Protein Model on 1vg8_A_1 (TEMPLATE: 1vg8 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [184 aa] Ras-related protein Rab-7 :RAB7_RAT
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:1vg8_A_1 identity=100.0%
queryA         7:VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
                :****************************************************************************************************:
1vg8_A_1       7:VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEF: 106
SecStr          : EEEEEEE  TTSSHHHHHHHHHHS   SS     SEEEEEEEEESSS EEEEEEEEE SSGGGS S  GGGTT SEEEEEEETT HHHHHTHHHHHHHH:    
ExpBur          :eebbbbbbbeeebbbeebbebbbeeeeeeeeeeeebeeeeeeebebeeeebebbbbbbbbeeeeeeeeeebbeebbbbbbbbbbbeeebbeebeebbeeb:    

queryA       107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPI: 190
                :************************************************************************************:
1vg8_A_1     107:LIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPI: 190
SecStr          :HHHH  SSGGGS EEEEEE TTSS   S HHHHHHHHHHTTS  EEE BTTTTBSHHHHHHHHHHHHHHHHHHHHHHHHS    :    
ExpBur          :beebebeeeeebbbbbbbbeeeeeeeebeeeebeebbeebeebebbbbbbeeeeebeebbebbbeebbebbeeeeeeeeeeeee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123