HOMCOS(prot_sch_conbars.cgi):

		Contact Molecules for Homologous Proteins
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PID

QueryLength

Homolgous Sequence in PDB

UniProt Query

TITLE

2691701

207

P51149(RAB7A_HUMAN)

RecName: Full=Ras-related protein Rab-7a ; EC=3.6.5.2 ;

QUERYSEQ

MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIP
YFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKASAESCSC

[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P51149(RAB7A_HUMAN)]

207
	region	name	description
	2-207	CHAIN	/note="Ras-related protein Rab-7a" /id="PRO_0000121121"
	15-22	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	34-40	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	63-67	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	125-128	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	156-157	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	205-205	LIPID	/note="S-geranylgeranyl cysteine"
	207-207	LIPID	/note="S-geranylgeranyl cysteine"
	1-207	DISORDER	predicted by DISOPRED

MONOMER

207

pdb_id a¹ identity[%]² description

1vg8 D 100.0 RAB7_RAT Ras-related protein Rab-7

1vg8 A 100.0 RAB7_RAT Ras-related protein Rab-7

1vg0 B 100.0 RAB7_RAT Ras-related protein Rab-7

1yhn A 99.5 RAB7_HUMAN Ras-related protein Rab-7

1vg8 B 100.0 RAB7_RAT Ras-related protein Rab-7

1vg8 C 100.0 RAB7_RAT Ras-related protein Rab-7

3law C 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

3law A 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

6wcw A 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

3law D 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

1t91 A 99.4 RAB7_HUMAN Ras-related protein Rab-7

1t91 D 99.4 RAB7_HUMAN Ras-related protein Rab-7

1t91 C 99.4 RAB7_HUMAN Ras-related protein Rab-7

1t91 B 99.4 RAB7_HUMAN Ras-related protein Rab-7

3law E 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

3law B 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

1vg9 D 100.0 RAB7_RAT Ras-related protein Rab-7

1vg9 H 100.0 RAB7_RAT Ras-related protein Rab-7

7f6j B 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

5z2m B 99.4 RAB7A_MOUSE Ras-related protein Rab-7a

7f6j A 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

1vg9 B 100.0 RAB7_RAT Ras-related protein Rab-7

6iyb C 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

6iyb A 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

1vg9 F 100.0 RAB7_RAT Ras-related protein Rab-7

5z2m C 99.4 RAB7A_MOUSE Ras-related protein Rab-7a

1vg1 A 100.0 RAB7_RAT Ras-related protein Rab-7

5ldd C 85.1 G0SGE1_CHATD Rab small monomeric GTPase-like protein

5ldd F 84.2 G0SGE1_CHATD Rab small monomeric GTPase-like protein

1ky2 A 70.1 YPT7_YEAST GTP-BINDING PROTEIN YPT7P

4phg A 68.4 YPT7_YEAST GTP-binding protein YPT7

4phh A 69.5 YPT7_YEAST GTP-binding protein YPT7

4phh B 69.3 YPT7_YEAST GTP-binding protein YPT7

4phh C 71.2 YPT7_YEAST GTP-binding protein YPT7

4phh D 69.6 YPT7_YEAST GTP-binding protein YPT7

1ky3 A 67.3 YPT7_YEAST GTP-BINDING PROTEIN YPT7P

1wms A 57.8 RAB9A_HUMAN Ras-related protein Rab-9A

4phf A 67.3 YPT7_YEAST GTP-binding protein YPT7

2ocb A 57.1 RAB9B_HUMAN Ras-related protein Rab-9B

1s8f B 57.1 RAB9A_CANFA Ras-related protein Rab-9A

7e1t B 56.5 RAB9A_HUMAN Ras-related protein Rab-9A

1yzl A 55.3 RAB9A_MOUSE Ras-related protein Rab-9A

1s8f A 58.2 RAB9A_CANFA Ras-related protein Rab-9A

7e1t A 56.9 RAB9A_HUMAN Ras-related protein Rab-9A

4qxa A 54.7 RAB9A_MOUSE Ras-related protein Rab-9A

1wms B 59.1 RAB9A_HUMAN Ras-related protein Rab-9A

1.a¹:asym_id for the homologue. 2.identity[%]²:sequence identity between the query and the homologue.

HETERO

207 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

1vg0 A RAE1_RAT Rab proteins geranylgeranyltransferase component A.. B 100.0
/100.0 24
/24 RAB7_RAT Ras-related protein Rab-7

1vg9 A RAE1_RAT Rab proteins geranylgeranyltransferase component A.. B 100.0
/100.0 19
/19 RAB7_RAT Ras-related protein Rab-7

1vg9 C RAE1_RAT Rab proteins geranylgeranyltransferase component A.. D 100.0
/100.0 18
/18 RAB7_RAT Ras-related protein Rab-7

1vg9 E RAE1_RAT Rab proteins geranylgeranyltransferase component A.. F 100.0
/100.0 19
/19 RAB7_RAT Ras-related protein Rab-7

1vg9 G RAE1_RAT Rab proteins geranylgeranyltransferase component A.. H 100.0
/100.0 19
/19 RAB7_RAT Ras-related protein Rab-7

1yhn B RILP_HUMAN Rab interacting lysosomal protein[65 aa] A 100.0
/99.5 13
/13 RAB7_HUMAN Ras-related protein Rab-7

1yhn B RILP_HUMAN Rab interacting lysosomal protein[65 aa] A 100.0
/99.5 17
/17 RAB7_HUMAN Ras-related protein Rab-7

1yhn B RILP_HUMAN Rab interacting lysosomal protein[65 aa] A 100.0
/99.5 17
/17 RAB7_HUMAN Ras-related protein Rab-7

1yhn B RILP_HUMAN Rab interacting lysosomal protein[65 aa] A 100.0
/99.5 13
/13 RAB7_HUMAN Ras-related protein Rab-7

6wcw B RUBIC_HUMAN Run domain Beclin-1-interacting and cysteine-rich .. A 100.0
/99.4 18
/18 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j C PDZD8_HUMAN PDZ domain-containing protein 8[106 aa] A 100.0
/99.4 26
/26 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j C PDZD8_HUMAN PDZ domain-containing protein 8[106 aa] B 100.0
/99.4 19
/19 RAB7A_HUMAN Ras-related protein Rab-7a

6iyb B OSBL1_HUMAN Oxysterol-binding protein-related protein 1[135 aa.. A 100.0
/99.4 12
/12 RAB7A_HUMAN Ras-related protein Rab-7a

6iyb D OSBL1_HUMAN Oxysterol-binding protein-related protein 1[135 aa.. C 100.0
/99.4 11
/11 RAB7A_HUMAN Ras-related protein Rab-7a

5z2m A OSBL1_MOUSE Oxysterol-binding protein-related protein 1[137 aa.. B 88.9
/99.4 9
/9 RAB7A_MOUSE Ras-related protein Rab-7a

