Protein Model on 7e1t_A_1_C_1 (TEMPLATE: 7e1t )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(RAB7A_HUMAN) A 1 (A) polymer(polypeptide(L)) [170 aa] Ras-related protein Rab-9A :RAB9A_HUMAN
2 b C 1 (C) polymer(polypeptide(L)) [33 aa] Isoform 2 of Nuclear distribution protein nudE homolog 1 :NDE1_HUMAN 38K(F) 39A(H) 41I 44D(E) 69R (identity: 40.0 %/56.9 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7e1t_A_1 identity=56.9%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *** *** **** **** **  **  *   ***  ** *   **   ********** *** **   **** *** * * *     *  *  *  ** :
7e1t_A_1       9:LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFI: 108
SecStr          :EEEEEEE STTSSHHHHHHHHHH    SS     SEEEEEEEEEETTEEEEEEEEEE  SGGGHHHHGGG TT SEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbbbbbbeebbbbbbbebbeeeeeeeeeeebebbeeeeeebebeeeebebbbbbbbbeeebeeebbeebeebebbbbbbbbeeeebbebbeebeebbe:    
Contact         :                              bb b  b                        b                                      

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL: 174
                :  *    ** **** ******   *** *  *****      ******** * **  **    *  *:
7e1t_A_1     109:YYADVKEPESFPFVILGNKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL: 175
SecStr          :HHH  SSGGG  EEEEEE TT SS SS HHHHHHHHHTTT   EEE BTTTTBSHHHHHHHHHHHHH:    
ExpBur          :eebeeeeeeebbbbbbbbeeeeeeeebeeeebeebbeeeeebbbbbbbbeeeeebeebbebbbeebe:    


Input Residue Numbers for Focused Sites

ex) 2,15,123