCR DEAD-box ATP-dependent RNA helicase CshC OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=cshC PE=2 SV=1 Length=389 Score = 228 bits (580), Expect = 2e-66, Method: Composition-based stats. Identities = 86/410 (21%), Positives = 156/410 (38%), Gaps = 70/410 (17%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP---------N 285 L+ + + FK + A+ +G V ++ T LP Sbjct 6 QPFLQQAWEKAGFKELTEIQKQAIPTILEGQDVIAESPTGTGKTLAYLLPLLHKINPEVK 65 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 P+ +++ P+REL Q ++ K+ ++ +IGG + Q+ L+ ++VG Sbjct 66 QPQVVVLAPTRELVMQIHEEVQ---KFTAGTEISGASLIGGADIKRQVEKLKKHPRVIVG 122 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 +PGR+ +L+ KL + +V+ +V DE D ++ Q + + S + Q++ Sbjct 123 SPGRILELIRMKKLKMHEVKTIVFDEFDQIVKQKMMGAVQDVIK------STMRDRQLVF 176 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ + + + P V + +S V H + + + Sbjct 177 FSATMTKAA-EDAARDLAVEPQLVRVTRAES-KSLVEHTYIICERREKNDY--------- 225 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 VR I +A+ F D + + Sbjct 226 --------------------------------VRRIMHMGDVKAVAFLNDPFRLDEITEK 253 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 K + LH + ER+ + F+ G + L+ TD+AARGIDI + Sbjct 254 L---------KFRKMKAAALHAEASKQEREATMRAFRGGKLEILLATDIAARGIDIDDLT 304 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 +VI++ LPD Y+HR GR GR + G +SLV ++E+ G Sbjct 305 HVIHLELPDTVDQYIHRSGRTGRMGKEGTVVSLVTPQEERKLLQFAKKLG 354 Score = 87.1 bits (214), Expect = 6e-17, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 9/100 (9%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 + P + QA E+ + T+IQ ++IP IL G DV+ + TG+GKT A+ +P++ + Sbjct 4 DMQPFLQQAWEKAGFKELTEIQKQAIPTILEGQDVIAESPTGTGKTLAYLLPLLHKINPE 63 Query 68 LKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 +K Q + + M ++ F G++ Sbjct 64 VKQPQV---------VVLAPTRELVMQIHEEVQKFTAGTE 94 >sp|Q6DRI7|DDX51_DANRE ATP-dependent RNA helicase DDX51 OS=Danio rerio OX=7955 GN=ddx51 PE=2 SV=1 Length=652 Score = 234 bits (597), Expect = 3e-66, Method: Composition-based stats. Identities = 98/445 (22%), Positives = 172/445 (39%), Gaps = 51/445 (11%) Query 260 KAPDGYIVKSQHSGNAQV-------TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 + D + SG +K + +AL V P++ELA+Q N F Y Sbjct 239 RPRDVCVSAPTGSGKTLAFVIPVVQALSKRVVRQVRALAVLPTKELAQQVSNV---FSAY 295 Query 313 IDNPKLRELLIIGGVAARDQLSVLEN--------GVDIVVGTPGRLDDLVSTGK-LNLSQ 363 + L+ ++I G + + + L DIVV TPGRL D ++ +L Sbjct 296 TEGSSLKVVMITGQKSFAAEQTALSEIRGGVSHSMADIVVATPGRLVDHINKNSSFSLQH 355 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQI---PQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 +RFL++DEAD ++ + +++++ + P T + + T S ++ Sbjct 356 LRFLIIDEADRMIDSMHQSWLSQVTKAVYSTPGETHTSVFRRTVPGPITAASLSPPQIPL 415 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 + + F + E +H P+ L + ++ D Sbjct 416 QKLLFSATLTQNPEKLQLLDLHQ------PRLFSSTHSLTDNPAQSQDTFHFPQGLSEYY 469 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 P +S+ K + + K A+ F ++ L GG Sbjct 470 VPCTFSK-----KPLIILHFLLRLKFSPALCFTNSREGAHRLYLLVKLFGG--------V 516 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 P ER++ L+ F+KG + LI TD AARGIDI+GV VIN P + Y+ Sbjct 517 EVAEFSSKLSPGERQKTLKDFEKGKIPLLISTDAAARGIDINGVKCVINYDAPQYIRTYI 576 Query 601 HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 HR+GR RA + GLA + + +EK + + S G G + + L Sbjct 577 HRVGRTARAGKAGLAFTFLLKVQEKRFLKMVSDAGSP----------GIQKQHVHPEALK 626 Query 661 EIEEHLNCTISQVEPDIKVPVDEFD 685 +E ++++ +K ++ Sbjct 627 SMESRYEQVLAELGTIVKEENEKKR 651 Score = 59.8 bits (143), Expect = 6e-08, Method: Composition-based stats. Identities = 29/113 (26%), Positives = 44/113 (39%), Gaps = 22/113 (19%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--------------GDVLMAAETGSGKT 53 G+ P + + ++ +QAE IP IL DV ++A TGSGKT Sbjct 195 GICPTLLRKLQTNGIQSFFPVQAEVIPAILESVGSGLLVGPGGYRPRDVCVSAPTGSGKT 254 Query 54 GAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 AF IPV+Q + + + Q + + SA+ GS Sbjct 255 LAFVIPVVQALSKRVVRQ--------VRALAVLPTKELAQQVSNVFSAYTEGS 299 >sp|Q6BPT8|DBP6_DEBHA ATP-dependent RNA helicase DBP6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP6 PE=3 SV=2 Length=576 Score = 232 bits (591), Expect = 5e-66, Method: Composition-based stats. Identities = 103/473 (22%), Positives = 190/473 (40%), Gaps = 62/473 (13%) Query 220 PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT- 278 +++N A ++ + L + + D + S SG Sbjct 143 KNLRNMGFESAFSVQISVLNLML------KDIERNRLQPDMRGDLLVNASTGSGKTLAYS 196 Query 279 -------QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 QT +P +A+I+ P++ L Q + Q K L + + ++ ++ Sbjct 197 IPIIESLQTVKVPRV-RAIILVPTKPLINQVKTTLNQLSK---GTNLSIVSLKNDLSIKE 252 Query 332 QLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 + L+ N DI+V TPGRL D ++ G ++L +++LV+DEAD LL+Q + ++ + ++ Sbjct 253 EGIKLQTNEPDIIVSTPGRLVDHLTNGYISLKNLQYLVIDEADRLLNQSFQNWCQILISK 312 Query 391 IPQVTSDGKR---------LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 I + T+ +R +Q ++ SATL + D KLS H P + + ++ + + Sbjct 313 IDEFTNIKERNISNSWKLNVQKMIFSATLTT-DAGKLSLLKFHKPRLIIVNNKEQLVN-- 369 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 +P +L KS ++ + + Sbjct 370 EMFSLPATLNEFKLQFGSAKSSLKPLILSK---------------------------FLL 402 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG-DRKPHERKQNLER 560 ++K+ +IF TK + +L + + ++ + R + L+ Sbjct 403 SKNKLANVLIF--TKSNDASLRLSRLLSLIMNKLGSETINIAYINSTNNTTSVRSKILKD 460 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F K + L+ TD+ ARGIDI + VIN LP+ + YVHR+GR RA + G A + Sbjct 461 FSKQTINILVATDLIARGIDILSITDVINYDLPNSSREYVHRVGRTARANQEGFAYNFCF 520 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 + E W+ G ++E T E S +E L+ QV Sbjct 521 GKGEAKWFKKL-MAQVGRSEKNIEELELDTKQLIEDNDESMYKESLDELQQQV 572 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 27/114 (24%), Positives = 50/114 (44%), Gaps = 13/114 (11%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-----------GGDVLMAAETGS 50 A F + + + + M + +Q + L+L GD+L+ A TGS Sbjct 130 AEFQNPPLSSLMIKNLRNMGFESAFSVQISVLNLMLKDIERNRLQPDMRGDLLVNASTGS 189 Query 51 GKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 GKT A+SIP+I+ + +T+K + K + + +N +G+ +I Sbjct 190 GKTLAYSIPIIESL-QTVKVPRVRAIILVPTKPLINQVKT-TLNQLSKGTNLSI 241 >sp|Q1K8F7|CYT19_NEUCR ATP-dependent RNA helicase cyt-19, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cyt-19 PE=1 SV=1 Length=626 Score = 233 bits (593), Expect = 7e-66, Method: Composition-based stats. Identities = 100/443 (23%), Positives = 169/443 (38%), Gaps = 63/443 (14%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGE---EEFKFPPKDGFVALSKAPDGYIVKS 269 G+ +E +++ + PA K+ + G F P +++ PD + Sbjct 92 GMGYENMTEVQSMTISPALKGKDIVAQAKTGTGKTLGFLVPVIQKI--ITQDPD---LAH 146 Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + G + + +A+I+ P+RELAEQ ++ K + +GG Sbjct 147 RFGGK------RARSDDIRAIIISPTRELAEQIGEEARKLVK---GTGIIVQTAVGGTQK 197 Query 330 RDQL-SVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDFINR 386 L + G I+VGTPGRL+DL+S ++ ++ LVLDEAD +L G+++ + + Sbjct 198 NAMLYKTRQQGCHILVGTPGRLNDLLSDSHSGIDAPRLSTLVLDEADRMLEVGFNEELRQ 257 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM--HFPTWVDLKGEDS--VPDTVH 442 + N +P Q ++ SAT+ DV L+ + + +V D D + Sbjct 258 IINYLPDRKVLP--RQTLLYSATIPK-DVVGLARSYIDKNNFEFVQTVKADEVLTHDRIP 314 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 +VP + L I K R Sbjct 315 QYIVPCKGFENIYPAMLEL-----------------------------IEKALNESRTNP 345 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 E +AI+F T + F + + +H + R + + FK Sbjct 346 EALPFKAIVFLPTTAEVIMANAIFKRLQWKFKHIPKTWD---IHSKLTQNARTRAADEFK 402 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 L +DV ARG+D V +VI +P ++ Y+HR+GR GRA + G +V Sbjct 403 NARTGILFSSDVTARGMDFPNVSHVIQTHIPPNREQYIHRLGRTGRANKPGQGWLIVPDI 462 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 + H SR G R E Sbjct 463 E----LHAARSRLPGLPIKRNDE 481 Score = 89.0 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 57/152 (38%), Gaps = 13/152 (9%) Query 1 MAAFSEM---GVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + F+++ GV + +A+ M + T++Q+ +I L G D++ A+TG+GKT F Sbjct 70 VTRFADLAALGVHENVVRAITHGMGYENMTEVQSMTISPALKGKDIVAQAKTGTGKTLGF 129 Query 57 SIPVIQIVYETLKDQQEGKKGKTT-----IKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 +PVIQ + D GK S + + + G+ Sbjct 130 LVPVIQKIITQDPDLAHRFGGKRARSDDIRAIIISPTRELAEQIGEEARKL-VKGTGIIV 188 Query 112 QSREVKEWHGCRATKGLMKGKHYYEVSCHDQG 143 Q+ K +G H + G Sbjct 189 QTAVGGTQKNAMLYKTRQQGCH---ILVGTPG 217 >sp|A6RMZ2|SPB4_BOTFB ATP-dependent rRNA helicase spb4 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=spb4 PE=3 SV=1 Length=626 Score = 233 bits (593), Expect = 7e-66, Method: Composition-based stats. Identities = 91/454 (20%), Positives = 175/454 (39%), Gaps = 79/454 (17%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 + + + ++ + + G ++ V + G + ++ Sbjct 25 VLDAISSMGFEKMTPVQASTIPLFMGNKD--------VVVEAVTGSGKTLSFLIPVVEKL 76 Query 278 TQTKF--LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP------------------- 316 + + + A+IV P+RELA Q + + K+ + Sbjct 77 LRLEEPLKKHHVGAIIVSPTRELATQIHSVLTSLLKFHEPSAEALQPLEEGEKRKPSSTL 136 Query 317 KLRELLIIGGV--AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL--SQVRFLVLDEA 372 ++ L++GG A+D L+N ++++ TPGRL +L+S+ ++ S LVLDEA Sbjct 137 RVIPQLLLGGTTTPAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEA 196 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D LL G+ D + ++ ++P K+ + + SA++ S V ++ + P + +K Sbjct 197 DRLLDLGFKDDLQKILGRLP------KQRRTGLFSASV-SEAVGEIVRVGLRNPVKIAVK 249 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + + L S++ T H Sbjct 250 VKGA------------GGGDKMTPASLQMSYLLTPPTHK--------------------F 277 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 ++ + E ++II+ T D + QF V LHG P+ Sbjct 278 PALLSLLSQLEPTPQKSIIYLSTCAAVDYFQPLL------EAVLPKQFGLVSLHGKHPPN 331 Query 553 ERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R++N ++ L+ TDVAARG+DI V V+ + P + + ++HR GR GRA R Sbjct 332 VRQRNFSKYVAAVSPTILLTTDVAARGLDIPQVDLVVQIDPPSDPKVFLHRCGRAGRAGR 391 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 GL++ + +E+ + R + E Sbjct 392 KGLSVIFLQPGREEDYIPFLEIRKTPITPLKRPE 425 Score = 92.1 bits (227), Expect = 5e-18, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 46/103 (45%), Gaps = 6/103 (6%) Query 2 AAFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 A+ + + + A+ M + T +QA +IPL +G DV++ A TGSGKT +F IP Sbjct 12 RAWDALTPSLAEWVLDAISSMGFEKMTPVQASTIPLFMGNKDVVVEAVTGSGKTLSFLIP 71 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 V++ + +E K S + + ++ Sbjct 72 VVEKLLRL----EEPLKKHHVGAIIVSPTRELATQIHSVLTSL 110 >sp|A7F2S3|SPB4_SCLS1 ATP-dependent rRNA helicase spb4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=spb4 PE=3 SV=1 Length=625 Score = 232 bits (592), Expect = 1e-65, Method: Composition-based stats. Identities = 92/460 (20%), Positives = 179/460 (39%), Gaps = 80/460 (17%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 I +K+ ++ + + G ++ V + G + ++ Sbjct 25 ILDAIKSMGFEKMTPVQASTIPLFMGNKD--------VVVEAVTGSGKTLSFLIPVVEKL 76 Query 278 TQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP------------------- 316 + + + A+IV P+RELA Q + + + + Sbjct 77 LRLEEPIKKHHVGAIIVSPTRELATQIHSVLTSLLAFHEPSAGALKPLEEGEKRKPSSTL 136 Query 317 KLRELLIIGGV--AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL--SQVRFLVLDEA 372 ++ L++GG A+D L+N ++++ TPGRL +L+S+ ++ S LVLDEA Sbjct 137 RVVSQLLLGGTTTPAQDLSRFLKNSPNLLISTPGRLLELLSSPHVHCPQSSFEVLVLDEA 196 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D LL G+ D + ++ +++P K+ + + SA++ S V ++ + P + +K Sbjct 197 DRLLDLGFKDDLQKILSRLP------KQRRTGLFSASV-SEAVGEIVRVGLRNPVKIAVK 249 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 + + D + L S++ T H Sbjct 250 VKGAGGDKMT-------------PASLQMSYLLTPPTHK--------------------F 276 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 ++ + + ++II+ T D + QF+ V LHG P+ Sbjct 277 PALLSLLSQLQPTPQKSIIYLSTCAAVDYFQPLL------EAVLPKQFALVSLHGKHPPN 330 Query 553 ERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R++N ++ L+ TDVAARG+DI V V+ + P + + ++HR GR GRA R Sbjct 331 VRQRNFSKYVAAVSPTILLTTDVAARGLDIPQVDLVVQIDPPSDPKVFLHRCGRAGRAGR 390 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 GL++ + +E+ + R + E Sbjct 391 KGLSVIFLQPGREEDYIPFLEIRKTPITLFKRPEISTTDD 430 Score = 94.0 bits (232), Expect = 1e-18, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 47/103 (46%), Gaps = 6/103 (6%) Query 2 AAFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 A+ + + I A++ M + T +QA +IPL +G DV++ A TGSGKT +F IP Sbjct 12 RAWDALTPSLAEWILDAIKSMGFEKMTPVQASTIPLFMGNKDVVVEAVTGSGKTLSFLIP 71 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 V++ + +E K S + + ++ Sbjct 72 VVEKLLRL----EEPIKKHHVGAIIVSPTRELATQIHSVLTSL 110 >sp|Q4WRP2|MS116_ASPFU ATP-dependent RNA helicase mss116, mitochondrial OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=mss116 PE=3 SV=1 Length=655 Score = 232 bits (592), Expect = 2e-65, Method: Composition-based stats. Identities = 85/411 (21%), Positives = 157/411 (38%), Gaps = 45/411 (11%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 +++ + +A+I+ P+RELAEQ ++ + + +GG R+ L ++ Sbjct 160 RSQASSSDIRAIIISPTRELAEQIAVEARRLAAH---SGVIVQTAVGGTQKREGLRRIQR 216 Query 339 -GVDIVVGTPGRLDDLVST--GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 G +++GTPGRL D++S + + LVLDEAD LL G+SD I + +P Sbjct 217 EGCHVLIGTPGRLKDVLSDSYNGVTAPNLSTLVLDEADRLLDDGFSDAIIDIQRLLPD-- 274 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGEDSVPD--TVHHVVVPVNPKT 452 Q ++ SAT+ +V ++ K M +V +D VP TV V + Sbjct 275 PMKVDRQTLMFSATVP-REVMQMVRKTMKPNFKFVKTVRDDEVPTHLTVPQKYVILRGYE 333 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 + + L + N RP +AI++ Sbjct 334 NAMPALLEFVTKYVEGEKENPNQRPF-----------------------------KAIVY 364 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 + + + + + F + +H R ++ + F+ L + Sbjct 365 FNSTVQTNLVYETFRNIVEQRHHPLRRVRVYEIHSQLTQARRTRSSDFFRAAKSAILFSS 424 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 DV ARG+D V +VI V++P ++ Y+HR+GR RA + G L + + Sbjct 425 DVTARGMDFPDVTHVIQVSIPRDRATYIHRLGRTARANKTGEGWVLTHRGELPEFLKQLE 484 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE-HLNCTISQVEPDIKVPVD 682 N + T+ + +L + I ++ + Sbjct 485 GIP---LNLDKETFATATVDMTKPELDPKSPATRFIQEIKDAVREVPESLK 532 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 14/133 (11%) Query 1 MAAFSEMG----VMPEIAQAV-EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGA 55 + F+++ V P+I +A+ ++M+ TD+Q++++ IL G DVL A+TG+GKT A Sbjct 79 LREFTDLAERGLVDPKIIRAIVKDMNIKTMTDVQSQTLREILQGDDVLAQAKTGTGKTLA 138 Query 56 FSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSRE 115 F PV Q + +KD + +S + ++P ++ + ++R Sbjct 139 FLTPVFQNI---MKDPSLKGLNWRRSQASSSDIRAIIISPTREL------AEQIAVEARR 189 Query 116 VKEWHGCRATKGL 128 + G + Sbjct 190 LAAHSGVIVQTAV 202 >sp|Q754J2|DBP7_EREGS ATP-dependent RNA helicase DBP7 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP7 PE=3 SV=1 Length=710 Score = 233 bits (593), Expect = 3e-65, Method: Composition-based stats. Identities = 101/460 (22%), Positives = 166/460 (36%), Gaps = 52/460 (11%) Query 225 QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG----YIVKSQHSGNAQVTQT 280 Q F A ++ L+ G+ + + P K +A+ + +G ++ SG Sbjct 133 QDTFEALGVRGTLLEHLTGKMKIQKPTKIQKMAIPEVLNGKADLFLHAQTGSGKTLAFLL 192 Query 281 KFLP------------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 L + A+IV P+RELA Q I + L L++GG Sbjct 193 PVLQTLLSLEQRIDRHSGCFAMIVTPTRELAAQIYGVISTLAQCC--HYLVPCLLVGGER 250 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFI 384 + + + L G + +VGTPGR+ D + K+ +R+L+LDE D L+ G+ + + Sbjct 251 KKSEKARLRKGANFIVGTPGRMLDHLQNTKVAREQLPHSLRYLILDEGDKLMELGFEETL 310 Query 385 NRMHNQIPQVTSDG-------KRLQVIVCSATLHSFDVKKLSEKIMHFPTWV----DLKG 433 + + V D +R+ ++CSAT V KL + + P + Sbjct 311 KSILEIVHSVACDNTRFPRLPQRIVHVLCSAT-RQGTVSKLGDIALTDPKVIAASDSTTD 369 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 +VPD + + V PK RL + + TR S Sbjct 370 VSTVPDQLLQKIAIVPPKL-RLVTLCAAISELSRKAPTETTTRTIVFISCADSVDFHYDV 428 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + ++ L LHG Sbjct 429 FSGLGGSHRDLVPG----------TVRELAAGSRALPCFSADSPPNTVFYKLHGSLPQAV 478 Query 554 RKQNLERFKK------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 R L F G L CTDVA+RG+D+ V VI + P ++++HRIGR Sbjct 479 RVATLRHFSSDAAATRGKHLVLFCTDVASRGLDLPRVSTVIEMDPPFAVEDHLHRIGRTA 538 Query 608 RAERMGLAISLVAT-EKEKVWYHVCSSRGKGCYNTRLKED 646 RA G ++ + E+E H+ + +G R D Sbjct 539 RAGVAGESLLFLLPGEEEGYMEHIRAHHPRGWELLRYDRD 578 Score = 80.6 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 46/103 (45%), Gaps = 5/103 (5%) Query 3 AFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPV 60 F +GV + + + +M PT IQ +IP +L G D+ + A+TGSGKT AF +PV Sbjct 135 TFEALGVRGTLLEHLTGKMKIQKPTKIQKMAIPEVLNGKADLFLHAQTGSGKTLAFLLPV 194 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 +Q + +Q + + + Y S A Sbjct 195 LQTLLSL---EQRIDRHSGCFAMIVTPTRELAAQIYGVISTLA 234 >sp|P75172|Y623_MYCPN Probable ATP-dependent RNA helicase MG425 homolog OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=MPN_623 PE=3 SV=1 Length=450 Score = 226 bits (576), Expect = 4e-65, Method: Composition-based stats. Identities = 80/353 (23%), Positives = 138/353 (39%), Gaps = 55/353 (16%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 K + L+V P+RELAEQ F K+ L+ + +IGG+ QL LEN Sbjct 68 KPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTH---LKVVSLIGGIPIWQQLKQLENQP 124 Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 +IVVGT GR+ DL+ G + + L++DE D +L +G+ + + ++I K Sbjct 125 EIVVGTMGRVMDLLERGVIKFEHLEHLIIDEVDLMLDRGFKRKLFDLLSRI------EKF 178 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 Q+ V SA+ + ++ + G + + K Sbjct 179 EQIAVYSASYNEETIE--------TAKQITKNGIFLAAPELKQNAPEPDNKL-------- 222 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + K + + + + I+FC TK D Sbjct 223 --------------------IDQFVCYLFSNRKKQALYSLVSQTRAKSIIVFCDTKKLVD 262 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF-LICTDVAARGI 579 L + + + LHGD+ R++NL+ F L+ TD+ RGI Sbjct 263 ELCIFL---------RKNDVKTYPLHGDKAQFIRERNLKLFANTTAPIVLVTTDLIGRGI 313 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 + GV V+N + + Y+HR+GR GR G I+ + +++ + + Sbjct 314 HVEGVDMVVNYSACVNFETYLHRMGRTGRNNHKGSCITFCTSHEKQAFLKLLE 366 Score = 84.0 bits (206), Expect = 9e-16, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 49/107 (46%), Gaps = 9/107 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F+E+GV P + +++ + PT IQ +IP L ++++ + TG+GKT F IPVI Sbjct 3 STFNELGVSPALIATLKDNNINQPTTIQQLAIPQFLQHQNLIVHSPTGTGKTAVFGIPVI 62 Query 62 QIVYETLKDQQEGKKGKTTIKTGAS-VLNKWQMNPYDRGSAFAIGSD 107 + + + K K T +T + FA + Sbjct 63 ETLLK--------KPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTH 101 >sp|Q8GUG7|RH50_ARATH DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana OX=3702 GN=RH50 PE=2 SV=2 Length=781 Score = 234 bits (596), Expect = 5e-65, Method: Composition-based stats. Identities = 112/495 (23%), Positives = 185/495 (37%), Gaps = 76/495 (15%) Query 159 GTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDT--IGCYLD--IDKGHVKFSKNGKDLGL 214 G+D G+G + + D++ E DT G + + Sbjct 333 GSDTNSRGWGDRRSVVYTRDMDDWRERNKTKDTRETGFFSRKTFAEIGCSEDMMKALKEQ 392 Query 215 AFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN 274 F+ P H++ A P K+ + ++ G + Sbjct 393 NFDRPAHIQAMAFSPVIDGKSCIIA-------------------DQSGSGKTLAYLVPVI 433 Query 275 AQVTQ------TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 ++ + +K P P+ +++ P+ ELA Q L N + K R +++ GG Sbjct 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISK--SGVPFRSMVVTGGFR 491 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRM 387 R QL LE GVD+++ TPGR L++ G L LS +R +LDE D L + + + Sbjct 492 QRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNL 551 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 N P Q + +ATL P + K + PD V Sbjct 552 INSSPVTA------QYLFVTATL---------------PLEIYNKLVEVFPD----CEVV 586 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + P+ R+ L + + G ++ E E K ++ ++E+ + Sbjct 587 MGPRVHRVSNALEEFLVDC----------SGDDNAEKTPETAFQNKKTALLQIMEENPVS 636 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 + IIFC C +E F + D+K Q + H R N++ F Sbjct 637 KTIIFCNKIETCRKVENIFKR----VDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPE 692 Query 568 ----FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER-MGLAISLVATE 622 FL+CTD A+RGID GV +V+ P + YV R+GR R R G A V + Sbjct 693 ENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGARGKGKAFIFVVGK 752 Query 623 KEKVWYHVCSSRGKG 637 + + + KG Sbjct 753 QVGLARRIIERNEKG 767 Score = 78.6 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 64/175 (37%), Gaps = 17/175 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+E+G ++ +A++E ++ P IQA + ++ G ++A ++GSGKT A+ +PVI Sbjct 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 Q + E + + + R + G Sbjct 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPF----RSMVVTGG 489 Query 122 CRATKGLMKGKHYYEVSCHDQG----LCR---VGWSTMQA------SLDLGTDKF 163 R L + +V G L +G S ++ + G D+F Sbjct 490 FRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEF 544 >sp|Q0E2Q3|IF4A2_ORYSJ Putative eukaryotic initiation factor 4A-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0221300 PE=3 SV=2 Length=416 Score = 224 bits (571), Expect = 7e-65, Method: Composition-based stats. Identities = 86/406 (21%), Positives = 162/406 (40%), Gaps = 72/406 (18%) Query 245 EEFKFPPKDGFVALSKAPD----GYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 ++ + G V L D + + + + +AL++ P+ +LA Sbjct 69 DKPSAVHQRGIVPLCNGLDIIQQSLFGTTVTLCCGILQRLDYASTECQALVLVPTHDLAH 128 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 +T N I +++ + GG +A + +L GV + VGTP + ++ L Sbjct 129 ETQNVIGVLGQFLSA---KAHAFCGGTSAHEDQQILSTGVQVAVGTPCHVLGMLQGRALC 185 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 +R VLDEAD +L +G+ D I+ + +P T Q SA++ S + ++ Sbjct 186 PDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKT------QFGFFSASM-SHEALEMCR 237 Query 421 KIMHFPTWVDLKGEDSVPD-TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 K M+ P + + ++ + V V V + +L Sbjct 238 KYMNKPVEIIVPRDEELEGINVKQFYVNVEKEDCKL------------------------ 273 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 + ++ ++IIF T+ +L + +G Sbjct 274 ---------------DKLCGLFDTMEITRSIIFVNTRHHAKSLTEKIRGKG--------- 309 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 ++ +HG R + ++ F+ G R LI TD+ RGID+ P I LP + Y Sbjct 310 YTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL--RGIDVLRAPAAIFYDLPTQPVCY 367 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 + + + G+ R G+AIS + + E+V+ S+ K C NT+++E Sbjct 368 LRHV-QSGQHGRKGVAISFITSTDERVF----STIQKFC-NTQIEE 407 >sp|Q6FU81|MS116_CANGA ATP-dependent RNA helicase MSS116, mitochondrial OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=MSS116 PE=3 SV=1 Length=666 Score = 231 bits (588), Expect = 1e-64, Method: Composition-based stats. Identities = 90/440 (20%), Positives = 173/440 (39%), Gaps = 61/440 (14%) Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFL-PNAPKALIVEPSRELAEQTLNNIKQF-KKY 312 +A +K G + TK N K++IV P+R+LA Q + +++ K Sbjct 201 IIARAKTGTGKTFAFLLPIFQHLLNTKIDSQNKVKSVIVAPTRDLALQIEDEVRKIHSKN 260 Query 313 IDNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVST-GKLNLSQVRFLVLD 370 + ++GG + +E IV+GTPGRL D++ G V F VLD Sbjct 261 RKLKAFECVSLVGGTNFDRSIRYIEKVSPSIVIGTPGRLIDVMEKFGNKFFKDVDFKVLD 320 Query 371 EADGLLSQGYSDFINRMHNQIPQV-TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 EAD LL G+ + ++ ++ + + T+ + ++ ++ SATL V+ LS IM+ + Sbjct 321 EADRLLEIGFKEDLSYINKMLNTLNTNSTEHIRTLLFSATL-DHKVQSLSNDIMNKEECL 379 Query 430 DLK----GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + E + + +V D L+ + Sbjct 380 YIDTIDENEPQAHEKIDQTLVVGETFADNLYAAI-------------------------- 413 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 E+ + ++I+F T + +Q + Sbjct 414 ---------EHIREFGTKTPNYKSILFLPTVKFTKFMATILKRQ--------VKLPIYEF 456 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG +R + + FK L+CTDV ARG+D + V+ + LP E NY+HRIGR Sbjct 457 HGQIDQKKRTRIVNEFKTMKKGLLVCTDVGARGMDFPNITEVLQIGLPSEIPNYIHRIGR 516 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 R+ + G +++ ++ E+ + + N R + + +++++ Sbjct 517 TARSGKEGSSVTFISKEELPFFEILEDKHNVTIKNIR--------KFEAQPHVMADLSLR 568 Query 666 LNCTISQVEPDIKVPVDEFD 685 L+ + +++ I + + Sbjct 569 LHVSEDELQEIILSVISFYR 588 Score = 82.1 bits (201), Expect = 9e-15, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 42/103 (41%), Gaps = 7/103 (7%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGD--VLMAAETGSGKTGAFSIPVIQIVYE 66 + ++ ++ M + T +Q ++I I+ D ++ A+TG+GKT AF +P+ Q + Sbjct 166 ISRDLYDSISRMGFEQLTPVQQKTIEPIITNSDSDIIARAKTGTGKTFAFLLPIFQHLLN 225 Query 67 TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 T D Q K + + D + L Sbjct 226 TKIDSQNKVK-----SVIVAPTRDLALQIEDEVRKIHSKNRKL 263 >sp|Q4HVW2|SPB4_GIBZE ATP-dependent rRNA helicase SPB4 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SPB4 PE=3 SV=1 Length=637 Score = 230 bits (586), Expect = 1e-64, Method: Composition-based stats. Identities = 83/377 (22%), Positives = 152/377 (40%), Gaps = 67/377 (18%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN--------------------PKLRELL 322 + A+IV P+RELA Q + + ++ + P + L Sbjct 84 KKHHVAAIIVSPTRELAAQIHTVLMKLLQFHEASAEILPHLKDDDEKRPFTTVPAIVPQL 143 Query 323 IIGGVA--ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL--SQVRFLVLDEADGLLSQ 378 ++GG +D L + ++++ +PGRL +L+S+ ++ S LVLDEAD LL Sbjct 144 LVGGTTTTVQDLRFFLRHSPNVLISSPGRLVELMSSPHVHCPQSSFEVLVLDEADRLLDL 203 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 G+ + ++ + +P K+ + + SA++ S V ++ + P +++K + Sbjct 204 GFKPDLQKILSHLP------KQRRTGLFSASV-SEAVGEIIRVGLRNPVKIEVKVK---- 252 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 I+ + T M A + L + Sbjct 253 -------------------------IKGGGILEDRKTPASLQMTYMVKPASQKLPALAEL 287 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + ++I+F T D + P F+ V LHG R++N Sbjct 288 LRQLPVRPQRSIVFLSTCAAVDYFQHIL------PLILPEGFALVPLHGKHAAKVREKNF 341 Query 559 ERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAIS 617 +F L+ TD+AARG+DI V V+ + P + + ++HR GR GRA R GLA+ Sbjct 342 NKFLSSVSPTILLTTDLAARGLDIPQVDLVVQIDAPSDPKVFIHRSGRAGRAGRKGLAVV 401 Query 618 LVATEKEKVWYHVCSSR 634 ++ +E+ + R Sbjct 402 MLHPGREEDYVQFLEIR 418 Score = 89.8 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 42/103 (41%), Gaps = 6/103 (6%) Query 2 AAFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 A+ + + I AV M + T +QA ++P +G DV++ A TGSGKT AF IP Sbjct 12 RAWDTLNPPLSEWIRDAVATMGFDQMTPVQAATLPHFMGNKDVVVEAVTGSGKTLAFLIP 71 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 ++Q + E K S + + Sbjct 72 LVQKLLRL----SEPTKKHHVAAIIVSPTRELAAQIHTVLMKL 110 >sp|Q75AE1|ROK1_EREGS ATP-dependent RNA helicase ROK1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=ROK1 PE=3 SV=1 Length=569 Score = 228 bits (580), Expect = 1e-64, Method: Composition-based stats. Identities = 107/516 (21%), Positives = 196/516 (38%), Gaps = 80/516 (16%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPP 251 IG + D+ L + ++ ++ + + Sbjct 118 IGSFEDLVTR----------FKLDKRLLSNLIENNFTEPTPIQCEAIPISL--------Q 159 Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 VA + G + QV K + K LI+ P++ELA Q + + + Sbjct 160 NRDIVACAPTGSGKTLAFLIPLLQQVISDKAVGTGVKGLIISPTKELANQIFDECSKLAQ 219 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGV------DIVVGTPGRLDDLVSTGKLNLSQVR 365 I K R L + + ++ + L+N + DI++ TP RL D+V + L+LS V+ Sbjct 220 RIFLEKKRPLSV--ALLSKSLAAKLKNQIVSDKKYDIIISTPLRLIDIVKSESLDLSAVK 277 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 +L+ DEAD L + + + + + + + ++ SATL S V++L++ IM Sbjct 278 YLIFDEADKLFDKTFVEQTDDILSACSH-----PNISKVLFSATLPS-SVEELAQSIMTD 331 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P V + +++ + +V + +L V + + G P Sbjct 332 PVRVIIGHKEAANTNIEQKLVFCGNEEGKL-------------VAIRQLIQEGMFRP--- 375 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 IIF + L + + + + Sbjct 376 ----------------------PVIIFLESITRAKALFHELLYD---------KLNVDVI 404 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 H +R +R++ +ERFK GD+ LICTDV ARGID G+ VIN +P Q YVHRIGR Sbjct 405 HAERTQVQREKIIERFKSGDLWCLICTDVLARGIDFKGINLVINYDVPRSAQAYVHRIGR 464 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 GR R G A++ + + + + + + E +++ + + Sbjct 465 TGRGGRKGTAVTFFTKQDAIAVKPIVNVMKQSGCEVAAWMENIAKMTKREKEMIKKGKAF 524 Query 666 LN-CTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGS 700 ++ IS V +K + + +KR + Sbjct 525 VDRKQISTVPKILKQKKRQQKEMIEASKKRKLAQQA 560 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 10/110 (9%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F ++ + + + E ++ PT IQ E+IP+ L D++ A TGSGKT AF Sbjct 118 IGSFEDLVTRFKLDKRLLSNLIENNFTEPTPIQCEAIPISLQNRDIVACAPTGSGKTLAF 177 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 IP++Q V + K G KG S + +D S A Sbjct 178 LIPLLQQVI-SDKAVGTGVKG-----LIISPTKELANQIFDECSKLAQRI 221 >sp|Q6CQA1|MS116_KLULA ATP-dependent RNA helicase MSS116, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=MSS116 PE=3 SV=1 Length=685 Score = 230 bits (586), Expect = 2e-64, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 166/404 (41%), Gaps = 51/404 (13%) Query 246 EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL-PNAPKALIVEPSRELAEQTLN 304 + ++ VA +K G + + TK P A KA+IV P+R+LA Q + Sbjct 170 KPILTTENDVVAKAKTGTGKTLAFLAPLFQHLISTKLQNPLAVKAVIVTPTRDLAIQIAS 229 Query 305 NIKQFKKYIDNPK-LRELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVST-GKLNL 361 +K+ ++ + K R L +IGG L L +I+VGTPGR++D++ G Sbjct 230 EVKKLQQCNPSLKSYRSLTLIGGTNLDKSLKDLHTLNPNIIVGTPGRINDILDRVGAKYF 289 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG-KRLQVIVCSATLHSFDVKKLSE 420 V F VLDEAD LL G+ ++ + ++ + + G + ++ ++ SAT+ +V++L+ Sbjct 290 KDVDFKVLDEADTLLQIGFQTELSLISRKLNEFNTQGEEHIRTLLFSATM-DHNVQELAA 348 Query 421 KIMHFPTWVDL----KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 IM+ + + K + D++ +V + + + Sbjct 349 TIMNKKDCLFIDTVDKNDSEAHDSIDQKLVITKSFAESMVALIQSIESE----------- 397 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 + + K +AI+F T D + + Sbjct 398 ------------------------LLQKKNFKAILFLPTVKFVDFFSETLSE------SL 427 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 + + HG +R + ++RFKK + +CTDV ARG+ V +V + +P Sbjct 428 TKRIDIIKFHGKIDQKKRTKLVDRFKKTNHGIFVCTDVGARGMHFPSVEHVYQLCVPTSL 487 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 NY+HRIGR RA G A + E+ K + N Sbjct 488 PNYIHRIGRTARAGESGAATIFLFREELKFVDELRRDTNVVIKN 531 Score = 71.3 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 6/99 (6%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 E + + +A+ M + T +Q +I P++ DV+ A+TG+GKT AF P+ Q Sbjct 141 EESLLDANVHKAISAMKFESLTPVQQRTIKPILTTENDVVAKAKTGTGKTLAFLAPLFQH 200 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + T + + + + Sbjct 201 LIST-----KLQNPLAVKAVIVTPTRDLAIQIASEVKKL 234 >sp|Q76PD3|DBP6_SCHPO ATP-dependent RNA helicase dbp6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp6 PE=2 SV=1 Length=604 Score = 228 bits (581), Expect = 3e-64, Method: Composition-based stats. Identities = 94/442 (21%), Positives = 162/442 (37%), Gaps = 74/442 (17%) Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-------NAPKALIVEPSRE 297 S D + + SG + + +++ P+RE Sbjct 157 LPLLLQDGRHGPMYSYGGDVCVSAATGSGKTLSYVIPIVQCLSHRTVPRLRCVVIVPTRE 216 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-----ENGVDIVVGTPGRLDD 352 L Q K F+ Y+ L+ G + R + L E +D++V TPGRL D Sbjct 217 LTVQV---AKTFEYYMSGAGLQVCAWTGQKSLRHETYQLNGDENECRIDVLVSTPGRLVD 273 Query 353 LV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI--PQVTSDGKR--------- 400 + + +L +R++V+DEAD LL Q + D+++ + +I P+ + Sbjct 274 HIRNDESFSLQHLRYMVIDEADRLLDQSFQDWVDTVMMEISHPKCLQNKSNILDLDQNIS 333 Query 401 ------------------LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 LQ +V SATL + D K++ +H P V ++ +D D Sbjct 334 PTFLPDIDTLLPYRLPSPLQKLVFSATL-TRDPSKIASLKLHNPRLVLVQNKDMEVDD-- 390 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 ++ + + + ++ K I Sbjct 391 -----------------------GGEIEDDAIVFSVPPTLQEYHVSVSSEKPILLYHLIH 427 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + + F ++ L + + FSC ERK+ + RF Sbjct 428 SKNLTNILCFVKSNEAAARLHRLLEL---IHESLNQSFSCGLFTSSLSRDERKKIISRFA 484 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 GD+ L+C+D+ ARGID+ VIN P ++YVHRIGR RA R G A +LV + Sbjct 485 TGDLNLLVCSDLMARGIDVANTQNVINYDPPLSVRSYVHRIGRTARAGREGFAWTLVQSH 544 Query 623 KEKVWYHVCSSRGKGCYNTRLK 644 + + + + R+K Sbjct 545 EGHHFSKLVKQLRRTLPIKRIK 566 Score = 64.0 bits (154), Expect = 3e-09, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 47/118 (40%), Gaps = 18/118 (15%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG----------GGDVLMAAETGSGKT 53 FS + + ++ + +++ + +QA +PL+L GGDV ++A TGSGKT Sbjct 128 FSSLNISSKLVERLQKQNITRGFAVQAAVLPLLLQDGRHGPMYSYGGDVCVSAATGSGKT 187 Query 54 GAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 ++ IP++Q + + + + + G+ C Sbjct 188 LSYVIPIVQCLSH--------RTVPRLRCVVIVPTRELTVQVAKTFEYYMSGAGLQVC 237 >sp|Q6H874|RH47A_ORYSJ DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0636300 PE=2 SV=1 Length=573 Score = 227 bits (578), Expect = 4e-64, Method: Composition-based stats. Identities = 105/478 (22%), Positives = 182/478 (38%), Gaps = 48/478 (10%) Query 200 KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 + +K+ ++LGL + + + L +++A + K V S Sbjct 124 DESLFSAKSFEELGLPPLLIDRLNKEGLTAPTEVQSAAIP--------IISQKHDAVIQS 175 Query 260 KAPDGYIVKSQHSGNAQV--------TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 G + +++ + + +A+IV PSREL Q + +++ Sbjct 176 YTGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILG 235 Query 312 YIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 D +++ ++GG Q L+ N IVVGTPGR+ ++ + GKL+ RFLVLD Sbjct 236 PNDKRLVQQ--LVGGANRSRQEEALKKNKPIIVVGTPGRISEISAAGKLHTHSCRFLVLD 293 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKR-----------LQVIVCSATLHSFDVKKLS 419 E D LLS Y + ++R+ + + + R Q I+ SAT+ F V + + Sbjct 294 EVDQLLSFNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIP-FSVIRAA 352 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 H P V V + V + S + + A D+ P Sbjct 353 RSWGHDPVLVR------AMSVVPLESITVPRPVLSQPDANSNSPSNSVNQAAVDSLPPSL 406 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 S+A K + R I + I F ++ +G Sbjct 407 EHYYCTSKAQH--KVDTLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARG--------- 455 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY 599 LHGD R L++FK G+ R L+ +++ARG+D+ VIN+ LP + +Y Sbjct 456 MKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELSARGLDVPECDLVINLDLPTDSTHY 515 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 HR GR GR R G +++ + V + E +++ Sbjct 516 AHRAGRTGRLGRKGTVVTICEETETFVVRKMRKQLAVPIKPCEFTEGKLLVHKEEDVE 573 Score = 89.8 bits (221), Expect = 2e-17, Method: Composition-based stats. Identities = 29/133 (22%), Positives = 55/133 (41%), Gaps = 3/133 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G+ P + + + PT++Q+ +IP+I D ++ + TGSGKT A+ +P++ Sbjct 131 KSFEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPIL 190 Query 62 QIV--YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW 119 + + +Q K + + M +D Q V Sbjct 191 SEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQL-VGGA 249 Query 120 HGCRATKGLMKGK 132 + R + L K K Sbjct 250 NRSRQEEALKKNK 262 >sp|P47664|Y425_MYCGE Probable ATP-dependent RNA helicase MG425 OS=Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37) OX=243273 GN=MG425 PE=3 SV=1 Length=449 Score = 223 bits (568), Expect = 5e-64, Method: Composition-based stats. Identities = 85/389 (22%), Positives = 155/389 (40%), Gaps = 57/389 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 +F + + S G ++ K A L++ P+REL EQ Sbjct 35 PQFLSEKNLIVHSPTGTGKTAAFAIPIIEKL--LKEDQTAKPTLVIAPTRELVEQIKTTF 92 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 K N KLR + +IGGV A Q+ ++ I+VGT GR+ DL+ ++ S + Sbjct 93 SNIAK---NKKLRIISLIGGVPAWKQIKKIKTNPQIIVGTMGRIMDLLERKAIHFSDLEH 149 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 L++DE D +L +G+ I + QI Q+ V SA+ + + ++++I + Sbjct 150 LIIDEVDLMLDRGFKKQIFNLLEQINSFK------QIAVYSASYNQEAIN-IAKQITNNG 202 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 ++ + + + NT + Sbjct 203 IFI-----------------------------------GSPEFNKDANTNNDKLIKQFVC 227 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 K + IK ++ I+FC TK D+L + + ++ LH Sbjct 228 YLFSDQKKQALYSLIKTAQVKSIIVFCDTKKLVDDLHVFL---------RKNELRTFALH 278 Query 547 GDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 GD+K R++NL+ F L+ TD+ RGI + + VIN + + Y++R+GR Sbjct 279 GDKKQFIRERNLKIFANTKQPTILVTTDLIGRGIHVEAIDMVINYSACLNLEAYINRMGR 338 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSR 634 GR G ++ ++++KV+ + Sbjct 339 TGRNNHKGTCVTFCTSQEKKVFLKMVEKI 367 Score = 87.1 bits (214), Expect = 9e-17, Method: Composition-based stats. Identities = 34/142 (24%), Positives = 59/142 (42%), Gaps = 13/142 (9%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 + F E+G+ + + + + PT IQ SIP L ++++ + TG+GKT AF+IP+I Sbjct 3 STFHELGISQTLIETLNALHINKPTKIQQISIPQFLSEKNLIVHSPTGTGKTAAFAIPII 62 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 + + LK+ Q K + + S A + R + G Sbjct 63 EKL---LKEDQTAKPT-----LVIAPTRELVEQIKTTFSNIAKN-----KKLRIISLIGG 109 Query 122 CRATKGLMKGKHYYEVSCHDQG 143 A K + K K ++ G Sbjct 110 VPAWKQIKKIKTNPQIIVGTMG 131 >sp|A5DTK7|MS116_LODEL ATP-dependent RNA helicase MSS116, mitochondrial OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=MSS116 PE=3 SV=1 Length=692 Score = 229 bits (584), Expect = 5e-64, Method: Composition-based stats. Identities = 97/448 (22%), Positives = 181/448 (40%), Gaps = 67/448 (15%) Query 247 FKFPPKDGFVALSKAPDG----YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQT 302 + G V +K G +++ + S ++ + + +I+ P+R+LA Q Sbjct 163 PLLETERGMVCRAKTGTGKTLTFLIPTLQSAVSRKIASGGRSSGVDTVIIVPTRDLALQI 222 Query 303 LNNIKQFKKYIDNPKL-RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN- 360 + ++ + I + +IGG+ N +IV+ TPGRL+ + + Sbjct 223 YDEYQKVLRGISGSRKPHISYVIGGM---KNSFNPRNPSEIVIATPGRLEADLRSPLFAS 279 Query 361 -LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG-KRLQVIVCSATLHSFDVKKL 418 + +++ V DEAD LL G+ ++ + I + SD + L+ ++ SAT+ + + Sbjct 280 AFTDIKYRVYDEADRLLDVGFEPTLDSIDRSIKMIRSDDAEPLKSLLFSATVDARLDQFA 339 Query 419 SEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 + I +++ ED V + +H V+ D+ Sbjct 340 KQHINKKYDYINTVPEDDPEVHENIHQVMYKCKDAIDKFGSFFN---------------- 383 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 Y + +K+ + ++F T+ + L Y + D Sbjct 384 -------------------YVNQLVKDSPDMKMMVFLPTQTAVEFLYSYMSEACHKHDV- 423 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 LHG R +R++ L FK+ D LI TDVAARGID+ GV +V+ + E Sbjct 424 --DIDIFHLHGKRSASQRQRALSNFKRDDSGILITTDVAARGIDVKGVTHVVQLFPSSEI 481 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM 656 +YVH++GR GRA + G A+ + + + S RG + + ++ Sbjct 482 ADYVHKVGRTGRAGKEGKAVLFITQPEMAYVRRLNSERG---------------VTFEQV 526 Query 657 QLLSEIEEHLNCTISQVEPDIKVPVDEF 684 SEI+ ++ + PD +V D F Sbjct 527 HESSEIDNSIDF-FEGMRPDEQVANDFF 553 Score = 75.6 bits (184), Expect = 8e-13, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 4/107 (4%) Query 4 FSEMGVMPE-IAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSIPVI 61 F G++ + I +A++ + T IQ +SI PL+ ++ A+TG+GKT F IP + Sbjct 131 FKNTGLIDDVILRALDRAHFKDLTPIQQKSIVPLLETERGMVCRAKTGTGKTLTFLIPTL 190 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDG 108 Q + G + + YD G G Sbjct 191 QSAVS--RKIASGGRSSGVDTVIIVPTRDLALQIYDEYQKVLRGISG 235 >sp|A3LSJ2|DBP6_PICST ATP-dependent RNA helicase DBP6 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP6 PE=3 SV=2 Length=591 Score = 226 bits (577), Expect = 7e-64, Method: Composition-based stats. Identities = 94/480 (20%), Positives = 189/480 (39%), Gaps = 57/480 (12%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 SK + ++ + +++ A ++ A + K + D Sbjct 152 SKPFSEFEISPFLLKNLERDNFTTAFSVQIAIMDILL------HDIKRNRLEPDVKGDIL 205 Query 266 IVKSQHSGNAQVTQTKFLP-------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 + + SG + +A+++ P++ L Q Q + L Sbjct 206 VNAATGSGKTLAYSIPIIEALHNRVVPRVRAIVLVPTKPLINQVKATFVQLSR---GTNL 262 Query 319 RELLIIGGVAARDQ-LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 + + V+ +++ + ++ + DI+V TPGRL + +S +NL+ ++FLV+DEAD LL+ Sbjct 263 SVVSLRNDVSIKEEGIKIVNSPPDIIVSTPGRLVEHISNKSINLNSLQFLVIDEADRLLN 322 Query 378 QGYSDFINRMHNQIPQVTSDGKRL----QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 Q + ++ + + + + + Q ++ SATL + D KLS P V + Sbjct 323 QSFQNWCQVLISSLEGDVNIAEEWKITPQKLIFSATLTT-DSGKLSALKFQKPRLVIVND 381 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 + + + +V ++ T + + I Sbjct 382 RKQLVNEIFNVPSSLSEYTIQF-----------------------------GTAKASIKP 412 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 A ++ +K+ +IF ++ L + G K + ++ Sbjct 413 LILAKYLLENNKLSNVLIFTKSNEASIRLCKLLELMFG---KLHPSMNIAYINSTNNKSA 469 Query 554 -RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 R + L+ F + L+ TD+ ARGIDI + VIN LP+ + YVHR+GR RA + Sbjct 470 IRTKILKDFSTQKINILVATDLIARGIDILSITDVINYDLPNSSREYVHRVGRTARANQT 529 Query 613 GLAISLVATEKEKVWY-HVCSSRGKG-CYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 G A +L + E W+ + S G+G +++ + I + + +E E L+ + Sbjct 530 GHAYTLCFGKGEAKWFKKIISDVGRGDKTIEKVEIELKELIVAEDENVYNECLESLSKQV 589 Score = 56.7 bits (135), Expect = 6e-07, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 11/75 (15%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-----------GGDVLMAAETGSGK 52 FSE + P + + +E ++ +Q + ++L GD+L+ A TGSGK Sbjct 155 FSEFEISPFLLKNLERDNFTTAFSVQIAIMDILLHDIKRNRLEPDVKGDILVNAATGSGK 214 Query 53 TGAFSIPVIQIVYET 67 T A+SIP+I+ ++ Sbjct 215 TLAYSIPIIEALHNR 229 >sp|A5DK47|DBP6_PICGU ATP-dependent RNA helicase DBP6 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP6 PE=3 SV=2 Length=631 Score = 227 bits (579), Expect = 8e-64, Method: Composition-based stats. Identities = 98/491 (20%), Positives = 189/491 (38%), Gaps = 64/491 (13%) Query 200 KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 V FS GL+ + ++++ A ++ + LK + + + Sbjct 188 TETVPFSS----FGLSSSMVKNLQSNGFSSAFSVQVSVLKLLLPDM------ESQAIRPD 237 Query 260 KAPDGYIVKSQHSGNA--------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 D + + SG + + + +P +A+++ P++ L Q K Sbjct 238 IGGDLLVNAATGSGKTLGYAIPIIESLRNRIVPRV-RAIVLVPTKPLISQVKATFAMLSK 296 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 N L + + ++ D+ L+ DI+V TPGRL + ++ G +NL +R+LV+DE Sbjct 297 ---NTNLSVVSLRSDISINDEAQRLQVVPDIIVSTPGRLVEHLTNGHINLKSLRYLVIDE 353 Query 372 ADGLLSQGYSDFINRMHNQIPQVT------SDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 AD LL+Q + ++ + ++I + +Q +V SATL + D +LS + Sbjct 354 ADRLLNQSFQNWCETLMSRIDSNPISELDQTWRPSVQKLVFSATLTT-DAGRLSMLKLQR 412 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P + + + + + VP + +L +S + + Sbjct 413 PRLIIVNDRHELVNEL--FTVPATLQEYKLSLGSARSSAKPLVLAK-------------- 456 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + E K+ ++F ++ + + G + L Sbjct 457 -------------FLMSEQKLVNTLVFAKSN---EASLRLCRLLQLLFRVFGLDVTVSYL 500 Query 546 HG-DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 + + R + L+ F V L+ TD+ ARGIDI + VIN LP+ ++YVHR+G Sbjct 501 NSTNNAASTRAKILKDFANQTVHILVVTDLIARGIDIATITNVINYDLPNSSRDYVHRVG 560 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDG--GCTIWYNEMQLLSEI 662 R RA + G A ++ + E W+ + E G +E + + + Sbjct 561 RTARANQDGEAYTMCFGKGETKWFTQLVREVSRQTEVKDVEKGFRDLVSREDEAKYDTCL 620 Query 663 EEHLNCTISQV 673 EE V Sbjct 621 EELQRQVFEGV 631 Score = 57.1 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (49%), Gaps = 11/76 (14%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-----------GGDVLMAAETGSGK 52 FS G+ + + ++ + +Q + L+L GGD+L+ A TGSGK Sbjct 193 FSSFGLSSSMVKNLQSNGFSSAFSVQVSVLKLLLPDMESQAIRPDIGGDLLVNAATGSGK 252 Query 53 TGAFSIPVIQIVYETL 68 T ++IP+I+ + + Sbjct 253 TLGYAIPIIESLRNRI 268 >sp|Q9C8S9|RH48_ARATH Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 GN=RH48 PE=3 SV=1 Length=798 Score = 230 bits (587), Expect = 9e-64, Method: Composition-based stats. Identities = 91/439 (21%), Positives = 176/439 (40%), Gaps = 63/439 (14%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDG------YIVKSQHSGNAQVTQTKFLPNA--PKA 289 LK ++ DG AL KA G +++ + + + K + A Sbjct 349 LKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIETVLKAMNSGKGVNKVAPIFA 408 Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR-DQLSVLENGVDIVVGTPG 348 LI+ P+RELA Q K K+ D ++ +IGG + DQ + I++ TPG Sbjct 409 LILCPTRELASQIAAEGKALLKFHDGIGVQT--LIGGTRFKLDQQRLESEPCQILIATPG 466 Query 349 RLDDLVSTGKLNLSQ---VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 RL D + S+ ++ ++DEAD LL G+ + ++ + +P ++ Q ++ Sbjct 467 RLLDHIENKSGLTSRLMALKLFIVDEADLLLDLGFRRDVEKIIDCLP------RQRQSLL 520 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ +V+++S+ ++ K + S DT+ + Sbjct 521 FSATIPK-EVRRVSQLVL--------KRDHSYIDTI---------------------GLG 550 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + H K E + L E+ I + I+FC T + + Sbjct 551 CVETHDKVRQSCIVAPHESHFHLVPHLLKEH----INNTPDYKIIVFCSTGMVTSLMYTL 606 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 + + + +H + R + + FK+ + L+ +DV+ARG++ V Sbjct 607 LRE---------MKLNVREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVT 657 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 VI V +P +++ Y+HR+GR GR + G + L+A + + + L Sbjct 658 LVIQVGIPSDREQYIHRLGRTGREGKGGEGLLLIAPWERYFLDELKDLPLEPIPAPDLDS 717 Query 646 DGGCTIWYNEMQLLSEIEE 664 + + ++ + I+E Sbjct 718 IVKHQVDQSMAKIDTSIKE 736 Score = 81.3 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 45/111 (41%), Gaps = 0/111 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E + P +A+ L T +Q ++ L G D L+ A+TG+GK+ AF +P I+ Sbjct 330 FDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 389 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 V + + + K + G A DG+ Q+ Sbjct 390 VLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHDGIGVQTL 440 >sp|A4QX49|DBP7_PYRO7 ATP-dependent RNA helicase DBP7 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP7 PE=3 SV=1 Length=825 Score = 231 bits (588), Expect = 1e-63, Method: Composition-based stats. Identities = 93/458 (20%), Positives = 174/458 (38%), Gaps = 58/458 (13%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 + P + +AL++ DG I K ++ + A+++ P+REL +Q + Sbjct 187 YLLPIVNRILALNQNEDGTISKD-------ASKKIHRNSGLLAIVLAPTRELCKQIATVL 239 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVR 365 ++ + P + +IGG + + + + G++I++ TPGRL D + +T L++S R Sbjct 240 EKLLRC--APWIVSTTVIGGESKHSEKARIRKGINILIATPGRLKDHLDNTKVLDVSLAR 297 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSD-------------GKRLQVIVCSATLHS 412 +L+LDE D ++ G+ D + + +++ + R ++CSATL Sbjct 298 WLILDEGDRMMEMGFMDDLKEIVSKMREAPLKKINPDGIQLEPALPTRRVTVLCSATLDH 357 Query 413 FDVKKLSEKIMH--FPTWVDLKGEDSVPDTVH---------------HVVVPVNPKTDRL 455 V++L E + + + G ++ + ++VVP + L Sbjct 358 AQVRRLGEYSLEADKTELIKVDGTEAAKEGDEASEAVFAAPSQLKQSYLVVPAKLRLVTL 417 Query 456 WERLGKSHIRTDDVHAK--------------DNTRPGANSPEMWSEAIKILKGEYAVRAI 501 L S R V D R P+ + K Sbjct 418 IALLKSSFARRGSVMKAIIFISCADSVDFHFDLLRSPIKEPKEAAAPPTPKKAPKDAGET 477 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + + TK ++ E + + LHG R L+ F Sbjct 478 PDTPPKETK---PTKPVTNHTESTVGKACYITSAANTTITLHKLHGSLAQPVRTATLDSF 534 Query 562 -KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 K D LI TD+++RG+D+ V VI ++VHRIGR RA R G A+ + Sbjct 535 SKSKDPSILITTDISSRGLDVPAVDLVIEYDPAFAVADHVHRIGRTARAGRPGKAVLFLQ 594 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 E+ + + +L + + + + L Sbjct 595 PGSEEGYVGLLQKNASTALTPQLYDSVLQAGFSSNIDL 632 Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 59/169 (35%), Gaps = 26/169 (15%) Query 2 AAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIP 59 A F+ +G+ IAQ + +++ PT IQ ++P L+ D + A+TGSGKT A+ +P Sbjct 131 ATFAALGLSRRIAQHLSAKLELKAPTAIQHRAVPHLVTTDEDAFLQAQTGSGKTLAYLLP 190 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGAS----------VLNKWQMNPYDRGSAF---AIGS 106 ++ + L ++G K K + A Sbjct 191 IVNRIL-ALNQNEDGTISKDASKKIHRNSGLLAIVLAPTRELCKQIATVLEKLLRCAPWI 249 Query 107 DGLCCQSREVKEWHGCR---------ATKGLMKGKHYYEVSCHDQGLCR 146 E K R AT G +K H D L R Sbjct 250 VSTTVIGGESKHSEKARIRKGINILIATPGRLKD-HLDNTKVLDVSLAR 297 >sp|Q2UST1|MS116_ASPOR ATP-dependent RNA helicase mss116, mitochondrial OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=mss116 PE=3 SV=1 Length=633 Score = 226 bits (577), Expect = 2e-63, Method: Composition-based stats. Identities = 87/378 (23%), Positives = 134/378 (35%), Gaps = 51/378 (13%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKA--LIVEPSRELAEQTLNNIKQFKKYI 313 + +K G + + Q P + LI+ P+RELA+Q + Q + Sbjct 134 LVQAKTGTGKTLAFLLPTLHCLLQGHSAPPRGQVAILIITPTRELAQQIAKSCDQLTSQL 193 Query 314 DNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKL--NLSQVRFLVLD 370 P L + +GG A L+ G I+V TPGRL D +S LS ++ L+LD Sbjct 194 ARP-LECHIAVGGTARASALARFMKGAPSILVATPGRLKDYLSEPSTAEKLSNIQTLILD 252 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 EAD +L G+ + R+ IP Q + SAT+ + V Sbjct 253 EADTMLESGFLADVKRILQLIP---PKSTGWQGMCFSATVPPK---------VKDVVSVV 300 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 LK + T+ P + ER+ + H+ V Sbjct 301 LKPGYTSISTIEKNETPTH-------ERVPQYHVLIPSVA-------------------D 334 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 ++ ++ + I+F T F Q +H Sbjct 335 TFTTLASLLNLEIKNSSKIIVFGVTANMVALFAAAFSQ-------GLTPLKVFEIHSRLS 387 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 R + FK+ + +DV RG+D V VI V LP + YVHR+GR RA Sbjct 388 QSARTKTTALFKEAATGIMFASDVIGRGMDFPNVDLVIQVGLPSNGEQYVHRVGRTARAG 447 Query 611 RMGLAISLVATEKEKVWY 628 G AI L+ + Sbjct 448 NDGRAIILLTEAESFFMK 465 Score = 69.8 bits (169), Expect = 5e-11, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 39/88 (44%), Gaps = 5/88 (6%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-DVLMAAETGSGKTGAFSIPVIQIVYET 67 + ++ QA++ M++ T +Q + + D L+ A+TG+GKT AF +P + + + Sbjct 99 LDSKLLQALKVMEFEYMTPVQHRVLTELPSWRSDCLVQAKTGTGKTLAFLLPTLHCLLQG 158 Query 68 LKDQQEGKKGKTTIKTGASVLNKWQMNP 95 +G+ I + + Sbjct 159 HSAP---PRGQVAI-LIITPTRELAQQI 182 >sp|Q61R02|DDX55_CAEBR Probable ATP-dependent RNA helicase DDX55 homolog OS=Caenorhabditis briggsae OX=6238 GN=CBG06798 PE=3 SV=1 Length=577 Score = 225 bits (572), Expect = 3e-63, Method: Composition-based stats. Identities = 86/409 (21%), Positives = 145/409 (35%), Gaps = 64/409 (16%) Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S G + + + PN ALI+ PSREL Q +N IK F + KL Sbjct 53 SPTGSGKTLAFVLPMMRMIQNARLQPNEIGALILSPSRELCSQIVNVIKPFA---EKMKL 109 Query 319 RELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQ----VRFLVLDEAD 373 + GG + + +N ++I+V TPGRL ++ K +++ V+ LV+DEAD Sbjct 110 NVETVTGGQKVDKNIKMFKNKDINILVATPGRLFQIIQHEKTMIARAMKGVQLLVIDEAD 169 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 + D + + + IP K+ + + SAT + L + V + Sbjct 170 RFNEIQFEDHMREILSCIP------KQRRTGLFSAT-QVKEEDDLMVFGLRNAKQVKVSQ 222 Query 434 E--DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E + P T+ + V Sbjct 223 ERNSAAPSTLKNYFVECPADE--------------------------------------- 243 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + I++ + +IF + + F + +HG Sbjct 244 -KTSVCLEFIRQRTDKKVLIFFPSCNSVRYFHKIFERCLTKR-------PLFAVHGKCSN 295 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R ++ F + +I TDV ARGIDI + +VI LP +VHR GR R R Sbjct 296 PHRAAQIKAFSESTNGVMISTDVMARGIDITDIDWVIQYDLPKHSSWFVHRAGRTARCGR 355 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 G A+ L+ATE+ + + ++ +++ Sbjct 356 DGNALILIATEQLAYVSFLDNHEKVKLEEVKVPTSTSRKAEELRQKMIK 404 Score = 54.4 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 20/65 (31%), Positives = 36/65 (55%), Gaps = 1/65 (2%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + PEI + V + + TD+Q + +L DV++ + TGSGKT AF +P+++++ Sbjct 17 LGPEILE-VFDKSYKSFTDVQVLAGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAR 75 Query 69 KDQQE 73 E Sbjct 76 LQPNE 80 >sp|Q8W4E1|RH47_ARATH DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH47 PE=1 SV=2 Length=551 Score = 223 bits (568), Expect = 6e-63, Method: Composition-based stats. Identities = 103/459 (22%), Positives = 170/459 (37%), Gaps = 57/459 (12%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNF----GEEEFKFP---PKDGFVALSKAPDG 264 + + E P LF A + L + E F P A+ K D Sbjct 91 MKVVKEKKPAEIVSPLFSAKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDA 150 Query 265 YIVKSQHSGNAQVTQTKFLP-------------------NAPKALIVEPSRELAEQTLNN 305 I SG L +A+IV PSREL Q + Sbjct 151 VIQSYTGSGKTLAYLLPILSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVRE 210 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQV 364 +++ + +++ ++GG Q L+ N IVVGTPGR+ ++ GKL+ Sbjct 211 VEKLLGPVHRRMVQQ--LVGGANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHGC 268 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR--------LQVIVCSATLHSFDVK 416 RFLVLDE D LLS + + I+R+ + + + G + Q I+ SAT+ F V Sbjct 269 RFLVLDEVDELLSFNFREDIHRILEHVGKRSGAGPKGEVDERANRQTILVSATVP-FSVI 327 Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 + ++ H P V P PV T E G+ + Sbjct 328 RAAKSWSHEPVLVQ--ANKVTPLDTVQPSAPVMSLTPTTSEADGQIQTTIQSL------- 378 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 + + K + R + I F ++ +G Sbjct 379 -PPALKHYYCISKHQHKVDTLRRCVHALDAQSVIAFMNHSRQLKDVVYKLEARG------ 431 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK 596 + +HGD R L++FK G+++ L+ +++ARG+D+ V+N+ LP + Sbjct 432 ---MNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVAECDLVVNLELPTDA 488 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 +Y HR GR GR R G +++ + + + G Sbjct 489 VHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLG 527 Score = 92.9 bits (229), Expect = 2e-18, Method: Composition-based stats. Identities = 24/105 (23%), Positives = 50/105 (48%), Gaps = 4/105 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G+ + ++E + +PTD+Q+ ++P I+ G D ++ + TGSGKT A+ +P++ Sbjct 110 KSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPIL 169 Query 62 QIV---YETLKDQQEGKKGKTTIKT-GASVLNKWQMNPYDRGSAF 102 + E + +T I+ + + M Sbjct 170 SEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKL 214 >sp|Q59MW2|DBP6_CANAL ATP-dependent RNA helicase DBP6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP6 PE=3 SV=2 Length=606 Score = 224 bits (571), Expect = 6e-63, Method: Composition-based stats. Identities = 95/474 (20%), Positives = 185/474 (39%), Gaps = 63/474 (13%) Query 220 PHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ 279 +++ A ++ + L E + + + D + S SG Sbjct 182 KNLEKMGFTEAFSVQISVLNMMLPE------IEAQKLKPDRVGDILVNASTGSGKTLAYS 235 Query 280 TKFLPN-------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 + + + +I+ P++ L Q + + Q L+ + V+ D+ Sbjct 236 IPIIESLYRRVVPRVRVIILVPTKPLINQVKSTLLQLS---SGTNLQIAALKNDVSINDE 292 Query 333 LSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF----INRM 387 L DI+V TPGRL + + +NLS +++L++DEAD LL+Q + ++ ++++ Sbjct 293 KDSLTKSVPDIIVSTPGRLVEHLLNDSINLSSLQYLIIDEADRLLNQSFQNWSNVLLDKI 352 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 +QI +Q +V SATL + D KLS + P + + + + + VP Sbjct 353 DSQINIAEVWKLSVQKLVFSATLTT-DAGKLSSLKFYNPRLIIVNDSKQLVNEI--FTVP 409 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 V ++ + K+ ++ + I +K+ Sbjct 410 VTLSEFKIHLGVAKNSLKPLILTK---------------------------FLISTNKLS 442 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG-DRKPHERKQNLERFKKGDV 566 +IF ++ L + K ++ + + R + L++F +V Sbjct 443 NVLIFTKSNESSIRLTELLTSLF---QKLSINLKIAFINSTNNRTSIRSKILKQFSNQEV 499 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 LI TD+ ARGID+ + VIN LP+ + YVHR+GR RA ++G A S + E Sbjct 500 NILITTDLIARGIDVASITDVINYDLPNSSREYVHRVGRTARANQVGYAYSFCFGKGENS 559 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI-EEHLNCTISQVEPDIKV 679 W+ + + N +L+S+ EE + +++ K Sbjct 560 WFKKLAHEVSRSKEVE-------NVDLNVKELISDRDEEIYQQALHELQQQAKK 606 Score = 55.9 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 11/75 (15%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQ----AESIPLILGGG-------DVLMAAETGS 50 AF++ + + +E+M + +Q +P I D+L+ A TGS Sbjct 169 KAFTDFKSSSFMIKNLEKMGFTEAFSVQISVLNMMLPEIEAQKLKPDRVGDILVNASTGS 228 Query 51 GKTGAFSIPVIQIVY 65 GKT A+SIP+I+ +Y Sbjct 229 GKTLAYSIPIIESLY 243 >sp|P90897|RDE12_CAEEL DEAD-box ATP-dependent RNA helicase rde-12 OS=Caenorhabditis elegans OX=6239 GN=rde-12 PE=1 SV=4 Length=959 Score = 230 bits (587), Expect = 6e-63, Method: Composition-based stats. Identities = 108/433 (25%), Positives = 165/433 (38%), Gaps = 79/433 (18%) Query 221 HMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQT 280 N L P + +K+N + + DG+ V Q +A T Sbjct 381 SWTNSGLHPTILETLKRIKYN-------NVRTIQGAMIPQVLDGHDVLGQAETSAGKTAA 433 Query 281 KFLP-------------------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 LP + P ALI+ P+RELA Q ++ Y N + L Sbjct 434 FGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRT---YCQNTDIIVL 490 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 L G L+ + NG DI++GT GR+ D ++L +RFLV DEAD LL Sbjct 491 LSYGQSDRARSLNEIRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKK 550 Query 382 DFINRMHNQIPQV--TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 D + + I Q I+ SAT + V ++ ++M L G+D + Sbjct 551 DPLGHLGAIIKDAGFMESAATRQTIMTSATFN-ASVMTVANELMK-----RLPGQDEM-- 602 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + + RL +R+ + E ++ +ILK + Sbjct 603 ------IKIVLANGRLSKRVNLEFFECKGL------------AEKNAKLREILKQNVNGK 644 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + + IIF + K CD G LHGDR R++ + Sbjct 645 TL------KTIIFVQKKDQCDACAAKLTSGGML---------AQTLHGDRSQDMREKLIN 689 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD-----EKQNYVHRIGRVGRAERM-- 612 FK V L+ TD+ +RGID+ + VIN LPD ++HR GR GR R Sbjct 690 DFKSNRVNLLVTTDLLSRGIDVSDLDRVINFDLPDGDPDQGADTFIHRAGRTGRTGRKEN 749 Query 613 GLAISLVATEKEK 625 GL +S V + ++ Sbjct 750 GLCVSFVDPQSDR 762 Score = 97.9 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 1/108 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +++ G+ P I + ++ + + IQ IP +L G DVL AET +GKT AF +P+ Sbjct 379 LTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPI 438 Query 61 IQIVYETLKDQQ-EGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 I + ++ + + ++ + + + ++ + +D Sbjct 439 IDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHEALRTYCQNTD 486 >sp|Q10PV9|RH47B_ORYSJ DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0219700 PE=2 SV=1 Length=573 Score = 223 bits (569), Expect = 7e-63, Method: Composition-based stats. Identities = 105/482 (22%), Positives = 184/482 (38%), Gaps = 56/482 (12%) Query 200 KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 + +K+ ++LGL + + + L +++A + K V S Sbjct 124 DESLFSAKSFEELGLPPLLIDRLNKEGLSTPTEVQSAAIP--------IISQKHDAVIQS 175 Query 260 KAPDGYIVKSQHSGNAQVTQTKF--------LPNAPKALIVEPSRELAEQTLNNIKQFKK 311 G + +++ K + +A+IV PSREL Q + +++ Sbjct 176 YTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVREVEKILG 235 Query 312 YIDNPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 D +++ ++GG Q L+ N IVVGTPGR+ ++ + GKL+ RFLVLD Sbjct 236 PNDKRLVQQ--LVGGANRSRQEEALKKNKPLIVVGTPGRISEISAGGKLHTHGCRFLVLD 293 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKR-----------LQVIVCSATLHSFDVKKLS 419 E D LLS Y + ++R+ + + + R Q I+ SAT+ F V + + Sbjct 294 EVDQLLSFNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIP-FSVIRAA 352 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 H P V VVP++ T L ++ + N Sbjct 353 RSWGHDPVLVRAMS-----------VVPLDSITVPRP-VLSQTDANPNSPSNSVNQAAVN 400 Query 480 NSPEMWSEAIKILKGEYAVRAIKE----HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 + P I K ++ V ++ + I F ++ +G Sbjct 401 SLPPSLEHYYCISKAQHKVDTLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARG----- 455 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE 595 LHGD R L++FK G+ R L+ +++ARG+D+ VIN+ LP + Sbjct 456 ----MKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELSARGLDVPECDLVINLDLPTD 511 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE 655 +Y HR GR GR R G +++ + V + E + Sbjct 512 STHYAHRAGRTGRLGRKGTVVTICEETETFVVRKMRKQLAVPIKPCEFTEGKLLVHNEED 571 Query 656 MQ 657 ++ Sbjct 572 VE 573 Score = 89.4 bits (220), Expect = 4e-17, Method: Composition-based stats. Identities = 29/133 (22%), Positives = 55/133 (41%), Gaps = 3/133 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G+ P + + + PT++Q+ +IP+I D ++ + TGSGKT A+ +P++ Sbjct 131 KSFEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPIL 190 Query 62 QIV--YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEW 119 + + +Q K + + M +D Q V Sbjct 191 SEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQL-VGGA 249 Query 120 HGCRATKGLMKGK 132 + R + L K K Sbjct 250 NRSRQEEALKKNK 262 >sp|A2QA23|DBP6_ASPNC ATP-dependent RNA helicase dbp6 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp6 PE=3 SV=1 Length=593 Score = 223 bits (568), Expect = 1e-62, Method: Composition-based stats. Identities = 102/501 (20%), Positives = 194/501 (39%), Gaps = 67/501 (13%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 + DLG+ + +++ A +++ + + P D ++ + Sbjct 121 RKFADLGIDSSLLRVLEDNGYREAFAVQSTVIPLLL--QGPTNHPGDLCISAATG----S 174 Query 267 VKSQHSGNAQVTQTKFLP-NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 K+ VT K LP + LIV P+REL +Q + LR +G Sbjct 175 GKTLSYVLPLVTALKPLPAPRLRGLIVVPTRELVKQAREACELCAA---GSGLRVASAVG 231 Query 326 GVAARDQLS--------VLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLL 376 VA +D+ E VDI++ TPGRL D + T L + +LV+DEAD LL Sbjct 232 NVAIKDEQRESLPGYVHRSEPNVDILICTPGRLVDHLRYTKGFTLKNLEWLVIDEADRLL 291 Query 377 SQGYSDFINRMHNQIPQVTSD------------------GKRLQVIVCSATLHSFDVKKL 418 ++ + ++++ + + + K + +V SAT+ + DV KL Sbjct 292 NESFQEWVDVVMTSLDARKAPDAFGFSGNFLSGLGLPIQSKEPRKVVLSATM-TRDVTKL 350 Query 419 SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPG 478 + + P V + + + + V P + + L L + + D K Sbjct 351 NSLRLANPKLVVIGSDAAATEDESGGVAPSDEQF-TLPPTLEEHTVSVGDGSQKPLYLLR 409 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 + E + ++F ++ L + + Sbjct 410 LLLSHIKLET-------------------KILVFTKSSESASRLARLLALLEPSLSDRIG 450 Query 539 QFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + ++ R + L +++G + +I TD A+RG+D+ + +V+N +P Sbjct 451 TI----IKSNKSSASR-KTLTAYRRGKISVIIATDRASRGLDLRSLTHVVNYDVPASITT 505 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 YVHR+GR RA + G A +LVA +E W+ ++G TR + G + M+ Sbjct 506 YVHRVGRTARAGQKGSAWTLVA-HREGKWFASQIAKGSDGKITRSTKVGKVQFKLDNMK- 563 Query 659 LSEIEEHLNCTISQVEPDIKV 679 E++ + +E ++K Sbjct 564 --EVKARYASALDLLEKEVKT 582 Score = 66.7 bits (161), Expect = 4e-10, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 52/125 (42%), Gaps = 5/125 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-----DVLMAAETGSGKTGAF 56 F+++G+ + + +E+ + +Q+ IPL+L G D+ ++A TGSGKT ++ Sbjct 121 RKFADLGIDSSLLRVLEDNGYREAFAVQSTVIPLLLQGPTNHPGDLCISAATGSGKTLSY 180 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV 116 +P++ + + G T + ++ G A + + + Sbjct 181 VLPLVTALKPLPAPRLRGLIVVPTRELVKQAREACELCAAGSGLRVASAVGNVAIKDEQR 240 Query 117 KEWHG 121 + G Sbjct 241 ESLPG 245 >sp|Q0DVX2|RH50_ORYSJ DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0108600 PE=2 SV=2 Length=641 Score = 224 bits (570), Expect = 2e-62, Method: Composition-based stats. Identities = 98/436 (22%), Positives = 161/436 (37%), Gaps = 63/436 (14%) Query 224 NQALFPACVLKNAELKF--NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTK 281 ++ F + L +FG + + + I SG Sbjct 238 SRRSFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCP 297 Query 282 FL---------------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 + P P+ +++ P+ ELA Q LNN + K R ++ GG Sbjct 298 VVQNLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISK--SGVPFRSMVATGG 355 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFIN 385 + QL L+ +D+++ TPGR L+ G + L+ +R +VLDE D L + + ++ Sbjct 356 FRQKTQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLH 415 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ P T Q + +ATL L + V +T Sbjct 416 QLITVAPLTT------QYLFVTATLP-------------------LDIYNKVVETFPDCE 450 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + + P R RL + + G ++ E E K V+ I+E Sbjct 451 LIMGPGVHRTSSRLEEILVDC----------SGDDNEEKNPETAFSNKKSALVKIIEESP 500 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK-- 563 + + IIFC C +E + D+K Q + H +R N++ F Sbjct 501 VRKTIIFCNKIETCRKVENALRR----VDRKASQIKVLPFHAALDQQQRIANIKEFLNKQ 556 Query 564 -GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR-AERMGLAISLVAT 621 D FL+CTD A+RGID V +V+ P + YV R+GR R A G A Sbjct 557 TADSMFLVCTDRASRGIDFANVNHVVLFDYPRDPSEYVRRVGRTARGASGNGKAFVFAVG 616 Query 622 EKEKVWYHVCSSRGKG 637 ++ + V KG Sbjct 617 KQVSLARRVMERNIKG 632 Score = 77.9 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 32/142 (23%), Positives = 52/142 (37%), Gaps = 4/142 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G EI A+ + P+ IQA + +L G ++ ++GSGKT A+ PV+ Sbjct 240 RSFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVV 299 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 Q + K++ EG + VL + R + G Sbjct 300 QNL---RKEEVEGLHRSSPRNPRVVVLTPTA-ELASQVLNNCRSISKSGVPFRSMVATGG 355 Query 122 CRATKGLMKGKHYYEVSCHDQG 143 R L +V G Sbjct 356 FRQKTQLESLDQELDVLIATPG 377 >sp|Q5APM7|MS116_CANAL ATP-dependent RNA helicase MSS116, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MSS116 PE=3 SV=2 Length=668 Score = 224 bits (571), Expect = 2e-62, Method: Composition-based stats. Identities = 102/439 (23%), Positives = 173/439 (39%), Gaps = 62/439 (14%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 F + G V +K G + + + +++ P+R+LA Q Sbjct 120 PIFNTEKGLVCRAKTGTGKTLAFAVPTLQYAYKNRGK--GVSTVVLVPTRDLAFQIEEEY 177 Query 307 KQF---KKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRL---DDLVSTGKLN 360 ++ KY + P L LIIGG + +IV+ TPGRL Sbjct 178 RKLISHLKYNERPNLE--LIIGG---QRTSFNPRRPAEIVIATPGRLEKELQTDRKLAKC 232 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 S V + + DEAD LL G+ +N + + +V + K ++ ++ SAT+ + + S+ Sbjct 233 FSNVTYRIYDEADRLLDVGFESVLNEIDGLLYKVRTTPKPIKSLLFSATV-DEAISEFSK 291 Query 421 KIMHFPTWVDL----KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 K +H P + L K + +P+ +H ++ D++ L + H Sbjct 292 KHIH-PEYEFLNTVTKDDLEIPENIHQQLIECTDGIDKVNVSLSELHG------------ 338 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ--QGGGPD 534 +K+H + I+F TK D +Y + Sbjct 339 -----------------------IMKQHNDYKVIVFLPTKTAVDWFYEYITNALDDELFE 375 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 LHG R +R L+ FK LI TDVAARGID+ V V+ + Sbjct 376 LFSKPPRVFMLHGGRSVRQRSAALKGFKVAKKGILISTDVAARGIDVKDVTNVMQMFPSV 435 Query 595 EKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 E +Y+H++GR GRA + G A SL AT E + + + K + ++ + N Sbjct 436 EIADYIHKVGRTGRAGKKGKA-SLFATPAELPYVSLLKRKRKVKFQEVIQSEK-----LN 489 Query 655 EMQLLSEIEEHLNCTISQV 673 ++ +IE L+ T + Sbjct 490 SSNIIDQIESPLDSTKEFL 508 Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 13/104 (13%) Query 4 FSEMG----VMPEIAQAVEEMDWLLPTDIQAESI-PLILGGGDVLMAAETGSGKTGAFSI 58 F + + I ++ + D+ T IQ +S+ P+ ++ A+TG+GKT AF++ Sbjct 85 FEDFKGKGYIHDSIINSLHKNDFKELTPIQQKSLVPIFNTEKGLVCRAKTGTGKTLAFAV 144 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 P +Q Y+ +GK + Sbjct 145 PTLQYAYKN--------RGKGVSTVVLVPTRDLAFQIEEEYRKL 180 >sp|O80792|RH33_ARATH Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 GN=RH33 PE=3 SV=1 Length=845 Score = 227 bits (579), Expect = 2e-62, Method: Composition-based stats. Identities = 96/550 (17%), Positives = 197/550 (36%), Gaps = 109/550 (20%) Query 151 TMQASLDLGTDKFGFGFGGTGKKSH---NKQFDNYGEEFTM-HDTIGCYLDIDKGHVKFS 206 T + + ++ ++ + + DN EE HD+I D+ + Sbjct 326 TKRVNRNVTDEELYPPLDINRVREDLSKKQSVDNVMEEKQEPHDSIYSAKRFDESCIS-- 383 Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG-- 264 + + +++A L DG AL KA G Sbjct 384 ---------PLTLKALSASGIVKMTRVQDATLS----------ECLDGKDALVKAKTGTG 424 Query 265 ----YIVKSQHSGNAQVTQTKFLPNA--PKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 +++ + + + K + LI+ P+RELA Q K K ++ + Sbjct 425 KSMAFLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLK--NHDGI 482 Query 319 RELLIIGGVAAR-DQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ---VRFLVLDEADG 374 +IGG R DQ + I++ TPGRL D + S+ ++ ++DEAD Sbjct 483 GVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEADL 542 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM-HFPTWVDLKG 433 LL G+ + ++ + +P ++ Q ++ SAT+ +V+++S+ ++ +++D G Sbjct 543 LLDLGFKRDVEKIIDCLP------RQRQSLLFSATIPK-EVRRVSQLVLKRDHSYIDTIG 595 Query 434 ED--SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 D V + ++ Sbjct 596 LGCVETHDKVKQSCIVAPHESH------------------------------------FH 619 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 L I + I+FC T + + + + + +H + Sbjct 620 LVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLRE---------MKLNVREIHARKPQ 670 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + FK+ + L+ +DV+ARG++ V VI V +P +++ Y+HR+GR GR + Sbjct 671 LHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREGK 730 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 G + L+A + + + L S ++ ++ +++ Sbjct 731 GGKGLLLIAPWERYFLDELKDLPLEPIPAPDLD---------------SRVKHQVDQSMA 775 Query 672 QVEPDIKVPV 681 +++ IK Sbjct 776 KIDTSIKEAA 785 Score = 81.7 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 45/111 (41%), Gaps = 0/111 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F E + P +A+ + T +Q ++ L G D L+ A+TG+GK+ AF +P I+ Sbjct 377 FDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTGTGKSMAFLLPAIET 436 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 V + + + K + G A DG+ Q+ Sbjct 437 VLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHDGIGVQTL 487 >sp|Q6P9R1|DDX51_MOUSE ATP-dependent RNA helicase DDX51 OS=Mus musculus OX=10090 GN=Ddx51 PE=1 SV=1 Length=639 Score = 223 bits (569), Expect = 2e-62, Method: Composition-based stats. Identities = 106/464 (23%), Positives = 174/464 (38%), Gaps = 89/464 (19%) Query 260 KAPDGYIVKSQHSGNAQVTQTKFLPN-------APKALIVEPSRELAEQTLNNIKQFKKY 312 + D + SG + +AL+V P++ELA+Q F Y Sbjct 220 QPSDLCVSAPTGSGKTLAFVIPVVQALLHRVVCHIRALVVLPTKELAQQVSKV---FNIY 276 Query 313 IDNPKLRELLIIGGVAARDQLSVLENG--------VDIVVGTPGRLDDLV-STGKLNLSQ 363 D LR L+ G + + L DIVV TPGRL D + T +L Q Sbjct 277 TDTTPLRVALVTGQKSLAKEQESLVQKTADGFRCLADIVVATPGRLVDHIDQTPGFSLQQ 336 Query 364 VRFLVLDEADGLLSQGYSDFINRMH-----------------NQIPQVTSDGKRL----- 401 +RFL++DEAD ++ + ++ R+ PQ + Sbjct 337 LRFLIIDEADRMIDSMHQSWLPRVVAAAFYSEGPTGSCALLQRTQPQALTAASTCVPQMP 396 Query 402 -QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 Q ++ SATL + D +KL ++ P RL ++ Sbjct 397 LQKLLFSATL-TQDPEKLQRLGLYQPRLFST----------------------RLGQQSP 433 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 K D+ K G + K + + +A+ F ++ + Sbjct 434 KDTAEVDENSGKYTFPVGLTHHYVPCRLSS--KPLIVLHLVLRMSCSRALCFTNSRENSH 491 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L GG S P +RK+ L++F++G ++ LI TD ARGID Sbjct 492 RLYLLAQAFGG--------VSVAEFSSRYGPGQRKKILKQFEQGKIQLLISTDATARGID 543 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 + GV VIN P + YVHR+GR RA + G A +L+ +E+ + + Sbjct 544 VQGVELVINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQM---------- 593 Query 641 TRLKEDGGCTIWYNEM--QLLSEIEEHLNCTISQVEPDIKVPVD 682 + E G + ++E+ +LL + +SQ+E +K Sbjct 594 --VSEAGVPELTHHEIPRKLLQPLVARYETALSQLEKTVKEEQK 635 Score = 57.1 bits (136), Expect = 4e-07, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 14/73 (19%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILG--------GG------DVLMAAETGSGKTG 54 V P++ + + +QA IP +L G D+ ++A TGSGKT Sbjct 177 VHPDLQKQLRANGITSYFPVQAAVIPALLESADHGFLIGRGGYQPSDLCVSAPTGSGKTL 236 Query 55 AFSIPVIQIVYET 67 AF IPV+Q + Sbjct 237 AFVIPVVQALLHR 249 >sp|O76743|GLH4_CAEEL ATP-dependent RNA helicase glh-4 OS=Caenorhabditis elegans OX=6239 GN=glh-4 PE=1 SV=2 Length=1156 Score = 230 bits (585), Expect = 3e-62, Method: Composition-based stats. Identities = 86/429 (20%), Positives = 169/429 (39%), Gaps = 70/429 (16%) Query 221 HMKNQALFPACVLKNAELKFNFGEEEFKFP---PKDGFVALSKAPDGYIVKSQHSGNAQV 277 + + A F + +L N + P + F + D SG Sbjct 730 EIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLA 789 Query 278 TQTKFL----------------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 F+ +P+ LIV P+REL QT +Q L+ Sbjct 790 FLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQL---TYETGLKCG 846 Query 322 LIIGGVAARDQLSVLEN--GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ- 378 L GG + + L + ++I+V T GRL D V+ G+++LS+++++VLDEAD ++ Sbjct 847 LAFGGYSRNANVQHLRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSN 906 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH-SFDVKKLSEKIMHFPTWVDLKGEDSV 437 + + ++++ + + Q ++ SA+ L + + T + + + Sbjct 907 DFGEEVSKIIG-----SPGERTQQTVLFSASFSEDLQSDDLPKFVKEGYTMLQVDKFGTA 961 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + + ++PV R + + + I + Sbjct 962 NEKIDQKILPVPRTEKR----------------------------DAIYKLLGIDENTVT 993 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 + + + +IF + CD L G S + +H + +R + Sbjct 994 LLPDAPIEKQKTLIFVNSVKFCDTLAALISSAG---------VSTISMHSYQNQEQRDRT 1044 Query 558 LERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE--KQNYVHRIGRVGRAERMGLA 615 L+ F++G + ++ ++V ARG++I G+ +V+N +PD+ YV+RIGR GRA G + Sbjct 1045 LDDFRRGKYQCMVASNVCARGLNIAGLDHVVNYDMPDKNGFDEYVNRIGRTGRAGFTGTS 1104 Query 616 ISLVATEKE 624 + V E + Sbjct 1105 TAFVDVEND 1113 Score = 92.1 bits (227), Expect = 8e-18, Method: Composition-based stats. Identities = 33/114 (29%), Positives = 51/114 (45%), Gaps = 3/114 (3%) Query 1 MAAFSEMGVMPE-IAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 MA+F ++P+ + ++ M PT IQ S I+ G DV+ A TGSGKT AF IP Sbjct 734 MASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIP 793 Query 60 -VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 VI+++ E KD+ + + + + + GL C Sbjct 794 FVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQLTY-ETGLKCG 846 >sp|Q4P9E5|SPB4_USTMA ATP-dependent rRNA helicase SPB4 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=SPB4 PE=3 SV=2 Length=767 Score = 226 bits (575), Expect = 3e-62, Method: Composition-based stats. Identities = 95/417 (23%), Positives = 158/417 (38%), Gaps = 92/417 (22%) Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR-------------------- 319 T+ + ALIV P+RELAEQ + F ++ ++ Sbjct 95 TRLKKDEVGALIVSPTRELAEQIYKVLVMFLDAQNHAHVQAQQQQDQDEQDEQDEQEAQS 154 Query 320 -------------------------------ELLIIGG---VAARDQLSVLENGVDIVVG 345 L++GG D + ++G DI+VG Sbjct 155 DSDTDPDASTALNNKRKSSNHLVARKNMISGAQLVVGGSKCTPLDDYRQLRDSGADILVG 214 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 TPGRL++L+S + S + LVLDEAD LL G+++ + R+ + +P K+ + + Sbjct 215 TPGRLEELLSKKGVKKSSLEVLVLDEADRLLDLGFTENLRRILSLLP------KQRRTGL 268 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT+ + +L + P V +K E H + R L + Sbjct 269 FSATMTDA-LSELVRIGLRNPVRVVVKVEA------KHKTSSSIDDSRRTPATLQNLY-- 319 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + ++ +I+ E + AI + I++ T + Sbjct 320 -----------QLCRAQNKLAQLARIVLFESSQNAIS-GGARKLIVYFSTCAQVNYFYSV 367 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF--------KKGDVRFLICTDVAAR 577 F Q + H+ LHG + P +RK + F L CTDVAAR Sbjct 368 FSQ---VSILRQHRVKLYALHGKQTPSKRKSMFDTFVASTALDSGASGASVLFCTDVAAR 424 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 G+D+ V V+ P + + + HR GR RA R G AI ++ T +E+ + + Sbjct 425 GLDLPDVDVVVQYDPPTDPKVFSHRCGRTARAGRNGRAIVMLHTGREQDFVSYMRVK 481 Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 25/102 (25%), Positives = 47/102 (46%), Gaps = 6/102 (6%) Query 3 AFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++++ + P + + ++ + T +QA +IPL + DV++ A TGSGKT AF IPV Sbjct 27 SWTKLTPPLTPWVVSLLSDLGFGQMTPVQASTIPLFVSHKDVVVEAVTGSGKTLAFVIPV 86 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 ++++ + K S + Y F Sbjct 87 LEMLAR----RTTRLKKDEVGALIVSPTRELAEQIYKVLVMF 124 >sp|P34640|DDX55_CAEEL Probable ATP-dependent RNA helicase DDX55 homolog OS=Caenorhabditis elegans OX=6239 GN=ZK512.2 PE=3 SV=2 Length=578 Score = 221 bits (563), Expect = 4e-62, Method: Composition-based stats. Identities = 83/409 (20%), Positives = 144/409 (35%), Gaps = 64/409 (16%) Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 S G + + K P ALI+ PSREL Q ++ I+ F + ++ L Sbjct 53 SPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLN---L 109 Query 319 RELLIIGGVAARDQLSVLEN-GVDIVVGTPGRLDDLVSTGKL----NLSQVRFLVLDEAD 373 + GG + + +N V+I+V TPGRL ++ K + ++ LV+DEAD Sbjct 110 TVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEAD 169 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 + D + + + IP K+ + + SAT + L + V + Sbjct 170 RFNEIQFEDHMREILSCIP------KQRRTGLFSAT-QVKEEDDLMVFGLRNAKQVKVAQ 222 Query 434 E--DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 E + P T+ + V Sbjct 223 ERNSAAPSTLKNYYVECRADE--------------------------------------- 243 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 K + I++ + +IF + + F + G +HG Sbjct 244 -KTSVCLEFIRQRTDKKILIFFPSCNSVRYFYKIFERCLGKR-------PLFAVHGKCSN 295 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R ++ F +I TDV ARGIDI + +VI LP +VHR GR R R Sbjct 296 PHRASQIKAFSDSTNGVMISTDVMARGIDISDIDWVIQFDLPKHSSWFVHRAGRTARCGR 355 Query 612 MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 G A+ L+A+E+ + + ++ + +++ Sbjct 356 EGNALILIASEQLAYVNFLDNHEKVKLDEIKVPTNNSRKSEELRQKMIK 404 Score = 54.8 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 24/123 (20%), Positives = 50/123 (41%), Gaps = 4/123 (3%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + F E + PE+ + V + + TD+Q S +L DV++ + TGSGKT AF +P+ Sbjct 10 LKTFRE-KLGPELLE-VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 ++++ Q G + + ++ + + + + K Sbjct 68 MRMI--QNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIK 125 Query 121 GCR 123 + Sbjct 126 MFK 128 >sp|Q4IBS2|MAK5_GIBZE ATP-dependent RNA helicase MAK5 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=MAK5 PE=3 SV=2 Length=781 Score = 225 bits (574), Expect = 4e-62, Method: Composition-based stats. Identities = 98/486 (20%), Positives = 178/486 (37%), Gaps = 68/486 (14%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP---------- 284 + ++ + +F P K + + G+ V + + T +P Sbjct 223 SPQIISAIAKLKFMKPTKIQKRTIPEIVAGHDVIGKAQTGSGKTLAFGIPMVERWLEMQE 282 Query 285 -----NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG 339 P +L++ P+RELA+Q +++K + + ++ GG++ Q LE Sbjct 283 QGVKRTGPMSLVLSPTRELAKQLGDHLKALCDGLPSAPY-VCVVTGGLSILKQQRQLEK- 340 Query 340 VDIVVGTPGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 DIV+GTPGRL +++S + +++RFLV+DEAD L G + + + Sbjct 341 ADIVIGTPGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFKVGQFKEAEDIIGALDGKSP 400 Query 397 -----------------DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD 439 + Q +V SAT KL+ K G+ S D Sbjct 401 GDDAESEEESDEEDEDDEDAARQTLVFSATFDKDLQTKLAGK-----------GKSSGND 449 Query 440 TVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVR 499 + K L + L K + ++ E E + K Y Sbjct 450 ---------DEKMAYLMKCL-KFRGEPKFIDVNPVSQMAEGLREGLIECGAMEKDLYLYT 499 Query 500 AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + + + ++F + P + + LH R ++LE Sbjct 500 VLILNPGRRTLVFTNSISAVRR---------LTPLLTNLNLTALPLHSQMAQKARHRSLE 550 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 RF LI TDVAARG+DI V V++ +P Y+HR GR R E G+++ L Sbjct 551 RFTASRNSILIATDVAARGLDIKEVDQVLHYHVPRSADTYIHRSGRTARGESSGISVILC 610 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 A E+ + +S+ + +K + + + S ++ ++ + + Sbjct 611 APEEV-LPTRRLASKVHAVRSAGVKREHFIQTLLIDRKAASRLKPRVDLAKKIADTILAK 669 Query 680 PVDEFD 685 D Sbjct 670 EKAHSD 675 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 20/158 (13%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 MAA+ + + P+I A+ ++ ++ PT IQ +IP I+ G DV+ A+TGSGKT AF IP+ Sbjct 214 MAAWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPEIVAGHDVIGKAQTGSGKTLAFGIPM 273 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF------------AIGSDG 108 ++ E Q++G K + S + D A G Sbjct 274 VERWLE---MQEQGVKRTGPMSLVLSPTRELAKQLGDHLKALCDGLPSAPYVCVVTGGLS 330 Query 109 LCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCR 146 + Q R++++ T G +EV D+ L Sbjct 331 ILKQQRQLEKADIVIGTPGR-----LWEVLSGDRALQS 363 >sp|Q8N8A6|DDX51_HUMAN ATP-dependent RNA helicase DDX51 OS=Homo sapiens OX=9606 GN=DDX51 PE=1 SV=3 Length=666 Score = 223 bits (568), Expect = 5e-62, Method: Composition-based stats. Identities = 94/429 (22%), Positives = 158/429 (37%), Gaps = 79/429 (18%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG------- 339 +AL+V P++ELA+Q F Y D LR L+ G + + L Sbjct 282 IRALVVLPTKELAQQVSKV---FNIYTDATPLRVSLVTGQKSLAKEQESLVQKTADGYRC 338 Query 340 -VDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD 397 DIVV TPGRL D + T +L Q+RFL++DEAD ++ + ++ R+ Q Sbjct 339 LADIVVATPGRLVDHIDQTPGFSLQQLRFLIIDEADRMIDSMHQSWLPRVVAAAFQSEDP 398 Query 398 GKRL-----------------------QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 Q ++ SATL + + +KL + +H P L Sbjct 399 ADPCALLQRRQAQAVTAASTCCPQMPLQKLLFSATL-TQNPEKLQQLGLHQP---RLFST 454 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + + L ++ K Sbjct 455 GLAHRGLEDTDGDGDSGKYAFPVGLTHHYVPCSLSS----------------------KP 492 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + + E + + F ++ + L GG P +R Sbjct 493 LVVLHLVLEMGFSRVLCFTNSRENSHRLFLLVQAFGG--------VDVAEFSSRYGPGQR 544 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 + L++F++G ++ LI TD ARGID+ GV V+N P + YVHR+GR RA + G Sbjct 545 RMILKQFEQGKIQLLISTDATARGIDVQGVELVVNYDAPQYLRTYVHRVGRTARAGKTGQ 604 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 A +L+ +E+ + + + G + E +LL + +SQ+E Sbjct 605 AFTLLLKVQERRFLRMLTE--AGAPELQRHELSS--------KLLQPLVPRYEEALSQLE 654 Query 675 PDIKVPVDE 683 +K + Sbjct 655 ESVKEERKQ 663 Score = 56.3 bits (134), Expect = 9e-07, Method: Composition-based stats. Identities = 22/72 (31%), Positives = 33/72 (46%), Gaps = 14/72 (19%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILG--------GG------DVLMAAETGSGKT 53 V P++ + + +QA IP +L G D+ ++A TGSGKT Sbjct 204 DVHPDLQKQLRAHGISSYFPVQAAVIPALLESAACGFLVGRGGYRPSDLCVSAPTGSGKT 263 Query 54 GAFSIPVIQIVY 65 AF IPV+Q + Sbjct 264 LAFVIPVVQALL 275 >sp|Q2UFL0|DBP9_ASPOR ATP-dependent RNA helicase dbp9 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp9 PE=3 SV=1 Length=605 Score = 221 bits (563), Expect = 9e-62, Method: Composition-based stats. Identities = 108/568 (19%), Positives = 177/568 (31%), Gaps = 132/568 (23%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + L L + + + +++ + +A +K G Sbjct 29 FESLNLDPRLRQALIKEKFTKPTLVQAKAIPLAL--------EGKDILARAKTGSGKTAA 80 Query 269 SQHSGNAQVTQTKFLPNAPKA---LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + Q K + KA LI+ P+RELAEQ N + F + +R + + Sbjct 81 YVLPILQTILQKKATDPSFKATTGLILVPTRELAEQVQNVVTTFAAFC-GKDVRSVNLTQ 139 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 V+ Q ++L + D+VV TP R+ + + L+L + LV+DEAD +LS GY + IN Sbjct 140 KVSDAVQRTMLADYPDLVVSTPARVVTNLGSSALSLENLTHLVIDEADLVLSYGYEEDIN 199 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IP + +Q + SATL +V L P + L+ +D V V Sbjct 200 ALAKAIP------RGVQTFLMSATLTD-EVDTLKGLFCRSPVTLKLEDKDDQGAGVSQFV 252 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V L V + Sbjct 253 VRCAEDEKFLLTY---------------------------------------VIFKLQLI 273 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + IIF C ++ + Q G L+ + + R ++ F KG Sbjct 274 KGKVIIFVDDVDRCYRVKLFLEQFG---------IKSCVLNSELPINSRIHVVQEFNKGV 324 Query 566 VRFLICTDV---------------------------------------------AARGID 580 LI D +RGID Sbjct 325 YDILIAADEQEVIGARKSKKSKETEEAGSSDEDEGEPEDKSKRRKVSGKEKDYGISRGID 384 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE----------------KE 624 V V+N LP ++Y HRIGR GRA + G+A+S V + E Sbjct 385 FQNVACVLNFDLPSTSKSYTHRIGRTGRAGKTGMALSFVIPKDQHGKHRPTSTATSKHDE 444 Query 625 KVWYHVCSSRGKGCYNTRLK--EDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 V + +GK + + E + M L ++ + + Sbjct 445 SVLAKIVKRQGKLGHEVKPYHFEMKQVEAFRYRMTDALRAVTRLAVQEARAREIRQELIK 504 Query 683 EFDGKVTYGQKRAAGGGSYKGHVDILAP 710 K + + H D L Sbjct 505 SEKLKRHFEENPEELRQ--LRHDDELRS 530 Score = 102 bits (253), Expect = 3e-21, Method: Composition-based stats. Identities = 29/101 (29%), Positives = 50/101 (50%), Gaps = 3/101 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +QA++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 29 FESLNLDPRLRQALIKEKFTKPTLVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 88 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + + K T + + + FA Sbjct 89 ILQK---KATDPSFKATTGLILVPTRELAEQVQNVVTTFAA 126 >sp|O13622|MS116_SCHPO ATP-dependent RNA helicase mss116, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mss116 PE=3 SV=1 Length=535 Score = 219 bits (558), Expect = 1e-61, Method: Composition-based stats. Identities = 82/413 (20%), Positives = 152/413 (37%), Gaps = 60/413 (15%) Query 249 FPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK--ALIVEPSRELAEQTLNNI 306 FP ++ V +K G + V + K N+ K ++I+ P+RELA Q Sbjct 73 FPNEENAVVQAKTGTGKTLAFLLVAFKDVLKGKPRLNSSKIHSVILSPTRELALQIFEEA 132 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVR 365 ++ +R IGG + + + + G ++++ TPGRL+D + ++ L + Sbjct 133 RKL---TYGTGIRVSYAIGGNSKMREENAIRRGNANLLIATPGRLEDHLQNPRI-LESLS 188 Query 366 F--LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 +LDEAD L+ G+++ I +H + + + + SAT+ + Sbjct 189 TDSFILDEADRLMDMGFAESILNIHEAV-----TTTKTRKLCFSATMPPKVSNVFRGILG 243 Query 424 HFPTWVDLKG--EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 ++ E + V V+ Sbjct 244 TDFKLINCLDPNEPPTHERVPQFVI----------------------------------- 268 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 E + + + + + I+F T D + GG + + Sbjct 269 -ETKLDKVFSSSLSLLQQLTSSNPSSRIIVFLPTISMVDFV--------GGVLENHLKIP 319 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 C LH +R+ E F+K L TDV ARG+D + V+ +T P +Y+H Sbjct 320 CFILHSGLTTAQRRSITESFRKCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDYIH 379 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 RIGR GRA + G A ++ +++ + K L + T+ + Sbjct 380 RIGRTGRAGKTGEAYLILLEQEKPFLNSIKHLPLKRATIEPLSDQALSTLRSD 432 Score = 59.0 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 19/106 (18%), Positives = 42/106 (40%), Gaps = 6/106 (6%) Query 4 FSEM-GVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVI 61 FSE+ + ++ + T +Q + + + ++ A+TG+GKT AF + Sbjct 39 FSEVASLSSTFKNSLSRAGFEKMTPVQQRVLNEVFPNEENAVVQAKTGTGKTLAFLLVAF 98 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 + V + K + K + I S + + ++ G+ Sbjct 99 KDVLK-GKPRLNSSKIHSVI---LSPTRELALQIFEEARKLTYGTG 140 >sp|A5E1N2|ROK1_LODEL ATP-dependent RNA helicase ROK1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=ROK1 PE=3 SV=1 Length=553 Score = 220 bits (559), Expect = 1e-61, Method: Composition-based stats. Identities = 107/501 (21%), Positives = 194/501 (39%), Gaps = 81/501 (16%) Query 204 KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPD 263 F + + ++ + ++ + + +A + Sbjct 117 SFQDMIGRFKIDKRVLSNLLDAEFVEPTPIQCEAIPITLANRD--------LIACAPTGS 168 Query 264 GYIVKSQHSGNAQV-TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 G + Q+ +Q + + LI+ P+ ELA Q ++ K L + Sbjct 169 GKTLAFLIPLLQQLVSQNVLKNHGIRGLIISPTNELAVQIFQQLEIISK---GKGLNIAI 225 Query 323 IIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 + +A + V++ + DI+V TP RL D+V GK++LS+V LV+DEAD L G++ Sbjct 226 LSKQLAGKISNDVVKASKYDILVSTPLRLIDVVKLGKVDLSKVTQLVIDEADKLFDHGFA 285 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + + + + +++ + SAT+ S V++++ IM P V + +++ +T+ Sbjct 286 EQTDELLSHC-----TNVKIRKSMFSATIPSG-VEEMAHSIMKDPIRVIIGHKEAASNTI 339 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 +V + +L Sbjct 340 EQKLVFTGNEEGKLLAIRQMIQ-------------------------------------- 361 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 IIF ++ L + + + +H +R P +R + ++RF Sbjct 362 NGEFKPPIIIFLQSITRAKALFHELVYD---------KLNVDVIHAERTPKQRDEVIKRF 412 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 K GD+ LI TDV ARG+D GV VIN +P Q YVHRIGR GR R G A++ Sbjct 413 KNGDIWVLITTDVLARGVDFKGVNMVINYDVPQSAQAYVHRIGRTGRGGRSGKAVTFFTK 472 Query 622 EKEKVWYHVCS-SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT-------ISQV 673 E +K + + + GC + G + W ++ LS+ E+ T IS V Sbjct 473 EDDKAVKPIINVMKQSGCTD-------GLSDWMEDLGKLSKREKRAVKTHEIERKKISTV 525 Query 674 EPDIKVPVDEFDGKVTYGQKR 694 IK + + ++R Sbjct 526 PSVIKQKRKQRQNMIEASKRR 546 Score = 96.0 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 52/111 (47%), Gaps = 5/111 (5%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F +M + + + + +++ PT IQ E+IP+ L D++ A TGSGKT AF Sbjct 115 IGSFQDMIGRFKIDKRVLSNLLDAEFVEPTPIQCEAIPITLANRDLIACAPTGSGKTLAF 174 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKW-QMNPYDRGSAFAIGS 106 IP++Q + + G +G T + + Q+ +G I Sbjct 175 LIPLLQQLVSQNVLKNHGIRGLIISPTNELAVQIFQQLEIISKGKGLNIAI 225 >sp|Q7S6F3|DBP9_NEUCR ATP-dependent RNA helicase dbp-9 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dbp-9 PE=3 SV=1 Length=676 Score = 222 bits (565), Expect = 1e-61, Method: Composition-based stats. Identities = 110/578 (19%), Positives = 190/578 (33%), Gaps = 130/578 (22%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 DLGL + + Q+ +++ + ++ + +K G Sbjct 94 DLTFSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAGQD--------VLCKAKTGSGK 145 Query 266 IVKSQHSGNAQVTQTKFLPNAP--KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 + + + K P ALI+ P+RELA+Q I F + ++ + Sbjct 146 TAAYVLPVLSGILKRKATDPTPFTSALILVPTRELADQVHKAIDAFSAFC-TKDIQSAKL 204 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 V+ S+L N D++V TP R + +G L+++++++LVLDEAD +LS GY + Sbjct 205 TDNVSDAVLRSLLANAPDVIVSTPARAWHNIESGALSVAKLQYLVLDEADLVLSYGYDED 264 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD-TVH 442 + + +P+ +Q + SATL S ++ L PT +DLK E S D + Sbjct 265 MENIARSLPKG-----GVQTTMMSATLVSDELDTLKGFFCRNPTMLDLKEEFSNEDEKLT 319 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 V L L Sbjct 320 QFYVKCGEDDKWLISYLI---------------------------------------FKL 340 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + ++F L+ +F Q L+ + + R + +E F Sbjct 341 QLIKGPCLVFVADIDRAYRLKLFFEQF---------SIRSCVLNSELPINTRIKIIEEFN 391 Query 563 KGDVRFLICTDV--------------------------------------------AARG 578 +G +I +D +RG Sbjct 392 RGIYDIIIASDERSEVFLEDEKTEEKKEEQGEKKEGDEKKNGKGKKKKGRRDQEYGVSRG 451 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 ID V VIN +P +Y+HRIGR RA R G+A+S+V ++ + K C Sbjct 452 IDFKNVAAVINFDMPTSSSSYIHRIGRTARAGRAGIALSMVVPHD--LFGKHKPTSIKQC 509 Query 639 YNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGG 698 K++ + L+ E N Q+E D Sbjct 510 E----KDEKVLAKVMRQQAKLNRKLEPYNFNKDQMEAFRYRMNDALRAVTK--------- 556 Query 699 GSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQL 736 V I +EL ++T + P++L Sbjct 557 ------VAIREARTRELRQELLRSETLKRYFEENPHEL 588 Score = 101 bits (252), Expect = 6e-21, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 4/102 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 FS++G+ P + QAV + + PT +Q ++IPL L G DVL A+TGSGKT A+ +PV+ Sbjct 96 TFSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAGQDVLCKAKTGSGKTAAYVLPVLS 155 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + T + + AF+ Sbjct 156 GILKRKATDPT----PFTSALILVPTRELADQVHKAIDAFSA 193 >sp|Q9D0R4|DDX56_MOUSE Probable ATP-dependent RNA helicase DDX56 OS=Mus musculus OX=10090 GN=Ddx56 PE=1 SV=1 Length=546 Score = 219 bits (557), Expect = 2e-61, Method: Composition-based stats. Identities = 101/559 (18%), Positives = 185/559 (33%), Gaps = 102/559 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + +GL + + + +++ + ++ + G S Y + Sbjct 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTG----SGKTAAYAIP 64 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 S + + A + L++ P++ELA Q I+Q Y +R + Sbjct 65 MLQSLLHKKATGPVMEQAVRGLVLVPTKELARQAQAMIQQLAAYCAR-DVRVANVSAAED 123 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS-QVRFLVLDEADGLLSQGYSDFINRM 387 + Q +VL D+VVGTP R+ + L L + LV+DEAD L S G+ D + + Sbjct 124 SASQRAVLMEKPDVVVGTPSRVLSHLQQNTLKLRDSLELLVVDEADLLFSFGFEDELKSL 183 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHHVVV 446 +P++ Q + SAT + DV+ L E ++H P + L+ PD + V Sbjct 184 LCHLPRI------YQAFLMSATFN-EDVQTLKELVLHNPVTLKLQESQLPGPDQLQQFQV 236 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + D+ + Sbjct 237 VCETEEDKFLLLYALLKLSLI--------------------------------------R 258 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 +A++F T L + Q L+G+ R + +F +G Sbjct 259 GKALLFVNTLERGYRLRLFLEQF---------SIPSCVLNGELPLRSRCHIISQFNQGLY 309 Query 567 RFLICTDV---------------------------AARGIDIHGVPYVINVTLPDEKQNY 599 +I TD ARGID H V V+N LP + Y Sbjct 310 DCVIATDAEILGPQVKGKRRGRGSKGNKASDPESGVARGIDFHHVSAVLNFDLPPTAEAY 369 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 VHR GR RA G+ ++ V ++ + E + +M+ + Sbjct 370 VHRAGRTARANNPGIVLTFVLPAEQPFLGKIEDLLSGEG------EAPILLPYQFQMEEI 423 Query 660 SEIEEHLNCTISQVEPDI--KVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAA 717 + V + + E ++ + +K ++ + L +L Sbjct 424 ESFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEK---LKTYFEDNPRDLQLLRHDLPL 480 Query 718 LEKEAQTSFLHLGYLPNQL 736 + HLG++P+ L Sbjct 481 HPAVVKP---HLGHVPDYL 496 Score = 100 bits (250), Expect = 6e-21, Method: Composition-based stats. Identities = 32/101 (32%), Positives = 46/101 (46%), Gaps = 2/101 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ P + QAV ++ W PT IQ ++IPL L G D+L A TGSGKT A++IP++Q Sbjct 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQS 68 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + K + + A Sbjct 69 LLH--KKATGPVMEQAVRGLVLVPTKELARQAQAMIQQLAA 107 >sp|Q9NY93|DDX56_HUMAN Probable ATP-dependent RNA helicase DDX56 OS=Homo sapiens OX=9606 GN=DDX56 PE=1 SV=1 Length=547 Score = 218 bits (555), Expect = 4e-61, Method: Composition-based stats. Identities = 98/539 (18%), Positives = 179/539 (33%), Gaps = 98/539 (18%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + +GL + + + +++ + ++ + G S Y + Sbjct 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTG----SGKTAAYAIP 64 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 + + A + L++ P++ELA Q + I+Q Y +R + Sbjct 65 MLQLLLHRKATGPVVEQAVRGLVLVPTKELARQAQSMIQQLATYCAR-DVRVANVSAAED 123 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS-QVRFLVLDEADGLLSQGYSDFINRM 387 + Q +VL D+VVGTP R+ + L L + LV+DEAD L S G+ + + + Sbjct 124 SVSQRAVLMEKPDVVVGTPSRILSHLQQDSLKLRDSLELLVVDEADLLFSFGFEEELKSL 183 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHHVVV 446 +P++ Q + SAT + DV+ L E I+H P + L+ PD + V Sbjct 184 LCHLPRI------YQAFLMSATFN-EDVQALKELILHNPVTLKLQESQLPGPDQLQQFQV 236 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 + D+ + Sbjct 237 VCETEEDKFLLLYALLKLSLI--------------------------------------R 258 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 ++++F T L + Q L+G+ R + +F +G Sbjct 259 GKSLLFVNTLERSYRLRLFLEQF---------SIPTCVLNGELPLRSRCHIISQFNQGFY 309 Query 567 RFLICTDV---------------------------AARGIDIHGVPYVINVTLPDEKQNY 599 +I TD ARGID H V V+N LP + Y Sbjct 310 DCVIATDAEVLGAPVKGKRRGRGPKGDKASDPEAGVARGIDFHHVSAVLNFDLPPTPEAY 369 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVC-----SSRGKGCYNTRLKEDGGCTIWYN 654 +HR GR RA G+ ++ V ++ + +RG + + + Y Sbjct 370 IHRAGRTARANNPGIVLTFVLPTEQFHLGKIEELLSGENRGPILLPYQFRMEEIEGFRYR 429 Query 655 EMQLLSEIEEHLNCTISQVE-PDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTV 712 + + + I + +IK + + TY + + H L P V Sbjct 430 CRDAMRSVTKQ---AIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLR-HDLPLHPAV 484 Score = 100 bits (248), Expect = 1e-20, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 50/103 (49%), Gaps = 10/103 (10%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ P + QAV ++ W PT IQ ++IPL L G D+L A TGSGKT A++IP++Q+ Sbjct 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQL 68 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 + K T + + P + A Sbjct 69 LLHR----------KATGPVVEQAVRGLVLVPTKELARQAQSM 101 >sp|Q3SZ40|DDX56_BOVIN Probable ATP-dependent RNA helicase DDX56 OS=Bos taurus OX=9913 GN=DDX56 PE=2 SV=1 Length=546 Score = 218 bits (554), Expect = 5e-61, Method: Composition-based stats. Identities = 98/542 (18%), Positives = 179/542 (33%), Gaps = 98/542 (18%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 S + +GL + + + +++ + ++ + G S Y Sbjct 6 SLGFEHMGLDHRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTG----SGKTAAY 61 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + + + A +AL++ P++ELA Q + I+Q Y +R + Sbjct 62 AIPMLQLLLHRKATGPVVEQAVRALVLVPTKELARQAQSMIQQLAAYCAR-DIRVANVSA 120 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS-QVRFLVLDEADGLLSQGYSDFI 384 + Q +VL D+VVGTP R+ + + L L + LV+DEAD L S G+ + + Sbjct 121 AEDSASQRAVLMEKPDVVVGTPSRILNHLQQDNLKLRDSMELLVVDEADLLFSFGFEEEL 180 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHH 443 + +P++ Q + SAT + DV+ L E ++H P + L+ PD + Sbjct 181 KSLLCHLPRI------YQAFLMSATFN-EDVQALKELVLHNPVTLKLQESQLPGPDQLQQ 233 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V + D+ + Sbjct 234 FQVVCETEEDKFLLLYALLKLSLI------------------------------------ 257 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 ++++F T L + Q L+G+ R + +F + Sbjct 258 --RGKSLLFVNTLERSYRLRLFLEQF---------SIPACVLNGELPLRSRCHIISQFNQ 306 Query 564 GDVRFLICTDV---------------------------AARGIDIHGVPYVINVTLPDEK 596 G +I TD ARGID H V V+N LP Sbjct 307 GFYDCVIATDAEVLGPPVKGKHRGKGPKRDKASDPEAGVARGIDFHHVCAVLNFDLPPTP 366 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS-----SRGKGCYNTRLKEDGGCTI 651 + Y+HR GR RA G+ ++ V ++ + S + + Sbjct 367 EAYIHRAGRTARANNPGIVLTFVLPTEQSQLGKIEELLSGDSGAPVLLPYQFHMEEIEGF 426 Query 652 WYNEMQLLSEIEEHLNCTISQVE-PDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAP 710 Y + + + I + +IK + + TY + + H L P Sbjct 427 RYRCRDAMRSVTKQ---AIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLR-HDLPLHP 482 Query 711 TV 712 V Sbjct 483 AV 484 Score = 97.5 bits (241), Expect = 8e-20, Method: Composition-based stats. Identities = 29/64 (45%), Positives = 42/64 (66%), Gaps = 0/64 (0%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F MG+ + QAV ++ W PT IQ ++IPL L G D+L A TGSGKT A++IP++Q+ Sbjct 9 FEHMGLDHRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQL 68 Query 64 VYET 67 + Sbjct 69 LLHR 72 >sp|Q6ATJ8|RH16_ORYSJ DEAD-box ATP-dependent RNA helicase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0728800 PE=2 SV=1 Length=670 Score = 219 bits (557), Expect = 2e-60, Method: Composition-based stats. Identities = 95/465 (20%), Positives = 168/465 (36%), Gaps = 102/465 (22%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 LGL ++ ++ + L A ++ + ++ K G S Y++ H Sbjct 97 LGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTG----SGKTFAYLLPMLH 152 Query 272 SGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD 331 + + +AP I+ P+REL +Q N ++ KL+ + + ++ +D Sbjct 153 ELLKLSAEGRIRKSAPNVFILVPTRELCQQVHNEASSLLEFC-TSKLKVVQVNASMSDKD 211 Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR----FLVLDEADGLLSQGYSDFINRM 387 L +I+V TP + +S G + S ++ ++LDEAD LLS D I + Sbjct 212 IKVALSGPPNILVTTPACVASCISKGIIRGSSIKESLSMMILDEADLLLSYRCEDDIKAL 271 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP-----TWVDLKGEDSVPDTVH 442 IP + Q I+ SAT S D++KL++ ++H P T V +D +P V Sbjct 272 VPHIP------RSCQSILMSAT-SSADIEKLTKLLLHNPFILTLTEVGHAKDDLIPKNVQ 324 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + + K L+ V Sbjct 325 QFWISCDAKDKMLY---------------------------------------ILVLLKL 345 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 E + +IF + L + + G L+ + + R ++ F Sbjct 346 ELIQKKVLIFVNSIDSAFKLRLFLEKFG---------IRSSVLNAELPQNSRLHIIQAFN 396 Query 563 KGDVRFLICTDV---------------------------------AARGIDIHGVPYVIN 589 +LI TD RGID V V+N Sbjct 397 ARLFDYLIATDDNKSKEERQANKGNKKDSRVSRKQLQQTLDAEFGVVRGIDFKNVFTVVN 456 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 +P + YVHR+GR GRA + G +ISLV+ ++ ++ + + Sbjct 457 YDMPPDPAGYVHRVGRTGRANKTGASISLVSPKENGIFEDIENML 501 Score = 101 bits (252), Expect = 5e-21, Method: Composition-based stats. Identities = 32/101 (32%), Positives = 53/101 (52%), Gaps = 4/101 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F E+G+ ++ +A+ + T IQ E+IPLIL G DV+ A+TGSGKT A+ +P++ Sbjct 93 SFDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLH 152 Query 63 IVYETLKDQQEGKKGKTTIKTGAS-VLNKWQMNPYDRGSAF 102 E LK EG+ K+ + ++ S+ Sbjct 153 ---ELLKLSAEGRIRKSAPNVFILVPTRELCQQVHNEASSL 190 >sp|Q6CKZ4|DBP6_KLULA ATP-dependent RNA helicase DBP6 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP6 PE=3 SV=1 Length=630 Score = 217 bits (553), Expect = 3e-60, Method: Composition-based stats. Identities = 90/431 (21%), Positives = 169/431 (39%), Gaps = 47/431 (11%) Query 260 KAPDGYIVKSQHSGNAQVTQTKFLP-------NAPKALIVEPSRELAEQTLNNIKQFKKY 312 + D + S SG + N +A+I+ P++ L Q + + + + Sbjct 227 RVGDILVNASTGSGKTLAYSVPLVQILRSRTVNKVRAIILVPTKILIHQVYDCLSKLSQG 286 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 + + + L N DI++ TPGRL D + +L ++FLVLDEA Sbjct 287 TSLN--VSMSKLENSLKEEHNKFLYNSPDILIITPGRLVDHLQMESFDLKTLKFLVLDEA 344 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQV--IVCSATLHSFDVKKLSEKIMHFPTWVD 430 D LL+Q + ++ + + + D + V +V SATL + + +KL +H P Sbjct 345 DRLLNQSFQNWNQVLFHHLTNDKQDKRPGNVIKMVFSATLTT-NAEKLYNLYLHNPKI-- 401 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 + D+V +P + +++ T P + I Sbjct 402 -----FLTDSVKLYSIPK----------------KLQELNVNIPTAKSLFKPLLLLRIIH 440 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF-IQQGGGPDKKGHQFSCVCLHGDR 549 +K + A + ++F ++ LE G G + + +H + Sbjct 441 DIKSSASRNA-------KILVFVKSNEASIRLESLLHAMLGSGIIEDEYNMFLSSIHSNI 493 Query 550 KPHERKQNLERF--KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 ++ ++ F + LI TD+ ARGIDI+ + +VIN LP Q YVHR GR Sbjct 494 SKGSSRKLIQEFASSEQKKSVLISTDIMARGIDINEITHVINYDLPISSQQYVHRCGRTA 553 Query 608 RAERMGLAISLVATEKEKVWY--HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 RA G+AI+L+ + E+ ++ H+ + + + + +++ Sbjct 554 RANTEGIAINLLVGKGEQKFWSQHIDTDLSRDIDGYQPSAYLDEEKLSELFSIEDTLKDT 613 Query 666 LNCTISQVEPD 676 I Q++ Sbjct 614 YKGCIKQLQTS 624 Score = 42.4 bits (98), Expect = 0.017, Method: Composition-based stats. Identities = 27/129 (21%), Positives = 51/129 (40%), Gaps = 23/129 (18%) Query 9 VMPEIAQAVEEMDWLLPT-DIQA----ESIPLILGG------------GDVLMAAETGSG 51 + + + + ++ T IQ + +PL+ GD+L+ A TGSG Sbjct 182 LDARLLKNITS-NFSSETFPIQTILFDKVLPLLNSSFKANRKLFTRRVGDILVNASTGSG 240 Query 52 KTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 KT A+S+P++QI+ + K + I +L + + S + + Sbjct 241 KTLAYSVPLVQILR-----SRTVNKVRAIILVPTKILIHQVYDCLSKLSQGTSLNVSMSK 295 Query 112 QSREVKEWH 120 +KE H Sbjct 296 LENSLKEEH 304 >sp|Q0UZ59|DBP9_PHANO ATP-dependent RNA helicase DBP9 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DBP9 PE=3 SV=1 Length=597 Score = 215 bits (547), Expect = 1e-59, Method: Composition-based stats. Identities = 91/465 (20%), Positives = 159/465 (34%), Gaps = 98/465 (21%) Query 246 EFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-----APKALIVEPSRELAE 300 + D +G L N +LI+ P++ELA Sbjct 69 SPTAVQSKAIPLALQGRDILARSGTGTGKTGAYLLPILHNTLLRKGKTSLILVPTKELAL 128 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q K + +R I G + + L + DIV+ TP R ++TG L Sbjct 129 QITKVAKALSAHCGQA-VRIQNIAGKESEVVTKAKLADNPDIVIATPARASANINTGALA 187 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 ++++ LV+DE D ++ G+ + ++++ IP K +Q+ + SATL++ +V+ L Sbjct 188 VTELAHLVVDEGDLVMGYGFKEDLDQIAQNIP------KGVQMFLMSATLNT-EVESLGS 240 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 + + P + L D V V+ + Sbjct 241 LLCNDPVVLKLDDLDKDSKRVKQYVIKCAEE----------------------------- 271 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 E ++ + + IK + I+F ++ + Q G Sbjct 272 ------EKFLLIYAMFKLGLIK----GKTIVFVGDTDRSYRVKLFLEQFG---------I 312 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA------------------------- 575 L+ + R +E F K LI +D Sbjct 313 KSCVLNSELPLASRLHIVEEFNKNIYNILIASDETEILGSQKKADESRPKKKPKTDKEAK 372 Query 576 -----ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 +RGID V V+N P ++Y HRIGR RA + G AIS + + + + Sbjct 373 NDSGVSRGIDFLNVSCVLNFDFPATYKSYFHRIGRTARAGKSGTAISFIIPKDK--YRKH 430 Query 631 CSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 S+ GC N D + Q + E+ N + ++EP Sbjct 431 KSTTFAGCEN-----DEEVLKKVEKHQEAGQKLENYNFDMKRLEP 470 Score = 99.0 bits (245), Expect = 3e-20, Method: Composition-based stats. Identities = 31/125 (25%), Positives = 62/125 (50%), Gaps = 14/125 (11%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +A+F+E+ + P + + + + W PT +Q+++IPL L G D+L + TG+GKTGA+ +P+ Sbjct 46 VASFAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARSGTGTGKTGAYLLPI 105 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 + +KGKT++ + + + + A C Q+ ++ Sbjct 106 LHNTL--------LRKGKTSL--ILVPTKELAL----QITKVAKALSAHCGQAVRIQNIA 151 Query 121 GCRAT 125 G + Sbjct 152 GKESE 156 >sp|Q4P0Y5|DBP7_USTMA ATP-dependent RNA helicase DBP7 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP7 PE=3 SV=1 Length=974 Score = 220 bits (561), Expect = 2e-59, Method: Composition-based stats. Identities = 95/515 (18%), Positives = 157/515 (30%), Gaps = 112/515 (22%) Query 228 FPACVLKNAEL-----KFNFGEEEFKFPPKDGFVALSKAPDGYIV--KSQHSGNAQVTQT 280 F +C L + K N G L D I+ SG Sbjct 202 FASCGLDPLLVYHLASKMNIGSNPTAIQKAALPHLLHPGLDRDILIQAQTGSGKTLTYLL 261 Query 281 KFLPN--------------APKALIVEPSRELAEQTLNNIKQFKKYI------------- 313 + + A+++ P+RELA Q +++ Sbjct 262 PIVQSLLPLCEESFIDRSVGTLAIVLAPTRELARQIYEVLEKLVSLALSLKEQNQEVEGT 321 Query 314 --DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLD 370 L L+ GG + L G I+V TPGRL D + +T ++ + R+LVLD Sbjct 322 VRRTRWLVPGLLSGGSTKNHEKQRLRKGCPILVSTPGRLLDHLQNTSSFDVGKCRWLVLD 381 Query 371 EADGLLSQGYSDFINRMHNQIPQVTS---------------------------------- 396 EAD LL G+ + + + + + Sbjct 382 EADRLLEMGFEEQLTGIVRALDGRRNLACTAARQAMPAYQEGTAPGDADWIPDADVMDTL 441 Query 397 ----DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 +V++CSATL V+ L+ K + P + + +T V + Sbjct 442 GMAWWAHARRVVLCSATLDEH-VQVLAGKTLVNPKIIR-GVKSDAAETSTQVTTDADSTL 499 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 + + + I + ++ + + I+F Sbjct 500 QKRAVKFAAPAQLAQSFVTTPPKLRLVTLLSLLRSYISRARRQWQ-HVDHQAGAGRVIVF 558 Query 513 CRTKIDCDNLEQYF---------------------IQQGGGPDKKGHQFSCVCLHGDRKP 551 D F + LHG Sbjct 559 MSCTDSVDFHYAAFGGARMNASENDASADVQVQDAQLATHVTSELIPDVPIYRLHGSMTQ 618 Query 552 HERKQNLERF----------KKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDE--KQN 598 ER +L+ F ++G L+CT VA+RG+D+ V VI + P E + Sbjct 619 QERISSLKGFSGIRTKHSAERQGFQGSILLCTSVASRGLDLPEVGCVIQLDPPTEGGIEE 678 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 Y+HR+GR R R G + LV ++ HV S Sbjct 679 YLHRVGRTARVGRAGESWLLVLPQELGWVEHVLES 713 Score = 77.1 bits (188), Expect = 4e-13, Method: Composition-based stats. Identities = 31/135 (23%), Positives = 62/135 (46%), Gaps = 8/135 (6%) Query 2 AAFSEMGVMPEIAQAV-EEMDW-LLPTDIQAESIPLILG---GGDVLMAAETGSGKTGAF 56 + F+ G+ P + + +M+ PT IQ ++P +L D+L+ A+TGSGKT + Sbjct 200 SDFASCGLDPLLVYHLASKMNIGSNPTAIQKAALPHLLHPGLDRDILIQAQTGSGKTLTY 259 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV 116 +P++Q + ++ + T+ + + Y+ + L Q++EV Sbjct 260 LLPIVQSLLPLCEESFID-RSVGTLAIVLAPTRELARQIYEVLEKLVSLALSLKEQNQEV 318 Query 117 KEWHGCRATKGLMKG 131 + R T+ L+ G Sbjct 319 EG--TVRRTRWLVPG 331 >sp|A7TT88|ROK1_VANPO ATP-dependent RNA helicase ROK1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=ROK1 PE=3 SV=1 Length=570 Score = 213 bits (542), Expect = 4e-59, Method: Composition-based stats. Identities = 114/501 (23%), Positives = 189/501 (38%), Gaps = 69/501 (14%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 G+D+ L + + F +L N L N E + +AL+ D Sbjct 119 GEDIPLPIGSFEDLITRFSFDKRLLNN--LILNHFTEPTPIQCEAIPLALNN-RDMLACA 175 Query 269 SQHSGNAQVTQTKFLPN--------APKALIVEPSRELAEQTLNNIKQFKKYIDNPK--- 317 SG + K LI+ P++ELA Q + I K Sbjct 176 PTGSGKTLAFLIPLIQQVINDKDTQGLKGLIISPTKELANQIFLECIKLSNRIFLDKKRP 235 Query 318 LRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL 376 L+ L+ ++A+ + V+ DI+V TP RL D+V L+LSQV+ L+ DEAD L Sbjct 236 LQVALLSKSLSAKLRNKVISDKKYDIIVSTPLRLIDVVKNEALDLSQVKHLIFDEADKLF 295 Query 377 SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDS 436 + + + + + + + + SAT+ S +V+++++ IM P V + +++ Sbjct 296 DKTFVEQSDDILSSCSHSSLRKS-----MFSATIPS-NVEEIAKSIMMDPVRVIIGHKEA 349 Query 437 VPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 ++ +V + +L + K + G P Sbjct 350 ANTSIEQKLVFCGNEEGKL-------------IAIKQLVQEGEFKP-------------- 382 Query 497 AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 IIF + L + + +H +R +R + Sbjct 383 -----------PVIIFLESITRAKALYHEMMYD---------SLNVDVIHAERTQVQRNK 422 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 +ERFK GD+ LI TDV ARG+D GV VIN +P Q YVHRIGR GR R G A+ Sbjct 423 IIERFKSGDLWCLITTDVLARGVDFKGVNLVINYDVPRTAQAYVHRIGRTGRGGRSGKAV 482 Query 617 SLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN-CTISQVEP 675 + E + + + + + E +L+ + H IS V Sbjct 483 TFYTKEDSIAIKPIINVMKQSGSEISEWMEKVSKMTKKEKELVKKGRAHSERKQISTVPK 542 Query 676 DIKVPVDEFDGKVTYGQKRAA 696 K+ + +KR A Sbjct 543 IDKIKRKRKLEMIQASKKRKA 563 Score = 88.6 bits (218), Expect = 6e-17, Method: Composition-based stats. Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 6/91 (7%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F ++ + + + PT IQ E+IPL L D+L A TGSGKT AF Sbjct 126 IGSFEDLITRFSFDKRLLNNLILNHFTEPTPIQCEAIPLALNNRDMLACAPTGSGKTLAF 185 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASV 87 IP+IQ V KD Q G KG T Sbjct 186 LIPLIQQVI-NDKDTQ-GLKGLIISPTKELA 214 >sp|A6SNX1|DBP9_BOTFB ATP-dependent RNA helicase dbp9 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=dbp9 PE=3 SV=2 Length=607 Score = 214 bits (544), Expect = 4e-59, Method: Composition-based stats. Identities = 99/490 (20%), Positives = 177/490 (36%), Gaps = 49/490 (10%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 D K +V F+ LGL + + Q ++++ + + Sbjct 18 DAIKENVTFAS----LGLDARLLQGIAKQNFQSPTLVQSKAIPLTL--------EGRDIL 65 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYID 314 A +K G + + K L ALI+ P+RELA+Q ++ F + Sbjct 66 ARAKTGSGKTAAYLLPILHSILKRKELSSTQCTTALILVPTRELADQVYKTVESFTAFCA 125 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 +R + + V+ Q S+L + DIV+ TP R +T L+L+ + +V+DEAD Sbjct 126 -KDVRAVNLTQRVSDAVQRSLLADSPDIVIATPARASLNANTSALSLANLTHMVIDEADL 184 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 +LS GY + + + +P K +Q ++ SATL S +V+ L P + L+ Sbjct 185 VLSYGYDEDLQNVAKIMP------KGVQTVLMSATLTS-EVETLKGLFCRNPEVLKLEEA 237 Query 435 DSVPDTVHHVVVPVNPKTD-RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 + + V VV L + K + +++ E Sbjct 238 EDEGEGVSQFVVKCAEDEKFLLTYVIFKLKLIKGKCIIFVGDIDRCYRLKLFLEQFGTRS 297 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + ++ F + D G + K + D E Sbjct 298 CILNSQLPVNSRIHVVEEFNKNVYDIIIASDEHEVLGDEDEPKSGD--AEEVEADDADEE 355 Query 554 RKQNLERFKKGDVRFLICTDV--------AARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 ++ + K+ +RGID V V+N LP ++Y HRIGR Sbjct 356 KEDAKDAKKETKQPSKKKQKTGKKDKEYGVSRGIDFKNVACVLNFDLPTSSKSYTHRIGR 415 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 RA + G+A+S V + R + N+ ++L++I +H Sbjct 416 TARAGQTGMALSFVIPSE----------------QYRKHKPTSIESAKNDEKVLAKIVKH 459 Query 666 LNCTISQVEP 675 +V+P Sbjct 460 QAKKGKEVKP 469 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 4/102 (4%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F+ +G+ + Q + + ++ PT +Q+++IPL L G D+L A+TGSGKT A+ +P++ Sbjct 25 TFASLGLDARLLQGIAKQNFQSPTLVQSKAIPLTLEGRDILARAKTGSGKTAAYLLPILH 84 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + ++E + T + Y +F Sbjct 85 SILK----RKELSSTQCTTALILVPTRELADQVYKTVESFTA 122 >sp|Q54EC2|DDX55_DICDI Probable ATP-dependent RNA helicase ddx55 OS=Dictyostelium discoideum OX=44689 GN=ddx55 PE=3 SV=1 Length=663 Score = 215 bits (547), Expect = 4e-59, Method: Composition-based stats. Identities = 91/448 (20%), Positives = 163/448 (36%), Gaps = 96/448 (21%) Query 262 PDGYIVKSQHSGNAQV--TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPK-- 317 G + ++ +T ++I+ P+RELA Q + +F ++ Sbjct 57 GSGKTLAFVIPIIEKILKRETNLKKTDIASIIISPTRELAIQIQQVLLEFLNDLNRIDDQ 116 Query 318 ---------------------------------------LRELLIIGGVAARDQLSVLEN 338 + LL+IGG L +N Sbjct 117 NDLENIKTLEDELLEEQEEEENEKEEEEIEKKKKKKKIEISSLLLIGGTDIYQDLVNYKN 176 Query 339 -GVDIVVGTPGRLDDLV-----STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 G +I++GTPGR D+ + + + + L+LDEAD LL G+ IN + ++P Sbjct 177 YGGNILIGTPGRTDEFLTRVVRNDQQFKFKEFEMLILDEADRLLDMGFHLPINSILLKLP 236 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 K+ + + SAT + +VK+L+ M P V + +V H+ Sbjct 237 ------KQRRTGLFSAT-QTSEVKELARTGMRNPFKVSV--------SVKHI-------- 273 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 ++H DN E ++ + L + ++ II+ Sbjct 274 --------ETHEDQSIPTTLDNRYMIVPVEERLNQLVHFL--------LNHIDKNKIIIY 317 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 T D + K LHG +R + + F + L+ T Sbjct 318 FLTCSTVDYFFKILQSVKVLSGK-----PFFSLHGKAPHSQRIKVFDSFSQATNGCLLST 372 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+AARG+DI V +V+ P + + +VHRIGR R R G A+ ++ E++ + Sbjct 373 DLAARGLDIPNVDWVLQYDSPQDPKAFVHRIGRTARMGRDGNALIFLSPEEDSY---IEF 429 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 + K + + T E++ +S Sbjct 430 LKIKKVPLVEMVKAENVTNVLPEIKKIS 457 Score = 87.5 bits (215), Expect = 2e-16, Method: Composition-based stats. Identities = 22/101 (22%), Positives = 41/101 (41%), Gaps = 4/101 (4%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + + + + + +Q+ IPL + DVL+ A TGSGKT AF IP+I+ + + Sbjct 17 LSDSTLNTINRLGFKSMSPVQSAVIPLFMSNKDVLVEACTGSGKTLAFVIPIIEKILK-- 74 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 ++ K S + + F + + Sbjct 75 --RETNLKKTDIASIIISPTRELAIQIQQVLLEFLNDLNRI 113 >sp|P26802|DDX51_DROME Probable ATP-dependent RNA helicase Dbp73D OS=Drosophila melanogaster OX=7227 GN=Dbp73D PE=2 SV=3 Length=687 Score = 215 bits (547), Expect = 5e-59, Method: Composition-based stats. Identities = 111/533 (21%), Positives = 186/533 (35%), Gaps = 73/533 (14%) Query 217 EIPPHMKNQALFPACVLKNAELKFNFGE--EEFKFPPKDGFVALSKAPDGYIVKSQHSGN 274 + MK + LFP ++ + + + F P+D V+ G + Sbjct 150 QALKQMKIKRLFP---VQKQVIPWILEAHAKPPPFRPRDICVSAP-TGSGKTLAFAIPIV 205 Query 275 AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 ++Q + +AL+V P ELA Q I + +L L+ D+ Sbjct 206 QLLSQR--VDCKVRALVVLPVAELALQVYRVISEL---CSKTELEVCLLSKQHKLEDEQE 260 Query 335 VL--------ENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 L + DIVV TPGRL D + T L ++FLV+DEAD ++ + +++ Sbjct 261 KLVEQYKGKYYSKADIVVTTPGRLVDHLHATKGFCLKSLKFLVIDEADRIMDAVFQNWLY 320 Query 386 RMHNQIPQVT------------------SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 + + + + T S GK+ ++ SATL S D +KL + + P Sbjct 321 HLDSHVKETTDQLLAGTQAPLCYAELQASFGKQPHKLLFSATL-SQDPEKLQDLRLFQPR 379 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 V P E + TD A E + Sbjct 380 LFAT--------------VLTMPVLKDATEEGADTEALTDPGQFVGRYTTPAELTEQYCV 425 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 LK ++++K + + F + L K L G Sbjct 426 TELRLKPLTVFALVEKYKWKRFLCFTNSSDQATRLTFVLKVLFQKYSTK-----VSELSG 480 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 + R + L F G + LIC+D ARGID+ V V++ P Y+HR+GR Sbjct 481 NLSAKVRNERLRDFAAGKINGLICSDALARGIDVADVDVVLSYETPRHITTYIHRVGRTA 540 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 RA R G A++++ + ++ + S KG + I + E+ Sbjct 541 RAGRKGTAVTVLTEQDMTLFKKILSDANKGLGE-EIHVSPDIEIQHA--------VEYKE 591 Query 668 CTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEK 720 +K + K K +K + TV+ L +EK Sbjct 592 ALAGLRSEKVKNKNQKMAEKNRVATKALI----HKKQEE--TATVRPLTLMEK 638 Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats. Identities = 31/149 (21%), Positives = 58/149 (39%), Gaps = 18/149 (12%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGG---------GDVLMAAETGSGKTGAFSIP 59 + QA+++M +Q + IP IL D+ ++A TGSGKT AF+IP Sbjct 144 LEKYTCQALKQMKIKRLFPVQKQVIPWILEAHAKPPPFRPRDICVSAPTGSGKTLAFAIP 203 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD-GLCCQSREVKE 118 ++Q++ + + + + + Y S ++ +C S++ K Sbjct 204 IVQLLSQ--------RVDCKVRALVVLPVAELALQVYRVISELCSKTELEVCLLSKQHKL 255 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRV 147 KGK+Y + R+ Sbjct 256 EDEQEKLVEQYKGKYYSKADIVVTTPGRL 284 >sp|Q66HG7|DDX59_RAT Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus OX=10116 GN=Ddx59 PE=2 SV=1 Length=589 Score = 213 bits (541), Expect = 6e-59, Method: Composition-based stats. Identities = 77/414 (19%), Positives = 155/414 (37%), Gaps = 95/414 (23%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG-YIVKSQHSGNAQ--------VT 278 F C L N + ++ P + G I+ S +G+ + + Sbjct 205 FEHCGFPE-TLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVII 263 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 + P ALI+ P+RELA Q K+ + + P+++ +L++GG+ QL L+ Sbjct 264 RALPEDKTPSALILTPTRELAIQIERQAKELMRGL--PRMKTVLLVGGLPLPPQLYRLQQ 321 Query 339 GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 V +AD +L G+ + + P Sbjct 322 HV------------------------------KADTMLKMGFQQQVLDVLEHTP------ 345 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 Q ++ SAT+ + +L+++++H P + ++ +V +++ V Sbjct 346 SDCQTVLVSATIPD-SIDQLADQLLHNPVRIVTGDKNLPCSSVRQIILWVE--------- 395 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 P + +IL + + ++F K+ Sbjct 396 ----------------------DPAKKKKLFEILNDQKLFK-------PPVLVFVDCKLG 426 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D L + +K S +H ++ ER++ L+ +GD ++ T + RG Sbjct 427 ADLLSE--------AVQKITGLSSTSIHSEKSQVERREILKGLLEGDYEVVVSTGILGRG 478 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 +D+ V V+N +P YVH++GRVGR + G AI+ + +++++ V Sbjct 479 LDLVNVKLVVNFDMPSSLDEYVHQVGRVGRLGQNGTAITFINNNSKRLFWDVAK 532 Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 9/99 (9%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F G + Q +++ + +PT IQ + IP+ L G D+L +A+TGSGKT AF +PVI Sbjct 205 FEHCGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIR 264 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + KT + + + + Sbjct 265 AL---------PEDKTPSALILTPTRELAIQIERQAKEL 294 >sp|Q7FGZ2|RH1_ARATH DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana OX=3702 GN=RH1 PE=2 SV=3 Length=522 Score = 211 bits (536), Expect = 8e-59, Method: Composition-based stats. Identities = 88/419 (21%), Positives = 156/419 (37%), Gaps = 45/419 (11%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIK---------------------QFKKYID 314 Q+ ++ + +AL+V P+R+LA Q + + + I Sbjct 95 QLLASRPV-RCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIK 153 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEAD 373 PKL + D LE+ VDI+V TPGRL D ++ T L +R+LV+DE D Sbjct 154 TPKLDAGICY---DPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETD 210 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC--SATLHSFDVKKLSEKIMHFPTWVDL 431 LL + Y ++ + + Q + D SA V++ S V+ Sbjct 211 RLLREAYQSWLPTVLQ-LTQTSDDSLFPSFTPFVPSAFGSLQTVRRQS---------VER 260 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + +V+ D H R + Sbjct 261 GFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETG 320 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 +K Y V +K + ++ IIF + L + G + G Sbjct 321 MKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDP------KIKAKEYSGGLNQ 374 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + L+ F+KGD++ L+ +D RG+D+ GV VIN +P + ++HR GR RA + Sbjct 375 SLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQ 434 Query 612 MGLAISLVATEKEKVWYHVCSSRGK-GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT 669 G +L++ + + + + G C + +I L +++E + Sbjct 435 AGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPALEKLKELVESE 493 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 13/110 (12%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILG----GGDVLMAAETGSGKTGAFSIPVIQIV 64 + P++ +A+E M +Q +G D+ + + TGSGKT ++++P++Q++ Sbjct 38 LNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLL 97 Query 65 YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 + + + D A A GL S Sbjct 98 A--------SRPVRCLRALVVLPTRDLALQVKDVFDAIAPAV-GLSVGSA 138 >sp|Q06218|DBP9_YEAST ATP-dependent RNA helicase DBP9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP9 PE=1 SV=1 Length=594 Score = 212 bits (540), Expect = 1e-58, Method: Composition-based stats. Identities = 113/609 (19%), Positives = 203/609 (33%), Gaps = 144/609 (24%) Query 185 EFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGE 244 + G Y+D + L + +KN ++++ + Sbjct 2 SYEKKSVEGAYID--DSTTF-----EAFHLDSRLLQAIKNIGFQYPTLIQSHAIPLAL-- 52 Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF-----LPNAPKALIVEPSRELA 299 K +A + G + + + K N +I+ P+RELA Sbjct 53 -----QQKRDIIAKAATGSGKTLAYLIPVIETILEYKKTIDNGEENGTLGIILVPTRELA 107 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-- 357 +Q N +++ Y +R L I ++ ++L + +I+VGTPG+L DL+ T Sbjct 108 QQVYNVLEKLVLYCS-KDIRTLNISSDMSDSVLSTLLMDQPEIIVGTPGKLLDLLQTKIN 166 Query 358 KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKK 417 ++L++++FLV+DE D +L+ GY D +N++ +P K LQ + SATL+ D++ Sbjct 167 SISLNELKFLVVDEVDLVLTFGYQDDLNKIGEYLP----LKKNLQTFLMSATLND-DIQA 221 Query 418 LSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 L +K P + E+ ++ +L + +++ Sbjct 222 LKQKFCRSPAILKFNDEE----------------INKNQNKLLQYYVKV----------- 254 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 SE K L V + +IF L+ Q G Sbjct 255 --------SEFDKFL--LCYVIFKLNLIKGKTLIFVNNIDRGYRLKLVMEQFG------- 297 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA---------------------- 575 L+ + + R+ +++F K + LI TD Sbjct 298 --IKSCILNSELPVNSRQHIVDQFNKNVYQLLIATDDTEYIKEEDDEIEEGHNTENQEEK 355 Query 576 ----------------------------ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 +RG+D V V+N LP ++YVHR+GR Sbjct 356 SLEGEPENDKKPSKKKKVQVKKDKEYGVSRGVDFKNVACVLNFDLPTTAKSYVHRVGRTA 415 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 R + G AIS V + + E I + +L E++ + Sbjct 416 RGGKTGTAISFVVP-----LKEFGKHKPSMLQTAKKDERILSRIIKQQSKLGLELQPY-- 468 Query 668 CTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFL 727 +V + R G V I V+EL ++ Sbjct 469 --------------KFDQKQVEAFRYRMEDGFRAVTQVAIREARVKELKQELLASEKLKR 514 Query 728 HLGYLPNQL 736 H P +L Sbjct 515 HFEENPKEL 523 Score = 104 bits (258), Expect = 7e-22, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 2/102 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPV 60 F + + QA++ + + PT IQ+ +IPL L D++ A TGSGKT A+ IPV Sbjct 17 TTFEAFHLDSRLLQAIKNIGFQYPTLIQSHAIPLALQQKRDIIAKAATGSGKTLAYLIPV 76 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 I+ + E K G++ T+ + Y+ Sbjct 77 IETILEYKKTIDNGEEN-GTLGIILVPTRELAQQVYNVLEKL 117 >sp|A7A1G0|DBP9_YEAS7 ATP-dependent RNA helicase DBP9 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP9 PE=3 SV=1 Length=594 Score = 212 bits (540), Expect = 1e-58, Method: Composition-based stats. Identities = 113/609 (19%), Positives = 203/609 (33%), Gaps = 144/609 (24%) Query 185 EFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGE 244 + G Y+D + L + +KN ++++ + Sbjct 2 SYEKKSVEGAYID--DSTTF-----EAFHLDSRLLQAIKNIGFQYPTLIQSHAIPLAL-- 52 Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKF-----LPNAPKALIVEPSRELA 299 K +A + G + + + K N +I+ P+RELA Sbjct 53 -----QQKRDIIAKAATGSGKTLAYLIPVIETILEYKKTIDNGEENGTLGIILVPTRELA 107 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG-- 357 +Q N +++ Y +R L I ++ ++L + +I+VGTPG+L DL+ T Sbjct 108 QQVYNVLEKLVLYCS-KDIRTLNISSDMSDSVLSTLLMDQPEIIVGTPGKLLDLLQTKIN 166 Query 358 KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKK 417 ++L++++FLV+DE D +L+ GY D +N++ +P K LQ + SATL+ D++ Sbjct 167 SISLNELKFLVVDEVDLVLTFGYQDDLNKIGEYLP----LKKNLQTFLMSATLND-DIQA 221 Query 418 LSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 L +K P + E+ ++ +L + +++ Sbjct 222 LKQKFCRSPAILKFNDEE----------------INKNQNKLLQYYVKV----------- 254 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 SE K L V + +IF L+ Q G Sbjct 255 --------SEFDKFL--LCYVIFKLNLIKGKTLIFVNNIDRGYRLKLVMEQFG------- 297 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA---------------------- 575 L+ + + R+ +++F K + LI TD Sbjct 298 --IKSCILNSELPVNSRQHIVDQFNKNVYQLLIATDDTEYIKEEDDEIEEGHNTENQEEK 355 Query 576 ----------------------------ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 +RG+D V V+N LP ++YVHR+GR Sbjct 356 SLEGEPENDKKPSKKKKVQVKKDKEYGVSRGVDFKNVACVLNFDLPTTAKSYVHRVGRTA 415 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 R + G AIS V + + E I + +L E++ + Sbjct 416 RGGKTGTAISFVVP-----LKEFGKHKPSMLQTAKKDERILSRIIKQQSKLGLELQPY-- 468 Query 668 CTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFL 727 +V + R G V I V+EL ++ Sbjct 469 --------------KFDQKQVEAFRYRMEDGFRAVTQVAIREARVKELKQELLASEKLKR 514 Query 728 HLGYLPNQL 736 H P +L Sbjct 515 HFEENPKEL 523 Score = 104 bits (258), Expect = 7e-22, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 2/102 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPV 60 F + + QA++ + + PT IQ+ +IPL L D++ A TGSGKT A+ IPV Sbjct 17 TTFEAFHLDSRLLQAIKNIGFQYPTLIQSHAIPLALQQKRDIIAKAATGSGKTLAYLIPV 76 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 I+ + E K G++ T+ + Y+ Sbjct 77 IETILEYKKTIDNGEEN-GTLGIILVPTRELAQQVYNVLEKL 117 >sp|P34668|YO12_CAEEL Putative ATP-dependent RNA helicase ZK686.2 OS=Caenorhabditis elegans OX=6239 GN=ZK686.2 PE=3 SV=2 Length=593 Score = 211 bits (538), Expect = 2e-58, Method: Composition-based stats. Identities = 98/454 (22%), Positives = 182/454 (40%), Gaps = 56/454 (12%) Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ------VTQTKFLPNAP-KALI 291 + F L + D I SG + P+ +A+I Sbjct 135 PVQYAVLPSLFFEIRSPPPL-RPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVI 193 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKL-RELLIIGGVAARDQLSVL-ENGVDIVVGTPGR 349 + P + L Q ++ +FK++ D + + + + G + L + +++V TP R Sbjct 194 LVPVQTLVAQIVD---EFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPAR 250 Query 350 LDDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRM---------HNQIPQVTSD 397 L +++ ++LS++RFL++DEAD + ++++ + + + Sbjct 251 LVQHLTSKIPPPIDLSKLRFLIVDEADRMGKLMREEWLDLVEFLCGGMERVACLKDIIRQ 310 Query 398 GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWE 457 + Q IV SATL S DV++L + P V + ++ Sbjct 311 RRAPQKIVLSATL-SKDVEELHLWNLFKPRLFSATAVS---------VKDITSGIPQVDH 360 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 G+ + + H T P + ++ + I +K ++ +IF Sbjct 361 VSGRLALPSSISHRLVVTDPKFHPLAVYQQ-------------ITRNKFNRTLIFVNEVS 407 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAAR 577 + L + D+ + L G R R + LE+F K + R LIC+DV AR Sbjct 408 SSNRLAHVLKEL--CKDQFEVDYFTAQLFGKR----RYKMLEKFNKNENRVLICSDVLAR 461 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 G D++ V VIN LP + + +VHR GR GRA + G IS+ E ++++ + Sbjct 462 GTDLNKVDCVINYNLPADDKLFVHRAGRTGRAGQDGYVISVGDKESKRLFVKMLKV--TN 519 Query 638 CYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTIS 671 + ++E I+ +M S+ E L T+S Sbjct 520 LWGDTVEEQMEEYIFEKDMDRYSKALESLKATVS 553 Score = 43.2 bits (100), Expect = 0.010, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (49%), Gaps = 9/47 (19%) Query 27 DIQAESIPLI---------LGGGDVLMAAETGSGKTGAFSIPVIQIV 64 +Q +P + L DV +AA TGSGKT + +PV+ V Sbjct 135 PVQYAVLPSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAV 181 >sp|Q6CDN5|DBP6_YARLI ATP-dependent RNA helicase DBP6 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP6 PE=3 SV=1 Length=607 Score = 211 bits (538), Expect = 2e-58, Method: Composition-based stats. Identities = 100/504 (20%), Positives = 199/504 (39%), Gaps = 94/504 (19%) Query 183 GEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNF 242 + D +G + + D SKN + ++ A ++ A + + Sbjct 178 NATYVEIDDVGSFDEFD-----LSKN---------MMKNLDTLGYTKAFSVQKAVIPWLL 223 Query 243 GEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNA--------QVTQTKFLPNAPKALIVEP 294 +++ P + PD + S SG + + + +P +A++V P Sbjct 224 AQQKLLAP--------DRKPDLLVSASTGSGKTATYGIPIIEKLRDRIVPR-IRAVVVLP 274 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV 354 ++ L Q + ++ K L + + + + + +VLE DIVV PGRL + V Sbjct 275 TKPLVMQVRDVLENLSK---GSSLSVVALRNDRSTKRERAVLET-ADIVVAAPGRLVEQV 330 Query 355 STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG--------KRLQVIVC 406 S + FLV+DEAD LL Q Y D+ + + N + + + +Q ++ Sbjct 331 KENPELFSYIEFLVVDEADRLLGQDYYDWASVLQNNQQRAQAGKTNLTEHYVRNMQTLIF 390 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDS--VPDTVHHVVVPVNPKTDRLWERLGKSHI 464 SATL + + + ++ +H P + DS +P ++ +V V+ L Sbjct 391 SATL-TANPEHIASMDIHNPGVFVIGSSDSYSIPKSLTEIVTHVSAAEKPLM-------- 441 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + + +++ ++F ++ + + Sbjct 442 --------------------------------LCELLVQRDINRGVVFTKSSETAARVAR 469 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + D + + + R++++++F G + FL+CTD+ +RGID V Sbjct 470 MM--EIMDADIFHKDWKIAAVSAETSSVHRRRSMKQFIDGKIDFLVCTDLVSRGIDFV-V 526 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 VIN +P K+ YVHR+GR RA R G A + + E W+ G+ T+ Sbjct 527 DNVINYDIPSGKREYVHRVGRTARAGREGNAYTFLTGSGEAKWFR---EIGEFVGRTQEV 583 Query 645 EDGGCTIWYNE--MQLLSEIEEHL 666 + +N+ + L+++EE + Sbjct 584 DATHINSSHNDGYQEALAKLEEEV 607 Score = 72.5 bits (176), Expect = 7e-12, Method: Composition-based stats. Identities = 51/377 (14%), Positives = 118/377 (31%), Gaps = 62/377 (16%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG---------DVLMAAETGSG 51 + +F E + + + ++ + + +Q IP +L D+L++A TGSG Sbjct 187 VGSFDEFDLSKNMMKNLDTLGYTKAFSVQKAVIPWLLAQQKLLAPDRKPDLLVSASTGSG 246 Query 52 KTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS----D 107 KT + IP+I+ + + + M D + GS Sbjct 247 KTATYGIPIIEKLRD--------RIVPRIRAVVVLPTKPLVMQVRDVLENLSKGSSLSVV 298 Query 108 GLCCQSREVKEWHGCRATKGLMK--GKHYYEVSCHDQGLCRVGW-STMQASLDLGTDKFG 164 L +E ++ G+ +V + + + + +A LG D + Sbjct 299 ALRNDRSTKRERAVLETADIVVAAPGRLVEQVKENPELFSYIEFLVVDEADRLLGQDYYD 358 Query 165 FGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKN 224 + +N+Q G+ + + + FS N Sbjct 359 WA----SVLQNNQQRAQAGKTNLTEHYV-----RNMQTLIFS------------ATLTAN 397 Query 225 QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP 284 + + N + + + P +L++ + + + Sbjct 398 PEHIASMDIHNPGVFVIGSSDSYSIP-----KSLTEIVTHVSAAEKPL---MLCELLVQR 449 Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GV 340 + + ++ S E A + ++ I + + + ++ + ++ + Sbjct 450 DINRGVVFTKSSETAARVARMMEIMDADIFHKDWKIAAVSAETSSVHRRRSMKQFIDGKI 509 Query 341 DIVVGTPGRLDDLVSTG 357 D +V T DLVS G Sbjct 510 DFLVCT-----DLVSRG 521 >sp|Q0CY48|DBP9_ASPTN ATP-dependent RNA helicase dbp9 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp9 PE=3 SV=2 Length=619 Score = 212 bits (539), Expect = 3e-58, Method: Composition-based stats. Identities = 110/564 (20%), Positives = 194/564 (34%), Gaps = 65/564 (12%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 + + L L + + + +++ + +A +K G Sbjct 27 LDFESLNLDPRLRQALVKEKFTKPTLVQAKAIPLAL--------EGKDILARAKTGSGKT 78 Query 267 VKSQHSGNAQVTQTKFLPN---APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 + Q K A LI+ P+RELAEQ N I F + +R + + Sbjct 79 AAYVLPILQTILQKKANDPSLKATTGLILVPTRELAEQVQNVITTFAAFC-GKDVRSVNL 137 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 V+ Q ++L + D++V TP R+ + + L+L + LV+DEAD +LS GY + Sbjct 138 TQKVSDAVQRTMLADYPDLIVSTPSRVIANLGSSALSLENLTHLVIDEADLVLSYGYDED 197 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 IN + IP + +Q + SATL + +V L P + L+ +D V Sbjct 198 INALAKAIP------RGVQTFLMSATL-TAEVDTLKGLFCRSPVILKLEDKDDQGSGVSQ 250 Query 444 VVVPVNPKTDRLWERLGKSHIRTD-----DVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 VV L + V D E + +L E V Sbjct 251 FVVKCAEDEKFLLTYVIFKLQLIKGKVIIFVGDVDRCYRVKLFLEQFGIKSCVLNSELPV 310 Query 499 RAIKE--HKMDQAIIFCRTKIDCDNLEQYFIQQ--------------GGGPDKKGHQFSC 542 + + ++ + D + + G + +G Sbjct 311 NSRLHVVQEFNKGVYDIIIAADEQEVMGARKSKKSKEAEENDAGEAAGSSDEDEGEAQKP 370 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 D+ +R++ + K + +RGID V V+N LP ++Y HR Sbjct 371 STTRSDKPSEKRRKTAGKDKDYGI---------SRGIDFQNVACVLNFDLPTTSKSYTHR 421 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 IGR GRA + G+A+S V + + E I + +L E+ Sbjct 422 IGRTGRAGKTGMALSFVVPAD-----QFGKHKPTSFPTAKHDETVLAKITKRQAKLGHEV 476 Query 663 EEHLNCTISQVEPDIKVPVDEFDG----KVTYGQKR-----AAGGGSYKGHVDILAPTVQ 713 + + + QV+ D V + R K H + ++ Sbjct 477 KP-YHFEMKQVDAFRYRMTDALRSITRLAVQEARAREIRQELIKSEKLKRHFEENPEELR 535 Query 714 ELA-ALEKEAQTSFLHLGYLPNQL 736 +L E + HL ++P+ L Sbjct 536 QLRHDDELRSARIQPHLKHIPDYL 559 Score = 102 bits (255), Expect = 2e-21, Method: Composition-based stats. Identities = 29/101 (29%), Positives = 50/101 (50%), Gaps = 3/101 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +QA++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 29 FESLNLDPRLRQALVKEKFTKPTLVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 88 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + + K T + + + FA Sbjct 89 ILQKKANDPSLK---ATTGLILVPTRELAEQVQNVITTFAA 126 >sp|A7EM78|DBP9_SCLS1 ATP-dependent RNA helicase dbp9 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=dbp9 PE=3 SV=1 Length=607 Score = 211 bits (538), Expect = 3e-58, Method: Composition-based stats. Identities = 98/537 (18%), Positives = 184/537 (34%), Gaps = 46/537 (9%) Query 208 NGK----DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPD 263 NGK LGL + + Q ++++ + +A +K Sbjct 21 NGKATFASLGLDARLLQGIAKQNFQSPTLVQSKAIPLTL--------EGRDILARAKTGS 72 Query 264 GYIVKSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 G + + K L ALI+ P+RELA+Q ++ F + +R + Sbjct 73 GKTAAYLLPILHSILKRKELSPTQCTSALILVPTRELADQVYKTVESFTAFCA-KDVRAV 131 Query 322 LIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 + V+ Q S+L + DIV+ TP R +T L L+ + +V+DEAD +LS GY Sbjct 132 NLTQRVSDAVQRSLLADSPDIVIATPARASLNANTSALLLTNLTHMVIDEADLVLSYGYD 191 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + + + +P K +Q ++ SATL S +V+ L P + L+ + V Sbjct 192 EDLQNVAKIMP------KGVQTVLMSATLTS-EVETLKGLFCRNPEVLKLEEAEDEGKGV 244 Query 442 HHVVVPVNPKTD-RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 VV L + K + +++ E + Sbjct 245 SQFVVKCAEDEKFLLVYVIFKLKLIKGKCIIFVGDIDRCYRLKLFLEQFGTRSCILNSQL 304 Query 501 IKEHKMDQAIIFCRTKID---CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQN 557 ++ F + D + + + ++ + G+++ + + Sbjct 305 PVNSRIHVVEEFNKNVYDIIIASDEHEVLGDEDEPKPEETEEVEADDASGEKEDAKDAKK 364 Query 558 LERFKKGDVRFLICTDV---AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 + + D +RGID V V+N LP ++Y HRIGR RA + G+ Sbjct 365 ETKQPSKKKQKTGKKDKEYGVSRGIDFKNVACVLNFDLPTSSKSYTHRIGRTARAGQTGM 424 Query 615 AISLVAT----------------EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 A+S V + EKV + + K + + ++ Sbjct 425 ALSFVIPSALYRKHKPTSIESAKDDEKVLAKIIKHQAKKGKEVKPYNFDMKQVDAFRYRM 484 Query 659 LSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAP-TVQE 714 + + + + + K+ + + H L P VQ Sbjct 485 GDALRAVTSIAVQEAKAREIRQELMKSEKLKRHFEENPSDLYHLRHDGELRPARVQA 541 Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 4/103 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 A F+ +G+ + Q + + ++ PT +Q+++IPL L G D+L A+TGSGKT A+ +P++ Sbjct 24 ATFASLGLDARLLQGIAKQNFQSPTLVQSKAIPLTLEGRDILARAKTGSGKTAAYLLPIL 83 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + ++E + T + Y +F Sbjct 84 HSILK----RKELSPTQCTSALILVPTRELADQVYKTVESFTA 122 >sp|Q0CQF3|SPB4_ASPTN ATP-dependent rRNA helicase spb4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=spb4 PE=3 SV=1 Length=639 Score = 211 bits (537), Expect = 7e-58, Method: Composition-based stats. Identities = 88/402 (22%), Positives = 157/402 (39%), Gaps = 73/402 (18%) Query 262 PDGYIVKSQHSGNAQVTQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP--- 316 G + ++ + + + A+I+ P+RELA Q + + Sbjct 61 GSGKTLSFLVPVVEKLLRLEEPIKKHHIGAIIISPTRELASQIHQVLLSLLAFHPPSAAA 120 Query 317 -------------------KLRELLIIGG--VAARDQLSVLENGVDIVVGTPGRLDDLVS 355 K+ L++GG A D L++ ++++ TPGRL +L+S Sbjct 121 IKPPGEDDAPREKFSASTLKVVPQLLLGGSTTPAEDLSYFLKHSPNVLISTPGRLLELLS 180 Query 356 TGKLNL--SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 + ++ S LVLDEAD LL G+ + + + ++P K+ + + SA++ S Sbjct 181 SPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLP------KQRRTGLFSASI-SE 233 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 V ++ + P V +K + + + R L +++ T H Sbjct 234 AVDQIVRVGLRNPVKVLVKVKGT-----------SGVQDKRTPASLQMTYLTTPPAHKFL 282 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 RP + + + I F T D L P Sbjct 283 TLRP--------------------ILTSLQPTPQKTIFFVSTCSGVDYLAAIL------P 316 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTL 592 G F + LHG + R++N RF L+ TDVA+RG+DI V V+ + Sbjct 317 LLLGDDFQLIPLHGKHPANVRQKNFNRFINAHTPSILLTTDVASRGLDIPSVDLVVQIDP 376 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 P + + ++HR GR GRA R G+++ L+ +E+ + R Sbjct 377 PSDPKTFIHRCGRAGRAGRRGVSVVLLHPGREEDYVSFLEVR 418 Score = 87.1 bits (214), Expect = 2e-16, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 40/94 (43%), Gaps = 4/94 (4%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + + AV + T +QA +IPL + DV++ A TGSGKT +F +PV++ + Sbjct 21 LSEWVLDAVASWGFSKMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLVPVVEKLLRL- 79 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +E K S + + + Sbjct 80 ---EEPIKKHHIGAIIISPTRELASQIHQVLLSL 110 >sp|A6ZU15|ROK1_YEAS7 ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=ROK1 PE=3 SV=1 Length=564 Score = 209 bits (532), Expect = 8e-58, Method: Composition-based stats. Identities = 105/519 (20%), Positives = 186/519 (36%), Gaps = 80/519 (15%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPP 251 IG + D+ F + + ++ ++ + + Sbjct 117 IGSFEDLISR-FSFDR---------RLLNNLIENGFTEPTPIQCECIPVALNNRD----- 161 Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 +A G + Q+ K K LI+ P++ELA Q + Sbjct 162 ---VLACGPTGSGKTLAFLIPLVQQIIDDKQT-AGLKGLIISPTKELANQIFIECFKLSH 217 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGV------DIVVGTPGRLDDLVSTGKLNLSQVR 365 I K R L + + ++ + L+N V DI++ TP RL D+V L+LS+V+ Sbjct 218 KIFLEKKRPLQV--ALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNEALDLSKVK 275 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 L+ DEAD L + + + + + + L+ + SAT+ S +V+++++ IM Sbjct 276 HLIFDEADKLFDKTFVEQSDDILSAC-----REPSLRKAMFSATIPS-NVEEIAQSIMMD 329 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P V + +++ + ++ + +L + + + G P Sbjct 330 PVRVIIGHKEAANTNIEQKLIFCGNEEGKL-------------IAIRQLVQEGEFKP--- 373 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 IIF + L + + + + Sbjct 374 ----------------------PIIIFLESITRAKALYHELMYD---------RINVDVI 402 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 H +R +R + +ERFK G++ LICTDV ARGID GV VIN +P Q YVHRIGR Sbjct 403 HAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVNLVINYDVPGSSQAYVHRIGR 462 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 GR R G AI+ + + + + D + E + + + H Sbjct 463 TGRGGRSGKAITFYTKQDSVAIKPIINVMKQSGCEVSEWMDKMAKMTRKEKESIKNGKAH 522 Query 666 LNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGH 704 P + ++ KR K H Sbjct 523 KERKQITTVPKMDKAKRRRQQEMIAASKRRKNEELSKKH 561 Score = 90.2 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 29/91 (32%), Positives = 41/91 (45%), Gaps = 6/91 (7%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F ++ + + E + PT IQ E IP+ L DVL TGSGKT AF Sbjct 117 IGSFEDLISRFSFDRRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAF 176 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASV 87 IP++Q + + Q G KG T Sbjct 177 LIPLVQQIIDD--KQTAGLKGLIISPTKELA 205 >sp|P45818|ROK1_YEAST ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ROK1 PE=1 SV=1 Length=564 Score = 209 bits (532), Expect = 8e-58, Method: Composition-based stats. Identities = 106/519 (20%), Positives = 186/519 (36%), Gaps = 80/519 (15%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPP 251 IG + D+ F K + ++ ++ + + Sbjct 117 IGSFEDLISR-FSFDK---------RLLNNLIENGFTEPTPIQCECIPVALNNRD----- 161 Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 +A G + Q+ K K LI+ P++ELA Q + Sbjct 162 ---VLACGPTGSGKTLAFLIPLVQQIIDDKQT-AGLKGLIISPTKELANQIFIECFKLSY 217 Query 312 YIDNPKLRELLIIGGVAARDQLSVLENGV------DIVVGTPGRLDDLVSTGKLNLSQVR 365 I K R L + + ++ + L+N V DI++ TP RL D+V L+LS+V+ Sbjct 218 KIFLEKKRPLQV--ALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNEALDLSKVK 275 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 L+ DEAD L + + + + + + L+ + SAT+ S +V+++++ IM Sbjct 276 HLIFDEADKLFDKTFVEQSDDILSAC-----REPSLRKAMFSATIPS-NVEEIAQSIMMD 329 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 P V + +++ + ++ + +L + + + G P Sbjct 330 PVRVIIGHKEAANTNIEQKLIFCGNEEGKL-------------IAIRQLVQEGEFKP--- 373 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 IIF + L + + + + Sbjct 374 ----------------------PIIIFLESITRAKALYHELMYD---------RINVDVI 402 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 H +R +R + +ERFK G++ LICTDV ARGID GV VIN +P Q YVHRIGR Sbjct 403 HAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVNLVINYDVPGSSQAYVHRIGR 462 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 GR R G AI+ + + + + D + E + + + H Sbjct 463 TGRGGRSGKAITFYTKQDSVAIKPIINVMKQSGCEVSEWMDKMAKMTRKEKESIKNGKAH 522 Query 666 LNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGH 704 P + ++ KR K H Sbjct 523 KERKQITTVPKMDKAKRRRQQEMIAASKRRKNEELSKKH 561 Score = 90.2 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 29/91 (32%), Positives = 41/91 (45%), Gaps = 6/91 (7%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F ++ + + E + PT IQ E IP+ L DVL TGSGKT AF Sbjct 117 IGSFEDLISRFSFDKRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAF 176 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASV 87 IP++Q + + Q G KG T Sbjct 177 LIPLVQQIIDD--KQTAGLKGLIISPTKELA 205 >sp|Q0DWT8|RH1_ORYSJ DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0795900 PE=2 SV=1 Length=521 Score = 208 bits (529), Expect = 8e-58, Method: Composition-based stats. Identities = 89/435 (20%), Positives = 161/435 (37%), Gaps = 55/435 (13%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL-------- 336 +AL+V P+R+LA Q L +G + D++S L Sbjct 109 RCLRALVVLPTRDLALQVKEVFDAIA---PVVGLSVGSAVGQSSIADEVSNLIEKSKQGL 165 Query 337 -------------ENGVDIVVGTPGRLDDLVS-TGKLNLSQVRFLVLDEADGLLSQGYSD 382 + VDI+V TPGRL D +S T +L +++LV+DE D +L + Y Sbjct 166 FPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGFSLEHLQYLVVDETDRMLREAYQS 225 Query 383 FINRMHNQIPQVTSDGK----RLQVIVCS-ATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 ++ + + + ++ T+ V++ K FP + + Sbjct 226 WLPTVIQLTRSSDQNHSWSDMNGETLLHPLTTIRRSGVER-GFKGKSFPRL----AKIVL 280 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 T+ +L + + + + + S ++ ++ LK Sbjct 281 SATLTQ-------DPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYKLVCKSN--LKPLSL 331 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE--RK 555 + ++E + ++ ++F + L P K R E R+ Sbjct 332 IVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEY--------SRLQRESTRR 383 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLA 615 + L+ FK+G + LI TD ARGI I G+ YVIN +P + Y+HR GR RA G Sbjct 384 KTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSC 443 Query 616 ISLVATEKEKVWYHVC-SSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 + + + K + + + C L E+ T+ L ++EE L ++ Sbjct 444 FTFLRKHEVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSALKKLEESLESEATKKS 503 Query 675 PDIKVPVDEFDGKVT 689 + K T Sbjct 504 KSGDKAPNASKRKRT 518 Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 22/125 (18%), Positives = 45/125 (36%), Gaps = 21/125 (17%) Query 1 MAAFSEMG------VMPEIAQAVEEMDWLLPTDIQAESI-----PLILGGGDVLMAAETG 49 + +FS + P + + ++ M +Q + P D+ + + TG Sbjct 30 IDSFSGCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAFE-RDICINSPTG 88 Query 50 SGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 SGKT A+++P++Q++ +K + + + A A GL Sbjct 89 SGKTLAYALPIVQMLA--------TRKVRCLRALVVLPTRDLALQVKEVFDAIAP-VVGL 139 Query 110 CCQSR 114 S Sbjct 140 SVGSA 144 >sp|P0CR08|SPB4_CRYNJ ATP-dependent rRNA helicase SPB4 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=SPB4 PE=3 SV=1 Length=748 Score = 213 bits (541), Expect = 9e-58, Method: Composition-based stats. Identities = 95/531 (18%), Positives = 183/531 (34%), Gaps = 97/531 (18%) Query 262 PDGYIVKSQHSGNAQVTQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 G + ++++ + + A++V P+RELA Q F + P+ Sbjct 62 GSGKTLAFTIPVLERLSRREEPYKKGEIAAIVVAPTRELATQIHAVFHHFLSSLIPPESE 121 Query 320 --------------------------------ELLIIGGVAARDQLSVLENGVDIVVGTP 347 +L+ G + + I++GTP Sbjct 122 EETGDVEAHAPPFASSSRSPSPQTPDKPLFPLPMLVTSGTPTPYE-TFQSTHPSILIGTP 180 Query 348 GRLDDLVSTGK----LNLSQVRFLVLDEADGLLSQ-GYSDFINRMHNQIPQVTSDGKRLQ 402 GRL + + + +S++ LVLDEAD LLS + + R+ +P K+ + Sbjct 181 GRLAAFLLNPRGLAIVRVSELDVLVLDEADRLLSSPDHRRDVERIMRHLP------KQRR 234 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ V+++ + P + + +D D PK R L + Sbjct 235 THLFSATMTDA-VEEMIGLGLRNPVRIVVNLKDKRKDG-------EEPKERRTPMALQNT 286 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 ++ E + I++L E +H+ + I++ T D Sbjct 287 YLVC-------------RHAEKTLQLIRLLLCE-----STKHERSKFIVYFSTCAAVDYF 328 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-----FLICTDVAAR 577 + + +F HG+ P R+ L F L+CTDVAAR Sbjct 329 YRILSRLPSL-----SKFHLTSFHGELPPKIRETALSTFTSHPSSHLSPAVLLCTDVAAR 383 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY-HVCSSRGK 636 G+D + VI P + + + HR GR RA R G A+ L+ +E+ + S+ + Sbjct 384 GVDFLDIDVVIQYDAPTDPKTFSHRAGRTARAGRRGKAVVLLGKGREEDYVGTFQSANAE 443 Query 637 GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD--------------IKVPVD 682 R K + N ++ + ++N + +V+ ++ + Sbjct 444 LMKRKRQKAQRSILDFLNIRKIPLTKQPYINAYLEEVDTPQALDPEATTLLHSIRQIILT 503 Query 683 EFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLP 733 + + + + +Y H + + L L +P Sbjct 504 DRELSDKAAKSFVSAFRAYSKHEASFIFRTLDFDFNSQAISFGLLRLPAMP 554 Score = 91.7 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 6/102 (6%) Query 3 AFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++++ + P I + M + T +QA +IP + D ++ A TGSGKT AF+IPV Sbjct 14 SWAKLNPPLSPWILDVINSMGFKNMTPVQAGTIPRAVKNQDCVVEAVTGSGKTLAFTIPV 73 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + E L ++E K + + + F Sbjct 74 L----ERLSRREEPYKKGEIAAIVVAPTRELATQIHAVFHHF 111 >sp|P0CR09|SPB4_CRYNB ATP-dependent rRNA helicase SPB4 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=SPB4 PE=3 SV=1 Length=748 Score = 213 bits (541), Expect = 9e-58, Method: Composition-based stats. Identities = 95/531 (18%), Positives = 183/531 (34%), Gaps = 97/531 (18%) Query 262 PDGYIVKSQHSGNAQVTQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLR 319 G + ++++ + + A++V P+RELA Q F + P+ Sbjct 62 GSGKTLAFTIPVLERLSRREEPYKKGEIAAIVVAPTRELATQIHAVFHHFLSSLIPPESE 121 Query 320 --------------------------------ELLIIGGVAARDQLSVLENGVDIVVGTP 347 +L+ G + + I++GTP Sbjct 122 EETGDVEAHAPPFASSSRSPSPQTPDKPLFPLPMLVTSGTPTPYE-TFQSTHPSILIGTP 180 Query 348 GRLDDLVSTGK----LNLSQVRFLVLDEADGLLSQ-GYSDFINRMHNQIPQVTSDGKRLQ 402 GRL + + + +S++ LVLDEAD LLS + + R+ +P K+ + Sbjct 181 GRLAAFLLNPRGLAIVRVSELDVLVLDEADRLLSSPDHRRDVERIMRHLP------KQRR 234 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 + SAT+ V+++ + P + + +D D PK R L + Sbjct 235 THLFSATMTDA-VEEMIGLGLRNPVRIVVNLKDKRKDG-------EEPKERRTPMALQNT 286 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 ++ E + I++L E +H+ + I++ T D Sbjct 287 YLVC-------------RHAEKTLQLIRLLLCE-----STKHERSKFIVYFSTCAAVDYF 328 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-----FLICTDVAAR 577 + + +F HG+ P R+ L F L+CTDVAAR Sbjct 329 YRILSRLPSL-----SKFHLTSFHGELPPKIRETALSTFTSHPSSHLSPAVLLCTDVAAR 383 Query 578 GIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWY-HVCSSRGK 636 G+D + VI P + + + HR GR RA R G A+ L+ +E+ + S+ + Sbjct 384 GVDFLDIDVVIQYDAPTDPKTFSHRAGRTARAGRRGKAVVLLGKGREEDYVGTFQSANAE 443 Query 637 GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD--------------IKVPVD 682 R K + N ++ + ++N + +V+ ++ + Sbjct 444 LMKRKRQKAQRSILDFLNIRKIPLTKQPYINAYLEEVDTPQALDPEATTLLHSIRQIILT 503 Query 683 EFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLP 733 + + + + +Y H + + L L +P Sbjct 504 DRELSDKAAKSFVSAFRAYSKHEASFIFRTLDFDFNSQAISFGLLRLPAMP 554 Score = 91.7 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 6/102 (6%) Query 3 AFSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +++++ + P I + M + T +QA +IP + D ++ A TGSGKT AF+IPV Sbjct 14 SWAKLNPPLSPWILDVINSMGFKNMTPVQAGTIPRAVKNQDCVVEAVTGSGKTLAFTIPV 73 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + E L ++E K + + + F Sbjct 74 L----ERLSRREEPYKKGEIAAIVVAPTRELATQIHAVFHHF 111 >sp|A7TFZ9|DBP6_VANPO ATP-dependent RNA helicase DBP6 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP6 PE=3 SV=1 Length=637 Score = 211 bits (536), Expect = 9e-58, Method: Composition-based stats. Identities = 99/521 (19%), Positives = 197/521 (38%), Gaps = 68/521 (13%) Query 198 IDKGHVKF-------SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFP 250 ++ + + + +D + ++ +++ +++ L+ F + Sbjct 160 LNTETIHYDSSMVRKFSDFEDQ-IDPKLLKNIQQNFSTDTFPIQSILLETLLPTLNFSYN 218 Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP-------NAPKALIVEPSRELAEQTL 303 + D + S SG L N +AL++ P++ L Q Sbjct 219 ITKKNFT-RRVGDVLVNASTGSGKTLAYSIPILQILSKRTVNKLRALVIVPTKLLINQVY 277 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 + + + + + +L+N DI++ TPGRL D + +G +NL Sbjct 278 ETFNNLAQ--GTSLIVSISKLENSLKEENKKLLQNEPDILITTPGRLVDHLQSGAVNLRN 335 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK--RLQVIVCSATLHSFDVKKLSEK 421 ++FLVLDEAD LL+Q + ++ N + N++ D + +V SATL + + +KL Sbjct 336 LKFLVLDEADRLLNQSFQNWCNELLNKLKTDKQDHMPGNIVKMVFSATLTT-NTEKLHGL 394 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 + P + V + K L L + ++ Sbjct 395 QFYNPK----------------LFVMDSVKLYHLPRMLQEYNLHIPTAKTSY-------- 430 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 K + +R + E + ++F ++ +L + K G QF Sbjct 431 -----------KPLFLLRLLSEINGSKMLVFVKSNES--SLRLASLLSIMIEHKLGSQFD 477 Query 542 CVCLHGDRKPHERKQNLERF----KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 ++ + E ++ + F V+ LI TDV +RG+DI+ + V+N +P Q Sbjct 478 INSVNSNNTKAENRRIVNEFASNNNTSKVQVLITTDVMSRGVDINDITDVLNYDVPISSQ 537 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWY--HVCSSRGKGCYNTRLKEDGGCTIWYNE 655 Y+HR GR RA+ G A +++ + E+ ++ H+ + + + + G N+ Sbjct 538 QYIHRCGRTARAQSKGTAYNMLIGKGERTFWATHIDNDISRDIDGCQ-PQVWGQHDQQNQ 596 Query 656 MQLLSEIEE---HLNCTISQVEPDIKVPVDEFDGKVTYGQK 693 E E L + E K ++ KV +K Sbjct 597 KDEGQEEEAQVLPLLTVDPETESIYKECLNSLKEKVDTNRK 637 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 25/87 (29%), Positives = 45/87 (52%), Gaps = 22/87 (25%) Query 1 MAAFSEM--GVMPEIAQAVEEMDWLLPT-DIQA---ESIPLILG--------------GG 40 + FS+ + P++ + +++ ++ T IQ+ E++ L G Sbjct 172 VRKFSDFEDQIDPKLLKNIQQ-NFSTDTFPIQSILLETLLPTLNFSYNITKKNFTRRVG- 229 Query 41 DVLMAAETGSGKTGAFSIPVIQIVYET 67 DVL+ A TGSGKT A+SIP++QI+ + Sbjct 230 DVLVNASTGSGKTLAYSIPILQILSKR 256 >sp|A5DEZ5|MS116_PICGU ATP-dependent RNA helicase MSS116, mitochondrial OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=MSS116 PE=3 SV=2 Length=714 Score = 212 bits (539), Expect = 1e-57, Method: Composition-based stats. Identities = 84/462 (18%), Positives = 159/462 (34%), Gaps = 73/462 (16%) Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQ-------VTQTKFLPNAPK---- 288 +N + + + + G +V+++ + P + Sbjct 90 YNSKMKNMTVVQQRAIMPMMDTKTGVVVRAKTGTGKTLAFALPCIQAALENPQQTQKGRI 149 Query 289 -ALIVEPSRELAEQTLNNIKQFKKYIDNPKLR---ELLIIGGVAARDQLSVLENGVDIVV 344 AL+V P+R+LA Q K+ ++ R ++IGG R + IV+ Sbjct 150 QALVVAPTRDLALQIEAEFKKVLQHQTRNVHRKTDTFVLIGG---RKNDLHPKAKAAIVI 206 Query 345 GTPGRLDDLVSTGKL--NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS----DG 398 TPGRL+ ++ ++ S +++ V DEAD LL QG++ + + ++ + Sbjct 207 ATPGRLEAILRDPRMLPMFSDLKYRVYDEADRLLDQGFAPTLEVIEERLRDAKAEALEPD 266 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDTVHHVVVPVNPKTDRLW 456 + + SAT+ E I +++ +D + +H +V D Sbjct 267 NHFKTALFSATVDDAVTNFAHETIGKEYEYINCVDKDAEESHENIHQGIVRTQSIKDSFE 326 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 +D K +AI+F T Sbjct 327 ASFSYILNHIND------------------------------------KYFKAIVFLPTI 350 Query 517 IDCDNLEQYFIQQ------GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 + + + K + + LHG R + ++ F++ L+ Sbjct 351 TGTEYYYRVLQRAKREELYDSETATKKYGSRILRLHGKMSQSARDRTVKEFRRTSHGVLV 410 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 CTDVAARG+D + V +VI + +Y+H+IGR RA G A ++ + K + Sbjct 411 CTDVAARGLDFNDVSHVIQMCPSSSVADYIHKIGRTARAGARGKARIFISEPEMKFIETL 470 Query 631 CSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 RG KED + + + + Sbjct 471 QRERGIVF-----KEDTEYVKDETSPDHFQRLGSYEQDALEE 507 Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 39/103 (38%), Gaps = 9/103 (9%) Query 4 FSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGD-VLMAAETGSGKTGAFSI 58 F+ + I + + T +Q +I ++ V++ A+TG+GKT AF++ Sbjct 72 FTSLEASRKFDKSIFRGLYNSKMKNMTVVQQRAIMPMMDTKTGVVVRAKTGTGKTLAFAL 131 Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA 101 P IQ E + Q+G+ + + Sbjct 132 PCIQAALENPQQTQKGR----IQALVVAPTRDLALQIEAEFKK 170 >sp|Q751D1|DBP6_EREGS ATP-dependent RNA helicase DBP6 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP6 PE=3 SV=1 Length=607 Score = 209 bits (533), Expect = 1e-57, Method: Composition-based stats. Identities = 71/351 (20%), Positives = 142/351 (40%), Gaps = 45/351 (13%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-NGVDIV 343 N +A+I+ P++ L Q + ++ K + + + +++ + L+ D++ Sbjct 245 NKLRAVILVPTKLLVHQVYDTVQALAK---GSSVVVAVSKMDTSLKEESAKLKAQEPDVL 301 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 + TPGRL D ++ +L ++FLVLDEAD LL+Q + ++ + ++ V Sbjct 302 IITPGRLVDHLNMQTFSLKNLKFLVLDEADRLLNQSFQNWCIELMTRLNAERPFKGPGNV 361 Query 404 --IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 ++ SATL + + ++L + +H P + +P + L K Sbjct 362 IKMIFSATLTT-NTERLHDLQLHNPKLFLMGS--------QLYHMPAQLQEYNLPIPTSK 412 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 S+ + + + + ++F ++ Sbjct 413 SYAKPLILLRLLPLLSTESL--------------------------RILVFVKSNEASIR 446 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF---KKGDVRFLICTDVAARG 578 L G + ++ + ++ +E F G L+ TD+ +RG Sbjct 447 LAALLTAMVGNGLSAVST-TVGSINNNNSKATNRKLIEAFAAGASGHCSILVSTDLMSRG 505 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 +DI G+ +VIN LP Q YVHR GR RA G A++L+ + E+ ++ Sbjct 506 LDISGISHVINYDLPISSQQYVHRCGRTARANTSGTAVNLLVGKGEQNFWK 556 Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats. Identities = 20/67 (30%), Positives = 32/67 (48%), Gaps = 10/67 (15%) Query 41 DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQM-NPYDRG 99 D+L+ A TGSGKT A+++ +I I+ ++ ++ V K + YD Sbjct 216 DILVNASTGSGKTLAYAMLLIHIL---------SRRTVNKLRAVILVPTKLLVHQVYDTV 266 Query 100 SAFAIGS 106 A A GS Sbjct 267 QALAKGS 273 >sp|Q9CWT6|DDX28_MOUSE Probable ATP-dependent RNA helicase DDX28 OS=Mus musculus OX=10090 GN=Ddx28 PE=2 SV=2 Length=540 Score = 208 bits (529), Expect = 1e-57, Method: Composition-based stats. Identities = 86/410 (21%), Positives = 142/410 (35%), Gaps = 69/410 (17%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN-------------APKALIVE 293 L + SG AP+ L++ Sbjct 151 PTSVQSKTIPPLLRGRHLLCAAETGSGKTLSYLLPLFQRLLRGSDLDSRSFTAPRGLVLV 210 Query 294 PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV--DIVVGTPGRLD 351 PSRELAEQ + Y+ L+ + + GG+ L D++V TPG L Sbjct 211 PSRELAEQVQAVAQSLGGYLG---LQVIELGGGLGMSRLKLQLYRRPAADVLVATPGALW 267 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSD-------GKRLQVI 404 + + ++L + F+VLDE D LL + + + ++ + + P S + Q++ Sbjct 268 KALKSQLISLQHLNFIVLDEVDTLLDESFLELVDYILEKSPIAESPAELEDPFNPKAQLV 327 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + AT + ++ ++ V K H Sbjct 328 LVGATFP---------------------------EGLNQLLSKVTSPDSLTTITSSKLHC 360 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 V T + +E ++ILK + +A K ++FC + + L Sbjct 361 LMPHVR---QTFMRLKGADKVTELVQILKQQD--KASKTEPSGTVLVFCNSASTVNWLGY 415 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 H+ + L G R + F+KG L+CTD+A+RG+D V Sbjct 416 IL---------DDHKIQHLRLQGQMPASMRAGIFQSFQKGSQNILVCTDIASRGLDSVHV 466 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERM--GLAISLVA-TEKEKVWYHVC 631 VIN P Q+Y+HR GRVGR G IS V + + Sbjct 467 EVVINYDFPPTLQDYIHRAGRVGRVGSEVPGSVISFVTHPWDVSLVQKIE 516 Score = 79.8 bits (195), Expect = 3e-14, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 44/66 (67%), Gaps = 2/66 (3%) Query 3 AFSEMGVMPEIAQAVEEM--DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +F ++G+ P + A++E + + PT +Q+++IP +L G +L AAETGSGKT ++ +P+ Sbjct 127 SFVDLGLEPRVLLALQEAVPEVVQPTSVQSKTIPPLLRGRHLLCAAETGSGKTLSYLLPL 186 Query 61 IQIVYE 66 Q + Sbjct 187 FQRLLR 192 >sp|A1C7F7|DBP9_ASPCL ATP-dependent RNA helicase dbp9 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dbp9 PE=3 SV=1 Length=621 Score = 209 bits (533), Expect = 2e-57, Method: Composition-based stats. Identities = 112/565 (20%), Positives = 197/565 (35%), Gaps = 69/565 (12%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 ++L L + + + +++ + +A +K G Sbjct 29 FENLNLDPRLRQALIKEQFTKPTPVQSKAIPLAL--------EGKDILARAKTGSGKTAA 80 Query 269 SQHSGNAQVTQTKFLPN---APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + Q K A LI+ P+RELAEQ + I +F + +R + + Sbjct 81 YVLPILQTILQKKAADPSLKATTGLILVPTRELAEQVQSVITKFTAFC-GKDVRSVNLTQ 139 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 V+ Q ++L + D++V TP R+ + + L L + LV+DEAD +LS GY + IN Sbjct 140 KVSDAVQRTMLADYPDLIVSTPARVIANLGSSALALDNLTHLVIDEADLVLSYGYDEDIN 199 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IP + +Q + SATL S +V L P + L+ ++ + V Sbjct 200 ALAKAIP------RGVQTFLMSATLTS-EVDTLKGLFCRNPVVLKLEDKEDEGAGISQFV 252 Query 446 VPVNPKTDRLWERLGKSHIRTD-----DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 V L + V D E + +L E + + Sbjct 253 VRCAEDEKFLLTYVIFKLQLIKGKVIIFVGDIDRCYRVKLFLEQFGIKSCVLNSELPINS 312 Query 501 IKEHKMD------QAII-------------FCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + II F ++K D E+ + G + + ++ Sbjct 313 RIHVVQEFNKGVYDIIIAADEQEVMGARTTFKKSKEITDGDEEETRDKMGSSEDEDNEPE 372 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 RK + KG + +RGID V V+N LP ++Y H Sbjct 373 DNDKKSAHPEKRRKTS----GKGKDYGI------SRGIDFQNVACVLNFDLPTTSKSYTH 422 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 RIGR GRA + G+A+S V E + + E I + +L E Sbjct 423 RIGRTGRAGKAGMALSFVVPADE-----FGKHKPTSFPTAKYDESVLAKIVKRQAKLDHE 477 Query 662 IEEHLNCTISQVEPDIKVPVDEFD---------GKVTYGQKRAAGGGSYKGHVDILAPTV 712 ++ + + QV+ D + ++ K H + + Sbjct 478 VKP-YHFEMKQVDAFRYRMTDALRSVTRLAIQEARAREIRQELVKSEKLKRHFEENPEEL 536 Query 713 QELA-ALEKEAQTSFLHLGYLPNQL 736 ++L E A HL ++P+ L Sbjct 537 KQLRHDGELRAARIQPHLKHIPDYL 561 Score = 103 bits (256), Expect = 2e-21, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 47/103 (46%), Gaps = 3/103 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P + QA+ + + PT +Q+++IPL L G D+L A+TGSGKT A+ +P++ Sbjct 27 TDFENLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPIL 86 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + + K T + + F Sbjct 87 QTILQKKAADPSLK---ATTGLILVPTRELAEQVQSVITKFTA 126 >sp|Q6FN65|ROK1_CANGA ATP-dependent RNA helicase ROK1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=ROK1 PE=3 SV=1 Length=565 Score = 208 bits (529), Expect = 2e-57, Method: Composition-based stats. Identities = 108/523 (21%), Positives = 191/523 (37%), Gaps = 84/523 (16%) Query 182 YGEEFTMHDT---IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAEL 238 Y T D IG + D+ L + ++ ++ + Sbjct 106 YKGNITGEDIPLPIGSFEDLISR----------FSLDKRLLNNLIENHFTEPTPIQCEAI 155 Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 +A + G + Q+ + K + K LI+ P++EL Sbjct 156 PLCLN--------GRDLLACAPTGSGKTLAFLIPLLQQIIEEKNF-SGVKGLIISPTKEL 206 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV------DIVVGTPGRLDD 352 A Q N + K I K R L + + ++ + L N V D+++ TP RL D Sbjct 207 ATQIFNECVKLSKRIYLDKKRPLQV--AILSKSLGAKLRNKVISDKKYDLIISTPLRLID 264 Query 353 LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS 412 +V L+LS V+ L+ DEAD L + + + + + N + + SAT+ S Sbjct 265 VVKNEALDLSNVKHLIFDEADKLFDKTFIEQTDDILNSCTDPSMRKS-----MFSATIPS 319 Query 413 FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAK 472 V++ + IM+ P V + +++ + ++ + +L + + Sbjct 320 -SVEETANSIMNDPVRVIIGHKEAANTNIEQKLIFCGNEEGKL-------------IAIR 365 Query 473 DNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG 532 + G P IIF + L + Sbjct 366 QLVQQGEFKP-------------------------PIIIFLESIARAKALYHELMYD--- 397 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 + + +H +R +R++ +ERFK G++ LICTDV ARGID GV VIN + Sbjct 398 ------RINVDVIHAERTAIQREKIIERFKTGELWCLICTDVLARGIDFKGVNLVINYDV 451 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIW 652 P Q YVHRIGR GR R G A++L + + + + I Sbjct 452 PTTAQAYVHRIGRTGRGGRSGKAVTLYTKLDSVAIKPIINVMKQSGCEVEGWMNNISKIT 511 Query 653 YNEMQLLSEIEEHLN-CTISQVEPDIKVPVDEFDGKVTYGQKR 694 E + + + + H IS V ++ + + ++R Sbjct 512 KREKEAIKKGKSHKERDQISTVPKVERLKRKKKQDMIRASKRR 554 Score = 97.1 bits (240), Expect = 1e-19, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 46/110 (42%), Gaps = 11/110 (10%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F ++ + + + E + PT IQ E+IPL L G D+L A TGSGKT AF Sbjct 119 IGSFEDLISRFSLDKRLLNNLIENHFTEPTPIQCEAIPLCLNGRDLLACAPTGSGKTLAF 178 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 IP++Q + E K S + ++ + Sbjct 179 LIPLLQQIIE-------EKNFSGVKGLIISPTKELATQIFNECVKLSKRI 221 >sp|Q6CSW1|ROK1_KLULA ATP-dependent RNA helicase ROK1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=ROK1 PE=3 SV=1 Length=579 Score = 208 bits (530), Expect = 2e-57, Method: Composition-based stats. Identities = 104/508 (20%), Positives = 186/508 (37%), Gaps = 77/508 (15%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPP 251 IG + D+ +F K + ++ +++ + E + Sbjct 128 IGSFEDLITR-FQFDK---------RLLNNLIENNFTEPTPIQSESIPILLHERD----- 172 Query 252 KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK 311 +A + G + Q+ K K LI+ P++ELA Q + Sbjct 173 ---MIACAPTGSGKTLAFLIPLLQQIINDKTTV-GLKGLIISPTKELANQIFIECSKLAN 228 Query 312 YIDNPKLRELLIIGGVAARDQLSVL----ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 I K R L + + E+ DI++ TP RL +V LNL +V+ L Sbjct 229 KIYLDKKRPLQVALLSKSLSSKLKNKVISEDKYDIIISTPLRLITVVQEEALNLGKVKHL 288 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 + DEAD L + + + + + + + L+ + SAT+ S +V+++++ IM+ P Sbjct 289 IFDEADKLFDKTFVEQTDDILS-----SCTDPHLRKTMFSATIPS-NVEEIAQTIMNDPI 342 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 V + +++ + +V + +L Sbjct 343 RVIIGHKEAANINIDQQLVFCGNEEGKLIAIRQL-------------------------- 376 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 ++ IIF + L + + + +H Sbjct 377 ------------VLEGEFKPPVIIFLESITRAKALFHELLYD---------KLNVDVIHA 415 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 +R +R + +ERFK GD+ LICTDV ARG+D GV VIN +P Q YVHRIGR G Sbjct 416 ERTQVQRDKIIERFKSGDLWCLICTDVLARGVDFKGVNLVINYDVPRSAQAYVHRIGRTG 475 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 R R G AI+ + + + + ++ E + L + + H+ Sbjct 476 RGGRSGKAITFYTKQDSLAIKPIINVMKQSGCEVSEWMQKISSMSKREKESLKKGKGHVE 535 Query 668 -CTISQVEPDIKVPVDEFDGKVTYGQKR 694 IS V +K + + +KR Sbjct 536 RKQISTVPKVVKQKKRQRREMIEASKKR 563 Score = 88.3 bits (217), Expect = 8e-17, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 48/107 (45%), Gaps = 11/107 (10%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAF 56 + +F ++ + + E ++ PT IQ+ESIP++L D++ A TGSGKT AF Sbjct 128 IGSFEDLITRFQFDKRLLNNLIENNFTEPTPIQSESIPILLHERDMIACAPTGSGKTLAF 187 Query 57 SIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 IP++Q + G KG S + + S A Sbjct 188 LIPLLQQIIND--KTTVGLKG-----LIISPTKELANQIFIECSKLA 227 >sp|Q2UBZ5|SPB4_ASPOR ATP-dependent rRNA helicase spb4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=spb4 PE=3 SV=1 Length=638 Score = 208 bits (530), Expect = 5e-57, Method: Composition-based stats. Identities = 90/402 (22%), Positives = 160/402 (40%), Gaps = 73/402 (18%) Query 262 PDGYIVKSQHSGNAQVTQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP--- 316 G + ++ + + + A+I+ P+RELA Q + + + Sbjct 61 GSGKTLSFLIPIVEKLLRLEEPIKKHHVGAIIISPTRELASQIYHVLLSLLAFHPPSASV 120 Query 317 -------------------KLRELLIIGG--VAARDQLSVLENGVDIVVGTPGRLDDLVS 355 K+ L++GG A D L+ +++V TPGRL +L+S Sbjct 121 INPSEDDDVPRQKFPSSTLKVVPQLLLGGSTTPAEDLSKFLKQSPNLLVSTPGRLLELLS 180 Query 356 TGKLNL--SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 + ++ S LVLDEAD LL G+ + + + ++P K+ + + SA++ S Sbjct 181 SPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNIIRRLP------KQRRTGLFSASI-SE 233 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 V ++ + P V +K + + + R L +++ T +H D Sbjct 234 AVDQIVRVGLRNPVKVMVKVKGT-----------SGAQDKRTPASLQMTYLTTPTIHKFD 282 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 + +S + + + I F T D L P Sbjct 283 ALKHILHSVDPTPQ--------------------KTIFFASTCSGVDYLSAIL------P 316 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTL 592 G F + LHG + R++N RF L+ TDVA+RG+DI V V+ + Sbjct 317 LILGDDFQLISLHGKHPANVREKNFNRFVNSYSPAILLTTDVASRGLDIPSVDLVVQIDP 376 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 P + + ++HR GR GRA R GL++ L+ +E+ + R Sbjct 377 PSDPKTFIHRCGRAGRAGRRGLSVVLLHPGREEDYVSFLEVR 418 Score = 92.5 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 41/88 (47%), Gaps = 4/88 (5%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + + +AV M + T +QA +IPL + DV++ A TGSGKT +F IP+++ + Sbjct 21 LSEWVLEAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPIVEKLLRL- 79 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPY 96 +E K S + Y Sbjct 80 ---EEPIKKHHVGAIIISPTRELASQIY 104 >sp|A6R2L6|DBP9_AJECN ATP-dependent RNA helicase DBP9 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=DBP9 PE=3 SV=1 Length=625 Score = 208 bits (529), Expect = 6e-57, Method: Composition-based stats. Identities = 112/571 (20%), Positives = 197/571 (35%), Gaps = 73/571 (13%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG---- 264 + L L + + Q ++ + DG L++A G Sbjct 26 FETLKLDPRLLQALTQQKFTKPTPIQAEAIPLAL----------DGKDVLARAKTGSGKT 75 Query 265 --YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 Y++ S Q + + ALI+ P+RELAEQ F + +R + Sbjct 76 AAYLLPVLQSILQQ-KRNTPAHKSISALILVPTRELAEQVHRTAISFSAF-SGKHVRSVN 133 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 + V+ Q S+L + DIVV TP R V++ L+L ++ LV+DEAD +LS GY + Sbjct 134 LTQKVSDAVQRSLLADLPDIVVSTPARAVANVNSSALSLERLTHLVIDEADLVLSYGYEE 193 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 + + +P + +Q + SAT S +V L P + L+ ++ + Sbjct 194 DMQSLAKAVP------RGVQTFLMSATFTS-EVDTLKGLFCRNPVVLKLEEKEDEGAGIS 246 Query 443 HVVVPVNPKTDRLWERLGKSHIRTDD------VHAKDNTRPGANSPEMWSEAIKILKGEY 496 VV + ++ ++ V D E + +L E Sbjct 247 QFVVRRCAEDEKFLLTYVIFKLQLVKGKCIIFVGDVDRCYRLKLFLEQFGIRSCVLNSEL 306 Query 497 AVRAIKE--HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 V + + ++ + +D + + +K Q S + D R Sbjct 307 PVNSRIHVVQEFNKGVYDIIIAVDDQEVLGELRKNSKKQPRKSDQCSRDSEY-DGAQTSR 365 Query 555 KQNL----------------ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 + + K+ D +RGID V V+N LP ++ Sbjct 366 NNDQYSSEDDAETQPSKRPKKSAKEKDYGI-------SRGIDFQNVACVLNFDLPTTSKS 418 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 Y HRIGR GRA + G+A+S V + + S ++ + Sbjct 419 YTHRIGRTGRAGKTGMALSFVIPSDQFGKHKPTSIPSAK------HDEAMLSKIIKRQDK 472 Query 659 LSEIEEHLNCTISQVEPDIKVPVDEFDG----KVTYGQKR-----AAGGGSYKGHVDILA 709 L + + + QV+ D V + R K H + Sbjct 473 LGREVKPYHFDMKQVDAFRYRMSDALRAVTRVAVQEARAREIRQELVKSEKLKRHFEENP 532 Query 710 PTVQELA-ALEKEAQTSFLHLGYLPNQLFRT 739 +++L E A HL ++P+ L T Sbjct 533 EELRQLRHDGELRAARVQAHLKHVPDYLMPT 563 Score = 107 bits (268), Expect = 6e-23, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 52/102 (51%), Gaps = 3/102 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + P + QA+ + + PT IQAE+IPL L G DVL A+TGSGKT A+ +PV+Q Sbjct 25 SFETLKLDPRLLQALTQQKFTKPTPIQAEAIPLALDGKDVLARAKTGSGKTAAYLLPVLQ 84 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + ++ K + + + +F+ Sbjct 85 SILQQKRNTPAHK---SISALILVPTRELAEQVHRTAISFSA 123 >sp|A5E726|DBP6_LODEL ATP-dependent RNA helicase DBP6 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP6 PE=3 SV=1 Length=663 Score = 209 bits (531), Expect = 7e-57, Method: Composition-based stats. Identities = 87/408 (21%), Positives = 170/408 (42%), Gaps = 45/408 (11%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + + + +P +A+++ P++ L Q + Q L + + ++ R++ Sbjct 293 ESLKDRVVPRV-RAIVLVPTKPLINQVRATMLQLA---LGTNLNIVSLKNDISIREESER 348 Query 336 L-ENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI--- 391 L E D+V+ TPGRL + ++ ++LS +R+LV+DEAD LL+Q + ++ + ++I Sbjct 349 LIELVPDVVISTPGRLVEHLAMDSISLSSLRYLVVDEADRLLNQSFQNWSQILISKIHLQ 408 Query 392 ---PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 ++Q + SATL + D KL+ H P + + + + + VP Sbjct 409 QVYDVANVWSLKVQKFIFSATLTT-DAGKLASLDFHNPRLLIVNDSQRLVNEL--FSVPA 465 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 +L + KS ++ + I + K+ Sbjct 466 MLSEYKLNFGVAKSSLKPLILAK---------------------------FLIAQEKLSD 498 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGP-DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 ++F ++ L ++ + + L +R R + L+ F + Sbjct 499 VLVFTKSNESSIRLCTLLQAIFDRICLQEKVKVGFMNLTNNRT-SLRSKILKDFTSQKIN 557 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TD+ ARG+D+ + V+N L + + YVHR+GR RA + G A +LV + E+ W Sbjct 558 ILVATDLIARGLDVTSIKDVVNYDLLNSSREYVHRVGRTARANQAGNAYNLVFGKGEEKW 617 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 + SS + + E + +E + L + E L QV Sbjct 618 FKTISSEVSRNNDVKDVEVNLKQLISDEDEKLYQ--EALQSLQDQVRK 663 Score = 62.5 bits (150), Expect = 9e-09, Method: Composition-based stats. Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 15/79 (19%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQ----AESIPLILGGG-------DVLMAAETGSGK 52 FSE + P + + +E + + +Q ++ +P I DVL+ A TGSGK Sbjct 224 FSEFPLSPFMHENLESLGFENAFAVQVGVLSKLLPEIQANKLRPDAFGDVLVNASTGSGK 283 Query 53 TGAFSIPVIQIVYETLKDQ 71 T A+SIP+I E+LKD+ Sbjct 284 TLAYSIPII----ESLKDR 298 >sp|Q6FUA6|DBP9_CANGA ATP-dependent RNA helicase DBP9 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP9 PE=3 SV=1 Length=595 Score = 206 bits (525), Expect = 1e-56, Method: Composition-based stats. Identities = 98/547 (18%), Positives = 190/547 (35%), Gaps = 51/547 (9%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 S N + L + +K ++++ + E+ K Sbjct 13 SVNFESFKLDARLLQAIKGSGFTHPTLIQSHAIPLALEEKR--DIIAKAATGSGKTLAYL 70 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 I Q + + ++T +I+ P+REL +Q +++ Y ++ L + Sbjct 71 IPVIQTILDYKKSRTNGDEPGTLGIIMVPTRELTQQVTAVLEKLIHYCS-KDIKVLNLAA 129 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDF 383 ++ ++L +I+VGTP ++ +++ + + ++FLV+DE D +L+ GY D Sbjct 130 DLSTSVLNTLLSENPEIIVGTPSKILNILERNTDTVGIDDLKFLVIDEVDLVLTFGYQDD 189 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT--- 440 ++++ +P K LQ + SATL S D++ L +K P + ++ D Sbjct 190 LDKIAEYLP----LKKNLQTFLMSATL-SDDIQSLKQKYCRSPAIIKFNDDEINKDKTKL 244 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 V + V + K + N ++ E I Sbjct 245 VQYYVRVGEFDKFLFCYVIFKLGLIKGKTLVFVNNIDRGYRLKLVLEQFGIKSCILNNEL 304 Query 501 IKEHKMDQAIIFCRT-------KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + F + D DN++++ +Q + + + + Sbjct 305 PANSRQHIVDQFNKNVYHLLIATDDADNIKEFDDEQKDDIQVEEKNDETNTVVAEESTNS 364 Query 554 RKQNLERFKKG---DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 + K D + + +RG+D V V+N LP + YVHR+GR RA Sbjct 365 TTGIKSKTKNNYKQDKEYGV-----SRGVDFKNVACVVNFDLPTTAKAYVHRVGRTARAG 419 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + G AIS V + + + E I + +L EI+ + Sbjct 420 KSGTAISFVVP-----LKEFGKHKPSMLPSAKKDEKILSRIIKQQSKLGLEIQPY----- 469 Query 671 SQVEPDIKVPVDEFDGKVTYG-QKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHL 729 FD K G + R G V + ++EL ++ H Sbjct 470 ------------SFDLKQVEGFRYRMEDGFRAVTQVAVREARIKELKEELLASEKLKRHF 517 Query 730 GYLPNQL 736 P +L Sbjct 518 EENPIEL 524 Score = 97.5 bits (241), Expect = 9e-20, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVIQ 62 F + + QA++ + PT IQ+ +IPL L D++ A TGSGKT A+ IPVIQ Sbjct 16 FESFKLDARLLQAIKGSGFTHPTLIQSHAIPLALEEKRDIIAKAATGSGKTLAYLIPVIQ 75 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 + + K + G + T+ + Sbjct 76 TILDYKKSRTNGDE-PGTLGIIMVPTRELTQQVTAVLEKL 114 >sp|Q4IJ56|DBP9_GIBZE ATP-dependent RNA helicase DBP9 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=DBP9 PE=3 SV=1 Length=615 Score = 207 bits (527), Expect = 1e-56, Method: Composition-based stats. Identities = 101/483 (21%), Positives = 180/483 (37%), Gaps = 34/483 (7%) Query 200 KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 + F DLGL + + Q +++ + ++ +A + Sbjct 37 EEETSF----VDLGLDPRLLQAIAQQKFAKPTLVQRKAIPLALNGQD--------VLAKA 84 Query 260 KAPDGYIVKSQHSGNAQVTQTKFLPNA--PKALIVEPSRELAEQTLNNIKQFKKYIDNPK 317 G + + + K + ALI+ P+RELA+Q I+QF + Sbjct 85 DCGSGKTAAYVLPLLSSILKRKATDSTAFTTALILVPTRELADQVSKAIEQFASFCA-KD 143 Query 318 LRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 + + V+++ Q ++L N DIV+ TP V++ L++ ++ L+LDEAD +LS Sbjct 144 ISTAKLTDKVSSKVQRALLSNSPDIVISTPSTAWQNVNSSALSIDKLTHLILDEADLVLS 203 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 GYS+ + + +P K +QV++ SATL S +V L PT +DLK +++ Sbjct 204 YGYSEDLENLSRSVP------KGVQVMMMSATL-SDEVDTLKGIFRRDPTLLDLKEKEAE 256 Query 438 PDTVHHVVVPVNPKTDRLWER-LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 + + V L + K + + +++ E I Sbjct 257 GEGITQFVAKCGEDEKFLLAYVIFKLKLIKGKCIIFVSDIDRCYRLKLFFEQFGIRSCIL 316 Query 497 AVRAIKEHKMDQAIIFCRTKID----CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 ++ F R D D + + Q + Sbjct 317 NSELPLNSRVHVVEEFNRHVYDIIIAADEKNEMLGDDEEPAETAEAQDDAKKSNEG-DDA 375 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 E + + K + +RG+D V VIN LP Y HRIGR RA + Sbjct 376 ETEAKRPKKKAKKSKGGDKEYGVSRGVDFKKVSAVINFDLPTTASAYTHRIGRTARAGQT 435 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQ 672 G+A+S V + ++ + C N E I + + E++ N + Q Sbjct 436 GMALSFVVPKD--LYRKHMPTSTPACEN---DEKIMARIIRQQAKRDKEVKP-YNFNMKQ 489 Query 673 VEP 675 V+P Sbjct 490 VDP 492 Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 46/103 (45%), Gaps = 4/103 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F ++G+ P + QA+ + + PT +Q ++IPL L G DVL A+ GSGKT A+ +P++ Sbjct 40 TSFVDLGLDPRLLQAIAQQKFAKPTLVQRKAIPLALNGQDVLAKADCGSGKTAAYVLPLL 99 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + T + FA Sbjct 100 SSILKRKATDSTA----FTTALILVPTRELADQVSKAIEQFAS 138 >sp|Q54TD7|DDX24_DICDI ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum OX=44689 GN=ddx24 PE=3 SV=1 Length=940 Score = 211 bits (537), Expect = 2e-56, Method: Composition-based stats. Identities = 101/456 (22%), Positives = 186/456 (41%), Gaps = 72/456 (16%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 +L++ P+RELA Q N+IK I + L+ + I+GG+A++ Q VL +IVV TP Sbjct 406 FSLVICPTRELAIQVTNHIKSI---ISHTNLKVISIVGGMASQRQQRVLSKRPEIVVATP 462 Query 348 GRLDDLVSTGK---LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 GRL +L++ G + L + L +DEAD ++ QG+ + + +P + + + + Sbjct 463 GRLWELITEGHQHLVELESLLCLGIDEADRMVEQGHFAELESILKTLPIHRTAMSKKERL 522 Query 405 VCSATLHSFD----VKKLSEK--------------------------------------- 421 T + V KL++K Sbjct 523 KKKETEEKRNKRRKVDKLNDKGEMIKGDQDDMDDQIPDEEMEELEQEEQNHLTTTHKRQT 582 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 + T V++ G+ P + + P + + + + + DV K T Sbjct 583 FVFSATLVNIPGDG-APTSQKKKYRKLTPIENLIEKVRFQRDYKLIDVTQKRLTAKNLLE 641 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 +++ + K Y ++ + + ++F + L P + Sbjct 642 TKIFCNLEE--KDMYLYYFVERYP-GRTLVFVNSIDCARRL---------IPIFNILEVP 689 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 LH + +R +NL+RF+ D LI TDVAARG+DI V +VI+ +P Q Y+H Sbjct 690 VFALHAQMQQKQRLKNLDRFRTLDNVVLIATDVAARGLDIPLVQHVIHYQVPRTTQLYIH 749 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSR--GKGCYNTRLKEDGGCTIWYNEMQLL 659 R GR R+++ G+++ LV ++ ++ + SS G + T ++ G + + Sbjct 750 RSGRTARSDQDGISVVLVTPKERPLYIKLDSSIEHDIGNFPTDIRYMEGVRDRIELAKEI 809 Query 660 SEI--------EEHLNCTISQVEPDIKVPVDEFDGK 687 ++ E E DI++ D F Sbjct 810 DKLSHQSLKDNREKSWFKKQAEEMDIELDGDFFGEN 845 Score = 95.6 bits (236), Expect = 7e-19, Method: Composition-based stats. Identities = 27/80 (34%), Positives = 48/80 (60%), Gaps = 1/80 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIP 59 M+ ++ + P I + + + + PT+IQ+ IP+ + G DV+ AA+TGSGKT AF IP Sbjct 293 MSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIGAAQTGSGKTLAFGIP 352 Query 60 VIQIVYETLKDQQEGKKGKT 79 ++Q + + L+ + + K Sbjct 353 MVQRILQHLRKHGQNVENKA 372 >sp|Q2GV49|SPB4_CHAGB ATP-dependent rRNA helicase SPB4 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=SPB4 PE=3 SV=1 Length=646 Score = 206 bits (525), Expect = 3e-56, Method: Composition-based stats. Identities = 92/382 (24%), Positives = 159/382 (42%), Gaps = 65/382 (17%) Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY-------------------IDNPKL 318 ++ + +A+I+ P+RELA Q N + F K+ P + Sbjct 80 SEDPAKRHHVQAIIISPTRELASQIYNVLVSFLKFHAPSAHLLPHAKGDEKRPATTEPVV 139 Query 319 RELLIIGGVAA--RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL--SQVRFLVLDEADG 374 L++GG D + L +I++GTPGRL +L+ST + S LV+DEAD Sbjct 140 VPQLLVGGTTKAAEDLSTFLRLSPNILIGTPGRLAELLSTPYVKAPSSSFEVLVMDEADR 199 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 LL G+S + R+ +P K+ + + SA+L S V++L + +P + ++ + Sbjct 200 LLDLGFSQELTRILGYLP------KQRRTGLFSASL-SEAVERLITVGLLYPHKITVRVK 252 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 +R + + T + + A + + Sbjct 253 S----------------------------LRDGGIVQERKTPMSLQMSYIVTPASQKIPA 284 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + E + ++I+F T + FS V LHG +P R Sbjct 285 LCQLLERLEPRPSRSIVFFSTCFAVKYFARVLH------GILPPGFSIVSLHGKLEPQVR 338 Query 555 KQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 ++N ERF L+ TD+AARG+DI V V+ P + + ++HR GR GRA R G Sbjct 339 EKNFERFVNAASPTVLLTTDIAARGLDIPQVDLVVQHDPPTDTKVFIHRCGRAGRAGRRG 398 Query 614 LAISLVATEKEKVWYHVCSSRG 635 LA+ ++ +E+ + + R Sbjct 399 LAVVMLQPGREEGYVQLLDVRQ 420 Score = 84.0 bits (206), Expect = 2e-15, Method: Composition-based stats. Identities = 25/94 (27%), Positives = 41/94 (44%), Gaps = 4/94 (4%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + P I + M + PT +Q + G DV++ A TGSGKT AF IPV++ + + Sbjct 22 LAPWILDYLSSMGFEQPTPVQKSCFDIFRGNKDVVVEAVTGSGKTLAFLIPVVERLLRS- 80 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 ++ K S + Y+ +F Sbjct 81 ---EDPAKRHHVQAIIISPTRELASQIYNVLVSF 111 >sp|Q0UP45|SPB4_PHANO ATP-dependent rRNA helicase SPB4 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=SPB4 PE=3 SV=1 Length=633 Score = 206 bits (524), Expect = 4e-56, Method: Composition-based stats. Identities = 102/552 (18%), Positives = 193/552 (35%), Gaps = 100/552 (18%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 I + +++A + + V + G + ++ Sbjct 22 IIDAVDAMGFVKTTPVQHAAIPMFMKNSD--------VVVEAVTGSGKTLAFLIPIVERL 73 Query 278 TQ--TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP------------------- 316 + + A+I+ P+RELA Q + K+ Sbjct 74 LREDAPTKKHHVGAIIISPTRELATQIHTVLSSLLKFHAPSAAMLEPDDEDTDMEDADTP 133 Query 317 ----------KLRELLIIGG--VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQV 364 K L++GG A+D + L+ +I++GTPGRL +L+ + ++ Q Sbjct 134 PKPTFPPGTLKAVPQLLLGGSVTPAQDLSAFLKKSPNILIGTPGRLLELLRSPHVHCPQS 193 Query 365 RF--LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKI 422 F LV+DEAD LL G+ + + ++ +++P K+ + + SA++ S V +L Sbjct 194 SFDALVMDEADRLLDLGFKEDLQKIISRLP------KQRRTGLFSASM-SEAVDQLIRVG 246 Query 423 MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 + P + +K + + R L S++ T H Sbjct 247 LRNPVRIAVKVKARATGE------DGKIEDKRTPASLQMSYLVTPPSHK----------- 289 Query 483 EMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 + + + + + ++I++ T D + + G + Sbjct 290 ---------IPAMKKILSSLQPQPQKSILYLSTCFSVDYFQHVLPEVLQG-------YDI 333 Query 543 VCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 V LHG R++N +F L+ TDVAARG+DI V V + P + + ++H Sbjct 334 VPLHGKHPDKVRRKNFNKFVDSVTPSILLTTDVAARGLDIPSVDLVFQLDPPSDPKTFIH 393 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R GR GRA R GLA++ + +E+ + R E ++ Sbjct 394 RCGRAGRAGRRGLAVTFLNPGREEDYIEFLQVRQTPISPLTTPE-------------ITV 440 Query 662 IEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKE 721 +E S++ ++ FD +Y H + +L E Sbjct 441 TDEDAKAVTSKIRKKVREDRALFDKAQRGFVSWVR---AYSKHTASSIFRIDDLDWTELG 497 Query 722 AQTSFLHLGYLP 733 L L +P Sbjct 498 NAWGLLTLPGMP 509 Score = 90.2 bits (222), Expect = 2e-17, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (47%), Gaps = 6/103 (6%) Query 2 AAFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 +FS + + I AV+ M ++ T +Q +IP+ + DV++ A TGSGKT AF IP Sbjct 9 RSFSALTPALSEWIIDAVDAMGFVKTTPVQHAAIPMFMKNSDVVVEAVTGSGKTLAFLIP 68 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +++ + ++ G I S + + S+ Sbjct 69 IVERLLREDAPTKKHHVGAIII----SPTRELATQIHTVLSSL 107 >sp|Q6CUI6|DBP9_KLULA ATP-dependent RNA helicase DBP9 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP9 PE=3 SV=1 Length=594 Score = 205 bits (521), Expect = 4e-56, Method: Composition-based stats. Identities = 103/584 (18%), Positives = 195/584 (33%), Gaps = 129/584 (22%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 S + L + +++ +++++ + E+ S Y Sbjct 14 SSSFDSFHLDSRLSQAIRSIGFKHPTLIQSSAIPLALQEKR---DIIAKASTGSGKTLAY 70 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII- 324 ++ + + A +I+ P+RELA+Q L +++ + +++ L + Sbjct 71 LIPVIQTILDHKKADQNDEGATLGVILVPTRELAQQVLEVVEKLIVFCSQ-EIKCLNLSS 129 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G V+ S+L +I++ TP +L DL+ +N+ +++FLV+DE D +L+ GY + + Sbjct 130 GNVSGNLLKSLLTENPEILIATPAKLVDLLDAQDVNIDRLKFLVIDEVDLVLTFGYQEDL 189 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 ++ ++P K LQ + SATL+ D++ L ++ P + L ++ Sbjct 190 TKISERLP----LRKSLQTFLMSATLND-DIQHLKQQFCRSPAILKLNDDE--------- 235 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 VN +L + K + + G Sbjct 236 ---VNKDQTKLIQYYVKVGEFDKFLLCYVIFKLGLIK----------------------- 269 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + +IF L+ Q G L+ + + R+ +E F K Sbjct 270 --GKTLIFVNNIDRGYRLKLVLEQFG---------IKSCILNSELPANSRQHIVEEFNKN 318 Query 565 DVRFLICTDVA------------------------------------------------- 575 + LI TD Sbjct 319 VYQLLIATDDTEYIKEEDEDLESEKTEDGLVEVVDDSTVTTKDNAKKQKKPKLNVEKDKE 378 Query 576 ---ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 +RG+D V V+N LP ++YVHRIGR RA + G++IS V KE Sbjct 379 YGVSRGVDFKNVACVLNFDLPTTAKSYVHRIGRTARAGKSGISISFVVPLKE-------- 430 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQ 692 + + + + + L + DIK +V + Sbjct 431 -----FGKHKPSMIKSAKKDEKILGRIIKQQAKLGFELQPYNFDIK--------QVEGFR 477 Query 693 KRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQL 736 R G V I ++EL ++ H P+ L Sbjct 478 YRMEDGFRAVTQVAIREARIKELKQELLASEKLKRHFEENPHDL 521 Score = 99.8 bits (247), Expect = 2e-20, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 3/102 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPV 60 ++F + ++QA+ + + PT IQ+ +IPL L D++ A TGSGKT A+ IPV Sbjct 15 SSFDSFHLDSRLSQAIRSIGFKHPTLIQSSAIPLALQEKRDIIAKASTGSGKTLAYLIPV 74 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 IQ + + K Q + T+ + + Sbjct 75 IQTILDHKKADQNDE--GATLGVILVPTRELAQQVLEVVEKL 114 >sp|Q6BZR4|DBP9_YARLI ATP-dependent RNA helicase DBP9 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=DBP9 PE=3 SV=1 Length=544 Score = 204 bits (518), Expect = 5e-56, Method: Composition-based stats. Identities = 118/517 (23%), Positives = 173/517 (33%), Gaps = 98/517 (19%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 K+ GL + + AC +K L N A + G Sbjct 8 DKSFDSFGLDDRLLSGL------AACDMKQPTLIQN-TTIPLALDKGVDITAKAVTGSGK 60 Query 266 IVKSQHSGNAQVTQTKFLPNAPK-ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 V + + + + ALIV P+REL EQ I + ++ P L+ L + Sbjct 61 TVAYLLPIFELMLRAEKEKRDIQTALIVVPTRELCEQVSKVITKLTQFC--PHLKSLNVT 118 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 + S+LE I+VGTP RL ++ S+V +LV+DEAD LLS GY + + Sbjct 119 QQLGDDVISSLLEEKPSIIVGTPSRLLKYAKE--MDCSKVGYLVIDEADLLLSYGYKEDL 176 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + +P K + SATL+ DL + TV V Sbjct 177 IELSEMLP------KTKHTFIMSATLNKES---------------DLMKQQFCRSTVASV 215 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + +L + K SE K L V + Sbjct 216 AVTAAEEERKLLQYYVK-----------------------CSERDKFL--LAYVMFKLQL 250 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 + I+F C L + Q G L+ + R +E+F KG Sbjct 251 VKGKTIVFVNEIDRCYRLRLFLEQFG---------IKACVLNSELPIASRLHIVEQFNKG 301 Query 565 DVRFLICTDVA-------------------------ARGIDIHGVPYVINVTLPDEKQNY 599 LICTD A RG+D V +V+N LP + Y Sbjct 302 VFNLLICTDEANKLAEASKSASKQTKEVSRAHEYSSTRGLDFMNVAFVLNFDLPLSSRAY 361 Query 600 VHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 VHR+GR RA + G A+S V + + E I N+ Sbjct 362 VHRVGRTARANKAGTALSFVVPAD-----QWGKDKVAKLDTAKRDEKVLKKIIKNQESQN 416 Query 660 SEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAA 696 EI+ + + QVE D F T G + A Sbjct 417 MEIKP-YSFDMKQVEGFRYRMDDAFRAVTTVGVREAR 452 Score = 87.5 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 36/174 (21%), Positives = 66/174 (38%), Gaps = 18/174 (10%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPV 60 +F G+ + + D PT IQ +IPL L G D+ A TGSGKT A+ +P+ Sbjct 9 KSFDSFGLDDRLLSGLAACDMKQPTLIQNTTIPLALDKGVDITAKAVTGSGKTVAYLLPI 68 Query 61 IQIVYETLKDQQEGKKGKTTIKT-------GASVLNKWQMNPYDRGSAFAIGSDGLCCQS 113 +++ K++++ + + T + Q P+ + S Sbjct 69 FELMLRAEKEKRDIQTALIVVPTRELCEQVSKVITKLTQFCPHLKSLNVTQQLGDDVISS 128 Query 114 REVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGF 167 ++ T + K+ E+ C G + +A L L +G+ Sbjct 129 LLEEKPSIIVGTPSRLL-KYAKEMDCSKVGYLVI----DEADLLL-----SYGY 172 >sp|Q6BLM5|DBP9_DEBHA ATP-dependent RNA helicase DBP9 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=DBP9 PE=3 SV=1 Length=586 Score = 204 bits (520), Expect = 5e-56, Method: Composition-based stats. Identities = 101/597 (17%), Positives = 201/597 (34%), Gaps = 135/597 (23%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 + GL + + +++++ + E K +A + G Sbjct 24 ESFGLDARLLQAIDQLGFENPTLIQSSAIPLAIEE-------KRDIIAKASTGSGKTAAY 76 Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + Q + K++I+ P+REL+ Q +++ + N K+R + I ++ Sbjct 77 SIPIIQNLLQDESTEREIKSIILVPTRELSNQVSQFLEKLLIFC-NSKIRLINISSNLSD 135 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGK----LNLSQVRFLVLDEADGLLSQGYSDFIN 385 + S+L N +I+V TP +L ++ +NLS V+ L +DE D +LS GY + + Sbjct 136 QVINSLLINKPEIIVSTPAKLIQILEKNVNSNLINLSTVKNLTIDEVDLVLSYGYLEDLQ 195 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 ++ + +P K LQ + SAT++ D+ + K P + L EDS + + Sbjct 196 KLESYLP----IKKNLQTFLMSATIND-DLNDIKSKFCSRPAILKLNDEDSNQNNLVQYY 250 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 L + + + IK Sbjct 251 AKTTEFDKFLLTYV-----------------------------------IFKLNLIK--- 272 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + ++F L+ + Q G C L+ + + R +E++ K Sbjct 273 -GKTLVFVNNIDRGYRLKLFLEQFG---------VRCCILNSELPINSRLNIVEQYNKNV 322 Query 566 VRFLICTDVA---------------------------------------------ARGID 580 LI TD +RG+D Sbjct 323 YNLLIATDETNDFTIQEDEKDEGEEIEENKNEENDGKTSKNTKKPNQKKDKEYGVSRGVD 382 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT----------------EKE 624 V V+N LP ++Y+HR+GR RA + G+A+S V + E Sbjct 383 FRNVACVLNFDLPTSSKSYIHRVGRTARAGKSGMALSFVLPLNEFGKHKTASLSTAKKDE 442 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE-PDIKVPVDE 683 KV + + + + + + + + + ++K + Sbjct 443 KVLRRIVRQQSNNGFEIKPYQFDMKQVEGFRYRAEDAFRAVTQSAVREARIKELKNELVN 502 Query 684 FDGKVTYGQKRAAGGGSYKGHVDILAPT-----VQELAA--LEKEAQTSFLHLGYLP 733 D + ++ S + H L PT ++ + L + A+ +G++P Sbjct 503 SDKLKRFFEENPQDLASLR-HDKELHPTRVQTHLKRVPEYLLPESARADHKKIGFVP 558 Score = 97.1 bits (240), Expect = 1e-19, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 53/102 (52%), Gaps = 4/102 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPV 60 + G+ + QA++++ + PT IQ+ +IPL + D++ A TGSGKT A+SIP+ Sbjct 21 TTWESFGLDARLLQAIDQLGFENPTLIQSSAIPLAIEEKRDIIAKASTGSGKTAAYSIPI 80 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 IQ + + D+ ++ K+ I L+ ++ F Sbjct 81 IQNLLQ---DESTEREIKSIILVPTRELSNQVSQFLEKLLIF 119 >sp|A1CL59|SPB4_ASPCL ATP-dependent rRNA helicase spb4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=spb4 PE=3 SV=1 Length=639 Score = 206 bits (523), Expect = 6e-56, Method: Composition-based stats. Identities = 87/402 (22%), Positives = 160/402 (40%), Gaps = 73/402 (18%) Query 262 PDGYIVKSQHSGNAQVTQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP--- 316 G + ++ + + + A+I+ P+RELA Q + ++ + Sbjct 61 GSGKTLSFLLPIVEKLLRLEEPIKKHHIGAIIISPTRELASQIHSVMQSLLAFHPPSAAA 120 Query 317 -------------------KLRELLIIGG--VAARDQLSVLENGVDIVVGTPGRLDDLVS 355 K+ L++GG A D L+ +++V TPGRL +L+S Sbjct 121 MTPLDDDDAPRQKFPSSTLKVVPQLLLGGSTTPAEDLSRFLKLSPNVLVSTPGRLLELLS 180 Query 356 TGKLNL--SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 + ++ S LVLDEAD LL G+ + + + ++P K+ + + SA++ S Sbjct 181 SPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLP------KQRRTGLFSASV-SE 233 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 V ++ + P + +K + + R L +++ T +H Sbjct 234 AVDQIVRVGLRNPVKIMVKVKGT-----------SGVDDKRTPASLQMTYLSTPPLHKFA 282 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 + +S + ++I F T D L P Sbjct 283 ALKNILSSV--------------------QPTPQKSIFFVSTCSGVDYLSAIL------P 316 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTL 592 G F + LHG + + R++N RF L+ TDVA+RG+DI V V+ + Sbjct 317 LLLGDDFLLIPLHGKHQANVRQKNFNRFLSSHSPAILLTTDVASRGLDIPSVDLVVQIDP 376 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 P + + ++HR GR GRA R GL++ ++ +E+ + R Sbjct 377 PSDPKTFIHRCGRAGRAGRRGLSVVMLHPGREEDYVSFLDVR 418 Score = 91.3 bits (225), Expect = 1e-17, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 + + +A+ M + T +QA +IPL + DV++ A TGSGKT +F +P+++ + Sbjct 20 PLSEWVLEAMSSMGFARMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLLPIVEKLLRL 79 Query 68 LKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +E K S + + + Sbjct 80 ----EEPIKKHHIGAIIISPTRELASQIHSVMQSL 110 >sp|Q4X0C2|DBP9_ASPFU ATP-dependent RNA helicase dbp9 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dbp9 PE=3 SV=1 Length=649 Score = 206 bits (523), Expect = 6e-56, Method: Composition-based stats. Identities = 106/556 (19%), Positives = 191/556 (34%), Gaps = 53/556 (10%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + L L + + + +++ + +A +K G Sbjct 59 FESLNLDPRLRQALIKEQFTKPTPVQSKAIPLAL--------EGKDILARAKTGSGKTAA 110 Query 269 SQHSGNAQVTQTKFLPN---APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + Q K A LI+ P+RELAEQ + I +F + +R + + Sbjct 111 YVLPILQTILQKKAADPSLKATTGLILVPTRELAEQVQSVIIKFSAFC-GKDVRSVNLTQ 169 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 V+ Q ++L + D++V TP R+ + T L+L + LV+DEAD +LS GY + IN Sbjct 170 KVSDAVQRTMLADYPDLIVSTPARVIANLGTSALSLENLTHLVIDEADLVLSYGYDEDIN 229 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IP + +Q + SATL S +V L P + L+ ++ + V Sbjct 230 ALAKAIP------RGVQTFLMSATLTS-EVDTLKGLFCRSPVILKLEDKEDEGAGISQFV 282 Query 446 VPVNPKTDRLWERLGKSHIRTD-----DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 V L + V D E + +L E + + Sbjct 283 VRCAEDEKFLLTYVIFKLQLIKGKVIIFVGDIDRCYRLKLFLEQFGIKSCVLNSELPINS 342 Query 501 IKE--HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK--- 555 + ++ + D + + G + + + Sbjct 343 RIHVVQEFNKGVYDIIIAADEQEVMGLRTSSKKSKEATDGDDEAKDKMGSSEDEDNEPEQ 402 Query 556 ----QNLERFKKGDVRFLICTDV-AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 E+ +K + D +RGID V V+N LP ++Y HRIGR GRA Sbjct 403 SGKSARPEKRRKTSGK---AKDYGISRGIDFQNVACVLNFDLPTTSKSYTHRIGRTGRAG 459 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + G+A+S V + + E I + +L E++ + + Sbjct 460 KAGMALSFVVPAD-----KFGKHKPTSFPTAKHDESVLAKIVKKQAKLGHEVKP-YHFEM 513 Query 671 SQVEPDIKVPVDEFD---------GKVTYGQKRAAGGGSYKGHVDILAPTVQELA-ALEK 720 QV+ D + ++ K H + +++L E Sbjct 514 KQVDAFRYRMTDALRAVTRLAIQEARAREIRQELVKSEKLKRHFEENPEELKQLRHDGEL 573 Query 721 EAQTSFLHLGYLPNQL 736 A HL ++P+ L Sbjct 574 RAARIQPHLKHIPDYL 589 Score = 102 bits (254), Expect = 3e-21, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 47/103 (46%), Gaps = 3/103 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P + QA+ + + PT +Q+++IPL L G D+L A+TGSGKT A+ +P++ Sbjct 57 TDFESLNLDPRLRQALIKEQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPIL 116 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + + K T + F+ Sbjct 117 QTILQKKAADPSLK---ATTGLILVPTRELAEQVQSVIIKFSA 156 >sp|A1DHV3|DBP9_NEOFI ATP-dependent RNA helicase dbp9 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dbp9 PE=3 SV=1 Length=619 Score = 204 bits (520), Expect = 1e-55, Method: Composition-based stats. Identities = 106/556 (19%), Positives = 192/556 (35%), Gaps = 53/556 (10%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + L L + + + +++ + +A +K G Sbjct 29 FESLNLDPRLRQALIREQFTKPTPVQSKAIPLAL--------EGKDILARAKTGSGKTAA 80 Query 269 SQHSGNAQVTQTKFLPN---APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + Q K A L++ P+RELAEQ + I +F + +R + + Sbjct 81 YVLPILQTILQKKAADPSLKATTGLVLVPTRELAEQVQSVIIKFSAFC-GKDVRSVNLTQ 139 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 V+ Q ++L + D++V TP R+ + T L+L + LV+DEAD +LS GY + IN Sbjct 140 KVSDAVQRTMLADYPDLIVSTPARVIANLGTSALSLEHLTHLVIDEADLVLSYGYDEDIN 199 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IP + +Q + SATL S +V L P + L+ ++ + V Sbjct 200 ALAKAIP------RGVQTFLMSATLTS-EVDTLKGLFCRSPVILKLEDKEDEGAGISQFV 252 Query 446 VPVNPKTDRLWERLGKSHIRTD-----DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 V L + V D E + +L E + + Sbjct 253 VRCAEDEKFLLTYVIFKLQLIKGKVIIFVGDIDRCYRLKLFLEQFGIKSCVLNSELPINS 312 Query 501 IKE--HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK--- 555 + ++ + D + + G + + + Sbjct 313 RIHVVQEFNKGVYDIIIAADEQEVMGSRTSSKKSKEATDGDDEAKDKMGSSEDEDNEPEQ 372 Query 556 ----QNLERFKKGDVRFLICTDV-AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 E+ +K + D +RGID V V+N LP ++Y HRIGR GRA Sbjct 373 SGKSARPEKRRKTSGK---AKDYGISRGIDFQNVACVLNFDLPTTSKSYTHRIGRTGRAG 429 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + G+A+S V E + + E I + +L E++ + + Sbjct 430 KAGMALSFVVPADE-----FGKHKPTSFPTAKHDESVLAKIVKKQAKLGHEVKP-YHFEM 483 Query 671 SQVEPDIKVPVDEFD---------GKVTYGQKRAAGGGSYKGHVDILAPTVQELA-ALEK 720 QV+ D + ++ K H + +++L E Sbjct 484 KQVDAFRYRMTDALRAVTRLAIQEARAREIRQELVKSEKLKRHFEENPEELKQLRHDGEL 543 Query 721 EAQTSFLHLGYLPNQL 736 A HL ++P+ L Sbjct 544 RAARIQPHLKHIPDYL 559 Score = 101 bits (252), Expect = 5e-21, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 46/103 (45%), Gaps = 3/103 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P + QA+ + PT +Q+++IPL L G D+L A+TGSGKT A+ +P++ Sbjct 27 TDFESLNLDPRLRQALIREQFTKPTPVQSKAIPLALEGKDILARAKTGSGKTAAYVLPIL 86 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + + K T + F+ Sbjct 87 QTILQKKAADPSLK---ATTGLVLVPTRELAEQVQSVIIKFSA 126 >sp|Q4R4T6|DDX28_MACFA Probable ATP-dependent RNA helicase DDX28 OS=Macaca fascicularis OX=9541 GN=DDX28 PE=2 SV=1 Length=546 Score = 203 bits (516), Expect = 1e-55, Method: Composition-based stats. Identities = 99/439 (23%), Positives = 165/439 (38%), Gaps = 64/439 (15%) Query 208 NGKDLGLAFEIPPHMKNQA---LFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 N DLGL + ++ A + P V N + G LS Sbjct 127 NFADLGLEPRVLHALQEVAPEVVQPTTVQSNTIPQLLRGRHVLCAAETGSGKTLS----- 181 Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII 324 Y++ Q + AP+ L++ PSRELA+Q + + + L + Sbjct 182 YLLPLFQRLMVQPSLDSLRIPAPRGLVLVPSRELAQQVQAVAQPLGR---SLGLLVRDLE 238 Query 325 GGVAARDQLSVLENGV--DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG L D++V TPG L + + ++L Q+ FLVLDEAD LL + + + Sbjct 239 GGHGMCRIRMQLARQPSADVLVATPGALWKALKSRLISLEQLSFLVLDEADTLLDESFLE 298 Query 383 FINRMHN--QIPQVTSDGKRL-----QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 ++ + I +D + Q+++ AT V +L +K+ Sbjct 299 LVDCILEKSHIADGPADLEDRFNPKAQLVLVGATFP-EGVGQLLDKV------------- 344 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + PD V + + + + ++ +R + +E + ILK Sbjct 345 ASPDAVTTI---TSSNLHCIMPHVKQTFLR-------------LKGADKVAELVHILKHH 388 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 RA + ++FC + + L H+ + L G R Sbjct 389 N--RAERTGPSGTVLVFCNSSSTVNWLGYIL---------DDHKIQHLRLQGQMPALMRA 437 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM--G 613 + F+K L+CTD+A+RG+D GV V+N P Q+Y+HR GRVGR G Sbjct 438 GIFQSFQKSSRDILLCTDIASRGLDSTGVELVVNYDFPPTLQDYIHRAGRVGRVGSEVPG 497 Query 614 LAISLVA-TEKEKVWYHVC 631 IS V + + Sbjct 498 TVISFVTHPWDVSLVQKIE 516 Score = 80.6 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 10/155 (6%) Query 4 FSEMGVMPEIAQAVEEM--DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F+++G+ P + A++E+ + + PT +Q+ +IP +L G VL AAETGSGKT ++ +P+ Sbjct 128 FADLGLEPRVLHALQEVAPEVVQPTTVQSNTIPQLLRGRHVLCAAETGSGKTLSYLLPLF 187 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 Q + ++ + + + L R+++ HG Sbjct 188 QRLM--VQPSLDSLRIPAPRGLVLVPSRELAQQVQAVAQPLGRS---LGLLVRDLEGGHG 242 Query 122 CRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASL 156 + + + +V G W +++ L Sbjct 243 MCRIRMQLARQPSADVLVATPGAL---WKALKSRL 274 >sp|A1D699|SPB4_NEOFI ATP-dependent rRNA helicase spb4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=spb4 PE=3 SV=1 Length=640 Score = 205 bits (521), Expect = 1e-55, Method: Composition-based stats. Identities = 92/402 (23%), Positives = 159/402 (40%), Gaps = 73/402 (18%) Query 262 PDGYIVKSQHSGNAQVTQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP--- 316 G + ++ + + + A+I+ P+RELA Q N + + Sbjct 61 GSGKTLSFLIPVVEKLLRLEEPIKKHHIGAIIISPTRELASQIYNVLSSLLAFHPPSAAA 120 Query 317 -------------------KLRELLIIGG--VAARDQLSVLENGVDIVVGTPGRLDDLVS 355 K+ L++GG A D + L+ +++V TPGRL +L+S Sbjct 121 INPSEDDDAPRPKFPSSTLKVVPQLLLGGSTTPAEDLSTFLKRSPNVLVSTPGRLLELLS 180 Query 356 TGKLNL--SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 + ++ S LVLDEAD LL G+ + + + ++P K+ + + SA++ S Sbjct 181 SPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLP------KQRRTGLFSASV-SE 233 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 V ++ + P V +K + R L +++ T H Sbjct 234 AVDQIVRVGLRNPVKVMVKVKGG-----------SGVDDKRTPASLQMTYLTTPPSHKFA 282 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 + +S + + I F T D L P Sbjct 283 ALKRILSSV--------------------QPTPLKTIFFVSTCSGVDYLSAIL------P 316 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTL 592 G F + LHG + + R++N RF D L+ TDVAARG+DI V V+ + Sbjct 317 LLLGDDFLLIPLHGKHQANVRQKNFNRFINSHDPAILLTTDVAARGLDIPSVDLVVQIDP 376 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 P + ++++HR GR GRA R GL++ L+ +E+ + R Sbjct 377 PSDPKSFIHRCGRAGRAGRRGLSVVLLHPGREEDYVSFLEVR 418 Score = 93.7 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 26/94 (28%), Positives = 44/94 (47%), Gaps = 4/94 (4%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + + +A+ M + T +QA +IPL + DV++ A TGSGKT +F IPV++ + Sbjct 21 LSEWVLEAMSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRL- 79 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +E K S + Y+ S+ Sbjct 80 ---EEPIKKHHIGAIIISPTRELASQIYNVLSSL 110 >sp|Q4WYJ7|SPB4_ASPFU ATP-dependent rRNA helicase spb4 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=spb4 PE=3 SV=2 Length=640 Score = 205 bits (521), Expect = 1e-55, Method: Composition-based stats. Identities = 92/402 (23%), Positives = 159/402 (40%), Gaps = 73/402 (18%) Query 262 PDGYIVKSQHSGNAQVTQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP--- 316 G + ++ + + + A+I+ P+RELA Q N + + Sbjct 61 GSGKTLSFLIPVVEKLLRLEEPIKKHHVGAIIISPTRELASQIYNVLSSLLAFHPPSAAA 120 Query 317 -------------------KLRELLIIGG--VAARDQLSVLENGVDIVVGTPGRLDDLVS 355 K+ L++GG A D + L+ +++V TPGRL +L+S Sbjct 121 INPSEDDDAPRPKFPSSTLKVVPQLLLGGSTTPAEDLSTFLKRSPNVLVSTPGRLLELLS 180 Query 356 TGKLNL--SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 + ++ S LVLDEAD LL G+ + + + ++P K+ + + SA++ S Sbjct 181 SPHVHCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLP------KQRRTGLFSASV-SE 233 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 V ++ + P V +K + R L +++ T H Sbjct 234 AVDQIVRVGLRNPVKVMVKVKGG-----------SGVDDKRTPASLQMTYLTTPPSHKFA 282 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 + +S + + I F T D L P Sbjct 283 ALKRIVSSV--------------------QPTPLKTIFFVSTCSGVDYLSAIL------P 316 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTL 592 G F + LHG + + R++N RF D L+ TDVAARG+DI V V+ + Sbjct 317 LLLGDDFLLIPLHGKHQANVRQKNFNRFINSHDPAILLTTDVAARGLDIPSVDLVVQIDP 376 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 P + ++++HR GR GRA R GL++ L+ +E+ + R Sbjct 377 PSDPKSFIHRCGRAGRAGRRGLSVVLLHPGREEDYVSFLEVR 418 Score = 93.7 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 26/94 (28%), Positives = 44/94 (47%), Gaps = 4/94 (4%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + + +A+ M + T +QA +IPL + DV++ A TGSGKT +F IPV++ + Sbjct 21 LSEWVLEAMSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRL- 79 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +E K S + Y+ S+ Sbjct 80 ---EEPIKKHHVGAIIISPTRELASQIYNVLSSL 110 >sp|P0CR05|ROK1_CRYNB ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=ROK1 PE=3 SV=1 Length=620 Score = 204 bits (518), Expect = 2e-55, Method: Composition-based stats. Identities = 89/439 (20%), Positives = 161/439 (37%), Gaps = 108/439 (25%) Query 255 FVALSKAPDG------YIVKS--QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 L AP G Y++ + + A+ + +AL+V P+ +LA Q I Sbjct 161 RDTLCVAPTGSGKTLSYVLPTIVKLREPARKLKGTEEGKGVRALVVVPTHDLAVQIQGVI 220 Query 307 K--QFKKYIDNPKLREL------------LIIGGVAARDQLSVLEN-------------- 338 K ++ + L + + G ++ E+ Sbjct 221 KAVTMGRHWRSMVLTKATEKAVWESAPGEAVKTGEDGDSEMKDGEDSGDEEEDEDDNEST 280 Query 339 -----------------GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 G+D++V TP RL L+ + +++L++ ++++LDE+D LLS + Sbjct 281 GSVDEFAPKVSGNPEGLGIDVLVATPERLHHLIDSRRISLARTKYVILDESDRLLSSDFL 340 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDT 440 + + + +Q SAT+ + L++K + + G +DS T Sbjct 341 PQVEPILSAC-----SNPAVQKCFLSATMP-AGAESLAKKWLKDGGVRVVVGVKDSAVTT 394 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 V ++ ++ +L A N P Sbjct 395 VDQSLLYTGSESGKLL--------------ALRNLISSGQLPY----------------- 423 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 ++IF ++ + L + + G +HG + +R + ++ Sbjct 424 -------PSLIFVQSIDRAEELYKTLVLDG---------IKVDAVHGGKAKTKRDEAIKD 467 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G V L+ T+V ARG+D GV VIN P +Y+HRIGR GRA R G AI+ Sbjct 468 FRVGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRIGRTGRAGRPGKAITFFN 527 Query 621 TEKEKVWYHVCSS-RGKGC 638 E + + R GC Sbjct 528 IEDGPYLRTIANVLRSSGC 546 Score = 60.5 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 21/118 (18%), Positives = 40/118 (34%), Gaps = 3/118 (3%) Query 12 EIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQ 71 + A+ + +Q +L D L A TGSGKT ++ +P I + E + Sbjct 133 PLLSALSRANIHSLWGVQCAVGGCLLEDRDTLCVAPTGSGKTLSYVLPTIVKLREPARKL 192 Query 72 QEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD---GLCCQSREVKEWHGCRATK 126 + ++GK + + A +G + ++ E W Sbjct 193 KGTEEGKGVRALVVVPTHDLAVQIQGVIKAVTMGRHWRSMVLTKATEKAVWESAPGEA 250 >sp|A7TPC9|DBP9_VANPO ATP-dependent RNA helicase DBP9 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=DBP9 PE=3 SV=2 Length=597 Score = 203 bits (516), Expect = 2e-55, Method: Composition-based stats. Identities = 109/591 (18%), Positives = 202/591 (34%), Gaps = 120/591 (20%) Query 200 KGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 + F + L L + +K ++++ + E+ Sbjct 14 DDSISF----ESLQLDTRLLQAIKRNGFKNPTLIQSHAIPLALQEKR---DIIAKAATGC 66 Query 260 KAPDGYIVKSQHSGNAQVTQTKFLPNAPK---ALIVEPSRELAEQTLNNIKQFKKYIDNP 316 Y++ + + +I+ P+RELA+Q + + + Y N Sbjct 67 GKTLAYLIPVIQTILDYKKTNTDKIDGTSNTLGIILVPTRELAQQVNDVLDKMILYCSN- 125 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG--KLNLSQVRFLVLDEADG 374 +R L I + + S+L +I++ TPG+L L+ T ++L +++FLV+DE D Sbjct 126 DIRSLNISSDMPSSVLTSLLLEKPEIIIATPGKLMTLLDTNVESVSLEELKFLVIDEVDL 185 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 +L+ GY + ++++ +P K LQ + SATL+ D+++L ++ P + + Sbjct 186 VLTFGYKEDLSKIAEYLP----LKKNLQTFLMSATLND-DIQELKKEFCRAPAILKFNDD 240 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + D +L + +++T SE K L Sbjct 241 EISKDK----------------NKLIQYYVKT-------------------SEFDKFLLC 265 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 Y + + K + +IF L+ Q G L+ + + R Sbjct 266 -YVIFKLGLIK-GKTLIFVNNIDRGYRLKLVLEQFG---------IKSCILNSELPANSR 314 Query 555 KQNLERFKKGDVRFLICTDVA--------------------------------------- 575 + +++F K LI TD Sbjct 315 QHIVDQFNKNVYHLLIATDDTEYIKEEDEENDDEIETNSEEQDKVEDSNDTKDKKGKKAS 374 Query 576 ----------ARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +RG+D V V+N LP ++YVHRIGR RA + G AIS V Sbjct 375 KIKKDKEFGVSRGVDFQNVACVLNFDLPTTAKSYVHRIGRTARAGKTGTAISFVVP---- 430 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + +T+ E I + +L E++ + Q+E D F Sbjct 431 -LKEFGKHKPSMYQSTKRDEKILSRIIKQQSKLGLELQP-YSFDTKQIEGFRYRMEDGFR 488 Query 686 GKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQL 736 VT R A K + + +E Q+ P+++ Sbjct 489 -AVTQVAIREARVKELKDELLASEKLKRHFEENPQELQSLRHDKELHPSRV 538 Score = 100 bits (248), Expect = 1e-20, Method: Composition-based stats. Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 2/102 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPVI 61 +F + + + QA++ + PT IQ+ +IPL L D++ A TG GKT A+ IPVI Sbjct 18 SFESLQLDTRLLQAIKRNGFKNPTLIQSHAIPLALQEKRDIIAKAATGCGKTLAYLIPVI 77 Query 62 QIVYETLKDQQEGKKGKT-TIKTGASVLNKWQMNPYDRGSAF 102 Q + + K + G + T+ + D Sbjct 78 QTILDYKKTNTDKIDGTSNTLGIILVPTRELAQQVNDVLDKM 119 >sp|P0CR04|ROK1_CRYNJ ATP-dependent RNA helicase ROK1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=ROK1 PE=3 SV=1 Length=620 Score = 203 bits (516), Expect = 4e-55, Method: Composition-based stats. Identities = 89/439 (20%), Positives = 161/439 (37%), Gaps = 108/439 (25%) Query 255 FVALSKAPDG------YIVKS--QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 L AP G Y++ + + A+ + +AL+V P+ +LA Q I Sbjct 161 RDTLCVAPTGSGKTLSYVLPTIVKLREPARKLKGTEEGKGVRALVVVPTHDLAVQIQGVI 220 Query 307 K--QFKKYIDNPKLREL------------LIIGGVAARDQLSVLEN-------------- 338 K ++ + L + + G ++ E+ Sbjct 221 KAVTMGRHWRSMVLTKATEKAVWESAPGEAVKTGEDGDSEIKDGEDSGDEEEDEDDNGST 280 Query 339 -----------------GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 G+D++V TP RL L+ + +++L++ ++++LDE+D LLS + Sbjct 281 GSVDEFAPKVSGNPEGLGIDMLVATPERLHHLIDSRRISLARTKYVILDESDRLLSSDFL 340 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG-EDSVPDT 440 + + + +Q SAT+ + L++K + + G +DS T Sbjct 341 PQVEPILSAC-----SNPAVQKCFLSATMP-AGAESLAKKWLKDGGVRVVVGVKDSAVTT 394 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 V ++ ++ +L A N P Sbjct 395 VDQSLLYTGSESGKLL--------------ALRNLISSGQLPY----------------- 423 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 ++IF ++ + L + + G +HG + +R + ++ Sbjct 424 -------PSLIFVQSIDRAEELYKTLVLDG---------IKVDAVHGGKAKTKRDEAIKD 467 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G V L+ T+V ARG+D GV VIN P +Y+HRIGR GRA R G AI+ Sbjct 468 FRVGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRIGRTGRAGRPGKAITFFN 527 Query 621 TEKEKVWYHVCSS-RGKGC 638 E + + R GC Sbjct 528 IEDGPYLRTIANVLRSSGC 546 Score = 60.5 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 21/118 (18%), Positives = 40/118 (34%), Gaps = 3/118 (3%) Query 12 EIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQ 71 + A+ + +Q +L D L A TGSGKT ++ +P I + E + Sbjct 133 PLLSALSRANIHSLWGVQCAVGGCLLEDRDTLCVAPTGSGKTLSYVLPTIVKLREPARKL 192 Query 72 QEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD---GLCCQSREVKEWHGCRATK 126 + ++GK + + A +G + ++ E W Sbjct 193 KGTEEGKGVRALVVVPTHDLAVQIQGVIKAVTMGRHWRSMVLTKATEKAVWESAPGEA 250 >sp|O60080|DBP9_SCHPO ATP-dependent RNA helicase dbp9 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp9 PE=3 SV=1 Length=595 Score = 202 bits (514), Expect = 4e-55, Method: Composition-based stats. Identities = 88/446 (20%), Positives = 165/446 (37%), Gaps = 52/446 (12%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K D L + + +++ + VA ++ G Sbjct 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLAL--------EGKDLVAQARTGSGKT 65 Query 267 VKSQHSGNAQV---TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 + Q AL++ P+RELA+Q N +++ + +R + + Sbjct 66 AAYLIPILELLLKQKQIDENQRGIFALLLVPTRELAQQVYNVLEKLTAFCSKH-IRFINV 124 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 + Q +L + DIV+ TP R V++G L L +++FLV+DEAD +LS GY++ Sbjct 125 ATNSSDTVQRPLLLDLPDIVIATPSRCVVHVASGVLPLDKLKFLVIDEADLMLSFGYNED 184 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 + + +P+ T Q + SATL S ++ L + + P + +K +++ + Sbjct 185 MKTLSRSLPRGT------QSFLMSATL-SKNIASLQKLVCRNPFILAVKDKEASGKLTQY 237 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI--------LKGE 495 VV L L K + + N +++ E + L Sbjct 238 VVKCSEQDKFLLAYILLKLRLIKGKILIFVNEINRCYRLKLFLEQFGLKSLVLNSELPVN 297 Query 496 YAVRAIKEHKMD--QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + ++++ Q II E + + + + D+ + Sbjct 298 SRLHILEQYNKGLYQIIIATD--------ESGMMGEIEELENNVDFVEEEVISTDQPTLD 349 Query 554 RKQNLERFKKGDVRFLICTDV---------------AARGIDIHGVPYVINVTLPDEKQN 598 + ++ E D L ARG+D V V+N +P ++ Sbjct 350 KMKDQENADVNDESILAAAKDKSKKKKRVKQDKEYGVARGLDFENVACVLNFDMPSNTKS 409 Query 599 YVHRIGRVGRAERMGLAISLVATEKE 624 Y+HRIGR RA + G A+S V + E Sbjct 410 YIHRIGRTARAGKPGTAMSFVVPKSE 435 Score = 107 bits (267), Expect = 6e-23, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 3/103 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FS+ + P + +A+ + ++ PT +Q+E+IPL L G D++ A TGSGKT A+ IP++ Sbjct 14 KTFSDFNLDPRLQRAIHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPIL 73 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 +++ + K E ++G + Y+ Sbjct 74 ELLLKQ-KQIDENQRG--IFALLLVPTRELAQQVYNVLEKLTA 113 >sp|P0CQ94|DBP7_CRYNJ ATP-dependent RNA helicase DBP7 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP7 PE=3 SV=1 Length=948 Score = 206 bits (525), Expect = 7e-55, Method: Composition-based stats. Identities = 92/526 (17%), Positives = 166/526 (32%), Gaps = 116/526 (22%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV- 277 P + P + G+E K P + ++ G + + Sbjct 223 KPTGIQRNCLPYMLSSPLNPDKKAGDEGPKEEPLRDVLIQAQTGSGKTLSYLLPIVQTLL 282 Query 278 --TQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDN-----------------P 316 ++ ++ A+I+ P+RELA+Q ++Q Sbjct 283 PLSRLSYIDRSIGTLAIILAPTRELAQQISKVLEQLLHMSFAASKEGSDDEDEDDRPFTR 342 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGL 375 L L+ GG + + L GV I+V TPGRL D + +T ++ FLVLDEAD L Sbjct 343 WLVSGLLTGGSTRTHEKAKLRKGVPILVSTPGRLLDHLQNTMSFQCAKTMFLVLDEADRL 402 Query 376 LSQGYSDFINRMHNQIPQVTSD---------------------GKRLQVIVCSATLHSFD 414 + G+ + I + + + + ++CSAT+ Sbjct 403 MDLGFEETIQGIIKALEGRRRNEINIEKEMDKEGGGTMRWPFWDRGRLNVLCSATV-DAK 461 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 V++L+ + P + +++ K D + + L ++ +++ Sbjct 462 VERLAGAALRDPVLFRSEKDEAEAKK------KAEGKDDAVIKALNEAQAIVIPQESEEK 515 Query 475 TRPGANSPEMWSEAIKILKGEYAV-----------RAIKEHKMDQAIIFCRTKIDCDNLE 523 P + + + L+ V + I + I+F + D Sbjct 516 FTPPSQLSQKYVVLPTKLRLVALVALLRSLISSVAKGISVSNGTKVIVFLSSTDAVDFHW 575 Query 524 QYFIQQGGGPDKKG---------------------------------------------- 537 + G + Sbjct 576 KLLGGVQMGQQGQQADGEKEEDEEEEGESVEERESDGESKAKKSKRKAKSKSTDDIVSLA 635 Query 538 ----HQFSCVCLHGDRKPHERKQNLERF--KKGDVRFLICTDVAARGIDIHGVPYVINVT 591 + LHG R +L+ F L T VA+RG+D+ V V+ Sbjct 636 SPLFPNTTLHRLHGSLPLRTRLASLKAFATSSSQPSVLFATSVASRGLDLPLVRAVVQYD 695 Query 592 LPDE--KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 LP E YVHR+GR RA + G A + V+ +E + G Sbjct 696 LPTEGGANEYVHRVGRTARAGKGGEAWAFVSPSEEGWVKWIEGKMG 741 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (36%), Gaps = 20/120 (17%) Query 2 AAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGG------------------GDV 42 F +G+ + ++ +M PT IQ +P +L DV Sbjct 200 TTFQGLGLNKLLINHLKGKMGVEKPTGIQRNCLPYMLSSPLNPDKKAGDEGPKEEPLRDV 259 Query 43 LMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 L+ A+TGSGKT ++ +P++Q + + + T+ + + Sbjct 260 LIQAQTGSGKTLSYLLPIVQTLLPLSRLSYID-RSIGTLAIILAPTRELAQQISKVLEQL 318 >sp|P0CQ95|DBP7_CRYNB ATP-dependent RNA helicase DBP7 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP7 PE=3 SV=1 Length=948 Score = 206 bits (525), Expect = 7e-55, Method: Composition-based stats. Identities = 92/526 (17%), Positives = 166/526 (32%), Gaps = 116/526 (22%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV- 277 P + P + G+E K P + ++ G + + Sbjct 223 KPTGIQRNCLPYMLSSPLNPDKKAGDEGPKEEPLRDVLIQAQTGSGKTLSYLLPIVQTLL 282 Query 278 --TQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYIDN-----------------P 316 ++ ++ A+I+ P+RELA+Q ++Q Sbjct 283 PLSRLSYIDRSIGTLAIILAPTRELAQQISKVLEQLLHMSFAASKEGSDDEDEDDRPFTR 342 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGL 375 L L+ GG + + L GV I+V TPGRL D + +T ++ FLVLDEAD L Sbjct 343 WLVSGLLTGGSTRTHEKAKLRKGVPILVSTPGRLLDHLQNTMSFQCAKTMFLVLDEADRL 402 Query 376 LSQGYSDFINRMHNQIPQVTSD---------------------GKRLQVIVCSATLHSFD 414 + G+ + I + + + + ++CSAT+ Sbjct 403 MDLGFEETIQGIIKALEGRRRNEINIEKEMDKEGGGTMRWPFWDRGRLNVLCSATV-DAK 461 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 V++L+ + P + +++ K D + + L ++ +++ Sbjct 462 VERLAGAALRDPVLFRSEKDEAEAKK------KAEGKDDAVIKALNEAQAIVIPQESEEK 515 Query 475 TRPGANSPEMWSEAIKILKGEYAV-----------RAIKEHKMDQAIIFCRTKIDCDNLE 523 P + + + L+ V + I + I+F + D Sbjct 516 FTPPSQLSQKYVVLPTKLRLVALVALLRSLISSVAKGISVSNGTKVIVFLSSTDAVDFHW 575 Query 524 QYFIQQGGGPDKKG---------------------------------------------- 537 + G + Sbjct 576 KLLGGVQMGQQGQQADGEKEEDEEEEGESVEERESDGESKAKKSKRKAKSKSTDDIVSLA 635 Query 538 ----HQFSCVCLHGDRKPHERKQNLERF--KKGDVRFLICTDVAARGIDIHGVPYVINVT 591 + LHG R +L+ F L T VA+RG+D+ V V+ Sbjct 636 SPLFPNTTLHRLHGSLPLRTRLASLKAFATSSSQPSVLFATSVASRGLDLPLVRAVVQYD 695 Query 592 LPDE--KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRG 635 LP E YVHR+GR RA + G A + V+ +E + G Sbjct 696 LPTEGGANEYVHRVGRTARAGKGGEAWAFVSPSEEGWVKWIEGKMG 741 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 43/120 (36%), Gaps = 20/120 (17%) Query 2 AAFSEMGVMPEIAQAVE-EMDWLLPTDIQAESIPLILGG------------------GDV 42 F +G+ + ++ +M PT IQ +P +L DV Sbjct 200 TTFQGLGLNKLLINHLKGKMGVEKPTGIQRNCLPYMLSSPLNPDKKAGDEGPKEEPLRDV 259 Query 43 LMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 L+ A+TGSGKT ++ +P++Q + + + T+ + + Sbjct 260 LIQAQTGSGKTLSYLLPIVQTLLPLSRLSYID-RSIGTLAIILAPTRELAQQISKVLEQL 318 >sp|Q9NUL7|DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28 OS=Homo sapiens OX=9606 GN=DDX28 PE=1 SV=2 Length=540 Score = 200 bits (509), Expect = 9e-55, Method: Composition-based stats. Identities = 97/443 (22%), Positives = 169/443 (38%), Gaps = 74/443 (17%) Query 209 GKDLGLAFEIPPHMKNQA--LFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDG-- 264 DLGL + ++ A + ++++ + G + A G Sbjct 128 FADLGLEPRVLHALQEAAPEVVQPTTVQSSTIPSLL----------RGRHVVCAAETGSG 177 Query 265 ----YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 Y++ Q + AP+ L++ PSRELA+Q + + + L Sbjct 178 KTLSYLLPLLQRLLGQPSLDSLPIPAPRGLVLVPSRELAQQVRAVAQPLGR---SLGLLV 234 Query 321 LLIIGGVAARDQLSVLENGV--DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 + GG R L D++V TPG L + + ++L Q+ FLVLDEAD LL + Sbjct 235 RDLEGGHGMRRIRLQLSRQPSADVLVATPGALWKALKSRLISLEQLSFLVLDEADTLLDE 294 Query 379 GYSDFINRMHN--QIPQVTSD-----GKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 + + ++ + I + +D + Q+++ AT V +L K+ Sbjct 295 SFLELVDYILEKSHIAEGPADLEDPFNPKAQLVLVGATFP-EGVGQLLNKV--------- 344 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + PD V + + K + + ++ +R + +E + I Sbjct 345 ----ASPDAVTTI---TSSKLHCIMPHVKQTFLR-------------LKGADKVAELVHI 384 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 LK + RA + ++FC + + L H+ + L G Sbjct 385 LK--HRDRAERTGPSGTVLVFCNSSSTVNWLGYIL---------DDHKIQHLRLQGQMPA 433 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER 611 R + F+K L+CTD+A+RG+D GV V+N P Q+Y+HR GRVGR Sbjct 434 LMRVGIFQSFQKSSRDILLCTDIASRGLDSTGVELVVNYDFPPTLQDYIHRAGRVGRVGS 493 Query 612 M--GLAISLVA-TEKEKVWYHVC 631 G IS V + + Sbjct 494 EVPGTVISFVTHPWDVSLVQKIE 516 Score = 72.9 bits (177), Expect = 4e-12, Method: Composition-based stats. Identities = 31/156 (20%), Positives = 63/156 (40%), Gaps = 10/156 (6%) Query 3 AFSEMGVMPEIAQAVEEM--DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 +F+++G+ P + A++E + + PT +Q+ +IP +L G V+ AAETGSGKT ++ + Sbjct 127 SFADLGLEPRVLHALQEAAPEVVQPTTVQSSTIPSLLRGRHVVCAAETGSGKTLSYL--L 184 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH 120 + + + + L R+++ H Sbjct 185 PLLQRLLGQPSLDSLPIPAPRGLVLVPSRELAQQVRAVAQPLGRS---LGLLVRDLEGGH 241 Query 121 GCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASL 156 G R + + + +V G W +++ L Sbjct 242 GMRRIRLQLSRQPSADVLVATPGAL---WKALKSRL 274 >sp|Q1DWF4|DBP9_COCIM ATP-dependent RNA helicase DBP9 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP9 PE=3 SV=2 Length=612 Score = 201 bits (512), Expect = 1e-54, Method: Composition-based stats. Identities = 100/538 (19%), Positives = 182/538 (34%), Gaps = 55/538 (10%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K + L L + + Q +++ + +A +K G Sbjct 23 KTFETLHLDPRLLQALTKQKFTKPTLVQAEAIPLVLS--------GKDVLARAKTGSGKT 74 Query 267 VKSQHSGNAQVTQTK---FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 + Q K + ALI+ P+RELAEQ N + F + +R + Sbjct 75 AAYLLPILQSILQKKIANPTQKSISALILVPTRELAEQVQNAVVSFSSFC-GKDIRSANL 133 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 V+ Q ++L + DI++ TP R ++ L+L+ + LV+DEAD +LS GY Sbjct 134 TQKVSDAVQRAILADLPDIIISTPARAIINTNSSSLSLNDLTHLVIDEADLVLSYGYEQD 193 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 + + IP + +Q ++ SATL S +V L P + L+ + + Sbjct 194 MQNLAKAIP------RGVQTLLMSATLTS-EVDALKGLFCRSPVILKLEEAEDEGAGIAQ 246 Query 444 VVVPVNPKTDRLWERLGKSHIRTD-----DVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 V L + V D + E + +L E V Sbjct 247 FAVKCAEDEKFLLTYVIFKLQLVKGKCIIFVGDIDRSYRLKLFLEQFGIKSCVLNSELPV 306 Query 499 RAIKE--HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 + + ++ + D + ++G ++ + + GD E+ Sbjct 307 NSRIHVVQEFNKGVYDIIIAADDQEVIGEIPKKGSKTPEQSNGEN-----GDEPEEEKGF 361 Query 557 NLERFKKGDVRFLICTDV------AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 + E + +RGID V V+N LP ++Y HRIGR GRA Sbjct 362 SDEDEVEPPPSKKRKKSTKEKDYGISRGIDFQDVACVLNFDLPTTAKSYTHRIGRTGRAG 421 Query 611 RMGLAISLVAT----------------EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 + G+A+SL+ E V + + K + I Sbjct 422 KTGMALSLIVPSELYGRHKPTSFPTAKNDEAVLAKIIKRQAKLGREVKPYNFDTKQIDAF 481 Query 655 EMQLLSEIEEHLNCTISQVE-PDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPT 711 ++ + + + +IK + + + ++ H L PT Sbjct 482 RYRMTDALRAVTRVAVQEARTKEIKQELLNSEKLKRHFEENPE-ELRQLRHDGELRPT 538 Score = 102 bits (254), Expect = 3e-21, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 50/103 (49%), Gaps = 3/103 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F + + P + QA+ + + PT +QAE+IPL+L G DVL A+TGSGKT A+ +P++ Sbjct 23 KTFETLHLDPRLLQALTKQKFTKPTLVQAEAIPLVLSGKDVLARAKTGSGKTAAYLLPIL 82 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 Q + + K + + + +F+ Sbjct 83 QSILQKKIANPTQK---SISALILVPTRELAEQVQNAVVSFSS 122 >sp|Q873H9|SPB4_NEUCR ATP-dependent rRNA helicase spb-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=spb-4 PE=3 SV=1 Length=654 Score = 202 bits (514), Expect = 1e-54, Method: Composition-based stats. Identities = 98/487 (20%), Positives = 191/487 (39%), Gaps = 78/487 (16%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHS 272 LA I ++ + ++ + L+ G ++ V + G + Sbjct 23 PLAQWILDYLSSMGFTQPTPVQKSCLELFRGNKD--------VVVEAVTGSGKTLAFLIP 74 Query 273 GNAQVTQTKF--LPNAPKALIVEPSRELAEQTLNNIKQFKKYID---------------- 314 ++ + + N + +I+ P+RELA Q N + K+ + Sbjct 75 VVEKLLRGEEPAKRNHVQGIIISPTRELATQIYNVLVSLVKFHEPSAEAISHAKSDEKRP 134 Query 315 ---NPKLRELLIIGGVAA--RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL--SQVRFL 367 P + L++GG D + L ++++GTPGRL +L+S+ + S L Sbjct 135 TATQPVVVPQLLVGGTTKAAEDLGTFLRLSPNLLIGTPGRLAELLSSAYVKAPASTFEVL 194 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 ++DEAD LL G+++ +NR+ +P K+ + + SA+L S V++L + +P Sbjct 195 IMDEADRLLDMGFANELNRILGYLP------KQRRTGLFSASL-SDAVERLITVGLLYPH 247 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + ++ + ++ + + T + + Sbjct 248 KITVRVKS----------------------------LKDGGIIQERKTPMSLQMSYLVTP 279 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 A + + + E + ++IIF + + + FS LHG Sbjct 280 ASQKMPAIVQLLEKLEPRPQRSIIFFSSCMAVKYFSRIL------GAVLPAGFSVTSLHG 333 Query 548 DRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 +P R++N ERF L+ TD+AARG+DI V VI P + + ++HR GR Sbjct 334 KLEPKVREKNYERFVNTTSPMVLLTTDLAARGLDIPQVDLVIQHDPPTDTKVFIHRCGRA 393 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL 666 GRA R GLA+ L+ +E+ + + R E ++ +E++ +S Sbjct 394 GRAGRRGLAVVLLQPGREEGYVQLLEVRQTPITPL---EKPAISVTPDEVERVSAAFRSQ 450 Query 667 NCTISQV 673 ++ Sbjct 451 ALADREI 457 Score = 84.4 bits (207), Expect = 1e-15, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 42/103 (41%), Gaps = 6/103 (6%) Query 2 AAFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 ++ + + I + M + PT +Q + L G DV++ A TGSGKT AF IP Sbjct 15 RSWDALTPPLAQWILDYLSSMGFTQPTPVQKSCLELFRGNKDVVVEAVTGSGKTLAFLIP 74 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 V++ + +E K S + Y+ + Sbjct 75 VVEKLLRG----EEPAKRNHVQGIIISPTRELATQIYNVLVSL 113 >sp|Q19614|SLFL2_CAEEL Schlafen-like protein 2 OS=Caenorhabditis elegans OX=6239 GN=tofu-2 PE=1 SV=3 Length=433 Score = 197 bits (500), Expect = 2e-54, Method: Composition-based stats. Identities = 82/179 (46%), Positives = 111/179 (62%), Gaps = 3/179 (2%) Query 88 LNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLM-KGKHYYEVSCHDQGLCR 146 + ++N D+ I GL C+S K W G R T GL GK+YYEV+ +GLCR Sbjct 6 PRESKLNKQDQDLHLEIDETGLACKSEVKKRWLGARGTAGLYGNGKYYYEVTITSKGLCR 65 Query 147 VGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFS 206 VGW+T+ SL++G FG+GGTG KS +K+FD+YG FT++D IGCYLD+D + +S Sbjct 66 VGWATLGGSLNIGKGLDSFGYGGTGMKSTHKKFDDYGLPFTLNDVIGCYLDLDSRTIWWS 125 Query 207 KNGKDLGLAFEIPPHMKNQA--LFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPD 263 KNG+ AF I KN LFPA + +N+ L NFG + FKFPP + F A+S AP+ Sbjct 126 KNGEQFPAAFSIDVKYKNSNTCLFPAVLCQNSSLSVNFGSQPFKFPPGNQFTAVSDAPN 184 >sp|A6R918|SPB4_AJECN ATP-dependent rRNA helicase SPB4 OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=SPB4 PE=3 SV=2 Length=676 Score = 202 bits (514), Expect = 2e-54, Method: Composition-based stats. Identities = 87/408 (21%), Positives = 160/408 (39%), Gaps = 78/408 (19%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP---------------------- 316 ++ + A+++ P+RELA Q N + + Sbjct 87 ESPIKKHHIGAILISPTRELATQIYNVLLSLLAFHGPSAARLQRTENNSGEVDESNPASS 146 Query 317 ------KLRELLIIGGV--AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ--VRF 366 K+ L++GG +D + L+ +++V TPGRL +L+S+ + SQ Sbjct 147 YPPSTLKIVPQLLLGGTTTPTQDLSAFLKQSPNVLVSTPGRLLELLSSPHAHCSQSSFEV 206 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 LVLDEAD LL G+ + + ++ ++P K+ + + SA++ S V ++ + P Sbjct 207 LVLDEADRLLDLGFKEDLQKILQRLP------KQRRTGLFSASV-SEAVDQIIRVGLRNP 259 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 + +K + + + R L +++ T H Sbjct 260 VKIAVKVKGA------------GLEDKRTPASLQMTYLLTPPTHK--------------- 292 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 L + + ++I++ T D + P +F+ + LH Sbjct 293 -----LPAVKYIVSTLSPTPQRSILYFSTCAAVDYYQHIL------PCILPDRFTTIPLH 341 Query 547 GDRKPHERKQNLERFKKG-DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 G P R++N RF L+ TDVAARG+DI V VI + P + + ++HR GR Sbjct 342 GKHPPQVRQKNFTRFVNSVTSSILLTTDVAARGLDIPAVDLVIQIDPPTDPKAFLHRCGR 401 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 GRA R GL++ + +E+ + + R + + Y Sbjct 402 AGRAGRRGLSVIFLHPGREEDYIAFLNVRKTPVTEFQSTSTSTPSQLY 449 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 45/103 (44%), Gaps = 6/103 (6%) Query 2 AAFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 A+ + + I A+ M + T +QA +IPL + DV++ A TGSGKT AF IP Sbjct 19 RAWDALTPPLSEWILDAISAMGFSRMTPVQASTIPLFMAHKDVVVEAVTGSGKTLAFLIP 78 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 V++ + ++ G S + Y+ + Sbjct 79 VVERLLRLESPIKKHHIGA----ILISPTRELATQIYNVLLSL 117 >sp|Q1E1R7|SPB4_COCIM ATP-dependent rRNA helicase SPB4 OS=Coccidioides immitis (strain RS) OX=246410 GN=SPB4 PE=3 SV=2 Length=653 Score = 201 bits (512), Expect = 2e-54, Method: Composition-based stats. Identities = 99/451 (22%), Positives = 170/451 (38%), Gaps = 86/451 (19%) Query 218 IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV 277 I + ++ + + G ++ V + G + ++ Sbjct 28 ILDAVAAMGFTRMTPVQASTIPLFMGHKD--------VVVEAVTGSGKTMAFLIPVVEKL 79 Query 278 TQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP------------------- 316 + + + A+IV P+RELAEQ + + Sbjct 80 LRLEAPIKKHHVGAIIVSPTRELAEQIYKVLLSLLAFHAPSAAAIQPSTSDETADGETTL 139 Query 317 --------KLRELLIIGG--VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 K+ L++GG A+D + L+ ++ V TPGRL +L+S+ ++ Q F Sbjct 140 PSYPSSTLKVVPQLLLGGATTPAQDLSTFLKRSPNLFVSTPGRLLELLSSPHVHCPQTSF 199 Query 367 --LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH 424 LVLDEAD LL G+ D + + ++P K+ + + SAT+ S V ++ + Sbjct 200 EVLVLDEADRLLDLGFKDDLQKTLARLP------KQRRTGLFSATV-SDAVDQIIRVGLR 252 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 P + +K + + + R L +++ T H R NS + Sbjct 253 NPVKIAVKVKGA-----------PGTEEKRTPASLQMTYLLTRPSHKIPAIRQILNSID- 300 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 + + I++ T D P F + Sbjct 301 -------------------NTPQKTILYFSTCAAVDYWSHVL------PSLLPEIFVTLP 335 Query 545 LHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 LHG P+ R++N RF L+ TDVAARG+DI V VI P + + Y+HR Sbjct 336 LHGKHPPNVRQKNFSRFTNSVSPSVLLTTDVAARGLDIPLVDLVIQFDPPTDPKAYLHRC 395 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 GR GRA R GL++ L+ +E+ + R Sbjct 396 GRAGRAGRRGLSVILLCPGREEDYIPFLEVR 426 Score = 94.4 bits (233), Expect = 1e-18, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 45/103 (44%), Gaps = 6/103 (6%) Query 2 AAFSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 ++ + + I AV M + T +QA +IPL +G DV++ A TGSGKT AF IP Sbjct 15 RSWQALTPPLSEWILDAVAAMGFTRMTPVQASTIPLFMGHKDVVVEAVTGSGKTMAFLIP 74 Query 60 VIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 V++ + ++ G S + Y + Sbjct 75 VVEKLLRLEAPIKKHHVGA----IIVSPTRELAEQIYKVLLSL 113 >sp|Q5B8F4|SPB4_EMENI ATP-dependent rRNA helicase spb4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=spb4 PE=3 SV=1 Length=638 Score = 199 bits (506), Expect = 1e-53, Method: Composition-based stats. Identities = 89/402 (22%), Positives = 156/402 (39%), Gaps = 73/402 (18%) Query 262 PDGYIVKSQHSGNAQVTQTK--FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNP--- 316 G + ++ + + + A+IV P+RELA Q N + + Sbjct 61 GSGKTLSFLIPVVEKLLRLEEPIKKHHVGAIIVSPTRELASQIYNVLTSLLAFHPASAAV 120 Query 317 -------------------KLRELLIIGGV--AARDQLSVLENGVDIVVGTPGRLDDLVS 355 ++ L++GG A D + L+ +++V TPGRL +L+S Sbjct 121 INTSETEDVPRPKHSSSVLRVVPQLLLGGSTSPAEDLSTFLKRSPNLLVATPGRLLELLS 180 Query 356 TGKLNL--SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 + + S LVLDEAD LL G+ + + + ++P K+ + + SA++ S Sbjct 181 SPHVYCPQSSFEMLVLDEADRLLDLGFKETLQNILRRLP------KQRRTGLFSASV-SE 233 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 V ++ + P V +K + + R L +++ Sbjct 234 AVDQIVRVGLRNPVKVVVKVKGA-----------SGVDDKRTPASLQMTYLTQPPTGKFP 282 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 + NS + ++I F T D L P Sbjct 283 ALKHILNSV--------------------QPTPSKSIFFVSTCSGVDYLSVIL------P 316 Query 534 DKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR-FLICTDVAARGIDIHGVPYVINVTL 592 G+ F + LHG + R++N RF L+ TDVA+RG+DI V V+ + Sbjct 317 LILGNDFQLIPLHGKHPANVRQKNFNRFVNAHNPAILLTTDVASRGLDIPSVDLVVQIDP 376 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 P + + ++HR GR GRA R GL++ L+ +E+ + R Sbjct 377 PSDPKTFIHRCGRAGRAGRRGLSVVLLHPGREEDYVSFLEVR 418 Score = 94.8 bits (234), Expect = 7e-19, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 4/95 (4%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYET 67 + + AV M + T +QA +IPL + DV++ A TGSGKT +F IPV++ + Sbjct 20 PLSEWVLDAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRL 79 Query 68 LKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 +E K S + Y+ ++ Sbjct 80 ----EEPIKKHHVGAIIVSPTRELASQIYNVLTSL 110 >sp|Q54CD6|DDX5_DICDI Probable ATP-dependent RNA helicase ddx5 OS=Dictyostelium discoideum OX=44689 GN=ddx5 PE=3 SV=1 Length=697 Score = 199 bits (505), Expect = 3e-53, Method: Composition-based stats. Identities = 82/396 (21%), Positives = 147/396 (37%), Gaps = 59/396 (15%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDIVV 344 L++ P+REL Q +N + ++ +I GG++ Q+ LE I++ Sbjct 291 GILVLVLVPTRELGLQVHSNTLIITQLFG---IKTSVIYGGISKNLQIEQLEKEKPQILI 347 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TPGRL +++ G ++LS V LVLDEAD +LS+G + ++ QI Q I Sbjct 348 STPGRLIEMIENGHVDLSSVTMLVLDEADKMLSKGLIPQLKQIRGQI------RPDSQNI 401 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SAT +K++S+ + P+ G +P +HI Sbjct 402 LFSATFPD-SLKEVSKDWIKDPSIRLRIGSSELPK---------------------LNHI 439 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 + D + +P A + K + + I+F + + Sbjct 440 QQDAQLIAHHKKPRALIKLLSEPQFK--------------EKKKTIVFFNKIKELKRISI 485 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 ++ + G+ R++ + +F L+ TD+ RGI I + Sbjct 486 MLLK---------SNIKHDTIFGNIDQELREKLINKFSSSRSTLLLSTDIIGRGIHIDDI 536 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAER--MGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 +IN P + Y HR+GR GR+++ A S + + N Sbjct 537 FNIINYDFPRSLEQYCHRVGRAGRSDKVVNPKAFSFLTNSDSYLVEPFVQFLKDQHQNIS 596 Query 643 LKEDGGCTIWYNEMQL--LSEIEEHLNCTISQVEPD 676 + C + LS+ ++ VE D Sbjct 597 IPFLKLCNENFGTKFEFTLSKRKQKKLAQKDDVEKD 632 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 8/89 (9%) Query 18 EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL----KDQQE 73 ++ + PT Q + P IL G D++ + GSGKT + P+I + K++ Sbjct 222 KKTQFPTPTLFQQYAWPAILTGHDIIGTSLPGSGKTLGYLAPMIPHCLARVDRGGKNKIT 281 Query 74 GKKGK----TTIKTGASVLNKWQMNPYDR 98 G+K + + + + Sbjct 282 GEKAPKQYTGILVLVLVPTRELGLQVHSN 310 >sp|Q5A4P9|DBP9_CANAL ATP-dependent RNA helicase DBP9 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=DBP9 PE=3 SV=2 Length=574 Score = 195 bits (495), Expect = 1e-52, Method: Composition-based stats. Identities = 99/579 (17%), Positives = 191/579 (33%), Gaps = 134/579 (23%) Query 235 NAELKFNFGEEEFKFPPKDG----FVALSKAPDGYIVKSQHSGNAQVTQTKFLPN----- 285 + L + F P +AL + D S SG + N Sbjct 22 DPRLLQAIDQLGFSNPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPIVNNLLTDD 81 Query 286 ---APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 K++I+ P+REL+ Q +++ + N K+ L + + + S+L N +I Sbjct 82 SSQGIKSIILVPTRELSNQVFQFVEKLLTFSTN-KINVLNLSSSYSDQVLNSLLVNKPEI 140 Query 343 VVGTPGRLDDLV--STGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 ++ TP +L ++ + ++LS V+ L +DE D +LS GY D + ++ + +P K Sbjct 141 IISTPAKLIQILEKNEKNIDLSTVKNLTIDEVDLVLSFGYLDDLKKLESYLP----VKKN 196 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 LQ + SAT++ D+ L ++ P + L + + + + L + Sbjct 197 LQTFLMSATVND-DLDDLKQRYCTKPAILKLNEDSANQNNLVQYYAKTTEFDKFLLAYV- 254 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + + IK + I F Sbjct 255 ----------------------------------IFKLNLIK----GKTIAFVNNIDRGY 276 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA----- 575 L+ + Q G C L+ + + R +E F K LI TD Sbjct 277 RLKLFLEQFG---------IRCCILNSELPINSRLHIVEEFNKNVYHLLIATDETNELNE 327 Query 576 --------------------------------------ARGIDIHGVPYVINVTLPDEKQ 597 +RG+D V V+N LP + Sbjct 328 EQDDDEDGDEDTKDKGNAETKPKKSKKSKFKQDKEYGVSRGVDFRNVACVLNFDLPTSSK 387 Query 598 NYVHRIGRVGRAERMGLAISLVAT----------------EKEKVWYHVCSSRGKGCYNT 641 Y+HRIGR RA + G+A+S V + EKV + + K + Sbjct 388 AYIHRIGRTARAGKAGMALSFVLPLSEFGKHKTASLASAKKDEKVLGRIVKQQSKNGFEI 447 Query 642 RLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE-PDIKVPVDEFDGKVTYGQKRAAGGGS 700 + + + + + + ++K + + + ++ S Sbjct 448 KPYQFDMKQVEGFRYRADDAFRAVTQTAVREARVKELKNELINSEKLKRFFEENPQDLAS 507 Query 701 YKGHVDILAPTVQELAA------LEKEAQTSFLHLGYLP 733 + ++ +Q L + A+ ++G++P Sbjct 508 LRHDKELHPARIQSQLKNVPQYLLPESARQDVKNIGFVP 546 Score = 96.0 bits (237), Expect = 3e-19, Method: Composition-based stats. Identities = 29/118 (25%), Positives = 53/118 (45%), Gaps = 5/118 (4%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPV 60 + + P + QA++++ + PT IQ+ +IPL L D++ A TGSGKT A+ IP+ Sbjct 14 TTWDSFNLDPRLLQAIDQLGFSNPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPI 73 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 + + D +G K + I L+ ++ F+ + S + Sbjct 74 VNNLLTD--DSSQGIK--SIILVPTRELSNQVFQFVEKLLTFSTNKINVLNLSSSYSD 127 >sp|A5DC85|DBP9_PICGU ATP-dependent RNA helicase DBP9 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=DBP9 PE=3 SV=2 Length=586 Score = 194 bits (494), Expect = 2e-52, Method: Composition-based stats. Identities = 92/584 (16%), Positives = 195/584 (33%), Gaps = 123/584 (21%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 ++ L + + ++++ + + + K +A + G Sbjct 38 ENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLED-------KRDIIAKASTGSGKTGAY 90 Query 270 QHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 + + K++I+ P++ELA Q I++ Y ++ + ++ + V+ Sbjct 91 SIPIIQNILSEGLSEHNIKSVILVPTKELANQVTKFIEKLLVYCNS--ITQINLATNVSD 148 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFLVLDEADGLLSQGYSDFINRM 387 + +S+L +I++ TP RL ++ ++L+ V L +DE D +LS GY + + ++ Sbjct 149 QVVVSLLSAKPEIIISTPSRLTTVLEKHASIVDLTTVTSLAIDEVDLMLSYGYMEDLQKL 208 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP 447 + +P + LQ + SAT++ DV L + P + L + + + Sbjct 209 DDFLP----IKRNLQTYLMSATVND-DVNDLKARFCTKPAIIKLNDNEENQNRLVQFYAR 263 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 + K +A K H + Sbjct 264 TSE----------------------------------------FDKFLFAYVIFKLHLIK 283 Query 508 -QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + + F L+ + Q G C L+ + + R ++ F K Sbjct 284 GKTLAFVNNIDRGYRLKLFLEQFG---------VRCCILNSELPVNSRLHIVDEFNKNVY 334 Query 567 RFLICTDV----------------------------------AARGIDIHGVPYVINVTL 592 LI +D +RG+D V V+N L Sbjct 335 NLLIASDESTEVTEQEGEDDQEDSKPEKSKKKKGKKVDGEYGVSRGVDFRNVACVLNFDL 394 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVAT----------------EKEKVWYHVCSSRGK 636 P ++YVHR+GR RA + G+A+S V EKV + S+ K Sbjct 395 PTTSRSYVHRVGRTARAGKAGMALSFVVPVKEVGKHKTATNPGAKRDEKVLARIVKSQSK 454 Query 637 GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE-PDIKVPVDEFDGKVTYGQKRA 695 + + + + + + I + ++K + + + ++ Sbjct 455 NGFEIKPYQFDMTQVEGFRYRAEDAFRAVTSAAIREARIRELKNEIMNSEKLKRFFEENP 514 Query 696 AGGGSYKGHVDILAPTVQELAA------LEKEAQTSFLHLGYLP 733 S + ++ VQ L + A+ +G++P Sbjct 515 QDLASLRHDKELHPAKVQSQLKRVPDYLLPESARQDPKKIGFVP 558 Score = 91.0 bits (224), Expect = 9e-18, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILG-GGDVLMAAETGSGKTGAFSIPV 60 A + + P + QAV ++ + PT IQ+ +IPL L D++ A TGSGKTGA+SIP+ Sbjct 35 AKWENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDIIAKASTGSGKTGAYSIPI 94 Query 61 IQIVY 65 IQ + Sbjct 95 IQNIL 99 >sp|Q6FST5|DBP6_CANGA ATP-dependent RNA helicase DBP6 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=DBP6 PE=3 SV=1 Length=651 Score = 196 bits (497), Expect = 2e-52, Method: Composition-based stats. Identities = 84/383 (22%), Positives = 147/383 (38%), Gaps = 52/383 (14%) Query 260 KAPDGYIVKSQHSGNAQVTQTKFLP-------NAPKALIVEPSRELAEQTLNNIKQFKKY 312 + D + S SG + N + LI+ P++ L Q + Q + Sbjct 245 RIGDILVNASTGSGKTLAYSIPIIQTLSSRTVNKLRVLIILPTKLLINQVFQTMSQLAEG 304 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 L + +L+ DI + TPGRL D ++ ++L ++FLVLDEA Sbjct 305 TSLVITVSKL--ENSFNEEHKRLLKTEPDIFITTPGRLVDHLTNSSISLRNLKFLVLDEA 362 Query 373 DGLLSQGYSDFINRMHNQI--PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 D LL+Q + ++I + ++ + + +V SATL + + +KL++ ++ PT Sbjct 363 DRLLNQSFQNWIPEVMSKFKSDKFDQMPGSIIKMVFSATLTT-NTEKLNDLQLYNPTL-- 419 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 D+V +P + +L KS + + G Sbjct 420 -----FATDSVKLYNLPPTLQEYQLQIPSAKSVYKPLYLLKLLEQLSG------------ 462 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 + ++F R+ LE G Q ++ + Sbjct 463 ----------------GKTLVFVRSNESSLKLEVLLKSLIKG-HMTTLQIVVHSINSNNS 505 Query 551 PHERKQNLERFKK----GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 E ++ + F K LI TD+ +RGIDI + VIN +P Q YVHR GR Sbjct 506 KAENRRLVTDFTKESLPNQTNVLITTDLMSRGIDIENIANVINYDVPISSQQYVHRCGRT 565 Query 607 GRAERMGLAISLVATEKEKVWYH 629 RA + G A +++ + E ++ Sbjct 566 ARANKDGKAYNMLVGKGEAQFWK 588 Score = 53.6 bits (127), Expect = 5e-06, Method: Composition-based stats. Identities = 32/130 (25%), Positives = 52/130 (40%), Gaps = 28/130 (22%) Query 2 AAFSEM--GVMPEIAQAVEEMDWLLPT-DIQAESIPLILG-----------------GGD 41 +F E + P++ +E+ + T IQ + L G D Sbjct 191 KSFEEYSDDLTPKLLNNIEKY-FSKSTFPIQTAMLDQYLKLINFTLKTSKKNFTRRIG-D 248 Query 42 VLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKW--QMNPYDRG 99 +L+ A TGSGKT A+SIP+I +TL + K I ++N+ M+ G Sbjct 249 ILVNASTGSGKTLAYSIPII----QTLSSRTVNKLRVLIILPTKLLINQVFQTMSQLAEG 304 Query 100 SAFAIGSDGL 109 ++ I L Sbjct 305 TSLVITVSKL 314 >sp|Q9SW44|RH16_ARATH DEAD-box ATP-dependent RNA helicase 16 OS=Arabidopsis thaliana OX=3702 GN=RH16 PE=2 SV=1 Length=626 Score = 194 bits (492), Expect = 7e-52, Method: Composition-based stats. Identities = 112/565 (20%), Positives = 194/565 (34%), Gaps = 120/565 (21%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 K+ ++LGL + + + + +++ + + + VA +K G Sbjct 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYIL--------EGKDVVARAKTGSGKT 97 Query 267 VKSQHSGNAQVTQTKFLPN---APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 + ++ + AP A I+ PSREL +Q + + +L+ + + Sbjct 98 LAYLLPLLQKLFSADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELC-RVQLKAVQL 156 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL----SQVRFLVLDEADGLLSQG 379 ++A D + L +I+V TP + + G L + LVLDEAD LLS G Sbjct 157 TSSMSASDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYG 216 Query 380 YSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL----KGED 435 Y D + + + IP +R Q ++ SAT S DV+KL + I+H P + L E+ Sbjct 217 YEDNLRSVTSIIP------RRCQCLLMSAT-TSSDVEKLKKLILHNPIVLTLTEDNDKEE 269 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 +VP V + + + Sbjct 270 AVPSNVQQFWISCSAQDK---------------------------------------LLH 290 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 E + +IF T L+ + + G L+G+ + R Sbjct 291 ILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFG---------IKSAILNGELPQNSRL 341 Query 556 QNLERFKKGDVRFLICTDVAA-----------------------------------RGID 580 LE+F G +LI TD + RGID Sbjct 342 HILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGID 401 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 V VIN +P Y+HRIGR GRA G ++SL++ ++ + + + S Sbjct 402 FKKVHTVINFDMPQSVTGYIHRIGRTGRAYSSGSSVSLISPDEMEGFEDIKSFLAS---- 457 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI-KVPVDEFDGKVTYGQKRAAGGG 699 ++ I L E L V + K+ V E + + Sbjct 458 ---DKNKDIDIITPFPLLTENAVESLRYRAEDVAKSVTKIAVRESRAQDL--RNEIINSE 512 Query 700 SYKGHVDILAPTVQELAALEKEAQT 724 K H + + L + ++T Sbjct 513 KLKAHFEANPRDLDLLRHDKPLSKT 537 Score = 103 bits (256), Expect = 1e-21, Method: Composition-based stats. Identities = 29/101 (29%), Positives = 47/101 (47%), Gaps = 3/101 (3%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F E+G+ + +A+ + PT IQ +IP IL G DV+ A+TGSGKT A+ +P++ Sbjct 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 Q ++ KK + Y S+ Sbjct 106 QKLFS---ADSVSKKKLAPSAFILVPSRELCQQVYTEVSSL 143 >sp|P53734|DBP6_YEAST ATP-dependent RNA helicase DBP6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DBP6 PE=1 SV=1 Length=629 Score = 194 bits (492), Expect = 8e-52, Method: Composition-based stats. Identities = 94/514 (18%), Positives = 188/514 (37%), Gaps = 79/514 (15%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQAL------FPACVLKNAELKFNFGEEEFKF 249 ++++ ++F G L + + A +L+N F+ + Sbjct 144 MNLNTNSLQFKSTG-WLNTEKIYYDNSLIKPFSDYANELEAKLLQNICKNFSTNTFPIQS 202 Query 250 PPKDGFVAL-------------SKAPDGYIVKSQHSGNAQVTQTKFLP-------NAPKA 289 D + + + D + + SG + N + Sbjct 203 IILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLFKRQINRLRC 262 Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTPG 348 +I+ P++ L Q + + + L + + +D+ L N DI++ TPG Sbjct 263 IIIVPTKLLINQVYTTLTKLTQ---GTSLIVSIAKLENSLKDEHKKLSNLEPDILITTPG 319 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV--IVC 406 RL D ++ +NL ++FL++DEAD LL+Q + + ++ + + D V ++ Sbjct 320 RLVDHLNMKSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDTLPGNVIKMIF 379 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL + + +KL+ ++ P + + K +L +L + +I Sbjct 380 SATLTT-NTEKLNGLNLYKPK----------------LFLKQTDKLYQLPNKLNEFNINI 422 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM--DQAIIFCRTKIDCDNLEQ 524 K L Y++ H + +IF ++ L + Sbjct 423 PTA----------------KSVYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIRLSK 466 Query 525 YF-------IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK----KGDVRFLICTD 573 Q + + S ++ + E K+ + F + LI TD Sbjct 467 LLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHHSESAGITILITTD 526 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + +RGIDI+ + VIN P Q YVHR+GR RA +G A +L+ E+ ++ + Sbjct 527 IMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDDLNK 586 Query 634 RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 + + T+ ++ +L + E L Sbjct 587 DLDRDGKSVQPLELDFTLLESDSELYTSSLESLK 620 Score = 47.0 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 28/125 (22%) Query 1 MAAFSEMG--VMPEIAQAVEEMDWLLPT-DIQA---ESIPLIL------GGG-------D 41 + FS+ + ++ Q + + ++ T IQ+ +SI +L D Sbjct 171 IKPFSDYANELEAKLLQNICK-NFSTNTFPIQSIILDSILPVLNFTLNVSKRNFTRRIGD 229 Query 42 VLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA 101 +L+ A TGSGKT A+SIP++Q +++ ++ Y + Sbjct 230 ILVNAATGSGKTLAYSIPIVQTLFK--------RQINRLRCIIIVPTKLLINQVYTTLTK 281 Query 102 FAIGS 106 G+ Sbjct 282 LTQGT 286 >sp|A6ZSB3|DBP6_YEAS7 ATP-dependent RNA helicase DBP6 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=DBP6 PE=3 SV=1 Length=629 Score = 193 bits (491), Expect = 1e-51, Method: Composition-based stats. Identities = 94/514 (18%), Positives = 188/514 (37%), Gaps = 79/514 (15%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQAL------FPACVLKNAELKFNFGEEEFKF 249 ++++ ++F G L + + A +L+N F+ + Sbjct 144 MNLNTNSLQFKSTG-WLNTEKIYYDNSLIKPFSDYANELEAKLLQNICKNFSTNTFPIQS 202 Query 250 PPKDGFVAL-------------SKAPDGYIVKSQHSGNAQVTQTKFLP-------NAPKA 289 D + + + D + + SG + N + Sbjct 203 IILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLFKRQINRLRC 262 Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN-GVDIVVGTPG 348 +I+ P++ L Q + + + L + + +D+ L N DI++ TPG Sbjct 263 IIIVPTKLLINQVYTTLTKLTQ---GTSLIVSIAKLENSLKDEHKKLSNLEPDILITTPG 319 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV--IVC 406 RL D ++ +NL ++FL++DEAD LL+Q + + ++ + + D V ++ Sbjct 320 RLVDHLNMKSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDTLPGNVIKMIF 379 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 SATL + + +KL+ ++ P + + K +L +L + +I Sbjct 380 SATLTT-NTEKLNGLNLYKPK----------------LFLKQTDKLYQLPNKLNEFNINI 422 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM--DQAIIFCRTKIDCDNLEQ 524 K L Y++ H + +IF ++ L + Sbjct 423 PTA----------------KSIYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIRLSK 466 Query 525 YF-------IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK----KGDVRFLICTD 573 Q + + S ++ + E K+ + F + LI TD Sbjct 467 LLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHPSESAGITILITTD 526 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + +RGIDI+ + VIN P Q YVHR+GR RA +G A +L+ E+ ++ + Sbjct 527 IMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDDLNK 586 Query 634 RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 + + T+ ++ +L + E L Sbjct 587 DLDRDGKSVQPLELDFTLLESDSELYTSSLESLK 620 Score = 47.0 bits (110), Expect = 6e-04, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 28/125 (22%) Query 1 MAAFSEMG--VMPEIAQAVEEMDWLLPT-DIQA---ESIPLIL------GGG-------D 41 + FS+ + ++ Q + + ++ T IQ+ +SI +L D Sbjct 171 IKPFSDYANELEAKLLQNICK-NFSTNTFPIQSIILDSILPVLNFTLNVSKRNFTRRIGD 229 Query 42 VLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSA 101 +L+ A TGSGKT A+SIP++Q +++ ++ Y + Sbjct 230 ILVNAATGSGKTLAYSIPIVQTLFK--------RQINRLRCIIIVPTKLLINQVYTTLTK 281 Query 102 FAIGS 106 G+ Sbjct 282 LTQGT 286 >sp|A3LV40|DBP9_PICST ATP-dependent RNA helicase DBP9 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=DBP9 PE=3 SV=1 Length=581 Score = 191 bits (485), Expect = 3e-51, Method: Composition-based stats. Identities = 100/556 (18%), Positives = 185/556 (33%), Gaps = 134/556 (24%) Query 235 NAELKFNFGEEEFKFPPKDG----FVALSKAPDGYIVKSQHSGNAQVTQTKFLPN----- 285 +A L + F+ P +AL + D S SG + N Sbjct 23 DARLVQAIDQLGFEHPTLIQASAIPLALEEKRDIIAKASTGSGKTGAYVIPIIHNLLTDA 82 Query 286 -------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN 338 K++I+ P+REL+ Q L +++ Y +N ++ + + ++ + S+L N Sbjct 83 EVESGNHHIKSIILVPTRELSNQVLQFVEKLLVYSNN-RINAINLSANLSDQVVNSLLMN 141 Query 339 GVDIVVGTPGRLDDLVSTGK----LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 +I++ TP +L ++ ++LS VR L +DE D +LS GY + + ++ +P Sbjct 142 KPEIIISTPAKLIQVLEKNANKDLIDLSTVRNLTIDEVDLVLSYGYLEDLQKLETYLP-- 199 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 K LQ + SAT++ D+ L + P + L E+S + + Sbjct 200 --IKKNLQTFLMSATVND-DLNDLKTRFCSRPAILKLNDEESAQNKLIQYYARTTEFDKF 256 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L + + + IK + ++F Sbjct 257 LLAYV-----------------------------------IFKLNLIK----GKTLVFVN 277 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 L+ + Q G C L+ + + R +E + K LI TD Sbjct 278 NIDRGYRLKLFLEQFG---------IRCCILNSELPINSRLHIVEEYNKNVYNLLIATDE 328 Query 575 A------------------------------------------ARGIDIHGVPYVINVTL 592 +RG+D V V+N L Sbjct 329 TNDFTVEKDEQQQEESQDKKASSAKTKQSKKSKKQKKDTEYGVSRGVDFRNVACVLNFDL 388 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVAT----------------EKEKVWYHVCSSRGK 636 P + Y+HRIGR RA + G+A+S V + EK+ + + K Sbjct 389 PTTSKAYIHRIGRTARAGKAGMALSFVLPIKEVGKHKTASLSTAKKDEKILRRIVKQQSK 448 Query 637 GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE-PDIKVPVDEFDGKVTYGQKRA 695 + + + + + I + ++K + D + ++ Sbjct 449 NGFEIKPYQFDMKQVEGFRYRSEDAFRAVTQTAIREARIKELKNELINSDKLKRFFEENP 508 Query 696 AGGGSYKGHVDILAPT 711 S + H L PT Sbjct 509 QDLASLR-HDKELHPT 523 Score = 92.5 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 1/106 (1%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPV 60 +++ + + QA++++ + PT IQA +IPL L D++ A TGSGKTGA+ IP+ Sbjct 15 SSWDSFHLDARLVQAIDQLGFEHPTLIQASAIPLALEEKRDIIAKASTGSGKTGAYVIPI 74 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGS 106 I + + + K+ I L+ + ++ ++ Sbjct 75 IHNLLTDAEVESGNHHIKSIILVPTRELSNQVLQFVEKLLVYSNNR 120 >sp|Q74ZC1|DBP9_EREGS ATP-dependent RNA helicase DBP9 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP9 PE=3 SV=1 Length=595 Score = 190 bits (483), Expect = 9e-51, Method: Composition-based stats. Identities = 104/549 (19%), Positives = 193/549 (35%), Gaps = 55/549 (10%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 SK L + +K+ +++++ + ++ K Sbjct 15 SKTFSSFQLDLRLQQSLKSSGFHHPTLIQSSAIPLALEQKR--DIIAKASTGSGKTLAYL 72 Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 I Q + TQ +++ P+RELA+Q +++ Y +R L I Sbjct 73 IPVVQTILEHKSTQGADRTTGTLGVVLVPTRELAQQVRVVLEKLVLYCS-KDIRLLNISA 131 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL---NLSQVRFLVLDEADGLLSQGYSD 382 V +L +I++ TP +L ++ L +L +RFLV+DE D +L+ GY + Sbjct 132 NVDDSVLGPLLAENPEIIISTPSQLVKILEGKHLQTISLRDLRFLVIDEVDLILTFGYQE 191 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED--SVPDT 440 + ++ +P K LQ + SATL+ ++++L K P + L ++ + Sbjct 192 DLLKISQYLP----LKKNLQAFLMSATLN-EEIQELKTKFCRSPAILKLNDDEINKNKNK 246 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTD-----DVHAKDNTRPGANSPEMWSEAIKILKGE 495 + V V+ L + V+ D E + IL E Sbjct 247 LLQYYVKVSEFDKFLLCYVIFKLSLIKGKTIIFVNTIDRGYRLKLVLEQFGIRSCILNSE 306 Query 496 YAVRAIKEHKMD------QAIIFCRTKIDCDNLEQYFIQQG--GGPDKKGHQFSCVCLHG 547 + + + + Q +I + ++ ++ G G + + Sbjct 307 LPLNSRQHIVDEFNKNVYQLLIATDDNEYIEEEDEETVEAGEEGSEKLEEGGEKLEEITS 366 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 KQ + + K + A+RG+D V V+N LP ++YVHRIGR Sbjct 367 KTSSTNGKQKIAK-KDKEYG-------ASRGVDFQNVSCVLNFDLPTTAKSYVHRIGRTA 418 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 RA + G AIS V GK + + I + + + + L Sbjct 419 RAGKSGTAISFVVP---------LKEYGKHKPSMLVTAKKDEKI----LARVIKQQSKLG 465 Query 668 CTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFL 727 I D+K ++ + R G V + V+EL ++ Sbjct 466 FQIEPYNFDVK--------QIEGFRYRMEDGFRAVTQVAVREARVKELKQELLASEKLKR 517 Query 728 HLGYLPNQL 736 H P+ L Sbjct 518 HFEENPHDL 526 Score = 92.5 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 28/94 (30%), Positives = 44/94 (47%), Gaps = 2/94 (2%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPV 60 FS + + Q+++ + PT IQ+ +IPL L D++ A TGSGKT A+ IPV Sbjct 16 KTFSSFQLDLRLQQSLKSSGFHHPTLIQSSAIPLALEQKRDIIAKASTGSGKTLAYLIPV 75 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMN 94 +Q + E K Q + T+ + Sbjct 76 VQTILEH-KSTQGADRTTGTLGVVLVPTRELAQQ 108 >sp|O74764|SPB4_SCHPO ATP-dependent rRNA helicase spb4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spb4 PE=3 SV=1 Length=606 Score = 189 bits (481), Expect = 2e-50, Method: Composition-based stats. Identities = 107/533 (20%), Positives = 197/533 (37%), Gaps = 82/533 (15%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + + + + + Q ++ + ++ V + G + Sbjct 3 FQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKD--------LVVEAVTGSGKTLA 54 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY-----IDNPKLRELLI 323 +VT+ ALIV P+RELA Q N K+ Y KL + Sbjct 55 YLLPCFDKVTRRDTDETGLGALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMY 114 Query 324 IGG--VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 IGG D S E +V+GTPGRL++++S ++ + L+LDEAD L+ G+ Sbjct 115 IGGKGTLTNDLASFREKNPSVVIGTPGRLNEMLS--HISSKHLEILILDEADTLIDMGFQ 172 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + + +Q+P K+ + + SAT++ L + V + Sbjct 173 RTLQSIISQLP------KQRRTGLFSATMNDTVSSFLKIAGLRNSVRVSVT--------- 217 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 K +TR ++ I K + + + Sbjct 218 --------------------------VTSKKIDTRTPSSLAIQSLVIPPIYKVQCMIHLL 251 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 + ++AI+F + + F+ F V LHG + R +N E+F Sbjct 252 CTIEYEKAIVFFSSCASVEYFNSLFL-------TYKLPFEIVALHGQQVQSNRSRNFEKF 304 Query 562 KKGDVR-FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 KK + + L TD+A+RG+DI V +V+ + P + +++ HR GR GRA R G+AI L+ Sbjct 305 KKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSFSHRCGRAGRAGRAGVAIVLLN 364 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVP 680 +E+ + + R + TR+ L ++ + Sbjct 365 DGREEEYEELL--RVRKVPITRIDTPIEALDL-----------SRLKVLTHELRKIVSKD 411 Query 681 VDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLP 733 D +D + + + +Y H +++L + + LHL +P Sbjct 412 RDLYDKGL---RAFVSHVRAYTKHHASFIFRIKDLDLGQLATAYALLHLPKMP 461 Score = 88.6 bits (218), Expect = 5e-17, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 6/100 (6%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +F + + + AV + T +QA +IPL L D+++ A TGSGKT A+ +P Sbjct 2 SFQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCFD 61 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 V T +D E G + + + ++ Sbjct 62 KV--TRRDTDETGLGALIV----APTRELATQIFNVTKEL 95 >sp|A4QTR1|DBP9_PYRO7 ATP-dependent RNA helicase DBP9 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DBP9 PE=3 SV=1 Length=636 Score = 190 bits (482), Expect = 2e-50, Method: Composition-based stats. Identities = 101/540 (19%), Positives = 187/540 (35%), Gaps = 50/540 (9%) Query 211 DLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 DLGL + + Q+ ++++ + +A +K G Sbjct 47 DLGLDPRLLQAVAQQSFQKPTLVQSKAIPLAL--------EGRDVLAKAKTGSGKTAAYV 98 Query 271 HSGNAQVTQTKFLPNA---PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV 327 V + K + +LI+ P+REL Q +++F + +++ + + V Sbjct 99 LPILQAVLKRKQINPGATYISSLILVPTRELTVQVTKEVERFSAFCA-KEVQVVGLTDKV 157 Query 328 AARDQLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINR 386 + Q S+L++ DIVV TP V +G L+L ++ LVLDEAD +LS GY + + + Sbjct 158 SDAVQRSLLQSSSPDIVVSTPSTAWRNVDSGALSLDKLTHLVLDEADLVLSYGYDEDLEK 217 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + +P K +Q ++ SATL ++ L + P +DL+ D+ + +V Sbjct 218 VARGLP------KGVQTVMTSATLTD-EIDTLKGIFLRDPVLLDLEEPDAEGSEITQYIV 270 Query 447 PVNPKTDRLWER-LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 L L K + V +++ E I + Sbjct 271 KCGEDEKFLLAYILFKLQLIKGKVIIFVADVDRCYRLKLFFEQFGIRSCILNSELPVNSR 330 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + F R N+ I G + K++ + D Sbjct 331 ISVVEEFNR------NVYDIIIASDENEMMGDEDRPAPNGDGKEEAEVDKKHENEDEGQD 384 Query 566 VRFLICTDV----------------AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 +RGID V V+N LP +Y HRIGR GRA Sbjct 385 GEASKAAPRPKKKRKMDRKRDKQYGVSRGIDFKNVAVVVNFDLPLSSTSYTHRIGRTGRA 444 Query 610 ERMGLAISLVATEK---EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL--SEIEE 664 + G+ +S ++ + + + S+ R+ + + ++E Sbjct 445 GQAGMVLSFYVPKELFRKHIPTSIDSAENDEKVLARVIKQQKKLGREIKPYNFDRDQVES 504 Query 665 HLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQT 724 + K+ V E + ++ K H + +Q L + E +T Sbjct 505 FRYRMNDALRAVTKIAVREARTREL--RQELLKSEKLKRHFEENPAELQHLVRHDGELRT 562 Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 50/99 (51%), Gaps = 3/99 (3%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 ++G+ P + QAV + + PT +Q+++IPL L G DVL A+TGSGKT A+ +P++Q V Sbjct 47 DLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPILQAV- 105 Query 66 ETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 LK +Q + + F+ Sbjct 106 --LKRKQINPGATYISSLILVPTRELTVQVTKEVERFSA 142 >sp|A1DGF2|MRH4_NEOFI ATP-dependent RNA helicase mrh4, mitochondrial OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=mrh4 PE=3 SV=1 Length=631 Score = 189 bits (480), Expect = 4e-50, Method: Composition-based stats. Identities = 84/364 (23%), Positives = 146/364 (40%), Gaps = 37/364 (10%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVV 344 P+A+I+ P+ EL Q +K + K R +I + R + L +G+DI+V Sbjct 271 PRAIILVPTSELVAQVGVKVKALSHTV---KYRSGMISSNLTPRRIKNTLFHPDGIDILV 327 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD LL + ++ + ++ + ++I Sbjct 328 ATPHLLASIAKTEPYVLSRVSHLVLDEADSLLDRSFAPTTTEIISK-----AAPSLRKLI 382 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +CSAT+ + L K + ++P V VV + R L + + Sbjct 383 LCSATIP-RSLDNLLRKRYPDIKRLTTPNLHAIPRRVQLGVVDIEKDPYRGNRSLACADV 441 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK-IDCDNL- 522 A D G + + + KIL V + + D+ F R+K ID +L Sbjct 442 IWSIGKAGDAESEGPYASYVAPKTKKIL-----VFVNEREEADEVAQFLRSKGIDAQSLS 496 Query 523 --------EQYFIQQGGGPDKKGHQFSCVC---------LHGDRKPHERKQNLERFKKGD 565 E+ + P + + + + + + + Sbjct 497 RDSDARKQEEILAEFTEAPPPPTPDEILLAQKQRRHEDAIPFEMPQKTNQDSSR--RLAN 554 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TD+A+RGID V VI +P +++HR+GR+GR + G + LV + K Sbjct 555 TKVLVTTDLASRGIDTLAVKTVILYHVPHTTIDFIHRLGRLGRMGKRGRGVVLVGKKDRK 614 Query 626 VWYH 629 Sbjct 615 DVVK 618 Score = 57.4 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 23/86 (27%), Positives = 38/86 (44%), Gaps = 22/86 (26%) Query 1 MAAFSEMGVMPEIAQAVEEMDW-----LLPTDIQAESIPLILGGGDV------------- 42 + +F + ++P + ++ + PT IQ +IP +L Sbjct 140 ITSFDQFQLLPVVRNSISSQALPGLVDVTPTPIQRLAIPRLLEEPKTEKKPTKADDDEPQ 199 Query 43 ----LMAAETGSGKTGAFSIPVIQIV 64 L+AAETGSGKT A+ +PV+ V Sbjct 200 YDQYLLAAETGSGKTLAYLLPVVDAV 225 >sp|A4RMV8|ROK1_PYRO7 ATP-dependent RNA helicase ROK1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=ROK1 PE=3 SV=1 Length=775 Score = 191 bits (484), Expect = 5e-50, Method: Composition-based stats. Identities = 95/459 (21%), Positives = 159/459 (35%), Gaps = 86/459 (19%) Query 261 APDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 A +G + + G + +A +A++V P+RELA Q N ++ +R Sbjct 281 AINGVLKRRAEKGETGGDSSNDTKHALEAIVVAPTRELASQIANEGRKLA---MGTGVRV 337 Query 321 LLIIGGV-----------------------------AARDQLSVLENGV----------- 340 +L+ G+ + D+ Sbjct 338 VLMRKGMRVAAEEDSTEKKSEDQEEDVFESEDEDSLSEDDEEREKSEKPSKKPNKAPITK 397 Query 341 -DIVVGTPGRLDDLVSTG----KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 DI+V TP L + +S G K L +VR L+LDEAD LL Q + + + Sbjct 398 ADILVTTPMLLLNFLSKGTSTTKKRLPRVRSLILDEADVLLDQLFREQTMGI-----WSA 452 Query 396 SDGKRLQVIVCSATLHS-------FDVKKLSEKIMHFP-TWVDLKGEDSVPDTVHHVVVP 447 L+V SAT+ S +++ ++ P + + +D+ + H +V Sbjct 453 CRNPNLRVSFWSATMASNIETHILDNLRAQADDAPAPPLIRLVVGLKDTAVPNISHRLVY 512 Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 ++ +L H + T P +P Sbjct 513 TATESGKLLALRQLLHPASFSTTTSSTTTPEDETPLRPPF-------------------- 552 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 ++F +T L + + P G LH R + RF+ DV Sbjct 553 --LVFVQTIERATALHEEL--KYDIPAAAGGASRVAVLHSSMPESARAAVIRRFRAADVW 608 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATEKEKV 626 LI TDV ARG+D GV V+N +P YVHR GR GRA R G+A++ E Sbjct 609 VLITTDVLARGVDFAGVNGVVNYDVPGSAAAYVHRAGRTGRAGRKGGIAVTFYTKEDIPF 668 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 +V + E + + +S+ ++ Sbjct 669 VKNVANVIALSERQAGAGESATQKWLLDALPDVSKKDKK 707 Score = 65.2 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 29/147 (20%), Positives = 54/147 (37%), Gaps = 42/147 (29%) Query 3 AFSEMG----VMPEIAQAVEEMDWLLPTDIQAESIPLILG-------------------- 38 +FS++ + P +A + + + +PT++Q ++PL+L Sbjct 188 SFSQLRSAYRISPRLADNLAKGSYKVPTEVQLGALPLLLQPGFALSHEGDGVDDDGKGGD 247 Query 39 ------------GGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQE-----GKKGKTTI 81 G D L A TGSGKT +F +P I V + ++ E K + Sbjct 248 GEALAMLQGASAGVDFLAIAPTGSGKTLSFLLPAINGVLKRRAEKGETGGDSSNDTKHAL 307 Query 82 KTGAS-VLNKWQMNPYDRGSAFAIGSD 107 + + + G A+G+ Sbjct 308 EAIVVAPTRELASQIANEGRKLAMGTG 334 >sp|A5E572|DBP9_LODEL ATP-dependent RNA helicase DBP9 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=DBP9 PE=3 SV=1 Length=606 Score = 188 bits (477), Expect = 6e-50, Method: Composition-based stats. Identities = 97/550 (18%), Positives = 193/550 (35%), Gaps = 71/550 (13%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--------APKALIVEPS 295 E +AL + D S SG + N +++++ P+ Sbjct 41 ENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPIIQNIMVQGSQLGTQSVVLVPT 100 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS 355 REL+ Q ++Q K+ +N K+ L + + + S+L N +I++ TP +L + Sbjct 101 RELSNQVYQFMEQLIKFSNN-KIGILNLSSNYSDQVLKSLLINKPEIIISTPSKLIQTLE 159 Query 356 ----TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 ++LS V+ L +DE D +LS GY D + ++ + +P K LQ + SAT++ Sbjct 160 AHEGKDIIDLSTVKNLTIDEVDLILSFGYKDDLQKLESYLP----VKKNLQTFLMSATVN 215 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP-KTDRLWERLGKSHIRTDDVH 470 D+ +L K P + L + S + + L + K ++ Sbjct 216 D-DLNELKAKFCTKPAILKLDDDQSNNNKLVQFYAKTTEFDKFLLSYVIFKLNLIKGKTI 274 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK----IDCDNLEQYF 526 N +++ E I ++ F + I D++ Sbjct 275 VFVNNIDRGYRLKLFLEQFGIRCCILNSELPINSRLHIVEEFNKNVYHLLIATDDISVEK 334 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKP--------------------HERKQNLERFKKGDV 566 + + + ++ + ++N + K D Sbjct 335 EEVDEVDEGEEEHEDAADADEKKQQNNNNNNNNHNNNNKEHKEVLKKNEKNKKHSSKKDK 394 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE---- 622 + + +RG+D V V+N LP ++YVHR+GR RA + G+A+S V E Sbjct 395 EYGV-----SRGVDFRNVACVLNFDLPTTSKSYVHRVGRTARAGKSGMALSFVIPEKEVG 449 Query 623 ------------KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 EKV + + K + + + + + I Sbjct 450 KHKTASLRSAKKDEKVLNRIVKQQQKNGFEIKPYQFDMKQVEGFRYRADDAFRAVTQTAI 509 Query 671 SQVE-PDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQE------LAALEKEAQ 723 + ++K + + + Q+ S + ++ VQ L + A+ Sbjct 510 REARVKELKNELINSEKLKRFFQENPRDLASLRHDKELHPARVQAHLKRTPQYLLPESAR 569 Query 724 TSFLHLGYLP 733 +LG++P Sbjct 570 LDVKNLGFIP 579 Score = 98.3 bits (243), Expect = 5e-20, Method: Composition-based stats. Identities = 29/109 (27%), Positives = 56/109 (51%), Gaps = 5/109 (5%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPV 60 + + + P + QA++++ + PT IQ+ +IPL L D++ A TGSGKT A++IP+ Sbjct 20 TTWDSLNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPI 79 Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL 109 IQ + ++ Q G ++ + L+ ++ F+ G+ Sbjct 80 IQNIM--VQGSQLG--TQSVVLVPTRELSNQVYQFMEQLIKFSNNKIGI 124 >sp|Q1E306|ROK1_COCIM ATP-dependent RNA helicase ROK1 OS=Coccidioides immitis (strain RS) OX=246410 GN=ROK1 PE=3 SV=1 Length=730 Score = 189 bits (481), Expect = 8e-50, Method: Composition-based stats. Identities = 102/573 (18%), Positives = 193/573 (34%), Gaps = 98/573 (17%) Query 204 KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKF----PPKDGFVALS 259 F K ++ + ++ +Q ++ L G + Sbjct 173 SFDKLRTRYHISRRLSDNIASQGYTVPTEVQLGSLPLLLGNAPAPNERTADDESLRSQSE 232 Query 260 KAPDGYIVKSQHSGNAQVTQTKFL------------PNAPKALIVEPSRELAEQTLNNIK 307 + PD +V SG + A++V P++EL Q +N + Sbjct 233 REPDLLVVAPTGSGKTLSFMIPLINKIMKHHHDNPGLKEILAIVVAPTKELVAQIVNEGR 292 Query 308 QFKKYIDNPKLRELLIIGGVAARDQL----SVLEN------------------------- 338 + ++ + G+ ++ LE Sbjct 293 KL---TAGTGVKVSAVRKGMRIVEERGQETRSLEEENDGDDSTASSDEEIHSSEGEKSKD 349 Query 339 ----GVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 DI+V TP L + +S G L V+ LVLDEAD LL + + + Sbjct 350 IPLTKSDILVCTPLVLANALSDGGKRDVAPLPSVQKLVLDEADVLLDPLFREQTLSIWRA 409 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 +L+V + SAT+ S ++++L++ + +L G + VV + Sbjct 410 C-----THPQLRVGLWSATMGS-NIEELTKSTIK--ERQELLGLKDESSLIRLVVGLKDT 461 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 + +L + + ++ L + + H + Sbjct 462 AIPNISHKLVYAATEQGKLLG-----------------LRQLLHPTSTSSSTTHLRPPFL 504 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 IF +T L + + + LH + +R + F+KG++ LI Sbjct 505 IFTQTIARAIALHSELMYDIPAEAGGSSRIAV--LHSELSDSKRSDVMAGFRKGEIWVLI 562 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATEKEKVWYH 629 TD+ ARG+D G+ V+N +P+ +YVHR+GR GRA R G+A++ E + Sbjct 563 TTDLLARGVDFRGINGVVNYDIPNSSASYVHRVGRTGRAGREGGVAVTFYTKEDIPYVKN 622 Query 630 VCSSRGKGCYNTRLKEDGGCTIWY---------NEMQLLSE--IEEHLNCTISQVEPDIK 678 + + +E W N+ + L + ++ TIS K Sbjct 623 IANVISASENLRGTEEGERIPKWLLDALPSLSKNDKKDLKKYGVKARRPSTISDKTTSKK 682 Query 679 VPV---DEFDGKVTYGQKRAAGGGSYKGHVDIL 708 + FD ++ +K A G + + L Sbjct 683 TRISTKSGFDRRMDNKRKGAIKGSQRRKAREQL 715 Score = 69.0 bits (167), Expect = 9e-11, Method: Composition-based stats. Identities = 26/132 (20%), Positives = 52/132 (39%), Gaps = 28/132 (21%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGG----------------- 39 + +F ++ + ++ + + +PT++Q S+PL+LG Sbjct 171 LTSFDKLRTRYHISRRLSDNIASQGYTVPTEVQLGSLPLLLGNAPAPNERTADDESLRSQ 230 Query 40 ----GDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNP 95 D+L+ A TGSGKT +F IP+I + + D K+ + + + Sbjct 231 SEREPDLLVVAPTGSGKTLSFMIPLINKIMKHHHDNPGLKE---ILAIVVAPTKELVAQI 287 Query 96 YDRGSAFAIGSD 107 + G G+ Sbjct 288 VNEGRKLTAGTG 299 >sp|A2QAB5|ROK1_ASPNC ATP-dependent RNA helicase rok1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=rok1 PE=3 SV=2 Length=729 Score = 189 bits (479), Expect = 2e-49, Method: Composition-based stats. Identities = 99/558 (18%), Positives = 186/558 (33%), Gaps = 88/558 (16%) Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVA 257 + V F + ++ + ++ Q ++ L G++ P+ Sbjct 174 FPEPLVSFKQLRTKYNISRRLAENIAEQGFTVPTEVQLGSLPLLLGDQS---VPQKSGTE 230 Query 258 LSKAPDGYIVKSQHSGNAQVTQT------------KFLPNAPKALIVEPSRELAEQTLNN 305 S PD +V SG K ++++ P++ELA Q +N Sbjct 231 KSTEPDLLVVAPTGSGKTLSFMIPVINKIVRHHHEKPEERGILSVVIAPTKELASQIVNE 290 Query 306 IKQFKKYIDNPKLRELLIIGGV------------------------AARDQLSVLEN--- 338 ++ ++ L+ G+ + D+ + +N Sbjct 291 GRKLA---LGTGVKITLMKKGMRVVERDDEDDSKDVLDEDDSESLGSEDDEKATAKNSKG 347 Query 339 -----GVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHN 389 DI+V TP L + +S + L VR +VLDEAD LL + D + Sbjct 348 KAPVTKSDILVTTPLLLVNALSANRTKPLATLPLVRNVVLDEADVLLDPLFRDQTLDIWR 407 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + L+ + SAT+ S +V+ L++ + D E + VV + Sbjct 408 -----SCTHPELRASLWSATMGS-NVEDLAKSTIK--ERKDTLSETKSYPLLRLVVGLKD 459 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + +L + + A + Sbjct 460 SAIPNIKHKLVYAATEQGKLLGLRQLLHPAAASSTDIRLRPPF----------------- 502 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 +IF +T L P + G LH + +R + +++F+KG++ L Sbjct 503 LIFTQTIPRAVALHSELRYD--IPPEAGGSSRIAVLHSELSDGQRSEIMKQFRKGEIWIL 560 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATEKEKVWY 628 + TD+ ARG+D G+ V+N +P+ YVHR+GR GRA R G+A++ E Sbjct 561 VTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGIAVTYYTKEDIPYVK 620 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKV 688 + + E+ W L + L+ + V + G Sbjct 621 SIANVIDVSEKLRGTDEEKSVQKW------LLDALPDLSKKKKEELKKHGVKARQTQGTK 674 Query 689 TYGQKRAAGGGSYKGHVD 706 + R + Y+ + Sbjct 675 DDKKTRISTKSGYERRQE 692 Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats. Identities = 29/123 (24%), Positives = 55/123 (45%), Gaps = 21/123 (17%) Query 3 AFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG--------------DVLM 44 +F ++ + +A+ + E + +PT++Q S+PL+LG D+L+ Sbjct 180 SFKQLRTKYNISRRLAENIAEQGFTVPTEVQLGSLPLLLGDQSVPQKSGTEKSTEPDLLV 239 Query 45 AAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 A TGSGKT +F IPVI + ++ E + + + + + G A+ Sbjct 240 VAPTGSGKTLSFMIPVINKIVRHHHEKPEER---GILSVVIAPTKELASQIVNEGRKLAL 296 Query 105 GSD 107 G+ Sbjct 297 GTG 299 >sp|Q4X1X0|MRH4_ASPFU ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=mrh4 PE=3 SV=1 Length=631 Score = 187 bits (474), Expect = 3e-49, Method: Composition-based stats. Identities = 84/364 (23%), Positives = 145/364 (40%), Gaps = 37/364 (10%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVV 344 P+A+I+ P+ EL Q +K + K R +I R + L +G+DI+V Sbjct 271 PRAIILVPTSELVAQVGVKVKALSHTV---KYRSGMISSNFTPRRIKNTLFHPDGIDILV 327 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD LL + ++ + ++ + ++I Sbjct 328 ATPHLLASIAKTEPYVLSRVSHLVLDEADSLLDRSFAPTTTEIISK-----AAPSLRKLI 382 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +CSAT+ + L K + ++P V VV + R L + + Sbjct 383 LCSATIP-RSLDNLLRKRYPDIKRLTTPNLHAIPRRVQLGVVDIEKDPYRGNRSLACADV 441 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK-IDCDNL- 522 A D G + + + KIL V + + D+ F R+K ID +L Sbjct 442 IWSIGKAGDAESEGPYASYVAPKTKKIL-----VFVNEREEADEVAQFLRSKGIDAQSLS 496 Query 523 --------EQYFIQQGGGPDKKGHQFSCVC---------LHGDRKPHERKQNLERFKKGD 565 E+ + P + + + + + + + Sbjct 497 RDSDARKQEEILAEFTEAPPPPSPDEILLAQKKRRYEDAIPFEMPEKANQGSSR--RLAN 554 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 + L+ TD+A+RGID V VI +P +++HR+GR+GR + G + LV + K Sbjct 555 TKVLVTTDLASRGIDTLAVKTVILYHVPHTTIDFIHRLGRLGRMGKRGRGVVLVGKKDRK 614 Query 626 VWYH 629 Sbjct 615 DVVK 618 Score = 57.4 bits (137), Expect = 3e-07, Method: Composition-based stats. Identities = 23/86 (27%), Positives = 38/86 (44%), Gaps = 22/86 (26%) Query 1 MAAFSEMGVMPEIAQAVEEMDW-----LLPTDIQAESIPLILGGGDV------------- 42 + +F + ++P + ++ + PT IQ +IP +L Sbjct 140 ITSFDQFQLLPVVRNSISSQALPGLVDVTPTPIQRLAIPRLLEEPKTEKKPTKADDDEPR 199 Query 43 ----LMAAETGSGKTGAFSIPVIQIV 64 L+AAETGSGKT A+ +PV+ V Sbjct 200 YDQYLLAAETGSGKTLAYLLPVVDAV 225 >sp|A1CSR1|MRH4_ASPCL ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=mrh4 PE=3 SV=2 Length=632 Score = 184 bits (468), Expect = 2e-48, Method: Composition-based stats. Identities = 81/385 (21%), Positives = 141/385 (37%), Gaps = 78/385 (20%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVV 344 P+A+I+ P+ EL Q +K + K R +I + R + L +G+DI+V Sbjct 271 PRAIILVPTSELVAQVGVKVKALSHTV---KYRSGMISSNLTPRRIKNTLFHPDGIDILV 327 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD LL + ++ + +++ +I Sbjct 328 ATPHLLASIAKTEPYLLSRVSHLVLDEADSLLDRSFAPTTTEIISKVAPSLQK-----LI 382 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +CSAT+ + L K + ++P V VV + R L + + Sbjct 383 LCSATIP-RSLDNLLRKRYPDIKRLTTPNLHAIPRRVQLGVVDIEKDPYRGNRSLACADV 441 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 A D+ G S + E K + ++F + + D + Q Sbjct 442 IWSIGKAGDSEVSGPYSSFL------------------EPKTKKILVFVNEREEADEVAQ 483 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG-------------------- 564 + +G L D ++++ L F + Sbjct 484 FLQSKG---------IDAHSLSRDSSARKQEEILAEFTEAPPPPSPDEIMLAQKQRRHED 534 Query 565 --------------------DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 + + L+ TD+ +RGID V VI +P +++HR+G Sbjct 535 PIPFEMPKRTNSGGSTRRLPNTKVLVTTDLTSRGIDTLAVKTVILYHVPHTTIDFIHRLG 594 Query 605 RVGRAERMGLAISLVATEKEKVWYH 629 R+GR + G + LV + K Sbjct 595 RLGRMGKRGRGVVLVGKKDRKDVVK 619 Score = 57.1 bits (136), Expect = 4e-07, Method: Composition-based stats. Identities = 23/86 (27%), Positives = 38/86 (44%), Gaps = 22/86 (26%) Query 1 MAAFSEMGVMPEIAQAVEEMDW-----LLPTDIQAESIPLILGGG--------------- 40 + +F + ++P + ++ + PT IQ +IP +L Sbjct 140 ITSFDQFPLLPVVRNSIVSQALPGLMEVTPTPIQRLAIPKLLEESKPDKKPVKTDDDEPH 199 Query 41 --DVLMAAETGSGKTGAFSIPVIQIV 64 L+AAETGSGKT A+ +PV+ V Sbjct 200 YDQFLLAAETGSGKTLAYLLPVVDAV 225 >sp|Q0C9E8|MRH4_ASPTN ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=mrh4 PE=3 SV=2 Length=631 Score = 183 bits (465), Expect = 3e-48, Method: Composition-based stats. Identities = 96/366 (26%), Positives = 148/366 (40%), Gaps = 43/366 (12%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+ +I+ P+ EL Q +K I K R +I + R + L N G+DI+V Sbjct 273 PRVIILVPTAELVAQVGAKVKTLSHTI---KYRSGMISSNLTPRRIKNTLFNPDGIDILV 329 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD LL + + + + + G ++I Sbjct 330 TTPHLLASIAKTEPYVLSRVSHLVLDEADSLLDRSFQPITTEIIEK-----TSGSLQKLI 384 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +CSAT+ L +K + ++P V VV + R L + + Sbjct 385 LCSATIPRSLDNFLRKKY-PDIQRLTTPNLHAIPRRVQLGVVDIQKDPYRGNRNLACADV 443 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK-IDCDNLE 523 A D+ G + KIL V + + D+ F R+K ID +L Sbjct 444 IWSIGKAGDSEPAGPFASYQGPSVKKIL-----VFVNEREEADEVAQFLRSKGIDAHSLS 498 Query 524 Q------------YFIQQGGGPD--------KKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + F + G P KKG Q + KPHE + Sbjct 499 RDSSARRQEEILAEFTEAGAPPSSEEIMLAQKKGRQDDAIPFEAPSKPHEPHKLP----- 553 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 + + L+ TD+A+RGID V VI +P +++HR+GR+GR + G I LV + Sbjct 554 -NTKVLVTTDIASRGIDTLAVKTVILYHVPHTTIDFIHRLGRLGRMNKRGRGIVLVGKKD 612 Query 624 EKVWYH 629 K Sbjct 613 RKDVVK 618 Score = 62.1 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 24/90 (27%), Positives = 41/90 (46%), Gaps = 22/90 (24%) Query 1 MAAFSEMGVMPEIAQAVEE-----MDWLLPTDIQAESIPLILG--GGD------------ 41 + +F + ++P + ++ + + PT IQ +IP +L D Sbjct 142 ITSFDQFPLLPVVRHSIFSQALPGLHDVTPTPIQRVAIPRLLDDTNKDKKPKKRAEGEPE 201 Query 42 ---VLMAAETGSGKTGAFSIPVIQIVYETL 68 L+AAETGSGKT A+ IP++ V + Sbjct 202 YDQYLLAAETGSGKTLAYLIPLVNTVKQQE 231 >sp|Q5AZA6|DBP9_EMENI ATP-dependent RNA helicase dbp9 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dbp9 PE=3 SV=1 Length=610 Score = 183 bits (463), Expect = 5e-48, Method: Composition-based stats. Identities = 86/411 (21%), Positives = 144/411 (35%), Gaps = 34/411 (8%) Query 206 SKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY 265 ++ + L L + + + ++ + +A +K G Sbjct 27 DEDFETLNLDPRLRQALVKEKFSKPTPVQAKAIPLAL--------EGKDILARAKTGSGK 78 Query 266 IVKSQHSGNAQVTQTKFLPN---APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 + Q K + A LI+ P+RELAEQ I F + +R + Sbjct 79 TAAYVLPILQTILQKKAIDPSMKATTGLILVPTRELAEQVQKVITTFAAFC-GKDVRSVN 137 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSD 382 + V+ Q ++L + DIVV TP R+ + T L+L + LV+DEAD +LS GY D Sbjct 138 LTQKVSDAVQKAMLADYPDIVVSTPARVIANLGTSALSLENLTHLVIDEADLVLSYGYED 197 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 IN + IP + +Q + SATL + +V L P + L+ +D V Sbjct 198 DINALSKAIP------RGVQTFLMSATL-TAEVDTLKGLFCRSPVILKLEDKDDHGAGVS 250 Query 443 HVVVPVNPKTDRLWERLGKSHIRTD-----DVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 VV L + V D + E + IL E Sbjct 251 QFVVKCAEDEKFLLTYVIFKLQLIKGKVIIFVGDIDRSYRLKLFLEQFGIKSCILNSELP 310 Query 498 VRAIKE--HKMDQA---IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 V + + ++ II + + + + + + Sbjct 311 VNSRIHVVEEFNKGVYDIIIAADEQEVLGVSKSRKSKDATEGDDELLSDEDEETSAKAAS 370 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 R + + + I +RGID V V+N LP ++Y HRI Sbjct 371 TRTDKRRKLSSKEKDYGI-----SRGIDFQNVACVLNFDLPTSSKSYTHRI 416 Score = 102 bits (254), Expect = 3e-21, Method: Composition-based stats. Identities = 30/101 (30%), Positives = 49/101 (49%), Gaps = 3/101 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +QA++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 30 FETLNLDPRLRQALVKEKFSKPTPVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQT 89 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + K K T + + FA Sbjct 90 ILQK-KAIDPSMK--ATTGLILVPTRELAEQVQKVITTFAA 127 >sp|Q7SBR1|MRH4_NEUCR ATP-dependent RNA helicase mrh4, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-15 PE=3 SV=1 Length=625 Score = 183 bits (463), Expect = 6e-48, Method: Composition-based stats. Identities = 90/464 (19%), Positives = 167/464 (36%), Gaps = 87/464 (19%) Query 209 GKDLGLAFEIPPHMKNQ--ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 G+ +G P + L A L + ++ + Sbjct 185 GQPMGRKPRRPKSDNGREEFLLAAETGSGKTLAYLVPAVNAIKKGDADDELVASYNERLA 244 Query 267 VKSQHSGNAQVTQ--TKFLPN----APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 + + G A V++ KF P+ P+ +++ P+ EL +Q + K+ Y K + Sbjct 245 AEKERRGGAPVSEWIEKFEPHPNTARPRVVVLVPTAELVDQVTSVAKKLAHY---TKFKV 301 Query 321 LLIIGGVAARDQLSVLEN--GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 + ++ L + GVD++V TP L + + LS+V LV+DEAD LL + Sbjct 302 RPLSASISPLRNQRNLYSPIGVDMIVSTPHLLATIAKSDPNVLSRVSHLVIDEADSLLDR 361 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 +S + + + Q+I+CSAT+ + E+ + + ++P Sbjct 362 SFSGDTTSIVD-----RAMPSLKQLILCSATIPRR-LDTYMEEQFPYINRITTPNLHAIP 415 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 V V+ V+ R N + A + +WS + K E Sbjct 416 RRVQLGVIDVSKDPYR-------------------NNKMLACADAIWSIGKEAAKHEGPK 456 Query 499 RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 I + + ++F + + Y + +G + LH D + H + + L Sbjct 457 SEID---VKRIMVFVNERETTQQVADYLVSKG---------IDAIALHRDTEEHRKSEML 504 Query 559 ERFKKGD-------------------------------------VRFLICTDVAARGIDI 581 F + + ++ TD+A+RGID Sbjct 505 ASFTSNEPMKISRPADDDVAAAAAEGGKAGGAVSSSPTRRHLPNTKVIVATDLASRGIDT 564 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 V YV+ +P +++HR+GR GR R G I LV + + Sbjct 565 LAVRYVVLYDVPHTTIDFIHRLGRAGRMNRRGRGIVLVGKDDRR 608 Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 51/116 (44%), Gaps = 25/116 (22%) Query 1 MAAFSEMGVMPEIAQAVEEMDWL-----LPTDIQAESIPLIL--------------GGGD 41 + AF + ++P + +A+ + PT +Q +IP +L G + Sbjct 143 IQAFDQFDLLPVVKEAIAQEALKGMTEIKPTPVQRLAIPALLGQPMGRKPRRPKSDNGRE 202 Query 42 -VLMAAETGSGKTGAFSIPVIQIVYETLKDQQ-----EGKKGKTTIKTGASVLNKW 91 L+AAETGSGKT A+ +P + + + D + + + G + +++W Sbjct 203 EFLLAAETGSGKTLAYLVPAVNAIKKGDADDELVASYNERLAAEKERRGGAPVSEW 258 >sp|A2QZ71|MRH4_ASPNC ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=mrh4 PE=3 SV=2 Length=633 Score = 182 bits (462), Expect = 9e-48, Method: Composition-based stats. Identities = 83/385 (22%), Positives = 137/385 (36%), Gaps = 78/385 (20%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+ +I+ P+ EL Q +K + K R +I + R S+L N G+DI+V Sbjct 272 PRVIILVPTSELVAQVGAKVKALSHTV---KYRSGMISSNLTPRRIKSILFNPSGIDILV 328 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD L+ + + + + S ++I Sbjct 329 ATPHLLASIAKTDPYVLSRVSHLVLDEADSLMDRSFLPTTTEIIEK-----SASSLHKLI 383 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +CSAT+ + L K + ++P V VV + R L + + Sbjct 384 LCSATIP-RSLDNLLRKRYPDIRRLTTPNLHAIPRRVQLGVVDIQRDPYRGNRSLACADV 442 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 A D + K+ + ++F + + D + Q Sbjct 443 IWSIGKAGDTEPTHPFLAQAGP------------------KVKKILVFVNEREEADEVAQ 484 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG-------------------- 564 + +G RK E LE F + Sbjct 485 FLRSKGIDAQSFSRD------SSSRKQEE---LLEEFTESPIPPTAEEIMLAKNKRRQDN 535 Query 565 --------------------DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 + + L+ TD+A+RGID V VI +P +++HR+G Sbjct 536 SIPFVFPEQQNKPGAERGLPNTKVLVTTDIASRGIDTIAVKTVILYHVPHNTIDFIHRLG 595 Query 605 RVGRAERMGLAISLVATEKEKVWYH 629 R+GR + G A+ LV + K Sbjct 596 RLGRMGKRGRAVVLVGKKDRKDVVK 620 Score = 67.5 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 29/98 (30%), Positives = 48/98 (49%), Gaps = 22/98 (22%) Query 1 MAAFSEMGVMPEIA-----QAVEEMDWLLPTDIQAESIPLILG-------GGDV------ 42 +++F + ++P + QA+ ++PT IQ +IP +L DV Sbjct 141 VSSFDQFPLLPVVRHSISSQALSRTGDIVPTPIQRLAIPQLLKDPIPKRTSKDVSDHEPN 200 Query 43 ----LMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKK 76 L+AAETGSGKT A+ IP+I + + +E +K Sbjct 201 FEQYLLAAETGSGKTLAYLIPLIDSLKRMEVEDKEFEK 238 >sp|Q2TZH2|MRH4_ASPOR ATP-dependent RNA helicase mrh4, mitochondrial OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=mrh4 PE=3 SV=1 Length=628 Score = 181 bits (460), Expect = 2e-47, Method: Composition-based stats. Identities = 79/385 (21%), Positives = 140/385 (36%), Gaps = 78/385 (20%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+ +I+ P+ EL Q +K + K R +I + R S L N G+DI+V Sbjct 267 PRVIILVPTSELVAQVGVKVKALAHTV---KYRSGMISSNLTPRRIKSTLFNPDGIDILV 323 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD L+ + + + +++ ++I Sbjct 324 STPHLLASIAKTEPYVLSRVSHLVLDEADSLMDRSFLPTTTEIISKV-----APSLRKLI 378 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +CSAT+ + L K + ++P V VV + + R L + + Sbjct 379 LCSATIP-RSLDNLLRKRYPDIKRLTTPNLHAIPRRVQLGVVDIQKEPYRGNRNLACADV 437 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 A D+ + + + + ++F + + D + Q Sbjct 438 IWSIGKAGDSEPSEPFASYVGP------------------NIKKILVFVNEREEADEVAQ 479 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG-------------------- 564 + +G L D ++++ L F + Sbjct 480 FLRSKG---------IDAQSLSRDSSARKQEEILAEFTESAPPPSPEEIMLAQKKRRQED 530 Query 565 --------------------DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 + + L+ TD+A+RGID V VI +P +++HR+G Sbjct 531 AIPFELPENHNKPENVRRLANTKVLVTTDLASRGIDTLPVKTVILYHVPHTTIDFIHRLG 590 Query 605 RVGRAERMGLAISLVATEKEKVWYH 629 R+GR + G I LV + K Sbjct 591 RLGRMNKRGRGIVLVGKKDRKDVVK 615 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 22/86 (26%), Positives = 38/86 (44%), Gaps = 22/86 (26%) Query 1 MAAFSEMGVMPEIAQAVEEMDW-----LLPTDIQAESIPLILG----GG----------- 40 + +F ++P + ++ + PT IQ +IP ++ G Sbjct 136 ITSFDHFPLLPVVRHSIFSQALPGLVDVTPTPIQRLAIPKLMEDSPDGKRGTKLEDGDPQ 195 Query 41 --DVLMAAETGSGKTGAFSIPVIQIV 64 L+AAETGSGKT A+ +P++ V Sbjct 196 YDQYLLAAETGSGKTLAYLLPLVDAV 221 >sp|Q2UQW3|ROK1_ASPOR ATP-dependent RNA helicase rok1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rok1 PE=3 SV=1 Length=725 Score = 183 bits (463), Expect = 2e-47, Method: Composition-based stats. Identities = 89/494 (18%), Positives = 174/494 (35%), Gaps = 73/494 (15%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFG-----EEEFKFPPKDGFVA 257 V F + ++ + ++ Q ++ L G + + + P + + Sbjct 175 VSFKELRTQYKISRRLAENITEQGFTVPTEVQLGTLPLLLGDRTIGQSKTEEPVEPDLLV 234 Query 258 LSKAPDGYIVKSQHSGNAQVTQ---TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYID 314 ++ G + ++ + + A++V P++ELA Q +N ++ + Sbjct 235 VAPTGSGKTLSFLIPVINKIVRHHHGQQEERGIFAVVVAPTKELASQIVNEGRKL---VS 291 Query 315 NPKLRELLIIGGVAAR---------------------------DQLSVLENGV---DIVV 344 ++ L+ G+ ++ S + V DI+V Sbjct 292 GTGVKITLMKKGMQVVEREDDDEDVLDEGSSESSESEDDEKTTEKKSKGKAPVTKSDILV 351 Query 345 GTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 TP +L + +S K L VR +VLDEAD LL + + + Sbjct 352 TTPLQLVNALSANKTKPMATLPLVRNIVLDEADVLLDPLFREQTLDIWRAC-----THPE 406 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 L+ + SAT+ S ++ L++ + + + S + + V D + Sbjct 407 LRASLWSATMGS-SIEDLAKS------TIKERKDASSLTKSYPLYRLVVGLKDSAIPNIQ 459 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + K P + + L+ + +IF +T Sbjct 460 HKLVYAATEQGKLLGLRQLLHPAAAAASDIRLRPPF-------------LIFTQTIPRAV 506 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L P + G LH D +R + ++ F+KG++ L+ TD+ ARGID Sbjct 507 ALHSELRYD--IPPEAGGSSRIAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGID 564 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATEKEKVWYHVCSSRGKGCY 639 G+ V+N +P+ YVHR+GR GRA R G+A++ E + + Sbjct 565 FRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGVAVTYYTKEDIPYVKSIANVIDVSEK 624 Query 640 NTRLKEDGGCTIWY 653 + + W Sbjct 625 LRGTEGEKSVQKWL 638 Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 30/122 (25%), Positives = 52/122 (43%), Gaps = 20/122 (16%) Query 3 AFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG-------------DVLMA 45 +F E+ + +A+ + E + +PT++Q ++PL+LG D+L+ Sbjct 176 SFKELRTQYKISRRLAENITEQGFTVPTEVQLGTLPLLLGDRTIGQSKTEEPVEPDLLVV 235 Query 46 AETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 A TGSGKT +F IPVI + QQE + + + + G G Sbjct 236 APTGSGKTLSFLIPVINKIVRHHHGQQEER---GIFAVVVAPTKELASQIVNEGRKLVSG 292 Query 106 SD 107 + Sbjct 293 TG 294 >sp|Q5AZY1|MRH4_EMENI ATP-dependent RNA helicase mrh4, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=mrh4 PE=3 SV=1 Length=630 Score = 181 bits (458), Expect = 3e-47, Method: Composition-based stats. Identities = 86/376 (23%), Positives = 143/376 (38%), Gaps = 61/376 (16%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+A+I+ P+ EL Q +K F + K R +I + R S L N G+DI+V Sbjct 272 PRAIILVPTAELVAQVGAKLKAFAHTV---KFRSGIISSNLTPRRIKSTLFNPAGIDILV 328 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LVLDEAD L+ + + + I + ++L I Sbjct 329 STPHLLASIAKTDPYVLSRVSHLVLDEADSLMDRSFLPISTEV---ISKAAPSLQKL--I 383 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 CSAT+ +L K+ + ++P V VV + R L + + Sbjct 384 FCSATIPRSLDSQL-RKLYPDIWRLTTPNLHAIPRRVQLGVVDIQKDPYRGNRNLACADV 442 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 +WS + A E K + ++F + + D + Q Sbjct 443 -------------------IWSIGKSGAGSDEAGSPWSEPKTKKILVFVNEREEADEVAQ 483 Query 525 YFIQQGGGPDKKGHQF-------------------SCVCLHGDRKPHERKQNLERF---- 561 + +G + + RK +R+ F Sbjct 484 FLKSKGIDAHSFNRDSGTRKQEEILAEFTEPAAVPTAEEILLARKQQQRENINIPFVLPE 543 Query 562 --------KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMG 613 + V+ L+ TD+A+RGID + VI +P +++HR+GR+GR + G Sbjct 544 RTNRDTERRLDGVKVLVTTDIASRGIDTLALKTVILYHVPHTTIDFIHRLGRLGRMGKRG 603 Query 614 LAISLVATEKEKVWYH 629 A+ LV + K Sbjct 604 RAVVLVGKKDRKDVVK 619 Score = 57.8 bits (138), Expect = 3e-07, Method: Composition-based stats. Identities = 25/90 (28%), Positives = 38/90 (42%), Gaps = 22/90 (24%) Query 1 MAAFSEMGVMPEIAQAVEEMDW-----LLPTDIQAESIPLIL-------GGGDV------ 42 + +F ++P + ++ +PT IQ +IP +L V Sbjct 141 ITSFDAFTLLPIVRNSIFSQALPGIADAVPTPIQRVAIPRLLEDAPAKKQAKKVDDDEPQ 200 Query 43 ----LMAAETGSGKTGAFSIPVIQIVYETL 68 L+AAETGSGKT A+ IPVI + Sbjct 201 YEQYLLAAETGSGKTLAYLIPVIDAIKRQE 230 >sp|Q4IPI1|ROK1_GIBZE ATP-dependent RNA helicase ROK1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=ROK1 PE=3 SV=1 Length=693 Score = 181 bits (460), Expect = 3e-47, Method: Composition-based stats. Identities = 105/529 (20%), Positives = 173/529 (33%), Gaps = 74/529 (14%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG-----FVALSKAPDGYIV 267 GL+ ++ ++ Q ++ L + F+A++ G + Sbjct 165 GLSDKVADNLVFQGYRVPTEVQMGSLPLLVHPQAALKDEDGLDGGVDFLAIAPTGSGKTI 224 Query 268 KSQHSGNAQVTQTKFLPN-----APKALIVEPSRELAEQTLNNIKQFKKYID----NPKL 318 + + + N +A+IV P+REL Q ++ ++ K + K Sbjct 225 SFLIPAINNILRRRSEENTGNIHELEAVIVAPTRELVHQIVSEGQKLCKGTGLKVVSMKK 284 Query 319 RELLIIGGVAARDQLSVLENG----------------------VDIVVGTPGRLDDLVST 356 L V + S E DI+V TP L +++ Sbjct 285 HTHLSADQVDMAEDSSEDEEDKESESEDDDKKPSDDKPKQITTPDILVTTPFLLFKFLTS 344 Query 357 GKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS 412 G + L VR L+LDEAD LL + R L+V SAT+ S Sbjct 345 GPPSTQKVLPTVRDLILDEADVLLDPLF-----RDATMADWTACTNTNLRVSFWSATMGS 399 Query 413 FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAK 472 ++EK+ +D+ + V V V +L + Sbjct 400 NIESMVTEKLTSRAQSLDITPKPFVRLVVGLKDTAVPNIAHKLIYTASEQGKLLALRQLL 459 Query 473 DNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG 532 T + P + ++F +T L + Q Sbjct 460 HPTASDDSGPPLRPPF---------------------LVFTQTIDRATALHEEL--QYDI 496 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 P + G LH R + +F+ GD+ LI TDV ARG+D GV V+N + Sbjct 497 PLEAGGAARIAALHSGLTDSARSSIMRKFRAGDIWILITTDVLARGVDFAGVNGVVNYDV 556 Query 593 PDEKQNYVHRIGRVGRAERM-GLAISLVATEK---EKVWYHVCSSRGKGCYNTRLKEDGG 648 P YVHR GR GRA R G+A++ E K+ +V + K T ++ G Sbjct 557 PGSSAGYVHRAGRTGRAGREGGIAVTFYTKEDIPFVKMVANVIAVSEKQAGKT--GDEAG 614 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAG 697 W + + E + K Y ++R Sbjct 615 VQKWLLDALPNVRKADRKKLKERGNEARRSGVKSKISSKSGYERRRENN 663 Score = 72.5 bits (176), Expect = 8e-12, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 47/122 (39%), Gaps = 18/122 (15%) Query 3 AFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILG-------------GGDVLMA 45 +F E+ G+ ++A + + +PT++Q S+PL++ G D L Sbjct 156 SFGELRNAYGLSDKVADNLVFQGYRVPTEVQMGSLPLLVHPQAALKDEDGLDGGVDFLAI 215 Query 46 AETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 A TGSGKT +F IP I + ++ G + + G G Sbjct 216 APTGSGKTISFLIPAINNILRRRSEENTGNI-HELEAVIVAPTRELVHQIVSEGQKLCKG 274 Query 106 SD 107 + Sbjct 275 TG 276 >sp|Q5BET6|ROK1_EMENI ATP-dependent RNA helicase rok1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rok1 PE=3 SV=1 Length=742 Score = 182 bits (462), Expect = 4e-47, Method: Composition-based stats. Identities = 98/498 (20%), Positives = 164/498 (33%), Gaps = 79/498 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 V F + ++ + ++ Q ++ L G D A P Sbjct 185 VSFKELRSKYKISRRLAENIAEQGFTVPTEVQLGSLPLLLGNSAVPGGSSDSTSA--TEP 242 Query 263 DGYIVKSQHSGNA------------QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFK 310 D +V SG + T A++V P++ELA Q +N ++ Sbjct 243 DLLVVAPTGSGKTLSFMIPVINKIVRHHHTHPEERGIFAVVVAPTKELASQIVNEGRKLA 302 Query 311 KYIDNPKLRELLIIGGVAA----RDQLSVL--------------------ENGV------ 340 ++ L+ G+ + VL G Sbjct 303 ---LGTGVKVTLMKKGMRVVERENEDEDVLDESNSESSESESDERTPNNKNKGPVPITKS 359 Query 341 DIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 DI+V TP +L + +S K L VR LVLDEAD LL + D + + Sbjct 360 DILVSTPLQLVNALSDNKTKPLATLPLVRNLVLDEADVLLDPLFRDQTLDIWR-----SC 414 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 L+ + SAT+ S ED T+ + + Sbjct 415 THPELRASLWSATMGSS-------------------IEDMAKTTIKERKLSLPQTKSYPL 455 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 RL + + K A +++ A + + +IF +T Sbjct 456 LRLVVGLKDSAIPNIKHKLVYAATEQGKLLGLRQLIHPTAATTSDVRLRP-PFLIFTQTI 514 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 L + P + G LH D +R ++ F+KG++ L+ TD+ A Sbjct 515 PRAIALHSELLYD--IPPEAGGSARIAVLHSDLSDTQRSDIMKGFRKGEIWILVTTDLLA 572 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATEKEKVWYHVCSSRG 635 RG+D G+ V+N +P+ YVHR+GR GRA R G+A++ E + + Sbjct 573 RGVDFRGINGVVNYDIPNSPAVYVHRVGRTGRAGREGGVAVTYYTKEDIPYVKSIANIID 632 Query 636 KGCYNTRLKEDGGCTIWY 653 + W Sbjct 633 VSEKLRGENGERSVQKWL 650 Score = 73.6 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 52/124 (42%), Gaps = 22/124 (18%) Query 3 AFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGG---------------DVL 43 +F E+ + +A+ + E + +PT++Q S+PL+LG D+L Sbjct 186 SFKELRSKYKISRRLAENIAEQGFTVPTEVQLGSLPLLLGNSAVPGGSSDSTSATEPDLL 245 Query 44 MAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA 103 + A TGSGKT +F IPVI + + + + + + G A Sbjct 246 VVAPTGSGKTLSFMIPVINKIVRHH---HTHPEERGIFAVVVAPTKELASQIVNEGRKLA 302 Query 104 IGSD 107 +G+ Sbjct 303 LGTG 306 >sp|Q5XPI3|RN123_MOUSE E3 ubiquitin-protein ligase RNF123 OS=Mus musculus OX=10090 GN=Rnf123 PE=1 SV=1 Length=1314 Score = 184 bits (466), Expect = 6e-47, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 93/217 (43%), Gaps = 10/217 (5%) Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGK 172 + R+T + KGK YEV QGL ++GW T+ + +G + + G Sbjct 119 SNFGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRV 178 Query 173 KSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV 232 + N NYG+ + D + C +D+D G + F NG LG AFE A FPA Sbjct 179 RKWNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAIS 238 Query 233 LKNAE-LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH-SGNAQVTQTKFLPNAPKAL 290 L E + FNFG ++P GF L P +V++Q G Q + L L Sbjct 239 LSFKESVAFNFGSRPLRYPVA-GFRPLQDPPFADLVRAQRLLGCFQAVLSVELDPVEGRL 297 Query 291 IVEPSRELAEQTLNNIKQFKKYIDN---PKLRELLII 324 + S E Q + +I + P LR++ ++ Sbjct 298 VETESSEWQLQGQPTVLLTLAHIFHHFAPLLRKVYLV 334 >sp|Q0CMB0|ROK1_ASPTN ATP-dependent RNA helicase rok1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=rok1 PE=3 SV=2 Length=749 Score = 181 bits (459), Expect = 8e-47, Method: Composition-based stats. Identities = 93/500 (19%), Positives = 176/500 (35%), Gaps = 79/500 (16%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG------FV 256 V F + ++ + ++ Q ++ L G+ + K G + Sbjct 192 VSFKELRTKYKISRRLAENIAEQGFTVPTEVQLGTLPLQLGDSSVQQASKPGETVEPDLL 251 Query 257 ALSKAPDGYIVKSQHSGNAQVTQ---TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 ++ G + ++ + + A++V P++ELA Q +N ++ + Sbjct 252 VVAPTGSGKTLSFLIPVINKIVRHHHEQPDERGIFAVVVAPTKELASQIVNEGRKL---V 308 Query 314 DNPKLRELLIIGGVAA--------RDQLSVLEN--------------------------- 338 ++ L+ G+ D+ VL+ Sbjct 309 QGTGVKITLMKKGMQVVERDGDGDSDEKDVLDEDSADSGSDSEDDEQTTDKKTKGKAPVT 368 Query 339 GVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 DI+V TP L + +S + L VR +VLDEAD LL + + + Sbjct 369 KSDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFREQTLDIWR----- 423 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 + L+ + SAT+ S +V+ L++ + DL G + VV + Sbjct 424 SCTHPELRASLWSATMGS-NVEDLAKSTIQ--ERKDLSGTTKSYPLIRLVVGLKDSAIPN 480 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 + +L + + ++ L A A H +IF + Sbjct 481 IQHKLVYAATEQGKLLG-----------------LRQLLHPTARTATDVHLRPPFLIFTQ 523 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 T L + P + G LH + +R + ++ F+KG++ L+ TD+ Sbjct 524 TIPRAVALHSELLYD--IPPEAGGSSRIAVLHSELSDSQRSEIMKGFRKGEIWILVTTDL 581 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATEKEKVWYHVCSS 633 ARG+D G+ V+N +P+ YVHR+GR GRA R G+A++ E + + Sbjct 582 LARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGVAVTYYTKEDIPYVKSIANI 641 Query 634 RGKGCYNTRLKEDGGCTIWY 653 + W Sbjct 642 IDVSEKLRGAGGEKSVQKWL 661 Score = 71.3 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 28/123 (23%), Positives = 51/123 (41%), Gaps = 21/123 (17%) Query 3 AFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILG--------------GGDVLM 44 +F E+ + +A+ + E + +PT++Q ++PL LG D+L+ Sbjct 193 SFKELRTKYKISRRLAENIAEQGFTVPTEVQLGTLPLQLGDSSVQQASKPGETVEPDLLV 252 Query 45 AAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 A TGSGKT +F IPVI + +Q + + + + + G Sbjct 253 VAPTGSGKTLSFLIPVINKIVRHHHEQPDER---GIFAVVVAPTKELASQIVNEGRKLVQ 309 Query 105 GSD 107 G+ Sbjct 310 GTG 312 >sp|A2QCW6|DBP9_ASPNC ATP-dependent RNA helicase dbp9 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dbp9 PE=3 SV=1 Length=616 Score = 179 bits (454), Expect = 1e-46, Method: Composition-based stats. Identities = 82/408 (20%), Positives = 143/408 (35%), Gaps = 30/408 (7%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 + L L + + + ++ + +A +K G Sbjct 29 FESLNLDPRLRQALIKEKFTKPTPVQAKAIPLALA--------GKDILARAKTGSGKTAA 80 Query 269 SQHSGNAQVTQTKFLPN---APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 + Q K A LI+ P+RELAEQ + F + +R + + Sbjct 81 YVLPILQTILQKKAADPSLKATTGLILVPTRELAEQVQKVVTTFAAFC-GKDVRSVNLTQ 139 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 V+ Q ++L + DIV+ TP R+ + L+L + LV+DEAD +LS GY + IN Sbjct 140 KVSEAVQRTMLSDYPDIVISTPARVIANLGNSSLSLDNLTHLVIDEADLVLSYGYDEDIN 199 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV 445 + IP + +Q + SATL S +V L P + L+ ++ V V Sbjct 200 ALSKAIP------RGVQTFLMSATLTS-EVDTLKGLFCRSPVVLKLEDKEEKGAGVSQFV 252 Query 446 VPVNPKTDRLWERLGKSHIRTD-----DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 V L + V D E + +L E V + Sbjct 253 VKCAEDEKFLLTYVIFKLQLIKGKVIIFVGDIDRCYRLKLFLEQFGVKSCVLNSELPVNS 312 Query 501 IKE--HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL 558 + ++ + D + ++ + + + G E + + Sbjct 313 RIHVVQEFNKGVYDIIIAADDQEVLGSKSKKAKNAGADEEEEAAGVM-GSSDDEEAEDDK 371 Query 559 ERFKKGDVRFLICTDV---AARGIDIHGVPYVINVTLPDEKQNYVHRI 603 + + R L + +RGID V V+N LP ++Y HRI Sbjct 372 KSNRPDKRRKLTAKEKDYGISRGIDFQNVACVLNFDLPTTAKSYTHRI 419 Score = 104 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 29/101 (29%), Positives = 48/101 (48%), Gaps = 3/101 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F + + P + QA+ + + PT +QA++IPL L G D+L A+TGSGKT A+ +P++Q Sbjct 29 FESLNLDPRLRQALIKEKFTKPTPVQAKAIPLALAGKDILARAKTGSGKTAAYVLPILQT 88 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 + + K T + + FA Sbjct 89 ILQKKAADPSLK---ATTGLILVPTRELAEQVQKVVTTFAA 126 >sp|Q9W3Y5|Y4443_DROME Putative ATP-dependent RNA helicase CG14443 OS=Drosophila melanogaster OX=7227 GN=CG14443 PE=3 SV=2 Length=736 Score = 180 bits (457), Expect = 1e-46, Method: Composition-based stats. Identities = 72/382 (19%), Positives = 135/382 (35%), Gaps = 74/382 (19%) Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFL---PNAPKALIVEPSRELAEQTLNNIK 307 V +S G + G ++ + L P LI+ RE A + Sbjct 366 EGKNIVMISGKGTGKTLGYLLPGIMKMHNQRGLMQHKKGPIVLILVDCREAAVMVQREV- 424 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVR 365 Y + +LR ++G + D++V + GRL ++ K + L + Sbjct 425 --LYYTNPLELRTHCLLGNSQWQGHAE-----CDLLVASAGRLLQMIDNKKHVVELERCT 477 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 +LVLD D ++ G I R+ ++ Q+IV S+T S ++K+++ K + Sbjct 478 YLVLDNIDRMIDVGLEGNICRLLCRL------RPHAQLIV-SSTSWSSNLKRMANKFLGQ 530 Query 426 PTWVDLKGEDSVPDTVHHV-----VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 T + + +++ + ++ VV K +RL + L + +D Sbjct 531 YTAIRVGEINNIGVRLQNIRQRVEVVNGLSKVERLMKELTAIYDTSDI------------ 578 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 + +I+ + + + L + Sbjct 579 -------------------------PGKVVIYVKRQKVVEELVDLIR----------NCV 603 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV 600 C +HG R E + + F G ++ T + + +D+ G+ YVIN PD YV Sbjct 604 PCEGIHGGRTAQENQGIIHDFGTGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYV 663 Query 601 HRIGRVG--RAERMGLAISLVA 620 R+ R G R IS Sbjct 664 QRMSRTGCLSYNRNCEVISFFT 685 Score = 71.3 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV 60 + +F G I Q +E+ + PT IQA++ + G +++M + G+GKT + +P Sbjct 329 VLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGKNIVMISGKGTGKTLGYLLPG 388 Query 61 IQIVYETLKDQQEGKKGK 78 I ++ Q KKG Sbjct 389 IMKMHNQRGLMQ-HKKGP 405 >sp|Q54BD6|DDX51_DICDI Probable ATP-dependent RNA helicase ddx51 OS=Dictyostelium discoideum OX=44689 GN=ddx51 PE=3 SV=1 Length=563 Score = 176 bits (445), Expect = 7e-46, Method: Composition-based stats. Identities = 79/365 (22%), Positives = 134/365 (37%), Gaps = 25/365 (7%) Query 294 PSRELAEQTLNNIKQFKKYIDNPKLREL---------LIIGGVAARDQLSVLENGVDIVV 344 P+ +L Q + K D L L+I + + + E+ VDI+V Sbjct 94 PTHDLVIQVEKTFQSIIKGTDLVVLSLGVKPFHIEQKLLIKNHSYGEHA-LYESLVDIIV 152 Query 345 GTPGRLDDLVSTG-KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT--SDGKRL 401 TPGR+ D ++ L + +LV+DEAD LL Q + D++ + + Q + + + Sbjct 153 STPGRIVDHINETLGFTLKYLNYLVIDEADRLLRQSFQDWLEIVIDSTNQHSDLNQQQEE 212 Query 402 QVIVC-SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 Q+I S K +S K + E + + + NP L + Sbjct 213 QLIKYNSKGDIELFEKSISLKDNNNQMNHLCWSEFKLVKLLLSATMTYNPSKISLLQLNA 272 Query 461 KSHIRTDDVHAKDNTRPG--------ANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 T + P +N + + I+ + I F Sbjct 273 PLFFTTSKTKEIKYSMPSTLKECYIISNGDQKPLVLLNIIYESLLKNNANGENKKKIICF 332 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 ++ L G +F+C ER L RFK + LIC+ Sbjct 333 TKSVDITHRLNTLLKLIG---QVDKLKFTCEEYSSSLSTVERADLLSRFKLNQIDILICS 389 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 D+ +RG+DI + VIN P YVHR+GR RA G++ ++V + K + + Sbjct 390 DIMSRGMDIQDIDVVINYNTPPNITLYVHRVGRTARAGNFGVSYTIVDKSEIKYYISMMK 449 Query 633 SRGKG 637 + Sbjct 450 KAERS 454 Score = 64.0 bits (154), Expect = 3e-09, Method: Composition-based stats. Identities = 19/62 (31%), Positives = 32/62 (52%), Gaps = 2/62 (3%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLI--LGGGDVLMAAETGSGKTGAFSIPV 60 G+ + ++E + +Q E +P I G D+ + A TGSGKT A++IP+ Sbjct 16 TLESFGIEEWLINNLKEQSIINLFPVQQEIVPFINRTEGHDICVCAPTGSGKTLAYAIPL 75 Query 61 IQ 62 +Q Sbjct 76 VQ 77 >sp|A1D1E3|ROK1_NEOFI ATP-dependent RNA helicase rok1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rok1 PE=3 SV=1 Length=738 Score = 178 bits (451), Expect = 8e-46, Method: Composition-based stats. Identities = 79/486 (16%), Positives = 158/486 (33%), Gaps = 75/486 (15%) Query 213 GLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDG------FVALSKAPDGYI 266 ++ + ++ Q ++ L + KD + ++ G Sbjct 197 KISRRLAENIAEQGFSVPTEVQLGTLPLLLEGFKVSGNSKDAESIEPDLLVVAPTGSGKT 256 Query 267 VKSQHSGNAQVTQ---TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 + ++ + + +++V P++ELA Q +N ++ ++ L+ Sbjct 257 LSFLIPVINKIVRHHHEQEEERGIFSVVVAPTKELASQIVNEGRKLVH---GTGVKITLM 313 Query 324 IGG-------------------------------VAARDQLSVLENGVDIVVGTPGRLDD 352 G + + DI+V TP L + Sbjct 314 KKGMRVVDREDDDDENSHSEDSEEGSESEQDEPSTTRKKKGKAPVTKSDILVTTPLLLVN 373 Query 353 LVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 +S + L VR +VLDEAD LL + + D + L+ + SA Sbjct 374 ALSANRTKPMATLPLVRNIVLDEADVLLDELFRDQTLDIWRAC-----THPELRASLWSA 428 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 T+ S +++ L++ + + + VV + + +L + Sbjct 429 TMGS-NIEDLAKSTIK--ERKQAYDRTNSYPLLRLVVGLKDSAIPNIEHKLVYAATEQGK 485 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 + A + +IF +T L Sbjct 486 LLGLRQLLHPAAASASDVRLRPPF-----------------LIFTQTIPRAIALHSELRY 528 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 + + LH D +R + ++ F+KG++ L+ TD+ ARG+D G+ V+ Sbjct 529 DIPAEAGGSSRIAV--LHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVV 586 Query 589 NVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDG 647 N +P+ YVHR+GR GRA R G+A++ E + + + Sbjct 587 NYDIPNSAAVYVHRVGRTGRAGREGGIAVTYYTKEDIPYVKSIANIIDVSEKLRGKDGEK 646 Query 648 GCTIWY 653 W Sbjct 647 SIQKWL 652 Score = 79.0 bits (193), Expect = 7e-14, Method: Composition-based stats. Identities = 28/118 (24%), Positives = 51/118 (43%), Gaps = 21/118 (18%) Query 3 AFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILGG--------------GDVLM 44 +F E+ + +A+ + E + +PT++Q ++PL+L G D+L+ Sbjct 188 SFKELRTRYKISRRLAENIAEQGFSVPTEVQLGTLPLLLEGFKVSGNSKDAESIEPDLLV 247 Query 45 AAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 A TGSGKT +F IPVI + +Q+E + + + + G Sbjct 248 VAPTGSGKTLSFLIPVINKIVRHHHEQEEER---GIFSVVVAPTKELASQIVNEGRKL 302 >sp|Q4WRH5|ROK1_ASPFU ATP-dependent RNA helicase rok1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=rok1 PE=3 SV=1 Length=739 Score = 178 bits (450), Expect = 1e-45, Method: Composition-based stats. Identities = 78/450 (17%), Positives = 154/450 (34%), Gaps = 69/450 (15%) Query 243 GEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ---TKFLPNAPKALIVEPSRELA 299 G + + + ++ G + ++ + + ++IV P++ELA Sbjct 234 GNSKSAESIEPDLLVVAPTGSGKTLSFLIPVINKIVRHHHEQEKERGIFSVIVAPTKELA 293 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGV-----------------------AARDQLSVL 336 Q +N ++ + ++ L+ G+ + +D+ S Sbjct 294 SQIVNEGRKL---VHGTGVKITLMKKGMRVVDREDDDDENSHSEDSEEGSDSEQDEPSTT 350 Query 337 ENG--------VDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFI 384 DI+V TP L + +S + L VR +VLDEAD LL + + + Sbjct 351 RKKKGKAPITKSDILVTTPLLLVNALSANRTKPMATLPLVRNIVLDEADVLLDELFREQT 410 Query 385 NRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV 444 + L+ + SAT+ S +++ L++ + + + V Sbjct 411 LDIWRAC-----THPELRASLWSATMGS-NIEDLAKSTIK--ERKQAYDQTKSYPLLRLV 462 Query 445 VVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEH 504 V + + +L + + A + Sbjct 463 VGLKDSAIPNIEHKLVYAATEQGKLLGLRQLLHPAAASVSDVRLRPPF------------ 510 Query 505 KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKG 564 +IF +T L + + LH D +R + ++ F+KG Sbjct 511 -----LIFTQTIPRAIALHSELRYDIPAEAGGSSRIAV--LHSDLSDGQRSEIMKNFRKG 563 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATEK 623 ++ L+ TD+ ARG+D G+ V+N +P+ YVHR+GR GRA R G+A++ E Sbjct 564 EIWILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGIAVTYYTKED 623 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 + + + W Sbjct 624 IPYVKSIANIIDVSEKLRGKDGEKSIQKWL 653 Score = 65.2 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 27/123 (22%), Positives = 48/123 (39%), Gaps = 31/123 (25%) Query 3 AFSEM----GVMPEIAQAVEEMDWLLPTDIQ-------------------AESIPLILGG 39 +F E+ + +A+ + E + +PT++Q AESI Sbjct 189 SFKELRTRYKISRRLAENIAEQGFTVPTEVQLGTLPLLLGGFKASGNSKSAESIEP---- 244 Query 40 GDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRG 99 D+L+ A TGSGKT +F IPVI + +Q++ + + + + G Sbjct 245 -DLLVVAPTGSGKTLSFLIPVINKIVRHHHEQEKER---GIFSVIVAPTKELASQIVNEG 300 Query 100 SAF 102 Sbjct 301 RKL 303 >sp|Q4P7M1|DBP9_USTMA ATP-dependent RNA helicase DBP9 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=DBP9 PE=3 SV=1 Length=686 Score = 176 bits (447), Expect = 2e-45, Method: Composition-based stats. Identities = 100/525 (19%), Positives = 179/525 (34%), Gaps = 64/525 (12%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 G L K D ++ N Q+T +AL++ P+RELAEQ ++ +Y+ Sbjct 114 GLPLLQKVLDAKSAVAKSDANHQLT---------RALVLVPTRELAEQVFRHLSVVIEYV 164 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ-VRFLVLDEA 372 +R + + + + Q +L D+V+ TP + + + L+L + L +DEA Sbjct 165 -RDDIRLVNVAREASEKVQRLLLSEKPDVVIATPSKALNYLQNASLDLKSGMESLAIDEA 223 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 D +LS G+ + + Q + SAT+ S DV KL ++ P + L Sbjct 224 DLILSYGHDADVKSLLG----ANFLPSHFQSFLMSATMTS-DVSKLKGLLLRNPVVLKLN 278 Query 433 GEDSVPDT---VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 +D V L + K + N +++ E Sbjct 279 HDDEAASGSNLVQFYTKTTEEDKFLLAYVILKLKLIRGKAILFVNELERGYRLKLFLEKF 338 Query 490 KI--------LKGEYAVRAIKEHKMDQAIIFCRTKIDC------------------DNLE 523 + L ++E + T D E Sbjct 339 GLRACVLNAELPINSRYSIVEEFNKGKFDYIVATDEPTGASGNMQDDEGDDEEEDADERE 398 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + ++ + H + K + + +KG +RG+D Sbjct 399 ADEVDEQAEDQREAGKKRKSSEHAGAETKSNKSKVSQHRKGKNGA--SEYGVSRGVDFIN 456 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK----EKVWYHVCSSRGKGCY 639 V VIN LP +Y+HR+GR R G A+S V K Y ++R + + Sbjct 457 VSCVINFDLPTSVDSYIHRVGRTARGGASGTALSFVVPSDQVGRSKYLYCASTTRDESVF 516 Query 640 NTRLKED------GGCTIWYNEMQLLSEIEEHLNCTISQVEPDI--KVPVDEFDGKVTYG 691 K W + ++ + T+ + + + + E ++ Sbjct 517 KMLNKPSTISLLGSALQEWKYDSSSVAGFHYRVTDTLKSITKALIREARIKELKNEILTS 576 Query 692 QKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQL 736 K ++ H D LA + A L AQ S HL ++P L Sbjct 577 SK---LQSHFEDHPDDLAFLQHDKALLTSRAQQS--HLKHVPQYL 616 Score = 95.2 bits (235), Expect = 7e-19, Method: Composition-based stats. Identities = 26/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 FS + + P + +A+ ++ + +PT IQ ++IPL L G D+L A TGSGKT A+ +P++Q Sbjct 62 FSHI-LDPRLLRALADLGYGIPTPIQQKAIPLALAGKDILARARTGSGKTLAYGLPLLQK 120 Query 64 VYETLKDQQEGKKGKTTIKTGAS-VLNKWQMNPY 96 V + + + + + Sbjct 121 VLDAKSAVAKSDANHQLTRALVLVPTRELAEQVF 154 >sp|Q3E9C3|RH58_ARATH DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH58 PE=2 SV=1 Length=472 Score = 172 bits (436), Expect = 2e-45, Method: Composition-based stats. Identities = 83/455 (18%), Positives = 152/455 (33%), Gaps = 63/455 (14%) Query 198 IDKGHVKFSKNGKDLGLAFE-IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 + + V + G E I M+ ++ L F + Sbjct 66 VTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLF--------TGRDCI 117 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKK--YID 314 ++ G + + + ++ +A+IV P+REL Q + ID Sbjct 118 LHAQTGSGKTLTYLLLIFSLIN---PQRSSVQAVIVVPTRELGMQVTKVARMLAAKSEID 174 Query 315 NPKLRELLIIGGVAARDQLSVLE-NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 + ++ G R S L+ I+V T L ++ + VR LV+DE D Sbjct 175 VKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEVD 234 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 L S + + + +S K Q + SA++ Sbjct 235 FLFYS--SKQVGSVRKLLTSFSSCDK-RQTVFASASIPQH-------------------- 271 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 + V D + + VH + K K Sbjct 272 KHFVHDCIQQKWTKRD----------------VVHVHVSAIMPMPLCLLHRFVMCEKTNK 315 Query 494 GEYAVRAIKEHKMDQAIIFC-----RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + + ++ + AIIF ++K ++ + + KG + L GD Sbjct 316 HQVLLALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKG-SLEILLLEGD 374 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 + R +L ++G L+ TD+AARGID+ ++ N LP +Y+HR GR GR Sbjct 375 MNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGR 434 Query 609 ---AERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 ++R + +L+ +E+ V + C Sbjct 435 KPFSDRKCIVANLITSEERFVLQRYENELMFSCEE 469 Score = 74.4 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 9/99 (9%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 V I +EE+ ++ PTDIQ E++P + G D ++ A+TGSGKT + + + ++ Sbjct 83 VPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFSLINPQR 142 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSD 107 Q + M A S+ Sbjct 143 SSVQ---------AVIVVPTRELGMQVTKVARMLAAKSE 172 >sp|A1CNK1|ROK1_ASPCL ATP-dependent RNA helicase rok1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=rok1 PE=3 SV=1 Length=738 Score = 176 bits (446), Expect = 4e-45, Method: Composition-based stats. Identities = 85/413 (21%), Positives = 151/413 (37%), Gaps = 68/413 (16%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE- 337 Q++ ++IV P++ELA Q +N ++ + ++ L+ G+ ++ + Sbjct 269 QSQEQERGIFSIIVAPTKELASQIVNEGRKL---VHGTGVKIALMKKGMRVVEREDEDDD 325 Query 338 --------------------------------NGVDIVVGTPGRLDDLVSTGKLN----L 361 DI+V TP +L + +ST + L Sbjct 326 GDDSSSEDGDESSESEHEERPIAKKSKGKAPVTKSDILVTTPLQLVNALSTNQTKPMATL 385 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 VR +VLDEAD LL + D + L+ + SAT+ S +V+ L++ Sbjct 386 PLVRNIVLDEADVLLDPLFRDQTLNIWRAC-----THPELRASLWSATMGS-NVEDLAK- 438 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 T+ VN RL ++ + ++ A + Sbjct 439 -----------------STIKERKEAVNQTKSYPLLRLV-VGLKDSAIPNIEHKLIYAAT 480 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + ++ L A A +IF +T L P + G Sbjct 481 EQGKLLGLRQLLHPTAASASDVRLRPPFLIFTQTIPRAVALHSELRYD--IPTEAGGSSR 538 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 LH D +R + ++ F+KG++ L+ TD+ ARG+D G+ V+N +P+ YVH Sbjct 539 IAVLHSDLSDGQRSEIMKNFRKGEIWILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVH 598 Query 602 RIGRVGRAERM-GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 R+GR GRA R G+A++ E + + + W Sbjct 599 RVGRTGRAGREGGIAVTYYTKEDIPYVKSIANIIDVSEKLRGKTGEKSIQKWL 651 Score = 65.2 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 31/115 (27%), Positives = 53/115 (46%), Gaps = 17/115 (15%) Query 3 AFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILG----------GGDVLMAAET 48 +F E+ + +A+ + E + +PT++Q ++PL+LG D+L+ A T Sbjct 187 SFKELRSKYKISSRLAENIAEQGFTVPTEVQLGTLPLLLGGFESKAGESVEPDLLVVAPT 246 Query 49 GSGKTGAFSIPVIQIVYETLKDQ-QEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 GSGKT +F IPVI + DQ QE ++G + + + G Sbjct 247 GSGKTLSFLIPVINKIVRHHHDQSQEQERG--IFSIIVAPTKELASQIVNEGRKL 299 >sp|Q75NR7|RECQ4_MOUSE ATP-dependent DNA helicase Q4 OS=Mus musculus OX=10090 GN=Recql4 PE=2 SV=2 Length=1216 Score = 178 bits (450), Expect = 6e-45, Method: Composition-based stats. Identities = 95/517 (18%), Positives = 165/517 (32%), Gaps = 90/517 (17%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKA----LIVEPSRE 297 G F+ + + + +V +G + Q L A ++ L+V P Sbjct 493 LGYRAFRPGQERAIMRILSGISTLLVLPTGAGKSLCYQLPALLYAQRSPCLTLVVSPLLS 552 Query 298 LAE-QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGTPGRLDD 352 L + Q + L+ + G+ + + SVL+ V +++ +P L Sbjct 553 LMDDQVSDL---------PSCLKAACLHSGMTKKQRESVLKKVRAAQVHVLIVSPEALVG 603 Query 353 LVSTGKLNLSQ------VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 + G +L Q + F +DE LSQ +F + + Sbjct 604 CGARGPGSLPQAAQLPPIAFACIDEVH-CLSQWSHNFRPCYLRVCKVLREHMGVRCFLGL 662 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 +AT + ++ + + +L G ++P +H V L L RT Sbjct 663 TATATRSTARDVA-QHLGIAGEFELSGSANIPANLHLSVSMDRDSDQALVTLLQGDRFRT 721 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN----- 521 +D II+C T+ N Sbjct 722 ---------------------------------------LDSVIIYC-TRERIQNGWLAL 741 Query 522 LEQYFIQQGGG-PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 L G P G + H ER++ + F +G +R ++ T G+D Sbjct 742 LRTCLSMVGDSRPRGCGPEAIAEAYHAGMSSQERRRVQQAFMRGHLRMVVATVAFGMGLD 801 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 V V+++ LP ++YV IGR GR + + + E +W Sbjct 802 RPDVRAVLHLGLPPSFESYVQAIGRAGRDGKPAHCHLFMHPQGEDLW------------E 849 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGS 700 R T + +L+ + C+ V V E G+ TY G + Sbjct 850 LRRHAHADSTDFLAVKRLVQRVFPPCTCSQRPVSKSSPEEVKEHSGQQTY----PVLGQA 905 Query 701 YKGHVDILA--PTVQELAALEKEAQTSFLHLGYLPNQ 735 GH L TVQ L E+ +T +L P Sbjct 906 CLGHERALPVQSTVQALDMTEEAIETLLCYLELHPRH 942 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (46%), Gaps = 0/59 (0%) Query 10 MPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 E+ QA+E + + Q +I IL G L+ TG+GK+ + +P + + Sbjct 483 PAEVFQALERLGYRAFRPGQERAIMRILSGISTLLVLPTGAGKSLCYQLPALLYAQRSP 541 >sp|A0A5F9C6I2|RN123_RABIT E3 ubiquitin-protein ligase RNF123 OS=Oryctolagus cuniculus OX=9986 GN=RNF123 PE=1 SV=2 Length=1314 Score = 177 bits (448), Expect = 1e-44, Method: Composition-based stats. Identities = 55/205 (27%), Positives = 86/205 (42%), Gaps = 7/205 (3%) Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGK 172 + R+T + KGK YEV QGL ++GW T+ + +G + + G Sbjct 119 SNFGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRV 178 Query 173 KSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV 232 + N NYG+ + D + C +D+D G + F NG LG AFE A FPA Sbjct 179 RKWNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAIS 238 Query 233 LKNAE-LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH-SGNAQVTQTKFLPNAPKAL 290 L E + FNFG ++P G+ L P + ++Q G + + L L Sbjct 239 LSFKESVAFNFGSRPLRYPVA-GYRPLQDPPCADLTRAQRLLGCFRAVLSVELDPMEGRL 297 Query 291 IVEPSRELAEQTLNNIKQFKKYIDN 315 + + S E Q + +I + Sbjct 298 VEKESSEWQLQGQPTVLLTLAHIFH 322 >sp|P52271|Y308_MYCGE Probable ATP-dependent RNA helicase MG308 OS=Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37) OX=243273 GN=MG308 PE=3 SV=1 Length=410 Score = 168 bits (425), Expect = 2e-44, Method: Composition-based stats. Identities = 75/415 (18%), Positives = 145/415 (35%), Gaps = 80/415 (19%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 FK P + +++ G ++ + + P+A+I P++EL Q +N + Sbjct 27 FKLWPFQNIIGIAETGSGKTFAYLLPLLDKINTS---LDQPQAVIFVPTKELQWQIINIL 83 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 + KKY + +++ QL + L++ L S+VR+ Sbjct 84 TEIKKY-----FKTFTFATSFSSKAQL----------------IVSLLNEKYLFTSKVRY 122 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 +V DE D L Q + + SATL + ++ + ++++ Sbjct 123 VVFDEIDMFLEQSSIQQWLECVHLFQKAKPL-----FAFFSATLFNQQLQIIKKQVI-NT 176 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 ++L + + V H VV +N + Sbjct 177 KVINLHPKQWIHPLVKHFVVHLNTEN---------------------------------- 202 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 + + +K H+ Q I+FC + L Q + S ++ Sbjct 203 ------RFSGLLALLKHHQNQQIIVFCSNQKSLKQLTQLL---------SNNNISFGSIY 247 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 G ERK N + ++ L+ +D+ +RGID++ VI+ LP Y+HR GRV Sbjct 248 GSLTYQERKNNFTKATNNKLKLLVVSDLFSRGIDLNYFSVVISWDLPKIDSFYIHRSGRV 307 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 R G + + + + ++G N L +G Q ++ Sbjct 308 ARLNSWGRSYLFWNDQNQSKLNKLI-AKGIKFQNVSLTSNGDLKFLTENNQKTTK 361 Score = 52.1 bits (123), Expect = 1e-05, Method: Composition-based stats. Identities = 19/69 (28%), Positives = 32/69 (46%), Gaps = 7/69 (10%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQAES---IPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 M I Q +++ + T IQ P +++ AETGSGKT A+ +P++ Sbjct 1 MQFSSSIRQFLDKKRIVEFTKIQQAVFKLWPF----QNIIGIAETGSGKTFAYLLPLLDK 56 Query 64 VYETLKDQQ 72 + +L Q Sbjct 57 INTSLDQPQ 65 >sp|D3ZXK7|RN123_RAT E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus OX=10116 GN=Rnf123 PE=1 SV=1 Length=1318 Score = 174 bits (442), Expect = 6e-44, Method: Composition-based stats. Identities = 59/217 (27%), Positives = 93/217 (43%), Gaps = 10/217 (5%) Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGK 172 + R++ + KGK YEV QGL ++GW T+ + +G + + G Sbjct 117 SNFGTIRSSTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRV 176 Query 173 KSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV 232 + N NYG+ + D + C +D+D G + F NG LG AFE A FPA Sbjct 177 RKWNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAIS 236 Query 233 LKNAE-LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH-SGNAQVTQTKFLPNAPKAL 290 L E + FNFG ++P GF L P +V++Q G Q + L L Sbjct 237 LSFKESVAFNFGSRPLRYPVA-GFRPLQDPPFADLVRAQRLLGCFQTVLSVELDPVEGRL 295 Query 291 IVEPSRELAEQTLNNIKQFKKYIDN---PKLRELLII 324 + + S E + +I + P LR++ ++ Sbjct 296 VEKESSEWQLHGQPTVLLTLAHIFHHFAPLLRKVYLV 332 >sp|Q6C3J3|MRH4_YARLI ATP-dependent RNA helicase MRH4, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=MRH4 PE=3 SV=1 Length=514 Score = 169 bits (427), Expect = 8e-44, Method: Composition-based stats. Identities = 75/400 (19%), Positives = 152/400 (38%), Gaps = 69/400 (17%) Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN--------APKALIVEPSR 296 E+ + FV ++ G + + + + P+ +++I+ P+ Sbjct 149 EKIPVDRQKTFVLAAQTGSGKTLAYLLPLLSDLKDQEKFPSWQLEKHYKTVRSVILVPTL 208 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST 356 EL++Q +KQF++ + ++ G + ++ N +D++V TP L T Sbjct 209 ELSQQVGQVLKQFEEPLG---IKTFASAFGQSHQEIAKAFNNRLDVLVTTP---QKLQQT 262 Query 357 GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVK 416 + NL LV+DEAD L + D + +Q+P++ +AT+ ++ Sbjct 263 REKNLGGATHLVVDEADTLFDTNFIDSTTDVISQMPKLKCAA------FVAATVSKSFLR 316 Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 KL + ++PD + VV VN +++ H++ Sbjct 317 KL-RSFYPHVVVIAAPRLHAIPDHIRFSVVDVNKAPYYNNKKVALLQALYAISHSQKQKN 375 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 + K L+++ + G Sbjct 376 YVRRVVVFRNR----------------------------KEHIPELKKFLEENG------ 401 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKK-----------GDVRFLICTDVAARGIDIHGVP 585 + LHG + HER + +E++ +VR L+ TD+A+RG+D+ + Sbjct 402 ---YPVDTLHGKQDLHERNEVVEKYTNMPDAADQTENARNVRVLLTTDIASRGMDMKNLR 458 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +V+ +P +K +++HR+GR GR R G + +K Sbjct 459 FVVLYDVPFDKTDFIHRVGRTGRFGREGEVYMFTDNQDKK 498 Score = 47.0 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 48/130 (37%), Gaps = 37/130 (28%) Query 1 MAAFSEMGVMPEIAQAV---------EEMDWLLPTDIQAES------------------- 32 +++F+E+ + P++ + ++ + P+ IQ+ + Sbjct 85 ISSFNELKLHPDVRAVLPDVIQLPEHKQDQDIKPSIIQSLAVKIMRQSYTYKQRVKNEGE 144 Query 33 ------IPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLK--DQQEGKKGKTTIKTG 84 IP+ VL A+TGSGKT A+ +P++ + + K Q K KT Sbjct 145 EPTVEKIPVDRQKTFVLA-AQTGSGKTLAYLLPLLSDLKDQEKFPSWQLEKHYKTVRSVI 203 Query 85 ASVLNKWQMN 94 + Sbjct 204 LVPTLELSQQ 213 >sp|A3LT90|MRH4_PICST ATP-dependent RNA helicase MRH4, mitochondrial OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=MRH4 PE=3 SV=2 Length=593 Score = 169 bits (429), Expect = 1e-43, Method: Composition-based stats. Identities = 87/403 (22%), Positives = 161/403 (40%), Gaps = 89/403 (22%) Query 268 KSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQ----------------FKK 311 K + S NAQ+ ++ +++ P+ +L EQ + +++ K+ Sbjct 226 KYRASRNAQMVKS---------VVLVPTHDLVEQVYSTLERANSIKFDVEKIGANSRLKE 276 Query 312 YIDNP------KLRELLIIGGVAARDQLSV-LENGVDIVVGTPGRLDDL-----VSTGKL 359 ++ P L L G A + L+ VD++V TPG+L L V+ Sbjct 277 FLQLPEQNGSLNLSILKWGSGEAHKKLFDRCLKGRVDVLVTTPGKLASLSKLQNVNRPYR 336 Query 360 NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 L+ V + VLDEAD L+ + + + +P + K +I+CSAT+ L+ Sbjct 337 FLNHVEYCVLDEADTLMDESW------IETTMPVIEKFKKLRDLIICSATIPKRFQTTLN 390 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 + +++ V P +L +++ S I ++ Sbjct 391 RIFPTDDSIINI----------------VTPSLHKLPKQIKVSVIDSE------------ 422 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHK--MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 SP S+ + + YA+ + + I+F K ++L + + + Sbjct 423 LSPYHGSKTRALAQALYAITRDGTEPGLVKRVIVFVNKKESVNSLVDTLVNKFSHRPE-- 480 Query 538 HQFSCVCLHGDRKPHERKQNLERFK-----------KGDVRFLICTDVAARGIDIHGVPY 586 + + G+ KP ER + LE F ++ L+ +D+ ARG++ G+ Sbjct 481 ---DVIGITGEDKPEERSEKLEPFIKPAESIEEDPLNSKIKVLVTSDLMARGVNFVGIKN 537 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 VI + +P + VHRIGR GR + G I +V +K K W Sbjct 538 VIIMDIPHNSVDLVHRIGRTGRMNQSGRVILIVDKKKNKAWLS 580 >sp|Q5UQD1|YR458_MIMIV Putative ATP-dependent RNA helicase R458 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R458 PE=3 SV=1 Length=524 Score = 167 bits (424), Expect = 2e-43, Method: Composition-based stats. Identities = 78/438 (18%), Positives = 143/438 (33%), Gaps = 104/438 (24%) Query 240 FNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQT------KFLPNAPKALIVE 293 F G E L + D I +G + + + + Sbjct 110 FAKGYESPSEIQALVVPELIQRKDTLIQFKSGTGKTHAFLFGCLWGFDPDDDVLQYIFIT 169 Query 294 PSRELAEQTLNNIKQFKKYIDNPKLRELLIIG-----------------GVA-------- 328 S E+A Q ++ + L IG G + Sbjct 170 SSHEVATQIYEQAV----FLLPETAKIALCIGQKKSPNSFGNSGFKTPIGTSSLNHKPKS 225 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGK--LNLSQVRFLVLDEADGLLS--------- 377 +++ + I++ T GR D++ ++ + +DE D +++ Sbjct 226 IKEEREEIRQ-AQIIICTMGRFYDILCNKGWITTTRYLKAICVDEFDNIVASKTKQRSST 284 Query 378 -QGYSDFINRMHNQIPQVTSDGKR--LQVIVCSATLHSFDVKKLSEKIMHF-------PT 427 D + + +I Q + SAT+ + + K++ P Sbjct 285 VMNTEDQMAEIIQKIESEAPKNSENGAQRVFFSATVSPYAI-KIANSYFRKYSPIIGEPF 343 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 V L ED + + V + + Sbjct 344 IVLLDSEDYTLEGIRQYYVQCSNYFE---------------------------------- 369 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 K E + +K+ ++ QAIIF + +++ +Q S HG Sbjct 370 -----KKEIILDLLKQCRIAQAIIFANRIETANEIKKLLDEQ-------EVPISSAVFHG 417 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 D RK + F + +R LI TD+ +RG+D+ G+ V N +PD + Y+HR+GR G Sbjct 418 DLPAVTRKNIHKDFVENKIRLLISTDLTSRGLDVQGINVVFNFDMPDTLETYIHRVGRSG 477 Query 608 RAERMGLAISLVATEKEK 625 R R G++ISL+ + K Sbjct 478 RYGRKGVSISLILVNQNK 495 Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 +F+E + + + P++IQA +P ++ D L+ ++G+GKT AF + Sbjct 99 KSFAE-----HLIRKTFAKGYESPSEIQALVVPELIQRKDTLIQFKSGTGKTHAFLFGCL 153 >sp|Q59S59|MRH4_CANAL ATP-dependent RNA helicase MRH4, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MRH4 PE=3 SV=2 Length=555 Score = 168 bits (426), Expect = 2e-43, Method: Composition-based stats. Identities = 81/402 (20%), Positives = 147/402 (37%), Gaps = 78/402 (19%) Query 267 VKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQ--------------FKKY 312 ++ S T+ K++I+ P+ EL +Q +++ F + Sbjct 180 MEFWKSDPEGYDNTRKKGQFVKSVILLPTNELVDQVYETLQRANSFELDHKGAPGNFTSF 239 Query 313 IDNPKLRELLIIG-----GVAARDQLSVLEN--GVDIVVGTPGRLDDL-----VSTGKLN 360 ++ P+ + + I G A LE +D+++ TPG++ ++ Sbjct 240 LELPENKTMNITTMKLGQGEAPVRLFRQLETKGPIDVLITTPGKIVAFSKLVNINRPFRV 299 Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 + V++ VLDEAD L + + P K L +I+ SAT+ KKLS+ Sbjct 300 FANVKYCVLDEADTLFDDSFEKNTTDVITHFP------KLLDLILVSATIPKVFEKKLSK 353 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 R R+ + + K T Sbjct 354 LF----------------------------PDQRSLIRVATPSLHKVPRNIKVMTIDADV 385 Query 481 SPEMWSEAIKILKGEYAV--RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGH 538 +P S+ + + YA+ + + + I+F K + D + + I + + Sbjct 386 APYNGSKPRCLAQALYAISKDGTEPGYVKRIIVFVNEKSEVDGIVESMITKYKVRPEDIV 445 Query 539 QFSCVCLHGDRKPHERKQNLERFKK-----------GDVRFLICTDVAARGIDIHGVPYV 587 S G +RK L+ F + V+ L+ TD+ ARG++ GV V Sbjct 446 GVS-----GSVNIRDRKDMLQPFLQPAELIENDDFGSKVKILVTTDLLARGLNFQGVKNV 500 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 I + LP + VHR+GR GR + G +V + +K W Sbjct 501 ILLGLPRNSVDLVHRLGRTGRMNQNGRVFVIVDKKSKKSWVK 542 Score = 42.4 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 52/159 (33%), Gaps = 58/159 (36%) Query 1 MAAFSEMGVMPEIAQA-VEEMDWL----------------LPTDIQAESIPLI------- 36 + +F ++ + P + +A ++E+ PT +Q +I I Sbjct 63 ITSFDQLKIFPSVREAMIKEIKSQYNLKGPRHSNIDEIDIKPTPVQIAAIRKINQTRKLK 122 Query 37 -----LGGGD--------------------VLMAAETGSGKTGAFSIPVIQIV----YET 67 L G D +AAETGSGKT ++ P++ + E Sbjct 123 VPNKDLEGMDDAERIQFELQNANEIQKTKVFTVAAETGSGKTWSYLAPLLSKLKSDDMEF 182 Query 68 LKDQQEG-----KKGKTTIKTGASVLNKWQMNPYDRGSA 101 K EG KKG+ N+ Y+ Sbjct 183 WKSDPEGYDNTRKKGQFVKSVILLPTNELVDQVYETLQR 221 >sp|O94712|YC5C_SCHPO Uncharacterized protein C1259.12c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1259.12c PE=4 SV=2 Length=491 Score = 166 bits (421), Expect = 4e-43, Method: Composition-based stats. Identities = 57/251 (23%), Positives = 100/251 (40%), Gaps = 39/251 (16%) Query 27 DIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGAS 86 I +++PL L G T G+ S P + L++ ++G T T + Sbjct 20 PINFDNLPLYLQG--------TNYGENVLRSDPRWLKWEKYLREFDMTREGNVT-NTPKA 70 Query 87 VLNKWQMNPYDRGSAFAIGSDGLCC-----------QSREVKEWHGCRATKGLMKGKHYY 135 + + W NP D+ + + ++ + + VK H + + +YY Sbjct 71 IPSSW--NPNDKSDSLELMNNNMGVYFFGPEAGTEHDAASVKADHAIPSNTSI----YYY 124 Query 136 EVSCHD---QGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHN--KQFDNYGEEFTM 188 E+ +G VG+ MQ + G +G+ G + N K + YG EFT Sbjct 125 EIQILSRGKEGKMGVGFCRKSMQTNRLPGCTAESWGYHGNSGEKFNCSKTGEAYGPEFTT 184 Query 189 HDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLK--NAELKFNFGEEE 246 D IGC ++ + ++KNG LG+AF+ + L+P LK ++ NFG+ Sbjct 185 GDIIGCGVNFINRTIFYTKNGAYLGVAFKK----VSDVLYPVIGLKSHGEHVEVNFGQNP 240 Query 247 FKFPPKDGFVA 257 F + Sbjct 241 FLYDIDYAIQM 251 >sp|Q6CWQ5|MRH4_KLULA ATP-dependent RNA helicase MRH4, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=MRH4 PE=3 SV=1 Length=584 Score = 167 bits (422), Expect = 1e-42, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 142/370 (38%), Gaps = 38/370 (10%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 +++I+ P+ EL EQ + + + + + G + + + L+ +DI+V T Sbjct 229 VRSIILLPTHELVEQVYQTVSKLEPALGMHTYKWDA---GSSYKGFVEALKGRIDIMVTT 285 Query 347 PGRLDDLVSTGKLN-----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 PG++ L + +N LSQV+FLV+DEAD LL + + + + + Sbjct 286 PGKILSLFNISMVNRPDRILSQVKFLVMDEADTLLDKSWVEDSYSTIKHMQNLNH----- 340 Query 402 QVIVCSATLHSFDVKKLSEKI-----MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 V+ CSAT+ K ++ + P + ++ + + KT L Sbjct 341 -VLFCSATIPKEFQKTITRLFPTVGVIASPNLHKINHKNQIKLINADMAPYKGSKTKALA 399 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK-------EHKMDQA 509 + L + D + N E L +Y + E ++++ Sbjct 400 QILYSINRDNIDPGFEKRVVIFVNEKENVPLVATKLANQYGHDVVALTGNDSVEERLEKI 459 Query 510 IIFC--RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 F K+ E+ + + D E F + ++ Sbjct 460 KPFMDPPKKMTTRKSEKVTTENTVTMKIPNSNIVIEEIPEDN---------EAFVESTLK 510 Query 568 FLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 L+ TDV ARGI+ G YV+ +P+ + VHR+GR GR + G ++ ++ ++ K W Sbjct 511 VLVTTDVLARGINFRGCRYVVLYDIPNTPVDLVHRVGRTGRMNQKG-SVFIITGKRVKNW 569 Query 628 YHVCSSRGKG 637 S Sbjct 570 VKAIPSIVSK 579 Score = 52.8 bits (125), Expect = 9e-06, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 15/94 (16%) Query 24 LPTDIQAESI---------PLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQ--- 71 P+ IQ +I P L L+AAETGSGKT A+ IP++ + T + Sbjct 164 KPSPIQTTAIYQTSKTLMDPQ-LQVR--LIAAETGSGKTMAYLIPLVDYLKRTEMENPSW 220 Query 72 QEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIG 105 + K ++ Y S Sbjct 221 ETLKDKAIVRSIILLPTHELVEQVYQTVSKLEPA 254 >sp|Q5XPI4|RN123_HUMAN E3 ubiquitin-protein ligase RNF123 OS=Homo sapiens OX=9606 GN=RNF123 PE=1 SV=1 Length=1314 Score = 170 bits (431), Expect = 2e-42, Method: Composition-based stats. Identities = 52/180 (29%), Positives = 78/180 (43%), Gaps = 7/180 (4%) Query 117 KEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGK 172 + R+T + KGK YEV QGL ++GW T+ + +G + + G Sbjct 119 SNFGTIRSTTCVYKGKWLYEVLISSQGLMQIGWCTISCRFNQEEGVGDTHNSYAYDGNRV 178 Query 173 KSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV 232 + N NYG+ + D + C +D+D G + F NG LG AFE A FPA Sbjct 179 RKWNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLGMAYFPAIS 238 Query 233 LKNAE-LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH-SGNAQVTQTKFLPNAPKAL 290 L E + FNFG ++P G+ L P +V++Q G + + L L Sbjct 239 LSFKESVAFNFGSRPLRYPVA-GYRPLQDPPSADLVRAQRLLGCFRAVLSVELDPVEGRL 297 >sp|Q944S1|RH22_ARATH DEAD-box ATP-dependent RNA helicase 22 OS=Arabidopsis thaliana OX=3702 GN=RH22 PE=2 SV=1 Length=581 Score = 166 bits (420), Expect = 2e-42, Method: Composition-based stats. Identities = 97/556 (17%), Positives = 173/556 (31%), Gaps = 127/556 (23%) Query 154 ASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLG 213 +SL+ K+ GF + + + G +DT V + K LG Sbjct 45 SSLNRSDRKWVRGFAS----ATEAEVEKKG-----NDTF-----FADHTVSW----KSLG 86 Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 L+ + +++ + + + ++ + G S GY+ Sbjct 87 LSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETG----SGKTHGYLAPIIDQL 142 Query 274 NAQVTQTKFLPNAPK-------ALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGG 326 ++ + +LI+ P+ L EQ + + NP LR + G Sbjct 143 TNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVCGS 202 Query 327 VAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSD 382 D+L DI+V TP L + + + L V+++V DEAD LL + + Sbjct 203 QGWPDRL------PDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSFQN 256 Query 383 FINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD-------LKGED 435 I R+ N + V +L++ + P +D L+ ED Sbjct 257 QIIRLINMLR-----------------FDEKQVSRLAKSNLGRPMEIDASVPQIDLENED 299 Query 436 SVP-------------------DTVHH---VVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 D + V T + W R+ K + R+ Sbjct 300 DAEFDEGSISEEEDEEEEEEYLDDIAQMPSVEAEAGSDTKKGWRRVRKIYTRSKQYIFIA 359 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM--------------------------- 506 T P + + V H+ Sbjct 360 ATLPVNGKKTAGGILKHMFQDAVWVSGNFLHRNSPRLKQKWVEVTVDSQVDALIEAVKNN 419 Query 507 -----DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 ++ ++F T + + + C H + K ER L F Sbjct 420 NNTNTERTMVFANTVEAVEAVADIL---------EKASIQCYRYHKNHKLDERANILADF 470 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 ++ +CTD AARG+D+ V +VI +++HRIGR RA + G SL Sbjct 471 RE-TGGVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTE 529 Query 622 EKEKVWYHVCSSRGKG 637 + + + G Sbjct 530 ANRDLVEAIREAVKMG 545 Score = 91.7 bits (226), Expect = 6e-18, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 43/80 (54%), Gaps = 0/80 (0%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 ++ +G+ ++ A+ + + P+ QA IP IL G DV++AAETGSGKT + P+I Sbjct 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIID 140 Query 63 IVYETLKDQQEGKKGKTTIK 82 + T D + + + Sbjct 141 QLTNTALDSEVTNREERPFP 160 >sp|P53166|MRH4_YEAST ATP-dependent RNA helicase MRH4, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRH4 PE=1 SV=1 Length=561 Score = 165 bits (418), Expect = 3e-42, Method: Composition-based stats. Identities = 76/390 (19%), Positives = 147/390 (38%), Gaps = 32/390 (8%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +K Q ++ +T +++I+ P+ EL +Q + + K + + Sbjct 181 YLKRQELETPELWETLRKNVLIRSIILVPTHELVDQVYETVSKTKTLLGLNSFK---WDK 237 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDD-----LVSTGKLNLSQVRFLVLDEADGLLSQGY 380 + RD L ++N +DI+V TPG+L + +++ LS+V F+VLDEAD LL + + Sbjct 238 ATSYRDLLENIKNRIDILVTTPGKLLNLFSIRMITRPDKVLSKVGFVVLDEADTLLDRSW 297 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 + + +IP + +I CSAT+ + K +++ + +P Sbjct 298 LEETHSAIKRIPNINH------LIFCSATIP-QEFNKTMQRLFPTVVPIMTPRLHKLPFA 350 Query 441 VHHVVVPV------NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + V+ K L + L + + N + E + +L Sbjct 351 LDFKVINSALSPFKGSKIKALAQTLYAISNDDTEPGFEKRCIIFVNEKKNVPEIVNLLNK 410 Query 495 EYAVRAIK-------EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 ++ AI E + ++ + F + K S + + G Sbjct 411 KFGHNAIGLTGEDTFEERSEKIMPFLSPPRPLSEVVAQSTSPPTSLKKFEIPDSNIVI-G 469 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 K + L+ TD+ ARG++ GV V+ +P + +HR+GR Sbjct 470 KLKNTNSNGT--APSNKSLHVLVTTDLMARGLNFKGVRNVVLYDVPKTSIDLIHRVGRTA 527 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKG 637 R + G + ++ K K W K Sbjct 528 RM-KQGGRVFMLTDSKTKSWAKALPKIIKK 556 Score = 54.0 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 27/129 (21%), Positives = 50/129 (39%), Gaps = 30/129 (23%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLL----------------PTDIQAESIPLILGGGDVL- 43 ++ F ++ ++P + AV+E+ P+ IQ +I I +++ Sbjct 97 ISNFDQLLILPPVRDAVKEIISKESLKLQDSRKKTSENIIPSPIQTVAIKRI--SKNLMD 154 Query 44 -------MAAETGSGKTGAFSIPVIQIVYETLKDQQE----GKKGKTTIKTGASVLNKWQ 92 +AAETGSGKT A+ IP+I + + E +K ++ Sbjct 155 PKLQIHAIAAETGSGKTMAYLIPLIDYLKRQELETPELWETLRKNVLIRSIILVPTHELV 214 Query 93 MNPYDRGSA 101 Y+ S Sbjct 215 DQVYETVSK 223 >sp|A6ZUB2|MRH4_YEAS7 ATP-dependent RNA helicase MRH4, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=MRH4 PE=3 SV=1 Length=561 Score = 165 bits (418), Expect = 3e-42, Method: Composition-based stats. Identities = 76/390 (19%), Positives = 147/390 (38%), Gaps = 32/390 (8%) Query 266 IVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG 325 +K Q ++ +T +++I+ P+ EL +Q + + K + + Sbjct 181 YLKRQELETPELWETLRKNVLIRSIILVPTHELVDQVYETVSKTKTLLGLNSFK---WDK 237 Query 326 GVAARDQLSVLENGVDIVVGTPGRLDD-----LVSTGKLNLSQVRFLVLDEADGLLSQGY 380 + RD L ++N +DI+V TPG+L + +++ LS+V F+VLDEAD LL + + Sbjct 238 ATSYRDLLENIKNRIDILVTTPGKLLNLFSIRMITRPDKVLSKVGFVVLDEADTLLDRSW 297 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 + + +IP + +I CSAT+ + K +++ + +P Sbjct 298 LEETHSAIKRIPNINH------LIFCSATIP-QEFNKTMQRLFPTVVPIMTPRLHKLPFA 350 Query 441 VHHVVVPV------NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + V+ K L + L + + N + E + +L Sbjct 351 LDFKVINSALSPFKGSKIKALAQTLYAISNDDTEPGFEKRCIIFVNEKKNVPEIVNLLNK 410 Query 495 EYAVRAIK-------EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 ++ AI E + ++ + F + K S + + G Sbjct 411 KFGHNAIGLTGEDTFEERSEKIMPFLSPPRPLSEVVAQSTSPPTSLKKFEIPDSNIVI-G 469 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 K + L+ TD+ ARG++ GV V+ +P + +HR+GR Sbjct 470 KLKNTNSNGT--APSNKSLHVLVTTDLMARGLNFKGVRNVVLYDVPKTSIDLIHRVGRTA 527 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKG 637 R + G + ++ K K W K Sbjct 528 RM-KQGGRVFMLTDSKTKSWAKALPKIIKK 556 Score = 54.0 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 27/129 (21%), Positives = 50/129 (39%), Gaps = 30/129 (23%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLL----------------PTDIQAESIPLILGGGDVL- 43 ++ F ++ ++P + AV+E+ P+ IQ +I I +++ Sbjct 97 ISNFDQLLILPPVRDAVKEIISKESLKLQDSRKKTSENIIPSPIQTVAIKRI--SKNLMD 154 Query 44 -------MAAETGSGKTGAFSIPVIQIVYETLKDQQE----GKKGKTTIKTGASVLNKWQ 92 +AAETGSGKT A+ IP+I + + E +K ++ Sbjct 155 PKLQIHAIAAETGSGKTMAYLIPLIDYLKRQELETPELWETLRKNVLIRSIILVPTHELV 214 Query 93 MNPYDRGSA 101 Y+ S Sbjct 215 DQVYETVSK 223 >sp|Q0JFN7|RH58_ORYSJ DEAD-box ATP-dependent RNA helicase 58, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0970600 PE=2 SV=2 Length=438 Score = 161 bits (408), Expect = 8e-42, Method: Composition-based stats. Identities = 73/394 (19%), Positives = 142/394 (36%), Gaps = 55/394 (14%) Query 259 SKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 ++ G + S + F ++ +AL+V P+REL Q + Sbjct 85 AQTGSGKTLAYLLSV---FSAIDFGRSSVQALVVVPTRELGMQVTKVARILAA---KACT 138 Query 319 RELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQ 378 L+ GG+ R + V I+V T L ++ +L +R LV+DE D + Sbjct 139 VMALLDGGMLRRQKSWVKAEPPAIIVATVASLCQMIEKRAFSLQSMRVLVIDEVDFIF-- 196 Query 379 GYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 G S ++ + + ++ Q I SA++ + + +H ++ + + Sbjct 197 GSSKQVSSLRKILTSYSAASS-RQTIFASASIPQHN------RFVHD----CVQHKWTKT 245 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 D VH V PV P L + ++ K + + Sbjct 246 DVVHVHVNPVQPMPSHLQHK--------------------------YAICSKKERLHVLL 279 Query 499 RAIKEHKMDQAIIFC-----RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +++ IIF ++K + + G + L D + Sbjct 280 SLLEKDAPKSGIIFVAEQSEKSKKAGHPPSTTVVVEFLRTTYMG-SLEVLLLEEDMNFNA 338 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR--AER 611 R + K G L+ TD+A+RG D+ ++ N LP +Y+HR GR GR + Sbjct 339 RATSFTEVK-GKGFLLVSTDIASRGFDLPQTSHIYNFDLPKTAIDYLHRAGRTGREPFSK 397 Query 612 MGLAI-SLVATEKEKVWYHVCSSRGKGCYNTRLK 644 + ++ +L+ ++ V + C ++ Sbjct 398 LACSVTTLITEDEHFVLQRFQNELKFHCEELPVE 431 Score = 74.4 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 46/87 (53%), Gaps = 11/87 (13%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 V + Q EE+ +++PT++Q +S+P++L G D ++ A+TGSGKT A+ + V + Sbjct 48 VPEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAID--- 104 Query 69 KDQQEGKKGKTTIKTG-ASVLNKWQMN 94 G+++++ + M Sbjct 105 -------FGRSSVQALVVVPTRELGMQ 124 >sp|A5DR68|MRH4_PICGU ATP-dependent RNA helicase MRH4, mitochondrial OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=MRH4 PE=3 SV=2 Length=573 Score = 164 bits (414), Expect = 1e-41, Method: Composition-based stats. Identities = 77/388 (20%), Positives = 149/388 (38%), Gaps = 84/388 (22%) Query 287 PKALIVEPSRELAEQTLNNIK---------------------QFKKYIDNPK------LR 319 +AL+V P+ EL +Q N ++ ++ +++ P L Sbjct 212 IRALVVLPTHELVDQVYNTLRSANDQKFATDEVVDPKLLSDAKYARFLKAPDQLNGLHLN 271 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN-----LSQVRFLVLDEADG 374 G + R ++ VD++V TPG++ L ++ + V++ V+DEAD Sbjct 272 IKKFGAGDSHRVLFDGIKQRVDVLVTTPGKIQGLAKLQNVDRPFRFFNHVQYCVVDEADT 331 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 L+ + D + ++ + ++ CSAT+ + LS+ + + + Sbjct 332 LMDNSWVDDTTAVLRRLTKCKD------LVFCSATIPKQFNRTLSKMFPDEKSIIHINT- 384 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 ++ +VV + SP S+ + + Sbjct 385 PALHKIPRQIVVKI---------------------------IDAQVSPYNGSKTRCLAQA 417 Query 495 EYAVR--AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 YA+ + + + ++F K D L +++ G + V + GD KP Sbjct 418 LYAIHNDGTEAGYVKRILVFVNEKKDVAPLVDVLVKKYGNRAE-----DIVGITGDTKPE 472 Query 553 ERKQNLERFKK-----------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 ERK LE F K ++ L+ TD+ ARG++ G+ VI + LP+ + +H Sbjct 473 ERKGLLEPFLKPAELVEDDIDQSKIKVLVTTDLMARGMNFVGIKNVILMDLPNTSVDLMH 532 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYH 629 R+GR GR + G ++ + K W Sbjct 533 RVGRTGRMRQSGRVFVIIDKKTGKSWIK 560 Score = 40.5 bits (93), Expect = 0.055, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 47/142 (33%) Query 1 MAAFSEMGVMPEIAQAV-----EEMDWL------------LPTDIQAESIPLILGGGDV- 42 +++FS + + P + A+ ++ P+ +Q +I I ++ Sbjct 78 ISSFSSLRIFPTVRAAMVQEIKRGYNFKNTYMASKDDLEIKPSPVQVAAIRKINQPRNIK 137 Query 43 -----------------------------LMAAETGSGKTGAFSIPVIQIVYETLKDQQE 73 +AAETGSGKT A++ P++ + E + Sbjct 138 STKSRTPQSGAEIFSELMAQNDAKRLKVFTIAAETGSGKTWAYTAPMLTKLKEEDMELFN 197 Query 74 GKKGKTTIKTGASVLNKWQMNP 95 + A ++ + P Sbjct 198 ISEATYAEAKAAPIIRALVVLP 219 >sp|P30957|RYR2_RABIT Ryanodine receptor 2 OS=Oryctolagus cuniculus OX=9986 GN=RYR2 PE=1 SV=3 Length=4969 Score = 167 bits (423), Expect = 2e-41, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 10/194 (5%) Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 P + V TL D + K K +++ L + N A ++ +C + E Sbjct 1030 PRL--VPYTLLDDRTKKSNKDSLREAVRTLLGYGYNLEAPDQDHAARAE-VCSGTGERFR 1086 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHN 176 T + G+ Y+E G RVGWS Q +LG+D+ F F G + + Sbjct 1087 IFRAEKTYAVKAGRWYFEFEAVTSGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWH 1146 Query 177 KQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQALFPACV 232 + ++YG + D +GC +D+++ + F+ NG+ D G P C Sbjct 1147 QGNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCS 1206 Query 233 LKNAEL-KFNFGEE 245 L A++ + NFG++ Sbjct 1207 LGVAQVGRMNFGKD 1220 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 34/155 (22%), Positives = 54/155 (35%), Gaps = 34/155 (22%) Query 132 KHYYEVSC--------HDQGLCRVGWSTMQA------------SLDLGTDKFGFGFGG-- 169 K YYE+ + RVGW++ + +G D F +GF G Sbjct 672 KWYYELMVDHTEPFVTAEATHLRVGWASTEGYSPYPGGGEEWGGNGVGDDLFSYGFDGLH 731 Query 170 ----TGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ 225 ++ + + D I C LD+ + F NG+ + FE + Sbjct 732 LWSGCIARTVSSPNQHLLR---TDDVISCCLDLSAPSISFRINGQPVQGMFENFN--IDG 786 Query 226 ALFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FP +++F G EFKF P G+ Sbjct 787 LFFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAP 821 >sp|A7TE77|MRH4_VANPO ATP-dependent RNA helicase MRH4, mitochondrial OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=MRH4 PE=3 SV=1 Length=539 Score = 161 bits (408), Expect = 4e-41, Method: Composition-based stats. Identities = 75/400 (19%), Positives = 147/400 (37%), Gaps = 96/400 (24%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 +++I P+ EL +Q N +K K ++ K G + + L+N +DI++ T Sbjct 182 IRSVIFLPTHELVDQVYNTVK---KTENDLKFHVYKWDSGTKYPEIVEKLKNRIDILITT 238 Query 347 PGRLDDLVSTGKLN-----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 P +L +L + ++ LS+V+F+VLDEAD LL + + + +R +P Sbjct 239 PAKLLNLFNIRMISRADRLLSEVKFVVLDEADTLLDKSWVEDTHRAIRSLPNTNH----- 293 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 ++ CSAT+ + D E++ + +P +V ++ + + K Sbjct 294 -LLFCSATIPN-DFNDTLERLFPNTIPITTPRLHKLPKSVDFKII--DSSINPFKGSKIK 349 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + +T A D++ PG + I+F K D Sbjct 350 ALAQTLYAIANDSSEPGFE--------------------------KRCIVFTNEKKDVPY 383 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF-------------------- 561 + + K + C+ L + ER + + F Sbjct 384 IVEKL--------KVTYGHDCIGLTSNDSVEERLEKIHDFITPPKPITMKKETPKIENED 435 Query 562 ------------------------KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 + ++ L+ TD+ ARG++ GV ++ +P Sbjct 436 SVEVEGSNITIGDFSSKTSVKNSNSESSLKVLVSTDLMARGLNFQGVRNLVLYDVPQTSI 495 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 + +HR+GR R ++ G + ++ +K K W K Sbjct 496 DLIHRVGRTARMQQRGR-VFMITDKKTKSWAKALPKVIKK 534 Score = 47.8 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 53/126 (42%), Gaps = 27/126 (21%) Query 1 MAAFSEMGVMPEIAQAVE-------------EMDWLLPTDIQ-------AESIP-LILGG 39 +++F ++ ++PE+ +++ E + ++P+ IQ + ++ L Sbjct 80 LSSFDQLKILPEVRNSIKNIIKDETLSKKAKESEDVIPSPIQLIAMKKLSRTLMDPKLQH 139 Query 40 GDVLMAAETGSGKTGAFSIPVIQIVYETL---KDQQEGKKGKTTIKTGA-SVLNKWQMNP 95 + AAETGSGKT A+ IP+ + + E + K I++ ++ Sbjct 140 HAI--AAETGSGKTMAYLIPLFDYLKRQETEFPEDWEFMQDKAIIRSVIFLPTHELVDQV 197 Query 96 YDRGSA 101 Y+ Sbjct 198 YNTVKK 203 >sp|Q6H601|RH22_ORYSJ DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0383400 PE=2 SV=2 Length=577 Score = 162 bits (409), Expect = 5e-41, Method: Composition-based stats. Identities = 79/484 (16%), Positives = 159/484 (33%), Gaps = 83/484 (17%) Query 210 KDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS 269 + LG++ + + L +++ A + + + G S GY+V Sbjct 85 ESLGVSDRLASALHGAGLARPSLVQAACIPHVLTTNDVIVAAETG----SGKTHGYLVPL 140 Query 270 QHSGNAQV-------TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 ++ +Q + AL++ P+ L EQ + P Sbjct 141 IEKLCSKSISAEDGNSQDVTSGSPNIALVLCPNVMLCEQVVRMANSLVDESGEPLKSAAA 200 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLV-------STGKLNLSQVRFLVLDEADGL 375 + G DI+V TP L + + + L V+F+V DEAD L Sbjct 201 VCGPKGWP------TVRPDILVATPAALLNYLFDYDPEKRRRERFLRNVKFIVFDEADML 254 Query 376 LSQGYSDFINRMHNQI---------------------PQVTSDGKRLQVIVCSATLHSFD 414 L + + + R+ + + + Q SA L + D Sbjct 255 LCGSFENQVIRLIHMLRFDEKLLSRMEDSGKEISLGDTNEYREDSDSQ----SAELSADD 310 Query 415 VKKLSEKIMHFPTWVD------------------------LKGEDSVPDTVHHVVVPVNP 450 + + H P V+ + ++P + V Sbjct 311 EENEDGLVQHRPVNVENAHIGAHKKDWRRVRKVYRRSKQYVFVAATLPQSGKKTAGGVLK 370 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 + + +++ + + ++ + + G + ++ + Sbjct 371 RMFPNAVWVSGAYLHRHNPRLERRWIEVTADTQVSALLDAVKYGLKNEVHDTKLGPNRTM 430 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 +F T +++ + G C+ H D ER +NL+ F++ + L+ Sbjct 431 VFTNTVDAANSVSDILQRVG---------VPCILYHRDSSLEERAKNLQSFRE-NGGVLV 480 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 CTD AARG+D+ V +VI +++HR+GR RA + G+ SL + V Sbjct 481 CTDAAARGLDVPNVSHVIQAEFAACAVDFLHRVGRTARAGQSGIVTSLYTEANRDLVRAV 540 Query 631 CSSR 634 + Sbjct 541 RQAE 544 Score = 83.3 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 26/87 (30%), Positives = 44/87 (51%), Gaps = 0/87 (0%) Query 2 AAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 ++ +GV +A A+ P+ +QA IP +L DV++AAETGSGKT + +P+I Sbjct 82 TSWESLGVSDRLASALHGAGLARPSLVQAACIPHVLTTNDVIVAAETGSGKTHGYLVPLI 141 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVL 88 + + ++G T + L Sbjct 142 EKLCSKSISAEDGNSQDVTSGSPNIAL 168 >sp|Q6FJJ8|MRH4_CANGA ATP-dependent RNA helicase MRH4, mitochondrial OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=MRH4 PE=3 SV=1 Length=568 Score = 161 bits (408), Expect = 5e-41, Method: Composition-based stats. Identities = 82/428 (19%), Positives = 151/428 (35%), Gaps = 100/428 (23%) Query 261 APDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRE 320 AP +K Q + ++ +++I+ P+ EL +Q + D + Sbjct 185 APLLDYLKRQEIETPEKWESIKDKAIIRSVILVPTLELVDQIYTTLTCI---PDTLGIHV 241 Query 321 LLIIGGVAARDQLSVLENGVDIVVGTPGRLDD-----LVSTGKLNLSQVRFLVLDEADGL 375 GV + L L++ DI++ TP +L ++S L L ++ F+VLDEAD L Sbjct 242 HKWTTGVDYQQLLENLKSRTDILITTPSKLLSLQRVRMISRADLILKRIEFVVLDEADTL 301 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 L + + + ++ + V +++CSAT+ + + +++ P + L Sbjct 302 LDKSWLEDTHKALKAMSDVNH------LVLCSATIPNEFDRTMTKMF---PNAIPL---- 348 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 P+ +L + + I A SP S+ + + Sbjct 349 ------------TTPRLHKLPKGINFRIIN------------AAVSPYKGSKIKALAQTL 384 Query 496 YAVRAIKEHKM--DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 YA+ + I+F K + DN+ Q + G V L GD + Sbjct 385 YAIAYDGTDPGFEKRCIVFINEKKNVDNVVQKLRNEYG--------HDVVGLTGDMEGRT 436 Query 554 RKQNLERFKKG--------------------------------------------DVRFL 569 R + + F +R L Sbjct 437 RLELIRPFISPPEKLTEQEKQIDKDLNDQETVNISGSNISIGNIENSNKASNFIPKLRVL 496 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + TD+ ARG++ GV VI +P + VHR GR R + G + ++ +K + W Sbjct 497 VTTDLLARGLNFKGVRNVILYDVPITAIDLVHRAGRTARMRQSGR-VFMIIDKKTQSWAK 555 Query 630 VCSSRGKG 637 + K Sbjct 556 AVPTILKK 563 Score = 50.5 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 52/119 (44%), Gaps = 25/119 (21%) Query 1 MAAFSEMGVMPEIAQ---------AVEEMDWLLPTDIQAESIPLILGGGDVL-------- 43 + F E+ ++PE+ + ++ + + P+ IQ +I + +++ Sbjct 113 ITEFEELKLLPEVRKHVINLIKKDSLNTTEEIHPSPIQTIAIKRL--SKNLMEPKLQVHA 170 Query 44 MAAETGSGKTGAFSIPVIQIVYETL---KDQQEGKKGKTTIKTGASVLNKWQMNPYDRG 99 +AAETGSGKT A+ P++ + ++ E K K I++ V + D+ Sbjct 171 IAAETGSGKTMAYCAPLLDYLKRQEIETPEKWESIKDKAIIRSVILVPT---LELVDQI 226 >sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens OX=9606 GN=RYR2 PE=1 SV=3 Length=4967 Score = 166 bits (420), Expect = 6e-41, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 10/194 (5%) Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 P + V TL D + K K +++ L + N A ++ +C + E Sbjct 1030 PRL--VPYTLLDDRTKKSNKDSLREAVRTLLGYGYNLEAPDQDHAARAE-VCSGTGERFR 1086 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHN 176 T + G+ Y+E G RVGWS Q +LG+D+ F F G + + Sbjct 1087 IFRAEKTYAVKAGRWYFEFETVTAGDMRVGWSRPGCQPDQELGSDERAFAFDGFKAQRWH 1146 Query 177 KQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQALFPACV 232 + ++YG + D +GC +D+++ + F+ NG+ D G P C Sbjct 1147 QGNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCS 1206 Query 233 LKNAEL-KFNFGEE 245 L A++ + NFG++ Sbjct 1207 LGVAQVGRMNFGKD 1220 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 34/155 (22%), Positives = 54/155 (35%), Gaps = 34/155 (22%) Query 132 KHYYEVSC--------HDQGLCRVGWSTMQA------------SLDLGTDKFGFGFGG-- 169 K YYE+ + RVGW++ + +G D F +GF G Sbjct 672 KWYYELMVDHTEPFVTAEATHLRVGWASTEGYSPYPGGGEEWGGNGVGDDLFSYGFDGLH 731 Query 170 ----TGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ 225 ++ + + D I C LD+ + F NG+ + FE + Sbjct 732 LWSGCIARTVSSPNQHLLR---TDDVISCCLDLSAPSISFRINGQPVQGMFENFN--IDG 786 Query 226 ALFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FP +++F G EFKF P G+ Sbjct 787 LFFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAP 821 >sp|B0LPN4|RYR2_RAT Ryanodine receptor 2 OS=Rattus norvegicus OX=10116 GN=Ryr2 PE=1 SV=2 Length=4953 Score = 166 bits (419), Expect = 7e-41, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 83/194 (43%), Gaps = 10/194 (5%) Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 P + V TL D + K K +++ L + + A ++ +C + E Sbjct 1023 PRL--VPYTLLDDRTKKSNKDSLREAVRTLLGYGYHLEAPDQDHASRAE-VCSGTGERFR 1079 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHN 176 T + G+ Y+E G RVGWS Q L+LG+D+ F F G + + Sbjct 1080 IFRAEKTYAVKAGRWYFEFEAVTAGDMRVGWSRPGCQPDLELGSDERAFAFDGFKAQRWH 1139 Query 177 KQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQALFPACV 232 + ++YG + D +GC +D+++ + F+ NG+ D G P C Sbjct 1140 QGNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCS 1199 Query 233 LKNAEL-KFNFGEE 245 L A++ + NFG++ Sbjct 1200 LGVAQVGRMNFGKD 1213 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 35/155 (23%), Positives = 55/155 (35%), Gaps = 34/155 (22%) Query 132 KHYYEVSC--------HDQGLCRVGWSTMQA------------SLDLGTDKFGFGFGG-- 169 K YYE+ + RVGW++ + +G D F +GF G Sbjct 665 KWYYELMVDHTEPFVTAEATHLRVGWASTEGYSPYPGGGEEWGGNGVGDDLFSYGFDGLH 724 Query 170 ----TGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ 225 ++ + + D I C LD+ + F NG+ + FE + Sbjct 725 LWSGCIARTVSSPNQHLLR---TDDVISCCLDLSAPSISFRINGQPVQGMFENFN--IDG 779 Query 226 ALFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FP +++F G EFKF P G+ A Sbjct 780 LFFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAA 814 >sp|E9Q401|RYR2_MOUSE Ryanodine receptor 2 OS=Mus musculus OX=10090 GN=Ryr2 PE=1 SV=1 Length=4966 Score = 165 bits (417), Expect = 1e-40, Method: Composition-based stats. Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 10/194 (5%) Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE 118 P + V TL D + K K +++ L + + A ++ +C + E Sbjct 1030 PRL--VPYTLLDDRTKKSNKDSLREAVRTLLGYGYHLEAPDQDHASRAE-VCSGTGERFR 1086 Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHN 176 T + G+ Y+E G RVGWS Q L+LG+D F F G + + Sbjct 1087 IFRAEKTYAVKAGRWYFEFEAVTAGDMRVGWSRPGCQPDLELGSDDRAFAFDGFKAQRWH 1146 Query 177 KQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQALFPACV 232 + ++YG + D +GC +D+++ + F+ NG+ D G P C Sbjct 1147 QGNEHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEILLDDSGSELAFKDFDVGDGFIPVCS 1206 Query 233 LKNAEL-KFNFGEE 245 L A++ + NFG++ Sbjct 1207 LGVAQVGRMNFGKD 1220 Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 35/155 (23%), Positives = 55/155 (35%), Gaps = 34/155 (22%) Query 132 KHYYEVSC--------HDQGLCRVGWSTMQA------------SLDLGTDKFGFGFGG-- 169 K YYE+ + RVGW++ + +G D F +GF G Sbjct 672 KWYYELMVDHTEPFVTAEATHLRVGWASTEGYSPYPGGGEEWGGNGVGDDLFSYGFDGLH 731 Query 170 ----TGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ 225 ++ + + D I C LD+ + F NG+ + FE + Sbjct 732 LWSGCIARTVSSPNQHLLR---TDDVISCCLDLSAPSISFRINGQPVQGMFENFN--IDG 786 Query 226 ALFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FP +++F G EFKF P G+ A Sbjct 787 LFFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAA 821 >sp|Q9SIZ8|RKP_ARATH E3 ubiquitin-protein ligase RKP OS=Arabidopsis thaliana OX=3702 GN=RKP PE=2 SV=2 Length=1280 Score = 164 bits (414), Expect = 2e-40, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 20/199 (10%) Query 119 WHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLD----LGTDKFGFGFGGTGKKS 174 + RA + KGK YEV+ G+ ++GW+T+ +G + F G Sbjct 135 FSSARANACIWKGKWMYEVALETSGIQQLGWATLACPFTDQKGVGDADDSYAFDGRRVSK 194 Query 175 HNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFE-IPPHMKNQALFPACVL 233 NK+ + YG+ + D IGC +D++ + F +NG LG AF I +PA L Sbjct 195 WNKEAEPYGQSWVAGDVIGCCIDLNCDEIYFYRNGVSLGAAFTGIRKLGPGFGYYPAISL 254 Query 234 -KNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIV 292 + + NFG FK+P DGF L +AP + + L L+ Sbjct 255 SQGERCELNFGAYPFKYPV-DGFQPLQEAPTRFSFAT------------ELLRCFSRLLD 301 Query 293 EPSRELAEQTLNNIKQFKK 311 P R LA+ TL+ +++F Sbjct 302 RPDRSLAD-TLSRLRRFAS 319 >sp|A5E5F7|MRH4_LODEL ATP-dependent RNA helicase MRH4, mitochondrial OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) OX=379508 GN=MRH4 PE=3 SV=1 Length=603 Score = 161 bits (406), Expect = 2e-40, Method: Composition-based stats. Identities = 79/460 (17%), Positives = 159/460 (35%), Gaps = 91/460 (20%) Query 209 GKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVK 268 G+ + + + + +F + + + +D + +++P+ Y Sbjct 183 GERIQIELQTKNEEQKTKIFTVAAETGSGKTWAYLANIMSKLKEDDYKWFNQSPEAY--- 239 Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI--------------- 313 + + ++ +++I+ P+ EL EQ +K+ ++ Sbjct 240 ----NSFKSSE------QVRSVILLPTHELVEQVYETLKRANSFLLEYENVPLQYKEFLN 289 Query 314 ----DNPKLRELLIIGGVAARDQLSVLENG--VDIVVGTPGRLDDLVSTGKLN-----LS 362 L + G A + L N +DI++ TPG++ ++ Sbjct 290 LPEHHTLGLSIAKLSHGDAPINVYKQLRNRGKIDILITTPGKITSFSKLESIDRPFKIFK 349 Query 363 QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKI 422 +R+ V+DEAD L + + P K L +I+ SAT+ K L Sbjct 350 SIRYCVIDEADTLFDDSFLKDTTAVVKNFP------KLLDLILVSATIPKEFEKTLLRLF 403 Query 423 MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSP 482 + + + P ++ + + + D +P Sbjct 404 PDQKSLIRV----------------ATPSLHKISKNIKVMTLDAD------------LAP 435 Query 483 EMWSEAIKILKGEYAV--RAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 S+ + + YA+ + + + + IIF K + D L + + Sbjct 436 YNGSKTRCLAQAIYAISKDGTEHNHVKRIIIFVNEKAEVDGLVDLLQSK-----YHIRRE 490 Query 541 SCVCLHGDRKPHERKQNLERFKK-----------GDVRFLICTDVAARGIDIHGVPYVIN 589 + G +RK LE F K ++ L+ TD+ ARG++ G+ VI Sbjct 491 DICGISGSVNVGDRKDYLEPFLKPAQLLEDDVDQSKIKILVTTDLLARGMNFIGIKNVIL 550 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + LP VHR+GR GR ++G +V + K W Sbjct 551 MGLPKSSVELVHRLGRTGRMNQLGRVFIIVDKKSRKSWVK 590 >sp|Q6BV94|MRH4_DEBHA ATP-dependent RNA helicase MRH4, mitochondrial OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=MRH4 PE=3 SV=1 Length=593 Score = 158 bits (399), Expect = 1e-39, Method: Composition-based stats. Identities = 74/396 (19%), Positives = 148/396 (37%), Gaps = 84/396 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKK---------------------YIDNP------KLR 319 +++I+ P+ EL EQ +++K+ K Y+ P L Sbjct 232 IRSVILLPTHELVEQVYDSLKRASKASIDLEASVNKKILQDPQYARYLSLPENQTSLNLN 291 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN-----LSQVRFLVLDEADG 374 + G + + +D++V TP ++ L ++ + V + V+DEAD Sbjct 292 VVKWGSGDSHQKLFDAGRKRIDVLVTTPAKIQGLAKLNNVSRPFRLFNFVEYCVVDEADT 351 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 L+ + + + ++ + +I CSAT+ K L + + +++ Sbjct 352 LMDKSWIVDTTSVIRRLSKCKD------LIFCSATIPKEFKKTLGKMFPDEFSIINI--- 402 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 V P ++ +++ I SP S+ + + Sbjct 403 -------------VTPSLHKIPKQINLKVI------------DAQLSPYNGSKTRCLAQA 437 Query 495 EYAVR--AIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 YA+ ++ + + ++F K D L I++ G ++ + + G Sbjct 438 LYAIHNDGTEQGYVKRILVFVNEKRDVQPLADTLIEKFGHREE-----DIIGITGADNAD 492 Query 553 ERKQNLERFKK-----------GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 +R +E F K V+ LI TD+ ARG++ +G+ VI + LP+ + VH Sbjct 493 DRLAKIEPFLKPAELLEEDLDGSKVKVLITTDLLARGLNFNGIKNVILMDLPNTSVDLVH 552 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 R+GR GR + G ++ + K W K Sbjct 553 RVGRTGRMRQSGRVFVIIDKKTGKSWIKGLPKVIKK 588 Score = 42.8 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 54/170 (32%), Gaps = 59/170 (35%) Query 1 MAAFSEMGVMPEIAQA-VEEMDW----------------LLPTDIQAESIPLI------- 36 + +F + + P + A +EE+ + + P+ +Q +I I Sbjct 94 ITSFESLRIFPTVRSAMLEEIKYGYNLKSTYIKSKEELEIKPSPVQIAAIRKINQPRLRN 153 Query 37 -----------LGGGDVL----------------MAAETGSGKTGAFSIPVIQIVYE--- 66 G ++L +AAETGSGKT A+ P++ + E Sbjct 154 VNAEKKLADKKASGQEILEDLQKSNEMNRLKIFTIAAETGSGKTWAYLAPLLSKLKEEDM 213 Query 67 -----TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 + + + KK ++ YD + S L Sbjct 214 RVFNMSEQSYADAKKTSIIRSVILLPTHELVEQVYDSLKRASKASIDLEA 263 >sp|Q9FVV4|RH55_ARATH DEAD-box ATP-dependent RNA helicase 55 OS=Arabidopsis thaliana OX=3702 GN=RH55 PE=3 SV=1 Length=465 Score = 154 bits (388), Expect = 6e-39, Method: Composition-based stats. Identities = 66/310 (21%), Positives = 117/310 (38%), Gaps = 80/310 (26%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 + P+ +I+ P+REL+ Q + + +D K RE+ D ++ Sbjct 81 RSNSYPPKPHQVMGVIISPTRELSAQIHKVARAVR--LDFAKCREV-------EADMNTL 131 Query 336 LENGVDIVVGTPGRLDDLVSTGK-LNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 E G ++++GTPGRL D++ + L+ + L+LDEAD LL G+ +N + +++P Sbjct 132 EEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLP-- 189 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 K+ + + SAT + V L++ + P ++ + + VH ++ N K Sbjct 190 ----KQRRTGLFSAT-QTQAVADLAKAGLRNP-YLKCEADQKSSQLVHLLIENKNKKLVV 243 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 + + +Y I + ++I F Sbjct 244 FF--------------------------------MTCACVDYWGLVISKIPSLKSISFFP 271 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 T HG R L F + L+CTDV Sbjct 272 T------------------------------HGKMDQKGRDTALASFTEASSGVLLCTDV 301 Query 575 AARGIDIHGV 584 AARG+DI G+ Sbjct 302 AARGLDIPGI 311 Score = 90.2 bits (222), Expect = 1e-17, Method: Composition-based stats. Identities = 27/96 (28%), Positives = 47/96 (49%), Gaps = 5/96 (5%) Query 4 FSEM--GVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 FSE+ + +I +A++ + + T +QAE+IP + DV++ A TGSGKT AF +P I Sbjct 17 FSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFI 76 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD 97 +I+ + K + S + + Sbjct 77 EII---RRSNSYPPKPHQVMGVIISPTRELSAQIHK 109 >sp|Q7SFC8|ROK1_NEUCR ATP-dependent RNA helicase rok1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=drh-16 PE=3 SV=1 Length=781 Score = 157 bits (398), Expect = 7e-39, Method: Composition-based stats. Identities = 79/366 (22%), Positives = 125/366 (34%), Gaps = 40/366 (11%) Query 339 GVDIVVGTPGRLDDLVSTG----------KLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 VDI+V TP L + + G K L V+ L+LDEAD LL + + Sbjct 393 RVDILVTTPKILLNFLCGGEKEKGKPRIIKKTLPTVQSLILDEADVLLDPIFRKQTMGIW 452 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 L + SAT+ S L++ I E + + VV Sbjct 453 RAC-----THPNLGMTCWSATMASNIEALLTKHIDKRAKR---TPEQTPKPLIRLVVGLK 504 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 + + +L + + A +S + Sbjct 505 DTAVPNITHKLIYTATEPGKLLALRQLLHPVSSADSGPPLRPPF---------------- 548 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 ++F +T L + P + G LH R + + RF+ G+V Sbjct 549 -LVFTQTIERAQALHDEL--KYDIPLEAGGSARVAVLHSSLPDSVRSKIMARFRSGEVWV 605 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATEKEKVW 627 LI TDV ARG+D GV V+N +P YVHR GR GRA R G+A++ + Sbjct 606 LITTDVLARGVDFAGVNGVVNYDVPVSAAAYVHRAGRTGRAGREGGVAVTFYTKDDIPFV 665 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 V + D T+ + + + + L E K+ V + + Sbjct 666 KSVANVIAMSEKQAGKDIDEKDTVKAAQGSVQKWLLDALPKVAK--EDKRKLKVRGVESR 723 Query 688 VTYGQK 693 T G+ Sbjct 724 RTGGKA 729 Score = 75.2 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 23/130 (18%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLIL------------------G 38 + +F E+ G+ P +A + + +PT++Q S+PL L Sbjct 179 LNSFGELKYTYGIHPVLADNITRQGFRVPTEVQMGSLPLQLRPEMALEKATDVEDVKVEK 238 Query 39 GGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGAS-VLNKWQMNPYD 97 G D L A TGSGKT +F IP I + + + + + ++ + + Sbjct 239 GIDFLGVAPTGSGKTISFLIPAIDAIIKRRAEDYTPETDEHVLQAIVVAPTRELASQIVN 298 Query 98 RGSAFAIGSD 107 G AIG+ Sbjct 299 EGRKLAIGTG 308 Score = 45.9 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 40/115 (35%), Gaps = 11/115 (10%) Query 215 AFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN 274 F +P P + L+ E+ K F+ ++ G + Sbjct 203 GFRVPTE-VQMGSLPLQLRPEMALEKATDVEDVKVEKGIDFLGVAPTGSGKTISFLIPAI 261 Query 275 AQVTQTKFLPNAP-------KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 + + + P +A++V P+RELA Q +N ++ +R +L Sbjct 262 DAIIKRRAEDYTPETDEHVLQAIVVAPTRELASQIVNEGRKLA---IGTGVRVVL 313 >sp|Q755C5|MRH4_EREGS ATP-dependent RNA helicase MRH4, mitochondrial OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MRH4 PE=3 SV=1 Length=554 Score = 153 bits (387), Expect = 3e-38, Method: Composition-based stats. Identities = 74/402 (18%), Positives = 135/402 (34%), Gaps = 96/402 (24%) Query 269 SQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 Q A + + A ++LI+ P+ EL EQ +++ ++ + +L+ + Sbjct 182 KQEEQAAGTEEGRARLGALRSLILVPTHELVEQVYMTLEKLQEPL---QLKTFKLDRDTP 238 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN-----LSQVRFLVLDEADGLLSQGYSDF 383 +D + + VDI+V TPG+L L L+ LSQVRF V+DEAD L+ Q + Sbjct 239 YKDIVEAFKGRVDIMVTTPGKLRGLFKIRMLHRPDRILSQVRFAVVDEADTLMDQSWVQE 298 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 + ++ CSA++ + +K K+ Sbjct 299 TYSCIKSLRDANH------LVFCSASVP-MEFEKAMNKLFPN------------------ 333 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV--RAI 501 + + + + H+ A P S+ + + YA+ Sbjct 334 ------------LQVVASEKLHRINKHSNIKIINVALRPYNGSKMKALAQALYAIMKDGT 381 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 E + ++F +++ + G L G+ +R + F Sbjct 382 SEGYEKRCVVFVNEADSVNSIVDTLRDKFG--------HDVHGLTGEHSLDDRLATIAPF 433 Query 562 KKGDVRF-----------------------------------------LICTDVAARGID 580 + R L+ TDV +RGI+ Sbjct 434 MRSPPRIQDQVRPSELKKPQERRLPNSNIKVADSKDNGQRSVSSPLKVLVTTDVLSRGIN 493 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 GV +VI +P + + VHR+GR R G V + Sbjct 494 FKGVKHVILYDVPAKSIDLVHRVGRTSRMNERGHVYIFVGKK 535 Score = 50.5 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 54/154 (35%), Gaps = 22/154 (14%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESI---------PLILGGGDVLMAAETGSGKTGA 55 + G+ + A + + PT IQ I P L ++AAETGSGKT + Sbjct 118 EDCGLDDKRVAAF--LGQVQPTPIQTAVIKKMAKTLMEPQ-LQVH--MVAAETGSGKTMS 172 Query 56 FSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSRE 115 + +P++ + Q+E G + L + P + + + Sbjct 173 YLMPLVDYL-----KQEEQAAGTEEGRARLGALRSLILVPTHELVEQVYMTLEKLQEPLQ 227 Query 116 VKEWHGCRATK---GLMKGKHYYEVSCHDQGLCR 146 +K + R T + K ++ G R Sbjct 228 LKTFKLDRDTPYKDIVEAFKGRVDIMVTTPGKLR 261 >sp|Q8VDM6|HNRL1_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Mus musculus OX=10090 GN=Hnrnpul1 PE=1 SV=1 Length=859 Score = 156 bits (393), Expect = 4e-38, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 100/201 (50%), Gaps = 29/201 (14%) Query 97 DRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCH-------------DQG 143 DR S + + +G W G RA+ G+ +G+ +E+ + D Sbjct 228 DRSSGYPLTIEGFAYL------WSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH 281 Query 144 LCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKG-- 201 + R+GWS S LG + F +G+GGTGKKS N +F+NYG++F +D IGC+ D + G Sbjct 282 VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND 341 Query 202 -HVKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEEFKF------PPKD 253 + F+KNGK +G+AF I + QAL+P ++KN ++FNFG+ + Sbjct 342 VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCSVLPGFTFI 401 Query 254 GFVALSKAPDGYIVKSQHSGN 274 + LS+ G I + Sbjct 402 QHLPLSERIRGTIGPKSKAEC 422 >sp|Q9BUJ2|HNRL1_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 1 OS=Homo sapiens OX=9606 GN=HNRNPUL1 PE=1 SV=2 Length=856 Score = 156 bits (393), Expect = 4e-38, Method: Composition-based stats. Identities = 59/170 (35%), Positives = 93/170 (55%), Gaps = 23/170 (14%) Query 97 DRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCH-------------DQG 143 DR S + + +G W G RA+ G+ +G+ +E+ + D Sbjct 227 DRSSGYPLTIEGFAYL------WSGARASYGVRRGRVCFEMKINEEISVKHLPSTEPDPH 280 Query 144 LCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKG-- 201 + R+GWS S LG + F +G+GGTGKKS N +F+NYG++F +D IGC+ D + G Sbjct 281 VVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFADFECGND 340 Query 202 -HVKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEEEFKF 249 + F+KNGK +G+AF I + QAL+P ++KN ++FNFG+ + Sbjct 341 VELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPY 390 >sp|P75335|Y443_MYCPN Probable ATP-dependent RNA helicase MG308 homolog OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=MPN_443 PE=3 SV=1 Length=409 Score = 150 bits (378), Expect = 5e-38, Method: Composition-based stats. Identities = 77/447 (17%), Positives = 145/447 (32%), Gaps = 87/447 (19%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 FK P+ V +++ G + Q N P+A++ P++EL Q L + Sbjct 27 FKVWPRQNVVGIAETGSGKTFAYLLPA---LNQIDVTLNKPQAVVFVPTKELKWQILTIL 83 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRF 366 K K+ + ++V L+ + +++ Sbjct 84 NDIKASFTGLKVS--------------ENFNSNAHLIVS-------LIGKDIILHETIKY 122 Query 367 LVLDEADGLLSQGYS-DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 +V DE D L ++IN + G SATL + ++++ +++ Sbjct 123 VVFDEVDMFLEDSSQAEWINCVQLFQKHKPHFG------FFSATLFNEQLQQIRKQVAPL 176 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 T V+ K V H ++ +N + Sbjct 177 -TVVNQKKRAWKHSLVKHFLLNLNGQEP-------------------------------- 203 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + + H +Q ++FC L +Q S L Sbjct 204 --------FAGLLALLNYHHNEQVLVFCSNAKSLKQLTSLL---------AHNQLSFKSL 246 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 HG P+ERK VR L+ +D+ ARGID+ VI+ LP Y+HR GR Sbjct 247 HGQLTPNERKHIFTSAANNTVRVLVVSDLLARGIDLPHFSVVISWDLPLVDSFYIHRSGR 306 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE---I 662 V R G + + + + KG + + T+ + +++ + + Sbjct 307 VARFNSWGNSYVFDLPHNQ---HKLTKFAHKGILFNSVHLERDGTLKFPQLKQSKQKPAV 363 Query 663 EEHLNCTISQVEPDIKVPVDEFDGKVT 689 L I +++ K + + Sbjct 364 SSELKTAIKRIKAGYKKVKPNYKKRQK 390 Score = 47.8 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 22/124 (18%), Positives = 39/124 (31%), Gaps = 16/124 (13%) Query 7 MGVMPEIAQAVEEMDWLLPTDIQ---AESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 M + + ++ + + IQ + P +V+ AETGSGKT A+ +P + Sbjct 1 MHFIQPLQAFLQTKHIVEFSSIQQAVFKVWP----RQNVVGIAETGSGKTFAYLLPALNQ 56 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + TL Q + + + GL H Sbjct 57 IDVTLNKPQ---------AVVFVPTKELKWQILTILNDIKASFTGLKVSENFNSNAHLIV 107 Query 124 ATKG 127 + G Sbjct 108 SLIG 111 >sp|Q54VF1|DDX56_DICDI Probable ATP-dependent RNA helicase ddx56 OS=Dictyostelium discoideum OX=44689 GN=ddx56 PE=3 SV=1 Length=685 Score = 154 bits (388), Expect = 8e-38, Method: Composition-based stats. Identities = 72/380 (19%), Positives = 139/380 (37%), Gaps = 71/380 (19%) Query 197 DIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFV 256 D+ F + +GL I +K ++++ + + + Sbjct 17 DLIDLECTF----ESMGLDNRILRALKKMGFQNPSLVQSKSIPLSL--------QGKDIL 64 Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPN--APKALIVEPSRELAEQTLNNIKQFKKYID 314 A ++ G +V K N KA+++ P+REL EQ N+ Q Y Sbjct 65 AKARTGSGKTAAYSIPIIQKVLMAKEKSNIKGVKAVVLVPTRELCEQVKNHFNQVSYYCQ 124 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL-SQVRFLVLDEAD 373 + + + +Q +L + D++V TP RL + + L S + LV+DEAD Sbjct 125 Q-LVSVVQLGNDKTLDEQKGLLRDIPDVIVSTPTRLVQHLENKTIQLQSTLDILVIDEAD 183 Query 374 GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKG 433 +L+ G+ + IN + + +P+V Q + SATL +V++L + ++H P + L+ Sbjct 184 LVLNYGHQNDINIIKSFLPKV------CQCFLMSATLTK-EVEELKKLVLHTPAVLKLEE 236 Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 + ++ + + +E K L Sbjct 237 DKAIQTNLSEYSIKC-------------------------------------AEVDKFLL 259 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 +R + + F +C L+ +F + C L+ + + Sbjct 260 VFSLLRL--RLMQGKILFFVNDTNNCYKLKLFFERF---------HIKCAVLNSELPINS 308 Query 554 RKQNLERFKKGDVRFLICTD 573 R + +F KG +LI TD Sbjct 309 RHDIILQFNKGLFDYLIATD 328 Score = 101 bits (252), Expect = 5e-21, Method: Composition-based stats. Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 1/100 (1%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F MG+ I +A+++M + P+ +Q++SIPL L G D+L A TGSGKT A+SIP+IQ Sbjct 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQ 83 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAF 102 V K++ K K + L + N +++ S + Sbjct 84 KVL-MAKEKSNIKGVKAVVLVPTRELCEQVKNHFNQVSYY 122 Score = 92.9 bits (229), Expect = 3e-18, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 38/78 (49%), Gaps = 0/78 (0%) Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 ARGID V V+N P +NY+HRIGR R G+A+S V E++ V +R Sbjct 427 VARGIDFRNVDIVVNFDFPRTIKNYIHRIGRTARGTNKGIALSFVTYHNEELLKKVSKTR 486 Query 635 GKGCYNTRLKEDGGCTIW 652 G YN + E I Sbjct 487 GDAGYNLKPFEFKMNAIE 504 >sp|Q0U397|MRH4_PHANO ATP-dependent RNA helicase MRH4, mitochondrial OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=MRH4 PE=3 SV=2 Length=658 Score = 152 bits (383), Expect = 3e-37, Method: Composition-based stats. Identities = 78/373 (21%), Positives = 133/373 (36%), Gaps = 65/373 (17%) Query 284 PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVD 341 P P+A+I+ PS EL Q K + K R I ++A + L E GVD Sbjct 311 PARPRAIILVPSAELVAQVGAVAKSLSHTV---KFRAAPISAKMSATVIRNQLFNEKGVD 367 Query 342 IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 +V+ TP L + + L++V L+ DEAD L + + + + Sbjct 368 VVISTPPLLASIAESNPNILARVTHLICDEADSLFDRSFKPSTTEILE-----RATPSLK 422 Query 402 QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 Q+I+CSAT+ + K L+++ + ++P V VV VN + L Sbjct 423 QLILCSATIPKYLDKYLADRF-PDMNRLVTPNLHAIPRRVQLGVVDVNKDPYHGNKNLAC 481 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + + P + + ++F + D + Sbjct 482 ADTIWQIGRSTGEYDPAEGKEAV--------------------PTKRILVFVNEREDTEK 521 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV--------------- 566 + QY + +G + H D P + + L F D Sbjct 522 VAQYLMSKG---------IDALAFHRDTDPSRQAKTLASFTGSDTSTAIKSSPDAPPKPE 572 Query 567 ----------RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 + ++ TD+ +RGID V +VI +P +++HR+GR GR R G I Sbjct 573 LASKRTLANTKVIVTTDLGSRGIDTVSVRHVILYDVPHTTIDFIHRLGRTGRMGRRGRGI 632 Query 617 SLVATEKEKVWYH 629 L+ Sbjct 633 VLLGPGDRADVVK 645 Score = 56.3 bits (134), Expect = 9e-07, Method: Composition-based stats. Identities = 23/97 (24%), Positives = 50/97 (52%), Gaps = 20/97 (21%) Query 3 AFSEMGVMPEIAQAVEE----MDWLLPTDIQAESIPLILG---------------GGDV- 42 +F +M ++ + A+++ +++ PT Q+ ++P +LG G + Sbjct 183 SFDKMPLLDTVQAAIKDALPALEYRSPTPAQSVAVPALLGLEAKKRTKATSTKKGGPEAF 242 Query 43 LMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKT 79 L+AAETGSGKT A+ +P + + + + ++E + + Sbjct 243 LLAAETGSGKTLAYLLPTLDAIKKAEQQEKEDAEAQA 279 >sp|A4QTC6|MRH4_PYRO7 ATP-dependent RNA helicase MRH4, mitochondrial OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=MRH4 PE=3 SV=1 Length=651 Score = 151 bits (382), Expect = 4e-37, Method: Composition-based stats. Identities = 88/438 (20%), Positives = 161/438 (37%), Gaps = 74/438 (17%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 LA E L PA E E P + + K+ S Sbjct 245 LAAETGSGKTLAYLVPAFN--------ALKEAEASDPDIIAYNQRRAEERALLAKNPGSK 296 Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 + + P+ +I+ P+ EL +Q K K R +I ++A Sbjct 297 IKTRPEPHPTMSRPRVVILVPTAELVDQVGRVAKSLSH---VAKARTRMISANMSATMIE 353 Query 334 SVLEN--GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ- 390 + + + G+DI++ TP L + + LS+V LV+DEAD LL + +S+ + ++ Sbjct 354 NDVFSPAGIDILISTPHLLASIAESHPNILSRVSHLVVDEADSLLDRSFSEVTTPIIDRA 413 Query 391 IPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP 450 +P + Q+++CSAT+ L+ + + ++P V V+ V Sbjct 414 LPSI------RQLVLCSATIPRRLDNYLASRF-PNMRRITTPNLHAIPRRVQLGVIDVAR 466 Query 451 KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 R + + A + +WS + + E V+ + + + + Sbjct 467 DPYRGNKNI-------------------ACADAIWSIGKEAGRHEGPVKG--QVDVRRIM 505 Query 511 IFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV---- 566 +F + + +Y +G V LH D + + L F + Sbjct 506 VFVNEREKTQEVAEYLKSKG---------IDAVALHRDTSEERQSEMLASFTSNETMSIP 556 Query 567 -------------------RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 + ++ TD+A+RGID V +V+ +P +++HR+GR G Sbjct 557 TPEGGVAGSPRSSRTLPNTKVIVATDLASRGIDTLAVRHVVLYDVPHTTIDFIHRLGRAG 616 Query 608 RAERMGLAISLVATEKEK 625 R R G I LV + K Sbjct 617 RMGRRGRGIVLVGNDDRK 634 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 24/102 (24%), Positives = 43/102 (42%), Gaps = 36/102 (35%) Query 1 MAAFSEMGVMPE-----IAQAVEEMDWLLPTDIQAESIPLILG----------------- 38 + +F + ++P+ + +A++ M + PT +Q +IP +LG Sbjct 166 VDSFDQFDLLPQVKDAVLNEALKGMLDIKPTPVQRLAIPALLGQTTGARSRWRTKSKPAD 225 Query 39 --------------GGDVLMAAETGSGKTGAFSIPVIQIVYE 66 + L+AAETGSGKT A+ +P + E Sbjct 226 SGSEAASPDAPPPPREEFLLAAETGSGKTLAYLVPAFNALKE 267 >sp|Q00839|HNRPU_HUMAN Heterogeneous nuclear ribonucleoprotein U OS=Homo sapiens OX=9606 GN=HNRNPU PE=1 SV=6 Length=825 Score = 151 bits (381), Expect = 1e-36, Method: Composition-based stats. Identities = 54/211 (26%), Positives = 101/211 (48%), Gaps = 20/211 (9%) Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE-- 118 + + E + + + + ++ Y+ F I D L S ++ Sbjct 258 FEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFA 317 Query 119 --WHGCRATKGLMKGKHYYEVSCHDQ-------------GLCRVGWSTMQASLDLGTDKF 163 W G RA+ G+ KGK +E+ ++ R+GWS + + LG ++F Sbjct 318 FLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEF 377 Query 164 GFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDI--DKGHVKFSKNGKDLGLAFEIPPH 221 +G+ G K+ N + ++YGE+F +D I C+ + D+ + ++KNG+DLG+AF+I Sbjct 378 SYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFESDEVELSYAKNGQDLGVAFKISKE 437 Query 222 -MKNQALFPACVLKNAELKFNFGEEEFKFPP 251 + + LFP + N ++FNFG++E + P Sbjct 438 VLAGRPLFPHVLCHNCAVEFNFGQKEKPYFP 468 >sp|Q6IMY8|HNRPU_RAT Heterogeneous nuclear ribonucleoprotein U OS=Rattus norvegicus OX=10116 GN=Hnrnpu PE=1 SV=1 Length=798 Score = 150 bits (379), Expect = 2e-36, Method: Composition-based stats. Identities = 54/211 (26%), Positives = 102/211 (48%), Gaps = 20/211 (9%) Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE-- 118 + + E + + + + ++ Y+ F I D L S ++ Sbjct 232 FEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFA 291 Query 119 --WHGCRATKGLMKGKHYYEVSCHDQ-------------GLCRVGWSTMQASLDLGTDKF 163 W G RA+ G+ KGK +E+ ++ R+GWS + + LG ++F Sbjct 292 FLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEF 351 Query 164 GFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDI--DKGHVKFSKNGKDLGLAFEIPPH 221 +G+ G K+ N + ++YGE+F +D I C+ + D+ + ++KNG+DLG+AF+I Sbjct 352 SYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFETDEVELSYAKNGQDLGVAFKISKE 411 Query 222 -MKNQALFPACVLKNAELKFNFGEEEFKFPP 251 + ++ LFP + N ++FNFG++E + P Sbjct 412 VLADRPLFPHVLCHNCAVEFNFGQKEKPYFP 442 >sp|Q8VEK3|HNRPU_MOUSE Heterogeneous nuclear ribonucleoprotein U OS=Mus musculus OX=10090 GN=Hnrnpu PE=1 SV=1 Length=800 Score = 150 bits (379), Expect = 2e-36, Method: Composition-based stats. Identities = 54/211 (26%), Positives = 102/211 (48%), Gaps = 20/211 (9%) Query 61 IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKE-- 118 + + E + + + + ++ Y+ F I D L S ++ Sbjct 234 FEYIEENKYSRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFA 293 Query 119 --WHGCRATKGLMKGKHYYEVSCHDQ-------------GLCRVGWSTMQASLDLGTDKF 163 W G RA+ G+ KGK +E+ ++ R+GWS + + LG ++F Sbjct 294 FLWAGGRASYGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEF 353 Query 164 GFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDI--DKGHVKFSKNGKDLGLAFEIPPH 221 +G+ G K+ N + ++YGE+F +D I C+ + D+ + ++KNG+DLG+AF+I Sbjct 354 SYGYSLKGIKTCNCETEDYGEKFDENDVITCFANFETDEVELSYAKNGQDLGVAFKISKE 413 Query 222 -MKNQALFPACVLKNAELKFNFGEEEFKFPP 251 + ++ LFP + N ++FNFG++E + P Sbjct 414 VLADRPLFPHVLCHNCAVEFNFGQKEKPYFP 444 >sp|Q00PI9|HNRL2_MOUSE Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Mus musculus OX=10090 GN=Hnrnpul2 PE=1 SV=2 Length=745 Score = 147 bits (370), Expect = 2e-35, Method: Composition-based stats. Identities = 58/170 (34%), Positives = 89/170 (52%), Gaps = 17/170 (10%) Query 93 MNPYDRGSAFAIGSDGLCCQSREVKE----WHGCRATKGLMKGKHYYEVS---------- 138 ++ Y F I D Q ++ W G R+T G+ KGK +E Sbjct 246 LDTYTSDLHFQISKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKEG 305 Query 139 CHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDI 198 C + L RVGWS + LG D+F +GF G G K+ N QF+ +G+ F +D IGC+ + Sbjct 306 CTEVSLLRVGWSVDFSCSQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVIGCFANF 365 Query 199 --DKGHVKFSKNGKDLGLAFEIPPH-MKNQALFPACVLKNAELKFNFGEE 245 ++ + FSKNG+DLG+AF I + ++AL P + KN ++ NFG++ Sbjct 366 ETEEVELSFSKNGEDLGVAFRISKESLADRALLPHVLCKNCVVELNFGQK 415 >sp|Q1E9B7|MRH4_COCIM ATP-dependent RNA helicase MRH4, mitochondrial OS=Coccidioides immitis (strain RS) OX=246410 GN=MRH4 PE=3 SV=1 Length=656 Score = 145 bits (365), Expect = 6e-35, Method: Composition-based stats. Identities = 80/375 (21%), Positives = 137/375 (37%), Gaps = 57/375 (15%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIV 343 PKA+I+ P+ EL EQ +KQ + K R L+ R L NG+DI+ Sbjct 295 KPKAIILVPTSELVEQIGRIVKQLAHTV---KYRSALLASNYTPRKIRKTLFNPNGLDIL 351 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TP + + S+V LV+DEAD L + +S N + ++ Q+ Sbjct 352 VTTPYLVASIAEANPYIFSRVTHLVVDEADSLFDKSFSPKTNTIIDRTAPTLK-----QL 406 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 I+CSAT+ +L E+ + ++P V VV ++ + R L + Sbjct 407 ILCSATIPRSLDNRLRERF-PQIRRLVTPNLHAIPRRVQLGVVDIDKEPYRGRRHLACAD 465 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + + + + + + I+F + + Sbjct 466 AIWSIGRSGNPYD-----------------ADVGYQVTGQKEPKSIIVFVNERETAAEVA 508 Query 524 QYFIQQGGGPDKKGHQFSCVC----------------------LHGDRKPHE-------R 554 ++ + +G S L G+R + R Sbjct 509 EFLVTKGINAVSLTRDTSEKRQAQILAEFTTEKNPPQPEDYKMLKGNRSDDDSVPFVNVR 568 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGL 614 N + + + L+ TD+ +RGID V VI +P +++HR+GR+GR R G Sbjct 569 PGNERSNRLSNTKVLVVTDLGSRGIDTVAVKTVILYDVPHSTIDFIHRLGRLGRMGRRGR 628 Query 615 AISLVATEKEKVWYH 629 I LV + K Sbjct 629 GIVLVGKKDRKDVVR 643 Score = 67.5 bits (163), Expect = 2e-10, Method: Composition-based stats. Identities = 28/94 (30%), Positives = 48/94 (51%), Gaps = 22/94 (23%) Query 1 MAAFSEMGVMPEIAQAVEE-----MDWLLPTDIQAESIPLIL-GG----------GDV-- 42 + +F + ++P + Q+V + ++++ PT IQ +IP IL G D+ Sbjct 156 ITSFDQFDLLPSVRQSVYDSALPGLEYVTPTPIQRLAIPAILRQGSATPKPEEGQEDMPR 215 Query 43 ----LMAAETGSGKTGAFSIPVIQIVYETLKDQQ 72 L+AAETGSGKT A+ +PV+ + T + Sbjct 216 FDQYLLAAETGSGKTLAYLLPVVDAIKRTEAKDK 249 >sp|Q5R881|RSPRY_PONAB RING finger and SPRY domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSPRY1 PE=2 SV=1 Length=576 Score = 142 bits (359), Expect = 2e-34, Method: Composition-based stats. Identities = 43/208 (21%), Positives = 79/208 (38%), Gaps = 13/208 (6%) Query 93 MNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTM 152 +N D I GL + + R T + G YYEV+ G+ ++GW+T Sbjct 322 LNSNDVSEYLKISPHGLEA-RCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATR 380 Query 153 QASLD------LGTDKFGFGFGGTGKKSH--NKQFDNYGEEFTMHDTIGCYLDIDKGHVK 204 + +G D++ + G + + + + DT+G LD+++ + Sbjct 381 DSKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARSKPHIHPCWKEGDTVGFLLDLNEKQMI 440 Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSK---- 260 F NG L ++ + A + + +FNFG + FK+PP F + Sbjct 441 FFLNGNQLPPEKQVFSSTVSGFFAAASFMSYQQCEFNFGAKPFKYPPSMKFSTFNDYAFL 500 Query 261 APDGYIVKSQHSGNAQVTQTKFLPNAPK 288 + I+ +H A + Q N Sbjct 501 TAEEKIILPRHRRLALLKQVSIRENCCS 528 >sp|Q96DX4|RSPRY_HUMAN RING finger and SPRY domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSPRY1 PE=1 SV=1 Length=576 Score = 142 bits (359), Expect = 2e-34, Method: Composition-based stats. Identities = 43/208 (21%), Positives = 79/208 (38%), Gaps = 13/208 (6%) Query 93 MNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTM 152 +N D I GL + + R T + G YYEV+ G+ ++GW+T Sbjct 322 LNSNDVSEYLKISPHGLEA-RCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATR 380 Query 153 QASLD------LGTDKFGFGFGGTGKKSH--NKQFDNYGEEFTMHDTIGCYLDIDKGHVK 204 + +G D++ + G + + + + DT+G LD+++ + Sbjct 381 DSKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARSKPHIHPCWKEGDTVGFLLDLNEKQMI 440 Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSK---- 260 F NG L ++ + A + + +FNFG + FK+PP F + Sbjct 441 FFLNGNQLPPEKQVFSSTVSGFFAAASFMSYQQCEFNFGAKPFKYPPSMKFSTFNDYAFL 500 Query 261 APDGYIVKSQHSGNAQVTQTKFLPNAPK 288 + I+ +H A + Q N Sbjct 501 TAEEKIILPRHRRLALLKQVSIRENCCS 528 >sp|O94761|RECQ4_HUMAN ATP-dependent DNA helicase Q4 OS=Homo sapiens OX=9606 GN=RECQL4 PE=1 SV=2 Length=1208 Score = 144 bits (363), Expect = 3e-34, Method: Composition-based stats. Identities = 90/527 (17%), Positives = 163/527 (31%), Gaps = 102/527 (19%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKA----LIVEPSRE 297 G + F+ + + + +V +G + Q L + ++ L+V P Sbjct 476 LGHQAFRPGQERAVMRILSGISTLLVLPTGAGKSLCYQLPALLYSRRSPCLTLVVSPLLS 535 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIVVGTPGRLDDL 353 L + ++ + P L+ I G+ + + SVL+ V +++ TP + L Sbjct 536 LMDDQVSGL--------PPCLKAACIHSGMTRKQRESVLQKIRAAQVHVLMLTP---EAL 584 Query 354 VSTGKL----NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT 409 V G L L V F +DEA LSQ +F + + +AT Sbjct 585 VGAGGLPPAAQLPPVAFACIDEAH-CLSQWSHNFRPCYLRVCKVLRERMGVHCFLGLTAT 643 Query 410 LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 ++ + + DL G VP +H V L L Sbjct 644 ATRRTASDVA-QHLAVAEEPDLHGPAPVPTNLHLSVSMDRDTDQALLTLLQ--------- 693 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ 529 + +D II+C + D + + Sbjct 694 ------------------------------GKRFQNLDSIIIYCNRREDTERIAALLRTC 723 Query 530 G-----GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 G + + + H ER++ F +G +R ++ T G+D V Sbjct 724 LHAAWVPGSGGRAPKTTAEAYHAGMCSRERRRVQRAFMQGQLRVVVATVAFGMGLDRPDV 783 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLK 644 V+++ LP ++YV +GR GR + + + G+ R Sbjct 784 RAVLHLGLPPSFESYVQAVGRAGRDGQPAHCHLFLQPQ------------GEDLRELRRH 831 Query 645 EDGGCTIWYNEMQLLSEIEEHLNCT--------------ISQVEPDIKVPVDEFDGKVTY 690 T + +L+ + CT V ++ + Sbjct 832 VHADSTDFLAVKRLVQRVFPACTCTCTRPPSEQEGAVGGERPVPKYPPQEAEQLSHQAAP 891 Query 691 GQKRAAGGGSYKGHVDILAP--TVQELAALEKEAQTSFLHLGYLPNQ 735 G +R GH L TVQ L E+ +T +L P+ Sbjct 892 GPRRV-----CMGHERALPIQLTVQALDMPEEAIETLLCYLELHPHH 933 Score = 40.1 bits (92), Expect = 0.083, Method: Composition-based stats. Identities = 14/59 (24%), Positives = 27/59 (46%), Gaps = 0/59 (0%) Query 10 MPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 E+ QA+E++ Q ++ IL G L+ TG+GK+ + +P + + Sbjct 466 PAEVFQALEQLGHQAFRPGQERAVMRILSGISTLLVLPTGAGKSLCYQLPALLYSRRSP 524 >sp|Q1KMD3|HNRL2_HUMAN Heterogeneous nuclear ribonucleoprotein U-like protein 2 OS=Homo sapiens OX=9606 GN=HNRNPUL2 PE=1 SV=1 Length=747 Score = 143 bits (361), Expect = 3e-34, Method: Composition-based stats. Identities = 57/170 (34%), Positives = 89/170 (52%), Gaps = 17/170 (10%) Query 93 MNPYDRGSAFAIGSDGLCCQSREVKE----WHGCRATKGLMKGKHYYEVS---------- 138 ++ Y F + D Q ++ W G R+T G+ KGK +E Sbjct 248 LDTYTSDLHFQVSKDRYGGQPLFSEKFPTLWSGARSTYGVTKGKVCFEAKVTQNLPMKEG 307 Query 139 CHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDI 198 C + L RVGWS + LG D+F +GF G G K+ N QF+ +G+ F +D IGC+ + Sbjct 308 CTEVSLLRVGWSVDFSRPQLGEDEFSYGFDGRGLKAENGQFEEFGQTFGENDVIGCFANF 367 Query 199 --DKGHVKFSKNGKDLGLAFEIPP-HMKNQALFPACVLKNAELKFNFGEE 245 ++ + FSKNG+DLG+AF I + ++AL P + KN ++ NFG++ Sbjct 368 ETEEVELSFSKNGEDLGVAFWISKDSLADRALLPHVLCKNCVVELNFGQK 417 >sp|Q95LP3|RSPRY_MACFA RING finger and SPRY domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=RSPRY1 PE=2 SV=1 Length=576 Score = 142 bits (357), Expect = 3e-34, Method: Composition-based stats. Identities = 43/208 (21%), Positives = 79/208 (38%), Gaps = 13/208 (6%) Query 93 MNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTM 152 +N D I GL + + R T + G YYEV+ G+ ++GW+T Sbjct 322 LNSNDVSEYLKISPHGLEA-RCDASSFESVRCTFCVDAGVWYYEVTVVTSGVMQIGWATR 380 Query 153 QASLD------LGTDKFGFGFGGTGKKSH--NKQFDNYGEEFTMHDTIGCYLDIDKGHVK 204 + +G D++ + G + + + + DT+G LD+++ + Sbjct 381 DSKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARSKPHIHPCWKEGDTVGFLLDLNEKQMI 440 Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSK---- 260 F NG L ++ + A + + +FNFG + FK+PP F + Sbjct 441 FFLNGNQLPPEKQVFSSTISGFFAAASFMSYQQCEFNFGAKPFKYPPSMKFSTFNDYAFL 500 Query 261 APDGYIVKSQHSGNAQVTQTKFLPNAPK 288 + I+ +H A + Q N Sbjct 501 TAEEKIILPRHRRLALLKQVSIRENCCS 528 >sp|Q8BVR6|RSPRY_MOUSE RING finger and SPRY domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rspry1 PE=1 SV=1 Length=576 Score = 141 bits (356), Expect = 4e-34, Method: Composition-based stats. Identities = 43/208 (21%), Positives = 78/208 (38%), Gaps = 13/208 (6%) Query 93 MNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTM 152 +N D I GL + + R T + G YYEV+ G+ ++GW+T Sbjct 322 LNSNDVSEYLKISPHGLEA-RCDASSFESVRCTFCVDTGVWYYEVTVVTSGVMQIGWATR 380 Query 153 QASLD------LGTDKFGFGFGGTGKKSH--NKQFDNYGEEFTMHDTIGCYLDIDKGHVK 204 + +G D++ + G + + + + DT+G LD+++ + Sbjct 381 DSKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARSKPHVHPCWKEGDTVGFLLDLNEKQMI 440 Query 205 FSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSK---- 260 F NG L ++ + A + + +FNFG FK+PP F + Sbjct 441 FFLNGNQLPPEKQVFSSTVSGFFAAASFMSYQQCEFNFGARPFKYPPSMKFSTFNDYAFL 500 Query 261 APDGYIVKSQHSGNAQVTQTKFLPNAPK 288 + I+ +H A + Q N Sbjct 501 TAEEKIILPRHRRLALLKQVSIRENCCS 528 >sp|A7EWH6|MRH4_SCLS1 ATP-dependent RNA helicase mrh4, mitochondrial OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=mrh4 PE=3 SV=1 Length=615 Score = 142 bits (357), Expect = 4e-34, Method: Composition-based stats. Identities = 82/395 (21%), Positives = 149/395 (38%), Gaps = 81/395 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL--ENGVDIVV 344 P+A+I+ P+ EL Q +K F + K + +I + + + L +G+DI+V Sbjct 260 PRAIILVPTSELVTQVGTLLKLFSHTV---KFKAAVISSNFSGKVIRNRLFSPSGIDILV 316 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + + LS+V L++DEAD LL +G+S + + I + T ++L + Sbjct 317 STPHLLSSIADSDPNILSRVTHLIIDEADSLLDRGFSPLTSAI---IDRATPSLEKL--V 371 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +CSAT+ + K + ++P V VV V R Sbjct 372 LCSATIP-RSLDSFLRKRFPDINRLVTPNLHAIPRRVQLGVVDVERDPYR---------- 420 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 N + A + +WS + + V+ + + K + ++F + + Sbjct 421 ---------NNKNLACADTIWSIGKAAAEHDGPVKGLMDVK--RILVFVNEREKTQEVAD 469 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF----------------------- 561 Y + +G + L D + + L F Sbjct 470 YLVSKG---------VDAIALSRDTPEQRQSEMLASFTSPAKLSVEKPVSHPGSLSDNQP 520 Query 562 --------------KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 + + + L+ TD+ +RGID V +VI +P +++HR+GR G Sbjct 521 NYVPFGEVAPPVKRRLPNTKVLVTTDLGSRGIDTVAVRHVILYDVPHSTIDFIHRLGRTG 580 Query 608 RAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 R R G I LV + V +G + + Sbjct 581 RMGRRGRGIVLVGKGDRR---DVVKEVREGMFEGK 612 Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 40/79 (51%), Gaps = 15/79 (19%) Query 1 MAAFSEMGVMPEIAQAVE-----EMDWLLPTDIQAESIPLILGGGD----------VLMA 45 + +F + ++ + QA+ E+ +PT +Q ++P +LG L+A Sbjct 137 VQSFEQFALLDSVKQAIFQQALPELKEHVPTPVQRIAVPALLGDQQSRRPKSEMEQYLIA 196 Query 46 AETGSGKTGAFSIPVIQIV 64 AETGSGKT ++ IP I + Sbjct 197 AETGSGKTLSYLIPTINAI 215 >sp|O13983|HRQ1_SCHPO ATP-dependent helicase hrq1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hrq1 PE=1 SV=4 Length=1063 Score = 142 bits (359), Expect = 9e-34, Method: Composition-based stats. Identities = 90/500 (18%), Positives = 166/500 (33%), Gaps = 61/500 (12%) Query 233 LKNAELKFNFGEEEFKFPPKDGFVALSKAPDGY---IVKSQHSGNAQVTQTKFL-----P 284 L + + + K A++ +G+ + S SG + + Q L Sbjct 295 LSQELINALYTSRNIEKTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSLLED 354 Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDN-PKLRELLIIGGVAARDQLSVLENGVDIV 343 N A V P++ LA+ ++ Y+ +R G + S++ + +I+ Sbjct 355 NQSTAFFVFPTKSLAQDQKKSLIDILSYMPTLKNIRVDTFDGDTPLESRESIIRS-ANII 413 Query 344 VGTPGRLDDLV----STGKLNLSQVRFLVLDEAD---GLLSQGYSDFINRMHNQIPQVTS 396 P L + + ++ VLDEA G+ + + RM +I + Sbjct 414 FTNPDMLHQTILPNANRWYYFFKNLKLFVLDEAHVYNGIFGVHVAFVLRRM-RRIAEYFG 472 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 + + + CSAT+ + + D + + +P + + Sbjct 473 NSQYR-FVSCSATIEDP---------------LQHMKKIFGVDNIKLINYTSSPSGSKKF 516 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 ++ D P SEA K+L R + I+FCR + Sbjct 517 VMWNPPYV--------DPKHPDDGKKSAISEASKLLIKFAEKRV-------RTIVFCRVR 561 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 C++L + Q+ K ER++ G + +I T+ Sbjct 562 KTCESLMRLVRQELKTKQKGDLLSKIQSYRAGYTVQERRKIESEMFNGKLYGIIATNALE 621 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK 636 GIDI + VI + P N + GR GR + LA+ +V T +Y K Sbjct 622 LGIDIGSLDAVITIGFPYSLSNLRQQFGRAGRRNKSSLAVYIVETFPVDQFY------LK 675 Query 637 GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTY--GQKR 694 + + T+ LL+ HL C ++ +I+ F ++ Sbjct 676 HPILIHTQPNAELTLDLTNEVLLA---SHLQCAAYELPINIRSDEKFFGNQIQDICEANL 732 Query 695 AAGGGSYKGHVDILA-PTVQ 713 SY+ H L P Q Sbjct 733 EMVEESYRPHPKYLPFPASQ 752 Score = 42.4 bits (98), Expect = 0.016, Method: Composition-based stats. Identities = 24/143 (17%), Positives = 50/143 (35%), Gaps = 12/143 (8%) Query 8 GVMPEIAQAVEEM-DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 + E+ A+ + QA++I + G V+++ T SGK+ + IP++Q + E Sbjct 294 PLSQELINALYTSRNIEKTYKHQADAINHLWNGFHVIVSTSTSSGKSLIYQIPILQSLLE 353 Query 67 TLKDQ-----------QEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSRE 115 + Q+ KK I + L +++ +D + + + Sbjct 354 DNQSTAFFVFPTKSLAQDQKKSLIDILSYMPTLKNIRVDTFDGDTPLESRESIIRSANII 413 Query 116 VKEWHGCRATKGLMKGKHYYEVS 138 T + YY Sbjct 414 FTNPDMLHQTILPNANRWYYFFK 436 >sp|Q2HCV7|ROK1_CHAGB ATP-dependent RNA helicase ROK1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=ROK1 PE=3 SV=1 Length=667 Score = 137 bits (346), Expect = 1e-32, Method: Composition-based stats. Identities = 91/506 (18%), Positives = 171/506 (34%), Gaps = 82/506 (16%) Query 215 AFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN 274 F +P A P + LK + G + F+A++ G + Sbjct 194 GFRVPTE-VQMASLPLLLQPTTALKKSEGADIPNIDNGADFLAVAPTGSGKTITFLIPAI 252 Query 275 AQVTQTKFL------PNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA 328 V + + + +A++V P+RELA Q +N ++ Sbjct 253 DGVLRRRAEEGRDTDQHVLEAVVVAPTRELATQIVNEGRKLA------------------ 294 Query 329 ARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS-DFINRM 387 +GT R+ + KL++ + V DE L +G + + Sbjct 295 ---------------IGTGVRVVLMKRALKLDVEE----VADEKSKDLEEGSGSEQGSGD 335 Query 388 HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE--KIMHFPTWV--DLKGEDSVPDTVHH 443 + S+G+ + S + K L+ ++ P + L G+ + Sbjct 336 EESEGEEESEGEEGKT--------SKEAKPLARVDILVTTPKILLNFLSGKAGARRLLPS 387 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V + + D L + L + + ++ L ++ ++A +E Sbjct 388 VRSLILDEADVLLDPLFRKQTMAICRACTHPNVALTCWSATMASNVEALVTKHLLQARQE 447 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + L + P + G LH R + + RF+ Sbjct 448 D-----------RQPTPALHDEL--KYDIPLEAGGSARVAVLHSSMADSARSKIMARFRA 494 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM-GLAISLVATE 622 G+V L+ TDV ARG+D GV V+N +P YVHR GR GRA R G+A++ + Sbjct 495 GEVWVLVTTDVLARGVDFAGVNGVVNYDVPTSAAAYVHRAGRTGRAGREGGVAVTFYTKD 554 Query 623 KEKVWYHVCSSR--GKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVP 680 V + + + GG T+ + L ++ + E K+ Sbjct 555 DIPFVKSVANVIAASEKQAGVQADGGGGGTVQKWLLDALPKVAK---------EDKRKLK 605 Query 681 VDEFDGKVTYGQKRAAGGGSYKGHVD 706 V + + T G+ S++ + Sbjct 606 VRGVESRRTGGKATITTKSSWERRRE 631 Score = 79.4 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 49/129 (38%), Gaps = 22/129 (17%) Query 1 MAAFSEM----GVMPEIAQAVEEMDWLLPTDIQAESIPLILG------------------ 38 + +F E+ V P++A + + +PT++Q S+PL+L Sbjct 170 LTSFGELRHTYDVSPQLAANIAAQGFRVPTEVQMASLPLLLQPTTALKKSEGADIPNIDN 229 Query 39 GGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDR 98 G D L A TGSGKT F IP I V ++ + + + Sbjct 230 GADFLAVAPTGSGKTITFLIPAIDGVLRRRAEEGRDTDQHVLEAVVVAPTRELATQIVNE 289 Query 99 GSAFAIGSD 107 G AIG+ Sbjct 290 GRKLAIGTG 298 >sp|Q1LUS8|RBP10_DANRE Ran-binding protein 10 OS=Danio rerio OX=7955 GN=ranbp10 PE=3 SV=1 Length=604 Score = 136 bits (342), Expect = 3e-32, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 90/226 (40%), Gaps = 23/226 (10%) Query 45 AAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAI 104 AE G+G + P E +++ + + + W +P D+ S + Sbjct 1 MAELGAG-SLLTGDPAFNY-QEHELNERLKRLYPAVNEEETPLPRSW--SPKDKYSYIGL 56 Query 105 GSDGLCCQ----SREVKEWHGCRATKGLMK--GKHYYEVSCHDQG---LCRVGWSTMQAS 155 + L + K+ RAT + G +Y+EV +G +G S + Sbjct 57 SQNNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVN 116 Query 156 LDL--GTDKFGFGFGGTGKKSH--NKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKD 211 ++ G DK +G+ G S + YG FT D IGC +++ ++KNG Sbjct 117 MNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHS 176 Query 212 LGLAFEIPPHMKNQALFPACVLKNAE--LKFNFGEEEFKFPPKDGF 255 LG+AF P L+P L+ + NFG++ F F +D Sbjct 177 LGVAFTDLPP----NLYPTVGLQTPGEIVDANFGQQPFVFDIEDYM 218 >sp|A6RCJ9|MRH4_AJECN ATP-dependent RNA helicase MRH4, mitochondrial OS=Ajellomyces capsulatus (strain NAm1 / WU24) OX=2059318 GN=MRH4 PE=3 SV=1 Length=624 Score = 135 bits (339), Expect = 9e-32, Method: Composition-based stats. Identities = 80/345 (23%), Positives = 134/345 (39%), Gaps = 27/345 (8%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVV 344 P+A+I+ P+ EL EQ KQ K R I R + L N G+DI++ Sbjct 292 PRAIILVPTAELVEQVGKLAKQLSH---TAKFRSATISSVYTPRRITNSLFNPAGIDILI 348 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L + T LS+V LV+DEAD LL + +S + + + Q+I Sbjct 349 STPHLLTSIAKTNPYILSRVAHLVIDEADSLLDKSFSPLTYSIMEK-----TAPSLTQLI 403 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +CSAT+ + + EK + ++P V VV V+ R ++L + I Sbjct 404 LCSATIP-RSLDSVMEKKFPEMKRLVTPNLHAIPRRVQLGVVDVDKDPSRGNKKLACADI 462 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 A + + + + + + E + + T + + ++ Sbjct 463 IWSLGKAGEVAAFLSQKGIHTAALSRDTPDQRKDEILAEFTHVKPL---PTPQEVKDAQR 519 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 P + H + + R + L+ TD+ +RGID V Sbjct 520 NKRNWFSDPVPFATGENS---HLGPQRNLRD----------TKVLVTTDLGSRGIDTVAV 566 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 VI +P +++HR+GR GR R G I LV+ + K Sbjct 567 RNVILFDVPHTTIDFIHRLGRTGRMGRRGRGIVLVSKKDRKDVVK 611 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 23/96 (24%), Positives = 41/96 (43%), Gaps = 30/96 (31%) Query 1 MAAFSEMGVMPEIAQAVEEMDWLL-----PTDIQAESIPLIL--------GGG------- 40 + +F + ++P++ +AV + PT IQ +IP +L Sbjct 150 VTSFDQFPLLPQVREAVYANAFPTLTEISPTPIQRVAIPALLRPPISETEKNKRKKKPQE 209 Query 41 ----------DVLMAAETGSGKTGAFSIPVIQIVYE 66 L+AAETG+GKT A+ +P+I + + Sbjct 210 EEEEELFHFDQFLLAAETGTGKTLAYLLPIINWIKQ 245 >sp|Q6VN20|RBP10_HUMAN Ran-binding protein 10 OS=Homo sapiens OX=9606 GN=RANBP10 PE=1 SV=1 Length=620 Score = 134 bits (336), Expect = 2e-31, Method: Composition-based stats. Identities = 48/206 (23%), Positives = 82/206 (40%), Gaps = 21/206 (10%) Query 66 ETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ----SREVKEWHG 121 E ++ + + + W +P D+ + + L + K+ Sbjct 32 EQELSRRLQRLYPAVNQQETPLPRSW--SPKDKYNYIGLSQGNLRVHYKGHGKNHKDAAS 89 Query 122 CRATKGLMK--GKHYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS 174 RAT + G +Y+EV +G +G S +++ G DK +G+ G S Sbjct 90 VRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHS 149 Query 175 H--NKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV 232 + YG FT D IGC +++ G ++KNG LG+AF P L+P Sbjct 150 FCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPA----NLYPTVG 205 Query 233 LKNAE--LKFNFGEEEFKFPPKDGFV 256 L+ + NFG++ F F +D Sbjct 206 LQTPGEIVDANFGQQPFLFDIEDYMR 231 >sp|P69566|RANB9_MOUSE Ran-binding protein 9 OS=Mus musculus OX=10090 GN=Ranbp9 PE=1 SV=1 Length=653 Score = 134 bits (336), Expect = 3e-31, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 122/311 (39%), Gaps = 40/311 (13%) Query 64 VYETLKDQQEGKKG--KTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ----SREVK 117 + E K+ Q K + + W +P D+ S + + L + K Sbjct 65 LNEQEKELQRRLKRLYPAVDEQETPLPRSW--SPKDKFSYIGLSQNNLRVHYKGHGKTPK 122 Query 118 EWHGCRATKGLMK--GKHYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGT 170 + RAT + G +Y+EV +G +G S +++ G DK +G+ G Sbjct 123 DAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGD 182 Query 171 GKKSH--NKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALF 228 S + YG FT D IGC +++ ++KNG LG+AF P L+ Sbjct 183 DGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPP----NLY 238 Query 229 PACVLKNAE--LKFNFGEEEFKFPPKDGFV--------ALSKAPDGYIVKSQHSGNAQVT 278 P L+ + NFG+ F F +D + + P G + ++ Sbjct 239 PTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQAQIDRFPIGDREGEWQTMIQKMV 298 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG--GVAAR--DQL- 333 + + + A +R +QT +++ + ++++L++ G G A QL Sbjct 299 SSYLVHHGYCATAEAFARS-TDQT--VLEELASIKNRQRIQKLVLAGRMGEAIETTQQLY 355 Query 334 -SVLENGVDIV 343 S+LE +++ Sbjct 356 PSLLERNPNLL 366 >sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens OX=9606 GN=RYR1 PE=1 SV=3 Length=5038 Score = 136 bits (341), Expect = 3e-31, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 73/198 (37%), Gaps = 12/198 (6%) Query 55 AFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 A P + V L D+ + + ++ L + N + + C Sbjct 1014 ARRNPRL--VPYRLLDEATKRSNRDSLCQAVRTLLGYGYNIEPPDQEPSQVENQSRCDRV 1071 Query 115 EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGK 172 + + + G+ Y+E G RVGW+ ++ ++LG D+ + F G Sbjct 1072 RIFR---AEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFNGHRG 1128 Query 173 KSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQALF 228 + + + +G + D +GC +D+ + + F+ NG+ D G Sbjct 1129 QRWHLGSEPFGRPWQPGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGFL 1188 Query 229 PACVLKNAEL-KFNFGEE 245 P C L ++ N G++ Sbjct 1189 PVCSLGPGQVGHLNLGQD 1206 Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 36/166 (22%), Positives = 56/166 (34%), Gaps = 28/166 (17%) Query 118 EWHGCRATKGLMKGKHYYEVSCHD--------QGLCRVGWSTMQA------------SLD 157 RA K Y+EV + RVGW+ + Sbjct 646 NIFVGRAEGTTQYSKWYFEVMVDEVTPFLTAQATHLRVGWALTEGYTPYPGAGEGWGGNG 705 Query 158 LGTDKFGFGFGGTGKKSHN--KQFDNYGEEFTM-HDTIGCYLDIDKGHVKFSKNGKDLGL 214 +G D + +GF G + + + + G+ D I C LD+ + F NG + Sbjct 706 VGDDLYSYGFDGLHLWTGHVARPVTSPGQHLLAPEDVISCCLDLSVPSISFRINGCPVQG 765 Query 215 AFEIPPHMKNQALFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FE + FP +++F G EFKF P G+ Sbjct 766 VFE--SFNLDGLFFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAP 809 Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 19/68 (28%), Positives = 33/68 (49%), Gaps = 6/68 (9%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVL---KNAELKFNFGEEEF 247 IGC +D+ G + F+ NGK+ F++ P+ K LFPA + ++F G+++ Sbjct 1514 VIGCLVDLATGLMTFTANGKESNTFFQVEPNTK---LFPAVFVLPTHQNVIQFELGKQKN 1570 Query 248 KFPPKDGF 255 P Sbjct 1571 IMPLSAAM 1578 >sp|Q9PTY5|RANB9_XENLA Ran-binding protein 9 OS=Xenopus laevis OX=8355 GN=ranbp9 PE=2 SV=1 Length=548 Score = 132 bits (332), Expect = 3e-31, Method: Composition-based stats. Identities = 51/206 (25%), Positives = 78/206 (38%), Gaps = 21/206 (10%) Query 86 SVLNKWQMNPYDRGSAFAIGSDGLCCQ----SREVKEWHGCRATKGLMK--GKHYYEVSC 139 W +P D+ S + L + K+ R+T + G Y+EV Sbjct 19 PPPRSW--SPRDKCSYLGLSHGNLRVHYKGHGKTSKDAASVRSTHPIPAACGIFYFEVKI 76 Query 140 ---HDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSH--NKQFDNYGEEFTMHDTI 192 G +G ST +L+ G DK +G+ G S + YG FT D I Sbjct 77 ISKGRDGYMGIGLSTQGVNLNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVI 136 Query 193 GCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE--LKFNFGEEEFKFP 250 GC +++ ++KNG LG+AF P L+P L+ + NFG+ F F Sbjct 137 GCCVNLIDNTCFYTKNGHSLGIAFTDLPP----NLYPTVGLQTPGEVVDANFGQSPFVFD 192 Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQ 276 +D I + +G Q Sbjct 193 IEDYIREWRSKIQAQIERFPVAGEWQ 218 >sp|Q6VN19|RBP10_MOUSE Ran-binding protein 10 OS=Mus musculus OX=10090 GN=Ranbp10 PE=1 SV=2 Length=620 Score = 133 bits (334), Expect = 3e-31, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 21/187 (11%) Query 85 ASVLNKWQMNPYDRGSAFAIGSDGLCCQ----SREVKEWHGCRATKGLMK--GKHYYEVS 138 + W +P D+ + + L + K+ RAT + G +Y+EV Sbjct 51 TPLPRSW--SPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVK 108 Query 139 CHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSH--NKQFDNYGEEFTMHDT 191 +G +G S +++ G DK +G+ G S + YG FT D Sbjct 109 IVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDV 168 Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE--LKFNFGEEEFKF 