Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
13602 | 1945 | 500 | YP_009725299.1() | |
QUERYSEQ |
APTKVTFGDDTVIEVQGYKSVNITFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAA LQPEEEQEEDWLDDDSQQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVV GPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITESKPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSA TLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVIPTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDY GARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTI KVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYC NKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPITDVFY KENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKP VETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNY MPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDL TAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDE VARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEA ELAKNVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGG |
1945 | region | name | description |
1-1945 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
1945 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
6wuu | B | 99.4 | R1AB_SARS2 Non-structural protein 3 | ||||
8f2e | A | 100.0 | R1AB_SARS2 Papain-like protease nsp3 | ||||
8hbl | A | 99.2 | R1A_SARS2 Non-structural protein 3 | ||||
6z72 | A | 100.0 | R1AB_SARS2 Replicase polyprotein 1ab | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
1945 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
5tl6[5] | D | ISG15_HUMAN Ubiquitin-like protein ISG15[78 aa] | A | 100.0 /82.9 |
21 /21 |
R1AB_CVHSA Replicase polyprotein 1ab | |
8cx9[8] | G | RL40_HUMAN Ubiquitin variant UbV.CV2.1[75 aa] | A | 100.0 /100.0 |
12 /12 |
R1A_SARS2 Papain-like protease nsp3 | |
8iho[2] | C | covalent inhibitor[4 aa] | A | 100.0 /100.0 |
18 /18 |
R1A_SARS2 Papain-like protease nsp3 | |
8iho[1] | D | covalent inhibitor[4 aa] | A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
7rbs[5] | B | ISG15_HUMAN Ubiquitin-like protein ISG15[157 aa] | A | 96.7 /99.7 |
30 /30 |
R1A_SARS2 Papain-like protease | |
6yva[1] | B | ISG15_MOUSE Ubiquitin-like protein ISG15[155 aa] | A | 96.6 /99.6 |
29 /29 |
R1A_SARS2 Replicase polyprotein 1a | |
4m0w[7] | B | RS27A_BOVIN Ubiquitin[76 aa] | A | 88.5 /82.3 |
26 /26 |
R1A_CVHSA Replicase polyprotein 1a | |
5e6j[2] | C | UBB_HUMAN Polyubiquitin-B[75 aa] | A | 63.6 /82.0 |
11 /11 |
R1AB_CVHSA Replicase polyprotein 1ab | |
7uv5[1] | C | UBB_HUMAN Ubiquitin[41 aa] | A | 100.0 /99.4 |
10 /10 |
R1A_SARS2 Papain-like protease nsp3 | |
6wuu[8] | E | VIR250[5 aa] | A | 100.0 /99.7 |
18 /18 |
R1AB_SARS2 Non-structural protein 3 | |
5tl7[2] | A | ISG15_MOUSE Ubiquitin-like protein ISG15[77 aa] | B | 92.6 /82.9 |
27 /27 |
R1AB_CVHSA Replicase polyprotein 1ab | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
1945 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
5rv9[1] | D |
EKZ
4-tert-butylbenzene-1,2-diol[12 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5rvj[1] | B |
4JQ
6-amino-2H-chromen-2-one[12 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5rvk[1] | B |
2AK
7-bromo-5-methyl-1H-indole-2,3-dione[13 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5rvl[1] | B |
BVF
4-METHYLPYRIDIN-2-AMINE[8 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5rvm[1] | B |
HBD
4-HYDROXYBENZAMIDE[10 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5rvn[1] | B |
ANN
4-METHOXYBENZOIC ACID[11 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5rvo[1] | B |
AQO
2-AMINOQUINAZOLIN-4(3H)-ONE[12 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5rvp[1] | B |
1SQ
ISOQUINOLIN-1-AMINE[11 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5rvq[1] | B |
4BY
5-methyl-1H-indole-2-carboxylic acid[13 atoms] |
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Non-structural protein 3 | |
5rvr[1] | B |
LZ1
1H-indazole[9 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
5rvs[1] | B |
0LO
5-phenylpyridine-3-carboxylic acid[15 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Non-structural protein 3 | |
5rvt[1] | B |
4BL
6-methyl-1H-indole-2-carboxylic acid[13 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5rvu[1] | B |
6P3
6-phenylpyridine-3-carboxylic acid[15 atoms] |
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Non-structural protein 3 | |
5rvv[1] | B |
WB1
6-methyl-1H-indole-3-carboxylic acid[13 atoms] |
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Non-structural protein 3 | |
5s2d[1] | C |
U0P
N'-cyclopropyl-N-methyl-N-[(5-methyl-1,2-oxazol-3-.. |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5s2h[1] | C |
VWV
ethyl (1,1-dioxo-1lambda~6~,4-thiazinan-4-yl)aceta.. |
B | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Non-structural protein 3 | |
5s2i[1] | C |
LUY
~{N}-(2-phenylethyl)-1~{H}-benzimidazol-2-amine[18.. |
B | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Non-structural protein 3 | |
5s2j[1] | C |
JGG
N-[(4-cyanophenyl)methyl]morpholine-4-carboxamide[.. |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5s2l[1] | D |
VZS
N-(2-methoxy-5-methylphenyl)-N'-4H-1,2,4-triazol-4.. |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5s2u[1] | C |
VXD
N-(3-chloro-2-methylphenyl)glycinamide[13 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
5s2v[1] | C |
W0G
(3R)-1-(2-fluorophenyl)-3-(methylamino)pyrrolidin-.. |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
5s2x[1] | C |
W0J
(3R)-N-methyl-1-(pyridazin-3-yl)piperidin-3-amine[.. |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5s2y[1] | C |
W0M
(2R)-2-(4-chlorophenoxy)propanamide[13 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5s31[1] | C |
W0S
1-(3,4,5-trimethoxyphenyl)methanamine[14 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5s36[1] | D |
7ZC
1-(5-methoxy-1H-indol-3-yl)-N,N-dimethyl-methanami.. |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5s3i[1] | C |
