Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
5541 | 601 | 168 | YP_009725308.1() | |
QUERYSEQ |
AVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYG IATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFEKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYP SARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLRAKHYVYIGDPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCRRCPAEIVD TVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLTRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRRNVATL Q |
601 |
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region | name | description |
![]() ![]() ![]() |
1-601 | DISORDER | predicted by DISOPRED |
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601 | |||||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
pdb_id | a1 | identity[%]2 | description | |||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H | 100.0 | R1AB_SARS2 Helicase | |||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
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601 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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A | R1AB_SARS2 RNA-directed RNA polymerase[926 aa] | E | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() |
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A | R1AB_SARS2 RNA-directed RNA polymerase[926 aa] | H | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() |
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A | R1AB_SARS2 RNA-directed RNA polymerase[926 aa] | E | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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J | R1AB_SARS2 RNA-directed RNA polymerase[927 aa] | F | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() |
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C | R1AB_SARS2 Non-structural protein 7[73 aa] | E | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() |
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C | R1AB_SARS2 Non-structural protein 7[72 aa] | E | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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D | R1AB_SARS2 Non-structural protein 8[186 aa] | E | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | R1AB_SARS2 Non-structural protein 8[187 aa] | H | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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D | R1AB_SARS2 Non-structural protein 8[186 aa] | I | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() |
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B | R1AB_SARS2 Non-structural protein 8[187 aa] | G | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | R1AB_SARS2 Non-structural protein 8[187 aa] | E | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() |
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D | R1AB_SARS2 Non-structural protein 8[185 aa] | E | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() |
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B | R1AB_SARS2 Non-structural protein 8[186 aa] | E | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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P | R1AB_SARS2 Proofreading exoribonuclease[524 aa] | E | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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601 | pdb_id | contact mol | homologue | ||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
a3 | description | a4 | identity[%]5 | Ncon6 | description | |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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G | RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') | I | 100.0 /100.0 |
20 /20 |
R1AB_SARS2 Helicase |
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T | Template RNA | E | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Helicase |
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G | RNA (43-MER) | E | 100.0 /100.0 |
32 /32 |
R1AB_SARS2 Helicase |
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H | Template RNA | E | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H | Template RNA | E | 100.0 /100.0 |
30 /30 |
R1AB_SARS2 Helicase |
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F | Template | G | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Helicase |
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J | template | E | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
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J | template | F | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Helicase nsp13 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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601 | pdb_id | contact mol | homologue | ||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
a3 | description | a4 | identity[%]5 | Ncon6 | description | |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H |
LJA
|
B | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Helicase |
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C |
VVD
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
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I |
VVD
|
B | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Helicase |
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C |
VVG
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Helicase |
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D |
VVG
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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H |
UR7
|
B | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Helicase |
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C |
VVJ
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Helicase |
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H |
VVM
|
B | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Helicase |
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H |
VVY
|
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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H |
VVP
|
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
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C |
NY7
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Helicase |
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C |
VW1
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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H |
K2P
|
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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C |
JFM
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Helicase |
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I |
JFM
|
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
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H |
VW4
|
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H |
NYV
|
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
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H |
H04
|
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
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H |
VW7
|
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Helicase |
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C |
NZG
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
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H |
UQS
|
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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H |
VWA
|
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
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C |
UVA
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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H |
VWD
|
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C |
VWG
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H |
UVJ
|
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
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C |
JG4
|
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Helicase |
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I |
JG4
|
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C |
VWJ
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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D |
VWJ
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
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J |
VWJ
|
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C |
S9S
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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I |
S9S
|
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C |
K34
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Helicase |
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I |
K34
|
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
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J |
K34
|
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
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C |
VWM
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
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H |
S7G
|
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H |
RY4
|
B | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Helicase |
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H |
UXG
|
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
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I |
UXG
|
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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C |
S7J
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
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H |
PK4
|
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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H |
NUA
|
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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H |
HR5
|
B | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Helicase |
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H |
N0E
|
B | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Helicase |
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C |
GQJ
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H |
EJQ
|
B | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Helicase |
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H |
JHJ
|
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
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C |
VWV
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Helicase |
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H |
6SU
|
B | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Helicase |
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C |
VWY
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Helicase |
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C |
RYM
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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C |
NX7
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
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H |
MUK
|
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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C |
VX4
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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C |
STV
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
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C |
JOV
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Helicase |
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H |
O2A
|
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Helicase |
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H |
VXD
|
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Helicase |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H |
VXG
|
B | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Helicase |
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R |
ADP
|
E | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Helicase |
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U |
1N7
|
E | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Helicase |
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E |
ANP
|
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 SARS-CoV-2 helicase NSP13 |
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C |
UJK
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 SARS-CoV-2 helicase NSP13 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
![]() |
|||||||
601 | pdb_id | contact mol | homologue | ||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
a3 | description | a4 | identity[%]5 | Ncon6 | description | |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
C |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
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D |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
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E |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
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C |
ZN
|
A | 100.0 /99.8 |
4 /4 |
R1AB_CVHSA Helicase |
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E |
ZN
|
A | 100.0 /99.8 |
4 /4 |
R1AB_CVHSA Helicase |
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O |
ZN
|
E | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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P |
ZN
|
E | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
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Q |
ZN
|
E | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
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T |
MG
|
E | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Helicase |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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601 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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F | R1AB_SARS2 Helicase[596 aa] | E | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Helicase |
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E | R1AB_SARS2 Helicase[596 aa] | F | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Helicase |
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H | R1AB_SARS2 Helicase[596 aa] | I | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Helicase |
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B | R1AB_SARS2 SARS-CoV-2 helicase NSP13[585 aa] | A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 SARS-CoV-2 helicase NSP13 |
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E | R1AB_SARS2 Helicase[590 aa] | F | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
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F | R1AB_SARS2 Helicase[590 aa] | E | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Helicase |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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601 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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F |
PO4
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Helicase |
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S |
AF3
|
E | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Helicase |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |