Protein Model on 4tyw_A_1_E_1 (TEMPLATE: 4tyw )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(DDX1_HUMAN) A 1 (A) polymer(polypeptide(L)) [508 aa] ATP-dependent RNA helicase MSS116, mitochondrial :MS116_YEAST
2 b E 1 (A) non-polymer(BEF) BERYLLIUM TRIFLUORIDE ION 48T 49G 52K 371E 408A 578G 605R 608R (identity: 100.0 %/36.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4tyw_A_1 identity=36.0%
queryA         1:MAAFSEMGVM-PEIAQAVEEMDWLLPTDIQAESIPLILGGGD--VLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYD:  97
                :     * **   **  *   *     *  *   *  **   *  *   * ** *** ** **  *    *  * *                         :
4tyw_A_1      18:LDSLLEEGVLDKEIHKAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQ-------------------------:  92
SecStr          :HHHHHHHTSS HHHHHHHHTTT SS  HHHHHHHHHHHS SSEEEEEE  TTS HHHHHHHHHHHHHHTTTTSS -------------------------:    
ExpBur          :beebbeeebbeeebbebbeebeeeebeebbbbbbebbeeeeebbbbbbbbbbbebbbbbbbbbbbbbbebeeeee-------------------------:    
Contact         :                                                  bb  b                                             

queryA        98:RGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLD: 197
                :                                                                                                    :
4tyw_A_1      -1:----------------------------------------------------------------------------------------------------:  -1
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

queryA       198:IDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---KALIVEP: 294
                :                                                                                             ** ** *:
4tyw_A_1      93:------------------------------------------------------------------------------------------YMVKAVIVAP: 102
SecStr          :------------------------------------------------------------------------------------------SS  EEEE S:    
ExpBur          :------------------------------------------------------------------------------------------ebbbbbbbbb:    

queryA       295:SRELAEQTLNNIKQFKKYIDNPKLRE---LLIIGGV---AARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFL---VLDEADGLLSQGYSDFIN: 385
                : * ** *     *       *  *         **    **      *     **  ***** *     *      **    ****** **  *  *   :
4tyw_A_1     103:TRDLALQIEAEVKKIHDM--NYGLKKYACVSLVGGTDFRAAMNKMNKLRP--NIVIATPGRLIDVLE--KYSNKFFRFVDYKVLDEADRLLEIGFRDDLE: 196
SecStr          :SHHHHHHHHHHHHHHHHH-- GGGGGS EEEE TTS HHHHHHHHHHH  --SEEEE HHHHHHHHH--HHHHHH TT  EEEEETHHHHTSTTTHHHHH:    
ExpBur          :bebbbbbbbebbeebbee--beebeebbbbbbbbeeeeeebbeebeeeeb--bbbbbbbebbbebbe--eebeebbebbbbbbbbbbbebbeeebeeebe:    
Contact         :                                                                                     b              

queryA       386:RMHNQIPQVTS-DGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEM: 484
                :          *           ****    * **   **       *   *      *              **   *                ***   :
4tyw_A_1     197:TISGILNEKNSKSADNIKTLLFSATLDD-KVQKLANNIMNKKECLFLDTVDKNEPEAH--------------ERIDQSVVISEKF---------ANSIFA: 272
SecStr          :HHHHHHHHH SS TT  EEEEEESS  S-HHHHHTTTT  SSEEEEEESS SSS SS --------------TTEEEEEEEESSS---------TTHHHH:    
ExpBur          :ebbebbbebbeeeeeebbbbbbbbbbee-ebbebbeebbbbebbebbbbbeeeeebbb--------------eebebbbbbbeeb---------bbbbbb:    
Contact         :                       b                                                                            

queryA       485:WSEAIKILKGEYAVRAIKEHKMD-QAIIFCRT----KIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGI: 579
                :  * **          ***      ****  *       *  *   *                   **      *     ****     * **** *** :
4tyw_A_1     273:AVEHIK--------KQIKERDSNYKAIIFAPTVKFTSFLCSILKNEF----------KKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGM: 354
SecStr          :HHHHHH--------HHHHHHTT  EEEEE S HHHHHHHHHHHHHHH----------TTTS EEEESTTS HHHHHHHHHHHHH SSEEEEE GGGTSS :    
ExpBur          :bbebbb--------ebbeeeeeebbbbbbbbbeebbebbbbbbeebb----------eeebebbbbbeeeebeebeebbeebeeeebbbbbbbbbbbbbb:    
Contact         :                                                                                                  b 

queryA       580:DIHGVPYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLV: 619
                :*   *  *     * *  ** *****  *    *      :
4tyw_A_1     355:DFPNVHEVLQIGVPSELANYIHRIGRTARSGKEGSSVLFI: 394
SecStr          :  TT  EEEEES  SSTTHHHHHHTTSS TT  EEEEEEE:    
ExpBur          :ebeebebbbbbbbbebebbbbbbbbbbbbeeeebbbbbbb:    
Contact         :                         b  b                                                                       


Input Residue Numbers for Focused Sites

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