5z2m D OSBL1_MOUSE Oxysterol-binding protein-related protein 1[136 aa.. C 100.0
/99.4 7
/7 RAB7A_MOUSE Ras-related protein Rab-7a

5ldd A G0SGS3_CHATD Mon1[155 aa] C 95.0
/85.1 20
/20 G0SGE1_CHATD Rab small monomeric GTPase-like protein

5ldd D G0SGS3_CHATD Mon1[143 aa] F 95.2
/84.2 21
/21 G0SGE1_CHATD Rab small monomeric GTPase-like protein

5ldd B G0SD94_CHATD Ccz1[166 aa] C 100.0
/85.1 6
/6 G0SGE1_CHATD Rab small monomeric GTPase-like protein

5ldd E G0SD94_CHATD Ccz1[165 aa] F 100.0
/84.2 5
/5 G0SGE1_CHATD Rab small monomeric GTPase-like protein

7e1t C NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom.. A 40.0
/56.9 5
/5 RAB9A_HUMAN Ras-related protein Rab-9A

7e1t C NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom.. B 72.7
/56.5 11
/11 RAB9A_HUMAN Ras-related protein Rab-9A

7e1t D NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom.. A 72.7
/56.9 11
/11 RAB9A_HUMAN Ras-related protein Rab-9A

7e1t D NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom.. B 50.0
/56.5 6
/6 RAB9A_HUMAN Ras-related protein Rab-9A

4qxa B SGSM1_MOUSE Small G protein signaling modulator 1[147 aa] A 72.7
/54.7 11
/11 RAB9A_MOUSE Ras-related protein Rab-9A

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

COMPOUND

207 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

1ky2 C GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. A 90.0
/70.1 20
/20 YPT7_YEAST GTP-BINDING PROTEIN YPT7P

1vg8 F GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. A 100.0
/100.0 22
/22 RAB7_RAT Ras-related protein Rab-7

1vg8 H GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. B 100.0
/100.0 24
/24 RAB7_RAT Ras-related protein Rab-7

1vg8 J GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. C 100.0
/100.0 24
/24 RAB7_RAT Ras-related protein Rab-7

1vg8 L GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. D 100.0
/100.0 23
/23 RAB7_RAT Ras-related protein Rab-7

1yzl C GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. A 70.8
/55.3 24
/24 RAB9A_MOUSE Ras-related protein Rab-9A

2ocb C GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. A 70.8
/57.1 24
/24 RAB9B_HUMAN Ras-related protein Rab-9B

3law G GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. A 95.7
/99.4 23
/23 RAB7A_HUMAN Ras-related protein Rab-7a

3law I GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. B 95.2
/99.4 21
/21 RAB7A_HUMAN Ras-related protein Rab-7a

3law K GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. C 95.7
/99.4 23
/23 RAB7A_HUMAN Ras-related protein Rab-7a

3law M GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. D 96.0
/99.4 25
/25 RAB7A_HUMAN Ras-related protein Rab-7a

3law O GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. E 95.8
/99.4 24
/24 RAB7A_HUMAN Ras-related protein Rab-7a

1t91 F GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.4 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1t91 H GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] B 100.0
/99.4 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1t91 J GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] C 100.0
/99.4 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1t91 L GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] D 100.0
/99.4 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1yhn D GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.5 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1yhn D GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.5 23
/23 RAB7_HUMAN Ras-related protein Rab-7

4qxa C GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 69.2
/54.7 26
/26 RAB9A_MOUSE Ras-related protein Rab-9A

5z2m F GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] B 100.0
/99.4 23
/23 RAB7A_MOUSE Ras-related protein Rab-7a

5z2m G GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] C 100.0
/99.4 24
/24 RAB7A_MOUSE Ras-related protein Rab-7a

6iyb F GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.4 25
/25 RAB7A_HUMAN Ras-related protein Rab-7a

6iyb H GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] C 100.0
/99.4 22
/22 RAB7A_HUMAN Ras-related protein Rab-7a

6wcw C GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.4 23
/23 RAB7A_HUMAN Ras-related protein Rab-7a

7e1t F GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 66.7
/56.9 24
/24 RAB9A_HUMAN Ras-related protein Rab-9A

7e1t H GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] B 70.8
/56.5 24
/24 RAB9A_HUMAN Ras-related protein Rab-9A

7f6j E GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.4 24
/24 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j G GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] B 100.0
/99.4 23
/23 RAB7A_HUMAN Ras-related protein Rab-7a

4phh E 2UK
5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phos.. A 90.0
/69.5 20
/20 YPT7_YEAST GTP-binding protein YPT7

4phh H 2UK
5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phos.. B 89.5
/69.3 19
/19 YPT7_YEAST GTP-binding protein YPT7

4phh K 2UK
5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phos.. C 90.9
/71.2 22
/22 YPT7_YEAST GTP-binding protein YPT7

4phh M 2UK
5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phos.. D 90.9
/69.6 22
/22 YPT7_YEAST GTP-binding protein YPT7

4phg C 2UJ
N-[3-(propanoylamino)propyl]guanosine 5'-(tetrahyd.. A 91.3
/68.4 23
/23 YPT7_YEAST GTP-binding protein YPT7

4phf B 2UH
N-[3-(propanoylamino)propyl]guanosine 5'-(trihydro.. A 87.5
/67.3 16
/16 YPT7_YEAST GTP-binding protein YPT7

1ky3 C GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] A 93.3
/67.3 15
/15 YPT7_YEAST GTP-BINDING PROTEIN YPT7P

1s8f D GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] A 82.4
/58.2 17
/17 RAB9A_CANFA Ras-related protein Rab-9A

1s8f D GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] A 82.4
/58.2 17
/17 RAB9A_CANFA Ras-related protein Rab-9A

1s8f K GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] B 81.2
/57.1 16
/16 RAB9A_CANFA Ras-related protein Rab-9A

1s8f K GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] B 81.2
/57.1 16
/16 RAB9A_CANFA Ras-related protein Rab-9A

1vg0 F GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] B 100.0
/100.0 17
/17 RAB7_RAT Ras-related protein Rab-7

1vg1 C GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] A 100.0
/100.0 16
/16 RAB7_RAT Ras-related protein Rab-7

1vg9 K GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] B 100.0
/100.0 18
/18 RAB7_RAT Ras-related protein Rab-7

1vg9 O GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] D 100.0
/100.0 16
/16 RAB7_RAT Ras-related protein Rab-7

1vg9 S GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] F 100.0
/100.0 18
/18 RAB7_RAT Ras-related protein Rab-7

1vg9 W GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] H 100.0
/100.0 16
/16 RAB7_RAT Ras-related protein Rab-7

1wms C GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] A 76.5
/57.8 17
/17 RAB9A_HUMAN Ras-related protein Rab-9A

