#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [814 aa] | Replicase polyprotein 1ab :R1AB_SARS2 | |
2 | b | E 1 (T) | polymer(polyribonucleotide) | Template RNA | 496N 500K 501S 507N 511K 541Q 543N 545K 557V 558A 559G 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 689Y 857E 860V 861S 914R 915Y 920F 924M (identity: 100.0 %/97.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ozu_A_1 identity=97.8% |
queryA 31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------: 117 :******************** : 7ozu_A_1 31:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX: 63 SecStr : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------: ExpBur :eebbebeeeeebbbbbebee--------------------------------------------------------------------------------: queryA 118:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163 : **********************************************: 7ozu_A_1 64:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163 SecStr :------------------------------------------------------ S BHHHHHHHHHS BTTB HHHHHHHHHTTSS HHHHHSTTSS: ExpBur :------------------------------------------------------eebebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebb: queryA 164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263 :****************************************************************************************************: 7ozu_A_1 164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263 SecStr : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B GGGBBTTS B S EE STTT B HHHHHHHHHHHHHTTGGGGGGBGGG SSS: ExpBur :bbbebeebbebbeebbeebbebbeebbebbeebeeebbebbbbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbebeeeeeee: queryA 264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 363 :************************************************************************************************** : 7ozu_A_1 264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 363 SecStr : B TT HHHHHHHHHHTSTT S SSGGG SSHHHHHHHHHHHHHHTSSS TTSSEEEEEEEEETTEEEEEEEEEEETTTEEEE S --: ExpBur :eeeeeeeeeeebbeebeebbeebbebbeeebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebeeeeeeeebbbbbbbebbbbbebeeeee--: queryA 364:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463 : *************************************************************************************************: 7ozu_A_1 364:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463 SecStr :--- HHHHHHHHH HHHHHHHSB TT SS EEEESSSS B HHHHHHHHHTT S TT S B B TTHHHHHHGGGGG : ExpBur :---eebeebbeebbbbebeeeeeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbeeebebebebebeeeebebbbebbbebebbeebb: queryA 464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563 :****************************************************************************************************: 7ozu_A_1 464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563 SecStr : HHHHHHHHHHHHHTTSSS GGG S SSS BTGGGT HHHHHHHS HHHHHHHHHHHTTS EEEEEE BSS EEEE HH: ExpBur :bbbbbbbbbbbbbbbbbeebebbebebeebeeeebeeebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebebbbb: Contact : b bb b b b b b bbb queryA 564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663 :****************************************************************************************************: 7ozu_A_1 564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663 SecStr :HHHHHHHHHHHHHHHHHT SSSB TT STTTHHHHHHHHHTTT SSEEEEEE TTHHHH HHHHHHHHHHHTTT TTTS HHHHHHHHHHHHHHTT: ExpBur :bbbbbebbbbebbebbeeeeebbbbbeeeeeebbbbebbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbb: Contact : b b b b b bb queryA 664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763 :****************************************************************************************************: 7ozu_A_1 664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763 SecStr :T EEEETTEEEE S TT TTHHHHHHHHHHHHHHHHHHHHHHHS STT HHHHHHHHHHHHHHSS S HHHHHHHHHHHHHHEEEEEETTEEE: ExpBur :bbbbbbeebbbebebbbbeebebbebbbbbbbbbbbbbbbbbbbbbbebeebeeeebeebbeebbebbbeeeeeeeebbebbbebbeebbbbbbebeebb: Contact : bbbb b queryA 764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863 :****************************************************************************************************: 7ozu_A_1 764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863 SecStr :EEEEHHHHHHTSS HHHHHHHHHHTT GGG EEES TTT S BTTBEEEEEEETTEEEEEEE HHHHHHHHH SSGGGGSSHHHHHHHHHHH: ExpBur :bbbbeebbeebbbbbbebbbbbbbbbbbbbbeeeebbeeeebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeeeeeeeebbeebbebb: Contact : b bb queryA 864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :********************************* ********************: 7ozu_A_1 864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 929 SecStr :HHTSGGGGSSSHHHHHHHHHHHHHHHHHHHHH ------------- GGGGTSHHHHHGGGSTT : ExpBur :bebbbbeebeeeeebebbebbbebbeebbeeee-------------eeeeeeeeeebbeebbeeee: Contact : bb b b |