Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
5303 | 932 | 66 | YP_009725307.1() | |
QUERYSEQ |
SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYN CCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAI SDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLR KHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML DMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ |
932 |
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region | name | description |
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1-932 | DISORDER | predicted by DISOPRED |
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932 | |||||||
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pdb_id | a1 | identity[%]2 | description | |||
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A | 100.0 | R1AB_SARS2 RNA-directed RNA polymerase | |||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
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932 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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B | R1AB_SARS2 Non-structural protein 7[70 aa] | A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase |
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C | R1AB_SARS2 Non-structural protein 7[65 aa] | A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 RNA-directed RNA polymerase |
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C | R1AB_SARS2 Non-structural protein 7[72 aa] | A | 100.0 /100.0 |
18 /18 |
R1AB_SARS2 RNA-directed RNA polymerase |
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C | R1AB_SARS2 Non-structural protein 8[43 aa] | A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | R1AB_SARS2 Non-structural protein 8[113 aa] | A | 100.0 /100.0 |
46 /46 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | R1A_CVHSA NSP8[109 aa] | A | 100.0 /97.0 |
2 /2 |
R1AB_CVHSA NSP12 |
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D | R1AB_SARS2 Non-structural protein 8[186 aa] | A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | R1AB_SARS2 Non-structural protein 8[104 aa] | A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 RNA-directed RNA polymerase |
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B | R1AB_SARS2 Non-structural protein 8[115 aa] | A | 100.0 /100.0 |
42 /42 |
R1AB_SARS2 RNA-directed RNA polymerase |
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B | R1AB_SARS2 Non-structural protein 8[150 aa] | A | 100.0 /100.0 |
52 /52 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | R1AB_SARS2 Non-structural protein 8[154 aa] | A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 RNA-directed RNA polymerase |
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B | R1AB_SARS2 Non-structural protein 8[114 aa] | A | 100.0 /100.0 |
40 /40 |
R1AB_SARS2 RNA-directed RNA polymerase |
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G | R1AB_SARS2 Non-structural protein 8[186 aa] | A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | R1AB_SARS2 Helicase[596 aa] | A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H | R1AB_SARS2 Helicase[596 aa] | A | 100.0 /99.9 |
1 /1 |
R1AB_SARS2 RNA-directed RNA polymerase |
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N | R1AB_SARS2 Helicase[590 aa] | A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | R1AB_SARS2 Non-structural protein 8[31 aa] | A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | R1AB_SARS2 Non-structural protein 8[28 aa] | A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Non-structural protein 12 |
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D | R1AB_SARS2 Non-structural protein 8[99 aa] | A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 RNA-directed RNA polymerase |
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I | R1AB_SARS2 Non-structural protein 9[113 aa] | A | 100.0 /100.0 |
19 /19 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H | R1AB_SARS2 Proofreading exoribonuclease[523 aa] | A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 RNA-directed RNA polymerase |
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P | R1AB_SARS2 Proofreading exoribonuclease[524 aa] | A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase |
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B | R1AB_SARS2 SARS-CoV-2 nsp8[81 aa] | A | 100.0 /100.0 |
28 /28 |
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase (nsp12) |
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C | R1AB_SARS2 Non-structural protein 7[37 aa] | A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | R1AB_SARS2 Non-structural protein 9[74 aa] | A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | R1AB_SARS2 Non-structural protein 9[98 aa] | A | 100.0 /100.0 |
20 /20 |
R1AB_SARS2 RNA-directed RNA polymerase |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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932 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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G | Product RNA | A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H | Template RNA | A | 100.0 /100.0 |
21 /21 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | RNA (5'-R(*GP*UP*GP*GP*GP*CP*CP*CP*A)-3') | A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | RNA (5'-R(*GP*UP*GP*GP*GP*CP*CP*CP*A)-3') | A | 100.0 /100.0 |
19 /19 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | RNA product | A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 nsp12 |
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G | RNA product | A | 100.0 /100.0 |
26 /26 |
R1AB_SARS2 nsp12 |
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E | RNA (5'-R(P*UP*UP*AP*AP*GP*UP*UP*AP*U)-3') | A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Non-structural protein 12 |
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F | RNA (5'-R(P*UP*UP*CP*AP*UP*AP*AP*CP*UP*UP*AP*A)-3'.. | A | 100.0 /100.0 |
23 /23 |
R1AB_SARS2 Non-structural protein 12 |
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D | DNA/RNA (5'-R(P*CP*UP*AP*CP*GP*CP*G)-D(P*(RMP))-R(.. | A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 RNA-directed RNA polymerase nsp12 |
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E | RNA (5'-R(P*UP*GP*CP*AP*UP*CP*GP*CP*GP*UP*AP*G)-3'.. | A | 100.0 /100.0 |
28 /28 |
R1AB_SARS2 RNA-directed RNA polymerase nsp12 |
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D | DNA/RNA (5'-R(P*CP*UP*AP*CP*GP*CP*A)-D(P*(RMP))-R(.. | A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 RNA-directed RNA polymerase nsp12 |
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E | RNA (5'-R(P*UP*CP*AP*CP*UP*UP*GP*CP*GP*UP*AP*G)-3'.. | A | 100.0 /100.0 |
26 /26 |
R1AB_SARS2 RNA-directed RNA polymerase nsp12 |
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D | RNA (5'-R(P*CP*UP*AP*CP*GP*CP*AP*GP*UP*G)-3') | A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase nsp12 |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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E | RNA (5'-R(P*UP*GP*CP*AP*CP*UP*GP*CP*GP*UP*AP*G)-3'.. | A | 100.0 /100.0 |
29 /29 |
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase nsp12 |
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D | Primer | A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | Templete | A | 100.0 /100.0 |
26 /26 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | RNA (31-MER) | A | 100.0 /100.0 |