1wms D GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] B 76.5
/59.1 17
/17 RAB9A_HUMAN Ras-related protein Rab-9A

1s8f E BEZ
BENZOIC ACID[9 atoms] A 50.0
/58.2 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1s8f E BEZ
BENZOIC ACID[9 atoms] A 100.0
/58.2 4
/4 RAB9A_CANFA Ras-related protein Rab-9A

1s8f E BEZ
BENZOIC ACID[9 atoms] A 100.0
/58.2 4
/4 RAB9A_CANFA Ras-related protein Rab-9A

1s8f E BEZ
BENZOIC ACID[9 atoms] A 50.0
/58.2 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1s8f F BEZ
BENZOIC ACID[9 atoms] A 100.0
/58.2 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1s8f F BEZ
BENZOIC ACID[9 atoms] A 100.0
/58.2 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1s8f G BEZ
BENZOIC ACID[9 atoms] A 75.0
/58.2 4
/4 RAB9A_CANFA Ras-related protein Rab-9A

1s8f G BEZ
BENZOIC ACID[9 atoms] A 75.0
/58.2 4
/4 RAB9A_CANFA Ras-related protein Rab-9A

1s8f E BEZ
BENZOIC ACID[9 atoms] B 100.0
/57.1 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1s8f E BEZ
BENZOIC ACID[9 atoms] B 100.0
/57.1 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1s8f F BEZ
BENZOIC ACID[9 atoms] B 75.0
/57.1 4
/4 RAB9A_CANFA Ras-related protein Rab-9A

1s8f F BEZ
BENZOIC ACID[9 atoms] B 75.0
/57.1 4
/4 RAB9A_CANFA Ras-related protein Rab-9A

1s8f G BEZ
BENZOIC ACID[9 atoms] B 100.0
/57.1 1
/1 RAB9A_CANFA Ras-related protein Rab-9A

1s8f G BEZ
BENZOIC ACID[9 atoms] B 100.0
/57.1 1
/1 RAB9A_CANFA Ras-related protein Rab-9A

1s8f L BEZ
BENZOIC ACID[9 atoms] B 66.7
/57.1 9
/9 RAB9A_CANFA Ras-related protein Rab-9A

1s8f L BEZ
BENZOIC ACID[9 atoms] B 66.7
/57.1 9
/9 RAB9A_CANFA Ras-related protein Rab-9A

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

METAL

207 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

1vg9 J K
POTASSIUM ION[1 atoms] B 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1vg9 N K
POTASSIUM ION[1 atoms] D 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1vg9 R K
POTASSIUM ION[1 atoms] F 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1vg9 V K
POTASSIUM ION[1 atoms] H 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1ky2 B MG
MAGNESIUM ION[1 atoms] A 100.0
/70.1 2
/2 YPT7_YEAST GTP-BINDING PROTEIN YPT7P

1ky3 B MG
MAGNESIUM ION[1 atoms] A 100.0
/67.3 1
/1 YPT7_YEAST GTP-BINDING PROTEIN YPT7P

1s8f H MG
MAGNESIUM ION[1 atoms] B 0.0
/57.1 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1s8f H MG
MAGNESIUM ION[1 atoms] B 0.0
/57.1 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1t91 E MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 2
/2 RAB7_HUMAN Ras-related protein Rab-7

1t91 G MG
MAGNESIUM ION[1 atoms] B 100.0
/99.4 2
/2 RAB7_HUMAN Ras-related protein Rab-7

1t91 I MG
MAGNESIUM ION[1 atoms] C 100.0
/99.4 2
/2 RAB7_HUMAN Ras-related protein Rab-7

1t91 K MG
MAGNESIUM ION[1 atoms] D 100.0
/99.4 2
/2 RAB7_HUMAN Ras-related protein Rab-7

1vg0 E MG
MAGNESIUM ION[1 atoms] B 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg1 B MG
MAGNESIUM ION[1 atoms] A 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1vg8 E MG
MAGNESIUM ION[1 atoms] A 100.0
/100.0 3
/3 RAB7_RAT Ras-related protein Rab-7

1vg8 G MG
MAGNESIUM ION[1 atoms] B 100.0
/100.0 3
/3 RAB7_RAT Ras-related protein Rab-7

1vg8 I MG
MAGNESIUM ION[1 atoms] C 100.0
/100.0 3
/3 RAB7_RAT Ras-related protein Rab-7

1vg8 K MG
MAGNESIUM ION[1 atoms] D 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg9 I MG
MAGNESIUM ION[1 atoms] B 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg9 M MG
MAGNESIUM ION[1 atoms] D 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg9 Q MG
MAGNESIUM ION[1 atoms] F 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg9 U MG
MAGNESIUM ION[1 atoms] H 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1yhn C MG
MAGNESIUM ION[1 atoms] A 100.0
/99.5 5
/5 RAB7_HUMAN Ras-related protein Rab-7

1yhn C MG
MAGNESIUM ION[1 atoms] A 100.0
/99.5 5
/5 RAB7_HUMAN Ras-related protein Rab-7

1yzl B MG
MAGNESIUM ION[1 atoms] A 66.7
/55.3 3
/3 RAB9A_MOUSE Ras-related protein Rab-9A

2ocb B MG
MAGNESIUM ION[1 atoms] A 66.7
/57.1 3
/3 RAB9B_HUMAN Ras-related protein Rab-9B

3law F MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

3law H MG
MAGNESIUM ION[1 atoms] B 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

3law J MG
MAGNESIUM ION[1 atoms] C 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

3law L MG
MAGNESIUM ION[1 atoms] D 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

3law N MG
MAGNESIUM ION[1 atoms] E 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

4phf C MG
MAGNESIUM ION[1 atoms] A 100.0
/67.3 1
/1 YPT7_YEAST GTP-binding protein YPT7

4phg B MG
MAGNESIUM ION[1 atoms] A 100.0
/68.4 3
/3 YPT7_YEAST GTP-binding protein YPT7

4phh F MG
MAGNESIUM ION[1 atoms] A 100.0
/69.5 3
/3 YPT7_YEAST GTP-binding protein YPT7

4phh I MG
MAGNESIUM ION[1 atoms] B 100.0
/69.3 3
/3 YPT7_YEAST GTP-binding protein YPT7

4phh L MG
MAGNESIUM ION[1 atoms] C 100.0
/71.2 3
/3 YPT7_YEAST GTP-binding protein YPT7

4phh N MG
MAGNESIUM ION[1 atoms] D 100.0
/69.6 3
/3 YPT7_YEAST GTP-binding protein YPT7

4qxa D MG
MAGNESIUM ION[1 atoms] A 66.7
/54.7 3
/3 RAB9A_MOUSE Ras-related protein Rab-9A

5z2m E MG
MAGNESIUM ION[1 atoms] B 100.0
/99.4 3
/3 RAB7A_MOUSE Ras-related protein Rab-7a

6iyb E MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 2
/2 RAB7A_HUMAN Ras-related protein Rab-7a

6iyb G MG
MAGNESIUM ION[1 atoms] C 100.0
/99.4 3
/3 RAB7A_HUMAN Ras-related protein Rab-7a

6wcw D MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 5
/5 RAB7A_HUMAN Ras-related protein Rab-7a

7e1t E MG
MAGNESIUM ION[1 atoms] A 66.7
/56.9 3
/3 RAB9A_HUMAN Ras-related protein Rab-9A

7e1t G MG
MAGNESIUM ION[1 atoms] B 66.7
/56.5 3
/3 RAB9A_HUMAN Ras-related protein Rab-9A

7f6j D MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 3
/3 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j F MG
MAGNESIUM ION[1 atoms] B 100.0
/99.4 2
/2 RAB7A_HUMAN Ras-related protein Rab-7a

1s8f J CL
CHLORIDE ION[1 atoms] B 0.0
/57.1 4
/4 RAB9A_CANFA Ras-related protein Rab-9A

1s8f J CL
CHLORIDE ION[1 atoms] B 0.0
/57.1 4
/4 RAB9A_CANFA Ras-related protein Rab-9A

4phh G CL
CHLORIDE ION[1 atoms] A 0.0
/69.5 1
/1 YPT7_YEAST GTP-binding protein YPT7

4phh J CL
CHLORIDE ION[1 atoms] B 80.0
/69.3 5
/5 YPT7_YEAST GTP-binding protein YPT7

4phh O CL
CHLORIDE ION[1 atoms] D 75.0
/69.6 4
/4 YPT7_YEAST GTP-binding protein YPT7

4phg D YT3
YTTRIUM (III) ION[1 atoms] A 0.0
/68.4 1
/1 YPT7_YEAST GTP-binding protein YPT7

4phg E YT3
YTTRIUM (III) ION[1 atoms] A 100.0
/68.4 2
/2 YPT7_YEAST GTP-binding protein YPT7

4phg F YT3
YTTRIUM (III) ION[1 atoms] A 100.0
/68.4 1
/1 YPT7_YEAST GTP-binding protein YPT7

1s8f C SR
STRONTIUM ION[1 atoms] A 0.0
/58.2 1
/1 RAB9A_CANFA Ras-related protein Rab-9A

1s8f C SR
STRONTIUM ION[1 atoms] A 0.0
/58.2 1
/1 RAB9A_CANFA Ras-related protein Rab-9A

1s8f I SR
STRONTIUM ION[1 atoms] B 66.7
/57.1 3
/3 RAB9A_CANFA Ras-related protein Rab-9A

1s8f I SR
STRONTIUM ION[1 atoms] B 66.7
/57.1 3
/3 RAB9A_CANFA Ras-related protein Rab-9A

1s8f I SR
STRONTIUM ION[1 atoms] B 66.7
/57.1 3
/3 RAB9A_CANFA Ras-related protein Rab-9A

1s8f I SR
STRONTIUM ION[1 atoms] B 66.7
/57.1 3
/3 RAB9A_CANFA Ras-related protein Rab-9A

2ocb D UNX
UNKNOWN ATOM OR ION[1 atoms] A 0.0
/57.1 1
/1 RAB9B_HUMAN Ras-related protein Rab-9B

2ocb E UNX
UNKNOWN ATOM OR ION[1 atoms] A 25.0
/57.1 4
/4 RAB9B_HUMAN Ras-related protein Rab-9B

2ocb F UNX
UNKNOWN ATOM OR ION[1 atoms] A 33.3
/57.1 3
/3 RAB9B_HUMAN Ras-related protein Rab-9B

2ocb G UNX
UNKNOWN ATOM OR ION[1 atoms] A 50.0
/57.1 4
/4 RAB9B_HUMAN Ras-related protein Rab-9B

2ocb H UNX
UNKNOWN ATOM OR ION[1 atoms] A 100.0
/57.1 2
/2 RAB9B_HUMAN Ras-related protein Rab-9B

2ocb I UNX
UNKNOWN ATOM OR ION[1 atoms] A 100.0
/57.1 2
/2 RAB9B_HUMAN Ras-related protein Rab-9B

2ocb J UNX
UNKNOWN ATOM OR ION[1 atoms] A 0.0
/57.1 2
/2 RAB9B_HUMAN Ras-related protein Rab-9B

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

HOMO

207 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

1s8f A RAB9A_CANFA Ras-related protein Rab-9A[168 aa] A 50.0
/58.2 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1s8f A RAB9A_CANFA Ras-related protein Rab-9A[168 aa] A 50.0
/58.2 2
/2 RAB9A_CANFA Ras-related protein Rab-9A

1s8f B RAB9A_CANFA Ras-related protein Rab-9A[173 aa] A 66.7
/58.2 18
/18 RAB9A_CANFA Ras-related protein Rab-9A

1s8f B RAB9A_CANFA Ras-related protein Rab-9A[173 aa] A 50.0
/58.2 6
/6 RAB9A_CANFA Ras-related protein Rab-9A

1s8f B RAB9A_CANFA Ras-related protein Rab-9A[173 aa] A 50.0
/58.2 6
/6 RAB9A_CANFA Ras-related protein Rab-9A

1s8f B RAB9A_CANFA Ras-related protein Rab-9A[173 aa] A 66.7
/58.2 18
/18 RAB9A_CANFA Ras-related protein Rab-9A

1s8f A RAB9A_CANFA Ras-related protein Rab-9A[168 aa] B 57.9
/57.1 19
/19 RAB9A_CANFA Ras-related protein Rab-9A

1s8f A RAB9A_CANFA Ras-related protein Rab-9A[168 aa] B 28.6
/57.1 7
/7 RAB9A_CANFA Ras-related protein Rab-9A

1s8f A RAB9A_CANFA Ras-related protein Rab-9A[168 aa] B 28.6
/57.1 7
/7 RAB9A_CANFA Ras-related protein Rab-9A

1s8f A RAB9A_CANFA Ras-related protein Rab-9A[168 aa] B 57.9
/57.1 19
/19 RAB9A_CANFA Ras-related protein Rab-9A

1s8f B RAB9A_CANFA Ras-related protein Rab-9A[173 aa] B 60.0
/57.1 5
/5 RAB9A_CANFA Ras-related protein Rab-9A

1s8f B RAB9A_CANFA Ras-related protein Rab-9A[173 aa] B 60.0
/57.1 5
/5 RAB9A_CANFA Ras-related protein Rab-9A

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

PRECIPITANT

207 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

1vg0 G PG4
TETRAETHYLENE GLYCOL[13 atoms] B 100.0
/100.0 4
/4 RAB7_RAT Ras-related protein Rab-7

1vg9 L P33
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms] B 100.0
/100.0 5
/5 RAB7_RAT Ras-related protein Rab-7

