#WARNING:no index is registered index "YP_009725299.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725299.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [317 aa] | Replicase polyprotein 1a :R1A_CVHSA | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [76 aa] | Ubiquitin :RS27A_BOVIN | 851W 854N 855N 856C(S) 857Y 907L 908G 909D 911R 912E 944L 948E 952Y 953M 968P 970T(V) 977K(Q) 992P 993P 1009Y 1013Y 1014Q 1015C 1016G 1018Y 1046T (identity: 88.5 %/82.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4m0w_A_1 identity=82.3% |
queryA 747:VRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGL: 846 :* ********** ***** *************************** ****** *** ***** ******** * ***************** *** **: 4m0w_A_1 3:VKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGL: 102 SecStr : EEEEEEESSSSS EEEEEETTS HHHHTSSEEETTEE TTS GGGTT EEEE SHHHHHHHHHHH TTHHHHHHHHHHHHTTS EETTE: ExpBur :eeebebebbbbeeeeeeeebbeeeebeeebeebbbebeebbeeebeeebeeeebbbebeeeebeebbeebbeeeeeebbeebbebbeebeebebeebeeb: queryA 847:TSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG: 946 :********* ** ** *** * *** **** ******** *********** ************** * ***** * ********* *** *** *: 4m0w_A_1 103:TSIKWADNNSYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTG: 202 SecStr :E S TT HHHHHHHHHHTTS BSSHHHHHHHHHHHTT HHHHHHHHHHHT TT HHHHHHHHHTTB TT EEEEEEEETTTEEEEEEEEG: ExpBur :bbbeeeeebbbbbbbbbbbbbbebebebebbeebbeebeeeebbbbbbbbbbbbebebeeeeebeebbeebbebbebeebebbbbebbeeeeeeeeeeee: Contact : b bbbb bbb bb b queryA 947:VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPIT:1046 :************ * ** *** ** ** ******* ********* * * *** ** *********** *** ***** **** *** ****** *: 4m0w_A_1 203:VEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLCANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVT: 302 SecStr :GGGTEEES S HHHHHH EEEE TTSSEEEEEEEEEESSEEEEEEEEEEEEEETTS SEEEEEEE SS EEEEEEEESSSEEEEETTEEEEESEEEEEEE: ExpBur :bebbbbeebbbbeebbeebeeebeeeeebebbbeebebebbbbbbeeeeeebeeeebebbbbbeeeeeeeebbbbbeeebbbebebeeeeebeebebbbb: Contact : b bb b b b bb b bbbb b b queryA 1047:DVFYKENSYTTTIKPVT:1063 :****** ********* : 4m0w_A_1 303:DVFYKETSYTTTIKPVS: 319 SecStr :EEEEE SEEE : ExpBur :bbbbebeeeebeeeeee: |