25 /25 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*CP*AP*CP*.. | A | 100.0 /100.0 |
13 /13 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | RNA (29-MER) | A | 100.0 /100.0 |
24 /24 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*CP*AP*CP*.. | A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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E | Primer-RNA (5'-R(P*UP*UP*CP*UP*CP*CP*UP*AP*AP*GP*A.. | A | 100.0 /100.0 |
18 /18 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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F | Template-RNA (5'-R(P*AP*CP*UP*AP*GP*CP*UP*UP*CP*UP.. | A | 100.0 /100.0 |
25 /25 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | RNA (25-MER) | A | 100.0 /99.9 |
10 /10 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | Primer | A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | Template | A | 100.0 /100.0 |
30 /30 |
R1AB_SARS2 RNA-directed RNA polymerase |
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A | RNA (5'-R(P*AP*GP*AP*UP*UP*AP*AP*GP*UP*UP*AP*U)-3'.. | C | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 RNA-directed RNA polymerase |
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B | RNA (5'-R(P*CP*CP*CP*UP*AP*UP*AP*AP*CP*UP*UP*AP*AP.. | C | 100.0 /100.0 |
30 /30 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | RNA (5'-R(P*GP*CP*UP*AP*UP*GP*UP*G*(LIG))-3') | A | 100.0 /100.0 |
13 /13 |
R1AB_SARS2 RNA-directed RNA polymeras |
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F | RNA (5'-R(P*CP*CP*CP*CP*CP*AP*CP*AP*UP*AP*GP*C)-3'.. | A | 100.0 /100.0 |
24 /24 |
R1AB_SARS2 RNA-directed RNA polymeras |
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E | RNA (5'-R(P*CP*CP*UP*AP*UP*AP*AP*CP*UP*UP*AP*AP*UP.. | A | 100.0 /100.0 |
28 /28 |
R1AB_SARS2 RNA-directed RNA polymerase |
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A | RNA (5'-R(P*GP*CP*UP*AP*UP*GP*UP*GP*AP*GP*AP*UP*UP.. | C | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | RNA (5'-R(P*GP*CP*UP*AP*UP*GP*UP*GP*AP*GP*AP*UP*UP.. | A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase |
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B | RNA (5'-R(P*CP*CP*CP*UP*AP*UP*AP*AP*CP*UP*UP*AP*AP.. | C | 100.0 /100.0 |
26 /26 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | RNA (57-MER) | A | 100.0 /100.0 |
27 /27 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | RNA (33-MER) | A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | RNA (5'-R(P*CP*CP*CP*CP*AP*UP*AP*AP*CP*UP*UP*AP*AP.. | A | 100.0 /100.0 |
28 /28 |
R1AB_SARS2 RNA-directed RNA polymerase |
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T | Template RNA | A | 100.0 /100.0 |
27 /27 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H | template | A | 100.0 /100.0 |
21 /21 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | RNA (37-MER) | A | 100.0 /100.0 |
20 /20 |
R1AB_SARS2 RNA-directed RNA polymerase |
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G | RNA (43-MER) | A | 100.0 /100.0 |
27 /27 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | RNA (36-MER) | A | 100.0 /100.0 |
28 /28 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | RNA (5'-R(P*CP*UP*AP*AP*GP*AP*AP*GP*CP*UP*AP*UP*U*.. | A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | RNA (5'-R(P*AP*UP*UP*UP*UP*AP*AP*UP*AP*GP*CP*UP*UP.. | A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | Product RNA | A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 Replicase polyprotein 1ab |
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E | Template RNA | A | 100.0 /100.0 |
30 /30 |
R1AB_SARS2 Replicase polyprotein 1ab |
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D | Product RNA | A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 Replicase polyprotein 1ab |
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H | Template RNA | A | 100.0 /100.0 |
34 /34 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H | Template RNA | A | 100.0 /100.0 |
32 /32 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H | Template RNA | A | 100.0 /100.0 |
31 /31 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | Product RNA (35-MER) | A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | Template RNA (55-MER) | A | 100.0 /100.0 |
28 /28 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | Product RNA (35-MER) | A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | Template RNA (55-MER) | A | 100.0 /100.0 |
27 /27 |
R1AB_SARS2 RNA-directed RNA polymerase |
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D | Product RNA (35-MER) | A | 100.0 /100.0 |
13 /13 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | Template RNA (55-MER) | A | 100.0 /100.0 |
34 /34 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E | Product RNA (35-MER) | A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | Template RNA (55-MER) | A | 100.0 /100.0 |
24 /24 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | Template RNA (55-MER) | A | 100.0 /100.0 |
30 /30 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | Template | A | 100.0 /99.9 |
23 /23 |
R1AB_SARS2 Replicase polyprotein 1ab |
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H | RNA (5'-R(P*AP*U)-3') | A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 RNA-directed RNA polymerase |
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J | template | A | 100.0 /100.0 |
27 /27 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H | RNA (5'-R(P*AP*UP*UP*A)-3') | A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | Primer RNA | A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | Primer RNA | A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase |
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G | Template RNA | A | 100.0 /100.0 |
23 /23 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H | SARS-CoV-2 5' UTR | A | 100.0 /100.0 |
18 /18 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F | Primer RNA | A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase nsp12 |
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G | Template RNA | A | 100.0 /100.0 |
23 /23 |
R1AB_SARS2 RNA-directed RNA polymerase nsp12 |
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H | SARS-CoV-2 5' UTR | A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 RNA-directed RNA polymerase nsp12 |
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F | RNA (26-MER) | A | 100.0 /99.9 |
23 /23 |
R1AB_SARS2 RNA-directed RNA polymerase |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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|||||||
932 | pdb_id | contact mol | homologue | ||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
a3 | description | a4 | identity[%]5 | Ncon6 | description | |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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L |
ADP
|
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 RNA-directed RNA polymerase |
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M |
1N7
|
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 RNA-directed RNA polymerase |
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N |
1N7
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 RNA-directed RNA polymerase |
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U |
1N7
|
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 RNA-directed RNA polymerase |
