[pdbjlvh2]Protein Model on 7b3d_A_1_E

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 7b3d_A_1_E_1

Protein Model on 7b3d_A_1_E_1 (TEMPLATE: 7b3d )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [814 aa]	SARS-CoV-2 RNA-dependent RNA polymerase nsp12 :R1AB_SARS2
2	b		E 1 (T)	polymer(polyribonucleotide)	RNA (5'-R(PUPGPCPAPCPUPGPCPGPUPAPG)-3')	496N 500K 501S 507N 511K 541Q 543N 545K 557V 558A 559G 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 689Y 857E 860V 861S 914R 915Y 924M (identity: 100.0 %/97.8 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7b3d_A_1 identity=97.8%

queryA        31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------: 117
                :********************                                                                                :
7b3d_A_1      34:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX:  66
SecStr          : EEEEEEESSS EEEEEEE --------------------------------------------------------------------------------:    
ExpBur          :eeebebeeeeebbbbbebee--------------------------------------------------------------------------------:    

queryA       118:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163
                :                                                      **********************************************:
7b3d_A_1      67:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 166
SecStr          :------------------------------------------------------   SSBHHHHHHHHHS BTTB HHHHHHHHHTTSS HHHHHSTT S:    
ExpBur          :------------------------------------------------------eebebbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebb:    

queryA       164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263
                :****************************************************************************************************:
7b3d_A_1     167:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 266
SecStr          : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B  GGGBBTTS B   SS EE STT    B HHHHHHHHHHHHHHTGGGGGGBGGG SSS:    
ExpBur          :bbbebeebbebbeebbeebbebbbebbebbeebeeebbebbbbbbbbbbebebeeeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeee:    

queryA       264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 363
                :**************************************************************************************************  :
7b3d_A_1     267:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 366
SecStr          : B    TT    HHHHHHHHHHHSTT  S   SSGGG SSHHHHHHHHHHHHHHHTTS GGGSEEEEEEEEETTEEEEEEEEEEETTTEEEE TT   --:    
ExpBur          :eeeeeeeeeeebbebbeebbeebbebbeeebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebeeeeeeeebbbbbbbebbbbbebeeeee--:    

queryA       364:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463
                :   *************************************************************************************************:
7b3d_A_1     367:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 466
SecStr          :--- HHHHHHHHH HHHHHHHSEE   TT SSEEEEESSSS     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHHGGGG     :    
ExpBur          :---eeeeebbeebbbbebeeebeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebebbbebb:    

queryA       464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563
                :****************************************************************************************************:
7b3d_A_1     467:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 566
SecStr          :  HHHHHHHHHHHHHTTSS       GGG   S SSSB  TTGGGT BHHHHHHHS HHHHHHHHHHHTTS    EEEEEE    BSSS   EEEE  HH:    
ExpBur          :bbbbbbbbbbbbbbebbeebebbebebeebebeeeeeebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbeeeeebbeeeebebebebbbb:    
Contact         :                                b   bb     b   b                             b b b           bbb    

queryA       564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663
                :****************************************************************************************************:
7b3d_A_1     567:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 666
SecStr          :HHHHHHHHHHHHHHHHHT  SSSB TT  STTTHHHHHHHHHHTT SSEEEEEE  TTHHHH  HHHHHHHHHHHHGGGTTTS HHHHHHHHHHHHHHTT:    
ExpBur          :bbbbbebbbbebbebbeeeeebbbbbebeebebbbeebbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbb:    
Contact         :     b       b  b         b b bb                                                                    

queryA       664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763
                :****************************************************************************************************:
7b3d_A_1     667:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 766
SecStr          :S EEEETTEEEE  S   TTSTTHHHHHHHHHHHHHHHHHHHHHHHS SSS   HHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEE:    
ExpBur          :bbbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbbbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebeebbeebbbbbbebebbb:    
Contact         :                  bbbb   b                                                                          

queryA       764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863
                :****************************************************************************************************:
7b3d_A_1     767:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 866
SecStr          :EEEEHHHHHTTSS  HHHHHHHHHHTT     GGG EEES TTT  S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSGGGSSSTHHHHHHHHHH:    
ExpBur          :bbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebbebeeeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeeeeebbeebbebb:    
Contact         :                                                                                             b  bb  

queryA       864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :*********************************             ********************:
7b3d_A_1     867:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 932
SecStr          :HHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHH ------------- TTHHHHSTHHHHHHTSTT :    
ExpBur          :bebbbbeebeeeebbebbebbbebbeebeeeee-------------eebeeebeeebbeebbeeee:    
Contact         :                                                  bb        b

Protein Model on 7b3d_A_1_E_1 (TEMPLATE: 7b3d )

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