W1P
5-methyl-2-phenyl-2,4-dihydro-3H-pyrazol-3-one[13 .. |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5s3q[1] | D |
W2A
(2R,3R)-2-methyl-1-(methylsulfonyl)piperidine-3-ca.. |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
5s3q[1] | E |
W2A
(2R,3R)-2-methyl-1-(methylsulfonyl)piperidine-3-ca.. |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Non-structural protein 3 | |
5s3r[1] | C |
W24
(2S,3S)-N,2-dimethyl-1-(methylsulfonyl)piperidine-.. |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5s3t[1] | E |
W2G
(1R,2S)-2-(thiophen-3-yl)cyclopentane-1-carboxylic.. |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5s3v[1] | C |
W2M
(2R)-1',4'-dihydro-2'H-spiro[pyrrolidine-2,3'-quin.. |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5s3w[1] | C |
W2S
(3R,4R)-4-(2-methylphenyl)oxolane-3-carboxylic aci.. |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
5s3y[1] | C |
W2Y
(2S,3S)-2-methyl-1-(methylsulfonyl)piperidine-3-ca.. |
B | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Non-structural protein 3 | |
5s43[1] | C |
UUJ
5-bromo-2-hydroxybenzonitrile[10 atoms] |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
5s4k[1] | C |
W44
(2S,5R,6R)-7-methyl-2,3,4,5,6,7-hexahydro-1H-2,6-m.. |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
6w6y[1] | C |
AMP
ADENOSINE MONOPHOSPHATE[23 atoms] |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Non-structural protein 3 | |
6woj[15] | E |
APR
ADENOSINE-5-DIPHOSPHORIBOSE[36 atoms] |
A | 100.0 /100.0 |
21 /21 |
R1AB_SARS2 Non-structural protein 3 | |
6z6i[5] | E |
A1R
5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLID.. |
A | 100.0 /100.0 |
22 /22 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z6i[1] | X |
A1R
5'-O-[(S)-{[(S)-{[(2R,3R,4S)-3,4-DIHYDROXYPYRROLID.. |
C | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z6i[1] | O |
MPO
3[N-MORPHOLINO]PROPANE SULFONIC ACID[13 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Replicase polyprotein 1ab | |
8azc[1] | C |
MPO
3[N-MORPHOLINO]PROPANE SULFONIC ACID[13 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
6z72[4] | E |
A3R
Adenosine Diphosphate (Hydroxymethyl)pyrrolidine m.. |
A | 100.0 /100.0 |
23 /23 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z72[1] | R |
MLT
D-MALATE[9 atoms] |
D | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Replicase polyprotein 1ab | |
7bf3[2] | I |
ADN
ADENOSINE[19 atoms] |
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 NSP3 macrodomain | |
7bf4[1] | B |
5GP
GUANOSINE-5'-MONOPHOSPHATE[24 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 NSP3 macrodomain | |
7bf5[4] | G |
A2R
[(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY.. |
A | 100.0 /100.0 |
23 /23 |
R1AB_SARS2 NSP3 macrodomain | |
7bf6[4] | D |
U08
(2~{R},3~{R},4~{S},5~{R})-2-(4-azanylpyrrolo[2,1-f.. |
A | 100.0 /100.0 |
13 /13 |
R1AB_SARS2 Papain-like protease nsp3 | |
7gzw[1] | B |
A1AK4
(3M)-3-(4-{[(1S)-1-(1,1-dioxo-1,2,3,4-tetrahydro-1.. |
A | 100.0 /100.0 |
18 /18 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h01[1] | B |
A1ALR
7-[(1S)-2-methyl-1-{[(6M)-6-(1-methyl-1H-pyrazol-4.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h09[2] | C |
A1AL6
(4M)-1-methyl-4-(4-{[(1R)-2-methyl-1-(3-oxo-3,4-di.. |
A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0a[4] | C |
A1AL7
2-[(4P)-4-(4-{[(1S)-1-(2,3-dihydro-1,4-benzodioxin.. |
A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0b[1] | C |
A1AMD
(4M)-4-(4-{[(1R)-1-(2,3-dihydro[1,4]dioxino[2,3-b].. |
A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0c[1] | C |
A1AME
4-{[(1R)-1-(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0d[1] | B |
A1AIP
7-[(1S)-1-{[(6P)-6-(1,3-dimethyl-1H-pyrazol-4-yl)-.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0e[2] | C |
A1AMF
4-{[(1R)-1-(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6.. |
A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0f[1] | C |
A1AMG
N-cyclopropyl-4-{[(1R)-1-(1,1-dioxo-1,2,3,4-tetrah.. |
A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0g[2] | C |
A1AMI
(4S)-6-{(1S)-1-[(6,7-dihydro-5H-pyrrolo[2,3-d]pyri.. |
A | 100.0 /100.0 |
13 /13 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0h[2] | C |
A1AMJ
N-ethyl-4-{[(1S)-2-methyl-1-(3-methyl-4-oxo-3,4-di.. |
A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0i[1] | B |
A1AMK
4-{[(1R)-1-(4,4-dioxo-3,4-dihydro-2H-1,4lambda~6~-.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0j[2] | C |
A1AML
6-{(1S)-2-methyl-1-[(7H-pyrrolo[2,3-d]pyrimidin-4-.. |
A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0k[1] | B |
A1AMP
4-{[(1S)-1-(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0l[1] | C |
A1AMQ
4-{[(S)-cyclopropyl(1,1-dioxo-1,2,3,4-tetrahydro-1.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0m[2] | C |
A1AMR
2-[(4P)-4-(4-{[(1S)-1-(1,1-dioxo-1,2,3,4-tetrahydr.. |
A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0n[2] | C |
A1AMS
7-[(1R)-1-({(6M)-6-[(4R)-imidazo[1,5-a]pyridin-6-y.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0q[1] | C |
A1AMV
4-{[(1S)-1-(2-aminopyridin-4-yl)-2-methylpropyl]am.. |
A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0r[1] | B |
A1AMW
7-[(1R)-2-methyl-1-{[(6M)-6-(1-methyl-2-oxo-1,2-di.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0s[2] | C |
A1ANI
4-{[(1S)-1-(2-acetamido-1,3-benzothiazol-6-yl)-2-m.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0w[1] | B |
A1ANP
7-{(1R)-2-methyl-1-[(7H-pyrrolo[2,3-d]pyrimidin-4-.. |
A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0x[2] | C |
A1ANQ
(4M)-1-methyl-4-(4-{[(1S)-2-methyl-1-(3-oxo-3,4-di.. |
A | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0y[1] | C |
A1ANR
4-{[(1S)-1-(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0z[1] | B |
A1ANS
4-{[(1R)-1-(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h10[1] | B |
A1ANV
7-[(1R)-1-{[6-(methanesulfonyl)-7H-pyrrolo[2,3-d]p.. |
A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h11[1] | B |
A1ANW
7-[(1R)-1-{[(6M)-6-(2,5-dihydrofuran-3-yl)-7H-pyrr.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h12[1] | B |
A1ANX
7-[(1R)-2-methyl-1-{[(6M)-6-(1H-pyrazol-4-yl)-7H-p.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h13[1] | B |
A1ANU
7-[(1R)-1-{[(6M)-6-(3,3-dimethyl-2-oxo-2,3-dihydro.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h14[1] | B |
A1ANY
7-[(1R)-2-methyl-1-{[(6M)-6-(1-methyl-6-oxo-1,6-di.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h15[1] | B |
A1ANZ
7-[(1R)-1-{[(6M)-6-{2-[2-(dimethylamino)ethoxy]pyr.. |
A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h16[1] | B |
A1AN0
7-{(1R)-1-[(6-bromo-7H-pyrrolo[2,3-d]pyrimidin-4-y.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h17[1] | B |
A1AN2
7-[(1R)-1-{[6-(2-aminopyrimidin-5-yl)-7H-pyrrolo[2.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h18[1] | B |
A1AN3
7-[(1R)-1-({6-[2-(3-hydroxyazetidin-1-yl)pyrimidin.. |
A | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h19[2] | C |
A1AN4
4-{[(1S)-1-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-me.. |
A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h1c[1] | B |
A1AOA
7-[(1S)-1-{[(5R,8S)-10-acetyl-6,7,8,9-tetrahydro-5.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h1d[1] | B |
A1AOB
4-{[(1R)-1-(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6.. |
A | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Papain-like protease nsp3 | |
7jiv[2] | B |
VBY
5-(acryloylamino)-2-methyl-N-[(1R)-1-(naphthalen-1.. |
A | 100.0 /99.7 |
11 /11 |
R1A_SARS2 Papain-like protease | |
7kok[2] | B |
Y96
5-[(E)-(hydroxyimino)methyl]-2-methyl-N-[(1R)-1-(n.. |
A | 100.0 /99.7 |
10 /10 |
R1A_SARS2 Papain-like protease | |
7lbr[2] | F |
XT7
5-[(azetidin-3-yl)amino]-N-[(1R)-1-{3-[5-({[(1S,3R.. |
A | 100.0 /100.0 |
11 /11 |
R1A_SARS2 Non-structural protein 3 | |
7lbs[2] | C |
XR8
5-[(azetidin-3-yl)amino]-2-methyl-N-[(1R)-1-(3-{5-.. |
A | 100.0 /100.0 |
12 /12 |
R1A_SARS2 Non-structural protein 3 | |
7llf[2] | I |
Y54
5-[(azetidin-3-yl)amino]-N-[(1R)-1-{3-[5-({[(1R,3S.. |
A | 100.0 /100.0 |
11 /11 |
R1A_SARS2 Non-structural protein 3 | |
7llz[2] | C |
Y61
N-[(1R)-1-(3-{5-[(acetylamino)methyl]thiophen-2-yl.. |
A | 100.0 /100.0 |
11 /11 |
R1A_SARS2 Non-structural protein 3 | |
7los[2] | E |
Y97
5-(azetidin-3-ylamino)-2-methyl-~{N}-[(1~{R})-1-[3.. |
A | 100.0 /100.0 |
11 /11 |
R1A_SARS2 Non-structural protein 3 | |
7nt4[4] | C |
PRL
PROFLAVIN[16 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
7nt4[2] | E |
PRL
PROFLAVIN[16 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
7ofs[1] | E |
YRL
4-(2-hydroxyethyl)phenol[10 atoms] |
A | 100.0 /100.0 |
10 /10 |
R1A_SARS2 Papain-like protease nsp3 | |
7oft[1] | K |
HBA
P-HYDROXYBENZALDEHYDE[9 atoms] |
A | 100.0 /100.0 |
9 /9 |
R1A_SARS2 Papain-like protease nsp3 | |
7ofu[1] | B |
HE9
methyl 3,4-bis(oxidanyl)benzoate[12 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
7qcg[1] | B |
DZI
3,4,5-tris(oxidanyl)-N-[(E)-1H-pyrrol-2-ylmethylid.. |
A | 100.0 /100.0 |
7 /7 |
R1A_SARS2 Papain-like protease nsp3 | |
7qch[1] | B |
A5I
N-(3,5-dimetoxy-4-hydroxybenzyliden)thiosemicarbaz.. |
A | 100.0 /100.0 |
10 /10 |
R1A_SARS2 Papain-like protease nsp3 | |
7qci[1] | B |
A6Q
N-(3,4-dihydroxybenzylidene)-thiosemicarbazone[16 .. |
A | 100.0 /100.0 |
10 /10 |
R1A_SARS2 Papain-like protease nsp3 | |
7qcj[1] | F |
A4O
N-(2,4-dihydroxybenzylidene)-thiosemicarbazone[14 .. |
A | 100.0 /100.0 |
10 /10 |
R1A_SARS2 Papain-like protease nsp3 | |
7qck[1] | B |
A7L
N-(2,5-dihydroxybenzylidene)-thiosemicarbazone[16 .. |
A | 100.0 /100.0 |
9 /9 |
R1A_SARS2 Papain-like protease nsp3 | |
7sdr[3] | D |
JW9
4-({methyl[(1R)-1-(naphthalen-1-yl)ethyl]amino}met.. |
A | 100.0 /100.0 |
12 /12 |
R1A_SARS2 Non-structural protein 3 | |
7sgv[2] | B |
L30
N-(naphthalen-1-yl)pyridine-3-carboxamide[19 atoms.. |
A | 100.0 /99.7 |
9 /9 |
R1A_SARS2 Papain-like protease | |
8azi[2] | C |
OHR
2'-deoxyadenosine 5'-diphosphoribose [35 atoms] |
A | 100.0 /100.0 |
22 /22 |
R1A_SARS2 Papain-like protease nsp3 | |
8azl[2] | C |
OI3
2'-deoxyadenosine 5'-fluoro-diphosphoribose [36 at.. |
A | 100.0 /100.0 |
23 /23 |
R1A_SARS2 Papain-like protease nsp3 | |
8azm[2] | C |
OI6
8-bromoadenosine 5'-diphosphoribose [37 atoms] |
A | 100.0 /100.0 |
22 /22 |
R1A_SARS2 Papain-like protease nsp3 | |
8azo[2] | C |
OIG
beta-ethyl-adenosine diphosphate[29 atoms] |
A | 100.0 /100.0 |
14 /14 |
R1A_SARS2 Papain-like protease nsp3 | |
8azp[2] | C |
OH9
beta-methyl-adenosine diphosphate[28 atoms] |
A | 100.0 /100.0 |
17 /17 |
R1A_SARS2 Papain-like protease nsp3 | |
8eua[1] | B |
WUK
methyl 4-{2-[3-(2-{[(1R)-1-(naphthalen-1-yl)ethyl].. |
A | 100.0 /100.0 |
18 /18 |
R1AB_SARS2 Papain-like protease nsp3 | |
8g62[3] | E |
YOO
3-methoxy-5-(1-methylpiperidin-4-yl)-N-[4-(pyrroli.. |
A | 100.0 /100.0 |
10 /10 |
R1A_SARS2 Non-structural protein 3 | |
8g62[1] | F |
YOO
3-methoxy-5-(1-methylpiperidin-4-yl)-N-[4-(pyrroli.. |
A | 100.0 /100.0 |
10 /10 |
R1A_SARS2 Non-structural protein 3 | |
8g62[2] | M |
YOO
3-methoxy-5-(1-methylpiperidin-4-yl)-N-[4-(pyrroli.. |
A | 100.0 /100.0 |
4 /4 |
R1A_SARS2 Non-structural protein 3 | |
8gia[1] | C |
ZJ3
[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihyd.. |
A | 100.0 /100.0 |
23 /23 |
R1AB_SARS2 Non-structural protein 3 | |
8uob[1] | B |
XB5
5-[2-(dimethylamino)ethoxy]-N-{(1R)-1-[(3M,5P)-3-(.. |
A | 100.0 /100.0 |
13 /13 |
R1A_SARS2 Papain-like protease nsp3 | |
8uuf[1] | B |
XWO
N-{(1R)-1-[(3M,5P)-3,5-bis(1-methyl-1H-pyrazol-4-y.. |
A | 100.0 /100.0 |
13 /13 |
R1A_SARS2 Papain-like protease nsp3 | |
8uug[1] | B |
XXW
N-[(1R)-1-{(3M,5M)-3-[1-(difluoromethyl)-1H-pyrazo.. |
A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 Papain-like protease nsp3 | |
8uuh[1] | B |
XYI
5-[2-(dimethylamino)ethoxy]-2-methyl-N-[(1R)-1-{(3.. |
A | 100.0 /100.0 |
15 /15 |
R1A_SARS2 Papain-like protease nsp3 | |
8uuu[1] | B |
XYR
N-{(1R)-1-[(3P,5M)-3-[1-(difluoromethyl)-1H-pyrazo.. |
A | 100.0 /100.0 |
15 /15 |
R1A_SARS2 Papain-like protease nsp3 | |
8uuv[1] | B |
Y2I
N-{(1R)-1-[(3P,5P)-3-(1-cyclopropyl-1H-pyrazol-4-y.. |
A | 100.0 /100.0 |
15 /15 |
R1A_SARS2 Papain-like protease nsp3 | |
8uuw[1] | B |
Y2N
5-[2-(dimethylamino)ethoxy]-2-methyl-N-{(1R)-1-[(3.. |
A | 100.0 /100.0 |
14 /14 |
R1A_SARS2 Papain-like protease nsp3 | |
8uvm[4] | E |
Y3R
ethyl 4-oxo-4-(2-{3-[2-({(1S)-1-[(3P)-3-(thiophen-.. |
A | 100.0 /100.0 |
19 /19 |
R1AB_SARS2 Papain-like protease nsp3 | |
9azx[1] | E |
A1AH3
{(2R,3S,4R,5R)-5-[(8S)-4-aminopyrrolo[2,1-f][1,2,4.. |
B | 100.0 /100.0 |
24 /24 |
R1AB_SARS2 Non-structural protein 3 | |
7e35[2] | D |
GYX
N-[(3-acetamidophenyl)methyl]-1-[(1R)-1-naphthalen.. |
A | 100.0 /99.7 |
11 /11 |
R1AB_SARS2 Non-structural protein 3 | |
7e35[2] | F |
GYX
N-[(3-acetamidophenyl)methyl]-1-[(1R)-1-naphthalen.. |
A | 100.0 /99.7 |
7 /7 |
R1AB_SARS2 Non-structural protein 3 | |
7jit[1] | B |
Y95
5-[(carbamoylcarbamoyl)amino]-2-methyl-N-[(1R)-1-(.. |
A | 100.0 /99.7 |
11 /11 |
R1A_SARS2 Papain-like protease | |
7koj[1] | B |
Y94
2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]-5-{[(pr.. |
A | 100.0 /99.7 |
11 /11 |
R1A_SARS2 Papain-like protease | |
7sgu[1] | B |
9EI
5-amino-N-(naphthalen-1-yl)pyridine-3-carboxamide[.. |
A | 100.0 /99.7 |
8 /8 |
R1A_SARS2 Papain-like protease | |
7d7k[4] | D |
CFF
CAFFEINE[14 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
7d7l[2] | E |
GXU
1-(2-methoxyethyl)-2-methyl-3-(pyrazin-2-ylmethyl).. |
A | 100.0 /99.7 |
9 /9 |
R1AB_SARS2 Non-structural protein 3 | |
7d7l[2] | F |
GXU
1-(2-methoxyethyl)-2-methyl-3-(pyrazin-2-ylmethyl).. |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
7d7l[1] | R |
GXU
1-(2-methoxyethyl)-2-methyl-3-(pyrazin-2-ylmethyl).. |
B | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
7m1y[2] | C |
9JT
N-phenyl-2-selanylbenzamide[16 atoms] |
A | 100.0 /99.7 |
7 /7 |
R1A_SARS2 Papain-like protease | |
7rzc[6] | D |
JWX
(1R)-N-[(1H-indol-3-yl)methyl]-N-methyl-1-(naphtha.. |
A | 100.0 /100.0 |
10 /10 |
R1A_SARS2 Non-structural protein 3 | |
7jn2[2] | B |
Y41
3-amino-2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl].. |
A | 100.0 /100.0 |
9 /9 |
R1A_SARS2 Papain-like protease | |
4ow0[2] | D |
S88
N-[(3-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-.. |
A | 100.0 /82.6 |
10 /10 |
R1A_CVHSA papain-like protease | |
7tzj[2] | C |
S88
N-[(3-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-.. |
A | 100.0 /99.7 |
10 /10 |
R1A_SARS2 Papain-like protease | |
7ybg[1] | C |
MLA
MALONIC ACID[7 atoms] |
A | 83.3 /99.1 |
6 /6 |
R1A_SARS2 Papain-like protease nsp3 | |
8tv7[1] | C |
VI1
(1R,2R)-2-{[3-(methoxycarbonyl)-4,5,6,7,8,9-hexahy.. |
A | 100.0 /98.8 |
14 /14 |
R1AB_SARS2 Papain-like protease nsp3 | |
4m0w[1] | E |
NHE
2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID[13 atoms.. |
A | 85.7 /82.3 |
7 /7 |
R1A_CVHSA Replicase polyprotein 1a | |
4m0w[1] | F |
NHE
2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID[13 atoms.. |
A | 83.3 /82.3 |
6 /6 |
R1A_CVHSA Replicase polyprotein 1a | |
3e9s[2] | B |
TTT
5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]be.. |
A | 100.0 /82.7 |
10 /10 |
R1A_CVHSA Non-structural protein 3 | |
7cjm[7] | B |
TTT
5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]be.. |
A | 100.0 /99.7 |
10 /10 |
R1AB_SARS2 Non-structural protein 3 | |
7skq[2] | E |
TTT
5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]be.. |
A | 100.0 /82.1 |
10 /10 |
Q0QDZ2_SARS 3C-like proteinase | |
7skr[2] | B |
9OZ
N-[(2-methoxypyridin-4-yl)methyl]-2-[(1R)-1-(napht.. |
A | 100.0 /82.1 |
10 /10 |
Q0QDZ2_SARS 3C-like proteinase | |
3mj5[2] | C |
GRM
N-(1,3-benzodioxol-5-ylmethyl)-1-[(1R)-1-naphthale.. |
A | 100.0 /82.7 |
9 /9 |
R1A_CVHSA Replicase polyprotein 1a | |
3mj5[2] | E |
GRM
N-(1,3-benzodioxol-5-ylmethyl)-1-[(1R)-1-naphthale.. |
A | 100.0 /82.7 |
4 /4 |
R1A_CVHSA Replicase polyprotein 1a | |
4ovz[2] | D |
P85
N-[(4-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-.. |
A | 100.0 /82.5 |
11 /11 |
R1A_CVHSA Papain-like proteinase | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
METAL | |||||||
1945 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
2fe8[6] | E |
BR
BROMIDE ION[1 atoms] |
A | 75.0 /82.8 |
4 /4 |
R1AB_CVHSA Replicase polyprotein 1ab | |
2fe8[6] | F |
BR
BROMIDE ION[1 atoms] |
A | 100.0 /82.8 |
3 /3 |
R1AB_CVHSA Replicase polyprotein 1ab | |
2fe8[6] | G |
BR
BROMIDE ION[1 atoms] |
A | 100.0 /82.8 |
4 /4 |
R1AB_CVHSA Replicase polyprotein 1ab | |
8cx9[1] | N |
BR
BROMIDE ION[1 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
8cx9[1] | P |
BR
BROMIDE ION[1 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
8cx9[1] | Q |
BR
BROMIDE ION[1 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
8cx9[1] | V |
BR
BROMIDE ION[1 atoms] |
D | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
3e9s[32] | D |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /82.7 |
2 /2 |
R1A_CVHSA Non-structural protein 3 | |
3e9s[10] | E |
CL
CHLORIDE ION[1 atoms] |
A | 75.0 /82.7 |
4 /4 |
R1A_CVHSA Non-structural protein 3 | |
6w9c[12] | E |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1A_SARS2 Non-structural protein 3 | |
6wen[1] | B |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Non-structural protein 3 | |
6wrh[16] | G |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /99.7 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
7jir[35] | H |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1A_SARS2 Papain-like protease | |
7jir[5] | J |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1A_SARS2 Papain-like protease | |
7lfv[1] | FA |
CL
CHLORIDE ION[1 atoms] |
B | 100.0 /82.8 |
1 /1 |
R1A_SARS papain-like protease | |
7los[3] | M |
CL
CHLORIDE ION[1 atoms] |
B | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Non-structural protein 3 | |