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M |
GE6
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Non-structural protein 12 |
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K |
F86
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 RNA-directed RNA polymerase |
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T |
F86
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 RNA-directed RNA polymerase |
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L |
GDP
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 RNA-directed RNA polymerase |
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G |
H3U
|
D | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H |
H3U
|
D | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase |
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G |
1RP
|
C | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 RNA-directed RNA polymerase |
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N |
RVP
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 RNA-directed RNA polymeras |
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O |
HCU
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 RNA-directed RNA polymerase |
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J |
AT9
|
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 RNA-directed RNA polymerase |
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K |
AT9
|
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 RNA-directed RNA polymerase |
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N |
AT9
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 RNA-directed RNA polymerase |
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G |
NWX
|
A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 RNA-directed RNA polymerase |
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G |
ATP
|
A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 RNA-directed RNA polymerase |
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J |
UTP
|
A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase |
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L |
GTP
|
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 RNA-directed RNA polymerase |
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M |
GTP
|
A | 100.0 /100.0 |
19 /19 |
R1AB_SARS2 RNA-directed RNA polymerase |
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N |
L2B
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 RNA-directed RNA polymerase |
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K |
CTP
|
A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 RNA-directed RNA polymerase |
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T |
U5P
|
A | 100.0 /99.9 |
8 /8 |
R1AB_SARS2 Replicase polyprotein 1ab |
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M |
GNP
|
A | 100.0 /100.0 |
13 /13 |
R1AB_SARS2 RNA-directed RNA polymerase |
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S |
6GS
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 RNA-directed RNA polymerase |
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E |
GO3
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F |
GO3
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 RNA-directed RNA polymerase |
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L |
WSB
|
A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 RNA-directed RNA polymerase |
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O |
WSB
|
A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 RNA-directed RNA polymerase |
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I |
VSN
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 RNA-directed RNA polymerase |
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J |
VSN
|
A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 RNA-directed RNA polymerase nsp12 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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|||||||
932 | pdb_id | contact mol | homologue | ||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
a3 | description | a4 | identity[%]5 | Ncon6 | description | |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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E |
ZN
|
A | 100.0 /97.0 |
4 /4 |
R1AB_CVHSA NSP12 |
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F |
ZN
|
A | 100.0 /97.0 |
4 /4 |
R1AB_CVHSA NSP12 |
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I |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 RNA-directed RNA polymerase |
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J |
ZN
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 RNA-directed RNA polymerase |
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G |
ZN
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 RNA-directed RNA polymerase |
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H |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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I |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 nsp12 |
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J |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 nsp12 |
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E |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 RNA-directed RNA polymerase |
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F |
ZN
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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G |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H |
ZN
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K |
MG
|
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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I |
MG
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I |
MG
|
A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
L |
MG
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() |
![]() |
N |
MG
|
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() |
![]() |
M |
MG
|
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
H |
MN
|
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 RNA-directed RNA polymerase |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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|||||||
932 | pdb_id | contact mol | homologue | ||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
a3 | description | a4 | identity[%]5 | Ncon6 | description | |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I | R1AB_SARS2 RNA-directed RNA polymerase[926 aa] | A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 RNA-directed RNA polymerase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | R1AB_SARS2 RNA-directed RNA polymerase[927 aa] | A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 RNA-directed RNA polymerase |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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932 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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K |
POP
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Non-structural protein 12 |
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H |
POP
|
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 RNA-directed RNA polymerase |
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M |
POP
|
C | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 RNA-directed RNA polymerase |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |