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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IMA1_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [279 aa] | YIIIM5AII | |
2 | b | D 1 (D) | polymer(polypeptide(L)) [279 aa] | YIIIM5AII | 149S 150G 151T(G) 152S(N) 191G(S) 192D(G) 193G 194S(N) 239N 283N 308P(Q) 322T(S) 323G 326E 349T(E) 350N(Q) 390D(N) 391F(E) 392K (identity: 42.1 %/40.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5mff_C_1 identity=40.5% |
queryA 121:IPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSS: 220 : * * * * * * **** ** ** * ** ** ** ** * * *** *** * ** ** * ** * : 5mff_C_1 6:LPQMVQQLNSPDQQELQ-SALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-: 103 SecStr :HHHHHHTTS S HHHHH-HHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT HH-: ExpBur :eeebbeebebeeeeebb-ebbeebbeebeeeeeebeebbeeebbebbbebbeeebeebbeebbebbbbbbebeeebbbebbeeebbeebbebbebeeee-: Contact : bbbb bbbb queryA 221:LACGYLRNLTWTLSNLCR--NKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIG: 318 : * * *** * *** ** ** ** * ** * * ** * * * * ** ** * ** * : 5mff_C_1 104:----ILQEALWALSNIASGGNEQIQAVIDAG--ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALS: 197 SecStr :----HHHHHHHHHHHHTTS HHHHHHHHHTT--HHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHH: ExpBur :----bbebbbebbbbbbebeeebbbbbbeee--bbeebbebbebeeeebbbbbbebbbbbbebeeebbebbbeeebbeebbebbebebeebbebbbebbb: Contact : bbb b b queryA 319:NIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEA: 397 :** * ** * ******* ** * * ** * *** * * * * * * * * ****: 5mff_C_1 198:NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEA: 276 SecStr :HHTTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHH: ExpBur :bbbebbeebbbbbbeeebbebbbebbebebeebbebbbebbbbbbebeeebeebbeeeebeeebeebeeeebeebeeeb: Contact : bb b bb bbb |