7m1y[2] | E |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1A_SARS2 Papain-like protease | |
7nfv[4] | F |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1A_SARS2 Papain-like protease nsp3 | |
7oft[1] | E |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
7oft[1] | F |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
7oft[1] | H |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1A_SARS2 Papain-like protease nsp3 | |
7oft[2] | I |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
7oft[1] | J |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
7qcj[4] | L |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
7qcj[1] | N |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
7qcm[2] | J |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
7sqe[1] | S |
CL
CHLORIDE ION[1 atoms] |
C | 100.0 /99.7 |
3 /3 |
R1A_SARS2 Papain-like protease | |
8cx9[1] | W |
CL
CHLORIDE ION[1 atoms] |
D | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
8fwo[1] | H |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Papain-like protease nsp3 | |
8ilc[1] | G |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
8ilc[1] | H |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
8ufl[1] | D |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /75.3 |
1 /1 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | E |
CL
CHLORIDE ION[1 atoms] |
A | 0.0 /75.3 |
1 /1 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | F |
CL
CHLORIDE ION[1 atoms] |
A | 50.0 /75.3 |
2 /2 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | H |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /75.3 |
1 /1 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | I |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /75.3 |
2 /2 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | J |
CL
CHLORIDE ION[1 atoms] |
A | 0.0 /75.3 |
1 /1 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | Q |
CL
CHLORIDE ION[1 atoms] |
B | 50.0 /75.4 |
2 /2 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | S |
CL
CHLORIDE ION[1 atoms] |
B | 0.0 /75.4 |
1 /1 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | T |
CL
CHLORIDE ION[1 atoms] |
B | 0.0 /75.4 |
1 /1 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | V |
CL
CHLORIDE ION[1 atoms] |
B | 100.0 /75.4 |
2 /2 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | W |
CL
CHLORIDE ION[1 atoms] |
B | 100.0 /75.4 |
1 /1 |
R1A_SARS Papain-like protease nsp3 | |
8uuf[1] | I |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
8uuv[1] | I |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
8uuw[1] | K |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
4m0w[2] | D |
NA
SODIUM ION[1 atoms] |
A | 20.0 /82.3 |
5 /5 |
R1A_CVHSA Replicase polyprotein 1a | |
4ovz[3] | H |
NA
SODIUM ION[1 atoms] |
B | 100.0 /81.3 |
5 /5 |
R1A_CVHSA Papain-like proteinase | |
5y3e[2] | D |
NA
SODIUM ION[1 atoms] |
A | 40.0 /82.8 |
5 /5 |
R1A_CVHSA Replicase polyprotein 1a | |
5y3e[2] | E |
NA
SODIUM ION[1 atoms] |
A | 83.3 /82.8 |
6 /6 |
R1A_CVHSA Replicase polyprotein 1a | |
5y3e[4] | F |
NA
SODIUM ION[1 atoms] |
A | 100.0 /82.8 |
3 /3 |
R1A_CVHSA Replicase polyprotein 1a | |
5y3e[2] | G |
NA
SODIUM ION[1 atoms] |
A | 100.0 /82.8 |
7 /7 |
R1A_CVHSA Replicase polyprotein 1a | |
6z5t[6] | D |
NA
SODIUM ION[1 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z6i[1] | K |
NA
SODIUM ION[1 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z6i[2] | Q |
NA
SODIUM ION[1 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z6i[5] | AA |
NA
SODIUM ION[1 atoms] |
C | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z6i[1] | Z |
NA
SODIUM ION[1 atoms] |
C | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z6i[1] | KA |
NA
SODIUM ION[1 atoms] |
D | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Replicase polyprotein 1ab | |
7ybg[1] | F |
NA
SODIUM ION[1 atoms] |
A | 100.0 /99.1 |
4 /4 |
R1A_SARS2 Papain-like protease nsp3 | |
8cx9[2] | R |
NA
SODIUM ION[1 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
6wuu[1] | K |
MG
MAGNESIUM ION[1 atoms] |
B | 100.0 /99.4 |
1 /1 |
R1AB_SARS2 Non-structural protein 3 | |
6wuu[1] | M |
MG
MAGNESIUM ION[1 atoms] |
C | 100.0 /99.7 |
1 /1 |
R1AB_SARS2 Non-structural protein 3 | |
6wuu[1] | O |
MG
MAGNESIUM ION[1 atoms] |
D | 100.0 /99.7 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
6wuu[1] | P |
MG
MAGNESIUM ION[1 atoms] |
D | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
6ywk[4] | I |
MG
MAGNESIUM ION[1 atoms] |
C | 100.0 /100.0 |
1 /4 |
R1AB_SARS2 NSP3 macrodomain | |
7bf5[1] | F |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 NSP3 macrodomain | |
7oft[1] | L |
K
POTASSIUM ION[1 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
7oft[1] | M |
K
POTASSIUM ION[1 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
2fe8[142] | D |
ZN
ZINC ION[1 atoms] |
A | 100.0 /82.8 |
4 /4 |
R1AB_CVHSA Replicase polyprotein 1ab | |
6w9c[4] | H |
ZN
ZINC ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Non-structural protein 3 | |
7cjm[1] | C |
ZN
ZINC ION[1 atoms] |
A | 100.0 /99.7 |
1 /1 |
R1AB_SARS2 Non-structural protein 3 | |
7cjm[18] | D |
ZN
ZINC ION[1 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
7cmd[1] | J |
ZN
ZINC ION[1 atoms] |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
7cmd[2] | K |
ZN
ZINC ION[1 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
7cmd[1] | L |
ZN
ZINC ION[1 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
7jir[13] | D |
ZN
ZINC ION[1 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1A_SARS2 Papain-like protease | |
7jir[25] | E |
ZN
ZINC ION[1 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1A_SARS2 Papain-like protease | |
7jir[19] | F |
ZN
ZINC ION[1 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1A_SARS2 Papain-like protease | |
7tzj[2] | D |
ZN
ZINC ION[1 atoms] |
A | 100.0 /99.7 |
1 /1 |
R1A_SARS2 Papain-like protease | |
7tzj[2] | K |
ZN
ZINC ION[1 atoms] |
B | 100.0 /99.7 |
