#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [811 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [115 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 272K 273Y 323P 324T 325S 326F 328P 329L 330V 331R 332K 339P 340F 344T 368F 371L 372L 375A 378P 379A 380M 381H 382A 383A 384S 385G 386N 387L 388L 389L 391K 402T 403N 404N 405V 407F 509W 514L 518S 666M (identity: 100.0 %/97.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7bw4_A_1 identity=97.7% |
queryA 31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQR------------: 118 :******************** : 7bw4_A_1 22:VYRAFDIYNDKVAGFAKFLK--------------------------------------------------------------------XXXXXXXXXXXX: 53 SecStr : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------: ExpBur :eebbebeeeeebbbbbeeee--------------------------------------------------------------------------------: queryA 119:--------------------------------------------------------LTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDW: 162 : ********************************************: 7bw4_A_1 54:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDW: 153 SecStr :-------------------------------------------------------- SSBHHHHHHHHHS TTS HHHHHHHHHTTSS HHHHHSTTS: ExpBur :--------------------------------------------------------ebebbbbbbbbbbbebeeeebebbeebbeeeebeeeebbeeeeb: queryA 163:YDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLT: 262 :****************************************************************************************************: 7bw4_A_1 154:YDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLT: 253 SecStr :S SSSS SHHHHHHHHHHHHHHHTSSHHHHHHHTTTTEEEE GGGBBSSS B S EE TT EEE HHHHHHHGGGGTSS SHHHH STTS TT: ExpBur :bbbbeeeebeebbbebbeebbebbeebeebbeeeeeebeebebbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeee: queryA 263:KPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLH: 362 :****************************************************************************************************: 7bw4_A_1 254:KPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLH: 353 SecStr :S SS HHHHHHHHHHHSTT SS SSGGG SSHHHHHHHHHHHHHHHTTS TTSSEEEEEEEEETTEEEEEEEEEE SSS EEE S TT: ExpBur :eeeeeeeeeeeebbeebeebbeebbebbeeebbbebeebeebbbbbbbbbbbbbbbebbbeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeee: Contact : bbbb bbbb bbbbb bb b queryA 363:SSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPT: 462 :****************************************************************************************************: 7bw4_A_1 354:SSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPT: 453 SecStr :B HHHHHHHHH SHHHHHSS SS SS B SSSS B EE HHHHHHHHHTT S SS S B B SHHHHHHHHHHHS : ExpBur :eeeeeeeeebbbebbbbebeeeeeeeebeebebebebbeeeeeeeeebeeeeebeebeeebeeeebeeeeeebeeebebeebebebebebbeebeebbeb: Contact : b bb b bbbbbbbbbbbb b bbbb b queryA 463:MCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSI: 562 :****************************************************************************************************: 7bw4_A_1 454:MCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSI: 553 SecStr : SHHHHHHHHHHHHHTTT TTS TTS TTTTTS HHHHHHHS HHHHHHHHHHHTT EEEEEE S BSSS EEEE H: ExpBur :bbbbbbbbbbbbbbbebbeebeebebebeeeeeeeeeeebbbbbeeeeebeebbeebeeeebeebbebbeebbbbbbbbbebeeeeeeeeebebebbbbb: Contact : b b b queryA 563:CSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQV: 662 :****************************************************************************************************: 7bw4_A_1 554:CSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQV: 653 SecStr :HHHHHHHHHHHHHHHHHHT SSSSB S STTTHHHHHHHHHHTT SSEEEE TTHHHH HHHHHHHHHHHHHT SSS HHHHHHHHHHHHHHH: ExpBur :bbbbbbbbbbbebbeebbeeeeebbbbeeeebebbbeebbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbb: queryA 663:LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDA: 762 :****************************************************************************************************: 7bw4_A_1 654:LSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDA: 753 SecStr :TS EEE SS EEE S SSSHHHHHHHHHHHHHHHHHHHHHHHHSS TTS SHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHEEEEEETTEE: ExpBur :bbbbbbbebbbbebebbbbeeeebbebbbbbbbbbbbbbbbbbbbbeebbeebeeeebbebbbebbeebbeeeeeeeebbeebbebbeebbbbbbeebeb: Contact : b queryA 763:VVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSL: 862 :****************************************************************************************************: 7bw4_A_1 754:VVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSL: 853 SecStr :EEEEEHHHHHHTSS HHHHHHHHHHHHS GGG EES SSS S BTTBEEEEEE SS EEEEEE HHHHHHHHHEE SSSSS HHHHHHHHHHH: ExpBur :bbbbbbebbeeebbbebebbbbbbbbbbbbbbeeeebbebeebeebbeebeebebbebeeeeeebbbbbbebbebbbbbbbbeeebeeeeeebbeebbeb: queryA 863:AIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH: 928 :********************************* **************: 7bw4_A_1 854:AIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELXXXXXXXXXXXXXXXXXXXYWEPEFYEAMYTPH: 919 SecStr :HHHTSGGGGSS HHHHHHHHHHHHHHHHHHHH ------------------- STHHHHGGGS : ExpBur :bbebbbbeeeeeeeebebbebbbebbeebeeee-------------------eeeeeebeebbeee: |