#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 4m0w_A_1_B_1

Protein Model on 4m0w_A_1_B_1 (TEMPLATE: 4m0w )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(queryA) A 1 (A) polymer(polypeptide(L)) [317 aa] Replicase polyprotein 1a :R1A_CVHSA
2 b B 1 (B) polymer(polypeptide(L)) [76 aa] Ubiquitin :RS27A_BOVIN 851W 854N 855N 856C(S) 857Y 907L 908G 909D 911R 912E 944L 948E 952Y 953M 968P 970T(V) 977K(Q) 992P 993P 1009Y 1013Y 1014Q 1015C 1016G 1018Y 1046T (identity: 88.5 %/82.3 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:4m0w_A_1 identity=82.3%
queryA       747:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL: 846
                :* ********** ***** ***************************  ****** *** ***** ******** * ***************** *** **:
4m0w_A_1       3:VKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGL: 102
SecStr          :  EEEEEEESSSSS EEEEEETTS HHHHTSSEEETTEE TTS   GGGTT EEEE   SHHHHHHHHHHH    TTHHHHHHHHHHHHTTS   EETTE:    
ExpBur          :eeebebebbbbeeeeeeeebbeeeebeeebeebbbebeebbeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeeb:    

queryA       847:TSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG: 946
                :********* **   ** *** * *** **** ******** *********** **************  * ***** * ********* ***  *** *:
4m0w_A_1     103:TSIKWADNNSYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTG: 202
SecStr          :E   S TT HHHHHHHHHHTTS   BSSHHHHHHHHHHHTT  HHHHHHHHHHHT  TT    HHHHHHHHHTTB  TT EEEEEEEETTTEEEEEEEEG:    
ExpBur          :bbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbebebeeeeebeebbeebbebbebeebebbbbebbeeeeeeeeeeee:    
Contact         :    b  bbbb                                                 bbb bb                               b  

queryA       947:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT:1046
                :************   * ** *** **  ** ******* ********* * *  *** ** *********** *** ***** **** *** ****** *:
4m0w_A_1     203:VEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVT: 302
SecStr          :GGGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SS EEEEEEEESSSEEEEETTEEEEESEEEEEEE:    
ExpBur          :bebbbbeebbbbeebbeebeeebeeeeebebbbeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeebbbebebeeeeebeebebbbb:    
Contact         : b   bb              b b      b              bb               b   bbbb b                           b

queryA      1047:DVFYKENSYTTTIKPVT:1063
                :****** ********* :
4m0w_A_1     303:DVFYKETSYTTTIKPVS: 319
SecStr          :EEEEE SEEE       :    
ExpBur          :bbbbebeeeebeeeeee:    


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