[pdbjlvh2]Protein Model on 7ctt_A_1_E

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7ctt_A_1_E_1

Protein Model on 7ctt_A_1_E_1 (TEMPLATE: 7ctt )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [826 aa]	RNA-directed RNA polymerase :R1AB_SARS2
2	b		E 1 (Q)	polymer(polyribonucleotide)	Primer-RNA (5'-R(PUPUPCPUPCPCPUPAPAPGPAPAPGPCPUPA)-3')	499D 513R 758L 759S 760D 761D 813C 814S 815Q 836R 840A 845D 847I 857E 858R 861S 862L 865D (identity: 100.0 %/92.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7ctt_A_1 identity=92.0%

queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYA: 130
                :********************                                 *****************                 *************:
7ctt_A_1      31:VYRAFDIYNDKVAGFAKFLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIYNLLKDCPAVAKHDXXXXXXXXXXXXXXXXXRLTKYTMADLVYA: 130
SecStr          : EEEEEEE SS EEEEEEE ---------------------------------  GGGGSTTSTTB    -----------------   SSBHHHHHHH:    
ExpBur          :eeebbbbeeeebbbbbebee---------------------------------eebbeebeebebbbeee-----------------eeeebbbbbbbbb:    

queryA       131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
                :****************************************************************************************************:
7ctt_A_1     131:LRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSG: 230
SecStr          :HHS  TTSTHHHHHHHTTTTSS GGGSSSTT S SSS TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEE  GGGSBSSS B    S EE  TT  :    
ExpBur          :bbbbeeeebebbeebbeebebbeeebbeeeebbbbbebeebbebbbebbbebbebbeebbebbebbeebbbebebbbbbbbbebbbeebeebeeeeeeeb:    

queryA       231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
                :****************************************************************************************************:
7ctt_A_1     231:VPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLV: 330
SecStr          : EE HHHHHHHHHHHHHTTGGGGGGBGGG TTS B    TT    HHHHHHHHHHH TT  S   SSGGG SSHHHHHHHHHHHHHHTSSS TTS EEEE:    
ExpBur          :ebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbbbbeeebbbbbeebeebbbbbbbbbbbbbbbebbbeebbbbbe:    

queryA       331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
                :****************************************************************************************************:
7ctt_A_1     331:RKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFK: 430
SecStr          :EEEEESSSEEEEEEEEE SSS EEE SS  SEE S  HHHHHHHHH HHHHHTSSEE   TT SS EEEESSSS     B   EE HHHHHHHHTTT S :    
ExpBur          :eebebeeeeeebbbbbbbebbbbbebeeeeeebeeeeebeebbbebbbbebeeeeeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbe:    

queryA       431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
                :****************************************************************************************************:
7ctt_A_1     431:EGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAY: 530
SecStr          :TT S     B   B TTSHHHHHGGGGG       HHHHHHHHHHHHHHT SS      GGG       S   TTTTTT  HHHHHHHS HHHHHHHHHH:    
ExpBur          :eeeebebebebeebeeebbbebbbebebbbebbbbbbbbbbbbbbbbebbeebebbbbebeeeebeeeeeebbbbbeeeeebeebbeebeeeebeebbeb:    
Contact         :                                                                    b             b                 

queryA       531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
                :****************************************************************************************************:
7ctt_A_1     531:TKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNML: 630
SecStr          :HTTS    EEEEEE    BSSS   EEEE  HHHHHHHHHHHTTHHHHHTT  SSSB TT  STTTHHHHHHHHHHTT SSEEEEEE  TTTTTS  HHH:    
ExpBur          :bbebbbbbbbbbebeeebeeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbebebbebbbeebbeebbeebeeeebbbbebbebbbbbbbbb:    

queryA       631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
                :****************************************************************************************************:
7ctt_A_1     631:RIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYEC: 730
SecStr          :HHHHHHHHHTT TTT  HHHHHHHHHHHHHHHTS EEEETTEEEE  S   TTSTTHHHHHHHHHHHHHHHHHHHHHHTS GGG S HHHHHHHHHHHHH:    
ExpBur          :bbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbbbbbbbbbbbbbbeebeeeebeebbeebbeb:    

queryA       731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
                :****************************************************************************************************:
7ctt_A_1     731:LYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLP: 830
SecStr          :HHS  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS  HHHHHHHHHHTT     TTS EEE  SSS  S SSS B  EEESSSSEEE  :    
ExpBur          :bbeeeeeeeebbebbbebbeebbbbbbebebbbbbbbeebbeebbbbbbebbbbbbbbbbbbbbeeeebbebeeeeebbeebeebbbbebebeeeebbbb:    
Contact         :                           bbbb                                                   bbb               

queryA       831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPH: 928
                :**************************************************************                      **************:
7ctt_A_1     831:YPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHXXXXXXXXXXXXXXXXXXXXXXYWEPEFYEAMYTPH: 928
SecStr          :B  HHHHHHHHHEESSSTTS SHHHHHHHHHHHHHHGGGGGSS HHHHHHHHHHHHHHH   ----------------------  STTTTTTTSS  :    
ExpBur          :bbebbebbbbbbbbeeebeeeeeebeebbbebbbebbbbeebeeeeebebbebbbebbeeee----------------------eeeeeebeebbeee:    
Contact         :     b   b    b b         bb  bb  b

Protein Model on 7ctt_A_1_E_1 (TEMPLATE: 7ctt )

Input Residue Numbers for Focused Sites