[pdbjlvh2]Protein Model on 7l1f_A_1_E

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7l1f_A_1_E_1

Protein Model on 7l1f_A_1_E_1 (TEMPLATE: 7l1f )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [832 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		E 1 (T)	polymer(polyribonucleotide)	RNA (5'-R(PAPUPUPUPUPAPAPUPAPGPCPUPUPCPUPUPAPG)-3')	496N 500K 501S 543N 558A 590G 592S 595Y 682S 683G 684D 685A 689Y 924M (identity: 100.0 %/92.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7l1f_A_1 identity=92.7%

queryA        32:YRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYAL: 131
                :*******************                                 *****************                  *************:
7l1f_A_1       1:YRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIYNLLKDCPAVAKHDXXXXXXXXXXXXXXXXXXLTKYTMADLVYAL: 100
SecStr          :  EEEEE SS EEEEE   --------------------------------- TTTTTSTTSTTB    ------------------  SS HHHHHHTT:    
ExpBur          :eebbbbeeeebbbbbeeee---------------------------------eebeeebeeeebbeeee------------------eeebbbbbbbbbb:    

queryA       132:RHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGV: 231
                :****************************************************************************************************:
7l1f_A_1     101:RHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGV: 200
SecStr          :TS  TTS HHHHHHHHHTTS  SSSSSSSS S TTT TTHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTEEEE  GGGB SSS B    S EE  TT   :    
ExpBur          :bebeeeebeebeebbeeeebbeeebbeeeebbbbeebeebeebbeebbeebbebbeebbebbeebeeebbebebebbbbbbebebeeeeebeeeeeeebe:    

queryA       232:PVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVR: 331
                :****************************************************************************************************:
7l1f_A_1     201:PVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVR: 300
SecStr          :EE HHHHHHHHHHHHHHTTTSSSSBSSS SSS B    TT     HHHHHHHHHHSTT SS   SSSSS  SSSHHHHHHHHHHHHTTTS TTS EE   :    
ExpBur          :bebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebeebbeebbeebbeebeeebebebeebeebebbbbbbbbbbbbbebbeeebbeebee:    

queryA       332:KIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKE: 431
                :****************************************************************************************************:
7l1f_A_1     301:KIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKE: 400
SecStr          :EEEETTEEEE   EEE SSS EEE S   SB SS  HHHHHHHHH THHHHTTSEE    SSS  EEEESSS          EE HHHHHHHTTTT   S:    
ExpBur          :ebebeeeeeebbbbbbbebbbbbebeeeeeeeeeeeebeebbeebbbeebeeeeeeeebeebebebebbeeeeeeeeebeeeeebeebeebbeeeeeeee:    

queryA       432:GSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYT: 531
                :****************************************************************************************************:
7l1f_A_1     401:GSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYT: 500
SecStr          :SSS S   B     TTHHHHHHGGGGG       SHHHHHHHHHGGGGS S       GGG     S S   BTGGGT  TTHHHHSS HHHHHHHHHHT:    
ExpBur          :eeeeebeeeeeeeeeebebebbeebeebeebbbbbbbbebbbbbbeebbeebebbbbebeeeeeeeeeeebbbbbeeebebeebeeebeeeebeebbeeb:    
Contact         :                                                                b   bb                              

queryA       532:KRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR: 631
                :****************************************************************************************************:
7l1f_A_1     501:KRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLR: 600
SecStr          :TT     BBB       BSSS      B  HHHHHHHHHHHHHHHHHHTT SSSSB  S  STTTHHHHHHHHHTSS SSEEE     TTSTT   HHHH:    
ExpBur          :bebbbbbbbebeeeeeeeeeeebebebebbbbbbbbbebbbbebeeebeeeeeebbbeeeeeeebbbeebbeebbeeeeebebbbbebbebebbbbbbbb:    
Contact         :           b              b                               b b  b                                    

queryA       632:IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECL: 731
                :****************************************************************************************************:
7l1f_A_1     601:IMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECL: 700
SecStr          :HHHHHHTT   TTT  HHHHHHHHHHHHHHHTS  BBSSSSEE   SS  SS TTHHHHHHHHHHHHHHHHHHHHHHTS TTT   HHHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbeebeeebeeeeebbbbbbbbbbbbebebbbeebbbebebbbbeebebbeebbbbbbbbbbbbbbbbbbbebbbeebeeeebeebbeebbebb:    
Contact         :                                                  bbbb   b                                          

queryA       732:YRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPY: 831
                :****************************************************************************************************:
7l1f_A_1     701:YRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPY: 800
SecStr          :HT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEETTTTTTTSS  HHHHHHHHHHTS     TTT   B  SSS  S SSS EE  EEETTEEE  EE:    
ExpBur          :beeeeeeeebbeebeebbeeebbbbbeeebbbbbbbeeeeeeebbbeeebbbbbbbbbbbbbbeeeebbebeeeeebbeebeebbbbebeeeeeebbbbb:    

queryA       832:PDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :****************************************************************               *******************:
7l1f_A_1     801:PDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXXXXXXNTSRYWEPEFYEAMYTPHT: 898
SecStr          :  HHHHHHHHHEES SGGGSHHHHHHHHHHHHHHT TTTT SSHHHHHHHHHHHHHHHHHHHH ---------------  S TTSHHHHHHHT S  :    
ExpBur          :beebebbbbbbbbeeeeeeebeebeeebeebbbebbbbeeeeeeeeeebbebbbebbeebeeee---------------eeeeeeeeeebeebbeeee:    
Contact         :                                                                                            b

Protein Model on 7l1f_A_1_E_1 (TEMPLATE: 7l1f )

Input Residue Numbers for Focused Sites