1vg9 P P33
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms] D 100.0
/100.0 5
/5 RAB7_RAT Ras-related protein Rab-7

1vg9 T P33
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms] F 100.0
/100.0 5
/5 RAB7_RAT Ras-related protein Rab-7

1vg9 X P33
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms] H 100.0
/100.0 5
/5 RAB7_RAT Ras-related protein Rab-7

5ldd G SO4
SULFATE ION[5 atoms] C 100.0
/85.1 8
/8 G0SGE1_CHATD Rab small monomeric GTPase-like protein

5ldd H SO4
SULFATE ION[5 atoms] C 80.0
/85.1 5
/5 G0SGE1_CHATD Rab small monomeric GTPase-like protein

5ldd I SO4
SULFATE ION[5 atoms] F 100.0
/84.2 8
/8 G0SGE1_CHATD Rab small monomeric GTPase-like protein

4phf D NO3
NITRATE ION[4 atoms] A 66.7
/67.3 6
/6 YPT7_YEAST GTP-binding protein YPT7

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

MONOMER
207
	pdb_id	a¹	identity[%]²	description
	1vg8	D	100.0	RAB7_RAT Ras-related protein Rab-7
	1vg8	A	100.0	RAB7_RAT Ras-related protein Rab-7
	1vg0	B	100.0	RAB7_RAT Ras-related protein Rab-7
	1yhn	A	99.5	RAB7_HUMAN Ras-related protein Rab-7
	1vg8	B	100.0	RAB7_RAT Ras-related protein Rab-7
	1vg8	C	100.0	RAB7_RAT Ras-related protein Rab-7
	3law	C	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	A	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	6wcw	A	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	D	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	1t91	A	99.4	RAB7_HUMAN Ras-related protein Rab-7
	1t91	D	99.4	RAB7_HUMAN Ras-related protein Rab-7
	1t91	C	99.4	RAB7_HUMAN Ras-related protein Rab-7
	1t91	B	99.4	RAB7_HUMAN Ras-related protein Rab-7
	3law	E	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	B	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	1vg9	D	100.0	RAB7_RAT Ras-related protein Rab-7
	1vg9	H	100.0	RAB7_RAT Ras-related protein Rab-7
	7f6j	B	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	5z2m	B	99.4	RAB7A_MOUSE Ras-related protein Rab-7a
	7f6j	A	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	1vg9	B	100.0	RAB7_RAT Ras-related protein Rab-7
	6iyb	C	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	6iyb	A	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	1vg9	F	100.0	RAB7_RAT Ras-related protein Rab-7
	5z2m	C	99.4	RAB7A_MOUSE Ras-related protein Rab-7a
	1vg1	A	100.0	RAB7_RAT Ras-related protein Rab-7
	5ldd	C	85.1	G0SGE1_CHATD Rab small monomeric GTPase-like protein
	5ldd	F	84.2	G0SGE1_CHATD Rab small monomeric GTPase-like protein
	1ky2	A	70.1	YPT7_YEAST GTP-BINDING PROTEIN YPT7P
	4phg	A	68.4	YPT7_YEAST GTP-binding protein YPT7
	4phh	A	69.5	YPT7_YEAST GTP-binding protein YPT7
	4phh	B	69.3	YPT7_YEAST GTP-binding protein YPT7
	4phh	C	71.2	YPT7_YEAST GTP-binding protein YPT7
	4phh	D	69.6	YPT7_YEAST GTP-binding protein YPT7
	1ky3	A	67.3	YPT7_YEAST GTP-BINDING PROTEIN YPT7P
	1wms	A	57.8	RAB9A_HUMAN Ras-related protein Rab-9A
	4phf	A	67.3	YPT7_YEAST GTP-binding protein YPT7
	2ocb	A	57.1	RAB9B_HUMAN Ras-related protein Rab-9B
	1s8f	B	57.1	RAB9A_CANFA Ras-related protein Rab-9A
	7e1t	B	56.5	RAB9A_HUMAN Ras-related protein Rab-9A
	1yzl	A	55.3	RAB9A_MOUSE Ras-related protein Rab-9A
	1s8f	A	58.2	RAB9A_CANFA Ras-related protein Rab-9A
	7e1t	A	56.9	RAB9A_HUMAN Ras-related protein Rab-9A
	4qxa	A	54.7	RAB9A_MOUSE Ras-related protein Rab-9A
	1wms	B	59.1	RAB9A_HUMAN Ras-related protein Rab-9A
	1.a¹:asym_id for the homologue. 2.identity[%]²:sequence identity between the query and the homologue.

HETERO
207	pdb_id	contact mol		homologue
	pdb_id	a³	description	a⁴	identity[%]⁵	Ncon⁶	description
	1vg0	A	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	B	100.0 /100.0	24 /24	RAB7_RAT Ras-related protein Rab-7
	1vg9	A	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	B	100.0 /100.0	19 /19	RAB7_RAT Ras-related protein Rab-7
	1vg9	C	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	D	100.0 /100.0	18 /18	RAB7_RAT Ras-related protein Rab-7
	1vg9	E	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	F	100.0 /100.0	19 /19	RAB7_RAT Ras-related protein Rab-7
	1vg9	G	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	H	100.0 /100.0	19 /19	RAB7_RAT Ras-related protein Rab-7
	1yhn	B	RILP_HUMAN Rab interacting lysosomal protein[65 aa]	A	100.0 /99.5	13 /13	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	B	RILP_HUMAN Rab interacting lysosomal protein[65 aa]	A	100.0 /99.5	17 /17	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	B	RILP_HUMAN Rab interacting lysosomal protein[65 aa]	A	100.0 /99.5	17 /17	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	B	RILP_HUMAN Rab interacting lysosomal protein[65 aa]	A	100.0 /99.5	13 /13	RAB7_HUMAN Ras-related protein Rab-7
	6wcw	B	RUBIC_HUMAN Run domain Beclin-1-interacting and cysteine-rich ..	A	100.0 /99.4	18 /18	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	C	PDZD8_HUMAN PDZ domain-containing protein 8[106 aa]	A	100.0 /99.4	26 /26	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	C	PDZD8_HUMAN PDZ domain-containing protein 8[106 aa]	B	100.0 /99.4	19 /19	RAB7A_HUMAN Ras-related protein Rab-7a
	6iyb	B	OSBL1_HUMAN Oxysterol-binding protein-related protein 1[135 aa..	A	100.0 /99.4	12 /12	RAB7A_HUMAN Ras-related protein Rab-7a
	6iyb	D	OSBL1_HUMAN Oxysterol-binding protein-related protein 1[135 aa..	C	100.0 /99.4	11 /11	RAB7A_HUMAN Ras-related protein Rab-7a
	5z2m	A	OSBL1_MOUSE Oxysterol-binding protein-related protein 1[137 aa..	B	88.9 /99.4	9 /9	RAB7A_MOUSE Ras-related protein Rab-7a
	5z2m	D	OSBL1_MOUSE Oxysterol-binding protein-related protein 1[136 aa..	C	100.0 /99.4	7 /7	RAB7A_MOUSE Ras-related protein Rab-7a
	5ldd	A	G0SGS3_CHATD Mon1[155 aa]	C	95.0 /85.1	20 /20	G0SGE1_CHATD Rab small monomeric GTPase-like protein
	5ldd	D	G0SGS3_CHATD Mon1[143 aa]	F	95.2 /84.2	21 /21	G0SGE1_CHATD Rab small monomeric GTPase-like protein
	5ldd	B	G0SD94_CHATD Ccz1[166 aa]	C	100.0 /85.1	6 /6	G0SGE1_CHATD Rab small monomeric GTPase-like protein
	5ldd	E	G0SD94_CHATD Ccz1[165 aa]	F	100.0 /84.2	5 /5	G0SGE1_CHATD Rab small monomeric GTPase-like protein
	7e1t	C	NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom..	A	40.0 /56.9	5 /5	RAB9A_HUMAN Ras-related protein Rab-9A
	7e1t	C	NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom..	B	72.7 /56.5	11 /11	RAB9A_HUMAN Ras-related protein Rab-9A
	7e1t	D	NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom..	A	72.7 /56.9	11 /11	RAB9A_HUMAN Ras-related protein Rab-9A
	7e1t	D	NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom..	B	50.0 /56.5	6 /6	RAB9A_HUMAN Ras-related protein Rab-9A
	4qxa	B	SGSM1_MOUSE Small G protein signaling modulator 1[147 aa]	A	72.7 /54.7	11 /11	RAB9A_MOUSE Ras-related protein Rab-9A
	3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
207	pdb_id	contact mol		homologue
	pdb_id	a³	description	a⁴	identity[%]⁵	Ncon⁶	description
	1ky2	C	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	A	90.0 /70.1	20 /20	YPT7_YEAST GTP-BINDING PROTEIN YPT7P
	1vg8	F	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	A	100.0 /100.0	22 /22	RAB7_RAT Ras-related protein Rab-7
	1vg8	H	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	B	100.0 /100.0	24 /24	RAB7_RAT Ras-related protein Rab-7
	1vg8	J	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	C	100.0 /100.0	24 /24	RAB7_RAT Ras-related protein Rab-7
	1vg8	L	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	D	100.0 /100.0	23 /23	RAB7_RAT Ras-related protein Rab-7
	1yzl	C	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	A	70.8 /55.3	24 /24	RAB9A_MOUSE Ras-related protein Rab-9A
	2ocb	C	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	A	70.8 /57.1	24 /24	RAB9B_HUMAN Ras-related protein Rab-9B
	3law	G	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	A	95.7 /99.4	23 /23	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	I	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	B	95.2 /99.4	21 /21	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	K	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	C	95.7 /99.4	23 /23	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	M	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	D	96.0 /99.4	25 /25	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	O	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	E	95.8 /99.4	24 /24	RAB7A_HUMAN Ras-related protein Rab-7a
	1t91	F	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.4	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1t91	H	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	B	100.0 /99.4	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1t91	J	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	C	100.0 /99.4	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1t91	L	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	D	100.0 /99.4	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	D	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.5	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	D	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.5	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	4qxa	C	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	69.2 /54.7	26 /26	RAB9A_MOUSE Ras-related protein Rab-9A
	5z2m	F	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	B	100.0 /99.4	23 /23	RAB7A_MOUSE Ras-related protein Rab-7a
	5z2m	G	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	C	100.0 /99.4	24 /24	RAB7A_MOUSE Ras-related protein Rab-7a
	6iyb	F	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.4	25 /25	RAB7A_HUMAN Ras-related protein Rab-7a
	6iyb	H	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	C	100.0 /99.4	22 /22	RAB7A_HUMAN Ras-related protein Rab-7a
	6wcw	C	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.4	23 /23	RAB7A_HUMAN Ras-related protein Rab-7a
	7e1t	F	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	66.7 /56.9	24 /24	RAB9A_HUMAN Ras-related protein Rab-9A
	7e1t	H	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	B	70.8 /56.5	24 /24	RAB9A_HUMAN Ras-related protein Rab-9A
	7f6j	E	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.4	24 /24	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	G	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	B	100.0 /99.4	23 /23	RAB7A_HUMAN Ras-related protein Rab-7a
	4phh	E	2UK 5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phos..	A	90.0 /69.5	20 /20	YPT7_YEAST GTP-binding protein YPT7
	4phh	H	2UK 5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phos..	B	89.5 /69.3	19 /19	YPT7_YEAST GTP-binding protein YPT7
	4phh	K	2UK 5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phos..	C	90.9 /71.2	22 /22	YPT7_YEAST GTP-binding protein YPT7
	4phh	M	2UK 5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phos..	D	90.9 /69.6	22 /22	YPT7_YEAST GTP-binding protein YPT7
	4phg	C	2UJ N-[3-(propanoylamino)propyl]guanosine 5'-(tetrahyd..	A	91.3 /68.4	23 /23	YPT7_YEAST GTP-binding protein YPT7
	4phf	B	2UH N-[3-(propanoylamino)propyl]guanosine 5'-(trihydro..	A	87.5 /67.3	16 /16	YPT7_YEAST GTP-binding protein YPT7
	1ky3	C	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	A	93.3 /67.3	15 /15	YPT7_YEAST GTP-BINDING PROTEIN YPT7P
	1s8f	D	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	A	82.4 /58.2	17 /17	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	D	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	A	82.4 /58.2	17 /17	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	K	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	B	81.2 /57.1	16 /16	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	K	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	B	81.2 /57.1	16 /16	RAB9A_CANFA Ras-related protein Rab-9A
	1vg0	F	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	B	100.0 /100.0	17 /17	RAB7_RAT Ras-related protein Rab-7
	1vg1	C	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	A	100.0 /100.0	16 /16	RAB7_RAT Ras-related protein Rab-7
	1vg9	K	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	B	100.0 /100.0	18 /18	RAB7_RAT Ras-related protein Rab-7
	1vg9	O	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	D	100.0 /100.0	16 /16	RAB7_RAT Ras-related protein Rab-7
	1vg9	S	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	F	100.0 /100.0	18 /18	RAB7_RAT Ras-related protein Rab-7
	1vg9	W	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	H	100.0 /100.0	16 /16	RAB7_RAT Ras-related protein Rab-7
	1wms	C	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	A	76.5 /57.8	17 /17	RAB9A_HUMAN Ras-related protein Rab-9A
	1wms	D	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	B	76.5 /59.1	17 /17	RAB9A_HUMAN Ras-related protein Rab-9A
	1s8f	E	BEZ BENZOIC ACID[9 atoms]	A	50.0 /58.2	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	E	BEZ BENZOIC ACID[9 atoms]	A	100.0 /58.2	4 /4	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	E	BEZ BENZOIC ACID[9 atoms]	A	100.0 /58.2	4 /4	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	E	BEZ BENZOIC ACID[9 atoms]	A	50.0 /58.2	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	F	BEZ BENZOIC ACID[9 atoms]	A	100.0 /58.2	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	F	BEZ BENZOIC ACID[9 atoms]	A	100.0 /58.2	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	G	BEZ BENZOIC ACID[9 atoms]	A	75.0 /58.2	4 /4	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	G	BEZ BENZOIC ACID[9 atoms]	A	75.0 /58.2	4 /4	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	E	BEZ BENZOIC ACID[9 atoms]	B	100.0 /57.1	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	E	BEZ BENZOIC ACID[9 atoms]	B	100.0 /57.1	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	F	BEZ BENZOIC ACID[9 atoms]	B	75.0 /57.1	4 /4	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	F	BEZ BENZOIC ACID[9 atoms]	B	75.0 /57.1	4 /4	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	G	BEZ BENZOIC ACID[9 atoms]	B	100.0 /57.1	1 /1	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	G	BEZ BENZOIC ACID[9 atoms]	B	100.0 /57.1	1 /1	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	L	BEZ BENZOIC ACID[9 atoms]	B	66.7 /57.1	9 /9	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	L	BEZ BENZOIC ACID[9 atoms]	B	66.7 /57.1	9 /9	RAB9A_CANFA Ras-related protein Rab-9A
	3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
207	pdb_id	contact mol		homologue
	pdb_id	a³	description	a⁴	identity[%]⁵	Ncon⁶	description
	1vg9	J	K POTASSIUM ION[1 atoms]	B	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1vg9	N	K POTASSIUM ION[1 atoms]	D	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1vg9	R	K POTASSIUM ION[1 atoms]	F	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1vg9	V	K POTASSIUM ION[1 atoms]	H	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1ky2	B	MG MAGNESIUM ION[1 atoms]	A	100.0 /70.1	2 /2	YPT7_YEAST GTP-BINDING PROTEIN YPT7P
	1ky3	B	MG MAGNESIUM ION[1 atoms]	A	100.0 /67.3	1 /1	YPT7_YEAST GTP-BINDING PROTEIN YPT7P
	1s8f	H	MG MAGNESIUM ION[1 atoms]	B	0.0 /57.1	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	H	MG MAGNESIUM ION[1 atoms]	B	0.0 /57.1	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1t91	E	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	2 /2	RAB7_HUMAN Ras-related protein Rab-7
	1t91	G	MG MAGNESIUM ION[1 atoms]	B	100.0 /99.4	2 /2	RAB7_HUMAN Ras-related protein Rab-7
	1t91	I	MG MAGNESIUM ION[1 atoms]	C	100.0 /99.4	2 /2	RAB7_HUMAN Ras-related protein Rab-7
	1t91	K	MG MAGNESIUM ION[1 atoms]	D	100.0 /99.4	2 /2	RAB7_HUMAN Ras-related protein Rab-7
	1vg0	E	MG MAGNESIUM ION[1 atoms]	B	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg1	B	MG MAGNESIUM ION[1 atoms]	A	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1vg8	E	MG MAGNESIUM ION[1 atoms]	A	100.0 /100.0	3 /3	RAB7_RAT Ras-related protein Rab-7
	1vg8	G	MG MAGNESIUM ION[1 atoms]	B	100.0 /100.0	3 /3	RAB7_RAT Ras-related protein Rab-7
	1vg8	I	MG MAGNESIUM ION[1 atoms]	C	100.0 /100.0	3 /3	RAB7_RAT Ras-related protein Rab-7
	1vg8	K	MG MAGNESIUM ION[1 atoms]	D	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg9	I	MG MAGNESIUM ION[1 atoms]	B	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg9	M	MG MAGNESIUM ION[1 atoms]	D	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg9	Q	MG MAGNESIUM ION[1 atoms]	F	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg9	U	MG MAGNESIUM ION[1 atoms]	H	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1yhn	C	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.5	5 /5	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	C	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.5	5 /5	RAB7_HUMAN Ras-related protein Rab-7
	1yzl	B	MG MAGNESIUM ION[1 atoms]	A	66.7 /55.3	3 /3	RAB9A_MOUSE Ras-related protein Rab-9A
	2ocb	B	MG MAGNESIUM ION[1 atoms]	A	66.7 /57.1	3 /3	RAB9B_HUMAN Ras-related protein Rab-9B
	3law	F	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	H	MG MAGNESIUM ION[1 atoms]	B	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	J	MG MAGNESIUM ION[1 atoms]	C	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	L	MG MAGNESIUM ION[1 atoms]	D	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	N	MG MAGNESIUM ION[1 atoms]	E	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	4phf	C	MG MAGNESIUM ION[1 atoms]	A	100.0 /67.3	1 /1	YPT7_YEAST GTP-binding protein YPT7
	4phg	B	MG MAGNESIUM ION[1 atoms]	A	100.0 /68.4	3 /3	YPT7_YEAST GTP-binding protein YPT7
	4phh	F	MG MAGNESIUM ION[1 atoms]	A	100.0 /69.5	3 /3	YPT7_YEAST GTP-binding protein YPT7
	4phh	I	MG MAGNESIUM ION[1 atoms]	B	100.0 /69.3	3 /3	YPT7_YEAST GTP-binding protein YPT7
	4phh	L	MG MAGNESIUM ION[1 atoms]	C	100.0 /71.2	3 /3	YPT7_YEAST GTP-binding protein YPT7
	4phh	N	MG MAGNESIUM ION[1 atoms]	D	100.0 /69.6	3 /3	YPT7_YEAST GTP-binding protein YPT7
	4qxa	D	MG MAGNESIUM ION[1 atoms]	A	66.7 /54.7	3 /3	RAB9A_MOUSE Ras-related protein Rab-9A
	5z2m	E	MG MAGNESIUM ION[1 atoms]	B	100.0 /99.4	3 /3	RAB7A_MOUSE Ras-related protein Rab-7a
	6iyb	E	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	2 /2	RAB7A_HUMAN Ras-related protein Rab-7a
	6iyb	G	MG MAGNESIUM ION[1 atoms]	C	100.0 /99.4	3 /3	RAB7A_HUMAN Ras-related protein Rab-7a
	6wcw	D	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	5 /5	RAB7A_HUMAN Ras-related protein Rab-7a
	7e1t	E	MG MAGNESIUM ION[1 atoms]	A	66.7 /56.9	3 /3	RAB9A_HUMAN Ras-related protein Rab-9A
	7e1t	G	MG MAGNESIUM ION[1 atoms]	B	66.7 /56.5	3 /3	RAB9A_HUMAN Ras-related protein Rab-9A
	7f6j	D	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	3 /3	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	F	MG MAGNESIUM ION[1 atoms]	B	100.0 /99.4	2 /2	RAB7A_HUMAN Ras-related protein Rab-7a
	1s8f	J	CL CHLORIDE ION[1 atoms]	B	0.0 /57.1	4 /4	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	J	CL CHLORIDE ION[1 atoms]	B	0.0 /57.1	4 /4	RAB9A_CANFA Ras-related protein Rab-9A
	4phh	G	CL CHLORIDE ION[1 atoms]	A	0.0 /69.5	1 /1	YPT7_YEAST GTP-binding protein YPT7
	4phh	J	CL CHLORIDE ION[1 atoms]	B	80.0 /69.3	5 /5	YPT7_YEAST GTP-binding protein YPT7
	4phh	O	CL CHLORIDE ION[1 atoms]	D	75.0 /69.6	4 /4	YPT7_YEAST GTP-binding protein YPT7
	4phg	D	YT3 YTTRIUM (III) ION[1 atoms]	A	0.0 /68.4	1 /1	YPT7_YEAST GTP-binding protein YPT7
	4phg	E	YT3 YTTRIUM (III) ION[1 atoms]	A	100.0 /68.4	2 /2	YPT7_YEAST GTP-binding protein YPT7
	4phg	F	YT3 YTTRIUM (III) ION[1 atoms]	A	100.0 /68.4	1 /1	YPT7_YEAST GTP-binding protein YPT7
	1s8f	C	SR STRONTIUM ION[1 atoms]	A	0.0 /58.2	1 /1	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	C	SR STRONTIUM ION[1 atoms]	A	0.0 /58.2	1 /1	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	I	SR STRONTIUM ION[1 atoms]	B	66.7 /57.1	3 /3	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	I	SR STRONTIUM ION[1 atoms]	B	66.7 /57.1	3 /3	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	I	SR STRONTIUM ION[1 atoms]	B	66.7 /57.1	3 /3	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	I	SR STRONTIUM ION[1 atoms]	B	66.7 /57.1	3 /3	RAB9A_CANFA Ras-related protein Rab-9A
	2ocb	D	UNX UNKNOWN ATOM OR ION[1 atoms]	A	0.0 /57.1	1 /1	RAB9B_HUMAN Ras-related protein Rab-9B
	2ocb	E	UNX UNKNOWN ATOM OR ION[1 atoms]	A	25.0 /57.1	4 /4	RAB9B_HUMAN Ras-related protein Rab-9B
	2ocb	F	UNX UNKNOWN ATOM OR ION[1 atoms]	A	33.3 /57.1	3 /3	RAB9B_HUMAN Ras-related protein Rab-9B
	2ocb	G	UNX UNKNOWN ATOM OR ION[1 atoms]	A	50.0 /57.1	4 /4	RAB9B_HUMAN Ras-related protein Rab-9B
	2ocb	H	UNX UNKNOWN ATOM OR ION[1 atoms]	A	100.0 /57.1	2 /2	RAB9B_HUMAN Ras-related protein Rab-9B
	2ocb	I	UNX UNKNOWN ATOM OR ION[1 atoms]	A	100.0 /57.1	2 /2	RAB9B_HUMAN Ras-related protein Rab-9B
	2ocb	J	UNX UNKNOWN ATOM OR ION[1 atoms]	A	0.0 /57.1	2 /2	RAB9B_HUMAN Ras-related protein Rab-9B
	3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
207	pdb_id	contact mol		homologue
	pdb_id	a³	description	a⁴	identity[%]⁵	Ncon⁶	description
	1s8f	A	RAB9A_CANFA Ras-related protein Rab-9A[168 aa]	A	50.0 /58.2	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	A	RAB9A_CANFA Ras-related protein Rab-9A[168 aa]	A	50.0 /58.2	2 /2	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	B	RAB9A_CANFA Ras-related protein Rab-9A[173 aa]	A	66.7 /58.2	18 /18	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	B	RAB9A_CANFA Ras-related protein Rab-9A[173 aa]	A	50.0 /58.2	6 /6	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	B	RAB9A_CANFA Ras-related protein Rab-9A[173 aa]	A	50.0 /58.2	6 /6	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	B	RAB9A_CANFA Ras-related protein Rab-9A[173 aa]	A	66.7 /58.2	18 /18	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	A	RAB9A_CANFA Ras-related protein Rab-9A[168 aa]	B	57.9 /57.1	19 /19	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	A	RAB9A_CANFA Ras-related protein Rab-9A[168 aa]	B	28.6 /57.1	7 /7	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	A	RAB9A_CANFA Ras-related protein Rab-9A[168 aa]	B	28.6 /57.1	7 /7	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	A	RAB9A_CANFA Ras-related protein Rab-9A[168 aa]	B	57.9 /57.1	19 /19	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	B	RAB9A_CANFA Ras-related protein Rab-9A[173 aa]	B	60.0 /57.1	5 /5	RAB9A_CANFA Ras-related protein Rab-9A
	1s8f	B	RAB9A_CANFA Ras-related protein Rab-9A[173 aa]	B	60.0 /57.1	5 /5	RAB9A_CANFA Ras-related protein Rab-9A
	3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
207	pdb_id	contact mol		homologue
	pdb_id	a³	description	a⁴	identity[%]⁵	Ncon⁶	description
	1vg0	G	PG4 TETRAETHYLENE GLYCOL[13 atoms]	B	100.0 /100.0	4 /4	RAB7_RAT Ras-related protein Rab-7
	1vg9	L	P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms]	B	100.0 /100.0	5 /5	RAB7_RAT Ras-related protein Rab-7
	1vg9	P	P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms]	D	100.0 /100.0	5 /5	RAB7_RAT Ras-related protein Rab-7
	1vg9	T	P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms]	F	100.0 /100.0	5 /5	RAB7_RAT Ras-related protein Rab-7
	1vg9	X	P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms]	H	100.0 /100.0	5 /5	RAB7_RAT Ras-related protein Rab-7
	5ldd	G	SO4 SULFATE ION[5 atoms]	C	100.0 /85.1	8 /8	G0SGE1_CHATD Rab small monomeric GTPase-like protein
	5ldd	H	SO4 SULFATE ION[5 atoms]	C	80.0 /85.1	5 /5	G0SGE1_CHATD Rab small monomeric GTPase-like protein
	5ldd	I	SO4 SULFATE ION[5 atoms]	F	100.0 /84.2	8 /8	G0SGE1_CHATD Rab small monomeric GTPase-like protein
	4phf	D	NO3 NITRATE ION[4 atoms]	A	66.7 /67.3	6 /6	YPT7_YEAST GTP-binding protein YPT7
	3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

Contact Molecules for Homologous Proteins

Full Bars[50 %]

UniProt Feature Tables [P51149(RAB7A_HUMAN)]