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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ASM_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [534 aa] | Sphingomyelin phosphodiesterase :ASM_MOUSE | |
2 | b | T 1 (A) | non-polymer(SO4) | SULFATE ION | 537L(R) 540R 543E (identity: 66.7 %/88.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5fib_A_1 identity=88.4% |
queryA 88:NLTCPICKGLFTAINLGLKKEPNVARVGSVAIKLCNLLKIAPPAVCQSIVHLFEDDMVEVWRRSVLSPSEACGLLLGSTCGHWDIFSSWNISLPTVPKPP: 187 :***** ** **** * ***************** * * *** **** ******* **** **************** ******** ****** *****: 5fib_A_1 11:NLTCPACKVLFTALNHGLKKEPNVARVGSVAIKICKMLNIAPLDVCQSAVHLFEDDVVEVWTRSVLSPSEACGLLLGSSCGHWDIFSTWNISLPSVPKPP: 110 SecStr :TTHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHTT S HHHHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHH TTT TT SS : ExpBur :eeebeebeeebeeebeeeeeeeebeeebeebeeebeeeeeeeeebbeebeeeebebebebebebbbeeebbbbeeeeeebeeeebeeebebeeeeeeeee: queryA 188:PKPPSPPAPGAPVSRILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLESLLSGLGPAGPFDMVYWTGDIPAHDVW: 287 :*************** ********** ******* ************ ** * *** ****************** ******** **************: 5fib_A_1 111:PKPPSPPAPGAPVSRVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLESLLKGLGPAGPFEMVYWTGDIPAHDVW: 210 SecStr : TT EEEEEEE B TTB TTS TT SSSS SBTTS STT SS SSS B HHHHHHHHHTHHHH SEEEE B S GG: ExpBur :eeeeeeeeeebeebebbbbbbbbbbebbeeebbbebebebbbbeebeeeeeeeeebbebbbbbebbbbeebbebbbeebeebbebebbbbbbbbbbbbeb: queryA 288:HQTRQDQLRALTTVTALVRKFLGPVPVYPAVGNHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALSPYPGLRLISLNMNFC: 387 : * ********** * ************************ ****** ** ** **************** ** ********** * *************: 5fib_A_1 211:QQSRQDQLRALTTITDLVRKFLGPVPVYPAVGNHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALTPRPGLRLISLNMNFC: 310 SecStr :G HHHHHHHHHHHHHHHHHHHTTS EEE SSSSSSTT TT STTSSHHHHHHHHHHTTTTS HHHHHHHHHHS EEEEEETTEEEEE GGGG: ExpBur :ebeeebbeebbeebbebbeeebeeeebbbbbbbbbbbbbbbbbbeebeeeebbebbbebbbebbeebbeeebbeebeebbbbbbebbeebbbbbbbbbbb: queryA 388:SRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLKSWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSA: 487 :********************** ****** ************************* * ******** ************ ********************: 5fib_A_1 311:SRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLKSWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSA: 410 SecStr :BTT GGGTT SSGGGHHHHHHHHHHHHHHHT EEEEE SS GGGB HHHHHHHHHHHHHTTTTEEEEEE SS S EEEEEE TTTS SEEEEEEE S: ExpBur :beebbbbbbebebbeebbebbbebbbebbeeebebbbbbbbbbbebbebbbebbbbbbbbbbbbbbbbbbbebbbbbbbbbbbeeebeeebbbbbbbbbb: queryA 488:TTYIGLNPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLLYRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCG: 587 :** * ************** ******************** * * * *********** * ********* * *********************: 5fib_A_1 411:TTFINLNPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRLYRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCG: 510 SecStr :S TTT EEEEEEEE SSTT EEEEEEEE HHHHSSTT EEEEEHHHHHT S SSHHHHHHHHHHHHH HHHHHHHHHHHTTT SS : ExpBur :bbbeebbbbbbbbebbbeeeebbbbbbbbbbbbbbbeebeeeeeeeebeebbebeeebebeebbbebbeebbbebeeeeebbeebbebbbbbeeeeeebe: Contact : b b b queryA 588:TPCRLATLCAQLSARADSPALCRHLM: 613 :**************************: 5fib_A_1 511:TPCRLATLCAQLSARADSPALCRHLM: 536 SecStr :HHHHHHHHHHHH SSS GGGGTTT : ExpBur :eeeeeebbbebbbbbbebeebbeebe: |