[pdbjlvh2]Protein Model on 1fuu_B_1_A

Protein Model on 1fuu_B_1_A_1 (TEMPLATE: 1fuu )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(DDX1_HUMAN)	B 1 (B)	polymer(polypeptide(L)) [380 aa]	YEAST INITIATION FACTOR 4A :IF4A_YEAST
2	b		A 1 (A)	polymer(polypeptide(L)) [215 aa]	YEAST INITIATION FACTOR 4A :IF4A_YEAST	296R 325G 326G 327V(T) 328A(S) (identity: 60.0 %/35.6 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:1fuu_B_1 identity=35.6%

queryA        25:PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRA: 124
                :*  **   *  *  * ***  *  * **** ***   *      *  *                                                    :
1fuu_B_1      44:PSAIQQRAIUPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQ----------------------------------------------------:  91
SecStr          :  TTHHHHHHHHHHT  EEE   SSHHHHHHHHHHHHHH  TT  S  ----------------------------------------------------:    
ExpBur          :beebbbbbbbbbbeeebbbbbbeeeeebbbbbbbbbbeebeeeeeebb----------------------------------------------------:    

queryA       125:TKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKN: 224
                :                                                                                                    :
1fuu_B_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       225:QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLII: 324
                :                                                             ** **   * **** *            *         *:
1fuu_B_1      89:-------------------------------------------------------------APQALULAPTRELALQIQKVVUALAFHUD---IKVHACI: 124
SecStr          :-------------------------------------------------------------S  EEEE SSHHHHHHHHHHHHHHTTTS ---  EEEE :    
ExpBur          :-------------------------------------------------------------ebbbbbbbbeeeebeebbebbeebbeeee---bebbbbb:    
Contact         :                                                                       b                            

queryA       325:GGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMH: 424
                :**         *     ********  *                *****  ** *    *       *  *      **   ***    **     *   :
1fuu_B_1     125:GGTSFVEDAEGLRDA-QIVVGTPGRVFDNIQRRRFRTDKIKUFILDEADEULSSGFKEQIYQIFTLLPPTT------QVVLLSATUPN-DVLEVTTKFUR: 216
SecStr          :SS  HHHHHHHHHH -SEEEE HHHHHHHHHTTSS  TT  EEEETTHHHHHHTT HHHHHHHHHTS TT ------EEEEE SS  H-HHHHHHHHH S:    
ExpBur          :eeeeeeebeebbeeb-bbbbbbbeebeebbeeebbebeebebbbbbbbbebbeeebeeebbebbeebeeeb------bbbbbbeeeee-ebeebbeebbe:    
Contact         :bbbb                                                                                                

queryA       425:FPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQ: 524
                : *     *             * *                                  *   *    *     *         ** *** *      *  :
1fuu_B_1     217:NPVRILVKKDELTLEGIKQFYVNVEEE-------------------------------EYKYECLTDLYDSISV--------TQAVIFCNTRRKVEELTT: 277
SecStr          :S EEEEE       SSSEEEEEEEESG-------------------------------GGHHHHHHHHTTSS S--------  EEEEESSHHHHHHHHH:    
ExpBur          :ebbebeeeeeeeebeebebbbeebeee-------------------------------eebbeebbebbeebee--------bebbbbbeeeebbeebbe:    

queryA       525:YFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVATE: 622
                :               *       *    **      *  *  * ** **  *****   *  ***  **  * ** ***** *     * **  *  *:
1fuu_B_1     278:KL---------RNDKFTVSAIYSDLPQQERDTIUKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGXXXXKGVAINFVTNE: 366
SecStr          :HH---------HTTT  EEEE TTS HHHHHHHHHHHTTSS  EEEEEGGGTTT    S SEEEESS  SSTTHHHHHS    ----  EEEEEEESS:    
ExpBur          :eb---------eeeeeebbbbbeebeeeeeeebeeebeeeebebbbbbbebbeebeebebbbbbbbbbbeeeeebbebbbeee----ebbbbbbbbee:

Protein Model on 1fuu_B_1_A_1 (TEMPLATE: 1fuu )

Input Residue Numbers for Focused Sites