249 IGC +++ G ++KNG LG+AF P L+P L+ + NFG++ F F Sbjct 169 IGCCVNLINGTCFYTKNGHSLGIAFTDLPA----NLYPTVGLQTPGEIVDANFGQQPFLF 224 Query 250 PPKDGFV 256 +D Sbjct 225 DIEDYMR 231 >sp|A3KMV8|RBP10_BOVIN Ran-binding protein 10 OS=Bos taurus OX=9913 GN=RANBP10 PE=2 SV=1 Length=620 Score = 133 bits (334), Expect = 3e-31, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 21/187 (11%) Query 85 ASVLNKWQMNPYDRGSAFAIGSDGLCCQ----SREVKEWHGCRATKGLMK--GKHYYEVS 138 + W +P D+ + + L + K+ RAT + G +Y+EV Sbjct 51 TPLPRSW--SPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVK 108 Query 139 CHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSH--NKQFDNYGEEFTMHDT 191 +G +G S +++ G DK +G+ G S + YG FT D Sbjct 109 IVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDV 168 Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE--LKFNFGEEEFKF 249 IGC +++ G ++KNG LG+AF P L+P L+ + NFG++ F F Sbjct 169 IGCCVNLINGTCFYTKNGHSLGIAFTDLPA----NLYPTVGLQTPGEIVDANFGQQPFLF 224 Query 250 PPKDGFV 256 +D Sbjct 225 DIEDYMR 231 >sp|Q96S59|RANB9_HUMAN Ran-binding protein 9 OS=Homo sapiens OX=9606 GN=RANBP9 PE=1 SV=1 Length=729 Score = 134 bits (336), Expect = 4e-31, Method: Composition-based stats. Identities = 66/311 (21%), Positives = 122/311 (39%), Gaps = 40/311 (13%) Query 64 VYETLKDQQEGKKG--KTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ----SREVK 117 + E K+ Q K + + W +P D+ S + + L + K Sbjct 140 LNEQEKELQRRLKRLYPAVDEQETPLPRSW--SPKDKFSYIGLSQNNLRVHYKGHGKTPK 197 Query 118 EWHGCRATKGLMK--GKHYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGT 170 + RAT + G +Y+EV +G +G S +++ G DK +G+ G Sbjct 198 DAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGD 257 Query 171 GKKSH--NKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALF 228 S + YG FT D IGC +++ ++KNG LG+AF P L+ Sbjct 258 DGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPP----NLY 313 Query 229 PACVLKNAE--LKFNFGEEEFKFPPKDGFV--------ALSKAPDGYIVKSQHSGNAQVT 278 P L+ + NFG+ F F +D + + P G + ++ Sbjct 314 PTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQAQIDRFPIGDREGEWQTMIQKMV 373 Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIG--GVAAR--DQL- 333 + + + A +R +QT +++ + ++++L++ G G A QL Sbjct 374 SSYLVHHGYCATAEAFARS-TDQT--VLEELASIKNRQRIQKLVLAGRMGEAIETTQQLY 430 Query 334 -SVLENGVDIV 343 S+LE +++ Sbjct 431 PSLLERNPNLL 441 >sp|E9PZQ0|RYR1_MOUSE Ryanodine receptor 1 OS=Mus musculus OX=10090 GN=Ryr1 PE=1 SV=1 Length=5035 Score = 134 bits (338), Expect = 7e-31, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 73/199 (37%), Gaps = 14/199 (7%) Query 55 AFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 A P + V L D+ + + ++ L + N + QSR Sbjct 1016 ARRNPRL--VPYRLLDEATKRSNRDSLCQAVRTLLGYGYNIEPPDQE----PSQVDSQSR 1069 Query 115 -EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTG 171 + + + G+ Y+E G RVGW+ ++ ++LG D + F G Sbjct 1070 GDRARIFRAEKSYAVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADDLAYVFNGHR 1129 Query 172 KKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQAL 227 + + + +G + D +GC +D+ + + F+ NG+ D G Sbjct 1130 GQRWHLGSEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFRDIEIGDGF 1189 Query 228 FPACVLKNAEL-KFNFGEE 245 P C L ++ N G++ Sbjct 1190 LPVCSLGPGQVGHLNLGQD 1208 Score = 50.5 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 36/166 (22%), Positives = 57/166 (34%), Gaps = 28/166 (17%) Query 118 EWHGCRATKGLMKGKHYYEVSCHDQG--------LCRVGWSTMQA------------SLD 157 RA GK Y+EV + RVGW+ + Sbjct 648 NIFVGRAEGSTQYGKWYFEVMVDEVAPFLTAQATHLRVGWALSEGYSPYPGGGEGWGGNG 707 Query 158 LGTDKFGFGFGGTGKKSHN--KQFDNYGEEFTM-HDTIGCYLDIDKGHVKFSKNGKDLGL 214 +G D + +GF G + + + + G+ D + C LD+ + F NG + Sbjct 708 VGDDLYSYGFDGLHLWTGHVARPVTSPGQHLLAPEDVVSCCLDLSVPSISFRINGCPVQG 767 Query 215 AFEIPPHMKNQALFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FE + FP +++F G EFKF P G+ Sbjct 768 VFE--SFNLDGLFFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAP 811 Score = 42.8 bits (99), Expect = 0.013, Method: Composition-based stats. Identities = 19/68 (28%), Positives = 33/68 (49%), Gaps = 6/68 (9%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVL---KNAELKFNFGEEEF 247 IGC +D+ G + F+ NGK+ F++ P+ K LFPA + ++F G+++ Sbjct 1516 VIGCLVDLATGLMTFTANGKESNTFFQVEPNTK---LFPAVFVLPTHQNVVQFELGKQKN 1572 Query 248 KFPPKDGF 255 P Sbjct 1573 IMPLSAAM 1580 >sp|A1L252|RANB9_DANRE Ran-binding protein 9 OS=Danio rerio OX=7955 GN=ranbp9 PE=2 SV=1 Length=597 Score = 132 bits (331), Expect = 7e-31, Method: Composition-based stats. Identities = 49/206 (24%), Positives = 81/206 (39%), Gaps = 21/206 (10%) Query 66 ETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ----SREVKEWHG 121 E +Q+ + + + W +P D+ S + + L + K+ Sbjct 26 EKELNQRLRRLYPAVNEQETPLPRSW--SPKDKFSYIGLSQNNLRVHYKGHGKTPKDAAS 83 Query 122 CRATKGLMK--GKHYYEVSC---HDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKS 174 RAT + G +Y+EV G +G S +++ G DK +G+ G S Sbjct 84 VRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHS 143 Query 175 H--NKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACV 232 + YG FT D IGC +++ ++KNG LG+AF P L+P Sbjct 144 FCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPP----NLYPTVG 199 Query 233 LKNAE--LKFNFGEEEFKFPPKDGFV 256 L+ + NFG+ F F +D Sbjct 200 LQTPGEVVDANFGQHPFVFDIEDYMR 225 >sp|Q28FM1|RANB9_XENTR Ran-binding protein 9 OS=Xenopus tropicalis OX=8364 GN=ranbp9 PE=2 SV=1 Length=548 Score = 131 bits (329), Expect = 9e-31, Method: Composition-based stats. Identities = 51/206 (25%), Positives = 76/206 (37%), Gaps = 21/206 (10%) Query 86 SVLNKWQMNPYDRGSAFAIGSDGLCCQ----SREVKEWHGCRATKGLMK--GKHYYEVSC 139 W +P D+ S + L + K+ R+T + G Y+EV Sbjct 19 PPPRSW--SPRDKCSYLGLSHGNLRVHYKGHGKTSKDAASVRSTHPIPAACGIFYFEVKI 76 Query 140 ---HDQGLCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSH--NKQFDNYGEEFTMHDTI 192 G +G ST +L G DK +G+ G S + YG FT D I Sbjct 77 ISKGRDGYMGIGLSTQGVNLSRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVI 136 Query 193 GCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAE--LKFNFGEEEFKFP 250 GC +++ ++KNG LG+AF P L+P L+ + NFG+ F F Sbjct 137 GCCVNLIDNTCFYTKNGHSLGIAFTDLPP----NLYPTVGLQTPGEVVDANFGQSPFVFD 192 Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQ 276 +D I + G Q Sbjct 193 IEDYIREWRTKIQAQIERFPVGGEWQ 218 >sp|P16960|RYR1_PIG Ryanodine receptor 1 OS=Sus scrofa OX=9823 GN=RYR1 PE=2 SV=2 Length=5035 Score = 134 bits (336), Expect = 1e-30, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 14/199 (7%) Query 55 AFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 A P + V L D+ + + ++ L + N + QSR Sbjct 1015 ARRNPRL--VPYRLLDEATKRSNRDSLCQAVRTLLGYGYNIEPPDQE----PSQVESQSR 1068 Query 115 -EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTG 171 + + + G+ Y+E G RVGW+ ++ ++LG D+ + F G Sbjct 1069 WDRVRIFRAEKSYAVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFNGHR 1128 Query 172 KKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQAL 227 + + + +G + D +GC +D+ + + F+ NG+ D G Sbjct 1129 GQRWHLGSELFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFRDIEVGDGF 1188 Query 228 FPACVLKNAEL-KFNFGEE 245 P C L ++ N G++ Sbjct 1189 LPVCSLGPGQVGHLNLGQD 1207 Score = 48.2 bits (113), Expect = 3e-04, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 70/209 (33%), Gaps = 33/209 (16%) Query 118 EWHGCRATKGLMKGKHYYEVSCHD--------QGLCRVGWSTMQA------------SLD 157 RA K Y+EV + RVGW+ + Sbjct 647 NIFVGRAEGTTQYSKWYFEVMVDEVVPFLTAQATHLRVGWALTEGYSPYPGGGEGWGGNG 706 Query 158 LGTDKFGFGFGGTGKKSHNKQF--DNYGEEFTM-HDTIGCYLDIDKGHVKFSKNGKDLGL 214 +G D + +GF G + + + G+ D + C LD+ + F NG + Sbjct 707 VGDDLYSYGFDGLHLWTGHVPRLVTSPGQHLLAPEDVVSCCLDLSVPSISFRINGCPVQG 766 Query 215 AFEIPPHMKNQALFPACVLK-NAELKFNFGEE--EFKFPPKDGFVALSKAPDGYIVKSQH 271 FE N FP +++F G EFKF P G+ +A + + + Sbjct 767 VFEAFN--LNGLFFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAPCHEA---VLPRERL 821 Query 272 SGNAQVTQTKFLPNAPKALIVEPSRELAE 300 + P P +V PSR L+ Sbjct 822 RLEPIKEYRREGPRGPH--LVGPSRCLSH 848 Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 19/68 (28%), Positives = 33/68 (49%), Gaps = 6/68 (9%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVL---KNAELKFNFGEEEF 247 IGC +D+ G + F+ NGK+ F++ P+ K LFPA + ++F G+++ Sbjct 1515 VIGCLVDLATGLMTFTANGKESNTFFQVEPNTK---LFPAVFVLPTHQNVIQFELGKQKN 1571 Query 248 KFPPKDGF 255 P Sbjct 1572 IMPLSAAM 1579 >sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cuniculus OX=9986 GN=RYR1 PE=1 SV=1 Length=5037 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 14/199 (7%) Query 55 AFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 A P + V L D+ + + ++ L + N + QSR Sbjct 1015 ARRNPRL--VPYRLLDEATKRSNRDSLCQAVRTLLGYGYNIEPPDQE----PSQVENQSR 1068 Query 115 -EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTG 171 + + + G+ Y+E G RVGW+ ++ ++LG D+ + F G Sbjct 1069 WDRVRIFRAEKSYTVQSGRWYFEFEAVTTGEMRVGWARPELRPDVELGADELAYVFNGHR 1128 Query 172 KKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQAL 227 + + + +G + D +GC +D+ + + F+ NG+ D G Sbjct 1129 GQRWHLGSEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGF 1188 Query 228 FPACVLKNAEL-KFNFGEE 245 P C L ++ N G++ Sbjct 1189 LPVCSLGPGQVGHLNLGQD 1207 Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 72/209 (34%), Gaps = 33/209 (16%) Query 118 EWHGCRATKGLMKGKHYYEVSCHD--------QGLCRVGWSTMQA------------SLD 157 RA GK Y+EV + RVGW+ + Sbjct 647 NIFVGRAEGSTQYGKWYFEVMVDEVVPFLTAQATHLRVGWALTEGYSPYPGGGEGWGGNG 706 Query 158 LGTDKFGFGFGGTGKKSHN--KQFDNYGEEFTM-HDTIGCYLDIDKGHVKFSKNGKDLGL 214 +G D + +GF G + + + + G+ D + C LD+ + F NG + Sbjct 707 VGDDLYSYGFDGLHLWTGHVARPVTSPGQHLLAPEDVVSCCLDLSVPSISFRINGCPVQG 766 Query 215 AFEIPPHMKNQALFPACVLK-NAELKFNFGEE--EFKFPPKDGFVALSKAPDGYIVKSQH 271 FE + FP +++F G EFKF P G+ +A + + + Sbjct 767 VFEAFN--LDGLFFPVVSFSAGVKVRFLLGGRHGEFKFLPPPGYAPCHEA---VLPRERL 821 Query 272 SGNAQVTQTKFLPNAPKALIVEPSRELAE 300 + P P +V PSR L+ Sbjct 822 RLEPIKEYRREGPRGPH--LVGPSRCLSH 848 Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 19/68 (28%), Positives = 33/68 (49%), Gaps = 6/68 (9%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVL---KNAELKFNFGEEEF 247 IGC +D+ G + F+ NGK+ F++ P+ K LFPA + ++F G+++ Sbjct 1515 VIGCLVDLATGLMTFTANGKESNTFFQVEPNTK---LFPAVFVLPTHQNVIQFELGKQKN 1571 Query 248 KFPPKDGF 255 P Sbjct 1572 IMPLSAAM 1579 >sp|P0CR10|DBP9_CRYNJ ATP-dependent RNA helicase DBP9 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=DBP9 PE=3 SV=1 Length=627 Score = 129 bits (323), Expect = 9e-30, Method: Composition-based stats. Identities = 76/367 (21%), Positives = 133/367 (36%), Gaps = 71/367 (19%) Query 229 PACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP---- 284 P L ++ + +++F P A+ +G V ++ + T +P Sbjct 23 PFSTLIDSRVLVALADQKFAHPTLVQAKAIPLLLEGKDVLARARTGSGKTAAYIVPAVQK 82 Query 285 ---------------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 A +A+I+ P++ELA Q + K KY D + GG + Sbjct 83 ILEAKADLSPASAEYQATRAIILVPTKELALQVSSFTKNVTKYCDGLVQCVDVAAGGASI 142 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 Q +L + DIV+ TP +L L+ + L+LSQ+ FL +DEAD LLS G+ D + R+ + Sbjct 143 --QRVLLNDKPDIVISTPTKLLSLLQSKSLSLSQLSFLAIDEADLLLSYGFKDDLTRIMD 200 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 +Q + SATL S DV+ + ++ P + L S + + Sbjct 201 PTSGWIPKL-GVQGCLMSATL-SDDVEGIKGLVLRNPAILTLSEPASASSLLSQHYTHTS 258 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + L I +L +R ++ Sbjct 259 ERDKFLL--------------------------------IYVLLKLKLIR-------GKS 279 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIF ++ + Q G C ++ + R +E F +G + Sbjct 280 IIFVNDVERGYRVKLFLEQFG---------VKCCVVNSELPLASRYHVVEEFNRGVYDVV 330 Query 570 ICTDVAA 576 + TD A Sbjct 331 VATDEGA 337 Score = 91.3 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 9/113 (8%) Query 3 AFSEMGVM----PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 +FS+ + A+ + + PT +QA++IPL+L G DVL A TGSGKT A+ + Sbjct 18 SFSQPPFSTLIDSRVLVALADQKFAHPTLVQAKAIPLLLEGKDVLARARTGSGKTAAYIV 77 Query 59 PVIQIVYETLKDQQE-GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 P +Q + E D + + T + + + S+F C Sbjct 78 PAVQKILEAKADLSPASAEYQATRAIILVPTKELAL----QVSSFTKNVTKYC 126 Score = 83.3 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 44/185 (24%), Positives = 64/185 (35%), Gaps = 33/185 (18%) Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT---------- 621 T ARGID VIN LP +Y+HR+GR RA + GLA+S V Sbjct 405 TSSLARGIDFTSASSVINFDLPLTSTSYMHRVGRTARAGQSGLALSFVVPRENWGKDKAV 464 Query 622 ------EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 + EKV+ + R K ++ +KE +E+ L + Sbjct 465 SIKSAEKDEKVFERI-KERVKKESDSEIKEWDWKGRKGEIEGFRYRMEDALKAVTGKRVA 523 Query 676 DIKVPVDEF----DGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGY 731 + + K+ SY H L P Q+ HL + Sbjct 524 EARREEVRRELLNSEKLKSHFAANPLDLSYLRHDAPLHPARQQ------------THLKH 571 Query 732 LPNQL 736 +PN L Sbjct 572 VPNYL 576 >sp|P0CR11|DBP9_CRYNB ATP-dependent RNA helicase DBP9 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=DBP9 PE=3 SV=1 Length=627 Score = 129 bits (323), Expect = 9e-30, Method: Composition-based stats. Identities = 76/367 (21%), Positives = 133/367 (36%), Gaps = 71/367 (19%) Query 229 PACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP---- 284 P L ++ + +++F P A+ +G V ++ + T +P Sbjct 23 PFSTLIDSRVLVALADQKFAHPTLVQAKAIPLLLEGKDVLARARTGSGKTAAYIVPAVQK 82 Query 285 ---------------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA 329 A +A+I+ P++ELA Q + K KY D + GG + Sbjct 83 ILEAKADLSPASAEYQATRAIILVPTKELALQVSSFTKNVTKYCDGLVQCVDVAAGGASI 142 Query 330 RDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 Q +L + DIV+ TP +L L+ + L+LSQ+ FL +DEAD LLS G+ D + R+ + Sbjct 143 --QRVLLNDKPDIVISTPTKLLSLLQSKSLSLSQLSFLAIDEADLLLSYGFKDDLTRIMD 200 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 +Q + SATL S DV+ + ++ P + L S + + Sbjct 201 PTSGWIPKL-GVQGCLMSATL-SDDVEGIKGLVLRNPAILTLSEPASASSLLSQHYTHTS 258 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + L I +L +R ++ Sbjct 259 ERDKFLL--------------------------------IYVLLKLKLIR-------GKS 279 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 IIF ++ + Q G C ++ + R +E F +G + Sbjct 280 IIFVNDVERGYRVKLFLEQFG---------VKCCVVNSELPLASRYHVVEEFNRGVYDVV 330 Query 570 ICTDVAA 576 + TD A Sbjct 331 VATDEGA 337 Score = 91.3 bits (225), Expect = 9e-18, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 9/113 (8%) Query 3 AFSEMGVM----PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSI 58 +FS+ + A+ + + PT +QA++IPL+L G DVL A TGSGKT A+ + Sbjct 18 SFSQPPFSTLIDSRVLVALADQKFAHPTLVQAKAIPLLLEGKDVLARARTGSGKTAAYIV 77 Query 59 PVIQIVYETLKDQQE-GKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC 110 P +Q + E D + + T + + + S+F C Sbjct 78 PAVQKILEAKADLSPASAEYQATRAIILVPTKELAL----QVSSFTKNVTKYC 126 Score = 83.3 bits (204), Expect = 3e-15, Method: Composition-based stats. Identities = 44/185 (24%), Positives = 64/185 (35%), Gaps = 33/185 (18%) Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT---------- 621 T ARGID VIN LP +Y+HR+GR RA + GLA+S V Sbjct 405 TSSLARGIDFTSASSVINFDLPLTSTSYMHRVGRTARAGQSGLALSFVVPRENWGKDKAV 464 Query 622 ------EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 + EKV+ + R K ++ +KE +E+ L + Sbjct 465 SIKSAEKDEKVFERI-KERVKKESDSEIKEWDWKGRKGEIEGFRYRMEDALKAVTGKRVA 523 Query 676 DIKVPVDEF----DGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGY 731 + + K+ SY H L P Q+ HL + Sbjct 524 EARREEVRRELLNSEKLKSHFAANPLDLSYLRHDAPLHPARQQ------------THLKH 571 Query 732 LPNQL 736 +PN L Sbjct 572 VPNYL 576 >sp|Q4Z8K6|RBP9X_DROME Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster OX=7227 GN=RanBPM PE=1 SV=1 Length=962 Score = 125 bits (314), Expect = 3e-28, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 74/178 (42%), Gaps = 19/178 (11%) Query 94 NPYDRGSAFAIGSDGLCCQ----SREVKEWHGCRATKGLMK--GKHYYEVSC---HDQGL 144 +P+D+ + + + L ++ + R + G +Y+EV G Sbjct 423 SPHDKCLSIGLSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGY 482 Query 145 CRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQF--DNYGEEFTMHDTIGCYLDIDK 200 +G + Q ++ G DK +G+ G S + YG FT D IGC ++ Sbjct 483 MGIGLTAQQFRMNRLPGWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVN 542 Query 201 GHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA--ELKFNFGEEEFKFPPKDGFV 256 ++KNG DLG+AF P L+P L+ E+ NFG+E FKF + Sbjct 543 NTCFYTKNGVDLGIAFRDLP----TKLYPTVGLQTPGEEVDANFGQEPFKFDKIVDMM 596 >sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens OX=9606 GN=RYR3 PE=1 SV=3 Length=4870 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 37/189 (20%), Positives = 72/189 (38%), Gaps = 9/189 (5%) Query 68 LKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKG 127 L D++ K + +++ + N A + S + + + Sbjct 1024 LLDERTKKSNRDSLREAVRTFVGYGYNIEPSDQELADS--AVEKVSIDKIRFFRVERSYA 1081 Query 128 LMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEE 185 + GK Y+E G RVGW+ + ++LG D F F G + ++ +G Sbjct 1082 VRSGKWYFEFEVVTGGDMRVGWARPGCRPDVELGADDQAFVFEGNRGQRWHQGSGYFGRT 1141 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDL----GLAFEIPPHMKNQALFPACVLKNAEL-KF 240 + D +GC +++D + F+ NG+ L G + P C L +++ + Sbjct 1142 WQPGDVVGCMINLDDASMIFTLNGELLITNKGSELAFADYEIENGFVPICCLGLSQIGRM 1201 Query 241 NFGEEEFKF 249 N G + F Sbjct 1202 NLGTDASTF 1210 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 32/154 (21%), Positives = 52/154 (34%), Gaps = 32/154 (21%) Query 132 KHYYEVSC--------HDQGLCRVGWSTMQA------------SLDLGTDKFGFGFGGTG 171 K Y+E+ + RVGW++ +G D + +GF G Sbjct 659 KWYFELIIDQVDPFLTAEPTHLRVGWASSSGYAPYPGGGEGWGGNGVGDDLYSYGFDG-- 716 Query 172 KKSHNKQFDNYGEEFTMH-----DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQA 226 + + H D + C LD+ + F NG+ + FE + Sbjct 717 LHLWSGRIPRAVASINQHLLRSDDVVSCCLDLGVPSISFRINGQPVQGMFENFN--TDGL 774 Query 227 LFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FP +++F G EFKF P G+ Sbjct 775 FFPVMSFSAGVKVRFLMGGRHGEFKFLPPSGYAP 808 Score = 41.7 bits (96), Expect = 0.030, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (51%), Gaps = 6/67 (9%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLK---NAELKFNFGEEEFK 248 IGC +D+ G + FS NGK+LG +++ P+ K FPA L+ + +F G+ + Sbjct 1411 IGCLVDLAMGMLSFSANGKELGTCYQVEPNTKV---FPAVFLQPTSTSLFQFELGKLKNA 1467 Query 249 FPPKDGF 255 P Sbjct 1468 MPLSAAI 1474 >sp|A2AGL3|RYR3_MOUSE Ryanodine receptor 3 OS=Mus musculus OX=10090 GN=Ryr3 PE=1 SV=1 Length=4863 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 36/190 (19%), Positives = 72/190 (38%), Gaps = 11/190 (6%) Query 68 LKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA-IGSDGLCCQSREVKEWHGCRATK 126 L D++ K + +++ + N A + + + + Sbjct 1024 LLDERTKKSNRDSLREAVRTFVGYGYNIEPSDQELADPTVEKVSID---KIRFFRVERSY 1080 Query 127 GLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGE 184 + GK Y+E G RVGW+ + ++LG D F F G+ + ++ +G Sbjct 1081 AVKSGKWYFEFEVVTGGDMRVGWARPGCRPDIELGADDQAFVFEGSRGQRWHQGSGYFGR 1140 Query 185 EFTMHDTIGCYLDIDKGHVKFSKNGKDL----GLAFEIPPHMKNQALFPACVLKNAEL-K 239 + D +GC +++D + F+ NG+ L G + P C L +++ + Sbjct 1141 TWQPGDVVGCMINLDDASMVFTLNGELLITNKGSELAFADYEIENGFVPICSLGLSQIGR 1200 Query 240 FNFGEEEFKF 249 N G + F Sbjct 1201 MNLGTDASTF 1210 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 32/154 (21%), Positives = 52/154 (34%), Gaps = 32/154 (21%) Query 132 KHYYEVSC--------HDQGLCRVGWSTMQA------------SLDLGTDKFGFGFGGTG 171 K Y+E+ + RVGW++ +G D + +GF G Sbjct 659 KWYFELIIDQVEPFLTAEPTHLRVGWASSSGYAPYPGGGEGWGGNGVGDDLYSYGFDG-- 716 Query 172 KKSHNKQFDNYGEEFTMH-----DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQA 226 + + H D + C LD+ + F NG+ + FE + Sbjct 717 LHLWSGRIPRAVASINQHLLKSDDVVSCCLDLGVPSISFRINGQPVQGMFENFN--TDGL 774 Query 227 LFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FP +++F G EFKF P G+ Sbjct 775 FFPVMSFSAGVKVRFLMGGRHGEFKFLPPSGYAP 808 Score = 41.7 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 22/67 (33%), Positives = 34/67 (51%), Gaps = 6/67 (9%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLK---NAELKFNFGEEEFK 248 IGC LD+ G + FS NGK+LG +++ P+ K FPA L+ + +F G+ + Sbjct 1411 IGCLLDLAMGMLSFSANGKELGTCYQVEPNTKV---FPAVFLQPTSTSLFQFELGKLKNA 1467 Query 249 FPPKDGF 255 P Sbjct 1468 MPLSAAI 1474 >sp|F1LMY4|RYR1_RAT Ryanodine receptor 1 OS=Rattus norvegicus OX=10116 GN=Ryr1 PE=1 SV=1 Length=5035 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 72/199 (36%), Gaps = 15/199 (8%) Query 55 AFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSR 114 A P + V L D+ + + ++ L + N + QSR Sbjct 1016 ARRNPRL--VPYRLLDEATKRSNRDSLCQAVRTLLGYGYNIEPPDQE----PSQVDSQSR 1069 Query 115 -EVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTG 171 + + + G+ Y+E G +GW+ ++ ++LG D + F G Sbjct 1070 GDRARIFRAEKSYAVQSGRWYFEFEAVTTGR-ELGWARPELRPDVELGADDLAYVFNGHR 1128 Query 172 KKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGK----DLGLAFEIPPHMKNQAL 227 + + + +G + D +GC +D+ + + F+ NG+ D G Sbjct 1129 GQRWHLGSEPFGRPWQSGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGF 1188 Query 228 FPACVLKNAEL-KFNFGEE 245 P C L ++ N G++ Sbjct 1189 LPVCSLGPGQVGHLNLGQD 1207 Score = 50.5 bits (119), Expect = 6e-05, Method: Composition-based stats. Identities = 36/166 (22%), Positives = 57/166 (34%), Gaps = 28/166 (17%) Query 118 EWHGCRATKGLMKGKHYYEVSCHDQG--------LCRVGWSTMQA------------SLD 157 RA GK Y+EV + RVGW+ + Sbjct 648 NIFVGRAEGSTQYGKWYFEVMVDEVAPFLTAQATHLRVGWALSEGYSPYPGGGEGWGGNG 707 Query 158 LGTDKFGFGFGGTGKKSHN--KQFDNYGEEF-TMHDTIGCYLDIDKGHVKFSKNGKDLGL 214 +G D + +GF G + + + + G+ D + C LD+ + F NG + Sbjct 708 VGDDLYSYGFDGLHLWTGHVARPVTSPGQHLLGPEDVVSCCLDLSVPSISFRINGCPVQG 767 Query 215 AFEIPPHMKNQALFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FE + FP +++F G EFKF P G+ Sbjct 768 VFE--SFNLDGLFFPVVSFSAGIKVRFLLGGRHGEFKFLPPPGYAP 811 Score = 41.3 bits (95), Expect = 0.041, Method: Composition-based stats. Identities = 22/71 (31%), Positives = 34/71 (48%), Gaps = 7/71 (10%) Query 191 TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFP 250 IGC +D+ G + F+ NGK+ F++ P+ K LFPA + L + +F Sbjct 1515 VIGCLVDLATGLMTFTANGKESNTFFQVEPNTK---LFPAVFV----LPTHQNVVQFDLR 1567 Query 251 PKDGFVALSKA 261 P + LS A Sbjct 1568 PGANIMPLSAA 1578 >sp|O88700|BLM_MOUSE RecQ-like DNA helicase BLM OS=Mus musculus OX=10090 GN=Blm PE=1 SV=1 Length=1416 Score = 118 bits (295), Expect = 7e-26, Method: Composition-based stats. Identities = 69/442 (16%), Positives = 138/442 (31%), Gaps = 68/442 (15%) Query 212 LGLAFEIPPHMKNQAL-FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 L+ + P H Q+L FP FG F+ + A D +I+ Sbjct 640 QNLSSKNPKHEHFQSLNFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPT 699 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY--------IDNPKLRELL 322 G + Q + +++ P R L ++ +++ + D Sbjct 700 GGGKSLCYQLPACVSPGVTIVISPLRSL---IVDQVQKLTSFDIPATYLTGDKTDSEAAN 756 Query 323 IIGGVAARD-QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 I ++ +D + +L + V + RL + + V+DEA + G+ Sbjct 757 IYLQLSKKDPIIKLLYVTPEKVCAS-NRLISTLE-NLYERKLLARFVIDEAHCVSQWGH- 813 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV 441 + + ++ + + V+ +AT + K + ++ + + Sbjct 814 -DFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQL--KILRPQVFSMSFNRHNL 870 Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V+P PK + Sbjct 871 KYYVLPKKPKKVAF---------------------------------------DCLEWIR 891 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERF 561 K H D II+C ++ +CD + ++G + + H R + ++ Sbjct 892 KHHPYDSGIIYCLSRRECDTMADTLQREG---------LAALAYHAGLSDSARDEVQHKW 942 Query 562 KKGDVRFLIC-TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 D +IC T GID V +VI+ +LP + Y GR GR + + Sbjct 943 INQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYT 1002 Query 621 TEKEKVWYHVCSSRGKGCYNTR 642 + G Y+T+ Sbjct 1003 YHDVTRLKRLIMMEKDGNYHTK 1024 >sp|Q24498|RYR_DROME Ryanodine receptor OS=Drosophila melanogaster OX=7227 GN=RyR PE=1 SV=3 Length=5127 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 37/200 (19%), Positives = 77/200 (39%), Gaps = 18/200 (9%) Query 59 PVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVK- 117 P + + + ++ + + ++ + ++P G++ L +++ +K Sbjct 1021 PHLVPYAKVDEAIKKANRDTASETVRTLLVYGYVLDPPT-----GEGTEALLAEAQRLKF 1075 Query 118 ---EWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQA--SLDLGTDKFGFGFGGTGK 172 + + GK Y+E G RVGW+ LG++ + F G Sbjct 1076 AGFRTYRVERNYAVTSGKWYFEFEVLTSGPMRVGWARADCYPGAMLGSEDTSWAFDGHNV 1135 Query 173 -KSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKD----LGLAFEIPPHMK-NQA 226 K H +++G + D IGC++D+ + + FS NG+ LG Sbjct 1136 TKMHAGSIEHFGVRYEAGDVIGCFIDVKEQTISFSLNGELLMDALGGETTFADVTAEGVG 1195 Query 227 LFPACVLK-NAELKFNFGEE 245 PAC L + + +G++ Sbjct 1196 FVPACTLGVGQKARLIYGQD 1215 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 36/159 (23%), Positives = 56/159 (35%), Gaps = 35/159 (22%) Query 132 KHYYEVSC-------HDQGLCRVGWSTMQA------------SLDLGTDKFGFGFGG--- 169 K Y+EV+ H R+GW+ +G D + FGF G Sbjct 665 KWYFEVTMDHIEQTTHMMPHLRIGWANTSGYVPYPGGGKKWGGNGVGDDLYSFGFDGAFL 724 Query 170 -TGKKS----HNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKN 224 TG + + + D IG +D+ + F+ NG + +F + Sbjct 725 WTGGRKTLVVDALPEEPF---IRKGDVIGVAIDLSVPIITFTFNGVKVRGSFR--DFNLD 779 Query 225 QALFPACVLKNAE-LKFNFGEE--EFKFPPKDGFVALSK 260 FP + +F FG + KF P GF AL + Sbjct 780 GMFFPVMSCSSKLSCRFLFGGDHGRLKFAPPMGFSALVQ 818 >sp|Q05549|HRQ1_YEAST ATP-dependent helicase HRQ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HRQ1 PE=1 SV=1 Length=1077 Score = 114 bits (286), Expect = 6e-25, Method: Composition-based stats. Identities = 83/515 (16%), Positives = 159/515 (31%), Gaps = 52/515 (10%) Query 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFG 243 ++ + I + + + F IP C E+ Sbjct 230 PNYSNNSVITTIPQMIEKLKSTEFYASQIKHCFTIPSRTAK--YKGLCFELAPEVYQGME 287 Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTK-----FLPNAPKALIVEPSREL 298 E F D +L + + I S SG + + Q + + P++ L Sbjct 288 HENFYSHQADAINSLHQGENVIITTSTSSGKSLIYQLAAIDLLLKDPESTFMYIFPTKAL 347 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK 358 A+ K I K + G ++ + + ++ P + + Sbjct 348 AQDQKRAFKVILSKIPELKNAVVDTYDGDTEPEERAYIRKNARVIFTNPDMIHTSILPNH 407 Query 359 LN----LSQVRFLVLDEAD---GLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 N L ++ +V+DE GL + + R+ + LQ I CSATL Sbjct 408 ANWRHFLYHLKLVVVDELHIYKGLFGSHVALVMRRLLRLC-HCFYENSGLQFISCSATLK 466 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 S V+ + + V L ED P H+VV P Sbjct 467 SP-VQHMKDMFGIN--EVTLIHEDGSPTGAKHLVVWNPP--------------------- 502 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 P+ + ++ + + I FC + C+ L + Sbjct 503 --------ILPQHERKRENFIRESAKILVQLILNNVRTIAFCYVRRVCELLMKEVRNIFI 554 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 ++ + G +R++ G+++ +I T+ GIDI G+ V+ Sbjct 555 ETGREDLVTEVMSYRGGYSASDRRKIEREMFHGNLKAVISTNALELGIDIGGLDAVLMCG 614 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 P N+ + GR GR +++LV V H + + + Sbjct 615 FPLSMANFHQQSGRAGRRNND--SLTLVVASDSPVDQHYVAHPESLLEVNNFESYQDLVL 672 Query 652 WYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDG 686 +N + +L E H+ C ++ + + F Sbjct 673 DFNNILIL---EGHIQCAAFELPINFERDKQYFTE 704 >sp|Q58969|Y1574_METJA Uncharacterized ATP-dependent helicase MJ1574 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1574 PE=3 SV=1 Length=684 Score = 114 bits (284), Expect = 7e-25, Method: Composition-based stats. Identities = 85/508 (17%), Positives = 179/508 (35%), Gaps = 71/508 (14%) Query 213 GLAFEIPPHMK---NQALFPACVLKNAELKFNFGEEEFKFP--PKDGFVALSKAPDGYIV 267 G+ EI K + F KN E+ FK L D + Sbjct 7 GIEKEIIKIYKIPERKGRFSNFKFKNKEINELIDALGFKLYLHQVKALKYLYNKKDVVVT 66 Query 268 KSQHSGNAQVTQTKFLPNAP-----KALIVEPSRELAEQTLNNI---KQFKKYIDNPKLR 319 S SG +++ + N + L++ P+R L + I N +++ Sbjct 67 TSTASGKSEIFRLAIFDNFLSNPDDRYLLIYPTRALINNQYEKFSMENELFYKITNKRVK 126 Query 320 ELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGL 375 ++ G V + +L++ +++ TP L + N L ++ LV+DE Sbjct 127 AEILTGDVGLEKRREILKDKPNVLFTTPDMLHYQILKNHNNYLWLLKNLKLLVVDELHVY 186 Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGED 435 ++ + + + LQ++ SAT + P Sbjct 187 RGVFGTNMVYVFKRLLKLLKRLNNNLQILCLSAT-------------LKNPKE------- 226 Query 436 SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 V +R +E + KS+ + + ++ ++ I+ L Sbjct 227 -----------FVKLLFNRDFEVVDKSYNPSSRKYLAILEPKNLDNKQLLRRLIENLVDN 275 Query 496 YAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + ++F T+ + + L ++ + + G + R+ Sbjct 276 NI----------KTLVFFDTRKETEKLMRFLLN-------SKVFYKLSTYKGTLPKYVRE 318 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDE-KQNYVHRIGRVGRAERMGL 614 + E+FK G++ L+ T+ GIDI + VIN +P + + + R GR GR ++ L Sbjct 319 EIEEKFKNGEILALLTTNALELGIDIGDLDAVINYGIPPDGIFSLIQRFGRAGRRDKEAL 378 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 I ++ + +Y Y R+++ + N ++HL+ IS+++ Sbjct 379 NIIVLRKDGLDYYY---KEHLNELYE-RIRKGIIEYMPVNIKNRFV-TKKHLHYLISELK 433 Query 675 PDIKVPVDEFDGKVTYGQKRAAGGGSYK 702 +++F+ ++ +R YK Sbjct 434 IVDFDELNDFEKEIVKELEREGKIKIYK 461 >sp|Q9DEY9|BLM_XENLA RecQ-like DNA helicase BLM OS=Xenopus laevis OX=8355 GN=blm PE=2 SV=1 Length=1364 Score = 114 bits (286), Expect = 8e-25, Method: Composition-based stats. Identities = 69/443 (16%), Positives = 136/443 (31%), Gaps = 70/443 (16%) Query 212 LGLAFEIPPHMKNQAL-FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQ 270 L E P H + + FP FG F+ + A D +I+ Sbjct 584 LKPQIENPAHERFRGFNFPHSKEMMKIFHKKFGLHRFRTNQLEAINACLCGEDCFILMPT 643 Query 271 HSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY--------IDNPKLRELL 322 G + Q + +++ P R L ++ +++ D Sbjct 644 GGGKSLCYQLPGCISPGVTIVISPLRSL---IVDQVQKLTSLDIPATYLTGDKTDAEAAS 700 Query 323 IIGGVAARD-QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYS 381 I ++ +D + +L + V + RL + + V+DEA + G+ Sbjct 701 IYLQLSKKDPIIKLLYVTPEKVCAST-RLISTME-NLYERQLLARFVIDEAHCVSQWGH- 757 Query 382 DFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKI-MHFPTWVDLKGEDSVPDT 440 + ++ + + + ++ +AT + K + ++ M P + D Sbjct 758 -DFRPDYKRLNVLRQKFQSVPMMALTATANPRVKKDILNQLKMTKP---QIFTMSFNRDN 813 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + + V+P PK L + Sbjct 814 LKYEVLPKKPKRVAL---------------------------------------DCVEWI 834 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 K H D II+C ++ +CD + ++G + + H R + Sbjct 835 KKHHPNDSGIIYCLSRHECDTMADTLQKEG---------LAALAYHAGLADSNRDYVQHK 885 Query 561 FKKGD-VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 + D + + T GID V YVI+ +LP + Y GR GR + Sbjct 886 WINQDDCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGETSHCLLFY 945 Query 620 ATEKEKVWYHVCSSRGKGCYNTR 642 + + G +T+ Sbjct 946 SYHDVTRIRRLIQMEKDGNSHTK 968 >sp|P54132|BLM_HUMAN RecQ-like DNA helicase BLM OS=Homo sapiens OX=9606 GN=BLM PE=1 SV=1 Length=1417 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 66/458 (14%), Positives = 140/458 (31%), Gaps = 69/458 (15%) Query 196 LDIDKGHVKFSKNGKDLGLAFEIPPHMKNQAL-FPACVLKNAELKFNFGEEEFKFPPKDG 254 ++ + ++ LA H + Q+L FP FG F+ + Sbjct 617 INFSESIQNYTDKSA-QNLASRNLKHERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEA 675 Query 255 FVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY-- 312 A D +I+ G + Q + +++ P R L ++ +++ Sbjct 676 INAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSL---IVDQVQKLTSLDI 732 Query 313 ------IDNPKLRELLIIGGVAARD-QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 D I ++ +D + +L + + + RL + + Sbjct 733 PATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICAS-NRLISTLE-NLYERKLLA 790 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 V+DEA + G+ + + ++ + + V+ +AT + K + ++ Sbjct 791 RFVIDEAHCVSQWGH--DFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQL--K 846 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 + + + V+P PK Sbjct 847 ILRPQVFSMSFNRHNLKYYVLPKKPKKVAF------------------------------ 876 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + K H D II+C ++ +CD + + G + + Sbjct 877 ---------DCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDG---------LAALAY 918 Query 546 HGDRKPHERKQNLERFKKGD-VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 H R + +++ D + + T GID V +VI+ +LP + Y G Sbjct 919 HAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESG 978 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 R GR + + + G ++TR Sbjct 979 RAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTR 1016 >sp|P0CT33|TLH1_SCHPO ATP-dependent DNA helicase tlh1 (Fragment) OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tlh1 PE=3 SV=1 Length=1887 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 53/282 (19%), Positives = 86/282 (30%), Gaps = 51/282 (18%) Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 L ++ +V+DEA LL+ G +++ + + + SAT + Sbjct 1313 LGRLARVVIDEAHLLLTSGAWRTALSRASRLSGLYAPLH-----LLSATFPRQLEMVARQ 1367 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 L+ + + + + + P + L R Sbjct 1368 TFCTNFYV--LRETSTARENIFYFLHPYDNTEFLLDLR---------------------- 1403 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 R +AIIFCRTK D + + + Q Sbjct 1404 --------------TLMKRTKVFEGDGRAIIFCRTKKDVEYIHRRLHQSDLFAHTH---- 1445 Query 541 SCVCLHGDRKPHERKQNLERFKK--GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 GD ER+ N + F+ G R +I T GI+ GV V++ LP + Sbjct 1446 -VTIYTGDVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMD 1504 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 YV GR GR + +A W K N Sbjct 1505 YVQETGRAGRDGKYAIAALFYEKYDS-TWSSYVEDSMKNFLN 1545 >sp|Q1RKN3|TLH2_SCHPO ATP-dependent DNA helicase tlh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tlh2 PE=2 SV=1 Length=1919 Score = 111 bits (278), Expect = 8e-24, Method: Composition-based stats. Identities = 53/282 (19%), Positives = 86/282 (30%), Gaps = 51/282 (18%) Query 361 LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSE 420 L ++ +V+DEA LL+ G +++ + + + SAT + Sbjct 1313 LGRLARVVIDEAHLLLTSGAWRTALSRASRLSGLYAPLH-----LLSATFPRQLEMVARQ 1367 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 L+ + + + + + P + L R Sbjct 1368 TFCTNFYV--LRETSTARENIFYFLHPYDNTEFLLDLR---------------------- 1403 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 R +AIIFCRTK D + + + Q Sbjct 1404 --------------TLMKRTKVFEGDGRAIIFCRTKKDVEYIHRRLHQSDLFAHTH---- 1445 Query 541 SCVCLHGDRKPHERKQNLERFKK--GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQN 598 GD ER+ N + F+ G R +I T GI+ GV V++ LP + Sbjct 1446 -VTIYTGDVSDEERQMNFDAFRNANGKTRIMIATKAFGLGINYMGVRLVVHYGLPASSMD 1504 Query 599 YVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 YV GR GR + +A W K N Sbjct 1505 YVQETGRAGRDGKYAIAALFYEKYDS-TWSSYVEDSMKNFLN 1545 >sp|Q9C8J7|TRO_ARATH Protein TRAUCO OS=Arabidopsis thaliana OX=3702 GN=TRO PE=1 SV=1 Length=509 Score = 109 bits (272), Expect = 9e-24, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 81/212 (38%), Gaps = 54/212 (25%) Query 90 KWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSC---HDQGLCR 146 + ++ + I D L S K + RAT+G+++G Y+E+ + G R Sbjct 272 EICLSKVYKAEKVEISEDRLTAGSS--KGYRMVRATRGVVEGAWYFEIKVLSLGETGHTR 329 Query 147 VGWSTMQASLD--LGTDKFGFGFGG-TGKKSHNKQFDNYGEE-FTMHDTIGCYLDIDKG- 201 +GWST + L +G D FGF G K H + Y EE + D IG Y+++ G Sbjct 330 LGWSTDKGDLQAPVGYDGNSFGFRDIDGCKIHKALRETYAEEGYKEGDVIGFYINLPDGE 389 Query 202 ----------------------------------HVKFSKNGKDLGLAFEIPPHMKNQAL 227 + F KNG G AF + Sbjct 390 SFAPKPPHYVFYKGQRYICAPDAKEEPPKVVPGSEISFFKNGVCQGAAFT---DIVGGRY 446 Query 228 FPACVL------KNAELKFNFGEEEFKFPPKD 253 +PA + N +KFNFG F+F P+D Sbjct 447 YPAASMYTLPDQSNCLVKFNFG-PSFEFFPED 477 >sp|Q9I920|BLM_CHICK RecQ-like DNA helicase BLM OS=Gallus gallus OX=9031 GN=BLM PE=1 SV=2 Length=1183 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 69/418 (17%), Positives = 132/418 (32%), Gaps = 81/418 (19%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQ 301 FG F+ + A D +I+ G + Q +A +++ P R L Sbjct 434 FGLHSFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLIID 493 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARD------QLSVLENGVDIVVGTP------GR 349 + +K + + G + D QLS + + ++ TP R Sbjct 494 QVQKLKTL-------DIASTYLTGDITDADASKTYMQLSKKDPIIKLLYVTPEKVCASNR 546 Query 350 LDDLVSTGKLNLSQVRFL---VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 L + NL + L V+DEA + G+ + + ++ + + ++ Sbjct 547 LLSALE----NLYNRKLLARFVIDEAHCVSQWGH--DFRKDYKRLNMLRKKFHSVPMMAL 600 Query 407 SATLHSFDVKKLSEKI-MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 +AT + K + ++ M P + + + V+P PK + Sbjct 601 TATANPRVQKDIQNQLEMLKP---QVFTMSFNRHNLKYDVLPKKPKKVAM---------- 647 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + K H D II+C ++ +CD Sbjct 648 -----------------------------DCLEWIKKYHPHDSGIIYCLSRHECDTTAAI 678 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD-VRFLICTDVAARGIDIHGV 584 ++G + + H R +++ + + + T GID V Sbjct 679 LQKEG---------LAALAYHAGLTDSNRDLVQKKWVNQEGCQVICATIAFGMGIDKPDV 729 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 YVI+ +LP + Y GR GR M + + + G +TR Sbjct 730 RYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLILMEKDGNSHTR 787 >sp|A8WK63|RECQ1_CAEBR Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis briggsae OX=6238 GN=CBG24191 PE=3 SV=1 Length=618 Score = 108 bits (269), Expect = 4e-23, Method: Composition-based stats. Identities = 80/476 (17%), Positives = 156/476 (33%), Gaps = 73/476 (15%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP 287 FP N LK F E+F+ A+ D ++ S G + Q L Sbjct 68 FPWSDEANQILKNKFRLEKFRPLQSAAINAVMSKEDAIVILSTGGGKSLCYQLPALLAKG 127 Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV------- 340 L++ P L + I Q +K + + +D+ +E + Sbjct 128 LTLVISP---LVSLVEDQIMQLQKL----GIDAASLNANTP-KDEAKRVEQAITKGSTEL 179 Query 341 DIVVGTPGRLDD---LVS--TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 ++ TP +L +++ L + ++ + +DE G+ ++ + + Sbjct 180 RLLYVTPEKLAKSKRMMNQLEKSLGVGYLKLIAIDEVHCCSQWGH--DFRTDYSFLNVLK 237 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 K + ++ +AT S +V +K++ P + + +++ V+ D Sbjct 238 RQFKGVPILGLTATATS-NVLDDVKKMLGIPVAI-VFRAGFNRANLNYKVLTKPGSEDEC 295 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA-IIFCR 514 E++ VR IK + II+C Sbjct 296 VEKI--------------------------------------VRTIKRKFSGKTGIIYCL 317 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 ++ DC+ L + G H +P +R +++ G+++ ++ T Sbjct 318 SRNDCEKLAKSLKANG---------IRAKHYHAYMEPVDRSAAHQKWVSGEIQVIVATVA 368 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 GID V +VI+ +LP +NY GR GR I + Sbjct 369 FGMGIDKPDVRFVIHHSLPKSIENYYQESGRAGRDGLPATCILYYRMSDIFKQSSMIQQE 428 Query 635 GKGCYN-TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVT 689 G N + T+ ++L EE + Q + D+ G T Sbjct 429 QTGIANLYNMVRYASDTVTCRRVKLAEHFEEAWEPSWCQKQCDVCEKSSNSPGTAT 484 Score = 37.8 bits (86), Expect = 0.38, Method: Composition-based stats. Identities = 18/114 (16%), Positives = 38/114 (33%), Gaps = 18/114 (16%) Query 18 EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKG 77 + +Q+ +I ++ D ++ TG GK+ + +P + KG Sbjct 80 NKFRLEKFRPLQSAAINAVMSKEDAIVILSTGGGKSLCYQLPALL------------AKG 127 Query 78 KTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKG 131 T + S L + + I + L + + R + + KG Sbjct 128 LTLV---ISPLVSLVEDQIMQLQKLGIDAASLNANTPK---DEAKRVEQAITKG 175 >sp|Q8IBN8|DDX31_PLAF7 ATP-dependent DNA helicase DDX31 OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=DDX31 PE=1 SV=1 Length=899 Score = 108 bits (269), Expect = 7e-23, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 65/136 (48%), Gaps = 4/136 (3%) Query 265 YIVKSQHSGNAQVTQTKFLPN-APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 Y + S + K + L++ P+RELA Q N K P + I Sbjct 227 YAIPSIEKILNMKEKVKITRDMGIFVLVLSPTRELAIQINNLFCILTK--PYPYIVASCI 284 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLV-STGKLNLSQVRFLVLDEADGLLSQGYSD 382 GG + + + L+ G+ I+ TPGRL D + +T L L+ ++ ++LDEAD ++ G D Sbjct 285 TGGEKKKSEKNRLKKGISILTCTPGRLLDHLENTKSLKLTFLKMVILDEADKIIYLGTQD 344 Query 383 FINRMHNQIPQVTSDG 398 I +++ I ++ + Sbjct 345 KIKLIYDMIRKIKQEE 360 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 25/102 (25%), Positives = 46/102 (45%), Gaps = 1/102 (1%) Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 + + LHG+ +R N F K + L+CTD+ +RGI + VI P + Sbjct 667 NNVNIYILHGNLSKEDRLGNFMDFSKTNNSILLCTDIISRGIHFDSLSVVIQYDPPQILE 726 Query 598 NYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 Y+H++GR R + G A + + K + ++ ++ Sbjct 727 EYIHKVGRTARLNKQGSAYLFLLKSQ-KQFLNILKNKNIQLK 767 Score = 72.9 bits (177), Expect = 8e-12, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 55/131 (42%), Gaps = 6/131 (5%) Query 4 FSEMG--VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 F ++ + + +E+ +++ T IQ SIPL D+ + + TGSGKT ++IP I Sbjct 173 FCDLKYILSESLINTLEKNEFIKMTSIQKMSIPLFFKPNDIFLKSMTGSGKTLCYAIPSI 232 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQM---NPYDRGSAFAIGSDGLCCQSREVKE 118 + + +K++ + + S + + N + + C E K+ Sbjct 233 EKIL-NMKEKVKITRDMGIFVLVLSPTRELAIQINNLFCILTKPYPYIVASCITGGEKKK 291 Query 119 WHGCRATKGLM 129 R KG+ Sbjct 292 SEKNRLKKGIS 302 >sp|Q9FT70|RQL4B_ARATH ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana OX=3702 GN=RECQL4B PE=2 SV=1 Length=1150 Score = 108 bits (269), Expect = 8e-23, Method: Composition-based stats. Identities = 70/417 (17%), Positives = 137/417 (33%), Gaps = 85/417 (20%) Query 239 KFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL 298 K FG F+ ++ A D +++ G + Q L A L++ P L Sbjct 462 KLVFGNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQLPALLCAGITLVISP---L 518 Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL------ENGVDIVVGTP----- 347 + I + + + G+ +QL +L ++ ++ TP Sbjct 519 VSLIQDQIMNLLQ----TNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAK 574 Query 348 ----GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 R +++++ L V+DEA + G+ + + + + + Sbjct 575 SESLLRHLEILNSRSLLAR----FVIDEAHCVSQWGH--DFRPDYQGLGVLKQKFPNIPM 628 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + +AT + SV + V + VN Sbjct 629 LALTATATT-----------------------SVKEDVVQALGLVN-------------- 651 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKG--EYAVRAIKEHKMDQA-IIFCRTKIDCD 520 R N P +W + E + I+E+ D+ II+C +++DC+ Sbjct 652 --------CVVFRQSFNRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCE 703 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + + G HG P +R +++ K ++ + T GI+ Sbjct 704 KVTEALRVFG---------HKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGIN 754 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 V +VI+ +LP + Y GR GR + + + H+ S G G Sbjct 755 KPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLG 811 >sp|Q19546|WRN_CAEEL ATP-dependent helicase wrn-1 OS=Caenorhabditis elegans OX=6239 GN=wrn-1 PE=3 SV=2 Length=1056 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 79/474 (17%), Positives = 146/474 (31%), Gaps = 87/474 (18%) Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVA 257 +D G +N + A + P L L FG + F+ D Sbjct 183 LDDGEFFTDRNVPQIDEA--TKMKWASMTSPPQEALN--ALNEFFGHKGFREKQWDVVRN 238 Query 258 LSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF-KKYIDNP 316 + D +++ S G + Q L ++V P L + + K ID Sbjct 239 VLGGKDQFVLMSTGYGKSVCYQLPSLLLNSMTVVVSP---LISLMNDQVTTLVSKGIDAV 295 Query 317 KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDL-----VSTGKLNL-----SQVRF 366 KL G + + + + N + + R + S L L + Sbjct 296 KLD------GHSTQIEWDQVANNMHRI-----RFIYMSPEMVTSQKGLELLTSCRKHISL 344 Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ--VIVCSATLHSFDVKKLSEKIMH 424 L +DEA + G+ + + ++ + +I +AT Sbjct 345 LAIDEAHCVSQWGH--DFRNSYRHLAEIRNRSDLCNIPMIALTAT--------------- 387 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 V ++ + RL K I T K+ +S +M Sbjct 388 --ATVRVRDDVIAN------------------LRLRKPLITTTSFDRKNLYISVHSSKDM 427 Query 485 WSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVC 544 + +K + H II+C+TK D++ + G Sbjct 428 AEDLGLFMKTD---EVKGRHFGGPTIIYCQTKQMVDDVNCVLRRIG---------VRSAH 475 Query 545 LHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIG 604 H ++R++ F + + ++ T GID V VI+ P+ ++Y IG Sbjct 476 YHAGLTKNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIG 535 Query 605 RVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQL 658 R GR + A + ++ N++ KE+ + QL Sbjct 536 RAGRDGSPSICRVFWAPKD-------LNTIKFKLRNSQQKEEVVENLTMMLRQL 582 >sp|A7EQ00|SSH4_SCLS1 Protein ssh4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=ssh4 PE=3 SV=1 Length=523 Score = 105 bits (262), Expect = 2e-22, Method: Composition-based stats. Identities = 38/154 (25%), Positives = 64/154 (42%), Gaps = 11/154 (7%) Query 133 HYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YGEE 185 +Y+E +D+ L +G +T L G K+ + TG + +N+ F YG + Sbjct 204 YYWESKIYDKPENTLISIGVATKPYPLFRLPGWHKYSVAYTSTGHRRYNQPFSGPVYGPQ 263 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKN-AELKFNFGE 244 + D IG G + F++NGK L ++ +K+Q LFPA + NFG+ Sbjct 264 YVQGDVIGVGYRPRTGTIFFTRNGKKLE---DVAHGLKSQNLFPAVGANGPCTVHVNFGQ 320 Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F F + G + G+ Q + Sbjct 321 SGFVFIEANVKKWGLAPMTGSLAPPPPYGSEQGS 354 >sp|P71359|RECQ_HAEIN ATP-dependent DNA helicase RecQ OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=recQ PE=3 SV=1 Length=619 Score = 106 bits (264), Expect = 2e-22, Method: Composition-based stats. Identities = 69/438 (16%), Positives = 140/438 (32%), Gaps = 77/438 (18%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPS 295 + LK FG + F+ ++ A D +V + +G + Q L L++ P Sbjct 18 SVLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCFDGLTLVISPL 77 Query 296 REL----AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 L +Q N + + L + + QL +L + ++ Sbjct 78 ISLMKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISGQLKLLYVSPE-------KVM 130 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 ++ S+V F+ +DEA + G+ Sbjct 131 TNSFFQLISYSKVCFIAIDEAHCISQWGHD------------------------------ 160 Query 412 SFDVKKLSEKIMHFPTWVDLKG-EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 P + L G + S PD ++ + D ++ H+ ++H Sbjct 161 ------------FRPEYTQLGGLKASFPDA---PIMALTATADYATQQDILRHLNLKNLH 205 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 + N E K + E R + K II+C ++ + + + +G Sbjct 206 KYIGSFDRPNIRYTLEEKYKPM--EQLTRFVLAQKGKSGIIYCNSRNKVERIAESLRNKG 263 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 S H + R++ + F++ +V+ ++ T GI+ V +V + Sbjct 264 ---------VSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHF 314 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 LP ++Y GR GR + A+ + + E Sbjct 315 DLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLQKILLEK---------PETPQRQ 365 Query 651 IWYNEMQLLSEIEEHLNC 668 I ++++ + E E C Sbjct 366 IEQHKLEAIGEFAESQTC 383 Score = 43.6 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 55/368 (15%), Positives = 110/368 (30%), Gaps = 79/368 (21%) Query 10 MPEIAQAVEEM-DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 P ++ + + Q E I L G D L+ TG+GK+ + IP + Sbjct 13 KPTALSVLKSVFGYQSFRKGQEEVINAALNGQDALVVMATGNGKSLCYQIPALCF----- 67 Query 69 KDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGL-CCQSREVKEWHGCRATKG 127 + S L + D+ A I +D L Q+ E ++ + G Sbjct 68 ----------DGLTLVISPLISLMKDQVDQLQANGIEADFLNSSQTLEQQQQVQNKLISG 117 Query 128 LMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFT 187 +K + ++ +Y + Sbjct 118 QLKLLYVSPEKVMTNSFFQL--------------------------------ISYSKV-- 143 Query 188 MHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEF 247 C++ ID+ H S+ G D + +K + A + ++ Sbjct 144 ------CFIAIDEAHCI-SQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQDIL 196 Query 248 KFPPKDGFV----ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL 303 + + + Y ++ ++ Q+T+ +I SR Sbjct 197 RHLNLKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSR------- 249 Query 304 NNIKQFKKYIDNPKLRELLIIGGV----AARDQLSVLENGVDIVVGTPGRLDDLVSTGKL 359 N +++ + + N + G+ R Q + V +VV T + + Sbjct 250 NKVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVAT------IAFGMGI 303 Query 360 NLSQVRFL 367 N S VRF+ Sbjct 304 NKSNVRFV 311 >sp|Q9CL21|RECQ_PASMU ATP-dependent DNA helicase RecQ OS=Pasteurella multocida (strain Pm70) OX=272843 GN=recQ PE=3 SV=1 Length=632 Score = 105 bits (263), Expect = 2e-22, Method: Composition-based stats. Identities = 65/406 (16%), Positives = 126/406 (31%), Gaps = 66/406 (16%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPS 295 L FG + F+ ++ A D ++ + +G + Q L L++ P Sbjct 28 DVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALCFEGLTLVISPL 87 Query 296 REL----AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 L +Q L N + + E + L +L + V+ T Sbjct 88 ISLMKDQVDQLLANGIEADYLNSSQTFTEQQQVQNKLMSGTLKLLYVSPEKVMTT--SFF 145 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 L+S +V F+ +DEA + G+ Sbjct 146 HLISH-----CKVSFVAIDEAHCISQWGHD------------------------------ 170 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 P + L G S H ++ + D + H+ H Sbjct 171 ------------FRPEYTQLGGLKSCFP--HAPIMALTATADHATRQDILRHLNLQSPHV 216 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 + N E K + E R + K II+C ++ + + + +G Sbjct 217 YIGSFDRPNIRYTLVEKFKPM--EQLCRFVLGQKGKSGIIYCNSRSKVERIAESLRNKG- 273 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 S H + +R+Q F++ +V+ ++ T GI+ V +V++ Sbjct 274 --------VSAQAYHAGLETSQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFD 325 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 LP ++Y GR GR + A+ + + + + Sbjct 326 LPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAWLHKILLEKPES 371 Score = 40.9 bits (94), Expect = 0.047, Method: Composition-based stats. Identities = 15/61 (25%), Positives = 25/61 (41%), Gaps = 1/61 (2%) Query 4 FSEMGVMPEIAQAVEEM-DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F E+ + + + + Q E I L G D L+ TG+GK+ + IP + Sbjct 17 FHEIPLKQTALDVLHAVFGYQSFRKGQEEVIDATLMGKDSLVIMATGNGKSLCYQIPALC 76 Query 63 I 63 Sbjct 77 F 77 >sp|A6S3E0|SSH4_BOTFB Protein ssh4 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=ssh4 PE=3 SV=1 Length=537 Score = 105 bits (261), Expect = 2e-22, Method: Composition-based stats. Identities = 38/154 (25%), Positives = 64/154 (42%), Gaps = 11/154 (7%) Query 133 HYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YGEE 185 +Y+E +D+ L +G +T L G K+ + TG + +N+ F YG + Sbjct 218 YYWESKIYDKPENTLISIGVATKPYPLFRLPGWHKYSVAYTSTGHRRYNQPFSGPVYGPQ 277 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKN-AELKFNFGE 244 + D IG G + F++NGK L ++ +K+Q LFPA + NFG+ Sbjct 278 YVQGDVIGVGYRPRTGTIFFTRNGKKLE---DVAHGLKSQNLFPAVGANGPCTVHVNFGQ 334 Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F F + G + G+ Q + Sbjct 335 SGFVFIEANVKKWGLAPMTGSLAPPPPYGSEQGS 368 >sp|P15043|RECQ_ECOLI ATP-dependent DNA helicase RecQ OS=Escherichia coli (strain K12) OX=83333 GN=recQ PE=1 SV=5 Length=609 Score = 104 bits (260), Expect = 5e-22, Method: Composition-based stats. Identities = 67/411 (16%), Positives = 131/411 (32%), Gaps = 80/411 (19%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L+ FG ++F+ ++ + D +V G + Q L ++V P Sbjct 17 LQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSP--- 73 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV---DIVVGTPGRLDDLV 354 L + + Q + + R+Q + G I RL + Sbjct 74 LISLMKDQVDQLQA-----NGVAAACLNSTQTREQQLEVMTGCRTGQI------RLLYIA 122 Query 355 STGKLNLSQVRFL-----VL---DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 + + + L VL DEA + G+ + P+ + G+ Q Sbjct 123 PERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGH--------DFRPEYAALGQLRQ---- 170 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 FPT + + DT +V + D L + Sbjct 171 -----------------RFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQ--------- 204 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 ++ N M E K L + +R ++E + II+C ++ ++ Sbjct 205 ------ISSFDRPNIRYMLMEKFKPL--DQLMRYVQEQRGKSGIIYCNSRAKVEDTAARL 256 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 +G S H + + R E+F++ D++ ++ T GI+ V + Sbjct 257 QSKG---------ISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRF 307 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 V++ +P ++Y GR GR A+ + +G Sbjct 308 VVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQG 358 Score = 46.7 bits (109), Expect = 8e-04, Method: Composition-based stats. Identities = 51/371 (14%), Positives = 97/371 (26%), Gaps = 77/371 (21%) Query 7 MGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 + + Q ++E + Q E I +L G D L+ TG GK+ + IP + Sbjct 7 LNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALL--- 63 Query 66 ETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRAT 125 + V++ D+ C + Sbjct 64 ---------------LNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVM 108 Query 126 KGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEE 185 G CR G + N F + Sbjct 109 TG-----------------CRTGQIRLLY------------IAPERLMLDN--FLEHLAH 137 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ-ALFPACVLK---NAELKFN 241 + L +D+ H S+ G D + ++ + P L + + + Sbjct 138 WNP-----VLLAVDEAHCI-SQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQD 191 Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQ 301 P + + Y++ + Q+ + +I SR Sbjct 192 IVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSR----- 246 Query 302 TLNNIKQFKKYIDNPKLRELLIIGG----VAARDQLSVLENGVDIVVGTPGRLDDLVSTG 357 ++ + + + G V A Q + + IVV T + Sbjct 247 --AKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVAT------VAFGM 298 Query 358 KLNLSQVRFLV 368 +N VRF+V Sbjct 299 GINKPNVRFVV 309 >sp|Q9VGI8|BLM_DROME RecQ-like DNA helicase Blm OS=Drosophila melanogaster OX=7227 GN=Blm PE=1 SV=1 Length=1487 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 64/418 (15%), Positives = 126/418 (30%), Gaps = 74/418 (18%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L ++FG + F+ A D +++ G + Q + +++ P + Sbjct 729 LSYSFGLKSFRPNQLQVINATLLGNDCFVLMPTGGGKSLCYQLPAILTEGVTIVISPLKS 788 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD------QLSVLENGVDIVVGTP---- 347 L + I + + + G D L V ++ TP Sbjct 789 L---IFDQINKLASL----DICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKIS 841 Query 348 --GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 R D + T N + + V+DEA + G+ + ++ + + I Sbjct 842 SSARFQDTLDTLNSN-NYISRFVIDEAHCVSQWGH--DFRPDYKKLGVLKKRFPNVPTIA 898 Query 406 CSAT-LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +AT + L++ + W +S++ Sbjct 899 LTATATPRVRLDILAQLNLKNCKW--------------------------FLSSFNRSNL 932 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 R + K + S + S+ II+C ++ +CD + Sbjct 933 RYRVLPKKGVSTLDDISRYIRSKPQHF----------------SGIIYCLSRKECDETSK 976 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 + G V H +R+ + + G +R + T GID V Sbjct 977 KMCKDG---------VRAVSYHAGLTDTDRESRQKDWLTGKMRVICATVAFGMGIDKPDV 1027 Query 585 PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 +V++ +LP + Y GR GR + I + S YN + Sbjct 1028 RFVLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYSDMLRIKKMLDSDKALQYNVK 1085 >sp|O18017|BLM_CAEEL RecQ-like DNA helicase blm-1 OS=Caenorhabditis elegans OX=6239 GN=him-6 PE=1 SV=2 Length=988 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 64/414 (15%), Positives = 123/414 (30%), Gaps = 77/414 (19%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEP 294 LK FG +F+ K ++ D +++ +G + Q + ++V P Sbjct 236 YDTLKSKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSP 295 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDI--VVGTP- 347 R L E +K+ + + + A Q + I + TP Sbjct 296 LRSLIEDQKMKMKELG-------IGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPE 348 Query 348 -----GRLDDLVSTGKLNLSQVRFL---VLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 GRL ++ +L + L V+DEA + G+ + P T Sbjct 349 KISASGRL----NSVFFDLHRRGLLARFVIDEAHCVSQWGH--------DFRPDYT---- 392 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 + L EK + P + + P V + + +L+ Sbjct 393 --------------KLSSLREKYANPPVPIIALTATATPKIVTDARDHLKMQNSKLF--- 435 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 + V + ++ +K Y I++C ++ +C Sbjct 436 -----ISSFVRDNLKYDLIPKAARSLINVVEKMKQLY--------PGKSGIVYCLSRKEC 482 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + ++ + G S H + R + + T GI Sbjct 483 ETVQMMLTKAG---------LSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMGI 533 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 D V +VI+ +LP + Y GR GR + L + + Sbjct 534 DKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEE 587 Score = 38.2 bits (87), Expect = 0.31, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 34/106 (32%), Gaps = 16/106 (15%) Query 8 GVMPEIAQAVE-EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 + E+ ++ + + Q + I L G D + TG+GK+ + +P + + Sbjct 230 DMNKELYDTLKSKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVIL--- 286 Query 67 TLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQ 112 + S L + + IG + L Sbjct 287 ------------PGVTVVVSPLRSLIEDQKMKMKELGIGCEALTAD 320 >sp|Q8L840|RQL4A_ARATH ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1 Length=1188 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 68/389 (17%), Positives = 129/389 (33%), Gaps = 77/389 (20%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQ 301 FG F+ ++ A D +++ G + Q L L++ P L Sbjct 449 FGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICGGITLVISP---LVSL 505 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN------GVDIVVGTPGRLD--DL 353 + I + + + G+ +QL + + ++ TP ++ D Sbjct 506 IQDQIMNLLQ----ANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDS 561 Query 354 VSTGKLNLSQVRFL---VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 + NL+ L V+DEA + G+ + + + + V+ +AT Sbjct 562 LLRHLENLNSRGLLARFVIDEAHCVSQWGH--DFRPDYQSLGILKQKFPNIPVLALTAT- 618 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 SV + V + VN Sbjct 619 ----------------------ATASVKEDVVQALGLVN--------------------- 635 Query 471 AKDNTRPGANSPEMWSEAIKILKG--EYAVRAIKEHKMDQA-IIFCRTKIDCDNLEQYFI 527 R N P +W + K E + IKE+ D+ II+C +++DC+ + + Sbjct 636 -CVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQ 694 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + G HG +P +R ++ K ++ + T GI+ V +V Sbjct 695 EFG---------HKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFV 745 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAI 616 I+ +LP + Y GR GR + + Sbjct 746 IHHSLPKSIEGYHQECGRAGRDGQRSSCV 774 Score = 35.5 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 11/37 (30%), Positives = 17/37 (46%), Gaps = 0/37 (0%) Query 27 DIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 Q E I + G DV + TG GK+ + +P + Sbjct 456 PNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALIC 492 >sp|Q09811|HUS2_SCHPO ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rqh1 PE=1 SV=1 Length=1328 Score = 104 bits (259), Expect = 2e-21, Method: Composition-based stats. Identities = 46/269 (17%), Positives = 86/269 (32%), Gaps = 28/269 (10%) Query 418 LSEKIMHFPTWVDLKGEDSVPDTVH-------HVVVPVNPKTDRLWERLGKSHIRTDDVH 470 L+ ++ V G D PD + +P T E + K I T + Sbjct 645 LARIVIDEAHCVSHWGHDFRPDYKQLGLLRDRYQGIPFMALTATANEIVKKDIINTLRME 704 Query 471 AKDNTRPGANSPEMWSEAI--KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 + N P ++ E K L E H + II+C ++ C+ + Sbjct 705 NCLELKSSFNRPNLFYEIKPKKDLYTELYRFISNGHLHESGIIYCLSRTSCEQVAAKLRN 764 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 G H + ER++ ++ G + ++ T G+D V +VI Sbjct 765 DYG--------LKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGMGVDKGDVRFVI 816 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGG 648 + + P + Y GR GR + I + + + + S DG Sbjct 817 HHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKDHVTFQKLIMSG-----------DGD 865 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPDI 677 + Q+L ++ + + Sbjct 866 AETKERQRQMLRQVIQFCENKTDCRRKQV 894 >sp|Q0WVW7|RQL5_ARATH ATP-dependent DNA helicase Q-like 5 OS=Arabidopsis thaliana OX=3702 GN=RECQL5 PE=2 SV=2 Length=911 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 71/458 (16%), Positives = 148/458 (32%), Gaps = 76/458 (17%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEP 294 L +G + F+ + +V +G + Q + L+V P Sbjct 258 TKLLNLVYGYDSFRDGQLQAIKMILGGSSTMLVLPTGAGKSLCYQIPAMILPGITLVVSP 317 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD---QLSVLENGV-DIVVGTPGRL 350 L ++ +K ++ L+ + L L+ G+ ++ +P RL Sbjct 318 ---LVSLMIDQLKHL-----PSIIKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERL 369 Query 351 D--DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 + +S +++LS V +V+DEA + ++ S + ++ S Sbjct 370 LNVEFLSMFRMSLS-VSLVVVDEAHCVSEWSHNF-----------RPSYMRLKASMLFS- 416 Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDD 468 +LK E + + T L + I + + Sbjct 417 ---------------------ELKAECILA-------MTATATTMTLQAVMSSLEIPSTN 448 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 + K R S A ++ + + ++ I++C+ + + D + +Y Sbjct 449 LIQKSQLRDNFELSVSLSGANRMKDLLILMESPPYKEIRSIIVYCKFQYETDMISKYL-- 506 Query 529 QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 + + + H +R + E F +R ++ T G+D V VI Sbjct 507 -------RDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAFGMGLDKGDVGAVI 559 Query 589 NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY--------- 639 + ++P + YV IGR GR R+ + + S G Y Sbjct 560 HFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDNDTYLKLRSLAHSDGVDEYAVGKFLTHV 619 Query 640 ---NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 T+ E + + Q EE + ++ +E Sbjct 620 FSTETKQHEKICSLVIESASQKFDMKEEVMQTILTHLE 657 >sp|A1CNW8|SSH4_ASPCL Protein ssh4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=ssh4 PE=3 SV=1 Length=511 Score = 101 bits (252), Expect = 3e-21, Method: Composition-based stats. Identities = 46/193 (24%), Positives = 69/193 (36%), Gaps = 24/193 (12%) Query 129 MKGKHYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQF--DN 181 +Y+E +D+ L VG +T L G K+ + TG + HN+ F Sbjct 219 QNDVYYWEAKIYDKPENTLVSVGMTTKPYPLFRLPGFHKYSVAYSSTGHRRHNQPFASTP 278 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKN-AELKF 240 YG + D IG G + F++NGK L ++ K Q FP + Sbjct 279 YGPPLSQGDVIGVGYRPRSGTIFFTRNGKKLE---DVVHAAKTQNFFPTVGANGPCTVHV 335 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPS-RELA 299 NFG+ F F + G + G+ Q + I+ S RE A Sbjct 336 NFGQMGFVFIEANVKKWGLAPMTGSLAPPPPYGSEQGS------------ILLESGRESA 383 Query 300 EQTLNNIKQFKKY 312 Q + Q Y Sbjct 384 AQISQRVYQEAGY 396 >sp|P40724|RECQ_SALTY ATP-dependent DNA helicase RecQ OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=recQ PE=3 SV=3 Length=609 Score = 102 bits (253), Expect = 4e-21, Method: Composition-based stats. Identities = 64/410 (16%), Positives = 125/410 (30%), Gaps = 78/410 (19%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 L+ FG ++F+ + D +V G + Q L ++V P Sbjct 17 LQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVSP--- 73 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE--NGVDIVVGTPGRLDDLVS 355 L + + Q + + + QL V+ I RL + Sbjct 74 LISLMKDQVDQLLA----NGVAAACLNSTQSREQQLEVMAGCRTGQI------RLLYIAP 123 Query 356 TGKL---NLSQVRF-----LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 + L + L +DEA + G+ + P+ + G+ Q Sbjct 124 ERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGH--------DFRPEYAALGQLRQ----- 170 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 FP + + DT ++ + D L + Sbjct 171 ----------------RFPALPFMALTATADDTTRQDIIRLLGLNDPLIQ---------- 204 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 ++ N M E K L + +R ++E + II+C ++ ++ Sbjct 205 -----ISSFDRPNIRYMLMEKFKPL--DQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQ 257 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 +G S H + R E+F++ D++ ++ T GI+ V +V Sbjct 258 SRG---------ISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAFGMGINKPNVRFV 308 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 ++ +P ++Y GR GR A+ + G Sbjct 309 VHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAG 358 Score = 44.0 bits (102), Expect = 0.005, Method: Composition-based stats. Identities = 48/371 (13%), Positives = 95/371 (26%), Gaps = 77/371 (21%) Query 7 MGVMPEIAQAVEE-MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 + + Q ++E + Q I L G D L+ TG GK+ + IP + Sbjct 7 LNLESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALL--- 63 Query 66 ETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRAT 125 + V++ D+ C + Sbjct 64 ---------------LDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVM 108 Query 126 KGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEE 185 G CR G + N F ++ Sbjct 109 AG-----------------CRTGQIRLLY------------IAPERLMLDN--FLDHLAH 137 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQ-ALFPACVLK---NAELKFN 241 + L +D+ H S+ G D + ++ + P L + + + Sbjct 138 WNP-----VLLAVDEAHCI-SQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQD 191 Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQ 301 P + + Y++ + Q+ + +I SR Sbjct 192 IIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSR----- 246 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGV----AARDQLSVLENGVDIVVGTPGRLDDLVSTG 357 ++ + + + G+ Q + + IVV T + Sbjct 247 --AKVEDTAARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVAT------VAFGM 298 Query 358 KLNLSQVRFLV 368 +N VRF+V Sbjct 299 GINKPNVRFVV 309 >sp|Q9TXJ8|RECQ1_CAEEL Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis elegans OX=6239 GN=K02F3.12 PE=3 SV=3 Length=631 Score = 102 bits (253), Expect = 4e-21, Method: Composition-based stats. Identities = 65/400 (16%), Positives = 132/400 (33%), Gaps = 68/400 (17%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP 287 FP LK F E+F+ + A+ D ++ S G + Q L Sbjct 91 FPWSDEATKILKEQFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALLANG 150 Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD------ 341 AL+V P L + I Q + + + + + V + + Sbjct 151 LALVVSP---LISLVEDQILQLRSL----GIDSSSLNANTSKEEAKRVEDAITNKDSKFR 203 Query 342 IVVGTPGRL---DDLVST--GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 ++ TP +L +++ L++ ++ + +DE G+ ++ + + Sbjct 204 LLYVTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDEVHCCSQWGH--DFRTDYSFLNVLKR 261 Query 397 DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW 456 K + ++ +AT S + + + + G + + + VV D Sbjct 262 QFKGVPILGLTATATSNVLDDVKDMLGIQAALTFRAGFNR--SNLKYKVVQKPGSEDECT 319 Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 E + K+ ++ II+C ++ Sbjct 320 EEIAKT-------------------------------------IKRDFAGQTGIIYCLSR 342 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 DC+ + + K H H +P +R + + G ++ ++ T Sbjct 343 NDCEKVAKAL---------KSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFG 393 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 GID V +VI+ +LP +NY GR GR + I Sbjct 394 MGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCI 433 Score = 35.9 bits (81), Expect = 1.6, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 20/44 (45%), Gaps = 0/44 (0%) Query 18 EEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVI 61 E+ +Q +I ++ D ++ TG GK+ + +P + Sbjct 103 EQFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146 >sp|Q57742|HELX_METJA Uncharacterized ATP-dependent helicase MJ0294 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ0294 PE=3 SV=1 Length=841 Score = 102 bits (254), Expect = 4e-21, Method: Composition-based stats. Identities = 81/472 (17%), Positives = 158/472 (33%), Gaps = 80/472 (17%) Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNA------------QVTQTKFLPNAPKALI 291 + F P + + + + I SG +++ L + L Sbjct 32 YKTFTPPQRYAIKEIHEGKNVLICSPTGSGKTLSAFLAGINELIKLSMENKLEDRIYILY 91 Query 292 VEPSRELAEQTLNNIKQFKKYIDNP---------KLRELLIIGGVAARDQLSVLENGVDI 342 V P R L N+K+ K I + ++R + + + +L+ I Sbjct 92 VSPLRALNNDIERNLKEPLKEIYDVAKEIGIELDEIRVAVRTSDTTSSQKQRMLKKPPHI 151 Query 343 VVGTPGRLDDLVSTGKLN--LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 ++ TP L +++ K + LS ++++++DE L ++ ++ ++ ++ + + Sbjct 152 LITTPESLAIALNSPKFSQLLSGIKYVIVDEIHALTNKR-GVHLSLSLERLNRIANFIRI 210 Query 401 LQVIVCSATLHSF-DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 SAT+H +V K VD+ + + V Sbjct 211 G----LSATIHPLTEVAKFLVGNGRDCYIVDVSYKKEIEIKV------------------ 248 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 P + SE I + I+EHK +IF T+ Sbjct 249 ---------------ISPVDDFIYTPSEEISKRLYNLLKKLIEEHKT--TLIFTNTRSAT 291 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + + Y Q G + H R + E+ KKG++R I + G+ Sbjct 292 ERVAFYLKQLGVEKVETH--------HSSLSREHRLEVEEKLKKGEIRVCISSTSLELGV 343 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVG-RAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 DI + VI + P + RIGR G R I + + V V + K Sbjct 344 DIGSIDLVILLGSPKSVSRALQRIGRSGHRLHEKSKGIIIPFDRDDLVENVVLAYDAKIG 403 Query 639 YNTRLKEDGGCTIWYNE------MQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 R+ C + ++ + +++E N I + P + +F Sbjct 404 KIDRIHIPKNCLDVLAQHLVGMALEKVWDVDEAYNL-IKKAYPYKDLSKKDF 454 Score = 46.7 bits (109), Expect = 9e-04, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 30/74 (41%), Gaps = 5/74 (7%) Query 19 EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTG-AFSIPVIQIVYETLKDQQEGKKG 77 + + T Q +I I G +VL+ + TGSGKT AF + + E +K E K Sbjct 29 KRKYKTFTPPQRYAIKEIHEGKNVLICSPTGSGKTLSAF----LAGINELIKLSMENKLE 84 Query 78 KTTIKTGASVLNKW 91 S L Sbjct 85 DRIYILYVSPLRAL 98 >sp|P95949|HELX_SACS2 Uncharacterized ATP-dependent helicase SSO0112 OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=SSO0112 PE=3 SV=1 Length=875 Score = 102 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 61/393 (16%), Positives = 133/393 (34%), Gaps = 58/393 (15%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGN------------AQVTQTKFLPNAPKALIVEP 294 F P + + + + + SG ++ L + A+ + P Sbjct 31 FTPPQRAAIPLIKQNYNVLVSSPTGSGKTLAAFLGILDSLFELGDNNELEDKVYAIYISP 90 Query 295 SRELAEQTLNNI----KQFKKYIDN-PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 R L N+ + ++ P +R + ++ +L+ I++ TP Sbjct 91 LRALNNDMQRNLLEPLNELRQVNSKLPDVRVGIRTSDTTPYEKQKMLKKPPHILITTPES 150 Query 350 LDDLVSTGKLN--LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 +++ K + L+ V+++++DE L + +++ M + + + +++ + S Sbjct 151 FGISITSPKFSQKLTDVKWIIVDEIHELANSKRGAYLSAMLELFRNLITKKEFVRIGL-S 209 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ + V +V DR + + ++ Sbjct 210 ATVSPLE-------------------------EVAQFLV----GKDREYRIVDARFVKPV 240 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 D+ + +S E ++ KG Y + K +IF T+ + + Sbjct 241 DIKVISPVKDLVHSSES-----EVDKGIYKTILNEVKKHRTTLIFTNTRHATERVAYKLR 295 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 + + H R E+ KKG ++ ++ + GIDI + V Sbjct 296 KLAENEKVFDVD-AIEAHHSSLSRDVRLDVEEKLKKGILKVVVSSTSLELGIDIGYIDLV 354 Query 588 INVTLPDEKQNYVHRIGRVGRAER---MGLAIS 617 I ++ P + RIGR G R G I Sbjct 355 ILLSSPKSVSRLLQRIGRAGHHIRSISKGRVIV 387 Score = 54.4 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 52/315 (17%), Positives = 99/315 (31%), Gaps = 51/315 (16%) Query 19 EMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQ-EGKKG 77 + T Q +IPLI +VL+++ TGSGKT A + ++ ++E + + E K Sbjct 25 RQKYTTFTPPQRAAIPLIKQNYNVLVSSPTGSGKTLAAFLGILDSLFELGDNNELEDKVY 84 Query 78 KTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEV 137 I ++ N Q N + + + L + G + Sbjct 85 AIYISPLRALNNDMQRNLLEPLNELRQVNSKL----------------PDVRVGIRTSDT 128 Query 138 SCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLD 197 + +++ + L T FG T K K D ++ + D I Sbjct 129 TPYEKQKM-----LKKPPHILITTPESFGISITSPKFSQKLTD---VKWIIVDEI----- 175 Query 198 IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLK--------------NAELKFNFG 243 + SK G L E+ ++ + F L + ++ Sbjct 176 ---HELANSKRGAYLSAMLELFRNLITKKEFVRIGLSATVSPLEEVAQFLVGKDREYRIV 232 Query 244 EEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL 303 + F P ++ K G + + + LI +R T Sbjct 233 DARFVKPVDIKVISPVKDLVHSSESEVDKGIYKTILNEVKKHRTT-LIFTNTR---HATE 288 Query 304 NNIKQFKKYIDNPKL 318 + +K +N K+ Sbjct 289 RVAYKLRKLAENEKV 303 >sp|Q1E2D2|SSH4_COCIM Protein SSH4 OS=Coccidioides immitis (strain RS) OX=246410 GN=SSH4 PE=3 SV=1 Length=494 Score = 98.7 bits (244), Expect = 3e-20, Method: Composition-based stats. Identities = 38/154 (25%), Positives = 61/154 (40%), Gaps = 11/154 (7%) Query 133 HYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YGEE 185 +Y+E +D+ L +G +T L G K + TG + HN+ F YG E Sbjct 217 YYWEAKIYDKPETSLISIGMTTKPYPLFRLPGFHKTSISYQSTGHRRHNQPFTPTLYGPE 276 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKN-AELKFNFGE 244 F D +G G + F++NGK L ++ +K+Q FP + NFG+ Sbjct 277 FVQGDVVGVGYRPRSGTIFFTRNGKKLE---DVAHGLKSQNFFPTVGANGPCTVHVNFGQ 333 Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F F + G + G+ Q + Sbjct 334 LGFVFIEANVKKWGLAPMTGSLAPPPPYGSEQGS 367 >sp|Q54CH6|IF4AX_DICDI Putative eukaryotic initiation factor 4A-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0292914 PE=5 SV=1 Length=248 Score = 94.4 bits (233), Expect = 3e-20, Method: Composition-based stats. Identities = 31/105 (30%), Positives = 55/105 (52%), Gaps = 2/105 (2%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKY-IDNPKLRELLIIGGVAARDQLSVLENG-VDIVV 344 P+ L++ P++EL++ T +N + L IGGV + +L+ G I++ Sbjct 100 PQILMILPTKELSQTTKVIYSSLGGGENNNNDFKVLSCIGGVKISMDIEILKKGNTQILL 159 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 GTPGR+ DL S + + ++ LV DE D +LS+G+ + + Sbjct 160 GTPGRISDLFSRKRFDTDNIKILVFDELDEILSRGFECQLEDIIK 204 Score = 52.1 bits (123), Expect = 5e-06, Method: Composition-based stats. Identities = 20/144 (14%), Positives = 50/144 (35%), Gaps = 2/144 (1%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 F+ +G+ ++ ++ T Q E I I +V++ + G+G+T + I + Sbjct 16 FASLGLNEQLINNIKRYGITKLTPFQMEVIKEIKENSNVIVDSIEGTGRTISLIIGTLDK 75 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCR 123 + ET + Q++ ++ + S + P S Sbjct 76 IDETKQQQEQEQQERQQTDQQFSFPQILMILPTKELSQTTKVIYSSLGGGENNNNDFKVL 135 Query 124 ATKGLMKGKHYYEVSCHDQGLCRV 147 + + K ++ +G ++ Sbjct 136 S--CIGGVKISMDIEILKKGNTQI 157 >sp|Q5UPX0|YR290_MIMIV Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R290 PE=3 SV=1 Length=548 Score = 98.3 bits (243), Expect = 4e-20, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 96/294 (33%), Gaps = 29/294 (10%) Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG--EYAVRAIKE 503 VP+ T + K + + + + + P ++ E K V I + Sbjct 179 VPILALTATATNIVAKDICKVLQLKTNEPIKASFDRPNLYLEVRTKSKNPANDIVPIINK 238 Query 504 HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK 563 + II+C TK + + H+ C H + + F Sbjct 239 YPNQSVIIYCLTKKETQKIADILT---------VHKVVCGIYHAGLSNEHKTKTHTNFIN 289 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 ++ ++ T GI+ V VI+ P + Y IGR GR + + Sbjct 290 NKIKIVVATIAFGMGINKPDVRVVIHYGAPKNIEGYYQEIGRAGRDGEKSYCYAFYNFQD 349 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 + + ++ ++ LL ++++++ K+ ++ Sbjct 350 FMIQRRF------------ISQNNNPNYQKTQLALLEQMKKYVT----LRTCRRKILLEY 393 Query 684 FDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLF 737 FD + +K H +I+ V ++ EA+ + +PN+ F Sbjct 394 FDEETK--EKCDFCDNCCGVHKNIVNENVTSKQNVQSEAKLIIELIESIPNRNF 445 Score = 36.6 bits (83), Expect = 0.83, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 34/116 (29%), Gaps = 18/116 (16%) Query 20 MDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKT 79 + Q E I ++ G DV T +GK+ F IP + Sbjct 25 YGYDNFRPRQYEIINKVINGEDVCAILMTSAGKSLCFQIPAL------------------ 66 Query 80 TIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYY 135 + A +++ D+ CC + V+ R K K Y Sbjct 67 YLDKPAIIISPLISLMEDQRLILEKLGISSCCYNSNVENKAQMRKDIMQFKYKFIY 122 >sp|O94762|RECQ5_HUMAN ATP-dependent DNA helicase Q5 OS=Homo sapiens OX=9606 GN=RECQL5 PE=1 SV=2 Length=991 Score = 99.0 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 71/446 (16%), Positives = 132/446 (30%), Gaps = 72/446 (16%) Query 236 AELKFNFGEEEFKFP-PKDGFVALSKA-PDGYIVKSQHSGNAQVTQTKFLPNAPKALIVE 293 + LK FG + FK P + +A+ K D ++ +G + Q L ++V Sbjct 18 STLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAKGITIVVS 77 Query 294 PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVD--IVVGTP 347 P L + + ++ K+R + ++A+++ +L I+ TP Sbjct 78 P---LIALIQDQV----DHLLTLKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITP 130 Query 348 ---------GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 L+ LVS L+ +LV+DEA + G+ + + + Sbjct 131 EMAASSSFQPTLNSLVSRHLLS-----YLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGH 185 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + +AT + + P + KT Sbjct 186 APCVALTATAT-PQVQEDVFAALHLKKPVAIF--------------------KTPCFRAN 224 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 L + + + EA K L G I++CRT+ Sbjct 225 LFYDVQFKELISDPYGNLKDFCLKALGQEADKGLSGC-------------GIVYCRTREA 271 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 C+ L +G + H K ER + + V ++ T G Sbjct 272 CEQLAIELSCRG---------VNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMG 322 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 +D V +V + + Y GR GR + + + Sbjct 323 VDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKL 382 Query 639 YNTRLKEDGGCTIWYNEMQLLSEIEE 664 R + L++ EE Sbjct 383 QEKRGNKASDKATIMAFDALVTFCEE 408 Score = 36.6 bits (83), Expect = 0.90, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (3%) Query 26 TDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 T +Q + ++ G DV + TG+GK+ + +P + Sbjct 31 TPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPAL 67 >sp|P73421|RECQ_SYNY3 ATP-dependent DNA helicase RecQ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=recQ PE=3 SV=1 Length=478 Score = 97.1 bits (240), Expect = 7e-20, Method: Composition-based stats. Identities = 31/130 (24%), Positives = 61/130 (47%), Gaps = 9/130 (7%) Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPH 552 + + R + +H + +I+ RT+ NL Q+ ++G F HG PH Sbjct 226 RRQQLRRFLLKHLQESGLIYVRTRTMAINLAQWLQERG---------FDSEAYHGGLGPH 276 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 +R+Q +++ G + ++CT+ GID +V++ P +Y+ +GR GR + Sbjct 277 QRRQLEQKWLTGQISSVVCTNAFGLGIDKPDTRWVLHYQAPLMLMDYLQEVGRAGRDLQP 336 Query 613 GLAISLVATE 622 ++LV+ Sbjct 337 AECLTLVSEP 346 >sp|O27830|HELX_METTH Uncharacterized ATP-dependent helicase MTH_1802 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=MTH_1802 PE=3 SV=1 Length=862 Score = 98.3 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 59/363 (16%), Positives = 136/363 (37%), Gaps = 49/363 (13%) Query 259 SKAPDGYIVKSQHSGNAQVTQTK---FLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN 315 S G + + S +++T+ L ++ + + P + L N+++ I + Sbjct 54 SPTGSGKTLTAFLSIISELTRLADDGELEDSVYCIYISPLKALDNDIERNLEEPLSAIRD 113 Query 316 P--------KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN--LSQVR 365 ++R+ + G + ++ +L+ I++ TP L L+ K LS VR Sbjct 114 IAAGEGRDLEIRKAVRTGDTTSYERSRMLKKPPHILITTPETLSILLVAPKFREKLSTVR 173 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 ++++DE L ++ ++ + D R+ + SAT+H +++++ Sbjct 174 YVIVDEIHSLADNKRGVHLSLSLERLQHLVGDFTRIGL---SATVHP--LERVAR----- 223 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 V + + L + D+ + A+ E+ Sbjct 224 ----------------FLVGYSYGSERECLIVDVSYLKELDIDLICPVDDIVAADPEEIG 267 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 + IL I++H+ +IF T+ +++ + + + Sbjct 268 NALYDILHD-----LIEDHRT--TLIFTNTRSGTESVVYNLKSRFPESYSDS---NIMAH 317 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 H R + E+ K+G+++ ++ + GIDI + V+ ++ P + RIGR Sbjct 318 HSSLSREIRLETEEKLKRGELKAVVSSTSLELGIDIGYIDLVVLLSSPKSVSRALQRIGR 377 Query 606 VGR 608 G Sbjct 378 SGH 380 Score = 43.6 bits (101), Expect = 0.007, Method: Composition-based stats. Identities = 16/62 (26%), Positives = 30/62 (48%), Gaps = 1/62 (2%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETL 68 + P +++ + T+ Q +I I G +VL+++ TGSGKT + +I + Sbjct 18 LHPWVSEWFRRT-FDDFTEAQRYAIMDIHRGRNVLVSSPTGSGKTLTAFLSIISELTRLA 76 Query 69 KD 70 D Sbjct 77 DD 78 >sp|Q9VDA0|FANCM_DROME DEAD-box ATP-dependent DNA helicase Fancm OS=Drosophila melanogaster OX=7227 GN=Fancm PE=1 SV=2 Length=1489 Score = 98.3 bits (243), Expect = 1e-19, Method: Composition-based stats. Identities = 50/306 (16%), Positives = 105/306 (34%), Gaps = 18/306 (6%) Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 V + D+ D V+ + L E++ + + G P Sbjct 350 RVFVNNFDADDDGREKFVLARDGNLRNLVEQVRQELGANPLDYTTHAMTNGEVPPLPSDL 409 Query 488 AIKILKGEYAVRAIKEH----KMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK---GHQF 540 K E + + +H +AI+FC + + + +Q + G Sbjct 410 DFGHAKYEKLRQVLVQHFQANPDSRAIVFCEYRESVMLIHRLLLQHRPVLRPRCFVGQGS 469 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP-DEKQNY 599 + + ++ Q + F+ G L+ T + G+D+ V ++ + + Sbjct 470 TVGASYA-LTQKQQLQIMTDFRSGTSNVLVATSIGEEGLDVGEVEMIVCFDICSTNPTRF 528 Query 600 VHRIGRVGRAERMGLAISLVATEKE-KVWYHVCSSR---GKGCYNTRLKEDGGCTIWYNE 655 + RIGR GR + G + LV +E +V V +++ K N+ + + N Sbjct 529 IQRIGRTGRK-KNGEVVMLVTEGREQQVLKDVLANKDQINKKLLNSSVVKLSLYE--QNP 585 Query 656 MQLLSEIEEHLNCT-ISQVEPDIKVPVDEFDGKVTYGQKRAAG-GGSYKGHVDILAPTVQ 713 + S+ + + V + P K + +K+ GS + + PT Sbjct 586 RMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRKQPVAQTGSLRKYFKESPPTES 645 Query 714 ELAALE 719 + L+ Sbjct 646 QQGILQ 651 Score = 39.7 bits (91), Expect = 0.12, Method: Composition-based stats. Identities = 31/233 (13%), Positives = 72/233 (31%), Gaps = 21/233 (9%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 + + P+R L Q ++ ++ + ++ + G + + + + + TP Sbjct 105 VFMAPTRPLVSQQIHASQKIMPFPSEDTVQ---LTGQLPRPKRAELWASK-RVFFATPQV 160 Query 350 LD-DLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 + D++ ++ +V+DEA + + + + +++ Sbjct 161 VHSDMLEADGECSFPFGSIKLIVVDEAHRAKGRYAYTQVADCL------MARNRYFRMLA 214 Query 406 CSATL--HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWER 458 SAT DV + + V V +H +VV + + ER Sbjct 215 LSATPGRTMEDVAAVCRNLYISNLQVRWDTSIDVQPYIHRRTIRTIVVSLKERIKEPRER 274 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 L + + G + + K A + D II Sbjct 275 LLQIIEPYLRQLMEAEIFKGNKGTVSRNSLLFEQKSFVERSAQGQRHPDHNII 327 >sp|A1D1S7|SSH4_NEOFI Protein ssh4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=ssh4 PE=3 SV=1 Length=507 Score = 96.7 bits (239), Expect = 1e-19, Method: Composition-based stats. Identities = 40/199 (20%), Positives = 68/199 (34%), Gaps = 24/199 (12%) Query 129 MKGKHYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFD--N 181 +Y+E +++ +G +T L G K + TG + +N+ F Sbjct 219 QNDVYYWEAKIYEKPESTHISIGMTTKPYPLFRLPGFHKTSVAYLSTGHRRYNQPFSATP 278 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKN-AELKF 240 YG D +G G + F++NGK L ++ K Q FP + Sbjct 279 YGPPLAQGDVVGVGYRPRSGTIFFTRNGKKLE---DVVHGAKTQNFFPTVGANGPCTVHV 335 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPS-RELA 299 NFG+ F F + G + G+ Q + I+ S RE A Sbjct 336 NFGQMGFVFIEANVKKWGLAPMTGSLAPPPPYGSEQGS------------ILLESGRESA 383 Query 300 EQTLNNIKQFKKYIDNPKL 318 Q + Q + ++ Sbjct 384 AQISQRVYQDARTNSTVRI 402 >sp|P50729|RECS_BACSU Probable ATP-dependent DNA helicase RecS OS=Bacillus subtilis (strain 168) OX=224308 GN=recS PE=3 SV=1 Length=496 Score = 96.4 bits (238), Expect = 1e-19, Method: Composition-based stats. Identities = 68/427 (16%), Positives = 131/427 (31%), Gaps = 61/427 (14%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEP 294 L FG FK +D ++ D + G + Q LIV P Sbjct 5 QQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVLIVSP 64 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN--GVDIVVGTPGRLDD 352 L + ++Q K + R + + +++ VLE+ + +P L Sbjct 65 ---LLSLMEDQVQQLKARGEK---RAAALNSMLNRQERQFVLEHIHRYKFLYLSPEALQS 118 Query 353 LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS 412 KL + V+DEA + G+ ++++ Q+ V+ +AT Sbjct 119 PYVLEKLKSVPISLFVIDEAHCISEWGH--DFRPDYSKLGQLRKKLGHPPVLALTATATK 176 Query 413 FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAK 472 ++ + + + H V +N Sbjct 177 ETLQDVMNLL-----------------ELQHAVRHLNS---------------------- 197 Query 473 DNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGG 532 N A + V + E+ I++C T+ L + Sbjct 198 ---VNRPNIALRVENAADTAEKIDRVIQLVENLQGPGIVYCPTRKWAKELAGEIKSKTSS 254 Query 533 PDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTL 592 HG + +R ++F + + CT+ G+D + YVI+ L Sbjct 255 RADF--------YHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRYVIHFHL 306 Query 593 PDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT-RLKEDGGCTI 651 P + ++ IGR GR + ++I L A ++ + + T Sbjct 307 PQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVTAEEIADVIRVLEKTE 366 Query 652 WYNEMQL 658 +E +L Sbjct 367 ERDERRL 373 Score = 37.4 bits (85), Expect = 0.47, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 22/49 (45%), Gaps = 1/49 (2%) Query 12 EIAQAVEEM-DWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIP 59 ++ Q + + + Q + I IL G D + TG GK+ + +P Sbjct 3 KLQQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQLP 51 >sp|Q4WRW0|SSH4_ASPFU Protein ssh4 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=ssh4 PE=3 SV=2 Length=507 Score = 96.4 bits (238), Expect = 1e-19, Method: Composition-based stats. Identities = 41/199 (21%), Positives = 69/199 (35%), Gaps = 24/199 (12%) Query 129 MKGKHYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFD--N 181 +Y+E +++ L +G +T L G K + TG + +N+ F Sbjct 219 QNDVYYWEAKIYEKPESTLISIGMTTKPYPLFRLPGFHKTSVAYLSTGHRRYNQPFSASP 278 Query 182 YGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKN-AELKF 240 YG D +G G + F++NGK L ++ K Q FP + Sbjct 279 YGPALAQGDVVGVGYRPRSGTIFFTRNGKKLE---DVVHGAKTQNFFPTVGANGPCTVHV 335 Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPS-RELA 299 NFG+ F F + G + G+ Q + I+ S RE A Sbjct 336 NFGQMGFVFIEANVKKWGLAPMTGSLAPPPPYGSEQGS------------ILLESGRESA 383 Query 300 EQTLNNIKQFKKYIDNPKL 318 Q + Q + ++ Sbjct 384 AQISQRVYQDARTSSTVRI 402 >sp|O93530|WRN_XENLA Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Xenopus laevis OX=8355 GN=wrn PE=1 SV=1 Length=1436 Score = 97.9 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 72/473 (15%), Positives = 152/473 (32%), Gaps = 85/473 (18%) Query 238 LKFNFGEEEFKFPP-KDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSR 296 LK FG FK K L + D +V + G + Q + + +++ P Sbjct 481 LKTYFGHSSFKPVQWKVVHSVLRERRDNLVVMATGYGKSLCYQFAPVYTSGIGIVICP-- 538 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP---GRLDDL 353 L + + Q + + + + V + + ++ TP R L Sbjct 539 -LISLMEDQVLQL----EMSNISSCFLGSAQSKNVLQDVKDGKMRVIYMTPEFCSRGISL 593 Query 354 VSTGKLNLSQ---VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 + +L + + +DEA + G+ + + + + ++ +AT Sbjct 594 LQ----DLDNRYGITLIAIDEAHCISEWGH--DFRSAYRSLGSLKRMLPNVPIVALTATA 647 Query 411 HSFDVKKLSEKI-MHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 + +++ + +H P + ++ + V KT + L + I+ Sbjct 648 SPSIREDITKSLNLHNPQVTCTSFDRP------NLYLDVARKTTNISIDLRQFLIKKQQG 701 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ 529 + I++C T+ + + I+ Sbjct 702 SGWEFEGA-------------------------------TIVYCPTRKTSEQVTAELIKL 730 Query 530 GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN 589 G +C H +R++ RF + ++ ++ T GI+ + VI+ Sbjct 731 G---------IACGTYHAGMGIKQRREVHHRFMRDEIHCVVATVAFGMGINKPDIRKVIH 781 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSR-GKGCYNTRLKEDGG 648 P E ++Y IGR GR +L A H+ KG +LK Sbjct 782 YGAPKEMESYYQEIGRAGRDGLPSCCHALWAQADMNFNRHMLGEIPNKGFREYKLK---- 837 Query 649 CTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSY 701 +L+++E++LN + K+ + F+ K G Sbjct 838 ---------MLTKMEKYLNSS----TCRRKIILSHFEDKQLRKASSGIMGTEK 877 >sp|Q9FT73|RECQ2_ARATH ATP-dependent DNA helicase Q-like 2 OS=Arabidopsis thaliana OX=3702 GN=RECQL2 PE=1 SV=1 Length=705 Score = 97.1 bits (240), Expect = 2e-19, Method: Composition-based stats. Identities = 63/405 (16%), Positives = 139/405 (34%), Gaps = 78/405 (19%) Query 236 AELKFN-FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEP 294 +++FN FG +++ K+ A+ D ++ + G + Q + L+V P Sbjct 78 DDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRGGTTLVVSP 137 Query 295 SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL---SVLENGVD---IVVGTP- 347 L + + + ++ ++ LE G D I+ TP Sbjct 138 ---LLSLIQDQVMGLAAL----GISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPE 190 Query 348 ---------GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 +L+ + G+L+L + DEA G+ + + + + Sbjct 191 KVSKSKRFMSKLEKCHNAGRLSLISI-----DEAHCCSQWGH--DFRPDYKNLSILKTQF 243 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 ++ ++ +AT + V+ +++H P V + P+ + V K+ Sbjct 244 PKVPMVALTAT-ATQKVQNDLIEMLHIPKCVKFVSSVNRPN----LFYSVREKS------ 292 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 A + E + ++ Y+ + I++C ++ + Sbjct 293 --------------------AVGKLVVDEIAEFIRESYS-------NNESGIVYCFSRKE 325 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 C+ + ++G S H D + R++ R+ K ++ ++ T G Sbjct 326 CEQIAGDLRERG---------ISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMG 376 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 I+ V +VI+ +L + Y GR GR I + Sbjct 377 INKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSAD 421 >sp|P85199|RH3_HELAN DEAD-box ATP-dependent RNA helicase 3 (Fragment) OS=Helianthus annuus OX=4232 PE=1 SV=1 Length=234 Score = 91.3 bits (225), Expect = 2e-19, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 46/107 (43%), Gaps = 0/107 (0%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 S +G+ ++ + +E+ IQ + L G D++ A+TG+GKT AF+IP+I+ + Sbjct 123 SRLGLPQKLVETLEKRGITKLFPIQRAVLVPALEGRDIIGRAKTGTGKTLAFAIPIIKRL 182 Query 65 YETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCC 111 E +D + G+ + + A +C Sbjct 183 TEEDEDNRNSLAGRLPRVLVLAPTRELAKQVETEIKEPAPYLRTVCV 229 Score = 53.6 bits (127), Expect = 2e-06, Method: Composition-based stats. Identities = 19/84 (23%), Positives = 34/84 (40%), Gaps = 11/84 (13%) Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNA------PKALIVEPSRELAEQTLN 304 + +K G + ++T+ P+ L++ P+RELA+Q Sbjct 156 EGRDIIGRAKTGTGKTLAFAIPIIKRLTEEDEDNRNSLAGRLPRVLVLAPTRELAKQVET 215 Query 305 NIKQFKKYIDNPKLRELLIIGGVA 328 IK+ P LR + + GGV+ Sbjct 216 EIKE-----PAPYLRTVCVYGGVS 234 >sp|Q2H679|MRH4_CHAGB ATP-dependent RNA helicase MRH4, mitochondrial OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=MRH4 PE=3 SV=1 Length=576 Score = 96.4 bits (238), Expect = 2e-19, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 124/351 (35%), Gaps = 51/351 (15%) Query 277 VTQTKFLPNA--PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLS 334 + + + PN P+A+++ P+ EL +Q L K+ G S Sbjct 258 IDKFEPHPNHARPRAIVLVPTSELVDQVLAASKK-------------NFPRGQDQTTAAS 304 Query 335 VLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 I T R+ L+S+ S + DEAD L + ++ +++ Sbjct 305 TWSLPPRIFSPT-WRIVTLISSRVCTTSSI-----DEADSLFDRSFAPETSKIVE----- 353 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 + Q+I+CSAT+ L+ + ++P V V+ V+ Sbjct 354 RAMPSLKQLILCSATIPRRLDNYLA-AHFPNIVRIATPNLHAIPRRVQLGVIDVSKDPLP 412 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 SH A+ R + +AI + + R + F Sbjct 413 PTTSWLASHHGLCQTSARPPRRWPSTLVSKGIDAIALHRDTPEHRQSEMLNS-----FTT 467 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 T+ + + + ++ + + G + + ++ TD+ Sbjct 468 TE----------PMRLSKAEVEANKQAALAKAGGVSKRH---------LANTKVIVATDL 508 Query 575 AARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 A+RGID V +V+ +P +++HR+GR GR R G + LV + + Sbjct 509 ASRGIDTLAVRHVVLYDVPHTTIDFIHRLGRAGRMGRRGRGVVLVGKDDRR 559 Score = 54.0 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 24/92 (26%) Query 24 LPTDIQAESIPLILGGG-------------------DVLMAAETGSGKTGAFSIPVIQIV 64 PT +Q +IP +LG + L+AAETGSGKT A+ +P+I + Sbjct 166 KPTPVQRLAIPALLGQRIGQQRETNHRRAAPESKREEFLLAAETGSGKTLAYLLPIINAL 225 Query 65 YETLKDQQEGKK-----GKTTIKTGASVLNKW 91 D + K + G + +++W Sbjct 226 KVAEADDVDAKAYNVRLEAEKERRGGTPVSEW 257 >sp|P35187|SGS1_YEAST ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SGS1 PE=1 SV=1 Length=1447 Score = 96.4 bits (238), Expect = 5e-19, Method: Composition-based stats. Identities = 49/327 (15%), Positives = 102/327 (31%), Gaps = 31/327 (9%) Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVV-------VPVNPKTDRLWERLGKSHIRTDDV 469 KL+ ++ V G D PD +P+ T E++ I ++ Sbjct 801 KLARIVVDEAHCVSNWGHDFRPDYKELKFFKREYPDIPMIALTATASEQVRMDIIHNLEL 860 Query 470 HAKDNTRPGANSPEMWSEAIKILKG---EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + N ++ E K K E K II+C +K C+ Sbjct 861 KEPVFLKQSFNRTNLYYEVNKKTKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQM 920 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G C H +P ER + ++ +++ + T GID V + Sbjct 921 QRNG---------IKCAYYHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRF 971 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 V + T+P + Y GR GR I+ + + + + ++ Sbjct 972 VYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMI----------QKDKN 1021 Query 647 GGCTIWYNEMQLLSEIEEHLNCTISQVEP-DIKVPVDEFDGKVTYGQ-KRAAGGGSYKGH 704 + L ++ + + + ++FD K+ + + Sbjct 1022 LDRENKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSKLCHKNCDNCRNSANVINE 1081 Query 705 VDILAPTVQELAALEKEAQTSFLHLGY 731 + +++ L + Q + + Y Sbjct 1082 ERDVTEPAKKIVKLVESIQNERVTIIY 1108 Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats. Identities = 15/56 (27%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query 10 MPEIAQAVEEMDWLLP--TDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 E+ + E+ + LP Q E++ L G DV + TG GK+ + +P + Sbjct 663 SDEVLYRLHEV-FKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVK 717 >sp|Q96UB6|SSH4_NEUCR Protein ssh4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=ssh4 PE=3 SV=2 Length=503 Score = 94.4 bits (233), Expect = 5e-19, Method: Composition-based stats. Identities = 35/154 (23%), Positives = 63/154 (41%), Gaps = 11/154 (7%) Query 133 HYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFD--NYGEE 185 +Y+E +D+ L +G +T L G K+ + G + +N+ F+ +YG + Sbjct 158 YYWEAKIYDKPENTLISIGMATKPYPLFRLPGFHKYSVAYLSNGTRRYNQPFNATSYGPQ 217 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKN-AELKFNFGE 244 D IG G + F++NGK L ++ +K+Q FP+ + NFG+ Sbjct 218 VVQGDVIGVGYRPRSGTIFFTRNGKKLE---DVVHGLKSQNFFPSIGANGPCIVHVNFGQ 274 Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVT 278 F F + G + G+ Q + Sbjct 275 AGFVFIEANVKKWGLAPMTGSLAPPPPYGSEQGS 308 >sp|Q9TS33|RYR3_RABIT Ryanodine receptor 3 OS=Oryctolagus cuniculus OX=9986 GN=RYR3 PE=1 SV=1 Length=4872 Score = 96.4 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 35/189 (19%), Positives = 66/189 (35%), Gaps = 9/189 (5%) Query 68 LKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKG 127 L D++ K + +++ + N A + S + + + Sbjct 1024 LLDERTKKSNRDSLREAVRTFVGYGYNIEPSDQELA--DPAVEKVSIDKIRFFRVERSYA 1081 Query 128 LMKGKHYYEVSCHDQGLCRVGWST--MQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEE 185 + GK Y+E G RVGW+ + ++LG G K G Sbjct 1082 VRSGKWYFEFEVVTGGDMRVGWARPGCRPDIELGPMTKPLCLKAAGASVGTKVVGILGVP 1141 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDL----GLAFEIPPHMKNQALFPACVLKNAEL-KF 240 + D +GC +++D + F+ NG+ L G + P C L +++ + Sbjct 1142 WQPGDVVGCMINLDDASMIFTLNGELLITNKGSELAFADYEIENGFVPICSLGLSQIGRM 1201 Query 241 NFGEEEFKF 249 N G + F Sbjct 1202 NLGTDASTF 1210 Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 32/154 (21%), Positives = 52/154 (34%), Gaps = 32/154 (21%) Query 132 KHYYEVSC--------HDQGLCRVGWSTMQA------------SLDLGTDKFGFGFGGTG 171 K Y+E+ + RVGW++ +G D + +GF G Sbjct 659 KWYFELIIDQVDPFLTAEPTHLRVGWASSSGYAPYPGGGEGWGGNGVGDDLYSYGFDG-- 716 Query 172 KKSHNKQFDNYGEEFTMH-----DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQA 226 + + H D + C LD+ + F NG+ + FE + Sbjct 717 LHLWSGRIPRAVASINQHLLKSDDVVSCCLDLGVPSISFRINGQPVQGMFENFN--TDGL 774 Query 227 LFPACVLK-NAELKFNFGEE--EFKFPPKDGFVA 257 FP +++F G EFKF P G+ Sbjct 775 FFPVMSFSAGVKVRFLMGGRHGEFKFLPPSGYAP 808 Score = 41.7 bits (96), Expect = 0.030, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 34/67 (51%), Gaps = 6/67 (9%) Query 192 IGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLK---NAELKFNFGEEEFK 248 IGC +D+ G + FS NGK+LG +++ P+ K FPA L+ + +F G+ + Sbjct 1411 IGCLVDLAMGMLSFSANGKELGTCYQVEPNTKV---FPAVFLQPTSTSLFQFELGKLKNA 1467 Query 249 FPPKDGF 255 P Sbjct 1468 MPLSAAI 1474 >sp|O34748|RECQ_BACSU ATP-dependent DNA helicase RecQ OS=Bacillus subtilis (strain 168) OX=224308 GN=recQ PE=1 SV=1 Length=591 Score = 94.8 bits (234), Expect = 7e-19, Method: Composition-based stats. Identities = 62/394 (16%), Positives = 139/394 (35%), Gaps = 66/394 (17%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYI-VKSQHSGNAQVTQTKFLPNAPKALIVE 293 + L FG E+F+ + +++A + G + Q L +++ Sbjct 6 QSLLAHYFGYEKFRSGQDEAIRLVTEARQNTACIMPTGGGKSICYQIPALMFEGTTIVIS 65 Query 294 PSRELAEQTLNNIKQFK---KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV-GTPGR 349 P L + ++ +++ YI++ + ++L+ L+ G + TP R Sbjct 66 PLISLMKDQVDALEEAGINAAYINSTQ-------SNQEIYERLNGLKEGAYKLFYITPER 118 Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT 409 L + L V + +DEA + G+ + ++++ Sbjct 119 LTSIEFIRILQGIDVPLVAIDEAHCISQWGHD------------FRPSYRNIEILF---- 162 Query 410 LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 ++L +K P + L + VH + + HI+ ++ Sbjct 163 ------RELHDK----PVIMALTA--TATPEVHDDICK-------------QLHIQKENT 197 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ 529 +R + E EY ++ ++ + I++ T+ + D + + Sbjct 198 VYTGFSRENLTFKVVKGENKDRFIDEY----VQNNRHEAGIVYTATRKEADRIYERL--- 250 Query 530 GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN 589 K +Q HG RK+ ERF +++ ++ T GID + +V++ Sbjct 251 ------KRNQVRAGRYHGGLADDVRKEQQERFLNDELQVMVATSAFGMGIDKSNIRFVLH 304 Query 590 VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 +P + ++Y GR GR + L + + Sbjct 305 AQIPKDMESYYQEAGRAGRDGLASECVLLFSPQD 338 >sp|Q8VID5|RECQ5_MOUSE ATP-dependent DNA helicase Q5 OS=Mus musculus OX=10090 GN=Recql5 PE=1 SV=1 Length=982 Score = 95.2 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 61/446 (14%), Positives = 128/446 (29%), Gaps = 71/446 (16%) Query 236 AELKFNFGEEEFKFPPKDGFVA--LSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVE 293 + LK FG + FK P ++ + A D ++ +G + Q L + ++V Sbjct 18 STLKKVFGFDSFKTPLQESATMAVVKGAEDVFVCMPTGAGKSLCYQLPALLASGITIVVS 77 Query 294 PSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN------GVDIVVGTP 347 P L + + K++ + ++ +++ +L + ++ TP Sbjct 78 P---LIALIQDQVDHLLAL----KVQVSSLNSKLSVQERKELLSDLERDKPRTKLLYITP 130 Query 348 ---------GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDG 398 L+ LVS L+ +LV+DEA + G+ + + + Sbjct 131 EMAASASFQPTLNSLVSRNLLS-----YLVVDEAHCVSQWGHDFRPDYLRLGALRSRLAH 185 Query 399 KRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER 458 + +AT + + P Sbjct 186 APCVALTATAT-PQVQEDVFAALHLKQPV------------------------------- 213 Query 459 LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKID 518 + + + P+++ +A I++CRT+ Sbjct 214 -ASFKTPCFRANLFYDVQFKELIPDVYGNLRDFCLKALGQKAENGSSSGCGIVYCRTREA 272 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 C+ L +G + H K +R Q + + V ++ T G Sbjct 273 CEQLAIELSSRG---------VNAKAYHAGLKASDRTQVQNEWMEEKVPVIVATISFGMG 323 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 +D V +V + + Y GR GR + + + Sbjct 324 VDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAKL 383 Query 639 YNTRLKEDGGCTIWYNEMQLLSEIEE 664 R + L++ EE Sbjct 384 QEKRGNKPSDKATLLAFDALVTFCEE 409 Score = 35.1 bits (79), Expect = 2.8, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (3%) Query 26 TDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 T +Q + ++ G DV + TG+GK+ + +P + Sbjct 31 TPLQESATMAVVKGAEDVFVCMPTGAGKSLCYQLPAL 67 >sp|P30015|LHR_ECOLI Probable ATP-dependent helicase Lhr OS=Escherichia coli (strain K12) OX=83333 GN=lhr PE=3 SV=2 Length=1538 Score = 93.7 bits (231), Expect = 3e-18, Method: Composition-based stats. Identities = 61/378 (16%), Positives = 118/378 (31%), Gaps = 57/378 (15%) Query 265 YIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDN--------- 315 Y + + T+ + L + P + L N++ K I + Sbjct 64 YALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQIPLKGIADERRRRGETE 123 Query 316 PKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN-LSQVRFLVLDEADG 374 LR + G A+++ + N DI++ TP L ++++ L V +++DE Sbjct 124 VNLRVGIRTGDTPAQERSKLTRNPPDILITTPESLYLMLTSRARETLRGVETVIIDEVHA 183 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 + + ++ + + + SAT+ S + P V Sbjct 184 VAGSKRGAHLALSLERLDALLHTSAQRIGL--SATVRSAS-DVAAFLGGDRPVTV----- 235 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 VNP R + + D + + G +S +I Sbjct 236 -------------VNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIE 282 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ--------------- 539 + + H+ I+F ++ + L + ++ Sbjct 283 TGILDEVLRHR--STIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVDAAHFESTSGAT 340 Query 540 ---------FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 F HG +R + K G++R ++ T GID+ V VI V Sbjct 341 SNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVDLVIQV 400 Query 591 TLPDEKQNYVHRIGRVGR 608 P + + RIGR G Sbjct 401 ATPLSVASGLQRIGRAGH 418 Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 39/96 (41%), Gaps = 4/96 (4%) Query 22 WLLPTDIQAESIPLILGGGDVLMAAETGSGKT-GAFSIPVIQIVYETLKDQQEGKKGKTT 80 + PT +Q ++ + L+ A TGSGKT AF + ++ E +D +E K KT+ Sbjct 27 FKQPTAVQPQTWHVAARSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTS 86 Query 81 IKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREV 116 S + D I G+ + R Sbjct 87 RILYISPIKALGT---DVQRNLQIPLKGIADERRRR 119 >sp|Q14191|WRN_HUMAN Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2 Length=1432 Score = 92.9 bits (229), Expect = 6e-18, Method: Composition-based stats. Identities = 75/478 (16%), Positives = 150/478 (31%), Gaps = 89/478 (19%) Query 234 KNAELKFNFGEEEFKFPPKDGFVA-LSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIV 292 + LK FG FK + L + D V + G + Q + L++ Sbjct 536 QVTCLKMYFGHSSFKPVQWKVIHSVLEERRDNVAVMATGYGKSLCFQYPPVYVGKIGLVI 595 Query 293 EPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTP---- 347 P L + + Q K + N +G + + L+ ++ G IV TP Sbjct 596 SP---LISLMEDQVLQLK--MSNI---PACFLGSAQSENVLTDIKLGKYRIVYVTPEYCS 647 Query 348 ---GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 G L L + + L V DEA + G+ ++ + + + ++ Sbjct 648 GNMGLLQQLEADIGITLIAV-----DEAHCISEWGH--DFRDSFRKLGSLKTALPMVPIV 700 Query 405 VCSATLHSFDVKKLSE-KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 +AT S + + + P + ++ + V KT + + L Sbjct 701 ALTATASSSIREDIVRCLNLRNPQITCTGFDRP------NLYLEVRRKTGNILQDLQPFL 754 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 ++T + II+C ++ + Sbjct 755 VKTSSHWEFE---------------------------------GPTIIYCPSRKMTQQVT 781 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + SC H RK RF + +++ +I T GI+ Sbjct 782 GELRKL---------NLSCGTYHAGMSFSTRKDIHHRFVRDEIQCVIATIAFGMGINKAD 832 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRL 643 + VI+ P + ++Y IGR GR L A + H+ L Sbjct 833 IRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHL------------L 880 Query 644 KEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSY 701 E ++++++++E++L+ + ++ + F+ K G Sbjct 881 TEIRNEKFRLYKLKMMAKMEKYLHSS----RCRRQIILSHFEDKQVQKASLGIMGTEK 934 >sp|P50830|YPRA_BACSU Uncharacterized ATP-dependent helicase YprA OS=Bacillus subtilis (strain 168) OX=224308 GN=yprA PE=1 SV=1 Length=749 Score = 91.7 bits (226), Expect = 8e-18, Method: Composition-based stats. Identities = 68/409 (17%), Positives = 141/409 (34%), Gaps = 59/409 (14%) Query 254 GFVALSKAPDGYIVKSQHSGNAQ-----VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQ 308 F + K V SG V Q+ +AL + P++ LA+ + + + Sbjct 62 AFQYVQKGESIVTVTPTASGKTLCYNLPVLQSIAQDETNRALYLFPTKALAQDQKSELNE 121 Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN----LSQV 364 + ++ G + + V + G IV+ P L + + Sbjct 122 IIDEM-GIDIKSFTYDGDTSPAIRQKVRKAG-HIVITNPDMLHSAILPHHTKWVSLFENL 179 Query 365 RFLVLDEADG---LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 +++V+DE + ++ I R+ SD + SAT+ + K+L E+ Sbjct 180 KYIVIDELHTYRGVFGSHVANVIRRLKRICRFYGSDPVFICT---SATI--ANPKELGEQ 234 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 + P L ++ P H V P + K + + Sbjct 235 LTGKPMR--LVDDNGAPSGRKHFVFYNPP------------------IVNKPLNIRRSAT 274 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 E+ A + LK + Q I+F R+++ + + + + K+ S Sbjct 275 AEVNELAKEFLKNKV-----------QTIVFARSRVRVEIILSHIQEL---VKKEIGTKS 320 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH 601 G P ER++ ++GD+ ++ T+ G+DI + + P + Sbjct 321 IRGYRGGYLPKERREIERGLREGDILGVVSTNALELGVDIGQLQVCVMTGYPGSVASAWQ 380 Query 602 RIGRVGRAERMGLAISLV----ATEKEKVWYHVCSSRGKGCYNTRLKED 646 + GR GR R G ++ ++ + + H + + R+ + Sbjct 381 QAGRAGR--RHGESLIIMVANSTPIDQYIVRHPEYFFNRSPESARINPE 427 Score = 37.8 bits (86), Expect = 0.46, Method: Composition-based stats. Identities = 12/58 (21%), Positives = 25/58 (43%), Gaps = 0/58 (0%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 + I A+ + Q + + G ++ T SGKT +++PV+Q + + Sbjct 39 IDERIKAALSKRGIDELYTHQYSAFQYVQKGESIVTVTPTASGKTLCYNLPVLQSIAQ 96 >sp|Q9FT74|RQL1_ARATH ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana OX=3702 GN=RECQL1 PE=2 SV=1 Length=606 Score = 90.6 bits (223), Expect = 1e-17, Method: Composition-based stats. Identities = 66/393 (17%), Positives = 132/393 (34%), Gaps = 69/393 (18%) Query 242 FGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL-AE 300 FG + F+ A + D +++ G + Q A +++ P L + Sbjct 202 FGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQLPATLKAGVTIVISPLLSLIQD 261 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVGTPGRLDDLVSTGKL 359 Q + +F I L AA Q +N ++ TP + ++ Sbjct 262 QIVALNLKFG--IPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVTP----EKIAGSSS 315 Query 360 NLSQVRFL---------VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL 410 L +R L V+DEA + G+ + ++ + + R+ V+ +AT Sbjct 316 FLETLRCLDRKGLLAGFVVDEAHCVSQWGH--DFRPDYRELGCLKQNFPRVPVMALTAT- 372 Query 411 HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVH 470 E D + + +P P ++R+ + Sbjct 373 ---------------------ATESVCQDVLKSLRIPRAPVLKMSFDRINLKY------- 404 Query 471 AKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG 530 + E + ++L+ + K I++C +K +C ++ ++ ++ Sbjct 405 -----EVIVKTKEPLKQLQELLRDRF--------KDQSGIVYCLSKSECVDVAKFLNEK- 450 Query 531 GGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV 590 + V H +R +++ G+VR + T GID V +VI+ Sbjct 451 -------CKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHN 503 Query 591 TLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 TL ++Y GR GR I L + Sbjct 504 TLSKAVESYYQESGRAGRDGLQAQCICLYQKKD 536 >sp|A2R345|DCL21_ASPNC Dicer-like protein 2-1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=dcl2-1 PE=3 SV=2 Length=1387 Score = 91.3 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 59/343 (17%), Positives = 108/343 (31%), Gaps = 32/343 (9%) Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 I+ TP LDDL ++ ++ LV A L +I ++ + DG+ Sbjct 228 QILF-TPVLLDDL----QVGSKTLKALV--SAWTSLRLEDDPYIKKLR----KSPLDGRA 276 Query 401 LQVIVCS-ATLHSFDVKKLSEKIMH-FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL-WE 457 LQ ++ S T + +K+ + + +H F + + + ++ + D + W Sbjct 277 LQKVLESGKTYCNDQLKRFATRSLHIFEELGEWAADYFIHASIEQLKARAGNSADTMGWT 336 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 K+++ +S + K +IF + + Sbjct 337 DEEKAYLLDIVSKLPIPNIDLTHSDPDRIPISSKFRSLLEFLDTKGEPNFSGLIFAKQRA 396 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCL---HGD---------RKPHERKQNLERFKKGD 565 +E+ H+F C G ++ L F+ G Sbjct 397 TVSVMEKLL----SIHPVTKHRFRCASFVGWSGGGSKDVLGELLDARMQRDTLSEFRTGQ 452 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 +I TDV GIDI V+ P +++V R GR R + AI ++ Sbjct 453 KNLIIATDVLEEGIDISACSVVVCFDKPPNLKSFVQRRGR-ARHRQSTYAIMFATDDESS 511 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 E W E + E+ E L Sbjct 512 ALSKWEDLEQAMIEAYEDDERRLREAWALEA-INEEVVERLEV 553 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 44/324 (14%), Positives = 104/324 (32%), Gaps = 27/324 (8%) Query 275 AQVTQTKFLPNAPKALI--VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR-- 330 A + K L + P LI + P+ L Q + + P +R + Sbjct 49 ALLRIIKELESNPHKLIWFLTPTVALCLQQFKFLSD-----NIPAVRARTLTSLDKVELW 103 Query 331 -DQL--SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRM 387 +Q + + +VV T L D +S G + ++Q+ ++ DEA + + ++ I + Sbjct 104 TEQPVWDAILKEMQVVVSTHAVLADAMSHGFVKITQLGLMIFDEAHHCMRRHPANKIMQD 163 Query 388 HNQIPQVTSDGKRLQVIV-CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 + + I+ +A+ ++ KI V + + H Sbjct 164 FYHPALERHGAEAVPKILGLTASPVVRSNRQELLKIESNLDAVCKTPRTHRSELMTHTHR 223 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 P + L + + + A + + K + Sbjct 224 PHLQQILFTPVLLDDLQVGSKTLKALVSAWTSLRLEDDPYIKKLRKSPLDGRALQKVLES 283 Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP-HERKQNLER---FK 562 + +C D L+++ + ++ G + +H + R N + Sbjct 284 GKT--YCN-----DQLKRFATRSLHIFEELGEWAADYFIHASIEQLKARAGNSADTMGWT 336 Query 563 KGDVRFLICTDVAARGIDIHGVPY 586 + +L+ D+ ++ + I + Sbjct 337 DEEKAYLL--DIVSK-LPIPNIDL 357 >sp|O09053|WRN_MOUSE Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3 Length=1401 Score = 91.0 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 68/432 (16%), Positives = 132/432 (31%), Gaps = 65/432 (15%) Query 238 LKFNFGEEEFKFPPKDGFVA-LSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSR 296 LK FG FK + L + D +V + G + Q + +++ P Sbjct 504 LKTYFGHSSFKPVQWKVIHSVLEERRDNVVVMATGYGKSLCFQYPPVYTGKIGIVISP-- 561 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP----GRLDD 352 L + + Q + + L+ + V ++ TP G L D Sbjct 562 -LISLMEDQVLQL----ELSNVPACLLGSAQSKNILGDVKLGKYRVIYITPEFCSGNL-D 615 Query 353 LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS 412 L+ ++ + + +DEA + G+ + + + + VI SAT S Sbjct 616 LLQQLDSSIG-ITLIAVDEAHCISEWGH--DFRSSFRMLGSLKTALPLVPVIALSATASS 672 Query 413 FDVKKLSE-KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 + + + P + ++ + V KT + + L +R Sbjct 673 SIREDIISCLNLKDPQITCTGFDRP------NLYLEVGRKTGNILQDLKPFLVRKASSAW 726 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 + II+C ++ + + + Sbjct 727 EFE--------------------------------GPTIIYCPSRKMTEQVTAELGKL-- 752 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 +C H K ERK RF + +++ ++ T GI+ + VI+ Sbjct 753 -------NLACRTYHAGMKISERKDVHHRFLRDEIQCVVATVAFGMGINKADIRKVIHYG 805 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH-VCSSRGKGCYNTRLKEDGGCT 650 P E ++Y IGR GR L A + + + +LK Sbjct 806 APKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNLLIEIHDEKFRLYKLKMMVKME 865 Query 651 IWYNEMQLLSEI 662 + + Q I Sbjct 866 KYLHSSQCRRRI 877 >sp|Q9FT72|RQL3_ARATH ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1 Length=713 Score = 89.0 bits (219), Expect = 5e-17, Method: Composition-based stats. Identities = 61/407 (15%), Positives = 129/407 (32%), Gaps = 69/407 (17%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEP- 294 L+++FG +F+ + A+ D + + G + Q L L+V P Sbjct 26 KLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPL 85 Query 295 -----SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG- 348 ++ +A + ++ ++ + + + + +L + ++ T G Sbjct 86 IALMENQVMALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPE-LIATKGF 144 Query 349 --RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 +L L S G LNL + +DEA + S G+ + Q+ + + V+ Sbjct 145 MLKLRKLHSRGLLNL-----IAIDEAHCISSWGH--DFRPSYRQLSTLRDSLADVPVLAL 197 Query 407 SATL-HSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 +AT + + P + + + V Sbjct 198 TATAAPKVQKDVIDSLNLRNPL---VLKSSFNRPNIFYEV-------------------- 234 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 R +++ +LK + AII+C + CD+L + Sbjct 235 ----------RYKDLLDNAYTDLGNLLKSCGNIC---------AIIYCLERTTCDDLSVH 275 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 G S H R L+ + + ++ T GID V Sbjct 276 LSSIG---------ISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVR 326 Query 586 YVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 V + +P +++ GR GR + ++ + K ++ Sbjct 327 MVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLR 373 Score = 36.3 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 17/35 (49%), Gaps = 0/35 (0%) Query 29 QAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQI 63 Q E+I ++ G D TG GK+ + IP + Sbjct 41 QLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAK 75 >sp|P0C5H7|DCL2_EMENI Dicer-like protein 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=dcl2 PE=3 SV=1 Length=1429 Score = 89.4 bits (220), Expect = 6e-17, Method: Composition-based stats. Identities = 80/486 (16%), Positives = 144/486 (30%), Gaps = 114/486 (23%) Query 261 APDGYIVKSQHSGNAQVTQTKF---LPNAPKALI--VEPSRELAEQTLNNIKQFKKYIDN 315 + +V SG Q+ + L N+ LI + P+ L Q I Q Sbjct 27 KGNIIVVMGTGSGKTQIALLRIIHELENSDGKLIWFLAPTVPLCLQQHRVISQH-----I 81 Query 316 PKLRELLIIGGVAAR---DQL--SVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLD 370 P ++ ++G +Q + G+ ++V TP L D ++ G + +S++ L+ D Sbjct 82 PAVKSRTLLGSDKVELWTEQAVWDAVLEGLQVIVSTPAVLHDAMTHGFVRISRLGLLIFD 141 Query 371 EADGLLSQGYSDFI-----------------NRMHNQIPQVTSDGKRLQVI---VCSA-T 409 EA + + ++ I R+ S + LQ I + S T Sbjct 142 EAHHCIRKHPTNMIMRNFYHPALQEYGPGAVPRILGLTASAGSSREGLQTIEMNLNSVCT 201 Query 410 LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWER----------- 458 ++L E H P + + + + +L ER Sbjct 202 TPQAHRQELLE-YTHMPELRRVLYTPLMKEN---ASLWEGSTLQKLLERDNTYCSGQMKT 257 Query 459 --LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK-------GEYAVRAIKEHKMDQA 509 HI + A+ E+ S A K EY V + + + Sbjct 258 FVCKAVHIFQELGIWAAEYFIRASVEELLSHAYVHSKIDLDYDEREYLVNILSKSPVPDI 317 Query 510 ---------------------------------IIFCRTKIDCDNLEQYFIQQGGGPDKK 536 +IF + + D Sbjct 318 DVHSTDPKDFPVSPKFEALISFLMSTEDINFSGLIFVEQRAAVTVMSYLLSTHPSTRD-- 375 Query 537 GHQFSCVCLHGDRKPHERKQNL-------------ERFKKGDVRFLICTDVAARGIDIHG 583 +F G RK L + F+ G ++ TDV GID+ Sbjct 376 --RFRTGSFIGMSNSTNRKTMLGDLLSAKMQPDTLDDFRYGRKNLIVATDVLKEGIDVSA 433 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK---EKVWYHVCSSRGKGCYN 640 VI +P ++++ R GR R + ++ L + W + C Sbjct 434 CSVVICYNIPKGFESFIQRRGR-ARRQNSTYSMMLSTEDDGSTLDKWQKFEKIMEEACLE 492 Query 641 TRLKED 646 R + + Sbjct 493 DRRRTE 498 >sp|O48534|DEXHD_ARATH DExH-box ATP-dependent RNA helicase DExH13 OS=Arabidopsis thaliana OX=3702 GN=BRR2B PE=2 SV=1 Length=2172 Score = 89.8 bits (221), Expect = 6e-17, Method: Composition-based stats. Identities = 60/391 (15%), Positives = 132/391 (34%), Gaps = 55/391 (14%) Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN- 360 + + + + + + G + Q I+V TP + D+++ + Sbjct 573 VAEVVDSLSQRLKDFGVTVKELSGDQSLTGQEI---KETQIIVTTPEK-WDIITRKSGDR 628 Query 361 --LSQVRFLVLDEADGLLSQGYSDFINRMH-NQIPQVTSDGKRLQVIVCSATLHS-FDVK 416 VR L++DE LL + + + Q+ S + ++++ SATL + DV Sbjct 629 TYTQLVRLLIIDEIH-LLDDNRGPVLESIVARTLRQIESTKEHIRLVGLSATLPNCDDVA 687 Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 + ++ + VP ++ + V R + + V K Sbjct 688 SFLRVDLKNGLFIFDRSYRPVPLGQQYIGINVKKPLRRFQLMNDICYQKVVAVAGKHQVL 747 Query 477 PGANSPEMWSEAIKILKG-----EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 +S + ++ + ++ + R +KE + I+ C L Sbjct 748 IFVHSRKETAKTARAIRDTAMANDTLSRFLKEDSQSREILKC--------LAGLLKN--- 796 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN-- 589 K+ + H +R+ +F+ G+++ LI T A G+++ +I Sbjct 797 NDLKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLISTATLAWGVNLPAHTVIIKGT 856 Query 590 --VTLPD------EKQNYVHRIGRVGR--AERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 + + IGR GR ++ G I + K + + + + + Sbjct 857 QVYNPERGEWMELSPLDVMQMIGRAGRPQYDQQGEGIIITGYSKLQYYLRLMNEQ----- 911 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 E Q +S++ + LN I Sbjct 912 ------------LPIESQFISKLADQLNAEI 930 Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats. Identities = 57/471 (12%), Positives = 141/471 (30%), Gaps = 91/471 (19%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQH 271 L + P + + P L+N + + + + P + + +V + Sbjct 1316 LPEKYPPPTELLDLQPLPVMALRNPSYETLYQDFKHFNPVQTQVFTVLYNTSDNVVVAAP 1375 Query 272 SGNAQV---------TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELL 322 +G+ + + +A + + + P +A++ + ++ K+ LR + Sbjct 1376 TGSGKTICAEFAILRNHLEGPDSAMRVVYIAPLEAIAKEQFRDWEK--KFGKGLGLRVVE 1433 Query 323 IIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST--GKLNLSQVRFLVLDEADGLLSQGY 380 + G L +LE G I++ TP + D L + + QV ++DE + QG Sbjct 1434 LTGETLL--DLKLLEKG-QIIISTPEKWDALSRRWKQRKYIQQVSLFIVDELHLIGGQG- 1489 Query 381 SDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDT 440 + + +++ + +S ++ + V L + Sbjct 1490 GQVLEVIVSRM------------------------RYISSQVGNKIRIVALSTSLANAKD 1525 Query 441 VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRA 500 + + + + + + G + + + K Y Sbjct 1526 LGEWIGASSCGVFNFPPNVRPVPL--------EIHIHGVDILSFEARMQAMTKPTYTAIV 1577 Query 501 IKEHKMDQAIIFCRTKIDC--------------------------DNLEQYFIQQGGGPD 534 AI+F T+ + LE + IQ Sbjct 1578 QHAKNKKPAIVFVPTRKHVRLTAVDLIAYSHMDNMKSPDFLLGNLEELEPFLIQICEETL 1637 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI------ 588 K+ + LH +++ + F+ G ++ + + G + V+ Sbjct 1638 KETLRHGIGYLHEGLSNLDQEIVTQLFEAGRIQVCVMSSSLCWGTPLKAHLVVVMGTHFY 1697 Query 589 ------NVTLPDEKQNYVHRIGRVGR--AERMGLAISLVATEKEKVWYHVC 631 + P N + +GR R + G + +++ + Sbjct 1698 DGRENSHSDYP--ISNLLQMMGRGSRPLLDDAGKCVIFCHAPRKEYYKKFL 1746 >sp|Q7SDF3|MPH1_NEUCR ATP-dependent DNA helicase mph1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mph1 PE=3 SV=1 Length=1168 Score = 89.0 bits (219), Expect = 8e-17, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 110/334 (33%), Gaps = 39/334 (12%) Query 406 CS--ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 S AT S K+++F + + E+ GK Sbjct 419 FSVIATFAILQSLAHSIKLLNF-------------HGIKPFYNNLAEFRTTEEEKGGKGS 465 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKIL---KGEYAVRAIKEHKMD-------QAIIFC 513 V +N + + E W + L K EY + H MD +AI+F Sbjct 466 KLKRQVLEDENFQKMMDMIEGWMKIDGFLGHPKLEYLCETLVNHFMDAGEGSNTRAIVFS 525 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 + + + + +Q + K ++ + +E+FK G L+ T Sbjct 526 EYRDSAEEIVRILNKQPLIKATVFVGQADSKRSEGMKQKQQIETIEKFKNGAHNVLVATS 585 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + G+DI V ++ + R+GR GR R G + L+ KE+ + Sbjct 586 IGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGRK-RAGNIVLLLMKGKEE--DKFNEA 642 Query 634 RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQK 693 + R+ +G + ++ L S I + P+++ V E + + + Sbjct 643 KDNYATMQRMICEGSRFTFRHD--LSSRIVPR------DIRPEVEKKVVEIPLENS---Q 691 Query 694 RAAGGGSYKGHVDILAPTVQELAALEKEAQTSFL 727 + + ++ + +T F+ Sbjct 692 NPELPEPKRSAARMRTKPAKKKFNMPDGVETGFI 725 Score = 43.2 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 21/89 (24%), Positives = 36/89 (40%), Gaps = 8/89 (9%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVA--ARDQLSVLENGVDIVVG 345 KA+ V P++ LA Q + P+ + L+ G R+ + + Sbjct 200 KAVFVAPTKPLASQQVQACLSIA---GIPRSQATLLTGETPPVLREDEWATKR---LFFM 253 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 TP L + +S G + + LV+DEA Sbjct 254 TPQTLMNDLSKGYADPKSIVLLVIDEAHR 282 >sp|Q06683|IRC3_YEAST Putative ATP-dependent helicase IRC3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IRC3 PE=1 SV=1 Length=689 Score = 88.3 bits (217), Expect = 9e-17, Method: Composition-based stats. Identities = 58/326 (18%), Positives = 115/326 (35%), Gaps = 40/326 (12%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGV 340 K K+LI+ RELA Q +K+ P L+ + +G + S Sbjct 82 KERQGNFKSLILVHRRELALQATATLKKI-----FPDLKVHIEMGKYDCDIEDS------ 130 Query 341 DIVVGTPGRLDDLVST-GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 D++V + + L+ K + + V +++DEA ++ Y + + T++ K Sbjct 131 DVIVAS---VQTLIRRLHKYDTNSVNLIIIDEAHHSVANSY----RSILDHFKASTAETK 183 Query 400 RLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 VI SAT D + LS + + + ++ + Sbjct 184 IP-VIGFSATFERADKRALSM----------VMDKIVYHRGILEMIDDKWLCEAKFTSVK 232 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 ++ + A D +S E +++ Y +E + ++F K Sbjct 233 IEADLSDVKSTADDFQLAPLSSLMNTKEINEVILKTYL-HKKQEKSLKSTLLFGVDKAHV 291 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 +L + F G D + D K ER +++FK G+ L+ + G Sbjct 292 QSLHKLFKDNGINTD---------YVTSDTKQIERDNIIQKFKNGETEVLMNCGIFTEGT 342 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGR 605 D+ + ++ + + IGR Sbjct 343 DMPNIDCILLCRPTKSRSLLIQMIGR 368 >sp|Q9UBL3|ASH2L_HUMAN Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Homo sapiens OX=9606 GN=ASH2L PE=1 SV=1 Length=628 Score = 87.9 bits (216), Expect = 1e-16, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 85/230 (37%), Gaps = 58/230 (25%) Query 93 MNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGL---CRVGW 149 + +DR I D L K + RA+ G+ KG Y+E++ + R+GW Sbjct 383 LALHDRAPQLKISDDRLTVVGE--KGYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGW 440 Query 150 STMQASLD--LGTDKFGFGFGGT-GKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH---- 202 S +L LG DKF + + G K H +Y + D +G Y+++ + Sbjct 441 SQPLGNLQAPLGYDKFSYSWRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINLPEDTETAK 500 Query 203 ----------------------------------------VKFSKNGKDLGLAFEIPPHM 222 + F KNG + G+A+ + Sbjct 501 SLPDTYKDKALIKFKSYLYFEEKDFVDKAEKSLKQTPHSEIIFYKNGVNQGVAY---KDI 557 Query 223 KNQALFPACVL-KNAELKFNFGEEEFKFPPKDG-FVALSKAPDGYIVKSQ 270 FPA L K+ + NFG FK+PPKD + +S G +V+ Sbjct 558 FEGVYFPAISLYKSCTVSINFG-PCFKYPPKDLTYRPMSDMGWGAVVEHT 606 >sp|Q91X20|ASH2L_MOUSE Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Mus musculus OX=10090 GN=Ash2l PE=1 SV=1 Length=623 Score = 87.5 bits (215), Expect = 1e-16, Method: Composition-based stats. Identities = 53/230 (23%), Positives = 85/230 (37%), Gaps = 58/230 (25%) Query 93 MNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGL---CRVGW 149 + +DR I D L K + RA+ G+ KG Y+E++ + R+GW Sbjct 378 LALHDRAPQLKISDDRLTVVGE--KGYSMVRASHGVRKGAWYFEITVDEMPPDTAARLGW 435 Query 150 STMQASLD--LGTDKFGFGFGGT-GKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGH---- 202 S +L LG DKF + + G K H +Y + D +G Y+++ + Sbjct 436 SQPLGNLQAPLGYDKFSYSWRSKKGTKFHQSIGKHYSSGYGQGDVLGFYINLPEDTETAK 495 Query 203 ----------------------------------------VKFSKNGKDLGLAFEIPPHM 222 + F KNG + G+A+ + Sbjct 496 SLPDTYKDKALIKFKSYLYFEEKDFVDKAEKSLKQTPHSEIIFYKNGVNQGVAYR---DI 552 Query 223 KNQALFPACVL-KNAELKFNFGEEEFKFPPKDG-FVALSKAPDGYIVKSQ 270 FPA L K+ + NFG FK+PPKD + +S G +V+ Sbjct 553 FEGVYFPAISLYKSCTVSINFG-PSFKYPPKDLTYHPMSDMGWGAVVEHT 601 >sp|P0CR12|MRH4_CRYNJ ATP-dependent RNA helicase MRH4, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=MRH4 PE=3 SV=1 Length=551 Score = 86.3 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 70/381 (18%), Positives = 124/381 (33%), Gaps = 98/381 (26%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL----LIIGGVAARDQLSVLENGVDI 342 P+++I+ P+ EL Q+ K N KL + GGV + VD+ Sbjct 139 PRSIILSPTHELTRQSTQFAKILTH---NTKLSVHGMSSTVSGGVGEK------RGSVDV 189 Query 343 VVGTPGRL-------------------------DDLVSTGKLNLSQVRFLVLDEADGLLS 377 ++GT G L D G + +V ++V+DEAD LL Sbjct 190 LLGTVGSLRRMFGMTRSEEEQEKEDYIRGKRIWQDEQEKGMVEGDKVEWVVIDEADVLLG 249 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 + + + +Q+ K+ +I+C+ATL P ++L + Sbjct 250 REFYLDTISVLSQV-------KQANLILCTATLP--------------PFLINLLTTNPF 288 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + ++P +L +L IR K + + Sbjct 289 FTKKEPFIHLLSPGLHKLPPKLLTRFIRPSTTGNKH-----GDVAHQVRLTLAEDAKAAK 343 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYF-----------------IQQGGGPDKKGHQF 540 + + + +IFC + + + ++ G Q Sbjct 344 AEGREGEEPSKIVIFCNSDKQVEQVSGILGTKKIDCLAWTGAGEERLRGRNGSLNDFLQR 403 Query 541 SCVCLHG------DRKPHERKQNLERFKKGDV---------RFLICTDVAARGIDI-HGV 584 + H +P E K + K G R L+ T + +RG+D V Sbjct 404 PHLPGHEPPAPLPSLEPRETKPIFQD-KNGTTPNVSQVTRRRVLVTTSLLSRGLDFHPSV 462 Query 585 PYVINVTLPDEKQNYVHRIGR 605 V V P + ++VHR GR Sbjct 463 SSVFLVQPPRDVLDFVHRAGR 483 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 21/161 (13%) Query 2 AAFSEMGVMPEIAQAVEEM--DWLLPTDI---------QAESIPLILGGGDVLMAAETGS 50 F + G+ + ++++ + + T I Q + +G VL+ AETGS Sbjct 43 RTFDDFGLEEGLVKSLKGLYGEDGKTTPIETLSFHHFTQPDIASAPIGSQRVLLGAETGS 102 Query 51 GKTGAFSIPVIQIVYETLKDQQEGKKGKTTI---KTGASVLNKWQMNPYDRGSAFAIGSD 107 GKT ++ IP ++ LK G ++ ++P + + Sbjct 103 GKTVSYLIP----LFHHLKRTDPGPSVTSSFFADSENTLHPRSIILSPTHELTRQSTQFA 158 Query 108 GLCCQSREVKEWHGCRATK--GLMKGKHYYEVSCHDQGLCR 146 + + ++ HG +T G+ + + +V G R Sbjct 159 KILTHNTKL-SVHGMSSTVSGGVGEKRGSVDVLLGTVGSLR 198 >sp|P0CR13|MRH4_CRYNB ATP-dependent RNA helicase MRH4, mitochondrial OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=MRH4 PE=3 SV=1 Length=551 Score = 86.3 bits (212), Expect = 3e-16, Method: Composition-based stats. Identities = 70/381 (18%), Positives = 124/381 (33%), Gaps = 98/381 (26%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL----LIIGGVAARDQLSVLENGVDI 342 P+++I+ P+ EL Q+ K N KL + GGV + VD+ Sbjct 139 PRSIILSPTHELTRQSTQFAKILTH---NTKLSVHGMSSTVSGGVGEK------RGSVDV 189 Query 343 VVGTPGRL-------------------------DDLVSTGKLNLSQVRFLVLDEADGLLS 377 ++GT G L D G + +V ++V+DEAD LL Sbjct 190 LLGTVGSLRRMFGMTRSEEEQEKEDYIRGKRIWQDEQEKGMVEGDKVEWVVIDEADVLLG 249 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 + + + +Q+ K+ +I+C+ATL P ++L + Sbjct 250 REFYLDTISVLSQV-------KQANLILCTATLP--------------PFLINLLTTNPF 288 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + ++P +L +L IR K + + Sbjct 289 FTKKEPFIHLLSPGLHKLPPKLLTRFIRPSTTGNKH-----GDVAHQVRLTLAEDAKAAK 343 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYF-----------------IQQGGGPDKKGHQF 540 + + + +IFC + + + ++ G Q Sbjct 344 AEGREGEEPSKIVIFCNSDKQVEQVSGILGTKKIDCLAWTGAGEERLRGRNGSLNDFLQR 403 Query 541 SCVCLHG------DRKPHERKQNLERFKKGDV---------RFLICTDVAARGIDI-HGV 584 + H +P E K + K G R L+ T + +RG+D V Sbjct 404 PHLPGHEPPAPLPSLEPRETKPIFQD-KNGTTPNVSQVTRRRVLVTTSLLSRGLDFHPSV 462 Query 585 PYVINVTLPDEKQNYVHRIGR 605 V V P + ++VHR GR Sbjct 463 SSVFLVQPPRDVLDFVHRAGR 483 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 21/161 (13%) Query 2 AAFSEMGVMPEIAQAVEEM--DWLLPTDI---------QAESIPLILGGGDVLMAAETGS 50 F + G+ + ++++ + + T I Q + +G VL+ AETGS Sbjct 43 RTFDDFGLEEGLVKSLKGLYGEDGKTTPIETLSFHHFTQPDIASAPIGSQRVLLGAETGS 102 Query 51 GKTGAFSIPVIQIVYETLKDQQEGKKGKTTI---KTGASVLNKWQMNPYDRGSAFAIGSD 107 GKT ++ IP ++ LK G ++ ++P + + Sbjct 103 GKTVSYLIP----LFHHLKRTDPGPSVTSSFFADSENTLHPRSIILSPTHELTRQSTQFA 158 Query 108 GLCCQSREVKEWHGCRATK--GLMKGKHYYEVSCHDQGLCR 146 + + ++ HG +T G+ + + +V G R Sbjct 159 KILTHNTKL-SVHGMSSTVSGGVGEKRGSVDVLLGTVGSLR 198 >sp|D4ACP5|RECQ5_RAT ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 GN=Recql5 PE=1 SV=1 Length=973 Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 47/155 (30%), Gaps = 9/155 (6%) Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 I++CRT+ C+ L +G + H K ER Q + + V + Sbjct 264 IVYCRTREACEQLAIELSSRG---------VNAKAYHAGLKASERTQVQNEWMEEKVPVI 314 Query 570 ICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + T G+D V +V + + Y GR GR + + Sbjct 315 VATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSF 374 Query 630 VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 + R + L++ EE Sbjct 375 LIRKELAKLQEKRGNKPSDKATLLAFDALVTFCEE 409 Score = 39.7 bits (91), Expect = 0.10, Method: Composition-based stats. Identities = 11/37 (30%), Positives = 21/37 (57%), Gaps = 1/37 (3%) Query 26 TDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVI 61 T +Q +I ++ G DV + TG+GK+ + +P + Sbjct 31 TPLQESAIMAVVKGDKDVFVCMPTGAGKSLCYQLPAV 67 >sp|P18160|SPLA_DICDI Dual specificity protein kinase splA OS=Dictyostelium discoideum OX=44689 GN=splA PE=1 SV=3 Length=2410 Score = 86.7 bits (213), Expect = 4e-16, Method: Composition-based stats. Identities = 34/149 (23%), Positives = 56/149 (38%), Gaps = 18/149 (12%) Query 121 GCRATKGLMKGKHYYEVSC--HDQGLCRVGWSTMQASLD--LGTDKFGFGFGGTGKKSHN 176 G RAT+ +G Y+EV D+G +G + ++ +G +G+ + Sbjct 1074 GVRATQPFGEGFCYFEVIIDQLDKGQLSIGLANLEYPTFYHVGWMPRSYGYHNDDGRKFR 1133 Query 177 -------KQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229 + ++YG + D IGC L + F+KNG LG AF +P Sbjct 1134 WREEPGVNEGESYGSSYKKGDIIGCGLSFTSREIFFTKNGMYLGTAFSN----VYGVFYP 1189 Query 230 ACVLKNAELKFN--FGEEEFKFPPKDGFV 256 + + FG FKF + Sbjct 1190 SVAFNEPGISITGVFG-PPFKFSQVTLML 1217 Score = 72.5 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 74/200 (37%), Gaps = 25/200 (13%) Query 89 NKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGC-RATKGLMKGKHYYEVSCHDQGLCRV 147 N +N D+ C G ++T+ Y+E+ + ++ Sbjct 850 NSLTLNIEDKSR---------CSYRLPTSGSKGIAKSTQPFSSSFTYFELFITNGNGDKI 900 Query 148 --GWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YGEEFTMHDTIGCYLDIDKG 201 G +T +++ G + +G+ G G K + + YG F+ D +GC D Sbjct 901 CFGLTTNDHPIEVYPGNYQGSYGYSGDG-KCYFGTNEGRVYGPSFSSGDVVGCGYDSSSK 959 Query 202 HVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF---NFGEEEFKFPPKDGFVA- 257 + F+KNG LG+A + + L+P L+N FG ++ P+ Sbjct 960 TLYFTKNGVYLGVAAQKVNLI---GLYPTVGLQNPGESVVINFFGPFSYRGAPEKPSKQS 1016 Query 258 -LSKAPDGYIVKSQHSGNAQ 276 + + I+ S+ + Sbjct 1017 TIKDSGGSSIIPSEDLIPKE 1036 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 47/115 (41%), Gaps = 16/115 (14%) Query 134 YYEVSCH---DQGLCRVGWSTMQASL--DLGTDKFGFGFGGTGKKSHNKQ-FDNYGEEFT 187 Y+EV +G VG S +G + +GF G+K + + YG F Sbjct 1577 YFEVYLEGHDKKGSITVGLSHSTYPFIKHIGREPKSYGFSSEGEKYGGSEIGEPYGPFFF 1636 Query 188 -MHD------TIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKN 235 D IGC ++ + F+KNG LG+AF + + L+P+ + Sbjct 1637 FDGDSIASSCVIGCGINTSTRDIFFTKNGHYLGVAF---SRVTSDPLYPSISFRG 1688 >sp|Q2VPA6|HELQ_MOUSE Helicase POLQ-like OS=Mus musculus OX=10090 GN=Helq PE=1 SV=2 Length=1069 Score = 86.0 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 64/323 (20%), Positives = 114/323 (35%), Gaps = 63/323 (20%) Query 360 NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 LS + +V+DE ++ +G I M + +V K Q+I SATL+ +V+ L Sbjct 412 RLSTLGLVVVDELH-MIGEGSRGAILEM--TLAKVLYTSKTTQIIGMSATLN--NVEDLQ 466 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH-IRTDDVHAKDNTRPG 478 + + L E L + I D A D Sbjct 467 AF-------------------LKAEYYTSQFRPVELKEFLKVNDTIYEVDSQAADGMTFS 507 Query 479 ANSPEMWSEAIKILKGEYAVRAIKEHKMD-QAIIFCRTKIDCDNLEQYFIQ--------- 528 +SEA+K + + V + E + ++FC +K +C+N+ + + Sbjct 508 RLLSYKYSEALKKMDPDRLVALVTEVIPNYSCLVFCPSKKNCENVAEMLCKFLSKDYLNH 567 Query 529 ------------------QGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 + K+ F H ERK E + G + L Sbjct 568 REKEKCEVIKSLRNIGNGKVCPVLKRTVPFGIAYHHSGLTSEERKLLEEAYSTGVLCLLT 627 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQNYVHR------IGRVGRAE--RMGLAISLVATE 622 CT A G+++ VI + P ++ R +GR GRA G +I L+ + Sbjct 628 CTSTLAAGVNLPA-RRVI-LRAPYVANTFLKRNQYKQMVGRAGRAGIDTAGESILLLQEK 685 Query 623 KEKVWYHVCSSRGKGCYNTRLKE 645 ++ + S + C + ++E Sbjct 686 DKQQVLELISGPLETCCSHLVEE 708 >sp|Q2HG76|MPH1_CHAGB ATP-dependent DNA helicase MPH1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) OX=306901 GN=MPH1 PE=3 SV=1 Length=1134 Score = 86.0 bits (211), Expect = 7e-16, Method: Composition-based stats. Identities = 32/182 (18%), Positives = 68/182 (37%), Gaps = 6/182 (3%) Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 E+ +AI+F + + + + Q + K ++ + +E+FK Sbjct 547 ENSNTRAIVFSEYRDSAEEIVRLLNNQPLIRATVFVGQADSKRSEGMKQKQQIETIEKFK 606 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 G L+ T + G+DI V ++ + R+GR GR R G + L+ Sbjct 607 NGGFNVLVATSIGEEGLDIGQVDLIVCYDASASPIRMLQRMGRTGRK-RAGNIVLLLMKG 665 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH-LNCTISQVEPDIKVPV 681 KE+ ++ +L +G + ++ L + I + + + DI + Sbjct 666 KEE--EKFLEAKDNYQKMQQLICNGDGFTFRHD--LSTRIVPRDIRPEVDKRHVDIPIEN 721 Query 682 DE 683 + Sbjct 722 SQ 723 Score = 40.5 bits (93), Expect = 0.069, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 81/283 (29%), Gaps = 34/283 (12%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR-DQLSVLENGVDIVVGTPG 348 + V P++ LA Q + P+ + L+ G Q + TP Sbjct 234 VFVAPTKPLASQQVQACLGIA---GIPRSQATLLTGETPPVLRQGEWESKR--LFFMTPQ 288 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 L + +S G + + LV+DEA Y + + K ++++ + Sbjct 289 TLMNDLSKGYADPKSIVLLVVDEAHRATGDYAYVKVVEFIRRF-------SKSIRILALT 341 Query 408 ATLHS--FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHV---VVPVNPKTDRLWERLGKS 462 AT S V+ + + + + + + VH V +P + R S Sbjct 342 ATPGSTVEGVQDIIDNLGISHVEIRTEESIDIRQYVHSRNIDTVTFDPSDEMHEVRGLFS 401 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 V M +LK A +Q + F Sbjct 402 KALKPLVDKLSAQNIYYGRDPMNLTTFGLLKSRQEWLAGPGGHANQGVKF---------- 451 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + H + HG + + L F+ + Sbjct 452 --MMMAVFSILQSLAHLIKLLNFHGIKPFY---NGLAEFRSSE 489 >sp|Q58796|Y1401_METJA Probable ATP-dependent helicase MJ1401 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1401 PE=3 SV=1 Length=808 Score = 84.8 bits (208), Expect = 1e-15, Method: Composition-based stats. Identities = 69/375 (18%), Positives = 123/375 (33%), Gaps = 68/375 (18%) Query 257 ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKA----LIVEPSRELAEQTLNNIKQFKKY 312 L D I+ + SG + + + N K L + P LA Q +FK+ Sbjct 223 GLLNGDDLLIISATSSGKTLIGELAGIKNLIKTGKKFLFLVPLVALANQ---KYLEFKER 279 Query 313 IDNPKLRELLIIG-GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 + + L +G G + DI+VGT +D L+ T L + +V+DE Sbjct 280 YEKLGFKVSLRVGLGRIGKKVDVETSLDADIIVGTYEGIDYLIRTK--RLKDIGTVVIDE 337 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 L + R+ I ++ K Q I SAT+ + K+L++++ V Sbjct 338 IHSL---NLEERGARLDGLIGRLRFLFKEAQKIYLSATI--GNPKELAKQL--NAKLVLY 390 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 G P + ++ +L IK Sbjct 391 NGR---PVPLERHIIFCKNDFAKL-------------------------------NIIKE 416 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 + K Q +IF ++ + L + +G HG + Sbjct 417 IVKREWQNISKFGYRGQCLIFTYSRKRAEYLAKALKSKG---------IKAEFYHGGMEY 467 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP-----DEKQNYVHRIGRV 606 +R++ + F ++ ++ T + G+D VI +L + GR Sbjct 468 IKRRKVEDDFANQKIQCVVTTAALSAGVDFPA-STVILESLAMGADWLNPAEFQQMCGRA 526 Query 607 GRAE--RMGLAISLV 619 GR +G LV Sbjct 527 GRKGMHEIGKVYLLV 541 Score = 41.7 bits (96), Expect = 0.028, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 18/87 (21%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTG--------- 54 E+ + E+ + ++ +Q S+ +L G D+L+ + T SGKT Sbjct 192 DELDIPEELKEIIKSRGIEELLPVQTLSVKAGLLNGDDLLIISATSSGKTLIGELAGIKN 251 Query 55 --------AFSIPVIQIVYETLKDQQE 73 F +P++ + + + +E Sbjct 252 LIKTGKKFLFLVPLVALANQKYLEFKE 278 >sp|A4RHU9|DCL2_PYRO7 Dicer-like protein 2 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=DCL2 PE=3 SV=3 Length=1485 Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 54/329 (16%), Positives = 110/329 (33%), Gaps = 20/329 (6%) Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVV 446 M + P+ + R+ + T +K L K + DS V V Sbjct 313 MGQRTPKSLRELDRILTKL--DTYTQNQMKALQRKSSSLFRELGQWAVDSYIYNVVEKVS 370 Query 447 PVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM 506 ++ ++ L L N P S + + + +K + +R ++ ++ Sbjct 371 NLDARSSWLGGWLDDEQRYLHRAIQGINALPV--SAAIPAPEMTSIKLQVLLRILRGYEG 428 Query 507 DQA-IIFCRTKIDCDNLEQYFI---------QQGGGPDKKGHQFSCVCLHGDRKPHERKQ 556 I+F + + L Q + G + + +H + + Sbjct 429 SPVGIVFVKERATAGILSQLLAIIPDINARYKVGCMVGTSRYMSRKMNIHEVLQQGDDLL 488 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 LE+F+ G + L+ T V GID+ VI +P ++++ R GR R R Sbjct 489 ALEKFRSGAINLLVATSVLEEGIDVPVCNLVICFDMPANLKSFIQRRGR-ARM-RESKLH 546 Query 617 SLVATE---KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQV 673 ++ + K W + ++ + N + D + + + + V Sbjct 547 LMIEEDSLVSVKDWGALEAAMKQRYENDMRELDHLAQVEEEDEMDVPPLHSRTTAAKVTV 606 Query 674 EPDIKVPVDEFDGKVTYGQKRAAGGGSYK 702 + D K ++ F VT Q+ Y Sbjct 607 D-DAKGHLEHFCRVVTRSQQYVDASPEYL 634 Score = 42.8 bits (99), Expect = 0.015, Method: Composition-based stats. Identities = 25/139 (18%), Positives = 50/139 (36%), Gaps = 15/139 (11%) Query 241 NFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE 300 + E F+ + + G + A++ +T P + + P+ L Sbjct 67 AYQLEMFQASMQQNIIVSMDTGSGKTQVAVLRIRAELERT---PPEKRVWFLAPTVALCA 123 Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN------GVDIVVGTPGRLDDLV 354 Q I+ K+ +++ G D S ++ V +VV T L + + Sbjct 124 QQYEVIR------SQIKVANSIVMTGDDNVDSWSDVQTWDAVLANVRVVVCTYMILFEAL 177 Query 355 STGKLNLSQVRFLVLDEAD 373 S + + + LV+DEA Sbjct 178 SHAFVTMDSISLLVMDEAH 196 >sp|H2KY86|HELQ_CAEEL Helicase POLQ-like OS=Caenorhabditis elegans OX=6239 GN=helq-1 PE=3 SV=1 Length=923 Score = 84.8 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 64/374 (17%), Positives = 117/374 (31%), Gaps = 71/374 (19%) Query 337 ENGVDIVVGTPGRLDDLVSTGKLN--LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV 394 V + V T + + L+++ L +V +V+DE + G + Q+ Sbjct 260 RKRVSVYVATIEKANMLINSLITQGQLDRVGMVVVDELHMIGDGGRG----AILEQLLAK 315 Query 395 TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 Q++ SATL + D K + + V N + Sbjct 316 FLYKGTGQIVGMSATLPNIDDLKFA---------------------LRAFVYSTNFRPVE 354 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 L E + D G + + I + A+IFC Sbjct 355 LTEFVKIGQTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQLLAKLI---PKNSAVIFCP 411 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL----------------------------H 546 K +C+N+ + ++ + H Sbjct 412 NKKNCENVAVLIAKTLPAHIRQAKRAESDAFLQSYLSDNDDERMDAVLKQCILSGVAYHH 471 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLP------DEKQNYV 600 ERK F +G + + T A G+++ V VI + P K Y+ Sbjct 472 SGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLP-VRRVI-IKAPMVGRERLGKAQYL 529 Query 601 HRIGRVGRAE--RMGLAISLV-ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN--E 655 GR GRA G I+++ A E+E+ + + S C ++ E+ + + Sbjct 530 QMAGRAGRAGFDTKGDCITIIKAGEEERWFREMLKSDIPRCMSSLSSEESMGSFILDCVV 589 Query 656 MQLLSEIEEHLNCT 669 ++L IEE + Sbjct 590 LKLAENIEEIMTAV 603 >sp|I3XHK1|FANCM_ARATH DEAD-box ATP-dependent RNA helicase FANCM OS=Arabidopsis thaliana OX=3702 GN=FANCM PE=2 SV=1 Length=1344 Score = 84.0 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 44/263 (17%), Positives = 86/263 (33%), Gaps = 17/263 (6%) Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG--HQFSCV 543 + K+L+ +K+ K + IIF + ++ G Q S Sbjct 449 PKLSKMLEILVDHFKVKDPKTSRVIIFSNFRGSVRDIMNALSNIGDMVKATEFIGQSSGK 508 Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 L G + ++ LE+F+ G ++ T + G+DI V VI + R+ Sbjct 509 TLKG-QSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRM 567 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI- 662 GR GR G + L EK Y + G+ ++ +++ + Sbjct 568 GRTGRKNN-GRVVVLACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVY 626 Query 663 ---EEHLNCTISQ-------VEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTV 712 +H+ +I Q ++ + F K+T + + L ++ Sbjct 627 KPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQKKLTPAETHMLAKYYNNPDEEKLRVSL 686 Query 713 QELAALEKEAQTSFLHLGYLPNQ 735 + S +H Q Sbjct 687 IAFPHF--QTLPSKVHKVMHSRQ 707 >sp|O18475|DPOLQ_DROME DNA polymerase theta OS=Drosophila melanogaster OX=7227 GN=PolQ PE=1 SV=1 Length=2059 Score = 84.0 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 59/400 (15%), Positives = 125/400 (31%), Gaps = 78/400 (20%) Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVST--GKLNLSQVRF 366 + + R GG L + + T + + +V+ + L + Sbjct 298 MQDLLTPAGYRVEGFYGGYTPPGGFESL----HVAICTIEKANSIVNKLMEQGKLETIGM 353 Query 367 LVLDEADGLLSQGYSDFINRMH-NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF 425 +V+DE + +G + + + +G ++QVI SATL + +L + + Sbjct 354 VVVDEVHLISDKGRGYILELLLAKILYMSRRNGLQIQVITMSATLENV---QLLQSWLDA 410 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 ++ ++ + + V + + + + + + E Sbjct 411 ELYITNYRPVALKEMIKVGTVIYDHRLKLVRDVAKQKVL--------------LKGLEND 456 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ---------------- 529 S+ + +L E + I+FC +K C+NL Sbjct 457 SDDVALLCIETLLEGC------SVIVFCPSKDWCENLAVQLATAIHVQIKSETVLGQRLR 510 Query 530 ---------------------GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 G K ++C H ER FK G ++ Sbjct 511 TNLNPRAIAEVKQQLRDIPTGLDGVMSKAITYACAFHHAGLTTEERDIIEASFKAGALKV 570 Query 569 LICTDVAARGIDIHGVPYVINVTLPD------EKQNYVHRIGRVGRAERM--GLAISLVA 620 L+ T + G+++ +I P Y IGR GR + G +I + Sbjct 571 LVATSTLSSGVNLPARRVLI--RSPLFGGKQMSSLTYRQMIGRAGRMGKDTLGESILICN 628 Query 621 TEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 ++ + S + + L DG + ++++S Sbjct 629 EINARMGRDLVVSELQPITSC-LDMDGSTHLKRALLEVIS 667 >sp|O59025|HELS_PYRHO ATP-dependent DNA helicase Hel308 OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=hel308 PE=3 SV=1 Length=715 Score = 83.6 bits (205), Expect = 3e-15, Method: Composition-based stats. Identities = 74/415 (18%), Positives = 146/415 (35%), Gaps = 46/415 (11%) Query 249 FPPKDGFV--ALSKAPDGYIVKSQHSGNAQVTQT----KFLPNAPKALIVEPSRELAEQT 302 +PP+ + + K + I SG + + + L KA+ + P + LAE+ Sbjct 25 YPPQAEALTSGILKGENALIAIPTASGKTLIAEIAIVNRLLKEGGKAVYLVPLKALAEEK 84 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS 362 K + + L+ + G ++D+ G DI++ T + D L+ G + Sbjct 85 FKEFKDW----EELGLKVAMATGDYDSKDEWL---GGYDIIIATAEKFDSLLRHGSSWIR 137 Query 363 QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL-HSFDVKKLSEK 421 V+ LV+DE + S+ + + Q+ R Q+I SAT+ + ++ + Sbjct 138 NVKVLVVDEIHLIGSRDRGATLEFIITQM------LNRAQIIGLSATIGNPEELAEWLNA 191 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 + W +K V + WE L I+ + + Sbjct 192 KLIKSDWRPVKLRRGVFYQGFVFWEDGKTEKFNSWEELVYDAIKRSKG-SLVFVNMRRKA 250 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + E K ++ + ++E K ++LE+ K Q Sbjct 251 EKTALELSKKIRNFLTKKELREL-----------KELAESLEE---NPTNEKLAKALQGG 296 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI-------NVTLPD 594 H ER E FKKG ++ ++ T + GI+ ++ + Sbjct 297 VAFHHAGLGREERVLVEENFKKGLIKVVVATPTLSAGINTPAFRVIVRDTWRYSEFGMER 356 Query 595 EKQNYVHR-IGRVGR--AERMGLAISLVATEK-EKVWYHVCSSRGKGCYNTRLKE 645 + + +GR GR + +G AI + TE+ V + + ++ E Sbjct 357 IPILEIQQMMGRAGRPKYDEVGEAIIVSTTEEPSTVMERYIKGKPEKLFSQLSNE 411 Score = 38.2 bits (87), Expect = 0.37, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 30/63 (48%), Gaps = 1/63 (2%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVIQI 63 E+ + I + +++ QAE++ IL G + L+A T SGKT I ++ Sbjct 4 EELRIDERIKEVLKKRGISELYPPQAEALTSGILKGENALIAIPTASGKTLIAEIAIVNR 63 Query 64 VYE 66 + + Sbjct 64 LLK 66 >sp|Q94545|ASH2_DROME Set1/Ash2 histone methyltransferase complex subunit ASH2 OS=Drosophila melanogaster OX=7227 GN=ash2 PE=1 SV=2 Length=556 Score = 82.9 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 80/217 (37%), Gaps = 56/217 (26%) Query 85 ASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGL 144 V + + +DR I D L + + RAT + +G Y+EV+ + Sbjct 303 ILVPHSVLLALHDRAPQLKISEDRLAVTGE--RGYCMVRATHSVNRGCWYFEVTIEEMPD 360 Query 145 ---CRVGWSTMQASLD--LGTDKFGFGFGGT-GKKSHNKQFDNYGEEFTMHDTIGCYLDI 198 R+GW +L LG DKFG+ + G K +Y + + DT+G +++ Sbjct 361 GAATRLGWGREYGNLQAPLGYDKFGYSWRSRKGTKFTESHGKHYSDAYVEGDTLGFLIEL 420 Query 199 DK-------------------------------------------GHVKFSKNGKDLGLA 215 + ++F KNG+ G+A Sbjct 421 PEEASLDYLPNTFKDRPLVKFKSHLYYEDKDKITETLKNLHILQGSRIEFFKNGQSQGVA 480 Query 216 FEIPPHMKNQALFPACVL-KNAELKFNFGEEEFKFPP 251 FE + + FPA + K+A + NFG FK+P Sbjct 481 FE---DIYAGSYFPAISIHKSATVSVNFG-PAFKYPE 513 >sp|O67837|RECG_AQUAE ATP-dependent DNA helicase RecG OS=Aquifex aeolicus (strain VF5) OX=224324 GN=recG PE=3 SV=1 Length=792 Score = 83.3 bits (204), Expect = 4e-15, Method: Composition-based stats. Identities = 65/439 (15%), Positives = 139/439 (32%), Gaps = 100/439 (23%) Query 229 PACVLKNAELKFNFGEEEFKF--PPKDGFVALSK------APDGYIVKSQHSGN---AQV 277 P + L+ + FK + + + + + SG A + Sbjct 341 PKVNVDEKFLRKAIEKLPFKLTRAQERAIKEILEDLSRDVPMNRLLQGDVGSGKTIVAIL 400 Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 T + + + ++ P+ LA Q + K+F + + + + L+ G + + SV + Sbjct 401 TSLAVVKSGYQVAVMVPTEILAHQ---HYKKFSEMLKDYGVNVALLTGSLTPSQKKSVYK 457 Query 338 N----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 + + ++VGT + K+ + ++++DE + + P Sbjct 458 HVKEGNIHVLVGT-----HALIQDKVEFKNLGYVIIDEQHRFGVMQRKLLLEKGKGLYPH 512 Query 394 VTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTD 453 +V SAT + L+ I +D+ D +P V+ + ++ Sbjct 513 C---------LVMSAT---PIPRTLALSIYGD---LDISIIDELPPGRKEVITKLYFES- 556 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFC 513 + E +K Y + + E Sbjct 557 -----------------------QKEEVYKKVEEELKKGNKVYVIYPLIEESEK-----L 588 Query 514 RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTD 573 K + E++ K + LHG E+ +E FK+ + L+ T Sbjct 589 NLKAATEEYERW--------KKLFPDRKVLLLHGKMPDKEKLAVMEEFKR-EGDILVSTT 639 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRI---------GRVGRAERMGLAISLVATEKE 624 V GID+ ++ HR GRVGR+++ + +V E Sbjct 640 VIEVGIDVPEATVMVIEDA--------HRFGLSQLHQLRGRVGRSDKEAYCLLVVPDE-- 689 Query 625 KVWYHVCSSRGKGCYNTRL 643 + + + + R+ Sbjct 690 -----IKNEKNESLKRLRV 703 >sp|A6ZVS0|MPH1_YEAS7 ATP-dependent DNA helicase MPH1 OS=Saccharomyces cerevisiae (strain YJM789) OX=307796 GN=MPH1 PE=3 SV=1 Length=993 Score = 82.9 bits (203), Expect = 5e-15, Method: Composition-based stats. Identities = 57/320 (18%), Positives = 104/320 (33%), Gaps = 33/320 (10%) Query 413 FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL----WERLGKSHIRTDD 468 ++K E + P +V V D + + + ++ D Sbjct 410 KNIKNQCENYLSDPKFVGHGKLQCVRDELMEFFQKRGSDSRVIIFTELRESALEIVKFID 469 Query 469 VHAKDNTRPGAN---------SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 A D RP E+ KG V + + ++ + RTK Sbjct 470 SVANDQIRPHIFIGQARAKEGFDEVKYTRKHAPKGRKKVERLHRQEQEKFLEAERTKRAA 529 Query 520 -DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D LE+ + G + + +K+ + FKKG+ L+CT + G Sbjct 530 NDKLERSARRTGSSEEAQI---------SGMNQKMQKEVIHNFKKGEYNVLVCTSIGEEG 580 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 +DI V +I + R+GR GR R G + L ++ + + Sbjct 581 LDIGEVDLIICYDTTSSPIKNIQRMGRTGRK-RDGKIVLLFSSNESYKFERAMED----- 634 Query 639 YNTRLKEDGGCTIWYNEMQLL--SEIEEHLNCTISQV--EPDIKVPVDEFDGKVTYGQKR 694 Y+T I Y + + +I + T+ + E +I +++ D + Y + Sbjct 635 YSTLQALISKQCIDYKKSDRIIPEDIIPECHETLITINDENEIINEMEDVDEVIRYATQC 694 Query 695 AAGGGSYKGHVDILAPTVQE 714 G VQE Sbjct 695 MMGKKVKPKKAITKKKRVQE 714 Score = 42.8 bits (99), Expect = 0.012, Method: Composition-based stats. Identities = 64/452 (14%), Positives = 142/452 (31%), Gaps = 67/452 (15%) Query 290 LIVEPSREL-AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 + P+R L A+Q + D + L+ R+++ + + TP Sbjct 134 IFTAPTRPLVAQQIKACLGITGIPSDQTAI---LLDKSRKNREEIWANKR---VFFATPQ 187 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI----------NRMHNQIPQVTSDG 398 +++ + G L+ + LV+DEA + R+ SD Sbjct 188 VVENDLKRGVLDPKDIVCLVIDEAHRATGSYAYTNVVKFIDRFNSSYRLLALTATPASDL 247 Query 399 KRLQVIVCSATLHSFDVKK------LSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 + +Q +V + + +++ + +++ + D + + + V P Sbjct 248 EGVQEVVNNLDISKIEIRTEESMDIVKYMKKRKKEKIEVPLLLEIEDIIEQLGIAVKPVL 307 Query 453 DRLWER-----------------LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + E I + + ++ + ++LK Sbjct 308 QQAIELGIYEECDPSQINAFKAMQQSQKIIANPTIPEGIKWRNFFILQLLNNVGQMLKRL 367 Query 496 --YAVRAIKEHKMDQAIIFC--------RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 Y +R + ++ F KI + ++ + Sbjct 368 KIYGIRTFFNYFQNKCTEFTTKYNLKKSTNKIAAEFYYHPILKNIKNQCENYLSDPKFVG 427 Query 546 HGDRKPHERKQNLERF--KKGDVRFLICTDVAARGIDIHG-VPYVINVTLPDEKQNYVHR 602 HG R + +E F + D R +I T++ ++I + V N D+ + ++ Sbjct 428 HGKL-QCVRDELMEFFQKRGSDSRVIIFTELRESALEIVKFIDSVAN----DQIRPHIF- 481 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 IG+ RA + G E + H R K R +++ + ++ Sbjct 482 IGQ-ARA-KEGF------DEVKYTRKHAPKGRKKVERLHRQEQEKFLEAERTKRAANDKL 533 Query 663 EEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 E T S E I + +V + K+ Sbjct 534 ERSARRTGSSEEAQISGMNQKMQKEVIHNFKK 565 >sp|Q9UT23|MPH1_SCHPO ATP-dependent DNA helicase fml1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fml1 PE=1 SV=2 Length=834 Score = 82.5 bits (202), Expect = 7e-15, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 73/221 (33%), Gaps = 2/221 (1%) Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 +H + S + + + ++ K + +IF + + Sbjct 388 NHENYRPLMDDIEILLRDQSFVGHPKLEHLERIVTEYFEKEQTKDTRIMIFVEIRSSAEE 447 Query 522 LEQYFIQQ-GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 + ++ + S V + + +++F+KG+V LI T + G+D Sbjct 448 ILRFLGKFYPNVRPAIFIGQSAVRKAAGMSQKLQNETVKQFQKGEVNTLIATSIGEEGLD 507 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 I V +I + R+GR GR R G L+ KE+ + + + Sbjct 508 IGEVDMIICYDASASPIRMLQRMGRTGRK-RKGYIYMLLTRGKEEAKWERAKDAYRTLQD 566 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 + G + L + + + ++ + + V Sbjct 567 NIVSGRGLSLSEKSYRILPEKFRPVCDKRVIEIPKENEEVV 607 Score = 41.3 bits (95), Expect = 0.034, Method: Composition-based stats. Identities = 39/279 (14%), Positives = 101/279 (36%), Gaps = 20/279 (7%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRE 297 + +F + +F K F + A + K+ + + ++ P + + + P++ Sbjct 69 INVSFRDYQFNIVQKALFENVLVALPTGLGKTFIAAVVMMNYLRWFPKS-YIVFMAPTKP 127 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG 357 L Q ++ K PK + + G V + ++ ++ TP + + + G Sbjct 128 LVTQ---QMEACYKITGIPKSQTAELSGHVPVTTRNQYYQSR-NVFFVTPQTILNDIKHG 183 Query 358 KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKK 417 + +++ LV+DEA + + + K +++ SAT ++ Sbjct 184 ICDRTRISCLVIDEAHRSTGNYAYVEVVHLLSL------SNKNFRILALSAT-PGNKLEA 236 Query 418 LSEKIMH-FPTWVDLKGEDSV-------PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 + I + ++++ E+S+ V V ++ + + +R Sbjct 237 IQNVIDSLHISRIEIRTENSIDISQYVQKKEVDFFPVDLSAEITDIRDRFSSILEPMLQK 296 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K N N+ ++ S + K + + + +Q Sbjct 297 LNKGNYYRIQNAKDITSFTVVQAKQAFLAMSGQNFPANQ 335 >sp|Q6AYJ1|RECQ1_RAT ATP-dependent DNA helicase Q1 OS=Rattus norvegicus OX=10116 GN=Recql PE=1 SV=1 Length=621 Score = 82.1 bits (201), Expect = 7e-15, Method: Composition-based stats. Identities = 22/106 (21%), Positives = 45/106 (42%), Gaps = 9/106 (8%) Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +K II+C ++ D + + + G H + +P +R + ++ Sbjct 311 RYKGKSGIIYCFSQKDSEQVTISLQKLG---------VRAGTYHANMEPEDRTKVHTQWS 361 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGR 608 +++ ++ T GID V +VI+ ++ +NY GR GR Sbjct 362 ANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGR 407 >sp|Q58900|Y1505_METJA Putative ATP-dependent RNA helicase MJ1505 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1505 PE=3 SV=2 Length=778 Score = 82.1 bits (201), Expect = 8e-15, Method: Composition-based stats. Identities = 72/431 (17%), Positives = 139/431 (32%), Gaps = 101/431 (23%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K LI+ PSR L EQ N +KQ ++ + + + G + + + + + G I + TP Sbjct 59 KVLILAPSRPLVEQHYNRLKQVLNIDED---KIIALTGKIQPKKRAELYKKG-KIFIATP 114 Query 348 GRLDDLVSTGKLNLSQVRFLVL--------------------DEADGL-LSQGYSDFINR 386 +++ + G++N+ + L+ D+ L L+ I++ Sbjct 115 QVIENDIIAGRINVDEFILLIADEAHHTTGDHAYAFVAKKFKDKCHILGLTASPGSDIDK 174 Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP-------- 438 + + + ++ T DVK K+ P +DL E Sbjct 175 VMEICENLGIEHVEVR------TEDDEDVKPYIAKVKLIPIRIDLPNEFKRALKLINEAL 228 Query 439 -----------------------------------DTVHHVVVPVNPKTDRLWERLGKSH 463 + V + ++ V + +L Sbjct 229 KERLKILKDAGVINSIADVTKTELIELNNKLFSYDEEVKYELIKVCSEALKLMHAKELLE 288 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI---------------------K 502 + V + + + K AV + + Sbjct 289 SQGKSVFLNYINKLSMQRTKSAKSIVNDEKVREAVNLLMKSDVEHPKLGKVVDMVKNILE 348 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 ++K ++ IIF + + + + Q G + Q + E+ + +ERFK Sbjct 349 KNKDERIIIFAQYRDTVEKIVNLLTQNGIKAIRFIGQANKEGK--GMSQKEQIEAIERFK 406 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA-- 620 K + L+ T V+ GIDI V Y+I + ++ R GR R G L+A Sbjct 407 K-EGSVLVSTSVSEEGIDIPSVNYIIFYEPVPSEIRFIQRRGRAMR-GEGGKVYVLIAKG 464 Query 621 TEKEKVWYHVC 631 T E + Sbjct 465 TADEAYYRSAL 475 >sp|P40562|MPH1_YEAST ATP-dependent DNA helicase MPH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MPH1 PE=1 SV=1 Length=993 Score = 82.5 bits (202), Expect = 8e-15, Method: Composition-based stats. Identities = 57/320 (18%), Positives = 104/320 (33%), Gaps = 33/320 (10%) Query 413 FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL---------WERLGKSH 463 ++K E + P +V V D + + + E + Sbjct 410 KNIKNQCENYLSDPKFVGHGKLQCVRDELMDFFQKRGSDSRVIIFTELRESALEIVKFID 469 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILK----GEYAVRAIKEHKMDQAIIFCRTKIDC 519 DD A + E + E K G V + + ++ + RTK Sbjct 470 SVADDQIRPHIFIGQARAKEGFDEVKYTRKHAPKGRKKVERLHRQEQEKFLEAERTKRAA 529 Query 520 -DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 D LE+ + G + + +K+ + FKKG+ L+CT + G Sbjct 530 NDKLERSARRTGSSEEAQI---------SGMNQKMQKEVIHNFKKGEYNVLVCTSIGEEG 580 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGC 638 +DI V +I + R+GR GR R G + L ++ + + Sbjct 581 LDIGEVDLIICYDTTSSPIKNIQRMGRTGRK-RDGKIVLLFSSNESYKFERAMED----- 634 Query 639 YNTRLKEDGGCTIWYNEMQLL--SEIEEHLNCTISQV--EPDIKVPVDEFDGKVTYGQKR 694 Y+T I Y + + +I + T+ + E +I +++ D + Y + Sbjct 635 YSTLQALISKQCIDYKKSDRIIPEDIIPECHETLITINDENEIINEMEDVDEVIRYATQC 694 Query 695 AAGGGSYKGHVDILAPTVQE 714 G VQE Sbjct 695 MMGKKVKPKKAITKKKRVQE 714 Score = 40.5 bits (93), Expect = 0.061, Method: Composition-based stats. Identities = 62/452 (14%), Positives = 137/452 (30%), Gaps = 67/452 (15%) Query 290 LIVEPSREL-AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 + P+R L A+Q + D + L+ R+++ + + TP Sbjct 134 IFTAPTRPLVAQQIKACLGITGIPSDQTAI---LLDKSRKNREEIWANKR---VFFATPQ 187 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI----------NRMHNQIPQVTSDG 398 +++ + G L+ + LV+DEA + R+ SD Sbjct 188 VVENDLKRGVLDPKDIVCLVIDEAHRATGSSAYTNVVKFIDRFNSSYRLLALTATPASDL 247 Query 399 KRLQVIVCSATLHSFDVKK------LSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 + +Q +V + + +++ + +++ + D + + + V P Sbjct 248 EGVQEVVNNLDISKIEIRTEESMDIVKYMKKRKKEKIEVPLLLEIEDIIEQLGMAVKPVL 307 Query 453 DRLWER-----------------LGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE 495 + E I + + ++ + ++LK Sbjct 308 QQAIELGIYEECDPSQINAFKAMQQSQKIIANPTIPEGIKWRNFFILQLLNNVGQMLKRL 367 Query 496 --YAVRAIKEHKMDQAIIFC--------RTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 Y +R + ++ F KI + ++ + Sbjct 368 KIYGIRTFFNYFQNKCTEFTTKYNLKKSTNKIAAEFYYHPILKNIKNQCENYLSDPKFVG 427 Query 546 HGDRKPHERKQNLERF--KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVH-R 602 HG R + ++ F + D R +I T+ + + V + + Q H Sbjct 428 HGKL-QCVRDELMDFFQKRGSDSRVIIFTE-----LRESALEIVKFIDSVADDQIRPHIF 481 Query 603 IGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEI 662 IG+ RA + G E + H R K R +++ + ++ Sbjct 482 IGQ-ARA-KEGF------DEVKYTRKHAPKGRKKVERLHRQEQEKFLEAERTKRAANDKL 533 Query 663 EEHLNCTISQVEPDIKVPVDEFDGKVTYGQKR 694 E T S E I + +V + K+ Sbjct 534 ERSARRTGSSEEAQISGMNQKMQKEVIHNFKK 565 >sp|A7EFH4|MPH1_SCLS1 ATP-dependent DNA helicase mph1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=mph1 PE=3 SV=1 Length=1235 Score = 82.1 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 84/259 (32%), Gaps = 20/259 (8%) Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + +P+ ++ ER+ + D + T + +A L G+ Sbjct 581 IVNSPEFKKMMERIQGWINKEDFIGHPKLTYLCDTVLNHFLDAGAGLMGD-----NMPPS 635 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG-DRKPHERKQNLERFKKG 564 + I+F + +++ + + G ++ + + +FK G Sbjct 636 STRVIVFTEYRDSAEDIARVLNKHGPMIRASVFVGQSDSKRSEGMNQEKQLETIRKFKAG 695 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + ++ T + G+DI V ++ + R+GR GR R G + L+ KE Sbjct 696 GINVIVATSIGEEGLDIGEVDLIVCYDSSSSPIRMLQRMGRTGRK-RAGKIVLLLMRGKE 754 Query 625 KVWYH--------VCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE--IEEHLNCTISQVE 674 + Y + G T + I + + IE L T + Sbjct 755 EDSYKKSKDNYEQIQRMISSGSRFTFRHDLSARIIPRKVKPEVDKRFIEIPLENTQ---D 811 Query 675 PDIKVPVDEFDGKVTYGQK 693 P + P + +K Sbjct 812 PSLPEPKRRAKPRKKLAKK 830 Score = 40.5 bits (93), Expect = 0.076, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 86/265 (32%), Gaps = 26/265 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + + P++ L Q + + P+ ++ G + + + TP Sbjct 310 QIVFMAPTKPLVSQQVKACFEIA---GIPRSSTTMLTGDQSPALRAEEWAEK-RVFFMTP 365 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 +++ + TG + ++ +V+DEA + + + + +V+ + Sbjct 366 QTVENDLKTGIADPKKIALIVVDEAHRATGNYAYTKVVQFLRRF------NESFRVLALT 419 Query 408 ATLHS--FDVKKLSEKIMHFPTWVDLKGEDSVPDTVH---HVVVPVNPKTDRLWERLGKS 462 AT S V+++ + + + + + + VH + ++P + + R S Sbjct 420 ATPGSSVEAVQEVIDNLEIAEVEIRTEDSIDIKEYVHRRDITEILIDPSDEIIMIRELFS 479 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 V+ + + N M +L A A K Q ++ Sbjct 480 KALQPLVNLLCSQKAYYNKDPMGLTQYGMLTARKAWMASGAGKSAQM-----------SI 528 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHG 547 + GH + HG Sbjct 529 KGMMNALFTVLTSMGHAIKLLNFHG 553 >sp|Q8TDG4|HELQ_HUMAN Helicase POLQ-like OS=Homo sapiens OX=9606 GN=HELQ PE=1 SV=2 Length=1101 Score = 82.1 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 116/331 (35%), Gaps = 61/331 (18%) Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT 409 ++ L+ TG+++ + +V+DE ++ +G M + ++ K Q+I SAT Sbjct 445 VNSLIETGRID--SLGLVVVDELH-MIGEGSRGATLEM--TLAKILYTSKTTQIIGMSAT 499 Query 410 LHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 L+ +V+ L +K + + P + + ++ + D Sbjct 500 LN--NVEDL-QKFLQ----------------AEYYTSQFRPVELKEYLKINDTIYEVDSK 540 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ 529 T + + K+ + ++FC +K +C+N+ + + Sbjct 541 AENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIPNYSCLVFCPSKKNCENVAEMICKF 600 Query 530 ---------------------------GGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 K+ F H ERK E + Sbjct 601 LSKEYLKHKEKEKCEVIKNLKNIGNGNLCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYS 660 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR------IGRVGRAE--RMGL 614 G + CT A G+++ VI + P + ++ R IGR GRA +G Sbjct 661 TGVLCLFTCTSTLAAGVNLPA-RRVI-LRAPYVAKEFLKRNQYKQMIGRAGRAGIDTIGE 718 Query 615 AISLVATEKEKVWYHVCSSRGKGCYNTRLKE 645 +I ++ + ++ + + + CY+ ++E Sbjct 719 SILILQEKDKQQVLELITKPLENCYSHLVQE 749 >sp|Q0W6L1|HELS_METAR ATP-dependent DNA helicase Hel308 OS=Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50) OX=351160 GN=hel308 PE=3 SV=1 Length=740 Score = 81.7 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 68/423 (16%), Positives = 135/423 (32%), Gaps = 84/423 (20%) Query 246 EFKFPPKDGFV--ALSKAPDGYIVKSQHSGN---AQVTQTKFLPNAPKALIVEPSRELAE 300 +PP+ + L + SG A++ K + KA+ + P + LA Sbjct 22 PELYPPQAEAIRQGLLDGKNLLAAIPTASGKTLLAEMAMLKSIAEGGKAIYIVPLKALAS 81 Query 301 QTLNNIKQFKKYIDNP-KLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL 359 + + +F K P ++ + G +RD+ + DI+V T + D L+ G Sbjct 82 EKYDRFLEFSKLPIKPDGVKVGIATGDFDSRDEYLGEK---DIIVATSEKTDSLLRNGAS 138 Query 360 NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 LS + +V DE + S + + ++ LQ++ SAT+ + K L+ Sbjct 139 WLSGLSVVVADEVHLIDSPNRGPTLEV---TLAKLRKINVNLQILALSATI--GNAKALA 193 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 K M ++ + V + K R G + + + Sbjct 194 -KWMDAALVQSEWRPTTLKEGVFYGRAITFKKEKRTVNNAGPDEVNSLVADTLE------ 246 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 + Q ++F T+ +++ Q + + + Sbjct 247 -------------------------EGGQCLVFANTRKSSESIAQKVARSLSKKLQPAEK 281 Query 540 FSCVCL---------------------------HGDRKPHERKQNLERFKKGDVRFLICT 572 L H K R+ + F++ ++ + CT Sbjct 282 EQLAKLKQDVLRHAETDTCEKLAECVGNGVAFHHAGLKGEHRRIVEDGFRQNILKVIACT 341 Query 573 DVAARGIDIHGVPYVI--------NV-TLPDEKQNYVHRIGRVG--RAERMGLAISLVAT 621 A G+++ +I N ++P Y GR G R + G A+ + Sbjct 342 PTLAAGLNLPARRVIIRDYKRFDVNYGSVPIPVLEYKQMAGRAGRPRLDPYGEAVLIAKN 401 Query 622 EKE 624 E Sbjct 402 YDE 404 Score = 40.1 bits (92), Expect = 0.085, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 38/112 (34%), Gaps = 16/112 (14%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVIQI 63 +E+ + + QAE+I +L G ++L A T SGKT + +++ Sbjct 4 AELNLPQALKDFYTGSGIPELYPPQAEAIRQGLLDGKNLLAAIPTASGKTLLAEMAMLKS 63 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDR---GSAFAIGSDGLCCQ 112 + E K L YDR S I DG+ Sbjct 64 IAEGGKA------------IYIVPLKALASEKYDRFLEFSKLPIKPDGVKVG 103 >sp|P0DMI1|HELS_ARCFU ATP-dependent DNA helicase Hel308 OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=hel308 PE=1 SV=1 Length=691 Score = 80.9 bits (198), Expect = 2e-14, Method: Composition-based stats. Identities = 86/482 (18%), Positives = 166/482 (34%), Gaps = 57/482 (12%) Query 243 GEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKA---LIVEPSRELA 299 G EE P + + + + +G + + + A K L V P R LA Sbjct 22 GIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYVVPLRALA 81 Query 300 EQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKL 359 + + K+++K LR + G +RD+ DI+V T + D L+ Sbjct 82 GEKYESFKKWEK----IGLRIGISTGDYESRDEHL---GDCDIIVTTSEKADSLIRNRAS 134 Query 360 NLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS 419 + V LV+DE LL + + ++ K L+VI SAT +V +++ Sbjct 135 WIKAVSCLVVDEIH-LLDSEKRGATLEIL--VTKMRRMNKALRVIGLSATAP--NVTEIA 189 Query 420 EKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGA 479 E + D + V + + + R+ K ++ A++ Sbjct 190 EWLDADYYVSDWRPVPLVEGVLCEGTLELFDGAFSTSRRV-KFEELVEECVAENGGVLVF 248 Query 480 NSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 S +E + + ++ +++AI+ + E ++ +KG Sbjct 249 ESTRRGAEKTAVKLSAITAKYVENEGLEKAIL--------EENEGEMSRKLAECVRKGAA 300 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI--NVTLPDEKQ 597 F H +R+ + F++G+++ ++ T A G+++ ++ Sbjct 301 FH----HAGLLNGQRRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRSLYRF----D 352 Query 598 NYVHRI---------GRVGRAE--RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKED 646 Y RI GR GR G AI +V + + R R+ Sbjct 353 GYSKRIKVSEYKQMAGRAGRPGMDERGEAIIIVGKRDRE----IAVKRYIFGEPERITSK 408 Query 647 GGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVD 706 G + LS I + T+ ++E D F + Q + + V Sbjct 409 LGVE-THLRFHSLSIICDGYAKTLEELE-------DFFADTFFFKQNEISLSYELERVVR 460 Query 707 IL 708 L Sbjct 461 QL 462 >sp|Q1RI08|PRIA_RICBR Primosomal protein N' OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=priA PE=3 SV=1 Length=648 Score = 80.6 bits (197), Expect = 2e-14, Method: Composition-based stats. Identities = 70/465 (15%), Positives = 156/465 (34%), Gaps = 53/465 (11%) Query 229 PACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKS-QHSGNAQVTQ---TKFLP 284 +K ++ NF + K L+ + ++K SG +V ++L Sbjct 104 KPIKVKEQKINNNFTLPDLSEEQKQALQMLNDSNKPILIKGVTGSGKTEVYFYLIAEYLA 163 Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 +AL++ P L+ Q +N K+ ++ +P + + +LE+ V IV+ Sbjct 164 KGKQALVMLPEIALSTQIINRFKE--RFGFDPIIWNSSVTKAQKKMILRGILEDKVKIVI 221 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF--INRMHNQIPQVTSDGKRLQ 402 G R S+ L + +V+DE Y + V S + Q Sbjct 222 G--AR-----SSLFLPFKNLGLIVIDEEH---DDSYKQDDGVLYNARDTAIVRSTFDKAQ 271 Query 403 VIVCSAT----------LHSFDVKKLSEKI----MHFPTWVDLKGEDSVPDTVHHVVVPV 448 +++CSAT + + V LS + + +D+ E+ +P + + + Sbjct 272 IVLCSATPSIETMYNANIGKYSVINLSSRYKNAVLPNIEMIDMTKEE-LPKNCYLSNILI 330 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD- 507 + L + +A + + + ++ H Sbjct 331 KAIKNNLENKEQTLLFLNRRGYAPLMLCKSCGHKFTCKYCSSWMVVHKSSKKLECHHCGY 390 Query 508 QAIIF--CRTKIDCDNLEQ-----YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 Q+ IF C ++ ++L I++ + + + + P + Q L + Sbjct 391 QSKIFNSCPECLEDESLAICGPGIERIEEEAKTLFPNSKIAVISKDHVKNPEKIAQLLHQ 450 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYV--INVTLPDEKQNY---------VHRIG-RVGR 608 + ++ LI T + +G + V ++ L + +H++G R GR Sbjct 451 MENLEIDILIGTQMITKGYHFPNLTLVGVVDADLGSNHADLRSSERAFQLLHQVGGRAGR 510 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWY 653 G+ ++ ++ R + L+ + Sbjct 511 GNSKGMVYLQSYYPDNIIFSYIKDEREDNFFVNELEVRKAADMPP 555 >sp|Q6P4T2|U520_MOUSE U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Mus musculus OX=10090 GN=Snrnp200 PE=1 SV=1 Length=2136 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 63/398 (16%), Positives = 138/398 (35%), Gaps = 52/398 (13%) Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA-RDQLSVLENGVDIVVGTPGRL 350 + P R L + F K + + + G ++++S I+V TP + Sbjct 541 IAPMRSL---VQEMVGSFGKRLATYGITVAELTGDHQLCKEEISA----TQIIVCTPEK- 592 Query 351 DDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMH-NQIPQVTSDGKRLQVIVC 406 D+++ + VR +VLDE LL + + I + + +++I Sbjct 593 WDIITRKGGERTYTQLVRLIVLDEIH-LLHDDRGPVLEALVARAIRNIEMTQEDVRLIGL 651 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL +++ ++ + P ++S P + V + K + + + I Sbjct 652 SATLPNYE--DVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEK-----KAIKRFQIM 704 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + V+ K G N ++ + K + D +F R + + Sbjct 705 NEIVYEKIMEHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRT 764 Query 526 FIQQGGGPDKKGHQFSCVCLH-GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 +Q + K +H +R + F ++ L+ T A G+++ Sbjct 765 EAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAH 824 Query 585 PYVINVTLPDEKQ----------NYVHRIGRVGR--AERMGLAISLVATEKEKVWYHVCS 632 +I T + + + +GR GR + G I + + + + + + + Sbjct 825 TVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLN 884 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + E Q++S++ + LN I Sbjct 885 QQ-----------------LPIESQMVSKLPDMLNAEI 905 Score = 64.8 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 63/397 (16%), Positives = 138/397 (35%), Gaps = 39/397 (10%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEE-EFKFPPKDGF--VALSKAPDGYIVK 268 L + P + + P L+N+ + + ++ F P + + + ++ Sbjct 1291 LPEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGA 1350 Query 269 SQHSGN-----AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 SG + + + + + + P LAEQ + + K+ D + +L+ Sbjct 1351 PTGSGKTICAEFAILRMLLQNSEGRCVYITPMEALAEQVYMDWYE--KFQDRLNKKVVLL 1408 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGY 380 G + L +L G +I++ TP + D++S + N+ + V+DE L+ Sbjct 1409 TGETST--DLKLLGKG-NIIISTPEK-WDILSRRWKQRKNVQNINLFVVDEVH-LIGGEN 1463 Query 381 SDFINRMHNQIPQVTSDGKR--LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 + + +++ ++S +R V + S+ ++ DV L + Sbjct 1464 GPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHW------------LGCSATST 1511 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 H V PV + + + R + +SP+ + + + Sbjct 1512 FNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRL 1571 Query 499 RAIKEHKMDQAII----FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 AI A I F +L Y + K+ LH P ER Sbjct 1572 TAIDILTTCAADIQRQRFLHCTEK--DLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMER 1629 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 + + F G ++ ++ + G+++ VI + Sbjct 1630 RLVEQLFSSGAIQVVVASRSLCWGMNVAAH-LVIIMD 1665 >sp|F1LNJ2|U520_RAT U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Rattus norvegicus OX=10116 GN=Snrnp200 PE=1 SV=1 Length=2139 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 63/398 (16%), Positives = 138/398 (35%), Gaps = 52/398 (13%) Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA-RDQLSVLENGVDIVVGTPGRL 350 + P R L + F K + + + G ++++S I+V TP + Sbjct 541 IAPMRSL---VQEMVGSFGKRLATYGITVAELTGDHQLCKEEISA----TQIIVCTPEK- 592 Query 351 DDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMH-NQIPQVTSDGKRLQVIVC 406 D+++ + VR +VLDE LL + + I + + +++I Sbjct 593 WDIITRKGGERTYTQLVRLIVLDEIH-LLHDDRGPVLEALVARAIRNIEMTQEDVRLIGL 651 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL +++ ++ + P ++S P + V + K + + + I Sbjct 652 SATLPNYE--DVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEK-----KAIKRFQIM 704 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + V+ K G N ++ + K + D +F R + + Sbjct 705 NEIVYEKIMEHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRT 764 Query 526 FIQQGGGPDKKGHQFSCVCLH-GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 +Q + K +H +R + F ++ L+ T A G+++ Sbjct 765 EAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAH 824 Query 585 PYVINVTLPDEKQ----------NYVHRIGRVGR--AERMGLAISLVATEKEKVWYHVCS 632 +I T + + + +GR GR + G I + + + + + + + Sbjct 825 TVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLN 884 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + E Q++S++ + LN I Sbjct 885 QQ-----------------LPIESQMVSKLPDMLNAEI 905 Score = 64.8 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 63/397 (16%), Positives = 138/397 (35%), Gaps = 39/397 (10%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEE-EFKFPPKDGF--VALSKAPDGYIVK 268 L + P + + P L+N+ + + ++ F P + + + ++ Sbjct 1294 LPEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGA 1353 Query 269 SQHSGN-----AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 SG + + + + + + P LAEQ + + K+ D + +L+ Sbjct 1354 PTGSGKTICAEFAILRMLLQNSEGRCVYITPMEALAEQVYMDWYE--KFQDRLNKKVVLL 1411 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGY 380 G + L +L G +I++ TP + D++S + N+ + V+DE L+ Sbjct 1412 TGETST--DLKLLGKG-NIIISTPEK-WDILSRRWKQRKNVQNINLFVVDEVH-LIGGEN 1466 Query 381 SDFINRMHNQIPQVTSDGKR--LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 + + +++ ++S +R V + S+ ++ DV L + Sbjct 1467 GPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHW------------LGCSATST 1514 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 H V PV + + + R + +SP+ + + + Sbjct 1515 FNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRL 1574 Query 499 RAIKEHKMDQAII----FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 AI A I F +L Y + K+ LH P ER Sbjct 1575 TAIDILTTCAADIQRQRFLHCTEK--DLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMER 1632 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 + + F G ++ ++ + G+++ VI + Sbjct 1633 RLVEQLFSSGAIQVVVASRSLCWGMNVAAH-LVIIMD 1668 >sp|A6RIS1|MPH1_BOTFB ATP-dependent DNA helicase MPH1 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=mph1 PE=3 SV=2 Length=1229 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 32/235 (14%), Positives = 82/235 (35%), Gaps = 12/235 (5%) Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 V +P ++ +R+ + + + T + +A L G+ Sbjct 587 VVNDPDFKKMMDRIQSWINKEEFIGHPKLTHLCDTVLNHFLDAGAGLTGD-----NMPPS 641 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG-DRKPHERKQNLERFKKG 564 + I+F + +++ + + G ++ + + +FK G Sbjct 642 STRVIVFTEYRDSAEDIARVLNKHGPMIKASVFVGQSDSKRSEGMNQEKQLETIRKFKAG 701 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKE 624 + ++ T + G+DI V ++ + R+GR GR R G + L+ KE Sbjct 702 GINVIVATSIGEEGLDIGEVDLIVCYDSSSSPIRMLQRMGRTGRK-RAGKIVLLLMRGKE 760 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ---LLSEIEEHLNCTISQVEPD 676 + Y + R+ G + +++ + +++ + ++ P+ Sbjct 761 EDSYKKSKDNYEQMQ--RMISSGSRFTFRHDLSARIIPRDVKPEVEKRFIEIPPE 813 Score = 40.1 bits (92), Expect = 0.093, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 61/162 (38%), Gaps = 22/162 (14%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE----NGVDIV 343 + + + P++ L Q + + P+ ++ G DQ L + + Sbjct 316 QIVFMAPTKPLVSQQVKACFEIA---GIPRSSTTMLTG-----DQTPALRAEEWDEKRVF 367 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQ 402 TP +++ + TG + ++ LV+DEA Y+ + + K + Sbjct 368 FMTPQTVENDLKTGIADPKRIALLVVDEAHRATGKYAYTKVVEFLRRF-------NKSFR 420 Query 403 VIVCSATLHS--FDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 V+ +AT S V+++ + + + + + + VH Sbjct 421 VLALTATPGSTVEAVQEVIDNLEIAEVEIRTEESIDIKEYVH 462 >sp|Q9HE09|MFH2_SCHPO Putative ATP-dependent DNA helicase fml2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fml2 PE=3 SV=1 Length=783 Score = 80.6 bits (197), Expect = 3e-14, Method: Composition-based stats. Identities = 25/169 (15%), Positives = 58/169 (34%), Gaps = 4/169 (2%) Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG-DRK 550 L E+ + ++ + +IF + + + + + Sbjct 457 LLKEHFKDTSEGYQNQRVMIFTEFRNTAEYITTTLLAIRPMVRASLFIGQANSAYSTGMN 516 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE 610 ++K+ +++F+ G + L+ T + G+DI +I + R+GR GR Sbjct 517 QMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYDASSSPIRTIQRMGRTGRK- 575 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 + G L+ + E S+ ++ E G ++ L Sbjct 576 KSGKVFVLLTEDCEDS--KWERSQVSYRRVQKVIESGKKIALKKDVPRL 622 >sp|Q9UT24|BRR2_SCHPO Pre-mRNA-splicing factor brr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=brr2 PE=1 SV=1 Length=2176 Score = 80.9 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 125/353 (35%), Gaps = 38/353 (11%) Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL 361 + F K + +R + G Q + I+V TP + D+++ +L Sbjct 587 VQEMVNNFSKRLTPYNIRVAELTGDSQLTKQQI---SETQIIVTTPEK-WDIITRKANDL 642 Query 362 SQV---RFLVLDEADGLLSQGYSDFINRMHNQIPQ-VTSDGKRLQVIVCSATLHSFDVKK 417 S V R +++DE LL + + +I + ++++++ SATL ++ Sbjct 643 SYVNLVRLVIIDEVH-LLHDERGPVLESIVARIFRHQEETLEQVRLVGLSATLPNYT--D 699 Query 418 LSEKIMHFPTW-VDLKGEDSVPDTVHHVVVPVNPKT--DRLWERLGKSHIRTDDVHAKDN 474 ++ + P + P + + + KT R+ + + K+ Sbjct 700 VASFLHVDPKKGLFYFDSTYRPCPLKQEFIGITEKTPFKRMQTTNEACYEKVMQHAGKNQ 759 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 +S + ++ + ++ + H + + D + E + D Sbjct 760 VLIFVHSRKETAKTARFIRDKALEEETIGHLL---------RSDAASREILRAEADSTSD 810 Query 535 KKGHQ---FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN-- 589 + + H + +R+ + + F G ++ L+ T A G+++ +I Sbjct 811 ENLKDLLPYGFAIHHAGMRREDRQTSEDLFADGTIQVLVSTATLAWGVNLPAHTVIIKGT 870 Query 590 --VTLPD------EKQNYVHRIGRVGR--AERMGLAISLVATEKEKVWYHVCS 632 + Q+ + +GR GR + G I + A + + + + + Sbjct 871 QVYSPEKGIWTELSPQDVLQMLGRAGRPQFDTYGEGIIITAHSELQYYLSLMN 923 >sp|Q6F9D2|UVRB_ACIAD UvrABC system protein B OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=uvrB PE=3 SV=1 Length=675 Score = 80.2 bits (196), Expect = 3e-14, Method: Composition-based stats. Identities = 57/351 (16%), Positives = 105/351 (30%), Gaps = 51/351 (15%) Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 P L D + L L++DE+ + I M+ + Sbjct 324 AAPPTLFDYIPEDAL-------LIIDESHVTV-----PQIGAMYKGDRSRKENLVNYGFR 371 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 + SA L + M F W + VP TV P + ++ + + + Sbjct 372 LPSA---------LDNRPMKFEEWERI-----VPTTVFVSATPAKYELEKSDQIVEQVVR 417 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T + + RP + I I K ++ +I TK ++L Sbjct 418 PTGLIDPEIEIRPVLTQVDDVLSEINIRK----------EMDERVLITTLTKRMAEDLTS 467 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Y + G LH D ER + + + G L+ ++ G+D+ V Sbjct 468 YLKEYG---------VKVAYLHSDIDTVERVKIIHELRTGVYDVLVGINLLREGLDMPEV 518 Query 585 PYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 V + +++ + IGR R G AI + + + + + Sbjct 519 SLVAILDADKEGFLRSERSLIQTIGRAAR-NIKGKAILYADRMTDSMQKAIDETERRREK 577 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTY 690 + G T Q + EI+ +E I + Sbjct 578 QIEFNKIHGITPRSAVRQKVKEIDTGEVFNDDDIEGKISEQARALSADERH 628 >sp|Q9V0A9|HELS_PYRAB ATP-dependent DNA helicase Hel308 OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=hel308 PE=3 SV=1 Length=715 Score = 79.8 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 70/398 (18%), Positives = 140/398 (35%), Gaps = 48/398 (12%) Query 249 FPPKDGFV--ALSKAPDGYIVKSQHSGNAQVTQT----KFLPNAPKALIVEPSRELAEQT 302 +PP+ + + + + + SG + + K L KA+ + P + LAE+ Sbjct 25 YPPQAEALTSGVLEGENLLVAIPTASGKTLIAEIAIANKLLEEGGKAVYIVPLKALAEEK 84 Query 303 LNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLS 362 K +++ L+ + G ++D+ DI++ T + D L+ G + Sbjct 85 FREFKDWERL----GLKVAMATGDYDSKDEWL---GKYDIIIATAEKFDSLLRHGSSWIR 137 Query 363 QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL-HSFDVKKLSEK 421 V+ LV+DE + S+ + + Q+ R Q+I SAT+ + ++ + Sbjct 138 DVKMLVIDEIHLIGSRDRGATLEFIITQM------LGRAQIIGLSATIGNPEELAEWLNA 191 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 + W +K V + WE L ++ A + Sbjct 192 KLIRSDWRPVKLRKGVFYQGFVFWEDGGSERYNSWEELVYDAVKKGKG-ALVFVNMRRKA 250 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 + E K +K + ++E + L + + S Sbjct 251 EKTALELAKKVKNYLDRKELRELR---------------ELAESLEENPTNEKLAKALLS 295 Query 542 CVCLH-GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI-------NVTLP 593 V H ER + F+KG ++ ++ T + GI+ +I + Sbjct 296 GVAFHHAGLGRDERVLVEDNFRKGLIKVVVATPTLSAGINTPAFRVIIRDTWRYSEFGME 355 Query 594 DEKQNYVHR-IGRVG--RAERMGLAISLVATEKEKVWY 628 V + +GR G R + +G AI +V+T +E Sbjct 356 RIPVLEVQQMMGRAGRPRYDEVGEAI-IVSTTEEPSLV 392 Score = 39.3 bits (90), Expect = 0.13, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (2%) Query 6 EMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVIQIV 64 E+ V +I + + E QAE++ +L G ++L+A T SGKT I + + Sbjct 5 ELNVSEKIKEILRERGIEELYPPQAEALTSGVLEGENLLVAIPTASGKTLIAEIAIANKL 64 Query 65 YE 66 E Sbjct 65 LE 66 >sp|O73946|HELS_PYRFU ATP-dependent DNA helicase Hel308 OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=hel308 PE=1 SV=1 Length=720 Score = 79.8 bits (195), Expect = 4e-14, Method: Composition-based stats. Identities = 95/520 (18%), Positives = 187/520 (36%), Gaps = 63/520 (12%) Query 243 GEEEFKFPPKDGFV-ALSKAPDGYIVKSQHSGNAQVTQT----KFLPNAPKALIVEPSRE 297 G E F P + + + + I SG + + + L KA+ + P + Sbjct 20 GIESFYPPQAEALKSGILEGKNALISIPTASGKTLIAEIAMVHRILTQGGKAVYIVPLKA 79 Query 298 LAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG 357 LAE+ + ++K LR + G ++D+ DI++ T + D L+ G Sbjct 80 LAEEKFQEFQDWEK----IGLRVAMATGDYDSKDEWL---GKYDIIIATAEKFDSLLRHG 132 Query 358 KLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKK 417 + V+ LV DE + S+ + + + + Q+I SAT+ + ++ Sbjct 133 SSWIKDVKILVADEIHLIGSRDRGATLEVILAHM------LGKAQIIGLSATI--GNPEE 184 Query 418 LSEKIMHFPTWVDLKGEDSVPDTVHH--VVVPVNPKTDRL--WERLGKSHIRTDD--VHA 471 L+E ++ V + V + V + DR WE L IR + Sbjct 185 LAE-WLNAELIVSDWRPVKLRRGVFYQGFVTWEDGSIDRFSSWEELVYDAIRKKKGALIF 243 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG 531 + R S+ +K L + +RA+ E D+LE+ + Sbjct 244 VNMRRKAERVALELSKKVKSLLTKPEIRALNEL--------------ADSLEENPTNEKL 289 Query 532 GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI--- 588 +G H ER E F+KG ++ ++ T + GI+ +I Sbjct 290 AKAIRGG---VAFHHAGLGRDERVLVEENFRKGIIKAVVATPTLSAGINTPAFRVIIRDI 346 Query 589 ----NVTLPDEKQNYVHRI-GRVGR--AERMGLAISLVATEK-EKVWYHVCSSRGKGCYN 640 + + VH++ GR GR + +G I + ++ +V H + + ++ Sbjct 347 WRYSDFGMERIPIIEVHQMLGRAGRPKYDEVGEGIIVSTSDDPREVMNHYIFGKPEKLFS 406 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGS 700 E + Q+L+ I T+ ++ I + K TY + Sbjct 407 QLSNESNLRS------QVLALIATFGYSTVEEILKFISNTFYAYQRKDTYSLEEKIRNIL 460 Query 701 Y--KGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFR 738 Y + I ++ L +T+ L++ ++F+ Sbjct 461 YFLLENEFIEISLEDKIRPLSLGIRTAKLYIDPYTAKMFK 500 Score = 37.4 bits (85), Expect = 0.51, Method: Composition-based stats. Identities = 17/64 (27%), Positives = 28/64 (44%), Gaps = 1/64 (2%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVIQI 63 E+ V I ++E QAE++ IL G + L++ T SGKT I ++ Sbjct 4 DELRVDERIKSTLKERGIESFYPPQAEALKSGILEGKNALISIPTASGKTLIAEIAMVHR 63 Query 64 VYET 67 + Sbjct 64 ILTQ 67 >sp|Q6FPQ3|MPH1_CANGA ATP-dependent DNA helicase MPH1 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=MPH1 PE=3 SV=1 Length=1052 Score = 80.2 bits (196), Expect = 4e-14, Method: Composition-based stats. Identities = 51/317 (16%), Positives = 112/317 (35%), Gaps = 23/317 (7%) Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 + K E+ + P ++ + + D + NP R+ + V D+ Sbjct 407 ITKECEEKIKDPNFLGHGKLEHLRDELTQFFYE-NPFESRVIIFTELRESALEIVKCIDS 465 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD-------QAIIFCRTKIDCDNLEQYFI 527 P ++ K +G V+ +++H + + ++D + + Sbjct 466 MENSEIRPHIFIGQAKGKEGFDEVKFVRKHGPKGRKKSDREKRLEEERRMDEEKKQAALQ 525 Query 528 QQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 ++ ++ L G ++K+ +++FK G L+CT + G+DI V + Sbjct 526 EKLERTSRRTGSSEEAQLSG-MNQKQQKEVIKKFKSGLYNVLVCTSIGEEGLDIGEVDLI 584 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW-------YHVCSSRGKGCYN 640 I + R+GR GR R G + + ++ + + Y++ + Sbjct 585 ICYDTTSSPIKNIQRMGRTGRK-RDGRIVLMFSSNEASKFDQSMNDYYNLQKLISQHLVQ 643 Query 641 TR-----LKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRA 695 R L + + +SE ++ LN + + I+ GK+ +K Sbjct 644 YRKSDRILPPENQEPECEKKFIEVSEEDQELN-NMEDTDDVIRFATQCMLGKIPKTKKGR 702 Query 696 AGGGSYKGHVDILAPTV 712 G + KG + V Sbjct 703 DKGKAKKGKTFFMPDNV 719 Score = 37.8 bits (86), Expect = 0.49, Method: Composition-based stats. Identities = 35/224 (16%), Positives = 87/224 (39%), Gaps = 22/224 (10%) Query 290 LIVEPSREL-AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 + P+R L A+Q + D + L+ R+++ + + TP Sbjct 129 IFTAPTRPLVAQQIKACLGITGIPHDQTAI---LLDKTRKNREEIWANKR---VFFTTPQ 182 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSA 408 +++ + G LN + LV+DEA + + N+ +++ +A Sbjct 183 VVENDLKRGVLNPKDIVCLVIDEAHRATGSYAYANLVKFINRF------NSSYRLLALTA 236 Query 409 TLHSFDVKKLSEKIMH-FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 T + D++ + E + + + ++++ E+S+ D V ++ + + + ++ + + Sbjct 237 T-PATDIEGVQEVVNNLNISKIEIRTEESM-DIVKYMKKKIKDRVN------IQTTVEIE 288 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 ++ + + I A+ A K + QAII Sbjct 289 NIVEQLGIAILPVLNQAVELGIYESCPPSAINAFKAMQKSQAII 332 >sp|Q0CEI2|DCL2_ASPTN Dicer-like protein 2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dcl2 PE=3 SV=2 Length=1377 Score = 79.8 bits (195), Expect = 6e-14, Method: Composition-based stats. Identities = 57/337 (17%), Positives = 110/337 (33%), Gaps = 27/337 (8%) Query 388 HNQIPQVTSDGKRLQVIVCS-ATLHSFDVKKLSEKIMHFPTWVDLKG---EDSVPDTVHH 443 Q+ + T DGK LQ + + T + +++ E+ H + +L G + + ++ Sbjct 262 VKQLRRSTFDGKALQKALLTRKTYCNESLRRFVERSCH--IFQELGGWAVDYFIHASIRR 319 Query 444 VVVPVNPKTDRL-WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK 502 + ++ L W+ K ++ + + PE + + K L+ + + Sbjct 320 LREKIDDSALMLDWDNEEKEYLASFLSNIATIQSDPPRRPEDFIPSPK-LEALISFLSST 378 Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK----------PH 552 + +IF + + L D+ G + Sbjct 379 DDSTFSGLIFAKQRATVTVLATLLSVHPLTKDRFRCAAFVGWSGGGNRKDLIGELLSMQM 438 Query 553 ERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM 612 +R L F+ G ++ TDV GIDI VI P +++V R GR R + Sbjct 439 QRD-TLSEFRSGQKNLIVATDVLEEGIDISACSVVICYDKPANVKSFVQRRGR-ARRKES 496 Query 613 GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE--MQLLSEIEEHLNCTI 670 AI ++ + E C E ++++E E + T Sbjct 497 TFAILFSTDDELCDLRKWQLLEEAMIEAYQDDERKRCEALALETMAEVVTERFE-VESTG 555 Query 671 SQVEPDIKVPVDEF----DGKVTYGQKRAAGGGSYKG 703 + + D V + Y R Y G Sbjct 556 AVLTADTAVARLHHFCSILPQQPYVDNRPELSFEYDG 592 Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 28/160 (18%), Positives = 58/160 (36%), Gaps = 17/160 (11%) Query 238 LKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALI--VEPS 295 N+ E F+ ++ + G + + P+ LI + P+ Sbjct 15 CPRNYQTEMFEASLQENIIVAMDTGSGKTHVALLRI-----MNELETRRPQKLIWFLAPT 69 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR---DQL--SVLENGVDIVVGTPGRL 350 L Q + I + + P ++ + G +Q + + +VV T L Sbjct 70 VALCFQQHDVITK-----NLPAVKSRTLTGQDKVELWTEQAIWDAILKDMQVVVSTHAVL 124 Query 351 DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ 390 D +S G + +SQ+ L+ DEA + + ++ I + Sbjct 125 ADAMSNGFVRVSQLGLLIFDEAHHCMRRHPANRIMQDFYH 164 >sp|A1D9Z6|DCL2_NEOFI Dicer-like protein 2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=dcl2 PE=3 SV=1 Length=1388 Score = 79.8 bits (195), Expect = 6e-14, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 98/303 (32%), Gaps = 22/303 (7%) Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGE 434 L G +I R+ T+ K ++ T +++ ++ H F + E Sbjct 254 LDIGDDPYIQRLRKSPLDDTALKKA---LLTGKTYCREQLRRFVDRSRHIFEELGEWAAE 310 Query 435 DSVPDTVHHVVVPV-NPKTDRLWERLGKSHIRT-DDVHAKDNTRPGANSPEMWSEAIKIL 492 + ++ + V N W+ K+++ + N P + + K Sbjct 311 YYIYASIKQLGDRVRNSYMSGDWDEAEKAYLVDFLSKIPASEIQLALNDPGSFRISPKFE 370 Query 493 KGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK-- 550 + ++ E + +IF + + + ++ +G Sbjct 371 SLLNFLDSLDEREF-SGLIFVKQRATVSAMTSLLSVHPCTRERFRCAAYVGWSNGSASKD 429 Query 551 --------PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHR 602 +R L+ F+ G +I TDV GIDI V+ P +++V R Sbjct 430 ILGDLLNMQLQRD-TLDDFRSGRKNLIIATDVLEEGIDISACSVVVCYDKPPNLKSFVQR 488 Query 603 IGRVGRAERMGLAISLVATE---KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL 659 GR R ++ AI + W + + + + + + + +++ Sbjct 489 RGR-ARRKQSTFAIMFPTDDASADVSKWQDLEQAMIEAYQDDERQLQSVSALESLDEEVM 547 Query 660 SEI 662 + Sbjct 548 ERL 550 Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 61/175 (35%), Gaps = 14/175 (8%) Query 230 ACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKA 289 AC + N+ E + K+ + G + A++ P Sbjct 7 ACQGASPYQPRNYQLEMLEASMKENIIVAMDTGSGKTHIAVLRIKAEL---DICPPDKLV 63 Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR---DQL--SVLENGVDIVV 344 + P+ L Q I + P +R + G +Q + NG ++V Sbjct 64 WFLAPTVALCIQQHEVIAS-----NLPAVRTRTLTGLDKVELWTEQSIWDAVLNGYRVIV 118 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK 399 T L D +S G + +S++ L+ DEA + ++ I R P +T G Sbjct 119 STHAVLADALSHGFVKMSRLALLIFDEAHHCTRRHAANKIMRDFYH-PTLTKSGP 172 >sp|Q2JN87|UVRB_SYNJB UvrABC system protein B OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=uvrB PE=3 SV=1 Length=695 Score = 79.4 bits (194), Expect = 6e-14, Method: Composition-based stats. Identities = 42/312 (13%), Positives = 98/312 (31%), Gaps = 38/312 (12%) Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 L+ G+ + + K Q I SAT ++++++ Sbjct 360 LVDHGFRLPSALDNRPLKAEEFWAKVHQCIFVSATPGNWELEQ----------------- 402 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + V + G + + P + + +L Sbjct 403 -----SEAQFETRVEDGKTLKFYVQGSGRVIEQVIRPTGVVDPEVHVRPTAGQVDDLLGE 457 Query 495 EYA-VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 Y + + ++ I+ TK ++L +Y ++G LH + E Sbjct 458 IYLRLERSQLGPAERVIVTTLTKRMAEDLTEYLQERG---------IRVRYLHSEITSIE 508 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGR 608 R + L+ F++G L+ ++ G+D+ V V + +++ + IGR R Sbjct 509 RIEILQDFREGAFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQMIGRAAR 568 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 G+ + T + + ++ + + T + + I L Sbjct 569 -NVRGMVVMYADTMTSSMARAIAETQRRREIQLQYNRQHNITPKPIVKKNSNAILSFLAI 627 Query 669 TISQVEPDIKVP 680 + +PD++ Sbjct 628 SRKLNDPDLEKA 639 >sp|Q8R5F7|IFIH1_MOUSE Interferon-induced helicase C domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ifih1 PE=1 SV=1 Length=1025 Score = 79.4 bits (194), Expect = 7e-14, Method: Composition-based stats. Identities = 44/235 (19%), Positives = 85/235 (36%), Gaps = 20/235 (9%) Query 452 TDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII 511 L + K + A +P+ +E + L+ + + + + II Sbjct 664 KKSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRNTILEQFTRSEESSRGII 723 Query 512 FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV-CLHGD----RKPHERKQNLERFKKGDV 566 F +T+ L Q+ ++ + + H E+K+ + +F+ G++ Sbjct 724 FTKTRQSTYALSQWIMENAKFAEVGVKAHHLIGAGHSSEVKPMTQTEQKEVISKFRTGEI 783 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAER--------MGLAIS- 617 LI T VA G+DI VI L + V GR RA+ G ++ Sbjct 784 NLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGR-ARADESTYVLVTSSGSGVTE 842 Query 618 --LVATEKEKVWYHVCSSRG---KGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLN 667 +V +EK+ Y + Y ++ E +I +M++ I + N Sbjct 843 REIVNDFREKMMYKAINRVQNMKPEEYAHKILELQVQSILEKKMKVKRSIAKQYN 897 Score = 37.8 bits (86), Expect = 0.52, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 35/103 (34%), Gaps = 4/103 (4%) Query 27 DIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGAS 86 Q E L G ++++ TGSGKT + V K +Q + GK + Sbjct 311 PYQMEVAQPALDGKNIIICLPTGSGKT---RVAVYITKDHLDKKKQASESGKVIVLVNKV 367 Query 87 VLNK-WQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGL 128 +L + ++ GL ++ + + + Sbjct 368 MLAEQLFRKEFNPYLKKWYRIIGLSGDTQLKISFPEVVKSYDV 410 >sp|O75643|U520_HUMAN U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens OX=9606 GN=SNRNP200 PE=1 SV=2 Length=2136 Score = 79.4 bits (194), Expect = 8e-14, Method: Composition-based stats. Identities = 62/398 (16%), Positives = 138/398 (35%), Gaps = 52/398 (13%) Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA-RDQLSVLENGVDIVVGTPGRL 350 + P R L + F K + + + G ++++S I+V TP + Sbjct 541 IAPMRSL---VQEMVGSFGKRLATYGITVAELTGDHQLCKEEISA----TQIIVCTPEK- 592 Query 351 DDLVSTG---KLNLSQVRFLVLDEADGLLSQGYSDFINRMH-NQIPQVTSDGKRLQVIVC 406 D+++ + VR ++LDE LL + + I + + +++I Sbjct 593 WDIITRKGGERTYTQLVRLIILDEIH-LLHDDRGPVLEALVARAIRNIEMTQEDVRLIGL 651 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSV-PDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SATL +++ ++ + P ++S P + V + K + + + I Sbjct 652 SATLPNYE--DVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEK-----KAIKRFQIM 704 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 + V+ K G N ++ + K + D +F R + + Sbjct 705 NEIVYEKIMEHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRT 764 Query 526 FIQQGGGPDKKGHQFSCVCLH-GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 +Q + K +H +R + F ++ L+ T A G+++ Sbjct 765 EAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAH 824 Query 585 PYVINVTLPDEKQ----------NYVHRIGRVGR--AERMGLAISLVATEKEKVWYHVCS 632 +I T + + + +GR GR + G I + + + + + + + Sbjct 825 TVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLN 884 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + E Q++S++ + LN I Sbjct 885 QQ-----------------LPIESQMVSKLPDMLNAEI 905 Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats. Identities = 63/397 (16%), Positives = 138/397 (35%), Gaps = 39/397 (10%) Query 212 LGLAFEIPPHMKNQALFPACVLKNAELKFNFGEE-EFKFPPKDGF--VALSKAPDGYIVK 268 L + P + + P L+N+ + + ++ F P + + + ++ Sbjct 1291 LPEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGA 1350 Query 269 SQHSGN-----AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI 323 SG + + + + + + P LAEQ + + K+ D + +L+ Sbjct 1351 PTGSGKTICAEFAILRMLLQSSEGRCVYITPMEALAEQVYMDWYE--KFQDRLNKKVVLL 1408 Query 324 IGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLDEADGLLSQGY 380 G + L +L G +I++ TP + D++S + N+ + V+DE L+ Sbjct 1409 TGETST--DLKLLGKG-NIIISTPEK-WDILSRRWKQRKNVQNINLFVVDEVH-LIGGEN 1463 Query 381 SDFINRMHNQIPQVTSDGKR--LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVP 438 + + +++ ++S +R V + S+ ++ DV L + Sbjct 1464 GPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHW------------LGCSATST 1511 Query 439 DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAV 498 H V PV + + + R + +SP+ + + + Sbjct 1512 FNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVIVFVPSRKQTRL 1571 Query 499 RAIKEHKMDQAII----FCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 AI A I F +L Y + K+ LH P ER Sbjct 1572 TAIDILTTCAADIQRQRFLHCTEK--DLIPYLEKLSDSTLKETLLNGVGYLHEGLSPMER 1629 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 + + F G ++ ++ + G+++ VI + Sbjct 1630 RLVEQLFSSGAIQVVVASRSLCWGMNVAAH-LVIIMD 1665 >sp|A7TSV4|MPH1_VANPO ATP-dependent DNA helicase MPH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294 / BCRC 21397 / CBS 2163 / NBRC 10782 / NRRL Y-8283 / UCD 57-17) OX=436907 GN=MPH1 PE=3 SV=1 Length=1012 Score = 79.0 bits (193), Expect = 9e-14, Method: Composition-based stats. Identities = 34/219 (16%), Positives = 77/219 (35%), Gaps = 19/219 (9%) Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 + +LS+ ++ L + + + + D + + HI K+N Sbjct 435 INELSDFFLNS----RLDSRVIIFTELRESALEIVKTIDNMGSSSIRPHIFIGQARGKEN 490 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 + + K + K+ ++ +A + + + +E+ + G + Sbjct 491 FDDEGFIRKNKPKGRKKADRLKRLEEDKQKQLSKA-----KQKEQEKVERSSRRTGSSEE 545 Query 535 KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 + ++K+ + +FK GD L+CT + G+DI V +I Sbjct 546 AQI---------SGMNQKQQKEVISKFKNGDYNVLVCTSIGEEGLDIGEVDMIICFDTTG 596 Query 595 EKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 + R+GR GR R G + L + + + + Sbjct 597 SPIKNIQRMGRTGRK-RDGKILLLFSGNESRKFEKAMED 634 Score = 38.2 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 91/270 (34%), Gaps = 19/270 (7%) Query 244 EEEFKFPPKDGFV-ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSREL-AEQ 301 E +F K + L P G S + ++ N K + P+R L A+Q Sbjct 89 EYQFNIVQKSLYQNTLCAIPTGMGKTFIAS-TVMLNFFRWSKNG-KIIFTAPTRPLVAQQ 146 Query 302 TLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL 361 + D + L+ R+ + + + TP +++ + G LN Sbjct 147 IKACLGITGIPHDQAAI---LLDKSRKNREDIWTQKR---VFFTTPQVIENDLKRGVLNP 200 Query 362 SQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 + LV DEA + + ++ +++ +AT D+ + E Sbjct 201 KDIICLVFDEAHRATGSYAYTNVVKFIDRF------NSSYRILALTAT-PGTDIASVQEV 253 Query 422 IMH-FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 + + + ++++ E+S+ D + ++ K + + I + K + Sbjct 254 VNNLNISNIEIRTEESM-DIIRYMKKRYKEKIEIGLTTEIEMIIEQLGIAVKPVLQQAVE 312 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAI 510 + A++ ++ + I Sbjct 313 LGIYDECHPSQINSFVAMQKSQQIIANPTI 342 >sp|Q55CI8|HELCL_DICDI Activating signal cointegrator 1 complex subunit 3-like OS=Dictyostelium discoideum OX=44689 GN=ascc3l PE=3 SV=1 Length=2237 Score = 79.4 bits (194), Expect = 9e-14, Method: Composition-based stats. Identities = 60/411 (15%), Positives = 148/411 (36%), Gaps = 42/411 (10%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA-RDQLSVLENG 339 K +A K + + P + L + F K + + + + G + Q+S Sbjct 602 KIRLDAFKIVYIAPMKSL---VQEMVGNFSKRLKSYGIVVNELTGDQSLTNKQISE---- 654 Query 340 VDIVVGTPGRLDDLVSTGKLN---LSQVRFLVLDEADGLLSQGYSDFINRMH-NQIPQVT 395 I+V TP + D+++ + V+ +++DE LL + + + + Sbjct 655 TQIIVTTPEK-WDIITRKSGDRAYTQLVKLIIIDEIH-LLHDERGPVLECIVARTLRMIE 712 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 S + ++++ SATL +++ ++ + P V P + + ++ + + Sbjct 713 STQQMVRLVGLSATLPNYE--DVATFLRVEPDGVFYFDSSYRPIPLEQQYIGISDRGIKQ 770 Query 456 WERLGK-SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 +R + + + +S ++ K L+ RA+++ +D+ I Sbjct 771 LQRCNDITFTKVSERVGDHQILIFVHSRRETAKTGKDLRD----RAVEDQSIDRYIRDPA 826 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 ++ IQ D + H +R + F ++ LI T Sbjct 827 SREILRATASKQIQNAELKDLLPYGIGIH--HAGLSRSDRSLVEDLFGDNRIQVLISTAT 884 Query 575 AARGIDIHGVPYVIN----VTL--------PDEKQNYVHRIGRVGR--AERMGLAISLVA 620 A G+++ +I P + + GR GR ++ G I + + Sbjct 885 LAWGVNLPAHTVIIKGTQIYNPEKGWCELSPLDVTQML---GRAGRPPFDKEGEGIIITS 941 Query 621 TEKEKVWYHVCSSR--GKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT 669 + + + + +++ + + +R+ ++ I +Q + + L T Sbjct 942 QHELQFYLSLLNTQLSIESQFISRIADNLNAEIVLGSIQTVRDAVNWLGYT 992 Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 78/449 (17%), Positives = 150/449 (33%), Gaps = 57/449 (13%) Query 263 DGYIVKSQHSG---NAQVTQTKFLPNAPKALI--VEPSRELAEQTLNNIKQFKKYIDNPK 317 + +I +SG A++ + PKA + + P ++LA + K + + Sbjct 1415 NAFISAPTNSGKTVCAEIALIRCFKQNPKAKVVYLAPMQDLAS------VRLKDWSNKFG 1468 Query 318 LRE--LLIIGGV--AARDQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLD 370 ++ L++ + A +L+ +I+V + D++S + L + L++D Sbjct 1469 VKSPFGLVVSDLTGDAVTDNKILDRS-NIIVTNCEK-WDILSRKWKQRKALQSINLLIVD 1526 Query 371 EADGLLSQGYSDFINRMHNQIPQV-TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV 429 E L+ Y + + +++ + T G L+VI S+++ + + L I P Sbjct 1527 ELH-LIGGEYGPTMEIVVSRMRYISTQTGNALRVIALSSSIANA--RDLVLWIGATPQTC 1583 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 + P V + + L + +V N + P Sbjct 1584 YNFHPNVRPIPVEYQIQGFEF-PHFNARMLAMTKPTVYEVAKNKNQQSIVFVPTRKLSRS 1642 Query 490 KILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDR 549 V + ++ ++ C L Y K+ Q H Sbjct 1643 LAADIIANVSSFEDTLTKPYLV-CEE----HVLTPYLEDVDSFALKQSLQMGVAFYHDGL 1697 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINV-------------TLPDEK 596 ER+ F+ G +R LI T A +D V+ + P Sbjct 1698 TERERRVVEILFRSGSIRVLIATHSVAWLLDNVFAQLVVIMGTQLYQGKDIRYIDYPIN- 1756 Query 597 QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM 656 + + IGR G+ + G + ++ + KV +C + K Y L E E Sbjct 1757 -DILQMIGRAGK--QEGGGV--ISNKVAKVLL-LCHAPKKEYYKMFLNEP-----LPVES 1805 Query 657 QLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 L + + N I V I D D Sbjct 1806 HLDHCLHDQFNSEI--VTKTITKKQDALD 1832 >sp|Q1DKI1|DCL1_COCIM Dicer-like protein 1 OS=Coccidioides immitis (strain RS) OX=246410 GN=DCL1 PE=3 SV=3 Length=1500 Score = 78.6 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 67/215 (31%), Gaps = 17/215 (8%) Query 457 ERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 E + ++ A PE+ S ++ L E ++ + H + I+F + Sbjct 395 EAEIQRIREASEIIRSHKFGDPAVRPELLSPKVRRLHHE-LLKYFERHTDTKCIVFTEQR 453 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVC-LHGDRKPHERKQNLE--RFKKGDVRFLICTD 573 L F + G + G G R+Q L F+KG+V L T Sbjct 454 HTARILCDLFSRIGTKHLRPGVLIGVRSDASGGMNISFRQQVLAVVSFRKGEVNCLFATS 513 Query 574 VAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI-----SLVATE------ 622 VA G+DI ++ L Y+ GR R A + V E Sbjct 514 VAEEGLDIPDCNLIVRFDLASTLTQYIQSRGR-ARHMNSTFAHLVERDNFVHRESVNHLQ 572 Query 623 -KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM 656 E++ C S K D N Sbjct 573 SSEEIMKRFCISLPKDRILNSDDVDALYESDRNRK 607 >sp|P96130|RECG_TREPA ATP-dependent DNA helicase RecG OS=Treponema pallidum (strain Nichols) OX=243276 GN=recG PE=3 SV=1 Length=686 Score = 78.2 bits (191), Expect = 1e-13, Method: Composition-based stats. Identities = 59/411 (14%), Positives = 131/411 (32%), Gaps = 68/411 (17%) Query 280 TKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE-- 337 K + + ++ P+ LA Q + + I +R + G V + + +LE Sbjct 313 LKIIEQGGQVALLAPTELLARQHADTAARLLAPIG---IRLAFLTGNVKSEGRAYLLEAL 369 Query 338 --NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVT 395 +++VVGT + + + +R +++DE + + + + Sbjct 370 VAGEINLVVGT-----HALFSKSVRYHDLRLVIIDEQHRFGVL----QRSALIQKGREGN 420 Query 396 SDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 GK +I+ SAT + L+ + +D+ S+P V+ + KT Sbjct 421 PQGKTPHIIMMSAT---PIPRTLALSVFGD---LDISIIKSMPGGRKPVITYIARKTK-- 472 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 A+ N E +A I + + Sbjct 473 ---------------AEKVYEFVGNEIEKGRQAYFIYPRIHDIGLTDL------------ 505 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + Y +++ +H E+++ ++ F +G V L+ T V Sbjct 506 -KSVQCMYMYLKNYFA-------RYAVAMIHSKMTEEEQQRIMKYFSEGTVHILVATSVV 557 Query 576 ARGIDIHGVPYVINVTLPDEKQNY----VHRI-GRVGRAERMGLAISLVATEKEKVWYHV 630 G+D+ ++ + + + +H++ GRVGR + + E + Sbjct 558 EVGVDVPNANCIVI----EHAERFGLSALHQLRGRVGRGDVQSYCFLMHGDEMTECAKRR 613 Query 631 CSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 G + E+ ++ E+ +P P+ Sbjct 614 LKIMGSTADGFVIAEEDLKLRGPGDVGDTKNFEQSGYSGFRVADPVRDYPI 664 >sp|Q5RF63|RECQ1_PONAB ATP-dependent DNA helicase Q1 OS=Pongo abelii OX=9601 GN=RECQL PE=2 SV=1 Length=649 Score = 77.9 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 9/114 (8%) Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +K II+C ++ D + + G H + +P ++ ++ Sbjct 311 RYKGQSGIIYCFSQKDSEQVTVSLRNLG---------IHAGAYHANLEPEDKTTVHRKWS 361 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 +++ ++ T GID V +VI+ ++ +NY GR GR + I Sbjct 362 ANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCI 415 Score = 35.1 bits (79), Expect = 2.6, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (4%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 ++ Q V ++ +Q E+I + + G +V + TG GK + +P + Sbjct 80 KDVLQNVFKL--QKFRPLQLETINVTMAGKEVFLVMPTGGGKGLCYQLPALC 129 >sp|A4RN08|MPH1_PYRO7 ATP-dependent DNA helicase MPH1 OS=Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=MPH1 PE=3 SV=1 Length=1102 Score = 78.6 bits (192), Expect = 1e-13, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 56/181 (31%), Gaps = 3/181 (2%) Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG-DRKPHERKQNLERF 561 E + I+F + + + + K ++ + + +F Sbjct 500 EGSSTRVIVFSEYRDSAEEITRVLNVHKPMISASLFVGQADSKKSEGMKQKQQIETIAKF 559 Query 562 KKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 + G L+ T + G+DI V +I + R+GR GR R G L+ Sbjct 560 RDGIFNVLVATSIGEEGLDIGQVDLIICYDASSSPIRMLQRMGRTGRK-RAGKITLLLMK 618 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 KE+ Y + + E ++ + + VE I+ Sbjct 619 GKEEDNYAKAQDNYEKMQKL-ICEGSRFNFRHDLSSRIVPRDVKPEVDKRMVEIPIENTQ 677 Query 682 D 682 D Sbjct 678 D 678 Score = 43.2 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 83/265 (31%), Gaps = 21/265 (8%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + V P++ LA Q + P+ + L+ G G + TP Sbjct 185 QMVFVAPTKPLASQQVEACLNIA---GIPRSQSTLLTG-ETKPVLREAEWEGKRLFFMTP 240 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 L + +S G + ++ LV+DEA Y I + K +V+ Sbjct 241 QTLMNDLSKGYADPKRIVLLVVDEAHRATGDYAYVKVIEFIRRF-------SKSFRVLAL 293 Query 407 SATLHSFDVKKLSEKIMHFPT-WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 +AT V+ + + I + V+++ E+S+ + + V L I Sbjct 294 TAT-PGSTVEGVQDVIDNLGVSHVEIRTEESI--DIRNYVHSREIDRVVLEPSDEMLRIS 350 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 A + +++ + + + ++ M F L+ Sbjct 351 ELFSQALKPLHSKISQQKIYIGRDPMSITTFGLLKARQDWMKGPGRFAN-----QGLKMM 405 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRK 550 + H + HG R Sbjct 406 LMAIFTILQSLAHAIKLLNYHGIRP 430 >sp|Q9Z129|RECQ1_MOUSE ATP-dependent DNA helicase Q1 OS=Mus musculus OX=10090 GN=Recql PE=1 SV=2 Length=648 Score = 77.9 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 9/114 (8%) Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +K II+C ++ D + + + G H + +P ++ + ++ Sbjct 311 RYKGQSGIIYCFSQKDSEQITISLQKLG---------IHAGTYHANMEPEDKTKVHTQWS 361 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 +++ ++ T GID V +VI+ ++ +NY GR GR + I Sbjct 362 ANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCI 415 Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Query 4 FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 F G + ++ Q V ++ +Q E+I + + D+ + TG GK+ + +P + Sbjct 73 FPWFGKVKDVLQNVFKL--QKFRPLQLETINVTMARKDIFLVMPTGGGKSLCYQLPALC 129 >sp|P84634|DCL4_ARATH Dicer-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=DCL4 PE=1 SV=2 Length=1702 Score = 78.2 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 48/271 (18%), Positives = 87/271 (32%), Gaps = 24/271 (9%) Query 380 YSDFINRMHNQIP---QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-------FPTWV 429 Y + + + + ++ D + Q ++ L L +++ + Sbjct 353 YENMLEDIKQRCLASLKLLIDTHQTQTLLSMKRLLKRSHDNLIYTLLNLGLWGAIQAAKI 412 Query 430 DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAI 489 L + V V NPK+ L + AKD S E + Sbjct 413 QLNSDH----NVQDEPVGKNPKSKICDTYLSMAAEALSSGVAKDENASDLLSLAALKEPL 468 Query 490 KILKGEYAVRAI---KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 K ++ + + + IIF + L K V L Sbjct 469 FSRKLVQLIKILSVFRLEPHMKCIIFVNRIVTARTLSCILNNLELLRSWKSDFL--VGLS 526 Query 547 GDRKPHERKQ---NLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 K R+ L+RF+ ++ L+ T V G+DI VI LP+ +++ Sbjct 527 SGLKSMSRRSMETILKRFQSKELNLLVATKVGEEGLDIQTCCLVIRYDLPETVTSFIQSR 586 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSR 634 GR R + A LV + EK + + + Sbjct 587 GR-ARMPQSEYAF-LVDSGNEKEMDLIENFK 615 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/130 (18%), Positives = 44/130 (34%), Gaps = 14/130 (11%) Query 276 QVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV 335 ++ P + + P+ L EQ I D+ + + GG S Sbjct 160 ELGHLVLSPKKSVCIFLAPTVALVEQQAKVI------ADSVNFKVAIHCGGKRIVKSHSE 213 Query 336 LENGV---DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 E + +++V TP L + + + + L+ DE N + +I Sbjct 214 WEREIAANEVLVMTPQILLHNLQHCFIKMECISLLIFDECH-----HAQQQSNHPYAEIM 268 Query 393 QVTSDGKRLQ 402 +V + LQ Sbjct 269 KVFYKSESLQ 278 >sp|P46063|RECQ1_HUMAN ATP-dependent DNA helicase Q1 OS=Homo sapiens OX=9606 GN=RECQL PE=1 SV=3 Length=649 Score = 77.5 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 9/114 (8%) Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 +K II+C ++ D + + G H + +P ++ ++ Sbjct 311 RYKGQSGIIYCFSQKDSEQVTVSLQNLG---------IHAGAYHANLEPEDKTTVHRKWS 361 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI 616 +++ ++ T GID V +VI+ ++ +NY GR GR + I Sbjct 362 ANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCI 415 Score = 38.2 bits (87), Expect = 0.30, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (4%) Query 11 PEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 +I Q V ++ +Q E+I + + G +V + TG GK+ + +P + Sbjct 80 KDILQNVFKL--EKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALC 129 >sp|O69460|RECG_MYCLE ATP-dependent DNA helicase RecG OS=Mycobacterium leprae (strain TN) OX=272631 GN=recG PE=3 SV=2 Length=743 Score = 77.5 bits (189), Expect = 2e-13, Method: Composition-based stats. Identities = 59/426 (14%), Positives = 129/426 (30%), Gaps = 63/426 (15%) Query 207 KNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYI 266 ++G+ PP A +++ + G+ E + DG +A ++ + + Sbjct 258 RHGELSESGPSAPPRSDGLM---AELMRRLPFELTEGQREVRDVLSDG-LAATRPLNRLL 313 Query 267 VKSQHSGN---AQVTQTKFLPNAPKALIVEPSRELAEQ----TLNNIKQFKKYIDNPK-- 317 SG A + + + + +++ P+ LA Q + + Sbjct 314 QGEVGSGKTIVAVLAMLQMIDAGYQCVLLAPTEVLAAQHLLSIRDVLGPLGMGCQLGGAE 373 Query 318 --LRELLIIGGVAARDQLSVLEN----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDE 371 + L+ G + + V + IV+GT + + + +V+DE Sbjct 374 NATQVALLTGSMTMAQKKKVRADIFSGQTGIVIGT-----HALLQDAIEFHNLGMVVVDE 428 Query 372 ADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDL 431 G +Q+ G ++V +AT V + + L Sbjct 429 QHRF---GVEQ-----RDQLRTKARTGIMPHLLVMTATPIPRTV---ALTVYGDLEMSTL 477 Query 432 KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKI 491 + + V+ V K L + P + E + + Sbjct 478 RELPRGRQPITSNVIFVKDKPGWLDRAWQRILEEVAAGRQAYVVAPRIDETEDPQKGGQN 537 Query 492 LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKP 551 + D L + +HG Sbjct 538 SRPS---------------------ETADGLYARLR------SGELANVRLALMHGRLSA 570 Query 552 HERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI-GRVGRAE 610 E+ + F+ G++ L+CT+V G+D+ ++ + + +H++ GR+GR Sbjct 571 DEKDAAMMAFRAGEIDVLVCTNVIEVGVDVPNATIMLVMDADRFGISQLHQLRGRIGRGT 630 Query 611 RMGLAI 616 L + Sbjct 631 HPSLCL 636 >sp|P0DW40|HAMB_BACCE Hachiman protein HamB OS=Bacillus cereus OX=1396 GN=hamB PE=3 SV=1 Length=1120 Score = 77.9 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 83/530 (16%), Positives = 172/530 (32%), Gaps = 87/530 (16%) Query 190 DTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNA-ELKFNFGEEEFK 248 D I ++ H+ + + L L FE + P + + K+ + K Sbjct 206 DLITLADINNEPHMWWY--FRLLYLVFEEYEDGSLWKVVPPLLDNDDISAKYIYANLYKK 263 Query 249 FPPKDGFVALSKAPDGYIVK--------SQHSGN---AQVTQTKFLPNAPKALIV--EPS 295 P + F + + DG ++K SG A+VT K L +P AL + P Sbjct 264 KPITEFFKSQRECLDGELLKNDGFVIGMPTSSGKTKVAEVTILKTLTKSPGALCIYIAPY 323 Query 296 RELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS 355 R LA + + + GG L ++++ TP + ++ Sbjct 324 RSLAN---EVEFSLSSMFEIMGYQVSQLYGGSQTSPLDRQLTKQANVIIVTPEKAKSMLR 380 Query 356 TGKLNLSQVRFLVLDEADGLLSQGYSD--FINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 + K +++ +++DE G+ + + ++ Q+++ SA L + Sbjct 381 SNKDLKDRIQLVIIDEGHL---VGFQPRYITGELLIEELKIVLKKNNGQLVLLSAVLPNI 437 Query 414 --------DVKKLSEKIMHFP------------TWVDLKGEDSVPDTVHHVVVPVNPKTD 453 + K + P V++ E P + + P K + Sbjct 438 SDFSLWIGEDDKAKRMSVWRPSSQRFGELSLARNTVNINWEGETPSYNKNFITPKLVKPE 497 Query 454 RLWERLGKSHIRTDDVHAKDNTRPGANS-------------PEMWSEAIKILKGEYAVRA 500 R+ + K + K+ A M +I+ + + Sbjct 498 RITKTGRKYAAKYFPADKKEGVAATATKMLDVGSVLIYVGRSNMVLSQARIVSKLFEEKG 557 Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFI---QQGGGPDKKGHQFSCVCLHGDRKPHE-RKQ 556 I+ ++ D L + G + + H + P E R+ Sbjct 558 IEHEWRNKN----------DWLFVELACIEEYGEDSEILSLLKQGIVPHSSKLPTEVRQS 607 Query 557 NLERFKKGDVRFLICTDVAARGIDIHGVPYVI--NVTLPDE----KQNYVHRIGRVGRAE 610 + + + +I T +G++I GV VI NV L + ++ + GR GRA Sbjct 608 IEKLMANDNPKIIIATSTLGQGVNI-GVSTVIVSNVRLDESNTVKVNDFWNIAGRAGRA- 665 Query 611 RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 + K+ Y + ++ + +++ + N + S Sbjct 666 --------FTDTEGKILYAIDRNKSQWSIYNQIQMKEMYFKYRNIEKATS 707 >sp|A0A1D5PRR9|FANCM_CHICK Fanconi anemia group M protein OS=Gallus gallus OX=9031 GN=FANCM PE=1 SV=1 Length=2041 Score = 77.9 bits (190), Expect = 2e-13, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 58/155 (37%), Gaps = 3/155 (2%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKG-HQFSCVCLHGDRKPHERKQNLERFKKGDV 566 + +IF + + + + S E+ + ++RF++G Sbjct 477 RVMIFSSFRDSVQEIAEMLSRFSPVVRVMTFVGHSTGKSTKGFTQKEQLEVVKRFREGGY 536 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 L+ T V G+DI V +I V R+GR GR R G + ++A +E+ Sbjct 537 NTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLVQRMGRTGRQ-RQGRVVVILAEGREER 595 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 Y+ S + + + + + +++ E Sbjct 596 TYNQSQSNRRSIQKA-ISGNKMLHFYQHSPRMIPE 629 Score = 37.8 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 84/231 (36%), Gaps = 23/231 (10%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSV-LENGVDIVVGT 346 K L + P++ L Q ++ + + P + GG A + + V + T Sbjct 129 KVLFLAPTKALVAQ---QMEACAQLMGIPGRDMAEMTGGTQALSRRELWASRRVFFL--T 183 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 P + + +S G +V+ LV+DEA L ++ ++ + T+ + V+ Sbjct 184 PQIMVNDLSRGTCPAVEVKCLVVDEAHKALGNHAY---CQVVKELSRYTTQFR---VLAL 237 Query 407 SATLHSFD--VKKLSEKIMHFPTWVDLKGEDSV-------PDTVHHVVVPVNPKTDRLWE 457 +AT S V+++ ++ ++L EDS V +VVP+ + + Sbjct 238 TATPGSDTKAVQQVVSNLLI--AQIELCSEDSPEIQPYSHERQVEKIVVPLGEELGGIQR 295 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 K + P + I + + +Y ++ Q Sbjct 296 AYIHVLETFAGRLIKLGVLARRDVPSLTKYQIILARDQYRKNPSPQNVGMQ 346 >sp|Q4WA22|DCL2_ASPFU Dicer-like protein 2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=dcl2 PE=3 SV=2 Length=1388 Score = 77.5 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 96/302 (32%), Gaps = 20/302 (7%) Query 376 LSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPTWVDLKGE 434 L G +I R+ + K ++ T +++ ++ H F + E Sbjct 254 LDIGDDPYIQRLRKSPLDDRALKKA---LLTGKTYCREQLRRFVDRSRHIFEELGEWAAE 310 Query 435 DSVPDTVHHVVVPV-NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 + ++ + V + W+ K+++ + A + + Sbjct 311 YYIYASIKQLRDRVRDSYMSGDWDEAEKAYLVDFLSKIPTSDIHFALNDPDGFRISPKFE 370 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK--------GHQFSCVCL 545 + + +IF + ++ + ++ + + + Sbjct 371 SLLNFLDSSDQREFSGLIFVKQRVTVSAMTSLLSVHPYTRERFRCAAYVGWSNSSASKDI 430 Query 546 HGDR--KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI 603 GD +R L+ F+ G +I TDV GID+ V+ P ++++ R Sbjct 431 LGDLLNMQLQRD-TLDDFRSGRKNLIIATDVLEEGIDLSACSVVVCYDKPPNLKSFIQRR 489 Query 604 GRVGRAERMGLAISLVATE---KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS 660 GR R ++ AI + W + + + + + + + +++ Sbjct 490 GR-ARRKQSTFAIMFPTDDTSADVSRWQDLEQAMIEAYQDDERQLQSVSALESLDEEVME 548 Query 661 EI 662 + Sbjct 549 RL 550 Score = 43.2 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 48/284 (17%), Positives = 98/284 (35%), Gaps = 27/284 (10%) Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR---DQL--SVLENGVDIVVGT 346 + P+ L Q I + P +R + G DQ + NG ++V T Sbjct 66 LAPTVALCIQQHEVIAS-----NLPAVRTRTLTGLDKVELWTDQSIWDAVLNGYRVIVST 120 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGK--RLQVI 404 L D +S G + +SQ+ L+ DEA + ++ I + P +T G +++ Sbjct 121 HAVLADALSHGFVKMSQLALLIFDEAHHCTRRHAANKIMQDFYH-PTLTKSGPAAVPRIM 179 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +A S V+ ++++ +L P ++ + L + Sbjct 180 GLTA---SPVVRSNHQELLM--VESNLDAVCRTPRLHRQELLKFTHRPH-----LQQIWY 229 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAI--IFCRTKIDCDNL 522 D + + E + I Y R K D+A+ K C Sbjct 230 TPTDPAGFRSASLTLGALYHAWENLDIGDDPYIQRLRKSPLDDRALKKALLTGKTYCREQ 289 Query 523 EQYFIQQGGGPDKKGHQFSC-VCLHGDRKPHERKQNLERFKKGD 565 + F+ + ++ +++ ++ K R + + + GD Sbjct 290 LRRFVDRSRHIFEELGEWAAEYYIYASIKQL-RDRVRDSYMSGD 332 >sp|Q31ES7|UVRB_HYDCU UvrABC system protein B OS=Hydrogenovibrio crunogenus (strain DSM 25203 / XCL-2) OX=317025 GN=uvrB PE=3 SV=1 Length=678 Score = 77.1 bits (188), Expect = 3e-13, Method: Composition-based stats. Identities = 62/385 (16%), Positives = 117/385 (30%), Gaps = 65/385 (17%) Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 P L D + L +DE+ I ++ S + L Sbjct 322 PPTLLDYLPKNALMF-------IDESHV--------TIPQIGGMYKGDRSRKENLVTFGF 366 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 +L + + P D + E +P T+ P + + + + + T Sbjct 367 ----------RLPSAMDNRPMRFD-EFEKIMPQTIFVSATPGKYEAEHESKIVEQVVRPT 415 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + RP + I+ ++ K ++ ++ TK +NL +Y Sbjct 416 GLLDPVLEVRPALTQVDDLLGEIR----------LRVEKEERVLVTTLTKRMAENLTEYL 465 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + H LH D ER + + + G+ L+ ++ G+DI V Sbjct 466 EE---------HNVRVRYLHSDIDTVERIEIIRDLRLGEFDVLVGINLLREGLDIPEVSL 516 Query 587 VINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 V + ++ + IGR R G AI + S K T Sbjct 517 VAILDADKEGFLRSDRSLIQTIGRAAR-NVAGKAILYAD--------KITKSMQKAIDET 567 Query 642 RLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSY 701 + I +N Q ++ + LN I+ + D G K A G Y Sbjct 568 ERRRAK--QIQHNTEQGITP--QKLNKKITDILEDSPYAPK--PGASAAKLKAAEADGEY 621 Query 702 KGHVDILAPTVQELAALEKEAQTSF 726 Q + +++ + + Sbjct 622 SPQEMQRMTPAQLASEIKRMEKQMY 646 >sp|Q54900|RECG_STRPN ATP-dependent DNA helicase RecG OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=recG PE=3 SV=2 Length=671 Score = 76.7 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 65/417 (16%), Positives = 140/417 (34%), Gaps = 88/417 (21%) Query 233 LKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPN------- 285 ++ + L N+ +E+ AL++A + + + + + L Sbjct 228 VQGSGLVLNWSQEKVTAVKVSLPFALTQAQEKSLQEILTDMKSDHHMNRLLQGDVGSGKT 287 Query 286 -------------APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQ 332 +A ++ P+ LAEQ +++ P L+ L+ G + A ++ Sbjct 288 VVAGLAMFAAVTAGYQAALMVPTEILAEQHFESLQNL-----FPNLKLALLTGSLKAAEK 342 Query 333 LSVLEN----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMH 388 VLE D+++GT + + +++ +++DE G R+ Sbjct 343 REVLETIAKGEADLIIGT-----HALIQDGVEYARLGLIIIDEQHRF---GVGQ--RRIL 392 Query 389 NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPV 448 + G V++ +AT + + M D+ D +P +V Sbjct 393 RE------KGDNPDVLMMTATPIPRTLAITAFGDM------DVSIIDQMPAGRKPIVTRW 440 Query 449 NPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ 508 E+L + + K + + SEA+ + + H + Sbjct 441 IKH-----EQLPQVLTWLEGEIQKGSQVYVISPLIEESEALDLKNAIALSEELTTHFAGK 495 Query 509 AIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRF 568 A LHG K E+ Q ++ FK+ Sbjct 496 A-------------------------------EVALLHGRMKSDEKDQIMQDFKERKTDI 524 Query 569 LICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI-GRVGRAERMGLAISLVATEKE 624 L+ T V G+++ +I + + +H++ GRVGR ++ A+ + + + Sbjct 525 LVSTTVIEVGVNVPNATVMIIMDADRFGLSQLHQLRGRVGRGDKQSYAVLVANPKTD 581 >sp|Q2JRR3|UVRB_SYNJA UvrABC system protein B OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=uvrB PE=3 SV=1 Length=695 Score = 76.7 bits (187), Expect = 3e-13, Method: Composition-based stats. Identities = 42/320 (13%), Positives = 108/320 (34%), Gaps = 45/320 (14%) Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 L+ G+ + + K Q + SAT ++++++ + Sbjct 360 LVDHGFRLPSALDNRPLKAEEFWAKVHQCVFVSATPGNWELEQSGAQF------------ 407 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 ++V + + V + + + + + +VH + + +L Sbjct 408 ETVVENGKTLKFYVPGTGRVIEQVIRPTGVVDPEVHVRPTAG----------QVEDLLGE 457 Query 495 EYA-VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 Y + ++ ++ I+ TK ++L +Y ++G LH + E Sbjct 458 IYLRLERSQQGLPERVIVTTLTKRMAEDLTEYLQERG---------IRVRYLHSEISSIE 508 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGR 608 R + L+ F++G L+ ++ G+D+ V V + +++ + IGR R Sbjct 509 RIEILQDFREGAFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQMIGRAAR 568 Query 609 AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNC 668 G + T + + ++ + + T I+++ N Sbjct 569 -NVRGTVVMYADTLTGSMARAIAETQRRREIQLQYNRQHNITPKPI-------IKKNSNA 620 Query 669 TISQVEPDIKVPVDEFDGKV 688 +S + K+ + + Sbjct 621 ILSFLAISRKLNSQDLEKAF 640 >sp|A6UN73|HELS_METVS ATP-dependent DNA helicase Hel308 OS=Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB) OX=406327 GN=hel308 PE=3 SV=1 Length=751 Score = 76.7 bits (187), Expect = 4e-13, Method: Composition-based stats. Identities = 58/386 (15%), Positives = 119/386 (31%), Gaps = 84/386 (22%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K L + P + LA +F+K + ++ + IG ++ LS +I++ T Sbjct 68 KGLFIVPLKALA---SEKFDEFQKKYETYGIKVGMSIGDYDTKEDLSK----YNIIITTS 120 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 +LD L+ + + V+DE + + + ++ + Q++ S Sbjct 121 EKLDSLMRHNIEWIKDLSLAVIDEIHLIGDNERGGTLEVILTKLKNI-----NAQIVGLS 175 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT+ P + + R E ++ + Sbjct 176 ATV-------------GNPEEIANWLNAKLV-----------TDEWRPVELKKGIYLENE 211 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC------DN 521 + + + + S + L ++ +IFC +K + N Sbjct 212 INYINNQDSQKKSFKAVKSISRNNLTDLIVDSVNEK---GSCLIFCNSKRNAVGESKKHN 268 Query 522 LEQYFIQQGGGPDKKGHQFSCVCL---------------------HGDRKPHERKQNLER 560 L +Y + + L H RK E Sbjct 269 LTKYLSKAELNDLNSISEEILSILETPTETCKSLSECIKKGVAFHHAGLTYQHRKAVEEG 328 Query 561 FKKGDVRFLICTDVAARGIDIH----GVPYVINV------TLPDEKQNYVHR-IGRVGRA 609 F+ ++ + CT + G+++ + + +P + +H+ IGR GR Sbjct 329 FRNKVIKVICCTPTLSAGLNLPCRRAIIRDIRRYSQNGLIDIPKLE---IHQCIGRAGRP 385 Query 610 ERM--GLAISLVATEK--EKVWYHVC 631 G I L EK EK + + Sbjct 386 GLDPYGEGIILAKNEKDVEKAFLALT 411 >sp|P51979|HFM1_YEAST ATP-dependent DNA helicase MER3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HFM1 PE=1 SV=3 Length=1187 Score = 77.1 bits (188), Expect = 4e-13, Method: Composition-based stats. Identities = 72/517 (14%), Positives = 170/517 (33%), Gaps = 69/517 (13%) Query 151 TMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEF-TMHDTIGCYLDIDKGHVK-FSKN 208 + Q S +G + + F+ G +F D D + K F + Sbjct 37 SRQPSFKVGLSYNSLLDDCDDENETEEIFEGRGLQFFDKDDNFSITADDTQVTSKLFDHD 96 Query 209 GKDLG-LAFEIPPHMKNQALFPACV---LKNAELKFNFGEEEFKFPPKDGFVALSKAPDG 264 + + P + + C+ + + F EF + F ++ ++ + Sbjct 97 LEQTPDEEAKKPKKVTIRKSAKKCLSTTILPDSFRGVFKFTEFNKMQSEAFPSIYESNEN 156 Query 265 YIVKSQHSGNAQ----------VTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYID 314 I+ S + +T N K + + P++ L + N + Sbjct 157 CIISSPTGSGKTVLFELAILRLIKETNSDTNNTKIIYIAPTKSLCYEMYKNW-----FPS 211 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ----VRFLVLD 370 L ++ + + +I++ TP + DL++ + S+ V+ +++D Sbjct 212 FVNLSVGMLTSDTSFLETEKA--KKCNIIITTPEK-WDLLTRRWSDYSRLFELVKLVLVD 268 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHF---PT 427 E + + + + ++ + + ++ + SAT+ +++ L+ + P Sbjct 269 EIHT-IKEKRGASLEVILTRMNTMC---QNIRFVALSATVP--NIEDLALWLKTNNELPA 322 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 + E + V + +++ + + ++ K N P + Sbjct 323 NILSFDESYRQVQLTKFVYGYSFNCKNDFQKDAIYNSKLIEIIEKH----ADNRPVLIFC 378 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHG 547 + A + H IF ++K C++ + Q H Sbjct 379 PTRASTISTAKFLLNNH------IFSKSKKRCNH------NPSDKILNECMQQGIAFHHA 426 Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI------NVTLPDEKQNY-- 599 +R + F G + L T A G+++ +I N E Q Y Sbjct 427 GISLEDRTAVEKEFLAGSINILCSTSTLAVGVNLPAYLVIIKGTKSWN---SSEIQEYSD 483 Query 600 ---VHRIGRVGR--AERMGLAISLVATEKEKVWYHVC 631 + IGR GR E G A+ + ++ ++ + ++ Sbjct 484 LDVLQMIGRAGRPQFETHGCAVIMTDSKMKQTYENLI 520 Score = 43.2 bits (100), Expect = 0.011, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 37/69 (54%), Gaps = 5/69 (7%) Query 9 VMPEIAQAVEEM-DWLLPTDIQAESIP-LILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 ++P+ + V + ++ Q+E+ P + + ++++ TGSGKT F + +++++ E Sbjct 125 ILPDSFRGVFKFTEFNKM---QSEAFPSIYESNENCIISSPTGSGKTVLFELAILRLIKE 181 Query 67 TLKDQQEGK 75 T D K Sbjct 182 TNSDTNNTK 190 >sp|F4HYD7|RANBM_ARATH Ran-binding protein M homolog OS=Arabidopsis thaliana OX=3702 GN=RANBPM PE=1 SV=1 Length=467 Score = 75.9 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 32/129 (25%), Positives = 60/129 (47%), Gaps = 13/129 (10%) Query 133 HYYEVSCHDQGL---CRVGWSTMQASL--DLGTDKFGFGFGGTGKKSHNKQF--DNYGEE 185 +Y+E+ D G+ +G++ + G + G+ G + Q + +G + Sbjct 100 YYFEIFVKDSGIKGQIAIGFTKESFKMRRQPGWEVNSCGYHGDDGYLYRGQGKGEPFGPK 159 Query 186 FTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVL--KNAELKFNFG 243 FT D +G ++ F+KNG +G +IP ++ LFP + +N E+ NFG Sbjct 160 FTKDDAVGGGINYASQEFFFTKNGTIVG---KIPKDIRGH-LFPTVAVHSQNEEVLVNFG 215 Query 244 EEEFKFPPK 252 +++F F K Sbjct 216 KKKFAFDIK 224 >sp|D0KN27|HELS_SACS9 ATP-dependent DNA helicase Hel308 OS=Saccharolobus solfataricus (strain 98/2) OX=555311 GN=hel308 PE=1 SV=1 Length=715 Score = 76.3 bits (186), Expect = 5e-13, Method: Composition-based stats. Identities = 63/364 (17%), Positives = 129/364 (35%), Gaps = 47/364 (13%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L N KA+ V P R L T FK + + + + G D + L+N DI Sbjct 72 LKNGGKAIYVTPLRAL---TNEKYLTFKDW-ELIGFKVAMTSGDYDTDD--AWLKN-YDI 124 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++ T +LD L L++V + VLDE L + + T KR Sbjct 125 IITTYEKLDSLWRHRPEWLNEVNYFVLDELHYLNDPERGPVVESV-------TIRAKRRN 177 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTV-------HHVVVPVNPKTDRL 455 ++ SAT+ ++ K++++ + P + + + + + V+ + T ++ Sbjct 178 LLALSATISNY--KQIAKWLGAEPVATNWRPVPLIEGVIYPERKKKEYNVIFKDNTTKKV 235 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 D + NS +M + ++ E+ + + + Sbjct 236 HGDDAIIAYTLDSLSKNGQVLVFRNSRKMAESTALKIANYMNFVSLDENALSEIL----- 290 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 D++E+ + + H R E F++ ++ ++ T Sbjct 291 -KQLDDIEEGGSDEKELLKSLISK-GVAYHHAGLSKALRDLIEEGFRQRKIKVIVATPTL 348 Query 576 ARGIDIHGVPYVI------N------VT-LPDEKQNYVHRIGRVGRAE--RMGLAISLVA 620 A G+++ +I N +P Y GR GR ++G +I +V Sbjct 349 AAGVNLPARTVIIGDIYRFNKKIAGYYDEIP--IMEYKQMSGRAGRPGFDQIGESIVVVR 406 Query 621 TEKE 624 +++ Sbjct 407 DKED 410 Score = 42.4 bits (98), Expect = 0.015, Method: Composition-based stats. Identities = 12/64 (19%), Positives = 30/64 (47%), Gaps = 1/64 (2%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVIQI 63 ++ + + + +++ Q E++ +L G +L+ + TGSGKT + +I Sbjct 11 EDLKLPSNVIEIIKKRGIKKLNPPQTEAVKKGLLEGNRLLLTSPTGSGKTLIAEMGIISF 70 Query 64 VYET 67 + + Sbjct 71 LLKN 74 >sp|Q8BGE5|FANCM_MOUSE Fanconi anemia group M protein homolog OS=Mus musculus OX=10090 GN=Fancm PE=1 SV=3 Length=2021 Score = 76.7 bits (187), Expect = 5e-13, Method: Composition-based stats. Identities = 29/140 (21%), Positives = 53/140 (38%), Gaps = 2/140 (1%) Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG-HQFSCVCLHGDRKPHERKQNLER 560 K+ + +IF + + + + +Q + E+ Q + + Sbjct 457 KKCHESRVMIFSSFRDSVEEIAEMLLQHRPVIRVMTFVGHASGKNTKGFTQKEQLQVVRQ 516 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G L+ T V G+DI V +I + R+GR GR R G + ++A Sbjct 517 FRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLIQRMGRTGRK-RQGRIVVILA 575 Query 621 TEKEKVWYHVCSSRGKGCYN 640 +E+ Y+ S K Y Sbjct 576 EGREERTYNQSQSNKKNIYK 595 Score = 40.5 bits (93), Expect = 0.083, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 79/217 (36%), Gaps = 19/217 (9%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K + + P++ L Q ++ + P+ + G A ++ + + ++ TP Sbjct 124 KVVFMAPTKPLVTQ---QMEACFHVMGIPQSHMAEMTGSTQAVNRKEIWSSR-RVLFLTP 179 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 + + ++ G + + V+ LV+DEA L + R ++ +++ S Sbjct 180 QVMVNDLTRGAVPATHVKCLVVDEAHKALGNYAYCQVVR------ELVKYTTHFRILALS 233 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPD--------TVHHVVVPVNPKTDRLWERL 459 AT D+K + + I + + PD V +VVP+ + + + Sbjct 234 AT-PGSDIKAVQQVITNLLIGKIELRSEESPDILPYSHERRVEKLVVPLGEELGAIQKTY 292 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 + N + P + I + + ++ Sbjct 293 IQILETFASSLIHRNVLMKRDIPNLTKYQIILARDQF 329 >sp|B3DLA6|DICER_XENTR Endoribonuclease Dicer OS=Xenopus tropicalis OX=8364 GN=dicer1 PE=2 SV=2 Length=1893 Score = 76.7 bits (187), Expect = 6e-13, Method: Composition-based stats. Identities = 58/330 (18%), Positives = 116/330 (35%), Gaps = 39/330 (12%) Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDD--LVST 356 A Q + YID L + L+ + L +D + T + D L+S Sbjct 237 ASQPCEIVLDCGPYIDKSGLYQRLL------NELDEALNFLIDCNISTHSKERDSTLISK 290 Query 357 GKLNLSQVRFLVL-----DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 L+ Q LVL D+ G++ + +I ++ + ++ + T+ Sbjct 291 QILSDCQTVLLVLGPWCADKVAGMMVRELQKYIKHEQEEL--------HRKFLLFTDTIL 342 Query 412 SFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHA 471 + L E+ P +D+K + ++ P + +E + + R D + Sbjct 343 -RKIHALCEEHF-SPASLDMKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYV 400 Query 472 KDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG- 530 + + + E + + + IIF + L + + G Sbjct 401 SWSDSEDDDDEDEEIEEKEKTETSFPSPFTNILCG---IIFVERRYTAVVLNRLIKEAGK 457 Query 531 GGPDKKGHQFSCVCLHG-DRKP----------HERKQNLERFKKGDVRFLICTDVAARGI 579 P+ + + HG + ++++ L +F+ + LI T + G+ Sbjct 458 QDPELAYISSNFITGHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGV 517 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 DI V+ LP E ++YV GR RA Sbjct 518 DIPKCNLVVRFDLPSEYRSYVQSKGR-ARA 546 Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats. Identities = 28/169 (17%), Positives = 59/169 (35%), Gaps = 33/169 (20%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQT------- 302 P K L A D + +SG+ + A+++ +EL+ Q Sbjct 34 PRKYQVELLEAALDHNTIVCLNSGSGKT---------FIAVLLS--KELSYQIRGDFSKN 82 Query 303 -------LNNIKQFKKYIDNPKLRELLIIGGVAARD-------QLSVLENGVD-IVVGTP 347 +N+ KQ + + + L +G + ++ + LE ++V T Sbjct 83 TKRTVFLVNSEKQVSQQVSAVRTHTDLKVGEYSDQEKTQCWAKERWYLEFETHQVLVMTC 142 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 +++ +G ++LS + LV DE + I ++ Sbjct 143 HIFLNVLKSGNVSLSNINLLVFDECHLAIQDHPYREIMKICESCQPCPR 191 >sp|Q0CWI2|MPH1_ASPTN ATP-dependent DNA helicase mph1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=mph1 PE=3 SV=2 Length=1100 Score = 76.3 bits (186), Expect = 7e-13, Method: Composition-based stats. Identities = 26/177 (15%), Positives = 60/177 (34%), Gaps = 5/177 (3%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD-RKPHERKQNLERFKKGDV 566 + +IF + + + + + + D + +++FK+G Sbjct 683 RVMIFVHFRDSAEEVARVLKRYEPMIRPQVFVGQASAKGSDGMNQKTQLGVVQKFKQGTY 742 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKV 626 ++ T + G+DI V ++ + R+GR GR R G + L+ KE+ Sbjct 743 NTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRK-RAGNIVLLLMEGKEEE 801 Query 627 WYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 Y + G +++ + + + + + DI +E Sbjct 802 SYIKAKDNYEKMQQMI---ASGTRFTFHDDKSPRILPPGVKPIVDKRHIDIPEENEE 855 Score = 36.6 bits (83), Expect = 0.97, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 37/87 (43%), Gaps = 4/87 (5%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + V P++ L Q ++ P+ + ++ G A + ++ + TP Sbjct 355 QIVFVAPTKPLVAQQVSACFGVA---GIPRSQTTMLTGEAAPGIRAQEWQDK-RVFFMTP 410 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADG 374 L + + +G + ++ LV+DEA Sbjct 411 QTLINDLKSGIADPKRIVLLVVDEAHR 437 >sp|A1C9M6|DCL2_ASPCL Dicer-like protein 2 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dcl2 PE=3 SV=1 Length=1389 Score = 76.3 bits (186), Expect = 7e-13, Method: Composition-based stats. Identities = 44/313 (14%), Positives = 91/313 (29%), Gaps = 30/313 (10%) Query 369 LDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH-FPT 427 L EA L ++ R+ + K L T +K+ ++ H F Sbjct 247 LIEAWETLDIEDDPYVKRLRKSSLDGGALEKALMT---GKTFCREQLKRFVDRSRHIFEE 303 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRL-WERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 + + + ++ H+ V W+ ++++ + S Sbjct 304 LGEWAADYYIYTSIQHLKTRVQTSYMTGDWDEAERAYLVSFLSKLPAADIQITLSDAACL 363 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQ-------------GGGP 533 L+ + +IF + + + G Sbjct 364 RISPKLEALIGFLDAMDDPEFSGLIFVKQRATVSVMTDLLAVHPRTRERFRSAAYVGWSN 423 Query 534 DKKGHQF--SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT 591 F + + +HG L+ F+ G +I TDV GIDI V+ Sbjct 424 SSGSKDFLGNLLSMHGQLS------TLDDFRSGHKNLIIATDVLEEGIDISACSVVVCYD 477 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATE---KEKVWYHVCSSRGKGCYNTRLKEDGG 648 P +++V R GR R ++ AI A + W + + + + Sbjct 478 KPPNLKSFVQRRGR-ARQKQSTYAIMFPAEDSAFDLAKWQTLEQAMIEAYQDDERHLQSA 536 Query 649 CTIWYNEMQLLSE 661 + +++ Sbjct 537 IELERVNEEVVER 549 Score = 42.0 bits (97), Expect = 0.024, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 95/285 (33%), Gaps = 34/285 (12%) Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAAR---DQL--SVLENGVDIVVGT 346 + P+ L Q I + P ++ + G +Q + V +VV T Sbjct 66 LAPTVALCTQQHKVIAS-----NLPAVQTRTLTGLDKVELWTEQAIWDAILKDVRVVVST 120 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR--LQVI 404 L D +S G + +S++ ++ DEA + + ++ I + P V+ G +++ Sbjct 121 YAVLADALSHGFMRMSRLALIIFDEAHHCMRKHAANKIMQDFYH-PTVSKFGPSAVPRIM 179 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 +A S V+ E++ F +L P ++ + + + L + L + Sbjct 180 GLTA---SPVVRSNREEL--FTIETNLDAVCKTPRAHRQELLKFSHRPE-LKQLLYEPPD 233 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII----FCRT--KID 518 + R + E ++ +++A++ FCR K Sbjct 234 PMGLQVSSQTLRALIEAWETLDIEDDPYVKRLRKSSLDGGALEKALMTGKTFCREQLKRF 293 Query 519 CDNLEQYFIQQGGG---------PDKKGHQFSCVCLHGDRKPHER 554 D F + G + + GD ER Sbjct 294 VDRSRHIFEELGEWAADYYIYTSIQHLKTRVQTSYMTGDWDEAER 338 >sp|Q8PZR7|HELS_METMA ATP-dependent DNA helicase Hel308 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=hel308 PE=3 SV=1 Length=730 Score = 75.9 bits (185), Expect = 8e-13, Method: Composition-based stats. Identities = 66/407 (16%), Positives = 139/407 (34%), Gaps = 55/407 (14%) Query 249 FPPKDGFV--ALSKAPDGYIVKSQHSGN---AQVTQTKFLPNAPKALIVEPSRELAEQTL 303 +PP+ V L + + SG A++ K + N KAL + P R LA + Sbjct 25 YPPQAEAVEKGLLEGKNLLAAIPTASGKTLLAELAMLKSVLNGGKALYIVPLRALASEKF 84 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 ++F +R + G RD+ + DI+V T + D L+ + + Sbjct 85 RRFQEFS----VLGMRVGISTGDYDRRDEGLGIN---DIIVATSEKTDSLLRNETAWMQE 137 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 + +V DE + S + +++ ++ QV+ SAT+ + D +L+ + Sbjct 138 ISVVVADEVHLIDSPDRGPTLEITLSKLRRMNPS---CQVLALSATVGNAD--ELAAWLD 192 Query 424 HFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 + + D + ++ + K + + + K+ + Sbjct 193 AELVLSEWRPTDLMEGVFYNGIFYCKDKEKPVGQPTKDEAVNLVLDTIKEGGQCLVFESS 252 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAI------IFCRTKIDCDNLEQYFIQQGGGPDKKG 537 + K AV+ ++ + + I ++ D ++ ++ G Sbjct 253 RKNCMGFAKKAVSAVKKTLSNEDRETLAGIADEIIENSETDVSSVLATCVRSGTAFH--- 309 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQ 597 H R+ F++G ++ + T A G+++ +I + Sbjct 310 --------HAGLTTPLRELVENGFREGRIKIISSTPTLAAGLNLPARRVII-----RSYR 356 Query 598 NYVHRIG-----------RVGRAERM-----GLAISLVATEKEKVWY 628 Y G GRA R G A+ L + +E V+ Sbjct 357 RYSSDSGMQPIPVLEYKQMAGRAGRPRLDPYGEAVLLAKSYEEFVFL 403 Score = 39.0 bits (89), Expect = 0.19, Method: Composition-based stats. Identities = 21/112 (19%), Positives = 39/112 (35%), Gaps = 13/112 (12%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + + EI + E L QAE++ +L G ++L A T SGKT + +++ Sbjct 4 ESLDLPDEIKRFYENSGILELYPPQAEAVEKGLLEGKNLLAAIPTASGKTLLAELAMLKS 63 Query 64 VYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSRE 115 V K L + R F++ + + + Sbjct 64 VLNGGKA------------LYIVPLRALASEKFRRFQEFSVLGMRVGISTGD 103 >sp|Q8IYD8|FANCM_HUMAN Fanconi anemia group M protein OS=Homo sapiens OX=9606 GN=FANCM PE=1 SV=2 Length=2048 Score = 76.3 bits (186), Expect = 8e-13, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 53/140 (38%), Gaps = 2/140 (1%) Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQ-QGGGPDKKGHQFSCVCLHGDRKPHERKQNLER 560 K+ + +IF + + + Q Q + E+ + +++ Sbjct 472 KKRDETRVMIFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQ 531 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 F+ G L+ T V G+DI V +I V R+GR GR R G + +++ Sbjct 532 FRDGGYNTLVSTCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRK-RQGRIVIILS 590 Query 621 TEKEKVWYHVCSSRGKGCYN 640 +E+ Y+ S + Y Sbjct 591 EGREERIYNQSQSNKRSIYK 610 Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 87/221 (39%), Gaps = 27/221 (12%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV--AARDQLSVLENGVDIVVG 345 K + + P++ L Q I+ + + P+ + G + R ++ + ++ Sbjct 136 KVVFMAPTKPLVTQ---QIEACYQVMGIPQSHMAEMTGSTQASTRKEIWCSKR---VLFL 189 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP + + +S G ++++ LV+DEA L + Y + + ++ Sbjct 190 TPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR-------IL 242 Query 405 VCSATLHSFDVKKLSEKIMHFPT-WVDLKGEDSVPDTVHH--------VVVPVNPKTDRL 455 SAT D+K + + I + ++L+ EDS PD + + ++VP+ + + Sbjct 243 ALSAT-PGSDIKAVQQVITNLLIGQIELRSEDS-PDILTYSHERKVEKLIVPLGEELAAI 300 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEY 496 + + + N + P + I + + ++ Sbjct 301 QKTYIQILESFARSLIQRNVLMRRDIPNLTKYQIILARDQF 341 >sp|Q5N870|DCL3A_ORYSJ Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica OX=39947 GN=DCL3A PE=2 SV=1 Length=1651 Score = 76.3 bits (186), Expect = 8e-13, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 11/155 (7%) Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKI 517 L ++ ++ + + + K+ + + + + +IF KI Sbjct 367 HLIDKRLQQGIDMLLNSESGCVEAAKTGYISPKLYELIQIFHSFSNSRHARCLIFVDRKI 426 Query 518 DCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD------RKPHERKQNLERFKKGDVRFLIC 571 +++ + G F+ L G P +K L+ F+ G V L Sbjct 427 TARVIDRMIKKIGHL-----AHFTVSFLTGGRSSVDALTPKMQKDTLDSFRSGKVNLLFT 481 Query 572 TDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 TDVA GI + VI LP ++YV GR Sbjct 482 TDVAEEGIHVPECSCVIRFDLPRTTRSYVQSRGRA 516 Score = 37.8 bits (86), Expect = 0.54, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 45/119 (38%), Gaps = 16/119 (13%) Query 261 APDGYIVKSQHSGNAQVTQTKFLPNAPKALI-VEPSRELAEQTLNNIK-----QFKKYID 314 A I ++ +TK NA K +I + P+ +L Q I+ + ++Y Sbjct 56 AGKTMIAVMLIKEFGKINRTK---NAGKVIIFLAPTVQLVTQQCEVIEIHTDFEVEQYYG 112 Query 315 NPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 + + G ++Q+S ++V TP + L L V ++ DE Sbjct 113 AKGVDQWT---GPRWQEQISK----YQVMVMTPQVFLQALRNAFLILDMVSLMIFDECH 164 >sp|P58174|UVRB_MYCPU UvrABC system protein B OS=Mycoplasmopsis pulmonis (strain UAB CTIP) OX=272635 GN=uvrB PE=3 SV=1 Length=657 Score = 75.6 bits (184), Expect = 9e-13, Method: Composition-based stats. Identities = 65/372 (17%), Positives = 124/372 (33%), Gaps = 56/372 (15%) Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 P L D + L +DE+ ++ +N M N D R Q +V Sbjct 319 PYTLLDYLPEEALVF-------IDESHMMV-----PQLNAMFN------GDRSRKQNLV- 359 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR- 465 + + L + + P E P ++ P + ++ +++ K IR Sbjct 360 -----DYGFR-LPSALDNRPLTFSEFEEYKFPK-IYISATPSEYEIEKADQKITKMIIRP 412 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 T + TR N E + ++ K K ++ +I TK + L +Y Sbjct 413 TGLLDPIIETRSKTNQVEDIYDELQKQKA----------KNERTLILTTTKRFSEELTRY 462 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 F ++G +H D K ER + L + +KG +I ++ GID+ V Sbjct 463 FQEKGE---------KVAYIHSDHKTFERNEILRKLRKGVYDLVIGINLLREGIDLPEVS 513 Query 586 YVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYN 640 VI + ++ + +GR R G I + + + + K Sbjct 514 LVIILDADKESFLRNTKSLIQIVGRASR-NSSGKVIFYADFVSKSMRETIEDNFEKRQIQ 572 Query 641 TRLKEDGGCTIWYNEMQLLSEIEEH-LNCTISQV---EPDIKVPVDEFDGKVTYGQKRAA 696 + ++ G + IE H +I E K + E + + +K+ Sbjct 573 IQYNKEHGIVPQTIIKDIPEPIEGHGFEHSIEYFLSNEKKSKAQLKEKEKLILDLKKQML 632 Query 697 GGGSYKGHVDIL 708 + + Sbjct 633 EASQKMNYERAI 644 >sp|A8MB76|HELS_CALMQ ATP-dependent DNA helicase Hel308 OS=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) OX=397948 GN=hel308 PE=3 SV=1 Length=756 Score = 75.6 bits (184), Expect = 9e-13, Method: Composition-based stats. Identities = 81/460 (18%), Positives = 142/460 (31%), Gaps = 48/460 (10%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP----KALIVEPSRELAEQTLNN 305 + L + +V + SG + + + N K+L+ P + LA Sbjct 29 QEEAIRAGLLNGENILMVSATASGKTLLAEVAAVNNVLVNDKKSLVAVPLKALA---FEK 85 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 + F Y +R G + D L D+++ T +LD L+ + V Sbjct 86 LNDFNTY-SELGIRVAASTGDYNSED--KWL-GSYDVIITTYEKLDSLLRLKPSWIWNVG 141 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATL-HSFDVKKLSEKIMH 424 L++DE + I + ++ Q+I SAT+ + ++ + Sbjct 142 QLIIDEIHFINDDERGPIIESIVAKL---RMLNLNPQIIGLSATIGNPEELANWLNAKLV 198 Query 425 FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM 484 W + + V VV VN R+ + T D +S Sbjct 199 KSDWRPVSLREGVYH--KGVVTYVNDGEKRISGQGDSLINLTVDTLNDGGQVLVFSSSRQ 256 Query 485 WSEAIKILKGEY----AVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 + I EY VR I + + R L + Sbjct 257 GAVRIARKLAEYICSSPVRYIDPGEAGKLAEEVRETSSSRILAEELTGLIKCGVSFH--- 313 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN----------- 589 H + R+ E F++G +R L T A G+++ ++N Sbjct 314 -----HAGLELEVRRVIEEGFRRGVLRVLASTTTLAAGVNLPARRVIVNEYRRYEPGYGF 368 Query 590 VTLPDEKQNYVHRIGRVGRAERM--GLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDG 647 + +P Y GR GR G AI +V+++ E + V K Sbjct 369 IEIP--VMEYKQMAGRAGRPGLDPYGEAIIIVSSKDEVDY--VIDKYIKSPPEYVKSNFM 424 Query 648 GCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 T + LS + TI ++ F GK Sbjct 425 NPTSL--KFHTLSAVASQYAETIDELVKFTSNTFAGFQGK 462 Score = 37.4 bits (85), Expect = 0.52, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 10/119 (8%) Query 5 SEMGVMPEIAQ-AVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVIQ 62 E+ + + + + Q E+I +L G ++LM + T SGKT + + Sbjct 4 EELPLPSLLRDFLISKRGIRTLYPPQEEAIRAGLLNGENILMVSATASGKTLLAEVAAVN 63 Query 63 IVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHG 121 V K K+ + L ++N ++ S I +W G Sbjct 64 NVLVNDK--------KSLVAVPLKALAFEKLNDFNTYSELGIRVAASTGDYNSEDKWLG 114 >sp|A1D4V5|MPH1_NEOFI ATP-dependent DNA helicase mph1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=mph1 PE=3 SV=1 Length=1111 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 37/200 (19%), Positives = 67/200 (34%), Gaps = 9/200 (5%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGG--GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + +IF + + + + + P Q S G + +++FKKG Sbjct 672 RIMIFVHFRDSAEEVVRVLKRYEPLIRPHVFVGQSSAKGSEG-MDQKTQLSIVQKFKKGT 730 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 ++ T + G+DI V ++ + R+GR GR R G + L+ KE+ Sbjct 731 YNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRK-RAGNIVLLLMQGKEE 789 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH-LNCTISQVEPDIKVPVDEF 684 Y + K Y + T + I + + + DI V + Sbjct 790 ESY----IKAKDNYEKMQQMIASGTRFTFHDDTSPRILPPGVRPVAEKRQIDIPVENTQA 845 Query 685 DGKVTYGQKRAAGGGSYKGH 704 D + R K H Sbjct 846 DLPEPRKRARPPKRPPKKFH 865 Score = 37.8 bits (86), Expect = 0.42, Method: Composition-based stats. Identities = 17/87 (20%), Positives = 38/87 (44%), Gaps = 4/87 (5%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + V P++ L Q ++ Q P+ + ++ G A + ++ + TP Sbjct 344 QIIFVAPTKPLVAQQISACFQVA---GIPRSQTTMLTGEAAPGIRAEEWKSK-RVFFMTP 399 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADG 374 L + + +G + ++ LV+DEA Sbjct 400 QTLVNDLKSGIADPKRIVLLVVDEAHR 426 >sp|Q99J87|DHX58_MOUSE ATP-dependent RNA helicase DHX58 OS=Mus musculus OX=10090 GN=Dhx58 PE=1 SV=2 Length=678 Score = 75.2 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 50/282 (18%), Positives = 86/282 (30%), Gaps = 30/282 (11%) Query 370 DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI-----------VC----SATLHSFD 414 D + D I ++ NQI Q Q +C A L Sbjct 219 DLCQRRAQDPFGDLIKKLMNQIHQQLEMPDLKQQFGTQMYEQQVVQLCKDAAEAGLQEQR 278 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 V L + + ++ + T R ++ D H Sbjct 279 VYALHLRRYNDALFIHDTVRARDALDMLQDFYDRERTTKTQMVRAESWLLKLFDDHKNVL 338 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPD 534 + A PE + ++ + IIF RT+ +L + QQ Sbjct 339 GQLAARGPENPKLE---MLERILLKQFGSPGHTRGIIFTRTRQTASSLLLWLRQQPCLQT 395 Query 535 K-------KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYV 587 G + H ++++ ++ F+ G + L+ T VA G+DI V Sbjct 396 VGIKPQMLIGAGNTSQSTH--MTQKDQQEVIQEFRDGILSLLVATSVAEEGLDIAQCNVV 453 Query 588 INVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYH 629 + L + + V GR RA + S +ATE + Sbjct 454 VRYGLLTNEISMVQARGR-ARAGQS--VYSFLATEGSREMKR 492 >sp|Q6TUI4|DICER_BOVIN Endoribonuclease Dicer OS=Bos taurus OX=9913 GN=DICER1 PE=2 SV=3 Length=1923 Score = 75.9 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 111/326 (34%), Gaps = 36/326 (11%) Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q + + D L E L++ ++ N +I V + R L+S L+ Sbjct 249 QPCEIVVDCGPFTDRSGLYERLLM----ELEEALNFINDCNISVHSKERDSTLISKQILS 304 Query 361 LSQVRFLVL-----DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV 415 + +VL D+ G++ + I ++ + ++ + T + Sbjct 305 DCRAVLVVLGPWCADKVAGMMVRELQKHIKHEQEEL--------HRKFLLFTDTFL-RKI 355 Query 416 KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNT 475 L E+ P +DLK + ++ P + +E + + R D + + Sbjct 356 HALCEEHF-SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSD 414 Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG-GGPD 534 E E K + IIF + L + + G P+ Sbjct 415 SEDDEEDEEIEEKEKPETNFPSPFTNILC----GIIFVERRYTAVVLNRLIKEAGKQDPE 470 Query 535 KKGHQFSCVCLHG-DRKP----------HERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + HG + ++++ L +F+ + LI T + G+DI Sbjct 471 LAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPK 530 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRA 609 V+ LP E ++YV GR RA Sbjct 531 CNLVVRFDLPTEYRSYVQSKGR-ARA 555 Score = 39.0 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 47/284 (17%), Positives = 90/284 (32%), Gaps = 47/284 (17%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL------ 303 P K L A D + ++G+ + A+++ ++EL+ Q Sbjct 44 PRKYQVELLEAALDHNTIVCLNTGSGKT---------FIAVLL--TKELSYQIRGDFNRN 92 Query 304 ------------NNIKQFKKYIDNPKLREL----LIIGGVAARDQLSVLENGVDIVVGTP 347 +Q + L+ L + +++ + +++ T Sbjct 93 GKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVSASWTKEKWNQEFTKHQVLIMTC 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 +++ G L+LS + LV DE + I ++ P I+ Sbjct 153 YVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSCPRILGLTASILN- 211 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH--------HVVVPVNPKTDR--LWE 457 D ++L EKI + E + V +VV P TDR L+E Sbjct 212 ---GKCDPEELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYE 268 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 RL + N + + + +IL AV + Sbjct 269 RLLMELEEALNFINDCNISVHSKERDSTLISKQILSDCRAVLVV 312 >sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dcl2 PE=3 SV=1 Length=1377 Score = 75.6 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 91/289 (31%), Gaps = 28/289 (10%) Query 404 IVCSATLHSFDVKKLSEKIMH-FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL-WERLGK 461 ++ TL + +K+ ++ H F + + + +V + + ++ + WE + Sbjct 276 LMVRKTLCNEQIKRFVDRSRHIFAELGEWAADYYICTSVEQLRTTIRDQSLTMDWEDEER 335 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 +++ + L + +IF + ++ Sbjct 336 AYLSNFLSKLPVAEVQANLADPNNFTMSPKLAALINFLDKFDDPEFSGLIFVKQRVTVSV 395 Query 522 LEQYFIQQGGGPDKKGHQFSCVCLHGDRKP---------HERKQNLERFKKGDVRFLICT 572 L + D+ G + +++ ++ F+ G ++ T Sbjct 396 LARLLSLHPQTRDRFRCAAYVGMSVGSCRQDMVGDWHNAKKQRGTMDDFRSGRKNLIVTT 455 Query 573 DVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCS 632 V GID+ V+ P ++++ R GR R ++ AI ++ Sbjct 456 SVLEEGIDVTACRVVVCFDKPANLKSFIQRRGR-ARQQKSTYAIMFSTADEHGDLRRW-- 512 Query 633 SRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 ++ E + +E + L E E V+ ++ + Sbjct 513 ---------QILEQAMVEAYQDEERRLREAE-----AQEAVDENVPEMI 547 Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 26/131 (20%), Positives = 47/131 (36%), Gaps = 16/131 (12%) Query 265 YIVKSQHSGNAQVTQTKFLPN----APKAL--IVEPSRELAEQTLNNIKQFKKYIDNPKL 318 + +G Q+ + P+ L + P+ L Q I+ P + Sbjct 33 IVAMDTGTGKTQIALLRIAHQLEGGGPRKLTWFLTPTVALCLQQYEVIRSHL-----PAV 87 Query 319 RELLIIGGVAARDQLSV-----LENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 R I G S L +VV T L + ++ G + +SQ+ L+ DEA Sbjct 88 RACTITGLDKVERWKSQYIWDELLKDKQVVVSTHAVLFEALTHGFVRISQLGLLIFDEAH 147 Query 374 GLLSQGYSDFI 384 + + ++ I Sbjct 148 HCMRRHPANMI 158 >sp|O13799|YE02_SCHPO Uncharacterized helicase C17H9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.02 PE=1 SV=1 Length=1030 Score = 75.6 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 60/435 (14%), Positives = 133/435 (31%), Gaps = 76/435 (17%) Query 236 AELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ---TKFLPNAPKALIV 292 + F + F + + + +G + + + L N + + Sbjct 118 PAKTYPFELDPF---QSTAIKCVERMESVLVSAHTSAGKTVIAEYAIAQALKNRQRVIYT 174 Query 293 EPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDD 352 P + L+ Q + ++ D L+ G V+ S L +I+ Sbjct 175 SPIKSLSNQKYREL--LSEFGD-----VGLMTGDVSINPSASCLIMTTEILRA------- 220 Query 353 LVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS 412 ++ + ++ +++ DE + + +P ++ I SATL + Sbjct 221 MLYKNSEIMHEIAWVIFDEVHYMRDKDRGVVWEETLILLPDA------IRFIFLSATLPN 274 Query 413 F-DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW---ERLGKSHIRTDD 468 + +I P V P + H + P + + K+ Sbjct 275 ALQFARWISEIHKQPCHVVYTDYRPTP--LQHFIYPQGADGIYMLVDEKNKFKTENFKKV 332 Query 469 VHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQ 528 + D++ N + + K E + + ++ D I+FC +K +C+ F + Sbjct 333 LEVLDHSTRQENYSKSSKKVKKSSSLERIINMVLSNRYDPIIVFCFSKKECEINAHQFGK 392 Query 529 QGGGPDKKGHQFSCVCLHG--DRKPHER-KQNLER------------------------- 560 + + + +R + E Sbjct 393 LDLNDTENKELVTEIFDSAINQLSEEDRGLRQFEEMRSLLLRGIGIHHSGLLPILKELVE 452 Query 561 --FKKGDVRFLICTDVAARGIDIHGVPYVI----------NVTLPDEKQNYVHRIGRVGR 608 F++G VR L T+ + G+++ V+ N + Y+ GR GR Sbjct 453 ILFQEGLVRILFATETFSIGLNMPA-RTVLFTKAQKFSGNNFRWLTSGE-YMQMSGRAGR 510 Query 609 AE--RMGLAISLVAT 621 GL+I ++ Sbjct 511 RGIDTKGLSIVILDQ 525 >sp|A2Q8R2|MPH1_ASPNC ATP-dependent DNA helicase mph1 OS=Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513) OX=425011 GN=mph1 PE=3 SV=2 Length=1124 Score = 75.6 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 79/226 (35%), Gaps = 11/226 (5%) Query 501 IKEHKMDQAIIFCRTKIDCDNLEQYFIQQGG--GPDKKGHQFSCVCLHGDRKPHERKQNL 558 K+ + +IF + + + + + P Q S G + + Sbjct 687 NKDQPATRVMIFVHFRDSAEEVTRVLKRYEPMIRPHVFVGQSSAKGSEG-MGQKTQLDIV 745 Query 559 ERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISL 618 ++FKKG ++ T + G+DI V ++ + R+GR GR R G L Sbjct 746 QKFKKGTYNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRK-RSGKITLL 804 Query 619 VATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEM--QLLSEIEEHLNCTISQVEPD 676 + KE+ Y ++ ++ G ++++M ++L + ++ Sbjct 805 LMQGKEEESY--IKAKDNYEKMQQMIASGTRFTFHDDMSPRILPPGVRPV-ADKRAIDIP 861 Query 677 IKVPVDEFDGKVTYGQ--KRAAGGGSYKGHVDILAPTVQELAALEK 720 + V + G+ KR +V+ T LA K Sbjct 862 EENTVRDLPEPKRRGRAPKRPPKKFHMPDNVETGFTTASHLAGTSK 907 Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 37/87 (43%), Gaps = 4/87 (5%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + V P++ L Q ++ + P+ + ++ G A + + + TP Sbjct 366 QIVFVAPTKPLVAQQISACFEVA---GIPRSQTTMLTGEAAPGIRAEEWKAK-RVFFMTP 421 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADG 374 L + + TG + ++ +V+DEA Sbjct 422 QTLINDLKTGIADPKRIVLVVVDEAHR 448 >sp|Q75AA7|MPH1_EREGS ATP-dependent DNA helicase MPH1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=MPH1 PE=3 SV=2 Length=1077 Score = 75.6 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 38/227 (17%), Positives = 76/227 (33%), Gaps = 8/227 (4%) Query 413 FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAK 472 ++ K + P+++ V D + + R+ + V Sbjct 415 KNITKTCQAYTANPSFLGHGKLYRVRDELSTFFASAGDDS-RVIIFTELRESALELVKCV 473 Query 473 DNTRPGANSPEMWSEAIKILKGEYAVRAIKEH------KMDQAIIFCRTKIDCDNLEQYF 526 DN P ++ K + +++H K+D+ K D + Sbjct 474 DNMNDRFIRPHIFIGQAKGKESFDDGEYLRKHAPKGRKKVDRIRRLEEEKRLADEKLRKK 533 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 ++ + S ++K+ + FKKGD L+CT + G+DI V Sbjct 534 EEEKLARTARRTGSSEEAQISGMTQKQQKEVISLFKKGDYNVLVCTSIGEEGLDIGEVDM 593 Query 587 VINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS 633 +I + R+GR GR R G + L++ + + + Sbjct 594 IICYDTTSSPIKNIQRMGRTGRK-RDGRIVLLLSDNEPRKFEQAMED 639 Score = 41.3 bits (95), Expect = 0.038, Method: Composition-based stats. Identities = 31/183 (17%), Positives = 72/183 (39%), Gaps = 20/183 (11%) Query 286 APKALIVEPSREL-AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 K + P+R L A+Q + ++ + L+ R+Q+ + + Sbjct 135 GTKIIFTAPTRPLVAQQIKACLGITGIPYNDTAI---LLDKSRKHREQIWSEKR---VFF 188 Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP +++ + G LN V LV+DEA + + ++ +V+ Sbjct 189 ATPQVVENDLKRGALNPKDVVLLVIDEAHRARGSYAYVELTKFIDRF------NTSYRVL 242 Query 405 VCSATLHS--FDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-----HVVVPVNPKTDRLWE 457 +AT + V+++ + + + + + + + V+VP+ P+ + + E Sbjct 243 ALTATPATDLEGVQEVVDNLQISKIELRTEESEDIVRYMKRRDTEEVIVPLIPEIEDIIE 302 Query 458 RLG 460 +LG Sbjct 303 QLG 305 >sp|Q9BYX4|IFIH1_HUMAN Interferon-induced helicase C domain-containing protein 1 OS=Homo sapiens OX=9606 GN=IFIH1 PE=1 SV=3 Length=1025 Score = 75.6 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 75/215 (35%), Gaps = 16/215 (7%) Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDN 521 + T + A +PE +E + L+ + + + + IIF +T+ Sbjct 674 RFLMTLFFENNKMLKRLAENPEYENEKLTKLRNTIMEQYTRTEESARGIIFTKTRQSAYA 733 Query 522 LEQYFIQQGGGPDKKGHQFSCV-CLHGD----RKPHERKQNLERFKKGDVRFLICTDVAA 576 L Q+ + + + H +E+K+ + +F+ G + LI T VA Sbjct 734 LSQWITENEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAE 793 Query 577 RGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAE--------RMGLAISLVATEKEKVWY 628 G+DI VI L + V GR RA+ G + + E + Sbjct 794 EGLDIKECNIVIRYGLVTNEIAMVQARGR-ARADESTYVLVAHSGSGV--IEHETVNDFR 850 Query 629 HVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE 663 + C E+ I +MQ + E + Sbjct 851 EKMMYKAIHCVQNMKPEEYAHKILELQMQSIMEKK 885 Score = 37.0 bits (84), Expect = 0.78, Method: Composition-based stats. Identities = 13/49 (27%), Positives = 20/49 (41%), Gaps = 0/49 (0%) Query 27 DIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGK 75 Q E L G ++++ TGSGKT + + K + GK Sbjct 310 PYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGK 358 >sp|Q23223|MTR4_CAEEL mRNA transport homolog 4 OS=Caenorhabditis elegans OX=6239 GN=mtr-4 PE=3 SV=1 Length=1026 Score = 75.6 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 69/447 (15%), Positives = 131/447 (29%), Gaps = 87/447 (19%) Query 236 AELKFNFGEEEFKF-------PPKDGFVALSKAPDGYIVKSQHSGN---AQVTQTKFLPN 285 AEL+ N G E K+ K + + + +G A K L Sbjct 108 AELRENSGTEPAKYYPFQLDAFQKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLRE 167 Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 + + P + L+ Q +++ K L+ G V S L +I Sbjct 168 KQRVIYTSPIKALSNQKYRELEEEFK-------DVGLMTGDVTLNPDASCLVMTTEI--- 217 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQG----YSDFINRMHNQIPQVTSDGKRL 401 L ++ G + +V ++V DE + + + + I M I Q Sbjct 218 ----LRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGVVWEETIILMSKNIKQA------- 266 Query 402 QVIVCSATLHS-FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 SAT+ + + I P V++ D P + H + PV + + Sbjct 267 ---FLSATIPNARQFAQWVASIKQQP--VNVVYTDYRPTPLQHWIYPVGGEGMYEVVNVK 321 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIK------ILKGEYAVRAIKEHKMDQAIIFCR 514 A +S +++ +R++ + I+F Sbjct 322 GEFREDKFRDAMSGLATAGDSAGSFNKRRTGGGTQGDSNVLKIIRSVASNDGLNCIVFSF 381 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL----------------------------- 545 ++ +C++ D + V Sbjct 382 SRKECESYAISLKDMDFNKDHEKGMVKSVYESAIAQLSPEDQKLPQILNILPLLRRGIGV 441 Query 546 -HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN----VTLPDE----K 596 H P ++ F +G V+ L T+ + G+++ V D Sbjct 442 HHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITS 501 Query 597 QNYVHRIGRVGRAER--MGLAISLVAT 621 Y+ GR GR + G I +V + Sbjct 502 GEYIQMAGRAGRRGKDDRGTVILMVDS 528 >sp|D3Z4R1|HFM1_MOUSE Probable ATP-dependent DNA helicase HFM1 OS=Mus musculus OX=10090 GN=Hfm1 PE=3 SV=2 Length=1434 Score = 75.6 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 69/468 (15%), Positives = 144/468 (31%), Gaps = 70/468 (15%) Query 247 FKFPPKDGFVALSKAPDGYIV-KSQHSGN---AQVTQTKFLPNAP------KALIVEPSR 296 F + F L +++ SG ++ T+ L P K + + P + Sbjct 280 FNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWLNMKIVYMAPIK 339 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVS- 355 L Q ++ K+ K+ L + G D + +I++ TP + D + Sbjct 340 ALCSQRFDDWKE--KF-GPVGLNCKELTGDTVMDDLFEI--QHANIIITTPEKWDSVTRK 394 Query 356 -TGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD 414 + VR ++DE + + + + +++ V S + + SA Sbjct 395 WRDNSFIQLVRLFLIDEVHVIKDENRGPTLEVVVSRMKTVQSLSRD----LESA------ 444 Query 415 VKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDN 474 P V + + + +R L K Sbjct 445 ----------SPVPVRFVAVSATIPNAEDIAEWL-SDGERPAVCLKMDESHRPVKLQKVV 493 Query 475 TRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD-------------- 520 +S + + L + ++FC T+ Sbjct 494 LGFPCSSSQTEFKFDLALNYKVYSVIRTYSDQKPTLVFCSTRKGVQQAASVLVKDAKFII 553 Query 521 NLEQYFIQQGGGPDKKGHQ------FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 ++EQ Q + + + H + +RK F GD+ L T Sbjct 554 SVEQKLRLQKSAYSIRDSKLKDTLVYGVGYHHAGMELSDRKLVEGLFTSGDLPVLFTTST 613 Query 575 AARGIDIHGVPYVINVTLPDE---KQNY-----VHRIGRVGR--AERMGLAISL--VATE 622 A G+++ VI T+ + Y + IGR GR + A+ + ++T Sbjct 614 LAMGMNMPAHLVVIKSTMHYSGGVFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTR 673 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 ++ V C+ + + L E I + + ++ + + T+ Sbjct 674 EKYVQMLACNDTVESSLHRHLIEHLNAEIVLHTITDVNIALDWIRSTM 721 Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (3%) Query 28 IQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 IQ+++ +L + ++ A TGSGKT F + + +++ E Sbjct 283 IQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLME 322 >sp|A0MQH0|DICER_CRIGR Endoribonuclease Dicer OS=Cricetulus griseus OX=10029 GN=DICER1 PE=2 SV=3 Length=1917 Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 59/328 (18%), Positives = 115/328 (35%), Gaps = 36/328 (11%) Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK 358 A Q + + D L E L++ ++ N ++ V + R L+S Sbjct 247 ASQPCEIVVDCGPFTDRSGLYERLLM----ELEEAINFINDCNVSVHSKERDSTLISKQI 302 Query 359 LNLSQVRFLVL-----DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 L+ + +VL D+ G++ + +I ++ + ++ + TL Sbjct 303 LSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEEL--------HRKFLLFTDTLL-R 353 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 + L E+ P +DLK + ++ P + +E + + R D + Sbjct 354 KIHALCEEHF-SPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSW 412 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG-GG 532 + + E E K + IIF + L + + G Sbjct 413 SDSEDDDDDEEIEEKEKPETNFPSPFTNILC----GIIFVERRYTAVVLNRLIKEAGKQD 468 Query 533 PDKKGHQFSCVCLHG-DRKP----------HERKQNLERFKKGDVRFLICTDVAARGIDI 581 P+ + + HG + ++++ L +F+ + LI T V G+DI Sbjct 469 PELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDI 528 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRA 609 V+ LP E ++YV GR RA Sbjct 529 PKCNLVVRFDLPTEYRSYVQSKGR-ARA 555 Score = 40.9 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 49/284 (17%), Positives = 90/284 (32%), Gaps = 47/284 (17%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL------ 303 P K L A D + ++G+ + A+++ ++ELA Q Sbjct 44 PRKYQVELLEAALDHNTIVCLNTGSGKT---------FIAVLL--TKELAHQIRGDLNPR 92 Query 304 ------------NNIKQFKKYIDNPKLREL----LIIGGVAARDQLSVLENGVDIVVGTP 347 +Q + L+ L + +++ S +++ T Sbjct 93 AKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTC 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 +++ G L+LS + LV DE + I ++ P I+ Sbjct 153 YVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCESCPSCPRILGLTASILN- 211 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH--------HVVVPVNPKTDR--LWE 457 D ++L EKI + E + V +VV P TDR L+E Sbjct 212 ---GKCDPEELEEKIQKLEKILKSNAETATDLVVLDRYASQPCEIVVDCGPFTDRSGLYE 268 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 RL + N + + + +IL AV + Sbjct 269 RLLMELEEAINFINDCNVSVHSKERDSTLISKQILSDCRAVLVV 312 >sp|P56996|UVRB_NEIMA UvrABC system protein B OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=uvrB PE=3 SV=1 Length=675 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 60/315 (19%), Positives = 108/315 (34%), Gaps = 53/315 (17%) Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E +P TV P + + + + + T V + RP A + I Sbjct 389 EKVMPQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEIND-- 446 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + K ++ ++ TK + L Y+ + G LH D E Sbjct 447 --------RIQKGERVLVTTLTKRMAEQLTDYYSELG---------IKVRYLHSDIDTVE 489 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV--HR-----IGRV 606 R + + + G L+ ++ G+DI V V + +K+ ++ HR IGR Sbjct 490 RVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILD--ADKEGFLRSHRSLIQTIGRA 547 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE--E 664 R G+AI Y ++ + I E + +I+ E Sbjct 548 AR-NVNGVAI---------------------LYADKITDSMKAAIDETERRREKQIKFNE 585 Query 665 HLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYK-GHVDILAPTVQELAALEKEAQ 723 Q++ +K +D + G+ R G K G + ++E+A LEK Q Sbjct 586 EHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKVGEIHNEEDAIKEIAKLEKAMQ 645 Query 724 TSFLHLGYLPNQLFR 738 + L + + R Sbjct 646 QAARDLQFEEAAVLR 660 >sp|Q25BN1|DICER_CHICK Endoribonuclease Dicer OS=Gallus gallus OX=9031 GN=DICER1 PE=2 SV=3 Length=1921 Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 59/328 (18%), Positives = 111/328 (34%), Gaps = 40/328 (12%) Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE--NGVDIVVGTPGRLDDLVSTGK 358 Q + Y D L G R+ L N +I V + R L+S Sbjct 249 QPCEIVVDCGPYTDKSGLY------GRLLRELDEALHFLNDCNISVHSKERDSTLISKQI 302 Query 359 LNLSQVRFLVL-----DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 L+ + +VL D+ G++ + +I ++ + ++ + T Sbjct 303 LSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEEL--------HRKFLLFTDTFL-R 353 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 + L E+ P +DLK + ++ P + +E + + R D + Sbjct 354 KIHALCEEHF-SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSW 412 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG-GG 532 + + E E K + IIF + L + + G Sbjct 413 SDSEDDDEDEEIEEKEKPETNFPSPFTNILC----GIIFVERRYTAVVLNRLIKEAGKQD 468 Query 533 PDKKGHQFSCVCLHG-DRKP----------HERKQNLERFKKGDVRFLICTDVAARGIDI 581 P+ + + HG + ++++ L +F+ + LI T + G+DI Sbjct 469 PELAYISSNFITGHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDI 528 Query 582 HGVPYVINVTLPDEKQNYVHRIGRVGRA 609 V+ LP E ++YV GR RA Sbjct 529 PKCNLVVRFDLPTEYRSYVQSKGR-ARA 555 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 27/169 (16%), Positives = 52/169 (31%), Gaps = 33/169 (20%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 P K L A D + ++G+ + A+++ ++EL+ Q + + Sbjct 44 PRKYQVELLEAALDHNTIVCLNTGSGKT---------FIAVLL--TKELSYQIRGDFNKN 92 Query 310 KKYIDNPKLRELLIIGGVAARDQLSVLENGV----------------------DIVVGTP 347 K + V+A S L+ G ++V T Sbjct 93 GKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTC 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 ++ L+LS + LV DE + I ++ P Sbjct 153 HVALTVLRNEYLSLSNINLLVFDECHLAIQDHPYREIMKICEDYPSCPR 201 >sp|Q09884|DCR1_SCHPO Protein Dicer OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dcr1 PE=1 SV=1 Length=1374 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 41/198 (21%), Positives = 66/198 (33%), Gaps = 17/198 (9%) Query 448 VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD 507 ++ + +RL + DN E ++ Sbjct 303 LSDDEELAIDRLKIFVEDWKNNKYSDNGPRIPVFDSTDVTDKVFKLLELLKATYRKSDSV 362 Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE------RKQ-NLER 560 + +IF K L F++ P+ + H F HG E R++ L + Sbjct 363 RTVIFVERKATAFTLS-LFMKTLNLPNIRAHSFIG---HGPSDQGEFSMTFRRQKDTLHK 418 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVA 620 FK G LI T VA GID+ VI + YV GR RA I + Sbjct 419 FKTGKYNVLIATAVAEEGIDVPSCNLVIRFNICRTVTQYVQSRGR-ARAMASKFLI-FLN 476 Query 621 TEK----EKVWYHVCSSR 634 TE+ E++ + + + Sbjct 477 TEELLIHERILHEEKNLK 494 >sp|A1CS00|MPH1_ASPCL ATP-dependent DNA helicase mph1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=mph1 PE=3 SV=1 Length=1119 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 36/181 (20%), Positives = 65/181 (36%), Gaps = 9/181 (5%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGG--GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + ++F + + + + + P Q S G + +++FKKGD Sbjct 679 RIMVFAHFRDSAEEIVRVLKRYEPLIRPHVFVGQSSAKGSEG-MDQKTQLSIVQKFKKGD 737 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 ++ T + G+DI V ++ + R+GR GR R G + L+ KE+ Sbjct 738 YNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRK-RAGNIVLLLMQGKEE 796 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH-LNCTISQVEPDIKVPVDEF 684 Y R K Y + T + I + T + + DI V + Sbjct 797 ESY----IRAKDNYEKMQEMIASGTRFAFHDDTSPRILPPGIRPTADKKQIDIPVENTQA 852 Query 685 D 685 D Sbjct 853 D 853 Score = 37.4 bits (85), Expect = 0.68, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 4/87 (5%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + V P++ L Q ++ P+ + ++ G A + + + TP Sbjct 351 QIIFVAPTKPLVSQQISACFGIA---GIPRSQTTMLTGEAAPGIRAEEWKAK-RVFFMTP 406 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADG 374 L + + +G + ++ LV+DEA Sbjct 407 QTLINDLKSGIADPKRIVLLVVDEAHR 433 >sp|P47047|MTR4_YEAST ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MTR4 PE=1 SV=1 Length=1073 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 81/554 (15%), Positives = 169/554 (31%), Gaps = 105/554 (19%) Query 235 NAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ---TKFLPNAPKALI 291 N + F + F + + + +G V + + L N + + Sbjct 141 NEARTYPFTLDPF---QDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIY 197 Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 P + L+ Q + ++ D L+ G + L +I L Sbjct 198 TSPIKALSNQKYREL--LAEFGD-----VGLMTGDITINPDAGCLVMTTEI-------LR 243 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLH 411 ++ G + +V +++ DE + + +P +++ + SAT+ Sbjct 244 SMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILLPD------KVRYVFLSATIP 297 Query 412 S-FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVP---------VNPKTDRLWERLGK 461 + + + KI P + P + H + P V+ K+ E K Sbjct 298 NAMEFAEWICKIHSQPCHIVYTNFRPTP--LQHYLFPAHGDGIYLVVDEKSTFREENFQK 355 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE------YAVRAIKEHKMDQAIIFCRT 515 + + D + + + KG+ V+ I + K + I+F + Sbjct 356 AMASISNQIGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIWKKKYNPVIVFSFS 415 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQFS-----CVCL------------------------- 545 K DC+ L + D + + + L Sbjct 416 KRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIKHILPLLRRGIGIH 475 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI---------NVTLPDEK 596 H P ++ F++G ++ L T+ + G+++ V Sbjct 476 HSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGG 535 Query 597 QNYVHRIGRVGRAE--RMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 + Y+ GR GR G+ I ++ EK+ V KG + D + YN Sbjct 536 E-YIQMSGRAGRRGLDDRGIVIMMI---DEKMEPQVAKGMVKGQADRL---DSAFHLGYN 588 Query 655 EMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYG-----QKRAAGGGSYKGHVDILA 709 + L +E + P+ + F + +K A + G Sbjct 589 MILNLMRVE--------GISPEFMLEHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDE 640 Query 710 PTVQELAALEKEAQ 723 V+E +E+ + Sbjct 641 ENVKEYHEIEQAIK 654 >sp|Q6TV19|DICER_DANRE Endoribonuclease Dicer OS=Danio rerio OX=7955 GN=dicer1 PE=2 SV=2 Length=1865 Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 66/378 (17%), Positives = 127/378 (34%), Gaps = 41/378 (11%) Query 299 AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGK 358 A Q + +Y D L E L+ D+ N ++ V R +S Sbjct 233 ASQPREEVLDCGQYQDQSGLSERLL----NELDEALNFLNDCNLSVHREDRDPTFISKQV 288 Query 359 LNLSQVRFLVL-----DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSF 413 LN + VL D+A G++ + +I ++ + ++ + T+ Sbjct 289 LNDCRAVLTVLGPWCADKAAGIMVRELQKYIKHEQEEL--------NRKFLLFTDTIL-R 339 Query 414 DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKD 473 + L E+ P +DLK + ++ P + +E + + R D + Sbjct 340 KIHALCEEHF-SPASLDLKFVTPKVIRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSW 398 Query 474 NTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGP 533 + + E K + IIF + L + I++ G Sbjct 399 SDSEDDDEDEEAEAKEKTEANFPSPFTNILC----GIIFVERRYTAVVLNR-LIKEAGKQ 453 Query 534 DKKGHQFSCVCLHG---DRKP----------HERKQNLERFKKGDVRFLICTDVAARGID 580 D + S + G + ++++ L +F+ + LI T + G+D Sbjct 454 DPELAYISSNFITGHSIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVD 513 Query 581 IHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSS--RGKGC 638 I V+ LP E ++YV GR RA I L +E+ K + + + Sbjct 514 IPKCNLVVRFDLPTEYRSYVQSKGR-ARAPVSNY-IMLADSERTKTFQEDLKTYKAIEKI 571 Query 639 YNTRLKEDGGCTIWYNEM 656 + + C + E Sbjct 572 LRNKCSKSAECNDFELEP 589 Score = 39.3 bits (90), Expect = 0.15, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 0/56 (0%) Query 341 DIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 ++V T ++ G L LS++ LV DE ++ I ++ P Sbjct 132 QVLVMTCHIFLHVLKNGVLPLSKINLLVFDECHLAITGHPYREIMKICEGCPSCPR 187 >sp|Q12WZ6|HELS_METBU ATP-dependent DNA helicase Hel308 OS=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) OX=259564 GN=hel308 PE=3 SV=1 Length=760 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 69/420 (16%), Positives = 132/420 (31%), Gaps = 89/420 (21%) Query 249 FPPKDGF--VALSKAPDGYIVKSQHSGN---AQVTQTKFLPNAPKALIVEPSRELAEQTL 303 +PP+ + L + + SG A++ K + KAL + P R LA + Sbjct 25 YPPQAEAIEMGLLEKKNLLAAIPTASGKTLLAELAMIKAIREGGKALYIVPLRALASEKF 84 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 K+ + ++ + G + +R + DI+V T + D L+ G + + Sbjct 85 ERFKELAPF----GIKVGISTGDLDSRADWLGVN---DIIVATSEKTDSLLRNGTSWMDE 137 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 + +V+DE L S+ + ++ ++ D +QV+ SAT Sbjct 138 ITTVVVDEIHLLDSKNRGPTLEVTITKLMRLNPD---VQVVALSAT-------------- 180 Query 424 HFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 V D L L S R D+H N P Sbjct 181 ---------------------VGNAREMADWLGAALVLSEWRPTDLHEGVLFGDAINFPG 219 Query 484 MWSEAIKILKGEYAVRAIKEHKMD-QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 + ++ K + + K + Q ++F ++ +C + + Sbjct 220 SQKKIDRLEKDDAVNLVLDTIKAEGQCLVFESSRRNCAGFAKTASSKVAKILDNDIMIKL 279 Query 543 VCL---------------------------HGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + H + RK F++ ++ + T Sbjct 280 AGIAEEVESTGETDTAIVLANCIRKGVAFHHAGLNSNHRKLVENGFRQNLIKVISSTPTL 339 Query 576 ARGIDIHGVPYVI--------NVTL-PDEKQNYVHRIGRVGR--AERMGLAISLVATEKE 624 A G+++ +I N + P Y GR GR + G ++ L T E Sbjct 340 AAGLNLPARRVIIRSYRRFDSNFGMQPIPVLEYKQMAGRAGRPHLDPYGESVLLAKTYDE 399 >sp|Q50939|UVRB_NEIGO UvrABC system protein B OS=Neisseria gonorrhoeae OX=485 GN=uvrB PE=3 SV=1 Length=675 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 59/315 (19%), Positives = 108/315 (34%), Gaps = 53/315 (17%) Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E +P TV P + + + + + T V + RP A + I Sbjct 389 EKVMPQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEIND-- 446 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + K ++ ++ TK + L Y+ + G LH D E Sbjct 447 --------RIQKGERVLVTTLTKRMAEQLTDYYSELG---------IKVRYLHSDIDTVE 489 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV--HR-----IGRV 606 R + + + G L+ ++ G+DI V V + +K+ ++ HR IGR Sbjct 490 RVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILD--ADKEGFLRSHRSLIQTIGRA 547 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE--E 664 R G+AI Y ++ + + E + +I+ E Sbjct 548 AR-NVNGVAI---------------------LYADKITDSMKAAVDETERRREKQIKFNE 585 Query 665 HLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYK-GHVDILAPTVQELAALEKEAQ 723 Q++ +K +D + G+ R G K G + ++E+A LEK Q Sbjct 586 EHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKVGEIHNEEDAIKEIAKLEKAMQ 645 Query 724 TSFLHLGYLPNQLFR 738 + L + + R Sbjct 646 QAARDLQFEEAAVLR 660 >sp|Q9UPY3|DICER_HUMAN Endoribonuclease Dicer OS=Homo sapiens OX=9606 GN=DICER1 PE=1 SV=3 Length=1922 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 57/326 (17%), Positives = 113/326 (35%), Gaps = 36/326 (11%) Query 301 QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLN 360 Q + + D L E L++ ++ N +I V + R L+S L+ Sbjct 249 QPCEIVVDCGPFTDRSGLYERLLM----ELEEALNFINDCNISVHSKERDSTLISKQILS 304 Query 361 LSQVRFLVL-----DEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDV 415 + +VL D+ G++ + +I ++ + ++ + T + Sbjct 305 DCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEEL--------HRKFLLFTDTFL-RKI 355 Query 416 KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNT 475 L E+ P +DLK + ++ P + +E + + R D + + Sbjct 356 HALCEEHF-SPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSD 414 Query 476 RPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQG-GGPD 534 + E E K + IIF + L + + G P+ Sbjct 415 SEDDDEDEEIEEKEKPETNFPSPFTNILC----GIIFVERRYTAVVLNRLIKEAGKQDPE 470 Query 535 KKGHQFSCVCLHG-DRKP----------HERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + HG + ++++ L +F+ + LI T + G+DI Sbjct 471 LAYISSNFITGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPK 530 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRA 609 V+ LP E ++YV GR RA Sbjct 531 CNLVVRFDLPTEYRSYVQSKGR-ARA 555 Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 51/284 (18%), Positives = 92/284 (32%), Gaps = 47/284 (17%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 P K L A D + ++G+ + A+++ ++EL+ Q + + Sbjct 44 PRKYQVELLEAALDHNTIVCLNTGSGKT---------FIAVLL--TKELSYQIRGDFSRN 92 Query 310 KK---YIDNPKLRELLIIGGVAARDQLSV-----LENGV--------------DIVVGTP 347 K ++ N + + V L V LE +++ T Sbjct 93 GKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWNQEFTKHQVLIMTC 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 +++ G L+LS + LV DE + I ++ P I+ Sbjct 153 YVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCENCPSCPRILGLTASILN- 211 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH--------HVVVPVNPKTDR--LWE 457 D ++L EKI + E + V +VV P TDR L+E Sbjct 212 ---GKCDPEELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYE 268 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 RL + N + + + +IL AV + Sbjct 269 RLLMELEEALNFINDCNISVHSKERDSTLISKQILSDCRAVLVV 312 >sp|Q9XIF2|MTR4_ARATH DExH-box ATP-dependent RNA helicase DExH9 OS=Arabidopsis thaliana OX=3702 GN=MTR4 PE=2 SV=1 Length=988 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 90/574 (16%), Positives = 164/574 (29%), Gaps = 95/574 (17%) Query 226 ALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQ---TKF 282 L P+ K F F + F + L + +G V Sbjct 50 PLAPSVHNKPPAKDFPFTLDSF---QSEAIKCLDNGESVMVSAHTSAGKTVVASYAIAMS 106 Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L + + P + L+ Q + K+ ++ D L+ G V S L +I Sbjct 107 LKENQRVIYTSPIKALSNQKYRDFKE--EFSD-----VGLMTGDVTIDPNASCLVMTTEI 159 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 L + G + +V +++ DE + + K + Sbjct 160 -------LRSMQYKGSEIMREVAWIIFDEVHYMRDSERGVVWEE------SIVMAPKNSR 206 Query 403 VIVCSATLHS-FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGK 461 + SAT+ + + K+ P + P + H V P L K Sbjct 207 FVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTP--LQHYVFPAGGNGLYLVVD-EK 263 Query 462 SHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGE------------YAVRAIKEHKMDQA 509 S D N N + + K KG V+ I + + D Sbjct 264 SKFHEDSFQKSLNALVPTNESDKKRDNGKFQKGLVIGKLGEESDIFKLVKMIIQRQYDPV 323 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL------------------------ 545 I+F +K +C+ L + D + + Sbjct 324 ILFSFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDKKLPQVSNILPILK 383 Query 546 ------HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN----VTLPD- 594 H P ++ F++G ++ L T+ + G+++ V Sbjct 384 RGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKF 443 Query 595 ---EKQNYVHRIGRVGRAE--RMGLAISLVATEKE--------KVWYHVCSSRGKGCYNT 641 Y+ GR GR + G+ I +V + E K +S YN Sbjct 444 RWLSSGEYIQMSGRAGRRGIDKRGICILMVDEKMEPAVAKSMLKGSADSLNSAFHLSYNM 503 Query 642 RLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSY 701 L + + S + + I +E IK +E D V ++ + Sbjct 504 LLNQLRCEEGDPENLLRNSFFQFQADRAIPDLEKQIKSLEEERDSLVIEEEESLKNYYNL 563 Query 702 KGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQ 735 L ++E+ K + LPN+ Sbjct 564 ILQYKSLKKDIREIVFTPK-----YCLPFLLPNR 592 >sp|O34942|RECG_BACSU ATP-dependent DNA helicase RecG OS=Bacillus subtilis (strain 168) OX=224308 GN=recG PE=3 SV=1 Length=682 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 71/466 (15%), Positives = 139/466 (30%), Gaps = 93/466 (20%) Query 222 MKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTK 281 +K QA A + ++ F EE K L+ A + + ++ + Sbjct 221 LKMQAFRKAEREQTQGIRQRFSNEELMRFIKSLPFPLTNAQSRVLREITADMSSPYRMNR 280 Query 282 FLP--------------------NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLREL 321 L + + ++ P+ LAEQ + + + Sbjct 281 LLQGDVGSGKTAVAAIALYAAILSGYQGALMVPTEILAEQ---HADSLVSLFEKWDVSVA 337 Query 322 LIIGGVAARDQLSVLEN----GVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLS 377 L+ V + + +LE +DI+VGT + ++ + ++ DE Sbjct 338 LLTSSVKGKRRKELLERLAAGEIDILVGT-----HALIQDEVEFKALSLVITDEQHRFG- 391 Query 378 QGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSV 437 Q ++ + G+ V+ +AT Sbjct 392 ----------VEQRKKLRNKGQDPDVLFMTAT---------------------------- 413 Query 438 PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 + L + DV D G E + +L A Sbjct 414 ----------------PIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVKHDMLDRILA 457 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLE--QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 + + QA I C + D L+ D +++ +HG E+ Sbjct 458 FVEKELKQGRQAYIICPLIEESDKLDVQNAIDVYNMLSDIFRGKWNVGLMHGKLHSDEKD 517 Query 556 QNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI-GRVGRAERMGL 614 Q + F + L+ T V G+++ ++ + +H++ GRVGR E Sbjct 518 QVMREFSANHCQILVSTTVVEVGVNVPNATIMVIYDADRFGLSQLHQLRGRVGRGEHQSF 577 Query 615 AISLVATEKE--KVWYHVCSSRGKGCYNTRLK-EDGGCTIWYNEMQ 657 I + + E K + S G + E G ++ + Q Sbjct 578 CILMADPKSETGKERMRIMSETNDGFELSEKDLELRGPGDFFGKKQ 623 >sp|Q5F931|UVRB_NEIG1 UvrABC system protein B OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=uvrB PE=3 SV=1 Length=675 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 59/315 (19%), Positives = 108/315 (34%), Gaps = 53/315 (17%) Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E +P TV P + + + + + T V + RP A + I Sbjct 389 EKVMPQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQTIIRPVATQVDDLMSEIND-- 446 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + K ++ ++ TK + L Y+ + G LH D E Sbjct 447 --------RIQKGERVLVTTLTKRMAEQLTDYYSELG---------IKVRYLHSDIDTVE 489 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV--HR-----IGRV 606 R + + + G L+ ++ G+DI V V + +K+ ++ HR IGR Sbjct 490 RVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILD--ADKEGFLRSHRSLIQTIGRA 547 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE--E 664 R G+AI Y ++ + + E + +I+ E Sbjct 548 AR-NVNGVAI---------------------LYADKITDSMKAAVDETERRREKQIKFNE 585 Query 665 HLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYK-GHVDILAPTVQELAALEKEAQ 723 Q++ +K +D + G+ R G K G + ++E+A LEK Q Sbjct 586 EHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKVGEIHNEEDAIKEIAKLEKAMQ 645 Query 724 TSFLHLGYLPNQLFR 738 + L + + R Sbjct 646 QAARDLQFEEAAVLR 660 >sp|Q4WKB5|MPH1_ASPFU ATP-dependent DNA helicase mph1 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=mph1 PE=3 SV=1 Length=1101 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 34/181 (19%), Positives = 63/181 (35%), Gaps = 9/181 (5%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGG--GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + +IF + + + + + P Q S G + +++FKKG Sbjct 662 RIMIFVHFRDSAEEVVRVLKRHEPLIRPHVFVGQSSAKGSEG-MDQKTQLSIVQKFKKGT 720 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 ++ T + G+DI V ++ + R+GR GR R G + L+ KE+ Sbjct 721 YNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRK-RAGNIVLLLMQGKEE 779 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH-LNCTISQVEPDIKVPVDEF 684 Y + K Y + T + I + + + DI V + Sbjct 780 ESY----IKAKDNYEKMQQMIASGTRFTFHDDKSPRILPPGVRPVAEKRQIDIPVENTQA 835 Query 685 D 685 D Sbjct 836 D 836 Score = 38.2 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 25/157 (16%), Positives = 59/157 (38%), Gaps = 12/157 (8%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + V P++ L Q ++ Q P+ ++ G A + ++ + TP Sbjct 334 QIIFVAPTKPLVAQQISACFQVA---GIPRSETTMLTGEAAPGIRAEEWKSK-RVFFMTP 389 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 L + + +G + ++ LV+DEA + + + K +V+ + Sbjct 390 QTLVNDLKSGIADPKRIVLLVVDEAHRATGGYAYVEVVKFLKR------YNKSFRVLALT 443 Query 408 ATLHS--FDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 AT S V+ + + + + + + + VH Sbjct 444 ATPGSTVESVQAIIDDLGIAKVEIRTEQSLDIREYVH 480 >sp|B0XMV6|MPH1_ASPFC ATP-dependent DNA helicase mph1 OS=Aspergillus fumigatus (strain CBS 144.89 / FGSC A1163 / CEA10) OX=451804 GN=mph1 PE=3 SV=1 Length=1101 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 34/181 (19%), Positives = 63/181 (35%), Gaps = 9/181 (5%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGG--GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + +IF + + + + + P Q S G + +++FKKG Sbjct 662 RIMIFVHFRDSAEEVVRVLKRHEPLIRPHVFVGQSSAKGSEG-MDQKTQLSIVQKFKKGT 720 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 ++ T + G+DI V ++ + R+GR GR R G + L+ KE+ Sbjct 721 YNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRK-RAGNIVLLLMQGKEE 779 Query 626 VWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH-LNCTISQVEPDIKVPVDEF 684 Y + K Y + T + I + + + DI V + Sbjct 780 ESY----IKAKDNYEKMQQMIASGTRFTFHDDKSPRILPPGVRPVAEKRQIDIPVENTQA 835 Query 685 D 685 D Sbjct 836 D 836 Score = 38.2 bits (87), Expect = 0.38, Method: Composition-based stats. Identities = 25/157 (16%), Positives = 59/157 (38%), Gaps = 12/157 (8%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + V P++ L Q ++ Q P+ ++ G A + ++ + TP Sbjct 334 QIIFVAPTKPLVAQQISACFQVA---GIPRSETTMLTGEAAPGIRAEEWKSK-RVFFMTP 389 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 L + + +G + ++ LV+DEA + + + K +V+ + Sbjct 390 QTLVNDLKSGIADPKRIVLLVVDEAHRATGGYAYVEVVKFLKR------YNKSFRVLALT 443 Query 408 ATLHS--FDVKKLSEKIMHFPTWVDLKGEDSVPDTVH 442 AT S V+ + + + + + + + VH Sbjct 444 ATPGSTVESVQAIIDDLGIAKVEIRTEQSLDIREYVH 480 >sp|A7IB61|HELS_METB6 ATP-dependent DNA helicase Hel308 OS=Methanoregula boonei (strain DSM 21154 / JCM 14090 / 6A8) OX=456442 GN=hel308 PE=3 SV=1 Length=723 Score = 74.4 bits (181), Expect = 2e-12, Method: Composition-based stats. Identities = 70/410 (17%), Positives = 127/410 (31%), Gaps = 89/410 (22%) Query 256 VALSKAPDGYIVKSQHSGNAQVTQT---KFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 L + + SG + + + + N K L + P + LA + Sbjct 34 RGLLDGKNLLVAIPTASGKTLIAEMAMHRHIANGGKCLYIVPLKALASEKYEEF------ 87 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEA 372 N ++ L G + RD L DI+V T ++D L+ G + + +V+DE Sbjct 88 -GNKGVKVGLSTGDLDRRDDA--LGKN-DIIVATSEKVDSLLRNGARWIPDITLVVIDEI 143 Query 373 DGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLK 432 + S + + I ++ S +Q+I SAT+ + V Sbjct 144 HLIDSPDRGPTLEMV---IAKMRSKNPGMQLIGLSATIGNPKVL---------------- 184 Query 433 GEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKIL 492 L L S R D+ E ++ Sbjct 185 -------------------AGWLDAELVTSSWRPVDLRQGVFYDNRIQFAERMRPVKQVS 225 Query 493 KGEYAVRAIKEH--KMDQAIIFCRTKIDCDNLEQ-----------------YFIQQGGGP 533 K + + + Q ++F ++ + + + + +G Sbjct 226 KNYDDLNLCLDTIAEGGQCLVFVSSRRNAEAFAKRAAGAIKSEDAALAACAERLLEGTPT 285 Query 534 DKKGHQFSCVCL-----HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI 588 + +CV H ER E F+K ++ + T A G+++ VI Sbjct 286 EMVKTLAACVAKGAAFHHAGLSRKERSIVEEAFRKNLLKCISSTPTLAAGLNLPA-RRVI 344 Query 589 NVTL----------PDEKQNYVHRIGRVG--RAERMGLAISLVATEKEKV 626 P Y GR G R + G A+ L+A E E+V Sbjct 345 IRDYLRFSAGEGMQPIPVSEYRQMAGRAGRPRLDPYGEAV-LIAKEAEQV 393 >sp|O75417|DPOLQ_HUMAN DNA polymerase theta OS=Homo sapiens OX=9606 GN=POLQ PE=1 SV=2 Length=2590 Score = 74.8 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 58/401 (14%), Positives = 127/401 (32%), Gaps = 41/401 (10%) Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP----GRLDDLVSTGKLNLSQV 364 + ++ +G + S L DI V T G ++ L+ K++L + Sbjct 157 LQSLFQEVGIKVDGYMGSTSPSRHFSSL----DIAVCTIERANGLINRLIEENKMDL--L 210 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV------------CSATLHS 412 +V+DE L + + +I +T Q + SATL + Sbjct 211 GMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSATLPN 270 Query 413 FDV-------KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 ++ + P +K +S+ D+ +V P + + Sbjct 271 LELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLC 330 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEY------AVRAIKEHKMDQAIIFCRTKIDC 519 + + + S + + I+ E+ A +K + I+ + ++ Sbjct 331 YETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVKPSECPPVILEQKELLEV 390 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 + + +K + H ER F++G +R L T + G+ Sbjct 391 MDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGV 450 Query 580 DIHGVPYVINVTL----PDEKQNYVHRIGRVGRAE--RMGLAISLVATEKEKVWYHVCSS 633 ++ +I + P + Y +GR GR +G +I + ++ + Sbjct 451 NLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQG 510 Query 634 RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE 674 K + + +G +L I + T + Sbjct 511 SLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMH 551 Score = 39.0 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPL--ILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 G+ + + + QAE + L +L G +++ +A T +GKT + +++ V Sbjct 75 GLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVL 134 Query 66 ETLKD 70 E K Sbjct 135 EMRKK 139 >sp|O33395|UVRB_NEIMB UvrABC system protein B OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=uvrB PE=3 SV=3 Length=675 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 101/312 (32%), Gaps = 47/312 (15%) Query 434 EDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILK 493 E +P T+ P + + + + + T V + RP A + I Sbjct 389 EKVMPQTIFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEIND-- 446 Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 + K ++ ++ TK + L Y+ + G LH D E Sbjct 447 --------RIEKGERVLVTTLTKRMAEQLTDYYSELG---------IKVRYLHSDIDTVE 489 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV--HR-----IGRV 606 R + + + G L+ ++ G+DI V V + +K+ ++ HR IGR Sbjct 490 RVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILD--ADKEGFLRSHRSLIQTIGRA 547 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL 666 R G+AI + S T + + + + +I++ + Sbjct 548 AR-NVNGVAILYAD--------KITDSMKAAIDETERRREKQIKFNEEQGIVPQQIKKQV 598 Query 667 NCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSF 726 I V + GK G + ++E+A LEK Q + Sbjct 599 KDIIDGVYHEEDGSKGRLKGKNK----------VKVGEIHNEEDAIKEIAKLEKAMQQAA 648 Query 727 LHLGYLPNQLFR 738 L + + R Sbjct 649 RDLQFEEAAVLR 660 >sp|P9WMQ7|RECG_MYCTU ATP-dependent DNA helicase RecG OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=recG PE=3 SV=1 Length=737 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 67/415 (16%), Positives = 133/415 (32%), Gaps = 64/415 (15%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN---A 275 K+ L A +L+ + G+ E DG +A ++ + + SG A Sbjct 268 SAAWKSNGL-AAELLRRLPFELTAGQREVLDVLSDG-LAANRPLNRLLQGEVGSGKTIVA 325 Query 276 QVTQTKFLPNAPKALIVEPSRELAEQ----TLNNIKQFKKYIDNPK----LRELLIIG-- 325 + + + + ++ P+ LA Q + + R L+ G Sbjct 326 VLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSM 385 Query 326 --GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 G + + + V IV+GT + ++ + +V+DE G Sbjct 386 TAGQKKQVRAEIASGQVGIVIGT-----HALLQEAVDFHNLGMVVVDEQHRF---GVEQ- 436 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 +Q+ G ++V +AT +P TV Sbjct 437 ----RDQLRAKAPAGITPHLLVMTAT--------------------------PIPRTVAL 466 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V + LG+ I T+ + KD + E + Y V + Sbjct 467 TVYGDLETSTLRELPLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRID 526 Query 504 HKMDQAIIF-CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 D + R + L + + +HG ++ + F+ Sbjct 527 ESDDTDVQGGVRPSATAEGLFSRLR------SAELAELRLALMHGRLSADDKDAAMAAFR 580 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI-GRVGRAERMGLAI 616 G+V L+CT V G+D+ ++ + + +H++ GR+GR E + + Sbjct 581 AGEVDVLVCTTVIEVGVDVPNATVMLVMDADRFGISQLHQLRGRIGRGEHPSVCL 635 >sp|P9WMQ6|RECG_MYCTO ATP-dependent DNA helicase RecG OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=recG PE=3 SV=1 Length=737 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 67/415 (16%), Positives = 133/415 (32%), Gaps = 64/415 (15%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN---A 275 K+ L A +L+ + G+ E DG +A ++ + + SG A Sbjct 268 SAAWKSNGL-AAELLRRLPFELTAGQREVLDVLSDG-LAANRPLNRLLQGEVGSGKTIVA 325 Query 276 QVTQTKFLPNAPKALIVEPSRELAEQ----TLNNIKQFKKYIDNPK----LRELLIIG-- 325 + + + + ++ P+ LA Q + + R L+ G Sbjct 326 VLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSM 385 Query 326 --GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 G + + + V IV+GT + ++ + +V+DE G Sbjct 386 TAGQKKQVRAEIASGQVGIVIGT-----HALLQEAVDFHNLGMVVVDEQHRF---GVEQ- 436 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 +Q+ G ++V +AT +P TV Sbjct 437 ----RDQLRAKAPAGITPHLLVMTAT--------------------------PIPRTVAL 466 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V + LG+ I T+ + KD + E + Y V + Sbjct 467 TVYGDLETSTLRELPLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRID 526 Query 504 HKMDQAIIF-CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 D + R + L + + +HG ++ + F+ Sbjct 527 ESDDTDVQGGVRPSATAEGLFSRLR------SAELAELRLALMHGRLSADDKDAAMAAFR 580 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI-GRVGRAERMGLAI 616 G+V L+CT V G+D+ ++ + + +H++ GR+GR E + + Sbjct 581 AGEVDVLVCTTVIEVGVDVPNATVMLVMDADRFGISQLHQLRGRIGRGEHPSVCL 635 >sp|P64323|RECG_MYCBO ATP-dependent DNA helicase RecG OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=recG PE=3 SV=1 Length=737 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 67/415 (16%), Positives = 133/415 (32%), Gaps = 64/415 (15%) Query 219 PPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGN---A 275 K+ L A +L+ + G+ E DG +A ++ + + SG A Sbjct 268 SAAWKSNGL-AAELLRRLPFELTAGQREVLDVLSDG-LAANRPLNRLLQGEVGSGKTIVA 325 Query 276 QVTQTKFLPNAPKALIVEPSRELAEQ----TLNNIKQFKKYIDNPK----LRELLIIG-- 325 + + + + ++ P+ LA Q + + R L+ G Sbjct 326 VLAMLQMVDAGYQCALLAPTEVLAAQHLRSIRDVLGPLAMGGQLGGAENATRVALLTGSM 385 Query 326 --GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDF 383 G + + + V IV+GT + ++ + +V+DE G Sbjct 386 TAGQKKQVRAEIASGQVGIVIGT-----HALLQEAVDFHNLGMVVVDEQHRF---GVEQ- 436 Query 384 INRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHH 443 +Q+ G ++V +AT +P TV Sbjct 437 ----RDQLRAKAPAGITPHLLVMTAT--------------------------PIPRTVAL 466 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 V + LG+ I T+ + KD + E + Y V + Sbjct 467 TVYGDLETSTLRELPLGRQPIATNVIFVKDKPAWLDRAWRRIIEEAAAGRQAYVVAPRID 526 Query 504 HKMDQAIIF-CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 D + R + L + + +HG ++ + F+ Sbjct 527 ESDDTDVQGGVRPSATAEGLFSRLR------SAELAELRLALMHGRLSADDKDAAMAAFR 580 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRI-GRVGRAERMGLAI 616 G+V L+CT V G+D+ ++ + + +H++ GR+GR E + + Sbjct 581 AGEVDVLVCTTVIEVGVDVPNATVMLVMDADRFGISQLHQLRGRIGRGEHPSVCL 635 >sp|P75558|UVRB_MYCPN UvrABC system protein B OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1) OX=272634 GN=uvrB PE=3 SV=1 Length=657 Score = 74.0 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 87/251 (35%), Gaps = 22/251 (9%) Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMD-QAIIFCRTK 516 R + + ++V + PE+ + + I + K + + + T Sbjct 401 REEEIQLSHNNVVEQLVRPTYLLDPEVIVKPKDNQVEDLVSEIINQRKHNGRTFVTVLTI 460 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 +NL + ++ +H D K ER L +KG+ L+ ++ Sbjct 461 KMAENLTDFLKER---------NIKVAYIHKDIKALERLILLTDLRKGEYECLVGINLLR 511 Query 577 RGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVC 631 G+D+ V V LP ++++ + IGR R G I T E++ + Sbjct 512 EGLDVPEVSLVAIFDADIPGLPRDERSLIQIIGRAAR-NVHGRVIMYANTISEQMDKAIK 570 Query 632 SSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYG 691 ++ + E +++ + + LN I + ++T Sbjct 571 ETQRRRTIQMAYNEQ------HHKTPMTVQKPITLNQPIKLKTKSSEQQKAALIKQLTKE 624 Query 692 QKRAAGGGSYK 702 K+AA +Y+ Sbjct 625 MKQAAANQNYE 635 >sp|B0SLS0|UVRB_LEPBP UvrABC system protein B OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) OX=456481 GN=uvrB PE=3 SV=1 Length=664 Score = 74.0 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 59/355 (17%), Positives = 111/355 (31%), Gaps = 51/355 (14%) Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 P L D L++DE+ L I M+ D R Q +V Sbjct 320 PACLLDYFPGKDF------LLIIDESHVTL-----PQIGGMY------AGDRSRKQTLVE 362 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 L + ++F + E P T++ P + ++ + T Sbjct 363 ---FGFRLPSALDNRPLNFTEF-----EAMTPRTLYVSATPDQNELNKSEAVFEQIIRPT 414 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + RP N E I+ ++ ++ ++ +I TK ++L Y+ Sbjct 415 GLLDPVVEVRPTTNQIEDLLNEIR----------LRINQKERVLITTLTKKMSEDLTDYY 464 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G LH + ER + + +KG ++ ++ G+DI V Sbjct 465 KEVG---------LKIAYLHSEIDTIERTEIIRDLRKGVYDCIVGINLLREGLDIPEVSL 515 Query 587 VINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 V + ++ V IGR R G AI + + + + + Sbjct 516 VAILDADKEGFLRNYKSLVQTIGRAAR-NVNGKAILYADRMTDSIKKAMSETERRRLIQE 574 Query 642 RLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAA 696 E G T + + + +I E +K EF K + + Sbjct 575 AHNEKMGITPQTIQKE-IHDILPREMAEEDSKEEALKDLEKEFTLKKYKTKDKLR 628 >sp|B0SDE2|UVRB_LEPBA UvrABC system protein B OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=uvrB PE=3 SV=1 Length=664 Score = 74.0 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 59/355 (17%), Positives = 111/355 (31%), Gaps = 51/355 (14%) Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 P L D L++DE+ L I M+ D R Q +V Sbjct 320 PACLLDYFPGKDF------LLIIDESHVTL-----PQIGGMY------AGDRSRKQTLVE 362 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 L + ++F + E P T++ P + ++ + T Sbjct 363 ---FGFRLPSALDNRPLNFTEF-----EAMTPRTLYVSATPDQNELNKSEAVFEQIIRPT 414 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + RP N E I+ ++ ++ ++ +I TK ++L Y+ Sbjct 415 GLLDPVVEVRPTTNQIEDLLNEIR----------LRINQKERVLITTLTKKMSEDLTDYY 464 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G LH + ER + + +KG ++ ++ G+DI V Sbjct 465 KEVG---------LKIAYLHSEIDTIERTEIIRDLRKGVYDCIVGINLLREGLDIPEVSL 515 Query 587 VINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNT 641 V + ++ V IGR R G AI + + + + + Sbjct 516 VAILDADKEGFLRNYKSLVQTIGRAAR-NVNGKAILYADRMTDSIKKAMSETERRRLIQE 574 Query 642 RLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAA 696 E G T + + + +I E +K EF K + + Sbjct 575 AHNEKMGITPQTIQKE-IHDILPREMAEEDSKEEALKDLEKEFTLKKYKTKDKLR 628 >sp|Q9U2G0|U520_CAEEL U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Caenorhabditis elegans OX=6239 GN=snrp-200 PE=3 SV=1 Length=2145 Score = 74.4 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 66/438 (15%), Positives = 133/438 (30%), Gaps = 57/438 (13%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 K + Q GN + K + + P + L + F K + Sbjct 497 APTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFKIVYIAPMKSL---VQEMVGSFSKRL 553 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ--VRFLVLDE 371 + + G + + ++V TP + D + G VR L++DE Sbjct 554 APFGITVGEMTGDAQMSKEQFM---ATQVIVCTPEKYDVVTRKGGERAYNQMVRLLIIDE 610 Query 372 ADGLLSQGYSDFINRMH-NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVD 430 LL + + I Q+ + +++ SATL ++ + ++ + P + Sbjct 611 IH-LLHDDRGPVLESIVVRTIRQMEQNHDECRLVGLSATLPNY--QDVATFLRVKPEHLH 667 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 P + + V K + L + + V+ K G + ++ + K Sbjct 668 FFDNSYRPVPLEQQYIGVTEK-----KALKRFQAMNEVVYDKIMEHAGKSQVLVFVHSRK 722 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH-GDR 549 + D F R + + +Q D K +H Sbjct 723 ETAKTAKAIRDACLEKDTLSAFMREGSASTEILRTEAEQAKNLDLKDLLPYGFAIHHAGM 782 Query 550 KPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR---- 605 +R + F ++ L T A G+++ +I Q Y GR Sbjct 783 NRVDRTLVEDLFADRHIQVLFSTATLAWGVNLPAHTVII-----KGTQIYNPEKGRWTEL 837 Query 606 --------VGRAER-----MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIW 652 +GRA R G I + + + + + + + Sbjct 838 GALDIMQMLGRAGRPQYDDRGEGILITNHSELQYYLSLMNQQ-----------------L 880 Query 653 YNEMQLLSEIEEHLNCTI 670 E Q++S + + LN + Sbjct 881 PVESQMVSRLTDMLNAEV 898 >sp|F0NDL2|HELS_SULIR ATP-dependent DNA helicase Hel308 OS=Sulfolobus islandicus (strain REY15A) OX=930945 GN=hel308 PE=1 SV=1 Length=715 Score = 74.0 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 69/364 (19%), Positives = 130/364 (36%), Gaps = 47/364 (13%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L N KA+ V P R L T FK + ++ + + G D + L+N DI Sbjct 72 LKNGGKAIYVTPLRAL---TNEKYLTFKDW-ESIGFKVAMTSGDYDTDD--AWLKN-YDI 124 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++ T +LD L L++ + VLDE L + + T KR Sbjct 125 IITTYEKLDSLWRHRPDWLNEANYFVLDELHYLNDPERGPVVESV-------TIRAKRRN 177 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SAT+ ++ K++++ + P + + V + + P+ + + Sbjct 178 LLALSATISNY--KQIAKWLGAEPVATNWRP-------VPLMEGVMYPERKKKEYTILFR 228 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC--D 520 T VH D + + + + + K+ + F + Sbjct 229 DNTTRKVHGDDAIIAYTLDSLSKNGQVLVFRNSRKMAESTALKIANYMNFVSLDEKAISE 288 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCL-----HGDRKPHERKQNLERFKKGDVRFLICTDVA 575 L Q + GG D+K S + H R E F+K ++ ++ T Sbjct 289 ILNQLDDIEEGGSDEKELLKSLISKGVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTL 348 Query 576 ARGIDIHGVPYVI------N------VT-LPDEKQNYVHRIGRVGRAE--RMGLAISLVA 620 A G+++ +I N +P Y GR GR ++G +I +V Sbjct 349 AAGVNLPARTVIIGDIYRFNRKIVGYYDEIP--VMEYKQMSGRAGRPGFDQIGESIIVVR 406 Query 621 TEKE 624 +++ Sbjct 407 DKED 410 Score = 42.0 bits (97), Expect = 0.023, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 29/66 (44%), Gaps = 1/66 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVI 61 + ++ + + ++ Q E++ +L G +L+ + TGSGKT + +I Sbjct 9 SIDDLKLPSNVIDIIKNRGIKKLNPPQTEAVKKGLLDGNRLLLTSPTGSGKTLIAEMGII 68 Query 62 QIVYET 67 + + Sbjct 69 SFLLKN 74 >sp|Q8ENJ5|UVRB_OCEIH UvrABC system protein B OS=Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831) OX=221109 GN=uvrB PE=3 SV=1 Length=660 Score = 73.6 bits (179), Expect = 3e-12, Method: Composition-based stats. Identities = 60/343 (17%), Positives = 111/343 (32%), Gaps = 52/343 (15%) Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP 426 +++DE+ L I M N D R QV+V + L + + P Sbjct 335 VIIDESHVTL-----PQIRGMFN------GDQARKQVLV------DHGFR-LPSAMDNRP 376 Query 427 TWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWS 486 + ED V+ P + + E + T + K RP + Sbjct 377 LRFQ-EFEDKTKQLVYVSATPGPYELEHSPEMTEQIIRPTGLLDPKVEVRPIEGQIDNLI 435 Query 487 EAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH 546 E I+ I+ K ++ +I TK ++L Y + G LH Sbjct 436 EEIR----------IRMEKNERVLITTLTKKMSEDLTDYLKEIG---------MKVAYLH 476 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVH 601 + K ER + + + G L+ ++ G+DI V V + +++ + Sbjct 477 SEIKTLERIEVIRDLRVGKFDVLVGINLLREGLDIPEVSLVSILDADKEGFLRSERSLIQ 536 Query 602 RIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSE 661 +GR R G I + + + + + T E G T ++ Sbjct 537 TMGRAAR-NENGKVIMYADKMTDSMKKAIDETNRRRTIQTEYNEQHGITPKTIRKEVRDV 595 Query 662 IE--------EHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAA 696 I+ E Q+ K ++ ++ K+AA Sbjct 596 IKATTAAEETESYEPKTKQINKMTKKEREKVIEQMENEMKQAA 638 >sp|Q57828|CS3HE_METJA CRISPR-associated helicase Cas3 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=cas3 PE=3 SV=1 Length=614 Score = 73.6 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 73/402 (18%), Positives = 138/402 (34%), Gaps = 51/402 (13%) Query 286 APKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVG 345 P+ + V P+R L +++ + Y ++++L I G + + + V + G Sbjct 65 VPRLIYVLPTRSL---VEKQVERIRNY-----IKKILEIKGYSKDKVEELAKKIVQVEYG 116 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 L T + F+VL D L Y +R ++V Sbjct 117 -------LEETHAF----LGFVVLTTWDTFL---YGLAAHRTVGDRFTFPCGAIAQSLVV 162 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 +++ ++ ++ P + L + V V V + T+ L + LG Sbjct 163 F------DEIQMYQDESLYMPRLIGLVVKRLVEANVPLVFMTATLPTE-LKKILGIHDEE 215 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE--HKMDQAIIFCRTKIDCDNLE 523 V+ +D +P E+ E + L E IK+ ++ + +I T + Sbjct 216 PITVNPEDTKKP--ERGEVVVEFKEKLSDEELSNEIKKAINEGKKVLIIKNTVNSAIEVY 273 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + Q G + + LH +R + + ++ T V G+D+ Sbjct 274 EKVKQLG----------NSLLLHSRFTVEDRAEKEKDI--DKAEIIVATQVVEAGLDLTN 321 Query 584 VPYVINVTLPDEKQNYVHRIGRVGRA-ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTR 642 V VI L + RIGR R G I ++ EK+ G N Sbjct 322 VGLVIT-DLAP-LDALIQRIGRCARRKGERGKVIVVLPNFNEKINEDHREKVILGFKNIP 379 Query 643 LKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEF 684 E+ T+ N+ + E TI + + K+ +F Sbjct 380 F-ENAYVTLVNNKD--YGRVIELTIETIEEKKGKSKIVPKKF 418 >sp|A3GH78|MPH1_PICST ATP-dependent DNA helicase MPH1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=MPH1 PE=3 SV=3 Length=1050 Score = 74.0 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 20/85 (24%), Positives = 37/85 (44%), Gaps = 1/85 (1%) Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 +K+ ++ FK+G L+ T + G+DI V +I + R+GR G Sbjct 525 GMNQKLQKEIIKNFKQGTYNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTG 584 Query 608 RAERMGLAISLVATEKEKVWYHVCS 632 R R G + L ++ +E + + Sbjct 585 RK-RDGKVVLLFSSNEESKFDKAMN 608 Score = 38.2 bits (87), Expect = 0.36, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 67/156 (43%), Gaps = 14/156 (9%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 + V P++ L Q IK P + +++ R + + + TP Sbjct 135 IFVAPTKPLVAQ---QIKACCSITGIPSSKVAILL--DKTRKNRGEIWDEKQVFFTTPQV 189 Query 350 LDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSAT 409 +++ +++G ++ + LV+DEA + I + ++ +++ +AT Sbjct 190 VENDLASGLVDPKTIALLVIDEAHRAKGNYAYNNIVKFMDRF------TNSYRILALTAT 243 Query 410 LHSFDVKKLSEKIMH-FPTWVDLKGEDSVPDTVHHV 444 + DV + E I + + V+++ E+S+ D + ++ Sbjct 244 -PASDVDGVQEIIDNLNISKVEVRSEESI-DIIKYM 277 >sp|Q97VY9|HELS_SACS2 ATP-dependent DNA helicase Hel308 OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=hel308 PE=3 SV=1 Length=708 Score = 73.6 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 122/364 (34%), Gaps = 47/364 (13%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 L N KA+ V P R L T FK + ++ + + G D + L+N DI Sbjct 65 LKNGGKAIYVTPLRAL---TNEKYLTFKDW-ESIGFKVAMTSGDYDTDD--AWLKN-YDI 117 Query 343 VVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQ 402 ++ T +LD L L++ + VLDE L + + T KR Sbjct 118 IITTYEKLDSLWRHRPDWLNEANYFVLDELHYLNDPERGPVVESV-------TIRAKRRN 170 Query 403 VIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKS 462 ++ SAT+ ++ K++++ + P + + V + + P+ + + Sbjct 171 LLALSATISNY--KQIAKWLGAEPVATNWRP-------VPLMEGVMYPERKKKEYTILFR 221 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC-DN 521 VH D + + + + + K+ + F Sbjct 222 DNTARKVHGDDAIIAYTLDSLSKNGQVLVFRNSRKMAESTALKIANYMNFVSLDEKAISE 281 Query 522 LEQYFIQQGGGPDKKGHQFS------CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVA 575 + + G + H R E F+K ++ ++ T Sbjct 282 ILKQLDDIEEGGSDEKELLKSLISKGVAYHHAGLSKALRDIIEESFRKRKIKVIVATPTL 341 Query 576 ARGIDIHGVPYVI------N------VT-LPDEKQNYVHRIGRVGRAE--RMGLAISLVA 620 A G+++ +I N +P Y GR GR ++G +I +V Sbjct 342 AAGVNLPARTVIIGDIYRFNRKIVGYYDEIP--VMEYKQMSGRAGRPGFDQIGESIIVVR 399 Query 621 TEKE 624 +++ Sbjct 400 DKED 403 Score = 42.0 bits (97), Expect = 0.023, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 29/66 (44%), Gaps = 1/66 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVI 61 + ++ + + ++ Q E++ +L G +L+ + TGSGKT + +I Sbjct 2 SIDDLKLPSNVIDIIKNRGIKKLNPPQTEAVKKGLLDGNRLLLTSPTGSGKTLIAEMGII 61 Query 62 QIVYET 67 + + Sbjct 62 SFLLKN 67 >sp|Q74K90|UVRB_LACJO UvrABC system protein B OS=Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533) OX=257314 GN=uvrB PE=3 SV=1 Length=671 Score = 73.2 bits (178), Expect = 4e-12, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 92/297 (31%), Gaps = 29/297 (10%) Query 408 ATLHSFDV----KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 AT+ + ++ + + D+ P + VN Sbjct 347 ATMPELKAMYNGDRARKQTLIDYGFRLPSALDNRPLKLEEFEKHVNQIMYVSATPGDYEL 406 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE-HKMDQAIIFCRTKIDCDNL 522 +TD + G PE+ IK + K + ++ + TK ++L Sbjct 407 NQTDHKVEQIIRPTGLLDPEIEVRPIKGQIDDLVGEVNKRIERNERVFVTTLTKKMAEDL 466 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Y G LH D K ER + + + G LI ++ GID+ Sbjct 467 TDYLKDLG---------IKVRYLHSDIKTLERLEIIRDLRLGKFDVLIGINLLREGIDVP 517 Query 583 GVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 V V + + V IGR R G I + + + + ++ + Sbjct 518 EVSLVAILDADKEGFLRSTRPLVQTIGRAAR-NSNGKVIMYADSITDSMREAIDATERRR 576 Query 638 CYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIK-----VPVDEFDGKVT 689 + ++ G T ++ I + ++ T + + K + DE K Sbjct 577 SLQMKFNKEHGITP----KTIVKPIRDVISITKDSEDKENKESFADLNFDELTKKQK 629 >sp|Q9FNQ1|DEXHE_ARATH DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana OX=3702 GN=BRR2C PE=2 SV=1 Length=2157 Score = 73.6 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 116/367 (32%), Gaps = 30/367 (8%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVV 344 N K + V P + LA F + + + + G + + LE ++V Sbjct 560 NEFKIVYVAPMKALA---AEVTSAFSRRLAPLNMVVKELTG--DMQLTKTELEET-QMIV 613 Query 345 GTPGRLDDLVSTGKLNLSQ---VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL 401 TP + D+++ ++S V+ L++DE L + + + QV S + Sbjct 614 TTPEK-WDVITRKSSDMSMSMLVKLLIIDEVHLLNDDRGAVIEALVARTLRQVESTQTMI 672 Query 402 QVIVCSATLHSF-DVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 +++ SATL S+ V + + + E L Sbjct 673 RIVGLSATLPSYLQVAQFLR-VNTDTGLFYFDSSYRPVPLAQQYIGITEHNFAARNELLN 731 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + + K + + K R + + F Sbjct 732 EICYKKVVDSIKQGHQAMIFVHSRKDTSKTAEKLVDLARQYETLDL-----FTNETHPQF 786 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLH-GDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 L + + + D + +H +R F G ++ L+CT A G+ Sbjct 787 QLMKKDVMKSRNKDLVKFFEAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVCTATLAWGV 846 Query 580 DIHGVPYVI----NVTL-PDEKQNY-----VHRIGRVGR--AERMGLAISLVATEKEKVW 627 ++ VI ++ + GR GR ++ G I + + +K + Sbjct 847 NLPAHTVVIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYY 906 Query 628 YHVCSSR 634 + +S+ Sbjct 907 LRLLTSQ 913 Score = 67.5 bits (163), Expect = 4e-10, Method: Composition-based stats. Identities = 92/557 (17%), Positives = 185/557 (33%), Gaps = 68/557 (12%) Query 202 HVKFSKNGKDLGL--AFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALS 259 F+ + +L L A + + P L N + + F F L Sbjct 1309 ETYFTISFHNLALPEARTSHTELLDLKPLPVTSLGNKLYESLYKFSHFNPIQTQIFHVLY 1368 Query 260 KAPDGYIVKSQH----SGNAQVTQTKFLPNAP--KALIVEPSRELAEQTLNNIKQFKKYI 313 + +V + + +A++ + P K + + P L + +KK++ Sbjct 1369 HTDNNVLVGAPTGSGKTISAELAMLRLFSTQPDMKVVYIAP---LKAIVRERMNDWKKHL 1425 Query 314 DNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVLD 370 P +E++ + G D +++L DI++ TP + D +S + + +V ++LD Sbjct 1426 VAPLGKEMVEMTGDYTPDLVALLS--ADIIISTPEK-WDGISRNWHTRSYVKKVGLVILD 1482 Query 371 EADGLLSQGYSDFINRMHNQIPQVTSDGKR--LQVIVCSATLHSFDVKKLSEKIMHFPTW 428 E LL + + +++ ++S +R V + +A ++ D+ Sbjct 1483 EIH-LLGADRGPILEVIVSRMRYISSQTERSVRFVGLSTALANAGDLADW--------LG 1533 Query 429 VDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEA 488 V G + +V V + V+ + + + +A T ++ + Sbjct 1534 VGEIGLFNFKPSVRPVPIEVHIQGYPGKYYCPRMNSMNKPAYAAICTHSPTKPVLIFVSS 1593 Query 489 IKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGD 548 + + + F ++L+ Q + QF H Sbjct 1594 RRQTRLTALDLIQFAASDEHPRQFLSVSE--EDLQMVLSQITDQNLRHTLQFGIGLHHAG 1651 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN------------VTLPDEK 596 H+R E F ++ L+ T A G+++ +I V P Sbjct 1652 LNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRYVDFPLT- 1710 Query 597 QNYVHRIGRVGR--AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 + +GR GR ++ G A+ LV K+ + + Sbjct 1711 -EILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFL-----------------YEPFPV 1752 Query 655 EMQLLSEIEEHLNCTISQVEPDIKVPVDE-FDGKVTYGQKRAAGGGSYKGHVDILAPTVQ 713 E L ++ +H N I V I D TY +R +Y G T+ Sbjct 1753 ESSLKEKLHDHFNAEI--VSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGLEGTQDETI- 1809 Query 714 ELAALEKEAQTSFLHLG 730 + L + QT+F L Sbjct 1810 -CSYLSRLVQTTFEDLE 1825 >sp|Q2URJ5|MPH1_ASPOR ATP-dependent DNA helicase mph1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=mph1 PE=3 SV=2 Length=1129 Score = 73.2 bits (178), Expect = 5e-12, Method: Composition-based stats. Identities = 33/200 (17%), Positives = 65/200 (33%), Gaps = 8/200 (4%) Query 442 HHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 + V + +L L + + + + +A + GE A Sbjct 635 YQRQVVQDESFKKLINHLQPWTKNPEFIGHPKLEYLKSVVLNHFMDAGEGSNGE----AS 690 Query 502 KEHKMDQAIIFCRTKIDCDNLEQYFIQQGG--GPDKKGHQFSCVCLHGDRKPHERKQNLE 559 + +IF + + + + + P Q S G + ++ Sbjct 691 DSQSSTRIMIFVHFRDSAEEVTRVLKRYEPMIRPHVFVGQSSAKGSEG-MGQKTQLDIVQ 749 Query 560 RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV 619 +FKKG ++ T + G+DI V ++ + R+GR GR R G + L+ Sbjct 750 KFKKGTYNTIVATSIGEEGLDIGEVDLIVCYDSSASPIRMLQRMGRTGRK-RAGNIVLLL 808 Query 620 ATEKEKVWYHVCSSRGKGCY 639 KE+ Y + Sbjct 809 MEGKEEESYIKAKDNYEKMQ 828 Score = 38.6 bits (88), Expect = 0.27, Method: Composition-based stats. Identities = 17/87 (20%), Positives = 37/87 (43%), Gaps = 4/87 (5%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + V P++ L Q ++ P+ + ++ G A + +N + TP Sbjct 369 QIIFVAPTKPLVAQQISACFGIA---GIPRSQTTMLTGEAAPGIRAEEWQNK-RVFFMTP 424 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADG 374 L + + +G + ++ LV+DEA Sbjct 425 QTLINDLKSGIADPKRIVLLVVDEAHR 451 >sp|Q8R418|DICER_MOUSE Endoribonuclease Dicer OS=Mus musculus OX=10090 GN=Dicer1 PE=1 SV=3 Length=1916 Score = 73.6 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 103/289 (36%), Gaps = 32/289 (11%) Query 338 NGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVL-----DEADGLLSQGYSDFINRMHNQIP 392 N ++ V + R L+S L+ + +VL D+ G++ + +I ++ Sbjct 282 NDCNVAVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEEL- 340 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 + ++ + TL + L E+ P +DLK + ++ P Sbjct 341 -------HRKFLLFTDTLL-RKIHALCEEYF-SPASLDLKYVTPKVMKLLEILRKYKPYE 391 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 + +E + + R D + + + E E K + IIF Sbjct 392 RQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETNFPSPFTNILC----GIIF 447 Query 513 CRTKIDCDNLEQYFIQQG-GGPDKKGHQFSCVCLHG-DRKP----------HERKQNLER 560 + L + + G P+ + + HG + ++++ L + Sbjct 448 VERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEVLRK 507 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRA 609 F+ + LI T V G+DI V+ LP E ++YV GR RA Sbjct 508 FRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGR-ARA 555 Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats. Identities = 53/284 (19%), Positives = 91/284 (32%), Gaps = 47/284 (17%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQF 309 P K L A D + ++G+ + A+++ ++ELA Q ++ Sbjct 44 PRKYQVELLEAALDHNTIVCLNTGSGKT---------FIAVLL--TKELAHQIRGDLNPH 92 Query 310 KK---YIDNPKLRELLIIGGVAARDQLSV-----LENGV--------------DIVVGTP 347 K ++ N + + V L V LE +++ T Sbjct 93 AKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSDLEVNASWTKERWSQEFTKHQVLIMTC 152 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 ++ G L+LS + LV DE + I ++ P I+ Sbjct 153 YVALTVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCESCPSCPRILGLTASILN- 211 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH--------HVVVPVNPKTDR--LWE 457 D ++L EKI + E + V +VV P TDR L+E Sbjct 212 ---GKCDPEELEEKIQKLERILRSDAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYE 268 Query 458 RLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAI 501 RL D N + + + +IL AV + Sbjct 269 RLLMELEAALDFINDCNVAVHSKERDSTLISKQILSDCRAVLVV 312 >sp|Q9HMV6|HELS_HALSA ATP-dependent DNA helicase Hel308 OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=hel308 PE=3 SV=1 Length=783 Score = 73.2 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 112/377 (30%), Gaps = 84/377 (22%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 AL + P R LA + + F+++ L + G + L + DIVV T Sbjct 79 TALYIVPLRALAGEKAQEFEAFERF----GLSVGVSTG--NYERDGARLADN-DIVVATS 131 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 ++D LV G + + +V DE + + + ++ LQV+ S Sbjct 132 EKVDSLVRNGAGWIDDLSCVVADEVHLVDDDHRGPTLEV---TLAKLRQQVADLQVVALS 188 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V GE + V P R G+S D Sbjct 189 AT-------------------VGNAGELAAWLDAELVDSDWRPIELRTGVHYGQSLHYDD 229 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 A+ + G+ + + ++ + ++F ++ + + + Sbjct 230 GTQAELSVGSGSQTAAVVADTLA--------------DDGSTLVFVNSRRNAEASARRLA 275 Query 528 QQGGGPDKKGHQFSCVCL---------------------------HGDRKPHERKQNLER 560 G + + H R+ E Sbjct 276 DVTGNALSSAERERLADIAAEIRGVSDTETSDELADAVASGAAFHHAGLAREHRELVEEA 335 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVI----NVT------LPDEKQNYVHRI-GRVGRA 609 F+ V+ + T A G++ V+ P + VH++ GR GR Sbjct 336 FRDRLVKAVSATPTLAAGVNTPARRVVVRDWQRYDGTAGGMQPLDVLE-VHQMFGRAGRP 394 Query 610 ERM--GLAISLVATEKE 624 G A+ L + E Sbjct 395 GLDPYGEAVLLANSHDE 411 >sp|B0R7Q2|HELS_HALS3 ATP-dependent DNA helicase Hel308 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) OX=478009 GN=hel308 PE=3 SV=1 Length=783 Score = 73.2 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 112/377 (30%), Gaps = 84/377 (22%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 AL + P R LA + + F+++ L + G + L + DIVV T Sbjct 79 TALYIVPLRALAGEKAQEFEAFERF----GLSVGVSTG--NYERDGARLADN-DIVVATS 131 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 ++D LV G + + +V DE + + + ++ LQV+ S Sbjct 132 EKVDSLVRNGAGWIDDLSCVVADEVHLVDDDHRGPTLEV---TLAKLRQQVADLQVVALS 188 Query 408 ATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 AT V GE + V P R G+S D Sbjct 189 AT-------------------VGNAGELAAWLDAELVDSDWRPIELRTGVHYGQSLHYDD 229 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 A+ + G+ + + ++ + ++F ++ + + + Sbjct 230 GTQAELSVGSGSQTAAVVADTLA--------------DDGSTLVFVNSRRNAEASARRLA 275 Query 528 QQGGGPDKKGHQFSCVCL---------------------------HGDRKPHERKQNLER 560 G + + H R+ E Sbjct 276 DVTGNALSSAERERLADIAAEIRGVSDTETSDELADAVASGAAFHHAGLAREHRELVEEA 335 Query 561 FKKGDVRFLICTDVAARGIDIHGVPYVI----NVT------LPDEKQNYVHRI-GRVGRA 609 F+ V+ + T A G++ V+ P + VH++ GR GR Sbjct 336 FRDRLVKAVSATPTLAAGVNTPARRVVVRDWQRYDGTAGGMQPLDVLE-VHQMFGRAGRP 394 Query 610 ERM--GLAISLVATEKE 624 G A+ L + E Sbjct 395 GLDPYGEAVLLANSHDE 411 >sp|Q5A1A0|MPH1_CANAL ATP-dependent DNA helicase MPH1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MPH1 PE=3 SV=2 Length=1187 Score = 73.2 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 1/84 (1%) Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 +K+ +++FKKG L+ T + G+DI V +I + R+GR G Sbjct 575 GMSQKLQKEIIKKFKKGVFNILVATSIGEEGLDIGEVDLIICYDSTSSPIKNIQRMGRTG 634 Query 608 RAERMGLAISLVATEKEKVWYHVC 631 R R G + L ++ +E + Sbjct 635 RK-RDGKVLMLFSSNEESKFDKAM 657 Score = 40.9 bits (94), Expect = 0.059, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (44%), Gaps = 5/85 (6%) Query 290 LIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGR 349 + + P+R L Q IK P + +++ R + + N + TP Sbjct 184 IFMAPTRPLVAQ---QIKACCSIAGIPSSKVAILL--DKTRRNRAEIWNSRQVFFTTPQV 238 Query 350 LDDLVSTGKLNLSQVRFLVLDEADG 374 +++ +++G +N + LV+DEA Sbjct 239 VENDLASGVVNPKSIALLVIDEAHR 263 >sp|Q6BRF0|MPH1_DEBHA ATP-dependent DNA helicase MPH1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=MPH1 PE=3 SV=2 Length=1105 Score = 73.2 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 51/139 (37%), Gaps = 6/139 (4%) Query 548 DRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVG 607 +K +++FKKG+ L+ T + G+DI V ++ + R+GR G Sbjct 535 GMNQKLQKDLIKKFKKGEYNILVATSIGEEGLDIGEVDLIVCYDSTSSPIKNIQRMGRTG 594 Query 608 RAERMGLAISLVATEKEKVWYHVCSS---RGKGCYNTRLKEDGGCTIWYNEMQLLSEIEE 664 R R G + L A +E + + + N RL + I E Sbjct 595 RK-RDGKVLLLFAGNEESKFDKAMAGYEFIQQHIMNGRLITLAQSN--RIIPKSYKPIVE 651 Query 665 HLNCTISQVEPDIKVPVDE 683 I + +IK DE Sbjct 652 KKFIEIPEENTEIKAEEDE 670 Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 52/138 (38%), Gaps = 26/138 (19%) Query 247 FKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNI 306 F + + L A + K+ + + T++ P K + + P++ L Q Sbjct 92 FNIVQRAFYDNLLVALPTGLGKTFIASTVMLNFTRWFPRG-KIIFMAPTKPLVAQ----- 145 Query 307 KQFKKYIDNPKLRELLIIGGVAARDQLSVL----ENGVDI------VVGTPGRLDDLVST 356 +++ I G+ + +L N DI TP +++ ++ Sbjct 146 ----------QIKACCGITGIPTSEVAILLDKSRRNRADIWDSKTVFFTTPQVVENDLTA 195 Query 357 GKLNLSQVRFLVLDEADG 374 G ++ +V LV+DEA Sbjct 196 GIIDPKEVVLLVIDEAHK 213 >sp|P54509|YQHH_BACSU Uncharacterized ATP-dependent helicase YqhH OS=Bacillus subtilis (strain 168) OX=224308 GN=yqhH PE=3 SV=1 Length=557 Score = 72.5 bits (176), Expect = 6e-12, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 136/393 (35%), Gaps = 36/393 (9%) Query 311 KYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRL---DDLVSTGKLNLSQVRFL 367 +++ N + L++ ++++ + N V ++ PG L + S + Sbjct 189 EFVRNLVKKYCLLLTATPIQNRIEEIFNLVSLL--KPGHLGSQNHFQEEFAKKKSSL--- 243 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV--CSATLHSFDVKKLSEKIMHF 425 EA L + + R + + ++ + S + L ++I Sbjct 244 ---EAHEHLKDLVNKVMIRNRRHDTGLNWKQRHVETVPIQFS-----PSEQALYDEISRL 295 Query 426 PTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMW 485 ++ T+ +++ + +D + Sbjct 296 KDSINKPASMFSIMTLQRECCSSREAVYMTLKKMLDQKEKQAPAIDEDTISVLIDRINQV 355 Query 486 SEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL 545 ++ K L+ ++ I D+ IIF + L+ + Q G S V Sbjct 356 TQNSKALQVVDLIKKID----DKVIIFTEYRATQIYLQWFLQQNG---------ISSVPF 402 Query 546 HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGR 605 G K ++ + F+ G ++ LI T+ GI++ ++IN LP RIGR Sbjct 403 RGGFKRGKKDWMKDLFR-GKIQVLIATEAGGEGINLQFCNHMINYDLPWNPMRLEQRIGR 461 Query 606 VGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEH 665 + R + K V H+ + + K G ++Q ++ EEH Sbjct 462 IHRLGQERDVHIYNMATKHTVEEHILKLLYEKIHLFE-KVVGELDDILTKIQ-VNNFEEH 519 Query 666 LNCTI--SQVEPDIKVPVDEFDGKVTYGQKRAA 696 L+ + S E ++K+ +D ++Y ++ A Sbjct 520 LHDILYHSATEEEMKIKMDNLTSFLSYKKQLPA 552 >sp|Q97AI2|HELS_THEVO ATP-dependent DNA helicase Hel308 OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) OX=273116 GN=hel308 PE=3 SV=1 Length=674 Score = 72.9 bits (177), Expect = 6e-12, Method: Composition-based stats. Identities = 61/457 (13%), Positives = 143/457 (31%), Gaps = 103/457 (23%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 K++ + P R LA + + + ++ +R L IG D+V+ T Sbjct 67 KSIYIVPLRSLAMEKYEELSRLREL----GMRVKLSIGNYDDTPDFI---KRYDVVILTS 119 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCS 407 + D L+ + +V +V+DE + + + + I ++I S Sbjct 120 EKADSLMHHDPYMMEEVGLMVIDEIHMIGDEYRGPTLETV---ITTARYVNPETRIIALS 176 Query 408 ATLHS-FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 AT+ + ++ + + + PV K L+ Sbjct 177 ATVSNASEIAEWLNASL-----------------IKSSFRPVPLKVGILY---------R 210 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + + + R + + E + Q +IF ++ +++ + Sbjct 211 NRLFLDGDARSDVDINLLVKETVD--------------DGGQVLIFVSSRKRAEDMAKNL 256 Query 527 IQQGGGPD----------------KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLI 570 Q + + H +R + F+ ++ ++ Sbjct 257 SQLFDPINDLKVSSEDANVYDDLLNEMLPHGVSFHHAGLSNEQRSFIEKAFRHRKLKVIV 316 Query 571 CTDVAARGIDIHGVPYVINVTLPDEKQ---NYV------HRIGRVGRAE--RMGLAISLV 619 T A G+++ VI + Y+ IGR GR + G+ I Sbjct 317 ATPTLAAGVNLPA-RLVIVKDVTRYGDLGITYLSNMEVKQMIGRAGRPGYDQYGIGIIYA 375 Query 620 AT-----------------------EKEKVWYHVCSSRGKGCYNTRLK-EDGGCTIWYNE 655 A+ + EKV ++ ++ G ++++ E+ + +Y Sbjct 376 ASANSYQVVKEYISEEPEPVDSYIGKPEKVRFNTLAAIAMGLATSQVEMEEFYRSTFYYA 435 Query 656 MQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQ 692 EI +N +I ++ + + + +G+ Sbjct 436 QNGEDEIPNRINESIKFLKENGFIKEKDSLRATEFGK 472 >sp|Q5NFN4|UVRB_FRATT UvrABC system protein B OS=Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4) OX=177416 GN=uvrB PE=3 SV=1 Length=668 Score = 72.9 bits (177), Expect = 7e-12, Method: Composition-based stats. Identities = 54/314 (17%), Positives = 102/314 (32%), Gaps = 49/314 (16%) Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L + + P + + E +P T++ P N + ++ + + T + + R Sbjct 366 RLPSALDNRPLKFN-EFESLLPQTIYVSATPANYELEKSQNTVQQVIRPTGLLDPEVFVR 424 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 P A E I K ++ +I TK +NL +Y + G Sbjct 425 PVAIQVEDALSEINKAIA----------KEERVLITTLTKKMVENLTEYLSEHG------ 468 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT----- 591 + LH D ER Q + + G L+ ++ G+D+ V ++ Sbjct 469 ---VNVRYLHSDIDTVERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEG 525 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 +++ + IGRV R + G AI V S K T + Sbjct 526 FLRSEKSLIQTIGRVAR-NQNGRAILYADV--------VTKSMQKAMDETLRRR------ 570 Query 652 WYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPT 711 ++++ N + V I +D+ QKRA D+ Sbjct 571 ---------KLQDEYNQKHNIVPKTIIKNIDDMLDSSPEMQKRAYKNNLRLKVDDVDVSA 621 Query 712 VQELAALEKEAQTS 725 + + K + Sbjct 622 ILGMTEATKVIKAL 635 >sp|Q97LQ2|UVRB_CLOAB UvrABC system protein B OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=uvrB PE=3 SV=1 Length=666 Score = 72.5 bits (176), Expect = 7e-12, Method: Composition-based stats. Identities = 46/295 (16%), Positives = 93/295 (32%), Gaps = 41/295 (14%) Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L + P D + E+ + V P N + D + T + + R Sbjct 366 RLPSAYDNRPLKFD-EFEEKINQIVFVSATPSNYELDHSENIAEQVIRPTGLLDPEIEVR 424 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 P + Y+ + ++ TK ++L Y G Sbjct 425 PTKGQ----------IDDLYSEIKNTIQNGFRILVTTLTKKMAEDLTDYLKDLG------ 468 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT----- 591 +H D ER + ++ + G+ L+ ++ G+DI V V + Sbjct 469 ---IKTTYMHSDIDTLERMKIIKDVRTGEFDVLVGINLLREGLDIPEVALVAILDADKEG 525 Query 592 LPDEKQNYVHRIGRVGRAERM-------------GLAISLVATEKEKVWYHVCSSRGKGC 638 +++ + IGR R G AIS K + + + G Sbjct 526 FLRSERSLIQTIGRAARNSESRVIMYGDKITDAMGKAIS---ETKRRRKIQIEYNEKNGI 582 Query 639 YNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQK 693 T +K+ I +E+ + ++ + +I + EF+ ++ K Sbjct 583 KPTTIKKAVRDVIGISEVAEGKTEYKSMDEAVKADNKNIDKLIKEFEKEMKEAAK 637 >sp|Q974S1|HELS_SULTO ATP-dependent DNA helicase Hel308 OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=hel308 PE=1 SV=1 Length=704 Score = 72.5 bits (176), Expect = 8e-12, Method: Composition-based stats. Identities = 83/466 (18%), Positives = 146/466 (31%), Gaps = 50/466 (11%) Query 250 PPKDGFVALSKAPDGYIVKSQHSGNAQVTQT----KFLPNAPKALIVEPSRELAEQTLNN 305 + L + SG + + L KA+ + P R L + N Sbjct 31 QSEAIRKGLLDGKRLLVTSPTASGKTLIAELGMINYLLSKGGKAIYITPLRALTNEKYNT 90 Query 306 IKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVR 365 K + + ++ + G D + LEN DI+V T +LD L L++V Sbjct 91 FKDW----ETLGIKTGMTSGDYDTDD--AWLEN-YDIIVTTYEKLDSLWRHKAKWLNEVS 143 Query 366 FLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS-FDVKKLSEKIMH 424 + VLDE L + + KR V+ SAT+ + ++ + Sbjct 144 YFVLDEFHYLNDPERGPTVESV------AIRAKKRGIVLGLSATISNGKEIANWLNAELV 197 Query 425 FPTWVDL-KGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 W + E + VV T R T D+ +K S Sbjct 198 ATNWRPVPLKEGIIYPEKKGFVVVYKDNTSRKVYGDDAIIAYTLDIVSKGGQVLVFRSSR 257 Query 484 MWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCV 543 +E +Y E K I R + ++ + +G + Sbjct 258 KLAENTARKIVQYMNFVKLEDKKLLEI--ARKIKEVEDAGSNEKEDLYNLVLRGVAYH-- 313 Query 544 CLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI------N------VT 591 H R F+ ++ ++ T A G+++ VI N + Sbjct 314 --HAGLSKGLRDIIESSFRDRILKVIVATPTLAAGVNLPARAVVIGDIYRYNRKVVGYMD 371 Query 592 L-PDEKQNYVHRIGRVGRAE--RMGLAISLVATEK--EKVWYHVCSSRGKGCYNTRLKED 646 L P +Y GR GR G A+ +V ++ EKV+ S + + E Sbjct 372 LIP--VMDYKQMSGRAGRPGFDENGEAVVVVRNKREAEKVYERYLMSDVEPIESKLGSES 429 Query 647 GGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQ 692 + L+S I T ++ +K + + Y + Sbjct 430 AFYSF------LISIIASEGEKTTEELMEYVKETLLPKELAKKYFR 469 Score = 45.5 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 26/147 (18%), Positives = 48/147 (33%), Gaps = 19/147 (13%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVI 61 + ++ + +I ++ Q+E+I +L G +L+ + T SGKT + +I Sbjct 5 SIDDLPLDIKIIDILKRRGIRTLNPPQSEAIRKGLLDGKRLLVTSPTASGKTLIAELGMI 64 Query 62 QIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLC----CQSREVK 117 + K GK T L + N + I + ++ Sbjct 65 NYLL--------SKGGKAIYITPLRALTNEKYNTFKDWETLGIKTGMTSGDYDTDDAWLE 116 Query 118 EWHGCRATKG------LMKGKHYYEVS 138 + T K K EVS Sbjct 117 NYDIIVTTYEKLDSLWRHKAKWLNEVS 143 >sp|Q8YXS9|UVRB_NOSS1 UvrABC system protein B OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=uvrB PE=3 SV=1 Length=665 Score = 72.5 bits (176), Expect = 8e-12, Method: Composition-based stats. Identities = 33/187 (18%), Positives = 67/187 (36%), Gaps = 19/187 (10%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 ++ +I TK ++L +Y + G LH + +R + L+ ++G Sbjct 445 ERVLITTLTKRMAEDLTEYLQEHG---------VKVRYLHSEINSIQRIEILQDLRQGSF 495 Query 567 RFLICTDVAARGIDIHGVPYVINVTLPDEKQNY-------VHRIGRVGRAERMGLAISLV 619 L+ ++ G+D+ V V + +K+ + + IGR R R G AI Sbjct 496 DVLVGVNLLREGLDLPEVSLVAIMD--ADKEGFLRAERSLIQTIGRAARHIR-GQAILYA 552 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKV 679 + + + + + + G T + + I L + D+KV Sbjct 553 DNMTDSMIKAIEETDRRRGIQVAYNKLHGITPQPIVKKSSNAILSFLEVSRRLNATDLKV 612 Query 680 PVDEFDG 686 + D Sbjct 613 VEEHIDE 619 >sp|Q7TV80|UVRB_PROMM UvrABC system protein B OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=uvrB PE=3 SV=1 Length=679 Score = 72.5 bits (176), Expect = 8e-12, Method: Composition-based stats. Identities = 53/361 (15%), Positives = 112/361 (31%), Gaps = 83/361 (23%) Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKK----LSEKIMHFPTWVD 430 L+ G+ + + K Q + SAT +++K+ L+E+++ Sbjct 359 LIEHGFRLPSAADNRPLKSEEFWSKARQTVFVSATPGDWELKQSDGHLAEQVIR------ 412 Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 P V +V V P ++ + L + IR + Sbjct 413 -------PTGVLDPLVEVRPTQGQVDDLLAEIRIRAE----------------------- 442 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 K ++ +I TK ++L Y + + LH + Sbjct 443 --------------KQERVLITTLTKRMAEDLTDYLAE---------NDVRVRYLHSEIH 479 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY-------VHRI 603 ER + ++ + G+ L+ ++ G+D+ V V+ + +K+ + + I Sbjct 480 SIERIEIIQDLRLGEYDVLVGVNLLREGLDLPEVSLVVILD--ADKEGFLRAERSLIQTI 537 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIE 663 GR R G+A+ + + + + + E G + Sbjct 538 GRAARH-VDGMALLYADNLTDSMSRAISETERRREIQKAYNELNGIVPRPAGKRAS---- 592 Query 664 EHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQ 723 N +S +E ++ D D + RA + L L + + Sbjct 593 ---NSILSFLELSRRLQTDGKDADLVQITGRAV---DALDSDQDAGLALDALPELIDQLE 646 Query 724 T 724 T Sbjct 647 T 647 >sp|Q1DW80|DCL2_COCIM Dicer-like protein 2 OS=Coccidioides immitis (strain RS) OX=246410 GN=DCL2 PE=3 SV=3 Length=1435 Score = 72.9 bits (177), Expect = 8e-12, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 61/198 (31%), Gaps = 22/198 (11%) Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRT 515 W+R S++ +T G +P E + + ++ I+F Sbjct 364 WDREDNSYMLNVLSQVVSSTEMGVQNPPD--ELSRKVHKLIDFLVLEHVNGSIGIVFAEE 421 Query 516 KIDCDNLEQYFIQQGGGPDKKGHQF-----------SCVCLHGDRKPHERKQNLERFKKG 564 + L Q K F LH ++ + G Sbjct 422 RTIVIMLAQLLSLHPRTKHIKTTAFLGSSASVSRKSDITELHNPIDQS---TAIDDLRTG 478 Query 565 DVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAI-SLVATEK 623 +I T V GID+ VI LP + ++++ R R GRA + G + +E Sbjct 479 KKDLIIATAVLEEGIDVPICDLVICFDLPKDLRSFIQR--R-GRARKKGSKFALFLHSED 535 Query 624 EKVW--YHVCSSRGKGCY 639 H+ K Y Sbjct 536 RATSSELHLMEKTMKQLY 553 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 43/301 (14%), Positives = 100/301 (33%), Gaps = 48/301 (16%) Query 245 EEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQV--------TQTKFLPNAPKALIVEPSR 296 + LS++ I+ + +G+ + + + P + P+ Sbjct 42 LPPRRARGYQLEMLSESLRQNIIVAMDTGSGKTEIAILRIQRELERCPAHKFVWFMAPTV 101 Query 297 ELAEQTLNNIKQFKKYIDNPKLRELLIIGGV-----AARDQLSVLENGVDIVVGTPGRLD 351 L EQ + I + P + L+ G + + + + IV+ TP L Sbjct 102 ALVEQQHSAISK-----QLPAFQTRLLTGAANVSHWSTKKIWDDILLNIRIVISTPQVLL 156 Query 352 DLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQ----------IPQV-----TS 396 D +S G ++L + LV DEA + ++ I R +P + + Sbjct 157 DALSNGFVDLHTISLLVFDEAHHCVRDAPANRIMRDFYHYHRQEEGTDGLPHILGLTASP 216 Query 397 DGKRLQVIV------CSATLHSFDV-KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 + Q + +A + + ++ + +H P + ++ + V + Sbjct 217 TTRARQTDLEVLEINLNAVCVTPKMHREEMMQFVHMPEYRSIEYQPD--------VQNFS 268 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 ++L + + I D R S + +A++ K + + + + Sbjct 269 SIVEKLSVIINELDIENDPFVKFMRRRNDLKSRQRLLDALENKKTPCLDQLKRCLRRSRV 328 Query 510 I 510 I Sbjct 329 I 329 >sp|Q2VF18|DCL2_CRYPA Dicer-like protein 2 OS=Cryphonectria parasitica OX=5116 GN=DCL-2 PE=3 SV=1 Length=1451 Score = 72.9 bits (177), Expect = 9e-12, Method: Composition-based stats. Identities = 50/286 (17%), Positives = 84/286 (29%), Gaps = 15/286 (5%) Query 409 TLHSFDVKKLSEKIMHFPTWVDLKGED-SVPDTVHHVVVPVNPKTDRLWERLGKSHIRTD 467 T +K + M + D + + + + + + I Sbjct 330 TYVQDTMKSFCRRSMEMAKELGAWAADWFISEAIRLFLAGIYRQGASSKSFRDAEVIFLA 389 Query 468 DVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFI 527 V N P + K+ + + K +AI F + + L Sbjct 390 RVFQDANIEPPPPLTTHSGLSEKVQR--IIEVLLNYDKDARAICFVKERATTVVLSHILT 447 Query 528 QQGGGPDKK--GHQFSCVCLHG------DRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 K G + G D Q LE F++G L+ T V GI Sbjct 448 THPEVSSKFRIGTMVGTSFVPGVKRDFLDLPETGGSQCLEAFREGRKNMLVATSVLEEGI 507 Query 580 DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 D+ +I P+ + ++ R GR R R V E E W ++ K Y Sbjct 508 DVPACNLIICFDKPNNLRAFIQRRGR-ARM-RQSHLYLFVEDEAEADW-EALEAQMKLQY 564 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP-DIKVPVDEF 684 +E N L E + T +++ D K + F Sbjct 565 EDEKREHERLEAIENSEALDYPEELRVESTGARLTINDAKSHLQHF 610 Score = 45.9 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/101 (20%), Positives = 40/101 (40%), Gaps = 13/101 (13%) Query 279 QTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD------Q 332 + + +P + P+ L Q +K P ++ ++ G Sbjct 100 ELEEMPEGQVVWFLTPTVSLCAQQYAVVKA-----QIPSVQTKIVTGADKVDSWSSTTWD 154 Query 333 LSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEAD 373 ++L V +++ TP L D + G +N+S + +V DEA Sbjct 155 GALL--NVKVIITTPQVLLDALLHGFVNISSLALMVFDEAH 193 >sp|Q83NI7|UVRB_TROW8 UvrABC system protein B OS=Tropheryma whipplei (strain TW08/27) OX=218496 GN=uvrB PE=3 SV=1 Length=677 Score = 72.5 bits (176), Expect = 9e-12, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 94/280 (34%), Gaps = 23/280 (8%) Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM--DQAIIF 512 L GK + D + RP + + + + I++ K+ ++ ++ Sbjct 396 LSATPGKYELSKSDGVVEQIIRPTGLVDPKITVKPIKGQIDDLLEEIRKRKLLSERVLVT 455 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 TK + L + + G + LH D R + L + G + L+ Sbjct 456 TLTKRMAEELTDFLSEAG---------VNVSYLHSDIDTLHRVELLTSLRMGRIDVLVGI 506 Query 573 DVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 ++ G+D+ V V + +++ IGR R G E + Sbjct 507 NLLREGLDLPEVSLVAILDADKEGFLRSTTSFIQTIGRAARH-VSGEVHMYADNMTESMQ 565 Query 628 YHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDI--KVPVDEFD 685 + + + G T + +S+I E L+ +++ I +P + D Sbjct 566 KSIDETNRRRRIQQDYNRKMGVTPVPIKKT-VSDITEVLSRPSRKIDCTILDSLPDPKID 624 Query 686 GKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTS 725 GK ++ Y ++ +E A L E Q+ Sbjct 625 GKQIKSHIKSLEAKMYMAAESLM---FEEAAELRDEIQSL 661 >sp|Q65ST2|UVRB_MANSM UvrABC system protein B OS=Mannheimia succiniciproducens (strain MBEL55E) OX=221988 GN=uvrB PE=3 SV=1 Length=678 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 97/320 (30%), Gaps = 52/320 (16%) Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L + + P + + E P T++ P + ++ + +R Sbjct 372 RLPSALDNRPLRFE-EFERLAPQTIYVSATPGPYELEKSGTEIIDQVVR----------P 420 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKE-HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 G PE+ + I + A + + ++ ++ TK ++L Y + G Sbjct 421 TGLLDPEIEIRPVSIQVDDLLSEARQRADRNERVLVTTLTKRMAEDLTDYLDEHG----- 475 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT---- 591 LH D ER + + + G+ L+ ++ G+DI V V + Sbjct 476 ----IRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKE 531 Query 592 -LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +++ + IGR R G AI + +S K T + + Sbjct 532 GFLRSERSLIQTIGRAAR-NLKGKAILYAD--------RITNSMEKAITETNRRREKQ-- 580 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAP 710 + E T + + +D G + + + Sbjct 581 ---------MKYNEEHGITPQGLNKKVGELLDIGQGGSNKSRNKP------RSQKAAEPA 625 Query 711 TVQELAALEKEAQTSFLHLG 730 T + KE Q L Sbjct 626 TTYAIPMTAKEYQQQIKKLE 645 >sp|Q8CGS6|DPOLQ_MOUSE DNA polymerase theta OS=Mus musculus OX=10090 GN=Polq PE=1 SV=2 Length=2544 Score = 72.5 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 62/352 (18%), Positives = 114/352 (32%), Gaps = 42/352 (12%) Query 309 FKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP----GRLDDLVSTGKLNLSQV 364 + L+ +G + Q S L DI V T G ++ L+ K++L + Sbjct 156 LQSLFQEVGLKVDGYMGSTSPTGQFSSL----DIAVCTIERANGLVNRLIEENKMDL--L 209 Query 365 RFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR------------LQVIVCSATLHS 412 +V+DE L + + +I VT +Q++ SATL + Sbjct 210 GMVVVDELHMLGDSHRGYLLELLLTKICYVTRKSASHQAESASTLSNAVQIVGMSATLPN 269 Query 413 FD-VKKL--SEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDV 469 V +E V L + ++++ + + + L + G Sbjct 270 LQLVASWLNAELYHTDFRPVPLLESIKIGNSIYDSSMKLVREFQPLLQVKGDEDHIVSLC 329 Query 470 HAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAII----FCRTKIDCDNLEQY 525 + + + + A H + ++ F +D +L + Sbjct 330 YETIQDNHSVLIFCPSKKWCEKVADIIAREFYNLHHQPEGLVKSSEFPPVILDQKSLLEV 389 Query 526 FIQQGGGPD------KKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 Q P K + H ER F++G +R L T + G+ Sbjct 390 MDQLKRSPSGLDSVLKNTVPWGVAFHHAGLTFEERDIIEGAFRQGFIRVLAATSTLSSGV 449 Query 580 DIHGVPYVINVTL----PDEKQNYVHRIGRVGRAE--RMGLAISLVATEKEK 625 ++ +I + P + Y +GR GR MG +I LV EK Sbjct 450 NLPARRVIIRTPIFSGQPLDILTYKQMVGRAGRKGVDTMGESI-LVCKNSEK 500 Score = 40.1 bits (92), Expect = 0.098, Method: Composition-based stats. Identities = 16/65 (25%), Positives = 31/65 (48%), Gaps = 2/65 (3%) Query 8 GVMPEIAQAVEEMDWLLPTDIQAESIPL--ILGGGDVLMAAETGSGKTGAFSIPVIQIVY 65 G+ + + + QAE + L +L G +++ +A T +GKT + +++ V Sbjct 74 GLPKAVLEKYHSFGVRKMFEWQAECLLLGHVLEGKNLVYSAPTSAGKTLVAELLILKRVL 133 Query 66 ETLKD 70 ET K Sbjct 134 ETRKK 138 >sp|Q7SCC1|DCL2_NEUCR Dicer-like protein 2 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=dcl-2 PE=2 SV=4 Length=1534 Score = 72.5 bits (176), Expect = 1e-11, Method: Composition-based stats. Identities = 49/292 (17%), Positives = 91/292 (31%), Gaps = 21/292 (7%) Query 332 QLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI 391 + LE +D V TP ++++ LV+ D +D + R Sbjct 239 DIEKLEQVLDAVCRTP---TIHREELLAHVNRPEMLVVSYGDSGTDPTPTDLMTRFLEAY 295 Query 392 PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT--WVDLKGEDSVPDTVHHVVVP-- 447 K V++ A +KL + I T +L+G + V + P Sbjct 296 -HRLDISKDPDVLLLKAQRTERAREKLRQMITKKDTLAQKELRGVYNRALLVRREIGPWA 354 Query 448 ----VNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE 503 + + L + + + R K + ++ + Sbjct 355 ADYYLTRTVSHMLAELERGEPPAQHRYIGEALRSIPIPAISKEPIQLSPKVQTLLKVLAS 414 Query 504 HKMDQA-IIFCRTKIDCDNLEQYFIQQGGGPDK--KGHQFSCVCL------HGDRKPHER 554 H+ D I+F + ++ + D+ + H D E Sbjct 415 HQQDPVGIVFVKERVMVSIVTHIISTHPLTKDRYRTASMIGTASVPGKARNHMDMTKKED 474 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 +LE F+ G L+ T V GID+ VI P ++++ R GR Sbjct 475 MTSLEGFRLGRFNLLVATSVLEEGIDVPICNLVICFDEPSNIKSFIQRRGRA 526 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 19/87 (22%), Positives = 36/87 (41%), Gaps = 10/87 (11%) Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGV---AARDQL--SVLENGVDIVVGT 346 + P+ LA Q ++ P ++ +++ G + +Q + V IVV T Sbjct 114 LTPTVALARQQHRVLQS-----QIPSVKAIMLCGQDGVDSWSEQAVWDAVLLNVRIVVST 168 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEAD 373 L D + + L + +V+DEA Sbjct 169 YQILFDANAHSFVRLDSLSLIVIDEAH 195 >sp|Q5UYM9|HELS_HALMA ATP-dependent DNA helicase Hel308 OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) OX=272569 GN=hel308 PE=3 SV=1 Length=799 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 72/449 (16%), Positives = 140/449 (31%), Gaps = 45/449 (10%) Query 249 FPPKDGFV--ALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK---ALIVEPSRELAEQTL 303 +PP+ V +++ + SG + + L + + AL + P R LA + Sbjct 26 YPPQAEAVEAGVTEGENLVASIPTASGKTLIAELAMLSSVARGGKALYIVPLRALASEKQ 85 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 + ++F++Y + + + L + DIVV T ++D LV + Sbjct 86 ADFEEFEQYGLDIGVSTG------NYESEGGWLADK-DIVVATSEKVDSLVRNDAPWIED 138 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFD-VKKLSEKI 422 + +V DE + + ++ ++ D LQ + SAT+ + + + + Sbjct 139 LTCVVTDEVHLVDDGERGPTLEVTLAKLRRLNPD---LQTVALSATIGNAEALATWLDAG 195 Query 423 MHFPTWVDLKGEDSVP-DTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 + W + + V H+ + + I D + +T NS Sbjct 196 LVDSDWRPIDLQKGVHYGQALHLEDGSQQRLSVQNNEKQTAAIVRDTLEDDGSTLVFVNS 255 Query 482 PEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFS 541 A L E + A I + + + Sbjct 256 RRNAEAAAGRLANTVRPHLSTEERDQLADI-------AEEIRDVSDTETSDDLADAVADG 308 Query 542 CVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG----VPYVINVT------ 591 H R+ + F+ V+ + T A G++ V Sbjct 309 AAFHHAGLSRGHRELVEDAFRDRLVKVVCATPTLAAGVNTPSRRVVVRDWRRYDGSAGGM 368 Query 592 LPDEKQNYVHR-IGRVGRAERM--GLAISLVATEKE-------KVWYHVCSSRGKGCYNT 641 P VH+ +GR GR G A+ + ++ E VW R K Sbjct 369 APLSVLE-VHQMMGRAGRPGLDPYGEAVLIASSHDEVDELFERYVWADPEPVRSKLAAEP 427 Query 642 RLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 L+ T+ + + E L T+ Sbjct 428 ALRTHILATVASGFARSRKGLLEFLEQTL 456 >sp|Q8F8A9|UVRB_LEPIN UvrABC system protein B OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=uvrB PE=3 SV=1 Length=666 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 117/363 (32%), Gaps = 69/363 (19%) Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 P L D L L++DE+ + I M D R Q +V Sbjct 321 PACLIDYFQGEFL-------LIVDESHVTI-----PQIGGMF------AGDRARKQTLV- 361 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 F + L + + P + E P T++ P + ++ + + + T Sbjct 362 -----DFGFR-LPSALDNRPLNFQ-EFETLTPRTLYVSATPAEYEIEKSSKVVEQIIRPT 414 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + + RP N E I+ ++ ++ TK ++L Y+ Sbjct 415 GLLDPIVDVRPTKNQIEDLLVEIRKRIDA----------GERVLVTTLTKKMSEDLTDYY 464 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G LH + + +R + +KG LI ++ G+DI V Sbjct 465 EEIG---------LKVAYLHSEVETLDRVGIIRDLRKGIYDVLIGINLLREGLDIPEVSL 515 Query 587 VINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK----- 636 V + ++ + IGR R G AI + + + ++ + Sbjct 516 VAILDADKEGFLRNYKSLIQTIGRAAR-NVNGTAILYADKTTDSMAKAIEETKRRRKIQE 574 Query 637 ------GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTY 690 G +K++ G I E + SE + + VE K +F K Sbjct 575 DHNLKFGITPLTIKKEVGDIIEREEKERTSE-----DLVLEDVEK--KFNSKKFPNKEVL 627 Query 691 GQK 693 +K Sbjct 628 KEK 630 >sp|Q72N95|UVRB_LEPIC UvrABC system protein B OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=uvrB PE=3 SV=1 Length=666 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 63/363 (17%), Positives = 117/363 (32%), Gaps = 69/363 (19%) Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 P L D L L++DE+ + I M D R Q +V Sbjct 321 PACLIDYFQGEFL-------LIVDESHVTI-----PQIGGMF------AGDRARKQTLV- 361 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 F + L + + P + E P T++ P + ++ + + + T Sbjct 362 -----DFGFR-LPSALDNRPLNFQ-EFETLTPRTLYVSATPAEYEIEKSSKVVEQIIRPT 414 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + + RP N E I+ ++ ++ TK ++L Y+ Sbjct 415 GLLDPIVDVRPTKNQIEDLLVEIRKRIDA----------GERVLVTTLTKKMSEDLTDYY 464 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G LH + + +R + +KG LI ++ G+DI V Sbjct 465 EEIG---------LKVAYLHSEVETLDRVGIIRDLRKGIYDVLIGINLLREGLDIPEVSL 515 Query 587 VINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGK----- 636 V + ++ + IGR R G AI + + + ++ + Sbjct 516 VAILDADKEGFLRNYKSLIQTIGRAAR-NVNGTAILYADKTTDSMAKAIEETKRRRKIQE 574 Query 637 ------GCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTY 690 G +K++ G I E + SE + + VE K +F K Sbjct 575 DHNLKFGITPLTIKKEVGDIIEREEKERTSE-----DLVLEDVEK--KFNSKKFPNKEVL 627 Query 691 GQK 693 +K Sbjct 628 KEK 630 >sp|Q6CQX2|MPH1_KLULA ATP-dependent DNA helicase MPH1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=MPH1 PE=3 SV=2 Length=1002 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 37/87 (43%), Gaps = 1/87 (1%) Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRV 606 ++K+ + FKKG L+CT + G+DI V +I + R+GR Sbjct 563 SGMNQKQQKKVISDFKKGIYNVLVCTSIGEEGLDIGEVDLIICFDSTSSPIKNIQRMGRT 622 Query 607 GRAERMGLAISLVATEKEKVWYHVCSS 633 GR R G + L + ++ + + Sbjct 623 GRK-RDGRIVLLFSGNEKFKFEQAMND 648 Score = 37.4 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 18/86 (21%), Positives = 35/86 (41%), Gaps = 7/86 (8%) Query 290 LIVEPSREL-AEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPG 348 + P+R L A+Q + + + L+ R+++ + + TP Sbjct 148 IFTAPTRPLVAQQIKACLGITGIPYSDTAI---LLDKSRKNREEIWQQKR---VFFTTPQ 201 Query 349 RLDDLVSTGKLNLSQVRFLVLDEADG 374 +++ + G LN V LV+DEA Sbjct 202 VVENDLKRGVLNPKDVVLLVIDEAHR 227 >sp|Q042E2|UVRB_LACGA UvrABC system protein B OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243 / BCRC 14619 / CIP 102991 / JCM 1131 / KCTC 3163 / NCIMB 11718 / NCTC 13722 / AM63) OX=324831 GN=uvrB PE=3 SV=1 Length=671 Score = 71.7 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 91/297 (31%), Gaps = 29/297 (10%) Query 408 ATLHSFDV----KKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 AT+ ++ + + D+ P + VN Sbjct 347 ATMPELKAMYNGDSARKQTLIDYGFRLPSALDNRPLKLEEFEKHVNQIMYVSATPGDYEL 406 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKE-HKMDQAIIFCRTKIDCDNL 522 +TD + G PE+ IK + K + ++ + TK ++L Sbjct 407 NQTDHKVEQIIRPTGLLDPEIEVRPIKGQIDDLVGEINKRIDRNERVFVTTLTKKMAEDL 466 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIH 582 Y G LH D K ER + + + G LI ++ GID+ Sbjct 467 TDYLKDLG---------IKVRYLHSDIKTLERLEIIRDLRLGKFDVLIGINLLREGIDVP 517 Query 583 GVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKG 637 V V + + V IGR R G I + + + + ++ + Sbjct 518 EVSLVAILDADKEGFLRSTRPLVQTIGRAAR-NSNGKVIMYADSITDSMREAIDATERRR 576 Query 638 CYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIK-----VPVDEFDGKVT 689 + ++ G T ++ I + ++ T E + K + DE K Sbjct 577 SLQMKFNKEHGITP----KTIVKPIRDVISITKDSDEKENKESFADLNFDELTKKQK 629 >sp|Q9CWU0|TDR12_MOUSE Putative ATP-dependent RNA helicase TDRD12 OS=Mus musculus OX=10090 GN=Tdrd12 PE=1 SV=2 Length=1215 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 60/358 (17%), Positives = 118/358 (33%), Gaps = 31/358 (9%) Query 210 KDLGLAFE--IPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIV 267 +D+ +A E IPP + FP ++ ++ + Sbjct 409 EDMKVAMEEMIPPEALQRNKFP-----GPSHTASYSWPPIARGCDMVVISHCGNDPLLYL 463 Query 268 KSQHSGNAQVTQTKFLP--NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLI-I 324 + K LP N P A+IV P + A+ + + + + L +L+ I Sbjct 464 PPLLTILQMGGCYKSLPSRNGPLAVIVCPGWKKAQFIFELLGDYS--MSSRPLHPVLLTI 521 Query 325 GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFI 384 G + L G D++V TP L L++ L ++ LVLDE +L ++ + Sbjct 522 GLHKDEAKNMKLPRGCDVIVTTPHSLLRLLTYRSLLFLRLCHLVLDEVH-MLFFEANEQM 580 Query 385 NRMHNQIPQVTSDGKR----LQVIVCSATLHSFDVKKLSEKIMHFP-TWVDLKGEDSVPD 439 + + + +R Q++ + + L + M P + E ++ Sbjct 581 FAILDNFKKNVEVEERESAPHQIVAVGVHWNKH-IDHLVREFMKDPCVVITALEEAALYG 639 Query 440 TVHHVVVPVN--PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYA 497 +V VV KT L + L + + + S A + K + Sbjct 640 SVQQVVHLCLECEKTSTLLQVLDFVPSQAQKTLIFTCSVAETETVCKGSPAEQGDKKTKS 699 Query 498 VRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERK 555 V + E R + +Y + + ++F+ L R+ Sbjct 700 VLLLTE----------RNASHAVGILRYLERADAKIPSELYEFTAGVLEAKEDKKARR 747 >sp|Q1DY43|MPH1_COCIM ATP-dependent DNA helicase MPH1 OS=Coccidioides immitis (strain RS) OX=246410 GN=MPH1 PE=3 SV=1 Length=1110 Score = 72.1 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 9/166 (5%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGG--GPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGD 565 + +IF + + + + + P Q + G + + + +FK G Sbjct 698 RVMIFSHFRDSAEEIVRVLRKHQPFVRPHVFVGQANAKGSEG-MDQKTQLEVVGKFKTGT 756 Query 566 VRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEK 625 ++ T + G+DI V +I + R+GR GR R G I L++ KE+ Sbjct 757 YNTIVATSIGEEGLDIGEVDLIICYDGHSSPIRMLQRMGRTGRK-RAGNIILLLSKGKEE 815 Query 626 VWYHVCSSRGKGCYN-----TRLKEDGGCTIWYNEMQLLSEIEEHL 666 Y + +R + + E EE + Sbjct 816 ESYSKAKDSYEKMQQLIASGSRFTFHTDKSSRIVPQDIQPEAEEKM 861 Score = 42.8 bits (99), Expect = 0.013, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 4/87 (5%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP 347 + + V P++ L Q ++ P+ + L+ G + + + TP Sbjct 369 QIVFVAPTKPLVSQQVDACFHIA---GIPRSQTTLLTGNTPPGVRAEEWRSK-RVFFMTP 424 Query 348 GRLDDLVSTGKLNLSQVRFLVLDEADG 374 + + + TG + ++ LV+DEA Sbjct 425 QTIMNDLKTGIADPKRIVLLVVDEAHR 451 >sp|Q7VLL3|UVRB_HAEDU UvrABC system protein B OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) OX=233412 GN=uvrB PE=3 SV=1 Length=675 Score = 71.7 bits (174), Expect = 1e-11, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 105/321 (33%), Gaps = 41/321 (13%) Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L + + P + + E P T++ P N + ++ I V Sbjct 370 RLPSALDNRPLKFE-EFERLSPQTIYVSATPGNYELEK-----SNGDIIDQVVRPTGLLD 423 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 P + S+ +L A+ E + +I TK ++L Y + G Sbjct 424 PIIEVRPVASQVDDVLSEIQQRVALDE----RVLITTLTKKMAEDLTDYLDEHG------ 473 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT----- 591 LH D ER + + + G L+ ++ G+D+ V V + Sbjct 474 ---VRVRYLHSDIDTVERVEIIHDLRIGMFDVLVGINLLREGLDMPEVALVAILDADKEG 530 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 + + + IGR R G AI + S K T + + Sbjct 531 FLRSESSLIQTIGRAAR-NLNGKAILYAD--------RITHSMQKAITETERRREKQQK- 580 Query 652 WYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPT 711 YN+ + I + LN + ++ + + + K K A SY + Sbjct 581 -YNQEHNI--IPQALNKKVREL---LDIGQTDKQKKGKQAVKIAEQSASYTPNAPKSRQA 634 Query 712 VQ-ELAALEKEAQTSFLHLGY 731 ++ EL L ++ Q L + Sbjct 635 LEKELKQLTQQMQKLAKDLEF 655 >sp|A1CBC9|DCL1_ASPCL Dicer-like protein 1 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=dcl1 PE=3 SV=2 Length=1534 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 50/256 (20%), Positives = 85/256 (33%), Gaps = 17/256 (7%) Query 421 KIMHFPTWVDLKGEDSVPDT---VHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 + W+ +D +P V+ + T+R + I+ K +T Sbjct 379 RWCSDRAWLYALADDVLPKLEGHVNKLAESTAAATERDMAFKEITLIKEASNIVKAHTFN 438 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 P S +++L+ E + + IIF + + L + F + G Sbjct 439 DPEFPGELSPKVRLLQTELSKHF-SHAPETKCIIFTQKRYTAKTLHELFTILSIPHLRPG 497 Query 538 HQFSCVC-LHGDRKPHERKQNLE--RFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD 594 G R+Q L +F+KG++ L T VA G+DI V+ L Sbjct 498 VLIGVRSGDIGGMNITFRQQFLALVKFRKGEINCLFATSVAEEGLDIPDCNLVVRFDLYH 557 Query 595 EKQNYVHRIGRVGRAERMGLAISLVATEKE------KVWYHVCSSRGKGCYNTRLKEDGG 648 YV GR R A S+V + + + C L ED Sbjct 558 TLIQYVQSRGR-ARHYHSTYA-SMVEKDNSDHEARLREVREAEKTMQNFCE--TLPEDRI 613 Query 649 CTIWYNEMQLLSEIEE 664 +++ L + EE Sbjct 614 LHGNDHDLDSLLQHEE 629 >sp|Q9VUV9|U520_DROME U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Drosophila melanogaster OX=7227 GN=Brr2 PE=2 SV=4 Length=2142 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 62/436 (14%), Positives = 143/436 (33%), Gaps = 52/436 (12%) Query 254 GFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYI 313 K + + G K + V P + L + F + + Sbjct 503 APTGAGKTNVALLTMMREIGKHINEDGTINAQDFKIIYVAPMKSL---VQEMVGNFGRRL 559 Query 314 DNPKLRELLIIGGVAA-RDQLSVLENGVDIVVGTPGRLDDLVSTG---KLNLSQVRFLVL 369 L + G R+Q++ ++V TP + D+++ + +S VR +++ Sbjct 560 ACYNLTVSELTGDHQLTREQIAA----TQVIVCTPEK-WDIITRKGGERTFVSLVRLVII 614 Query 370 DEADGLLSQGYSDFINRMH-NQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTW 428 DE LL + + I + + + ++++ SATL ++ + ++ + P Sbjct 615 DEIH-LLHDERGPVLEALVARTIRNIETTQEEVRLVGLSATLPNY--QDVATFLRVKPDK 671 Query 429 VDLKGEDSV-PDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 ++S P ++ + V K + L + + + V+ K G N ++ Sbjct 672 GLFYFDNSYRPVSLEQQYIGVTEK-----KALKRFQVMNEIVYEKTMEHAGRNQVLVFVH 726 Query 488 AIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLH- 546 + K + D F + + + +Q + K +H Sbjct 727 SRKETGKTARAVRDMCLEQDTLGSFLKEGSASMEVLRTEAEQVKNTELKELLPYGFAIHH 786 Query 547 GDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN----VTLPD------EK 596 +R + F ++ L+ T A G+++ +I Sbjct 787 AGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSA 846 Query 597 QNYVHRIGRVGR--AERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYN 654 + + +GR GR + G I + + + + + + + Sbjct 847 LDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQ-----------------LPI 889 Query 655 EMQLLSEIEEHLNCTI 670 E Q +S++ + LN I Sbjct 890 ESQFISKLPDMLNAEI 905 >sp|Q8AA95|UVRB_BACTN UvrABC system protein B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=uvrB PE=3 SV=1 Length=677 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 49/264 (19%), Positives = 86/264 (33%), Gaps = 33/264 (13%) Query 431 LKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIK 490 LK E+ T + V P +E + I + V I Sbjct 375 LKFEEFEEMTKQVIYVSATPAE---YELIQSEGIVVEQVIRPTGLLDPVIEVRPSLNQID 431 Query 491 ILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRK 550 L E +R KE ++ ++ TK + L +Y + + C +H D Sbjct 432 DLMEEIQLRIEKE---ERVLVTTLTKRMAEELTEYLLN---------NNVRCNYIHSDVD 479 Query 551 PHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV--HRI----- 603 ER + ++ ++G LI ++ G+D+ V V + +K+ ++ HR Sbjct 480 TLERVKIMDDLRQGVYDVLIGVNLLREGLDLPEVSLVAILD--ADKEGFLRSHRSLTQTA 537 Query 604 GRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLL---- 659 GR R G I + + + + + E G T + Sbjct 538 GRAAR-NVNGKVIMYADKITDSMRLTIDETNRRREKQLAYNEANGITPQQIKKARNLSVF 596 Query 660 ----SEIEEHLNCTISQVEPDIKV 679 SE +E L + VEP Sbjct 597 GSPGSEADELLKEKHAYVEPSSPN 620 >sp|D4A2Z8|DHX36_RAT ATP-dependent DNA/RNA helicase DHX36 OS=Rattus norvegicus OX=10116 GN=Dhx36 PE=1 SV=1 Length=1000 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 57/336 (17%), Positives = 105/336 (31%), Gaps = 55/336 (16%) Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G R Q + I+ T G + + + LS V +VLDE + + Sbjct 283 GYQIRLQSRLPRKQGSILYCTTGIILQWLQSDS-RLSSVSHIVLDEIH---ERNLQSDV- 337 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFD------------------------VKKLSEK 421 + I + L+VI+ SATL++ ++ + EK Sbjct 338 -LMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 396 Query 422 IMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANS 481 I +FP + V K ++ + ++ + + Sbjct 397 IRYFPE--QKEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWPAYIKELQTRYSASTIDVL 454 Query 482 PEMWSEAIKI-LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 M + + + L + E + ++F + L + Q K +F Sbjct 455 EMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQ---VMFKSDRF 511 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI--------NVTL 592 + LH + Q ++ G + +I T++A I I V YVI + Sbjct 512 LIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDT 571 Query 593 PDEKQN----YV------HRIGRVGRAERMGLAISL 618 + +V R GR GR + G L Sbjct 572 QNNISTMSAEWVSKANAKQRKGRAGRV-QPGHCYHL 606 >sp|O51528|RECG_BORBU ATP-dependent DNA helicase RecG OS=Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31) OX=224326 GN=recG PE=3 SV=1 Length=686 Score = 71.3 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 62/421 (15%), Positives = 137/421 (33%), Gaps = 83/421 (20%) Query 203 VKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAP 262 ++F + + F + L L F E++ + F S P Sbjct 228 LQFFSRYRSSKILFREKKDLSKDLLEKVVS----SLPFELTEDQKISIDEIFFDLNSSKP 283 Query 263 DGYIVK-SQHSGNAQVTQTKFLP---NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKL 318 +++ SG V LP + + P+ LA Q +N+ + + Sbjct 284 MNRLLQGDVGSGKTLVALLSGLPLIEAGYQVAFMAPTDLLARQHYDNLSNILAPFN---I 340 Query 319 RELLIIGGVAARDQLSVLENGVD----IVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADG 374 L+ G + +D+ LE+ + ++VGT + ++ ++++DE Sbjct 341 SMTLLTGSLRKKDKEQALESIRNGTSGLIVGT-----HAIFYESTEFKRLAYVIIDEQHK 395 Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 + + + G+ + +++ SAT L+ +++ + Sbjct 396 FGVVQREE-----------LKNKGEGVDMLLMSATPIPRSFA-LTLFGDLEVSFIKTLPK 443 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 +P T + + D+++E L K ++ V+ + E+ LK Sbjct 444 GRLPIT---TYLARHGNEDKVYEFLRKELLKGHQVYFVYPLISSSEKFELKDVNNMCLKL 500 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + +F ++ LH + Sbjct 501 KE--------------VF-------------------------GEYVVDMLHSKLPSDLK 521 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY----VHRI-GRVGRA 609 ++ ++ F V L+ T V GID ++ + + + +H+I GRVGR+ Sbjct 522 EEIMKNFYSKKVDILVATSVIEVGIDCPNATCMVV----EHAERFGLSTLHQIRGRVGRS 577 Query 610 E 610 Sbjct 578 N 578 >sp|C4K6N8|UVRB_HAMD5 UvrABC system protein B OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) OX=572265 GN=uvrB PE=3 SV=1 Length=671 Score = 71.3 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 62/370 (17%), Positives = 121/370 (33%), Gaps = 80/370 (22%) Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI-- 404 P L D + + L LV+DE+ + I M+ D R Q + Sbjct 322 PPTLFDYLPSEGL-------LVIDESHVTI-----PQIGGMYK------GDRSRKQTLVE 363 Query 405 ----VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 + SA L + M F + E P T++ P + + L Sbjct 364 YGFRLPSA---------LDNRPMRFEEF-----ESLAPQTIYISATPGPYELGKSAGELI 409 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCD 520 + +R + P + ++ +L I E + ++ TK + Sbjct 410 EQVVRPTGL-----LDPVIEVRPVATQVDDLLSEIRQRVVIDE----RVLVTTLTKRMAE 460 Query 521 NLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGID 580 +L +Y +QG LH D ER + + + G+ L+ ++ G+D Sbjct 461 DLTEYLAEQGE---------RVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLD 511 Query 581 IHGVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISL-----------VATEKE 624 + V V + +++ + IGR R G AI + + Sbjct 512 MPEVSLVAILDADKEGFLRSERSLIQTIGRAAR-NLNGKAILYGDKITVSMKKAIDETER 570 Query 625 KVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE-------MQLLSEIEEHLNCTISQVEPDI 677 + ++ KG +L++ + + + + +EE+ + I Sbjct 571 RRKKQESYNKEKGIVPKKLEKKIRDILELGQSYTKGKARKRTTTLEENSTNYTALSPKAI 630 Query 678 KVPVDEFDGK 687 K +DE + K Sbjct 631 KKKIDELEQK 640 >sp|P53327|SLH1_YEAST RQC trigger complex helicase SLH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SLH1 PE=1 SV=2 Length=1967 Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 55/316 (17%), Positives = 110/316 (35%), Gaps = 18/316 (6%) Query 278 TQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLE 337 + + K + V P + LA + ++ +F K + ++ + G + +L Sbjct 338 NEIDIQYDDFKVIYVAPLKALAAEIVD---KFSKKLAPFNIQVRELTGDMQLTK-AEILA 393 Query 338 NGVDIVVGTPGRLDDLVSTGKLN----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQ 393 ++V TP + D+V+ +S+V+ L++DE L S + + Q Sbjct 394 T--QVIVTTPEK-WDVVTRKANGDNDLVSKVKLLIIDEVHLLHEDRGSVIETLVARTLRQ 450 Query 394 VTSDGKRLQVIVCSATLHS-FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 V S +++I SATL + DV ++ + + P + ++ K Sbjct 451 VESSQSMIRIIGLSATLPNFMDVADF--LGVNRQIGMFYFDQSFRPKPLEQQLLGCRGKA 508 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 R K +I ++ + K + +F Sbjct 509 G---SRQSKENIDKVAYDKLSEMIQRGYQVMVFVHSRKETVKSARNFIKLAESNHEVDLF 565 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 I+ D + ++ K+ QF H +R + FK G ++ L CT Sbjct 566 APDPIEKDKYSRSLVKNRDKDMKEIFQFGFGIHHAGMARSDRNLTEKMFKDGAIKVLCCT 625 Query 573 DVAARGIDIHGVPYVI 588 A G+++ VI Sbjct 626 ATLAWGVNLPA-DCVI 640 Score = 65.9 bits (159), Expect = 1e-09, Method: Composition-based stats. Identities = 66/429 (15%), Positives = 144/429 (34%), Gaps = 47/429 (11%) Query 228 FPACVLKNAELKFNFGEEEFKFPPKDGFVAL-SKAPDGYIVKSQHSGNAQVTQTKFLP-- 284 P L+N ++ + + F F L + + ++ SG V + Sbjct 1121 LPTSALQNPLIESIYPFKYFNPMQTMTFYTLYNTNENAFVGSPTGSGKTIVAELAIWHAF 1180 Query 285 ---NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVD 341 K + + P + L + +++ ++ K + + + G V Sbjct 1181 KTFPGKKIVYIAPMKALVRERVDDWRK--KITPVTGDKVVELTGDSLPDP------KDVH 1232 Query 342 ---IVVGTPGRLDDLVST--GKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 IV+ TP + D + + + V +++DE LL+ + + +++ ++S Sbjct 1233 DATIVITTPEKFDGISRNWQTRKFVQDVSLIIMDEIH-LLASDRGPILEMIVSRMNYISS 1291 Query 397 DGKRLQVI--VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDR 454 K+ + + +A +++D+ H L S V + + Sbjct 1292 QTKQPVRLLGMSTAVSNAYDMAGWLGVKDH-----GLYNFPSSVRPVPLKMYIDGFPDNL 1346 Query 455 LWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCR 514 + L K+ + + K ++ + S L + + F Sbjct 1347 AFCPLMKTMNKPVFMAIKQHSPDKPALIFVASRRQTRLTALDLIHLCGMEDNPRR--FLN 1404 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDV 574 D + L+ Y Q K QF H +R + + F+K ++ LI T Sbjct 1405 I-DDEEELQYYLSQVTDDTLKLSLQFGIGLHHAGLVQKDRSISHQLFQKNKIQILIATST 1463 Query 575 AARGIDIHGVPYVI---NV---------TLPDEKQNYVHRIGRVGR--AERMGLAISLVA 620 A G+++ +I + + + + +GR GR + G AI Sbjct 1464 LAWGVNLPAHLVIIKGTQFFDAKIEGYRDM--DLTDILQMMGRAGRPAYDTTGTAIVY-T 1520 Query 621 TEKEKVWYH 629 E +K++Y Sbjct 1521 KESKKMFYK 1529 >sp|Q0UI93|DCL1_PHANO Dicer-like protein 1 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=DCL1 PE=3 SV=2 Length=1522 Score = 71.7 bits (174), Expect = 2e-11, Method: Composition-based stats. Identities = 55/334 (16%), Positives = 117/334 (35%), Gaps = 19/334 (6%) Query 387 MHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLS-EKIMHFPTWVDLKGEDSVPDTVHHVV 445 +H ++ D + + +A LH+ ++ + + + F + + + + + + Sbjct 300 LHQKVKAKYGDVAPFRKLFITAKLHASELGRWASDMYWSFAFADEQSRKLQIREELKYNR 359 Query 446 VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHK 505 + L ++ + T V + P + ++ S+ +K+ + Sbjct 360 SKRDWSAAELDAQMARLKEATAFVQQYEIGAPTLSEQDLSSKVMKLQYWLNLYY--ERTT 417 Query 506 MDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNL--ERFKK 563 + + I+F + L+ F GG G+ R Q L ++F++ Sbjct 418 LARCIVFVEKRHTAQLLKLIFDHIGGPNLHCDVLVGINNRAGEENVSLRSQILTLQKFRR 477 Query 564 GDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEK 623 G++ L T VA G+DI V+ L YV GR R R + ++ E Sbjct 478 GELNCLFATSVAEEGLDIPQCNLVVRFDLYRTMIGYVQSRGR-ARH-RNSKYLHMLEAEN 535 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDE 683 ++ + ++R C ++ Q L ++E+ I+ + DE Sbjct 536 KEHTERLMNARHDENIMREF-----CKDLTHDRQ-LGDVEQEKAELIALEDKLFPSYTDE 589 Query 684 FDG-KVTYGQKRAAGG-----GSYKGHVDILAPT 711 G K+TY + H + PT Sbjct 590 KSGAKLTYRSSLSILSHFVATYPSPDHNTMAQPT 623 >sp|Q8DHC6|UVRB_THEVB UvrABC system protein B OS=Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1) OX=197221 GN=uvrB PE=3 SV=1 Length=668 Score = 71.3 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 36/193 (19%), Positives = 71/193 (37%), Gaps = 19/193 (10%) Query 494 GEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHE 553 Y ++ + ++ ++ TK ++L +YF ++G LH + E Sbjct 433 DLYGEIRLRCDRQERVLVTTLTKRMAEDLTEYFQERG---------VRVRYLHSEINAIE 483 Query 554 RKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNY-------VHRIGRV 606 R + LE ++GD LI ++ G+D+ V V + +K+ + + IGR Sbjct 484 RIEILEALRQGDFDVLIGVNLLREGLDLPEVSLVAILD--ADKEGFLRAERSLIQTIGRA 541 Query 607 GRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL 666 R R G AI T E + + + + + G + + I L Sbjct 542 ARHVR-GQAILYADTLTESMQKAIQETERRRAIQLAYNQAHGIIPQPIVKKTSNAILAFL 600 Query 667 NCTISQVEPDIKV 679 + + + V Sbjct 601 DVSRRLNAESVPV 613 >sp|O67708|UVRB_AQUAE UvrABC system protein B OS=Aquifex aeolicus (strain VF5) OX=224324 GN=uvrB PE=3 SV=1 Length=663 Score = 71.3 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 84/260 (32%), Gaps = 28/260 (11%) Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 + + ++ P + + +R + + T + RP N E + IK +K Sbjct 387 ERINQVIYVSATPGDWELERSEAVVEQIVRPTGLLDPVVEVRPKMNQLENLVKEIKEVKK 446 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + ++A++ TK + + Y ++ + +H + ER Sbjct 447 ----------RKERALVLTTTKRLAEEIADYLTER---------KIRAKYMHSELDAIER 487 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRA 609 Q + ++G + ++ ++ G+D+ V V + Q + IGR R Sbjct 488 AQLIRELREGSIDVIVGVNLLREGLDLPEVSLVAIMDADKEGFLRSYQALIQTIGRAAR- 546 Query 610 ERMGLAISL---VATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHL 666 G AI + EK R + +I +LL+ E Sbjct 547 NIHGKAILYADRITKAMEKAIQETQRRRKIQEEFNKKHGITPKSIKKPVKELLAIEELDY 606 Query 667 NCTISQVEPDIKVPVDEFDG 686 ++ +K D Sbjct 607 VSVPEELPKGVKSEEDILKK 626 >sp|Q815I3|UVRB_BACCR UvrABC system protein B OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=uvrB PE=3 SV=1 Length=658 Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 61/348 (18%), Positives = 112/348 (32%), Gaps = 53/348 (15%) Query 345 GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI 404 TP L D L +V+DE+ + + M+N D R QV+ Sbjct 320 ATPYTLLDYFPKDFL-------IVMDESHVSV-----PQVRAMYN------GDQARKQVL 361 Query 405 VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHI 464 V + L + + P D + E+ ++ P + ++ E + + Sbjct 362 V------DHGFR-LPSALDNRPLTFD-EFEEKTNQVIYVSATPGPYELEQSPEVIEQIIR 413 Query 465 RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ 524 T + + RP I L GE R K ++ +I TK ++L Sbjct 414 PTGLLDPPIDIRPIEGQ-------IDDLLGEIQDRIAKN---ERVLITTLTKKMSEDLTD 463 Query 525 YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGV 584 Y G LH + K ER + + + G L+ ++ G+DI V Sbjct 464 YLKDVG---------IKVTYLHSEIKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPEV 514 Query 585 PYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY 639 V + +++ + IGR R G I + + + ++ + Sbjct 515 SLVAILDADKEGFLRSERSLIQTIGRAAR-NENGRVIMYADRITKSMGIAIEETKRRRSI 573 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGK 687 E+ G T + + I ++E P + K Sbjct 574 QEAYNEEHGITPKTIQKGVRDVI--RATTAAEEIETYEATPAKKMTKK 619 >sp|Q92H58|MFD_RICCN Transcription-repair-coupling factor OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=mfd PE=3 SV=1 Length=1122 Score = 71.3 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 66/420 (16%), Positives = 136/420 (32%), Gaps = 74/420 (18%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 + F++ + K A FP ++ + N +E+ + + G + Sbjct 561 VEFDLEEYDKFCANFPFSETEDQLIAINDIKEDLRNGMLMDRLICGDVGFGKTEVAMR-A 619 Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQL 333 V ++ + P+ +V P+ L Q + + K + +I A+ Sbjct 620 VFMVAKS-LNEHLPQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSSVISSKEAKIIR 678 Query 334 SVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIP 392 S LE+G ++I++GT + + ++ L++DE + G +F+ + + Sbjct 679 SELESGKINIIIGT-----HSLLHKNIKFFNLKLLIIDE-EQHFGVGQKEFLKSLKS--- 729 Query 393 QVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKT 452 V+ SAT +P T+ + + + Sbjct 730 -------SSHVLAMSAT--------------------------PIPRTLQMSMTGLKELS 756 Query 453 DRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF 512 L + + T + A E + + ++ Sbjct 757 IIATPPLNRLEVHTSVMPYDPVIIRDALLREHF-------------------RGGRSFYV 797 Query 513 CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICT 572 D +++ + Q K +G P + + + F G L+ T Sbjct 798 VPRIKDIEDIAKQLKQIVPELSYKIA-------YGKMTPSKIDEVMSEFYAGKFDILVST 850 Query 573 DVAARGIDIHGVPYVI--NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 + GIDI +I N + Q Y R GR+GR + G A VA+ K+ + + Sbjct 851 TIIESGIDIAEANTMIIHNADMLGLSQLYQLR-GRIGRGKMRGYAYLTVASHKKMTSHSL 909 >sp|Q821H8|UVRB_CHLCV UvrABC system protein B OS=Chlamydia caviae (strain ATCC VR-813 / DSM 19441 / 03DC25 / GPIC) OX=227941 GN=uvrB PE=3 SV=1 Length=656 Score = 70.9 bits (172), Expect = 2e-11, Method: Composition-based stats. Identities = 44/335 (13%), Positives = 100/335 (30%), Gaps = 54/335 (16%) Query 367 LVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVI------VCSATLHSFDVKKLSE 420 LV+DE+ L I M+ D R Q + + SA + + ++ Sbjct 330 LVIDESHQTL-----PQIRAMYR------GDLSRKQSLVEYGFRLPSAYDNRPLTYEEAQ 378 Query 421 KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 K H +V ++ +N + E++ + D + Sbjct 379 KYFHNVIYVSATPGET----------ELNESQGHIVEQIIRPTGIPDPI----------- 417 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 PE+ ++ +R ++ ++ TK +++ + + Sbjct 418 -PEIRPATGQVDDLLEEIRKRLSKSQEKILVISITKKLAEDIAAFLSEL---------DI 467 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT-----LPDE 595 + LH + ER + L + G++ LI ++ G+D+ V V + Sbjct 468 AAAYLHSGIETAERTRILADLRLGNIDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRS 527 Query 596 KQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNE 655 + + GR R G I + + + + + + T Sbjct 528 TSSLIQFCGRAAR-NVEGKVIFYADQKTRSIEQTLKETERRRQIQLDYNKANNITPKPII 586 Query 656 MQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTY 690 + + SQ + + E + + Sbjct 587 KAIFANPIPQGGKKESQEPAKTPLSIKELEKLIKK 621 >sp|Q1MTR1|IRC3_SCHPO Putative mitochondrial ATP-dependent helicase irc3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=irc3 PE=3 SV=2 Length=606 Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 107/327 (33%), Gaps = 49/327 (15%) Query 283 LPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDI 342 PN+ + LI+ +ELA Q L + ++ P + +G A D+ Sbjct 74 RPNSEQCLILVHRKELALQALKHCRE-----SLPNKSIEIDMGNQCASGLA-------DV 121 Query 343 VVGTPGRLDDLVSTGKLNLS--QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKR 400 V + + L + L + + L+ DE + S Y R+ S+ + Sbjct 122 TVAS---VFSLKNERLLKYNPLNFKLLIFDEVHHMASPSY----LRILEH-FGAESEKSK 173 Query 401 LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLG 460 + VI +ATL D K L+ D + + V+ D Sbjct 174 VNVIGLTATLFRADGKGLA----------------CGLDEIVYHRHFVDMIKDNWLVEPK 217 Query 461 KSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQ--AIIFCRTKID 518 +I+ ++ + ++ EA RA EH ++ ++FC Sbjct 218 VINIKWSTDLVLADSSSFLDQEKLKKEAQSEKAIFEIPRAWLEHASNRSSTLVFCINVEH 277 Query 519 CDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARG 578 + F + G L G+ ER+ ++ F+K L+ V G Sbjct 278 SLKVCNAFRKLG---------IDARALFGETNDSERETLIQDFRKKKFPVLVNCMVLTEG 328 Query 579 IDIHGVPYVINVTLPDEKQNYVHRIGR 605 DI + ++ IGR Sbjct 329 TDIPNIDCLMIARPTSSPNLLTQMIGR 355 >sp|Q7MM80|UVRB_VIBVY UvrABC system protein B OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=uvrB PE=3 SV=2 Length=676 Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 27/270 (10%) Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L + + P + + E P T+ P N + ++ + D V Sbjct 368 RLPSALDNRPLKFE-EFEALAPQTIFVSATPGNYELEKSAGEIA------DQVVRPTGLL 420 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 + + L E +RA+K+ ++ ++ TK ++L +Y + Sbjct 421 DPVLEVRPVATQVDDLLSEIRIRAVKD---ERVLVTTLTKRMAEDLTEYLHE-------- 469 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT----- 591 H LH D ER + + + G+ L+ ++ G+D+ V V + Sbjct 470 -HDVKVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEG 528 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 +++ + IGR R G AI + + + + + + E G Sbjct 529 FLRSERSLIQTIGRAAR-NLHGKAILYADSITKSMKKAMDETERRREKQQAYNEKMGIQP 587 Query 652 WYNEMQL--LSEIEEHLNCTISQVEPDIKV 679 + + + E+ + +V + + Sbjct 588 QALKRNIKDIMELGDITKSRKQKVSKTVPL 617 >sp|Q8D891|UVRB_VIBVU UvrABC system protein B OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=uvrB PE=3 SV=1 Length=676 Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 27/270 (10%) Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L + + P + + E P T+ P N + ++ + D V Sbjct 368 RLPSALDNRPLKFE-EFEALAPQTIFVSATPGNYELEKSAGEIA------DQVVRPTGLL 420 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 + + L E +RA+K+ ++ ++ TK ++L +Y + Sbjct 421 DPVLEVRPVATQVDDLLSEIRIRAVKD---ERVLVTTLTKRMAEDLTEYLHE-------- 469 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT----- 591 H LH D ER + + + G+ L+ ++ G+D+ V V + Sbjct 470 -HDVKVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEG 528 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 +++ + IGR R G AI + + + + + + E G Sbjct 529 FLRSERSLIQTIGRAAR-NLHGKAILYADSITKSMKKAMDETERRREKQQAYNEKMGIQP 587 Query 652 WYNEMQL--LSEIEEHLNCTISQVEPDIKV 679 + + + E+ + +V + + Sbjct 588 QALKRNIKDIMELGDITKSRKQKVSKTVPL 617 >sp|P32639|BRR2_YEAST Pre-mRNA-splicing helicase BRR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BRR2 PE=1 SV=2 Length=2163 Score = 71.3 bits (173), Expect = 3e-11, Method: Composition-based stats. Identities = 64/411 (16%), Positives = 144/411 (35%), Gaps = 56/411 (14%) Query 281 KFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAA-RDQLSVLENG 339 K +A K + + P + L +++F++ + ++ + G R Q+ + Sbjct 549 KLNLSAFKIVYIAPLKAL---VQEQVREFQRRLAFLGIKVAELTGDSRLSRKQI----DE 601 Query 340 VDIVVGTPGRLDDLVSTGKLNLS---QVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTS 396 ++V TP + D+ + NL+ VR L++DE LL + + + + Sbjct 602 TQVLVSTPEK-WDITTRNSNNLAIVELVRLLIIDEIH-LLHDDRGPVLESIVARTFWASK 659 Query 397 DGKR-LQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRL 455 G+ ++I SATL +++ + + P + S P++ + + Sbjct 660 YGQEYPRIIGLSATLPNYED---VGRFLRVPKEGLFYFDSSFRP------CPLSQQFCGI 710 Query 456 WERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKM-DQAIIFCR 514 ER ++ + + N + K ++K ++ I Sbjct 711 KERNSLKKLKAMNDACYEKVLESINEGNQIIVFVHSRKETSRTATWLKNKFAEENITHKL 770 Query 515 TKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL---HGDRKPHERKQNLERFKKGDVRFLIC 571 TK D + + + D + + H +R + + F G ++ L+C Sbjct 771 TKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHAGLTRSDRSLSEDLFADGLLQVLVC 830 Query 572 TDVAARGIDIHGVPYVIN----VTLPD------EKQNYVHRIGRVG--RAERMGLAISLV 619 T A G+++ +I + Q+ + +GR G R + G I + Sbjct 831 TATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIIIT 890 Query 620 ATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + + V + + E Q +S++ ++LN + Sbjct 891 DQSNVQYYLSVLNQQ-----------------LPIESQFVSKLVDNLNAEV 924 Score = 37.8 bits (86), Expect = 0.55, Method: Composition-based stats. Identities = 13/66 (20%), Positives = 27/66 (41%), Gaps = 1/66 (2%) Query 9 VMPEIAQAVEEMDWLLPTDIQAESIPLILGG-GDVLMAAETGSGKTGAFSIPVIQIVYET 67 + +A + IQ++ G ++L+ A TGSGKT + V++ + Sbjct 483 LPDWCQEAFPSSETTSLNPIQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTVLKALSHH 542 Query 68 LKDQQE 73 + + Sbjct 543 YNPKTK 548 >sp|A7HKC0|UVRB_FERNB UvrABC system protein B OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) OX=381764 GN=uvrB PE=3 SV=1 Length=661 Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 24/178 (13%), Positives = 60/178 (34%), Gaps = 15/178 (8%) Query 503 EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFK 562 + + ++A++ TK + L +Y ++ + LH + +R + L++ + Sbjct 439 KKRGEKALVTVLTKKTAEMLAEYLVEF---------NIRALYLHSELDAIKRVEVLKKLR 489 Query 563 KGDVRFLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAIS 617 G++ ++ ++ G+D+ V V + + + IGR R G I Sbjct 490 AGEIDVVVGVNLLREGLDLPEVSLVAILDADTEGFLRSETTLIQIIGRTAR-NENGKVIM 548 Query 618 LVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEP 675 + + + + E G L+ +I ++ Sbjct 549 YADRITPAMQRAIDETNRRRKIQMEYNEKHGIKPKTIIKPLMEDIFAPFRDKEEEMYK 606 >sp|Q8VHK9|DHX36_MOUSE ATP-dependent DNA/RNA helicase DHX36 OS=Mus musculus OX=10090 GN=Dhx36 PE=1 SV=2 Length=1001 Score = 70.9 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 64/337 (19%), Positives = 108/337 (32%), Gaps = 57/337 (17%) Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G R Q + I+ T G + + + LS V +VLDE + + Sbjct 284 GYQIRLQSRLPRKQGSILYCTTGIILQWLQSDS-RLSSVSHIVLDEIH---ERNLQSDV- 338 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFDVKK-LSEKIM-HFPTWVDLKGEDSVPDTVHH 443 + I + L+VI+ SATL++ + M H P + E + D + Sbjct 339 -LMTVIKDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 397 Query 444 VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIK- 502 + + K R K V+ ++ A E W IK L+ Y+ + Sbjct 398 IRYVPDQKEHRSQ---FKRGFMQGHVNRQEKEEKEAIYKERWPAYIKELRTRYSASTVDV 454 Query 503 -----------------------EHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQ 539 E + ++F + L + Q K + Sbjct 455 LQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQ---VMFKSDK 511 Query 540 FSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI--------NVT 591 F + LH + Q ++ G + +I T++A I I V YVI + Sbjct 512 FLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 571 Query 592 LPDEKQN----YV------HRIGRVGRAERMGLAISL 618 + +V R GR GR + G L Sbjct 572 TQNNISTMSAEWVSKANAKQRKGRAGRV-QPGHCYHL 607 >sp|P57844|UVRB_PASMU UvrABC system protein B OS=Pasteurella multocida (strain Pm70) OX=272843 GN=uvrB PE=3 SV=1 Length=678 Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 52/313 (17%), Positives = 109/313 (35%), Gaps = 45/313 (14%) Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L + + P + + E P T++ P + ++ + +R Sbjct 372 RLPSALDNRPLRFE-EFERLAPQTIYVSATPGPYELEKSGGEIIDQVVR----------P 420 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKE-HKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDK 535 G PE+ + I + A + + ++ ++ TK ++L Y + G Sbjct 421 TGLLDPEIEIRPVAIQVDDLLSEARQRADQNERVLVTTLTKKMAEDLTDYLDEHG----- 475 Query 536 KGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT---- 591 LH D ER + + + G+ L+ ++ G+DI V V + Sbjct 476 ----IRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKE 531 Query 592 -LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCT 650 +++ + IGR R G AI + +S K T + + Sbjct 532 GFLRSERSLIQTIGRAAR-NLKGKAILYAD--------RITNSMQKAITETNRRREK--Q 580 Query 651 IWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAP 710 + YNE + + + + LN + ++ DI ++ +K A Y ++ Sbjct 581 MKYNEARGI--VPQALNKKVGEL-LDIGQGANQKAKANRNAKKVAEPTALY-----VVPQ 632 Query 711 TVQELAALEKEAQ 723 T +E K+ + Sbjct 633 TAKEYQQQIKKLE 645 >sp|Q587J7|TDR12_HUMAN Putative ATP-dependent RNA helicase TDRD12 OS=Homo sapiens OX=9606 GN=TDRD12 PE=2 SV=2 Length=1177 Score = 70.9 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 53/321 (17%), Positives = 114/321 (36%), Gaps = 54/321 (17%) Query 285 NAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD-QLSVLENGVDIV 343 N P A+IV P + A+ + ++ + + L +L+ G+ + + + L G D++ Sbjct 490 NGPLAVIVCPGWKKAQFIFELLGEYS--MSSRPLHPVLLTIGLHKEEAKNTKLPRGCDVI 547 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 V TP L L++ L ++ L+LDE + L ++ + + + Sbjct 548 VTTPYSLLRLLACQSLLFLRLCHLILDEVEVLF-LEANEQMFAILD-------------- 592 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLW-ERLGKS 462 +F ++++ +S P + V V N + L E + Sbjct 593 --------------------NFKKNIEVEERESAPHQIVAVGVHWNKHIEHLIKEFMNDP 632 Query 463 HIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNL 522 +I + + E K A+ I + + +IF + + + + Sbjct 633 YIVITAMEEAALYGNVQQVVHLCLECEKTSSLLQALDFIPS-QAQKTLIFTCSVAETEIV 691 Query 523 EQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKK----GDVRFLICTDVAARG 578 + + C+ +H + + + LE++KK G L TD Sbjct 692 CK---------VVESSSIFCLKMHKEMIFNL-QNVLEQWKKKLSSGSQIILALTDDCVPL 741 Query 579 IDIHGVPYVINVTLPDEKQNY 599 + I VI+ + P + + Sbjct 742 LAITDATCVIHFSFPASPKVF 762 Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 11/62 (18%), Positives = 29/62 (47%), Gaps = 1/62 (2%) Query 3 AFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQ 62 + ++ +A++ + P+ ++ S P I G DV++ + S + +PV+ Sbjct 417 TIDSSPLSADLKKALQRNKFPGPSHTESYSWPPIARGCDVVVISHCES-NPLLYLLPVLT 475 Query 63 IV 64 ++ Sbjct 476 VL 477 >sp|Q87MX6|UVRB_VIBPA UvrABC system protein B OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=uvrB PE=3 SV=1 Length=676 Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 49/291 (17%), Positives = 99/291 (34%), Gaps = 35/291 (12%) Query 417 KLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTR 476 +L + + P + + E P T+ P N + ++ + D V Sbjct 368 RLPSALDNRPLKFE-EFESLAPQTIFVSATPGNYELEKSAGEIA------DQVVRPTGLL 420 Query 477 PGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKK 536 + + L E +RA KE ++ ++ TK ++L +Y + Sbjct 421 DPILEVRPVATQVDDLLSEIRIRAAKE---ERVLVTTLTKRMAEDLTEYLHE-------- 469 Query 537 GHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT----- 591 H LH D ER + + + G+ L+ ++ G+D+ V V + Sbjct 470 -HDVRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEG 528 Query 592 LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTI 651 +++ + IGR R G AI ++ S K T + + Sbjct 529 FLRSERSLIQTIGRAAR-NIEGKAILYAD--------NITKSMKKAMDETNRRREK-QQA 578 Query 652 WYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYK 702 + +M + + + I ++ DI + + K K A +Y+ Sbjct 579 YNEKMGITPQALKRNIKDIMEL-GDITKSKRQRNTKQVPLSKVAEPSQTYE 628 >sp|Q4UMJ0|MFD_RICFE Transcription-repair-coupling factor OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=mfd PE=3 SV=1 Length=1142 Score = 70.9 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 60/347 (17%), Positives = 113/347 (33%), Gaps = 72/347 (21%) Query 287 PKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENG-VDIVVG 345 P+ +V P+ L Q + + K + +I A+ S LE+G ++I++G Sbjct 631 PQVAVVVPTTILCSQHFSRFIERFKGFGLNIKQLSSVISAKEAKIIRSELESGKINIIIG 690 Query 346 TPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIV 405 T + ++ L++DE + G +F+ + + V+ Sbjct 691 T-----HSLLHKNTKFFNLKLLIIDE-EQHFGVGQKEFLKSLKS----------SSHVLA 734 Query 406 CSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIR 465 SAT +P T+ + + + L + +R Sbjct 735 MSAT--------------------------PIPRTLQMSMTGLKELSIIATPPLNRLEVR 768 Query 466 TDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQY 525 T + A E + + ++ D +++E+ Sbjct 769 TMVMPFDPVIIRDALLREHF-------------------RGGRSFYVVPRIKDIEDIEKQ 809 Query 526 FIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVP 585 Q K HG P + + + F G L+ T + GIDI Sbjct 810 LKQIVPELSYKIA-------HGKMTPSKIDEVMSEFYAGKFDILVSTTIIESGIDIAEAN 862 Query 586 -YVIN-VTLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV 630 VI+ + Q Y R GR+GR + G A VA+ K+ + + Sbjct 863 TMVIHKADMLGLSQLYQLR-GRIGRGKVRGYAYLTVASHKKMTSHSL 908 >sp|A2PYH4|HFM1_HUMAN Probable ATP-dependent DNA helicase HFM1 OS=Homo sapiens OX=9606 GN=HFM1 PE=1 SV=2 Length=1435 Score = 70.9 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 66/408 (16%), Positives = 135/408 (33%), Gaps = 49/408 (12%) Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 + P + L Q ++ K+ K+ L + G D + I++ TP + D Sbjct 336 MAPIKALCSQRFDDWKE--KF-GPIGLNCKELTGDTVMDDLFEI--QHAHIIMTTPEKWD 390 Query 352 DLVSTGKLN--LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL-------- 401 + + N + VR ++DE + + + + +++ V S + L Sbjct 391 SMTRKWRDNSLVQLVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIP 450 Query 402 -QVIVCSATLHS-FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERL 459 + + SAT+ + D+ + P E P + VV+ ++ + Sbjct 451 MRFVAVSATIPNAEDIAEWLSDG-ERPAVCLKMDESHRPVKLQKVVLGFPCSSN---QTE 506 Query 460 GKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDC 519 K + + A P + A + + A +K+ K F T Sbjct 507 FKFDLTLNYKIASVIQMYSDQKPTLVFCATRKGVQQAASVLVKDAK------FIMTVEQK 560 Query 520 DNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI 579 L++Y + + H + +RK F GD+ L T A G+ Sbjct 561 QRLQKYAYSVRDSKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGV 620 Query 580 DIHGVPYVINVTLPDEKQNY-------------VHRIGRVGR--AERMGLAISL--VATE 622 ++ VI +Y + IGR GR + A+ + ++T Sbjct 621 NLPAHLVVI-----KSTMHYAGGLFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTR 675 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTI 670 + + C + + L E I + + ++ E + T+ Sbjct 676 DKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITDVNIAVEWIRSTL 723 Score = 35.5 bits (80), Expect = 2.3, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (3%) Query 28 IQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 IQ+++ +L + ++ A TGSGKT F + + +++ E Sbjct 284 IQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLME 323 >sp|F4JFJ3|Y3206_ARATH ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02060 PE=2 SV=1 Length=823 Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 56/344 (16%), Positives = 111/344 (32%), Gaps = 83/344 (24%) Query 288 KALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLEN----GVDIV 343 +A+++ P+ LA+Q + I + ++ P ++ L+ ++ LE ++I+ Sbjct 321 QAMVLAPTIVLAKQHYDVISE--RFSLYPHIKVGLLSRFQTKAEKEEYLEMIKTGHLNII 378 Query 344 VGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV 403 VGT + ++ S + LV+DE Q + Q ++ S + V Sbjct 379 VGT-----HSLLGSRVVYSNLGLLVVDE-----EQRFG------VKQKEKIASFKTSVDV 422 Query 404 IVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 + SAT L+ + + + +P H + + L Sbjct 423 LTLSAT-PIPRTLYLALTGFRDASLISTPPPERIPIKTHLSSFRKEKVIEAIKNELD--- 478 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLE 523 + Q + + Sbjct 479 -----------------------------------------RGGQVFYVLPRIKGLEEVM 497 Query 524 QYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHG 583 + + HG + + ++ +ERF +G ++ LICT++ G+DI Sbjct 498 DFLEEAFP-------DIDIAMAHGKQYSKQLEETMERFAQGKIKILICTNIVESGLDIQN 550 Query 584 VPYVI-----NVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 +I L Q Y R GRVGRA++ A + Sbjct 551 ANTIIIQDVQQFGL---AQLYQLR-GRVGRADKEAHAYLFYPDK 590 >sp|Q1RI82|MFD_RICBR Transcription-repair-coupling factor OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=mfd PE=3 SV=1 Length=1120 Score = 70.9 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 68/423 (16%), Positives = 137/423 (32%), Gaps = 80/423 (19%) Query 214 LAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSG 273 + F++ + K A FP ++ N E+ + G + Sbjct 559 IEFDLEEYDKFCAKFPFTETEDQLNAINDIREDLSNGMLMDRLICGDVGFGKTEVAMR-- 616 Query 274 NAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARD-- 331 A + N+P+ +V P+ L Q + +F + + L + V++++ Sbjct 617 AAFMVAKSLNENSPQVAVVVPTTILCSQ---HFARFTERFKDSDLNIKQLSSVVSSKEAK 673 Query 332 -QLSVLENG-VDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHN 389 S LE+G ++I++GT + ++ L++DE + G +F+ + + Sbjct 674 IVRSELESGKINIIIGT-----HSLLHKVTKFCNLKLLIIDE-EQHFGVGQKEFLKSLKS 727 Query 390 QIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVN 449 V+ SAT +P T+ + + Sbjct 728 ----------STHVLAMSAT--------------------------PIPRTLQMSMTGLK 751 Query 450 PKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQA 509 + L + +RT + A E + + ++ Sbjct 752 ELSIIATPPLNRLEVRTSVMPFDPVIIRDALLHEHF-------------------RGGKS 792 Query 510 IIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFL 569 D +++E+ Q K HG P++ + + F G L Sbjct 793 FFVVPRINDIEDIEKQLKQIVPELSYKVA-------HGKMSPNKIDEIMSEFYAGKFDIL 845 Query 570 ICTDVAARGIDIHGVPYVINV--TLPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVW 627 I T + GIDI +I + Q Y R GR+GR + G A + + K+ Sbjct 846 ISTTIIESGIDIQDANTMIIHKADMLGLSQLYQLR-GRIGRGKMRGYAYLTLPSHKKMTP 904 Query 628 YHV 630 + + Sbjct 905 HSL 907 >sp|Q05B79|DHX36_BOVIN ATP-dependent DNA/RNA helicase DHX36 OS=Bos taurus OX=9913 GN=DHX36 PE=1 SV=1 Length=1010 Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 58/345 (17%), Positives = 109/345 (32%), Gaps = 51/345 (15%) Query 326 GVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFIN 385 G R Q + I+ T G + + + +LS V +VLDE + + Sbjct 293 GYQIRLQSRLPRKQGSILYCTTGIILQWLQSDP-HLSSVSHIVLDEIH---ERNLQSDV- 347 Query 386 RMHNQIPQVTSDGKRLQVIVCSATLHSFD--------------------VKKLSEKIMHF 425 + + + S L+V++ SATL++ V+ L E I+ Sbjct 348 -LMTVVKDLLSYRPDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEK 406 Query 426 PTWV--DLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPE 483 +V + V K ++ + ++ + + Sbjct 407 IRYVPEQKEHRSQFKKGFMQGHVNRQEKEEKEAIYKERWPGYLRELRQRYSASTVDVVEM 466 Query 484 MWSEAIKI-LKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSC 542 M E + + L + E + ++F + L + Q K +F Sbjct 467 MDDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQ---VMFKSDKFII 523 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI--------NVTLPD 594 + LH + Q +R G + +I T++A I I V YVI + + Sbjct 524 IPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQN 583 Query 595 EKQN----YV------HRIGRVGRAERMGLAISLVATEKEKVWYH 629 +V R GR GR + G L + + + Sbjct 584 NISTMSAEWVSKANAKQRKGRAGRV-QPGHCYHLYNSLRASLLDD 627 >sp|Q9HJX7|HELS_THEAC ATP-dependent DNA helicase Hel308 OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) OX=273075 GN=hel308 PE=3 SV=1 Length=674 Score = 70.5 bits (171), Expect = 3e-11, Method: Composition-based stats. Identities = 61/393 (16%), Positives = 128/393 (33%), Gaps = 58/393 (15%) Query 251 PKDGFVALSKAPDGYIVKSQHSGNAQVTQT---KFLPNAPKALIVEPSRELAEQTLNNIK 307 + + K + + +G + + + K++ + P R LA + + + Sbjct 27 QRMAIEQIRKGRNVVVSVPTAAGKTLIAYSAIYETFQRNLKSIYIVPLRSLAMEKFSELS 86 Query 308 QFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFL 367 + + L+ + IG D D V+ T + D L+ L+ V L Sbjct 87 RLRDL----GLKVKMSIGDY---DDSPDFIKRYDAVILTSEKADSLLHHDPYILNDVGLL 139 Query 368 VLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPT 427 VLDE + + + + + ++++ SAT+ + M + Sbjct 140 VLDEIHTIGDESRGPTLETVASI---ARYVNPDVRILALSATVSNA---------MELAS 187 Query 428 WVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSE 487 W+D + PV KT L+ D + E + Sbjct 188 WLD-------ASLIKSDFRPVPLKTGILY-----RDQLYLDGKRRSGVSINQIIRETVED 235 Query 488 AIKILKGEYAVRAIKEHKMDQAIIF---CRTKIDCDN--LEQYFIQQGGGPDKKGHQFSC 542 ++L + + ++ D A IF KI D + + + H Sbjct 236 NGQVLMFVSSRKKAEDTARDLAQIFGSDANIKISSDETNVYDDMLNEILPRGVAFH---- 291 Query 543 VCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD---EKQNY 599 H +R F+ ++ ++ T A G+++ VI + + +Y Sbjct 292 ---HAGLSNDQRAFIEREFRARRIKVIVATPTLAAGVNLPA-RLVIVRDITRWGSDGISY 347 Query 600 V------HRIGRVGRAE--RMGLAISLVATEKE 624 + IGR GR + G+ + V+++ Sbjct 348 LTNMEIKQMIGRAGRPGYDQYGIGLIYVSSQSS 380 >sp|Q9CZU3|MTREX_MOUSE Exosome RNA helicase MTR4 OS=Mus musculus OX=10090 GN=Mtrex PE=1 SV=1 Length=1040 Score = 70.5 bits (171), Expect = 4e-11, Method: Composition-based stats. Identities = 71/427 (17%), Positives = 129/427 (30%), Gaps = 82/427 (19%) Query 288 KALIVEPSRELAEQTLNNI-KQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGT 346 + + P + L+ Q + ++F+ L+ G V S L +I Sbjct 182 RVIFTSPIKALSNQKYREMYEEFQD--------VGLMTGDVTINPTASCLVMTTEI---- 229 Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 L ++ G + +V +++ DE + +P + + Sbjct 230 ---LRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPD------NVHYVFL 280 Query 407 SATLHSFDVKKLSEKIMH---FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSH 463 SAT+ + ++ +E I H P V P + H + P L Sbjct 281 SATIPNA--RQFAEWICHLHKQPCHVIYTDYRPTP--LQHYIFPAGGDGLHLVVDENGDF 336 Query 464 IRTDDVHAKDNTRPGANSPEMWSEAIK-----ILKGEYAVRAIKEHKMDQAIIFCRTKID 518 + A R + + + K V+ I E IIF +K D Sbjct 337 REDNFNTAMQVLRDAGDLAKGDQKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKD 396 Query 519 CDNLEQYFIQQGGGPDKKGHQFS----------------------CVCL--------HGD 548 C+ + D++ + L HG Sbjct 397 CEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGG 456 Query 549 RKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVIN-----VTLPD----EKQNY 599 P ++ F +G ++ L T+ A GI++ V+ D Y Sbjct 457 LLPILKETIEILFSEGLIKALFATETFAMGINMPA-RTVLFTNARKYDGKDFRWISSGEY 515 Query 600 VHRIGRVGRAER--MGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQ 657 + GR GR G+ I +V EK+ + KG + + + YN + Sbjct 516 IQMSGRAGRRGMDDRGIVILMV---DEKMSPTIGKQLLKGSADPL---NSAFHLTYNMVL 569 Query 658 LLSEIEE 664 L +EE Sbjct 570 NLLRVEE 576 >sp|Q5N3H1|UVRB_SYNP6 UvrABC system protein B OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=uvrB PE=3 SV=1 Length=666 Score = 70.2 bits (170), Expect = 4e-11, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 99/316 (31%), Gaps = 61/316 (19%) Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 L+ G+ + + K Q I SAT +++++ E+I+ Sbjct 359 LVDHGFRLPSAADNRPLKSEEFWEKVRQCIFVSATPGDWEIERSEEQIVEQVIR------ 412 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 P V V V P ++ + L + R Sbjct 413 ---PTGVVDPEVFVRPTEGQVDDLLAEIQQRVR--------------------------- 442 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + ++A+I TK ++L Y +G LH + ER Sbjct 443 ----------RQERALITTLTKRMAEDLTDYLSDRG---------VKVRYLHSEINSIER 483 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRA 609 + L+ + GD LI ++ G+D+ V V + +++ + IGR R Sbjct 484 IEILQDLRNGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRTERSLIQTIGRAARH 543 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT 669 G AI E + + + + + T + + I L + Sbjct 544 IN-GQAILYADRMTESMEKAISETERRRRIQLDYNQRHNITPQPIIKRSSNAILSFLEVS 602 Query 670 ISQVEPDIKVPVDEFD 685 + +++V V + D Sbjct 603 RRLNKQELEVAVSQAD 618 >sp|Q31QS4|UVRB_SYNE7 UvrABC system protein B OS=Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805) OX=1140 GN=uvrB PE=3 SV=1 Length=666 Score = 70.2 bits (170), Expect = 4e-11, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 99/316 (31%), Gaps = 61/316 (19%) Query 375 LLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGE 434 L+ G+ + + K Q I SAT +++++ E+I+ Sbjct 359 LVDHGFRLPSAADNRPLKSEEFWEKVRQCIFVSATPGDWEIERSEEQIVEQVIR------ 412 Query 435 DSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG 494 P V V V P ++ + L + R Sbjct 413 ---PTGVVDPEVFVRPTEGQVDDLLAEIQQRVR--------------------------- 442 Query 495 EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHER 554 + ++A+I TK ++L Y +G LH + ER Sbjct 443 ----------RQERALITTLTKRMAEDLTDYLSDRG---------VKVRYLHSEINSIER 483 Query 555 KQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRA 609 + L+ + GD LI ++ G+D+ V V + +++ + IGR R Sbjct 484 IEILQDLRNGDFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRTERSLIQTIGRAARH 543 Query 610 ERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCT 669 G AI E + + + + + T + + I L + Sbjct 544 IN-GQAILYADRMTESMEKAISETERRRRIQLDYNQRHNITPQPIIKRSSNAILSFLEVS 602 Query 670 ISQVEPDIKVPVDEFD 685 + +++V V + D Sbjct 603 RRLNKQELEVAVSQAD 618 >sp|Q5D892|MER3_ARATH DExH-box ATP-dependent RNA helicase DExH17 OS=Arabidopsis thaliana OX=3702 GN=MER3 PE=2 SV=1 Length=1133 Score = 70.5 bits (171), Expect = 4e-11, Method: Composition-based stats. Identities = 70/443 (16%), Positives = 153/443 (35%), Gaps = 64/443 (14%) Query 292 VEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLD 351 + PS+ L ++ + + ++ + L + G ++ DI++ TP + D Sbjct 87 ISPSKAL---VQEKLRDWNQKFNSWGISCLELTGDNETYSTKNI--QDADIILTTPEKFD 141 Query 352 DLVSTGKLN-----LSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRL----- 401 + + S + +++DE LL+ + + +++ ++S+ + Sbjct 142 AVSRYRVTSGGLGFFSDIALVLIDEVH-LLNDPRGAALEAIVSRLKILSSNHELRSSTLA 200 Query 402 --QVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVH-HVVVPVNPKTDRLWER 458 +++ SAT+ +++ L+E + + GE+ P + V K D L+E+ Sbjct 201 SVRLLAVSATIP--NIEDLAEWLKVPTAGIKRFGEEMRPVKLTTKVFGYAAAKNDFLFEK 258 Query 459 LGKSHI--RTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTK 516 +++I + ++ + EA + L F +++ Sbjct 259 RLQNYIYDILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAMTYGYSNP-------FIKSR 311 Query 517 IDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAA 576 + L + + +G +R F GD++ + T+ A Sbjct 312 EQLERLREASPMCSDKQMQSYILQGVGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLA 371 Query 577 RGIDIHGVPYVI-----------NVTLPDEKQNYVHRIGRVGR--AERMGLAISLVATEK 623 GI++ VI + + ++ + GR GR + G+ I + Sbjct 372 HGINLPAHTVVIKSTQHFNKEKGHY-MEYDRSTLLQMSGRAGRPPFDDTGMVIIM----T 426 Query 624 EKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVE-PDIKVPVD 682 + H+ + GC E QLL + EHL I Q+ DI ++ Sbjct 427 RRETVHLYENLLNGCEVV-------------ESQLLPCLIEHLTAEIVQLTISDITRAIE 473 Query 683 EFDGKVTYGQ--KRAAGGGSYKG 703 Y + K KG Sbjct 474 WMKCSYLYVRMKKNPENYAIKKG 496 Score = 37.4 bits (85), Expect = 0.58, Method: Composition-based stats. Identities = 20/84 (24%), Positives = 39/84 (46%), Gaps = 1/84 (1%) Query 29 QAESIPLILGGG-DVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASV 87 Q+E PL +++++A TGSGKT F + ++++ +++ + K +KT Sbjct 29 QSECFPLCFHSDINMIISAPTGSGKTVLFELCILRLFSKSISKEGSFLHAKGALKTVYIS 88 Query 88 LNKWQMNPYDRGSAFAIGSDGLCC 111 +K + R S G+ C Sbjct 89 PSKALVQEKLRDWNQKFNSWGISC 112 >sp|Q465R3|HELS_METBF ATP-dependent DNA helicase Hel308 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) OX=269797 GN=hel308 PE=3 SV=1 Length=729 Score = 70.2 bits (170), Expect = 4e-11, Method: Composition-based stats. Identities = 67/399 (17%), Positives = 131/399 (33%), Gaps = 39/399 (10%) Query 249 FPPKDGFV--ALSKAPDGYIVKSQHSGN---AQVTQTKFLPNAPKALIVEPSRELAEQTL 303 +PP+ V L + + SG A++ K + KAL + P R LA + Sbjct 25 YPPQAEAVEKGLLEGRNLLAAIPTASGKTLLAELAMLKSILAGGKALYIVPLRALASEKF 84 Query 304 NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQ 363 ++F + +R + G RD+ + DI+V T + D L+ + + + Sbjct 85 RRFREFSEL----GIRVGISTGDYDLRDEGLGVN---DIIVATSEKTDSLLRNETVWMQE 137 Query 364 VRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIM 423 + +V DE + S + ++ ++ Q++ SAT+ + D +L+ + Sbjct 138 ISVVVADEVHLIDSPDRGPTLEVTLAKLRKMNPS---CQILALSATVGNAD--ELA-VWL 191 Query 424 HFPTWVDLKGEDSVPDTVHH---VVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGAN 480 V + + V KT + ++ D + + Sbjct 192 EAELVVSEWRPTELLEGVFFNGTFYCKDREKTVEQSTKDEAVNLALDTLKKDGQCLVFES 251 Query 481 SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQF 540 S + K E + A I D + + + Sbjct 252 SRKNCMAFAKKAASTVKKTLSAEDRNALAGI-------ADEILENSETDTSTNLAVCIRS 304 Query 541 SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI-NVT-------- 591 H R+ + F+ G ++ + T A G+++ +I N Sbjct 305 GTAFHHAGLTTPLRELVEDGFRAGRIKLISSTPTLAAGLNLPARRVIIRNYRRYSSEDGM 364 Query 592 LPDEKQNYVHRIGRVG--RAERMGLAISLVATEKEKVWY 628 P Y GR G R + G A+ + + KE V+ Sbjct 365 QPIPVLEYKQMAGRAGRPRLDPYGEAVLVAKSYKEFVFL 403 Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats. Identities = 15/66 (23%), Positives = 29/66 (44%), Gaps = 1/66 (2%) Query 5 SEMGVMPEIAQAVEEMDWLLPTDIQAESIPL-ILGGGDVLMAAETGSGKTGAFSIPVIQI 63 + + E+ Q + QAE++ +L G ++L A T SGKT + +++ Sbjct 4 ESLDLPDEVKQFYLNSGIMELYPPQAEAVEKGLLEGRNLLAAIPTASGKTLLAELAMLKS 63 Query 64 VYETLK 69 + K Sbjct 64 ILAGGK 69 >sp|Q054D2|UVRB_LEPBL UvrABC system protein B OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) OX=355276 GN=uvrB PE=3 SV=1 Length=666 Score = 70.2 bits (170), Expect = 4e-11, Method: Composition-based stats. Identities = 58/346 (17%), Positives = 108/346 (31%), Gaps = 53/346 (15%) Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 P L D L L++DE+ + I M D R Q +V Sbjct 321 PACLIDYFQGEFL-------LIVDESHVTI-----PQIGGMF------AGDKARKQTLV- 361 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 L + ++F + E P T++ P + + ++ + + + T Sbjct 362 --DFGFRLPSALDNRPLNFEEF-----ETLTPKTLYVSATPADYEMEKSSKVVEQIIRPT 414 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + R N E I+ ++ +I TK ++L Y+ Sbjct 415 GLLDPIVEVRSTKNQIEDLLVEIRKRIDV----------GERILITTLTKKMSEDLTDYY 464 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G LH + + +R + +KG LI ++ G+DI V Sbjct 465 KEIG---------LQVAYLHSEVETLDRVAIIRDLRKGIYDVLIGINLLREGLDIPEVSL 515 Query 587 VINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV--CSSRGKGCY 639 V + ++ + +GR R G AI + + + R K Sbjct 516 VAILDADKEGFLRNYKSLIQTVGRAAR-NVNGTAILYADKITDSMAKAIDETKRRRKIQE 574 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + LK E+ + E EE + V D++ + Sbjct 575 DHNLKFGITPLTIRKEVNDIIEREEKKRTSEDLVLEDVEKKFNSKK 620 >sp|Q04QJ9|UVRB_LEPBJ UvrABC system protein B OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) OX=355277 GN=uvrB PE=3 SV=1 Length=666 Score = 70.2 bits (170), Expect = 4e-11, Method: Composition-based stats. Identities = 58/346 (17%), Positives = 108/346 (31%), Gaps = 53/346 (15%) Query 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVC 406 P L D L L++DE+ + I M D R Q +V Sbjct 321 PACLIDYFQGEFL-------LIVDESHVTI-----PQIGGMF------AGDKARKQTLV- 361 Query 407 SATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRT 466 L + ++F + E P T++ P + + ++ + + + T Sbjct 362 --DFGFRLPSALDNRPLNFEEF-----ETLTPKTLYVSATPADYEMEKSSKVVEQIIRPT 414 Query 467 DDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYF 526 + R N E I+ ++ +I TK ++L Y+ Sbjct 415 GLLDPIVEVRSTKNQIEDLLVEIRKRIDV----------GERILITTLTKKMSEDLTDYY 464 Query 527 IQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPY 586 + G LH + + +R + +KG LI ++ G+DI V Sbjct 465 KEIG---------LQVAYLHSEVETLDRVAIIRDLRKGIYDVLIGINLLREGLDIPEVSL 515 Query 587 VINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATEKEKVWYHV--CSSRGKGCY 639 V + ++ + +GR R G AI + + + R K Sbjct 516 VAILDADKEGFLRNYKSLIQTVGRAAR-NVNGTAILYADKITDSMAKAIDETKRRRKIQE 574 Query 640 NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFD 685 + LK E+ + E EE + V D++ + Sbjct 575 DHNLKFGITPLTIRKEVNDIIEREEKKRTSEDLVLEDVEKKFNSKK 620 >sp|P9WFC7|UVRB_MYCTU UvrABC system protein B OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=uvrB PE=1 SV=2 Length=719 Score = 70.2 bits (170), Expect = 4e-11, Method: Composition-based stats. Identities = 34/217 (16%), Positives = 70/217 (32%), Gaps = 25/217 (12%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 + ++ TK ++L Y ++ G LH + R + L + + GD Sbjct 470 RVLVTTLTKKMAEDLTDYLLEMG---------IRVRYLHSEVDTLRRVELLRQLRLGDYD 520 Query 568 FLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 L+ ++ G+D+ V V + ++ + IGR R G Sbjct 521 VLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIGRAAR-NVSGEVHMYADKI 579 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 + + + + + E G L +I + L+ + + V V Sbjct 580 TDSMREAIDETERRRAKQIAYNEANGIDPQP----LRKKIADILDQVYREADDTAVVEVG 635 Query 683 EFDGKVTYGQK------RAAGGGSYKGHVDILAPTVQ 713 + G++ RA G ++G P + Sbjct 636 GSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAE 672 >sp|P9WFC6|UVRB_MYCTO UvrABC system protein B OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=uvrB PE=3 SV=2 Length=719 Score = 70.2 bits (170), Expect = 4e-11, Method: Composition-based stats. Identities = 34/217 (16%), Positives = 70/217 (32%), Gaps = 25/217 (12%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 + ++ TK ++L Y ++ G LH + R + L + + GD Sbjct 470 RVLVTTLTKKMAEDLTDYLLEMG---------IRVRYLHSEVDTLRRVELLRQLRLGDYD 520 Query 568 FLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 L+ ++ G+D+ V V + ++ + IGR R G Sbjct 521 VLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIGRAAR-NVSGEVHMYADKI 579 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 + + + + + E G L +I + L+ + + V V Sbjct 580 TDSMREAIDETERRRAKQIAYNEANGIDPQP----LRKKIADILDQVYREADDTAVVEVG 635 Query 683 EFDGKVTYGQK------RAAGGGSYKGHVDILAPTVQ 713 + G++ RA G ++G P + Sbjct 636 GSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAE 672 >sp|P67423|UVRB_MYCBO UvrABC system protein B OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=uvrB PE=3 SV=2 Length=719 Score = 70.2 bits (170), Expect = 4e-11, Method: Composition-based stats. Identities = 34/217 (16%), Positives = 70/217 (32%), Gaps = 25/217 (12%) Query 508 QAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVR 567 + ++ TK ++L Y ++ G LH + R + L + + GD Sbjct 470 RVLVTTLTKKMAEDLTDYLLEMG---------IRVRYLHSEVDTLRRVELLRQLRLGDYD 520 Query 568 FLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVATE 622 L+ ++ G+D+ V V + ++ + IGR R G Sbjct 521 VLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTIGRAAR-NVSGEVHMYADKI 579 Query 623 KEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVD 682 + + + + + E G L +I + L+ + + V V Sbjct 580 TDSMREAIDETERRRAKQIAYNEANGIDPQP----LRKKIADILDQVYREADDTAVVEVG 635 Query 683 EFDGKVTYGQK------RAAGGGSYKGHVDILAPTVQ 713 + G++ RA G ++G P + Sbjct 636 GSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAE 672 >sp|Q8PJB1|UVRB_XANAC UvrABC system protein B OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=uvrB PE=3 SV=1 Length=673 Score = 69.8 bits (169), Expect = 5e-11, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 71/218 (33%), Gaps = 36/218 (17%) Query 507 DQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDV 566 D+ ++ TK +NL +Y + G LH D ER + + + G Sbjct 447 DRVLVTTLTKRMAENLTEYLGEHG---------IRVRYLHSDIDTVERVEIIRDLRLGKF 497 Query 567 RFLICTDVAARGIDIHGVPYVINVT-----LPDEKQNYVHRIGRVGRAERMGLAISLVAT 621 L+ ++ G+D+ V V + + + IGR R R G AI Sbjct 498 DVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIGRAARNLR-GKAI----- 551 Query 622 EKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPV 681 Y ++ I + + ++E +L I+ + + Sbjct 552 ----------------LYADKMTRSMQAAIDETDRRREKQVEYNLEHGITPKSVERPIAD 595 Query 682 DEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALE 719 + +K++ G S HV P + + E Sbjct 596 IMEGARDDAAEKKSGKGRSKSRHVAEETPDYRAMKPAE 633 >sp|A2RUV5|HFM1_XENTR Probable ATP-dependent DNA helicase HFM1 OS=Xenopus tropicalis OX=8364 GN=hfm1 PE=2 SV=1 Length=1336 Score = 70.2 bits (170), Expect = 5e-11, Method: Composition-based stats. Identities = 65/406 (16%), Positives = 134/406 (33%), Gaps = 47/406 (12%) Query 253 DGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKY 312 FV + G V + + + Q K + + P + L Q ++ K K+ Sbjct 166 RNFVLCAPTGSGKTVIFELAIIRLLMQVPMPWTNVKIVYMAPIKALCGQRYDDWK--AKF 223 Query 313 IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNL--SQVRFLVLD 370 L + G D + I++ TP + D + K N VR ++D Sbjct 224 -GPVGLNCKELTGDTEMDDLFEI--QHAHIIMTTPEKWDSMTRKWKDNTLVQLVRLFLID 280 Query 371 EADGLLSQGYSDFINRM---------HNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEK 421 E L + + + + + + ++ + SAT+ +V+ +++ Sbjct 281 EVHILKEENRGATLEVVVSRMKTIYSLSHLSEDRKAFIPMRFVAVSATIP--NVEDIADW 338 Query 422 IM--HFPTWVDLKGEDSVPDTVHHVVV--PVNPKTDRLWERLGKSHIRTDDVHAKDNTRP 477 + + P E S P + VV+ P + K L ++ + + + RP Sbjct 339 LSDENSPGVCMKMDESSRPVKLRKVVLGFPCSTKQSEFKFDLTLNYKIANIIQTYSDGRP 398 Query 478 GANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKG 537 ++ K ++ ++ F + L++ + Sbjct 399 TL----VFCSTRKGVQQAASILTKDAK-------FVMSIEHKQRLQKCANSIKDSKLRDV 447 Query 538 HQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVI-----NVTL 592 Q+ H +RK F GD+ L T A G+++ VI + + Sbjct 448 LQYGVGYHHAGVDISDRKVIENSFLIGDLPVLFTTSTLAMGVNLPAH-LVIVKSTMHY-V 505 Query 593 PDEKQNY-----VHRIGRVGR--AERMGLAISLVATEKEKVWYHVC 631 Q Y + IGR GR + A+ + ++ + H+ Sbjct 506 SGMFQEYSETDILQMIGRAGRPQFDSTATAVIMTRLSTKEKYVHML 551 Score = 40.1 bits (92), Expect = 0.096, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (3%) Query 28 IQAESIPLIL-GGGDVLMAAETGSGKTGAFSIPVIQIVYE 66 IQ++++ +L + ++ A TGSGKT F + +I+++ + Sbjct 153 IQSKALEHLLYSDRNFVLCAPTGSGKTVIFELAIIRLLMQ 192 Lambda K H a alpha 0.318 0.128 0.342 0.792 4.96 Gapped Lambda K H a alpha sigma 0.267 0.0393 0.140 1.90 42.6 43.6 Effective search space used: 82703874496 Database: uniprot_sprot.fasta Posted date: Apr 3, 2024 12:05 PM Number of letters in database: 206,678,396 Number of sequences in database: 571,282 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40