1 /1 |
R1A_SARS2 Papain-like protease | |
8eua[1] | D |
ZN
ZINC ION[1 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Papain-like protease nsp3 | |
8uuy[1] | F |
ZN
ZINC ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
8uuy[1] | J |
ZN
ZINC ION[1 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
7m1y[2] | G |
IOD
IODIDE ION[1 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1A_SARS2 Papain-like protease | |
7m1y[2] | H |
IOD
IODIDE ION[1 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1A_SARS2 Papain-like protease | |
7m1y[2] | I |
IOD
IODIDE ION[1 atoms] |
A | 100.0 /99.7 |
1 /1 |
R1A_SARS2 Papain-like protease | |
7m1y[2] | J |
IOD
IODIDE ION[1 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1A_SARS2 Papain-like protease | |
7m1y[2] | K |
IOD
IODIDE ION[1 atoms] |
A | 100.0 /99.7 |
1 /1 |
R1A_SARS2 Papain-like protease | |
7m1y[2] | L |
IOD
IODIDE ION[1 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1A_SARS2 Papain-like protease | |
7m1y[1] | Y |
IOD
IODIDE ION[1 atoms] |
B | 100.0 /99.7 |
1 /1 |
R1A_SARS2 Papain-like protease | |
7jn2[19] | M |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease | |
7koj[11] | M |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1A_SARS2 Papain-like protease | |
7d47[1] | D |
CA
CALCIUM ION[1 atoms] |
A | 100.0 /99.7 |
1 /1 |
R1A_SARS2 Non-structural protein 3 | |
7d47[1] | F |
CA
CALCIUM ION[1 atoms] |
B | 75.0 /99.7 |
4 /4 |
R1A_SARS2 Non-structural protein 3 | |
8hbl[1] | C |
LI
LITHIUM ION[1 atoms] |
A | 100.0 /99.2 |
4 /4 |
R1A_SARS2 Non-structural protein 3 | |
7lfv[1] | DA |
NH4
AMMONIUM ION[1 atoms] |
B | 100.0 /82.8 |
2 /2 |
R1A_SARS papain-like protease | |
5e6j[1] | H |
NI
NICKEL (II) ION[1 atoms] |
A | 0.0 /82.0 |
2 /2 |
R1AB_CVHSA Replicase polyprotein 1ab | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
1945 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6w9c[18] | B | R1A_SARS2 Non-structural protein 3[307 aa] | A | 100.0 /100.0 |
5 /5 |
R1A_SARS2 Non-structural protein 3 | |
6xg3[2] | A | R1AB_SARS2 Non-structural protein 3[313 aa] | A | 100.0 /99.7 |
24 /24 |
R1AB_SARS2 Non-structural protein 3 | |
7cjd[2] | D | R1AB_SARS2 Non-structural protein 3[310 aa] | A | 100.0 /99.7 |
14 /14 |
R1AB_SARS2 Non-structural protein 3 | |
2fe8[6] | B | R1AB_CVHSA Replicase polyprotein 1ab[314 aa] | A | 87.0 /82.8 |
23 /23 |
R1AB_CVHSA Replicase polyprotein 1ab | |
2fe8[6] | B | R1AB_CVHSA Replicase polyprotein 1ab[314 aa] | A | 75.0 /82.8 |
8 /9 |
R1AB_CVHSA Replicase polyprotein 1ab | |
2fe8[8] | C | R1AB_CVHSA Replicase polyprotein 1ab[313 aa] | A | 77.8 /82.8 |
18 /18 |
R1AB_CVHSA Replicase polyprotein 1ab | |
7skq[2] | B | Q0QDZ2_SARS 3C-like proteinase[304 aa] | A | 90.0 /82.1 |
20 /20 |
Q0QDZ2_SARS 3C-like proteinase | |
7skr[2] | A | Q0QDZ2_SARS 3C-like proteinase[314 aa] | A | 85.2 /82.1 |
27 /27 |
Q0QDZ2_SARS 3C-like proteinase | |
2w2g[6] | B | R1A_CVHSA NON-STRUCTURAL PROTEIN 3[256 aa] | A | 78.3 /76.3 |
23 /23 |
R1A_CVHSA NON-STRUCTURAL PROTEIN 3 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
1945 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
2fe8[17] | H |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /82.8 |
4 /4 |
R1AB_CVHSA Replicase polyprotein 1ab | |
2w2g[4] | C |
SO4
SULFATE ION[5 atoms] |
A | 33.3 /76.3 |
3 /3 |
R1A_CVHSA NON-STRUCTURAL PROTEIN 3 | |
5s4g[1] | E |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Non-structural protein 3 | |
5tl6[3] | F |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /82.9 |
3 /3 |
R1AB_CVHSA Replicase polyprotein 1ab | |
7d7k[4] | L |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.7 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
7d7k[5] | M |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
7d7k[2] | N |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
7d7k[1] | W |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /99.7 |
3 /3 |
R1AB_SARS2 Non-structural protein 3 | |
7d7l[1] | J |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1AB_SARS2 Non-structural protein 3 | |
7d7l[1] | K |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
7d7l[1] | V |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
7jrn[1] | E |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Non-structural protein 3 | |
7jrn[4] | F |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Non-structural protein 3 | |
7jrn[11] | I |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Non-structural protein 3 | |
7jrn[2] | J |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1A_SARS2 Non-structural protein 3 | |
7lbs[1] | H |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1A_SARS2 Non-structural protein 3 | |
7llf[2] | H |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Non-structural protein 3 | |
7llz[3] | L |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1A_SARS2 Non-structural protein 3 | |
7nt4[1] | K |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
7nt4[2] | T |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Non-structural protein 3 | |
7nt4[2] | U |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
8ilc[1] | B |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1A_SARS2 Papain-like protease nsp3 | |
8ilc[1] | C |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
8ilc[1] | D |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
8ufl[2] | L |
SO4
SULFATE ION[5 atoms] |
A | 75.0 /75.3 |
4 /4 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | O |
SO4
SULFATE ION[5 atoms] |
A | 33.3 /75.3 |
3 /3 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[2] | P |
SO4
SULFATE ION[5 atoms] |
A | 50.0 /75.3 |
2 /2 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[3] | AA |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /75.4 |
1 /1 |
R1A_SARS Papain-like protease nsp3 | |
8ufl[1] | Y |
SO4
SULFATE ION[5 atoms] |
B | 50.0 /75.4 |
2 /2 |
R1A_SARS Papain-like protease nsp3 | |
8ufm[1] | D |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.2 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
8ufm[1] | F |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.2 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
8ufm[1] | G |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.2 |
4 /4 |
R1A_SARS2 Papain-like protease nsp3 | |
8ufm[1] | H |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.2 |
5 /5 |
R1A_SARS2 Papain-like protease nsp3 | |
8ufm[1] | J |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /99.2 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
8uvm[4] | F |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Papain-like protease nsp3 | |
4m0w[4] | G |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /82.3 |
5 /5 |
R1A_CVHSA Replicase polyprotein 1a | |
4m0w[4] | H |
GOL
GLYCEROL[6 atoms] |
A | 66.7 /82.3 |
6 /6 |
R1A_CVHSA Replicase polyprotein 1a | |
4ow0[1] | F |
GOL
GLYCEROL[6 atoms] |
A | 66.7 /82.6 |
3 /3 |
R1A_CVHSA papain-like protease | |
5y3e[4] | I |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /82.8 |
6 /6 |
R1A_CVHSA Replicase polyprotein 1a | |
5y3e[1] | J |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /82.8 |
5 /5 |
R1A_CVHSA Replicase polyprotein 1a | |
6wrh[14] | H |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1AB_SARS2 Non-structural protein 3 | |
6wrh[4] | I |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /99.7 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
6xa9[5] | G |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
6xa9[2] | H |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Non-structural protein 3 | |
6xa9[1] | P |
GOL
GLYCEROL[6 atoms] |
E | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
6z6i[1] | H |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z6i[4] | N |
GOL
GLYCEROL[6 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z6i[2] | S |
GOL
GLYCEROL[6 atoms] |
C | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Replicase polyprotein 1ab | |
7d7l[1] | L |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /99.7 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
7lbr[3] | G |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Non-structural protein 3 | |
7lbr[2] | L |
GOL
GLYCEROL[6 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1A_SARS2 Non-structural protein 3 | |
7lbs[1] | M |
GOL
GLYCEROL[6 atoms] |
B | 100.0 /100.0 |
6 /6 |
R1A_SARS2 Non-structural protein 3 | |
7nfv[2] | C |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1A_SARS2 Papain-like protease nsp3 | |
7ofu[8] | D |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1A_SARS2 Papain-like protease nsp3 | |
7qcg[1] | C |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
7qcj[2] | E |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
8f2e[2] | B |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Papain-like protease nsp3 | |
8f2e[1] | C |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Papain-like protease nsp3 | |
8f2e[1] | D |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Papain-like protease nsp3 | |
8f2e[1] | G |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Papain-like protease nsp3 | |
8hbl[1] | D |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /99.2 |
3 /3 |
R1A_SARS2 Non-structural protein 3 | |
8hbl[1] | E |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /99.2 |
4 /4 |
R1A_SARS2 Non-structural protein 3 | |
8hbl[1] | F |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /99.2 |
3 /3 |
R1A_SARS2 Non-structural protein 3 | |
8hbl[1] | G |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /99.2 |
2 /2 |
R1A_SARS2 Non-structural protein 3 | |
8tv7[1] | B |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /98.8 |
4 /4 |
R1AB_SARS2 Papain-like protease nsp3 | |
8uuu[1] | N |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
4ovz[3] | E |
DMS
DIMETHYL SULFOXIDE[4 atoms] |
A | 100.0 /82.5 |
4 /4 |
R1A_CVHSA Papain-like proteinase | |
4ovz[1] | I |
DMS
DIMETHYL SULFOXIDE[4 atoms] |
B | 33.3 /81.3 |
3 /3 |
R1A_CVHSA Papain-like proteinase | |
4ovz[1] | J |
DMS
DIMETHYL SULFOXIDE[4 atoms] |
B | 100.0 /81.3 |
3 /3 |
R1A_CVHSA Papain-like proteinase | |
4ovz[1] | L |
DMS
DIMETHYL SULFOXIDE[4 atoms] |
B | 66.7 /81.3 |
6 /6 |
R1A_CVHSA Papain-like proteinase | |
4ow0[1] | G |
DMS
DIMETHYL SULFOXIDE[4 atoms] |
A | 60.0 /82.6 |
5 /5 |
R1A_CVHSA papain-like protease | |
4ow0[1] | J |
DMS
DIMETHYL SULFOXIDE[4 atoms] |
B | 50.0 /81.1 |
2 /2 |
R1A_CVHSA papain-like protease | |
7skr[2] | C |
DMS
DIMETHYL SULFOXIDE[4 atoms] |
A | 100.0 /82.1 |
2 /2 |
Q0QDZ2_SARS 3C-like proteinase | |
7tzj[2] | H |
DMS
DIMETHYL SULFOXIDE[4 atoms] |
A | 100.0 /99.7 |
5 /5 |
R1A_SARS2 Papain-like protease | |
8uuw[1] | C |
DMS
DIMETHYL SULFOXIDE[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
5e6j[1] | G |
ACT
ACETATE ION[4 atoms] |
A | 83.3 /82.0 |
6 /6 |
R1AB_CVHSA Replicase polyprotein 1ab | |
7jir[6] | L |
ACT
ACETATE ION[4 atoms] |
A | 85.7 /99.7 |
7 /7 |
R1A_SARS2 Papain-like protease | |
7jit[3] | L |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /99.7 |
5 /5 |
R1A_SARS2 Papain-like protease | |
7jn2[2] | L |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease | |
8fwn[1] | G |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Papain-like protease nsp3 | |
8g62[3] | J |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Non-structural protein 3 | |
8g62[2] | K |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1A_SARS2 Non-structural protein 3 | |
8g62[1] | L |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1A_SARS2 Non-structural protein 3 | |
8uuf[1] | C |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
8uug[4] | D |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Papain-like protease nsp3 | |
6ywk[2] | J |
EPE
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACI.. |
C | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 NSP3 macrodomain | |
6ywk[1] | CA |
EPE
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACI.. |
E | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 NSP3 macrodomain | |
6ywm[1] | D |
MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms] |
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 NSP3 macrodomain | |
7jir[5] | K |
MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1A_SARS2 Papain-like protease | |
7jiw[2] | K |
MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1A_SARS2 Papain-like protease | |
7h0e[1] | E |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0e[2] | F |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0g[1] | D |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Papain-like protease nsp3 | |
7h0g[1] | G |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Papain-like protease nsp3 | |
8uuh[1] | C |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
8uuh[2] | D |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
7lbs[2] | F |
BO3
BORIC ACID[4 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1A_SARS2 Non-structural protein 3 | |
7lbs[2] | G |
BO3
BORIC ACID[4 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1A_SARS2 Non-structural protein 3 | |
7lbs[1] | I |
BO3
BORIC ACID[4 atoms] |
A | 100.0 /100.0 |
10 /10 |
R1A_SARS2 Non-structural protein 3 | |
7lbs[1] | O |
BO3
BORIC ACID[4 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Non-structural protein 3 | |
8uuy[1] | D |
PGE
TRIETHYLENE GLYCOL[10 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
5s74[138] | E |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
6ywk[3] | L |
EDO
1,2-ETHANEDIOL[4 atoms] |
C | 100.0 /100.0 |
2 /3 |
R1AB_SARS2 NSP3 macrodomain | |
6ywk[1] | W |
EDO
1,2-ETHANEDIOL[4 atoms] |
D | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 NSP3 macrodomain | |
6ywk[1] | Z |
EDO
1,2-ETHANEDIOL[4 atoms] |
D | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 NSP3 macrodomain | |
6ywl[7] | H |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 NSP3 macrodomain | |
6ywm[1] | I |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 NSP3 macrodomain | |
6z6i[2] | IA |
EDO
1,2-ETHANEDIOL[4 atoms] |
D | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Replicase polyprotein 1ab | |
6z72[1] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Replicase polyprotein 1ab | |
7cjd[1] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /99.7 |
1 /1 |
R1AB_SARS2 Non-structural protein 3 | |
7d7k[1] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
7d7k[1] | J |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
7lfv[1] | H |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 75.0 /82.7 |
4 /4 |
R1A_SARS papain-like protease | |
7lfv[2] | O |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 75.0 /82.7 |
4 /4 |
R1A_SARS papain-like protease | |
7lfv[2] | P |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 57.1 /82.7 |
7 /7 |
R1A_SARS papain-like protease | |
7lfv[1] | BA |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 75.0 /82.8 |
4 /4 |
R1A_SARS papain-like protease | |
7nt4[1] | I |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
7nt4[1] | P |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Non-structural protein 3 | |
7nt4[1] | R |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 3 | |
7rzc[2] | O |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1A_SARS2 Non-structural protein 3 | |
7uv5[1] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.4 |
5 /5 |
R1A_SARS2 Papain-like protease nsp3 | |
6wrh[3] | C |
PO4
PHOSPHATE ION[5 atoms] |
A | 83.3 /99.7 |
6 /6 |
R1AB_SARS2 Non-structural protein 3 | |
6wrh[3] | D |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Non-structural protein 3 | |
6wrh[2] | E |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /99.7 |
5 /5 |
R1AB_SARS2 Non-structural protein 3 | |
7d6h[1] | C |
PO4
PHOSPHATE ION[5 atoms] |
A | 83.3 /99.7 |
6 /6 |
R1A_SARS2 Papain-like protease | |
7nfv[11] | E |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1A_SARS2 Papain-like protease nsp3 | |
7ofu[3] | G |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1A_SARS2 Papain-like protease nsp3 | |
7ofu[3] | H |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
7ofu[6] | I |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
7qch[3] | G |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1A_SARS2 Papain-like protease nsp3 | |
7qci[1] | I |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
7qcj[2] | J |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1A_SARS2 Papain-like protease nsp3 | |
7qcj[1] | K |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1A_SARS2 Papain-like protease nsp3 | |
8fwn[1] | B |
PO4
PHOSPHATE ION[5 atoms] |
A | 83.3 /99.7 |
6 /6 |
R1AB_SARS2 Papain-like protease nsp3 | |
8hbl[1] | B |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /99.2 |
3 /3 |
R1A_SARS2 Non-structural protein 3 | |
7m1y[1] | M |
FMT
FORMIC ACID[3 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1A_SARS2 Papain-like protease | |
7m1y[2] | N |
FMT
FORMIC ACID[3 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1A_SARS2 Papain-like protease | |
7m1y[1] | O |
FMT
FORMIC ACID[3 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1A_SARS2 Papain-like protease | |
7m1y[1] | BA |
FMT
FORMIC ACID[3 atoms] |
B | 100.0 /99.7 |
4 /4 |
R1A_SARS2 Papain-like protease | |
7sgu[1] | G |
FMT
FORMIC ACID[3 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1A_SARS2 Papain-like protease | |
8ufm[1] | B |
FMT
FORMIC ACID[3 atoms] |
A | 100.0 /99.2 |
3 /3 |
R1A_SARS2 Papain-like protease nsp3 | |
7ybg[1] | B |
DTT
2,3-DIHYDROXY-1,4-DITHIOBUTANE[8 atoms] |
A | 100.0 /99.1 |
9 /9 |
R1A_SARS2 Papain-like protease nsp3 | |
5y3q[1] | C |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
A | 100.0 /82.8 |
6 /6 |
R1A_CVHSA Replicase polyprotein 1a | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |