Protein Model on 5mff assembly_id=2
(TEMPLATE: 
5mff
assembly_id:2
)Protein Model on 5mff assembly_id=2
(TEMPLATE: 5mff
assembly_id:2
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| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(IMA1_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [279 aa] | YIIIM5AII | |
| 2 | b | D 1 (D) | polymer(polypeptide(L)) [279 aa] | YIIIM5AII | 149S 150G 151T(G) 152S(N) 191G(S) 192D(G) 193G 194S(N) 239N 283N 308P(Q) 322T(S) 323G 326E 349T(E) 350N(Q) 390D(N) 391F(E) 392K (identity: 42.1 %/40.5 %) | |
| 3 | c | F 1 (F) | polymer(polypeptide(L)) [10 aa] | (RR)5 | 180E(Q) 181Q(E) 184W 227R(Q) 228N(E) 231W 270D(E) 273W 311T(Q) 312P(E) 315R(W) 353K(Q) 354E 357W (identity: 35.7 %/40.5 %) | |
| 4 | d | L 1 (C) | non-polymer(EDO) | 1,2-ETHANEDIOL | 332I 333D 335G (identity: 100.0 %/40.5 %) | |
| 5 | e | M 1 (C) | non-polymer(EDO) | 1,2-ETHANEDIOL | 273W 276S 277Y(N) 280D(S) 315R(W) 319N (identity: 50.0 %/40.5 %) | |
| 6 | f | N 1 (C) | non-polymer(EDO) | 1,2-ETHANEDIOL | 193G 194S(N) 195V(E) (identity: 33.3 %/40.5 %) | |
| 7 | g | O 1 (C) | non-polymer(EDO) | 1,2-ETHANEDIOL | 282P(G) 283N 284E 285R(Q) (identity: 50.0 %/40.5 %) | |
| 8 | h | P 1 (D) | non-polymer(EDO) | 1,2-ETHANEDIOL | 150G 151T(G) 152S(N) (identity: 33.3 %/40.5 %) | |
| 9 | i | Q 1 (D) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 10 | j | R 1 (D) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| 11 | k | T 1 (F) | non-polymer(EDO) | 1,2-ETHANEDIOL | ||
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5mff_C_1 identity=40.5% |
queryA 121:IPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSS: 220
: * * * * * * **** ** ** * ** ** ** ** * * *** *** * ** ** * ** * :
5mff_C_1 6:LPQMVQQLNSPDQQELQ-SALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQ-: 103
SecStr :HHHHHHTTS S HHHHH-HHHHHHHHHTTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT HH-:
ExpBur :eeebbeebebeeeeebb-ebbeebbeebeeeeeebeebbeeebbebbbebbeeebeebbeebbebbbbbbebeeebbbebbeeebbeebbebbebeeee-:
Contact : bbbb cc c bbbbf
Contact : hhh ff
queryA 221:LACGYLRNLTWTLSNLCR--NKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIG: 318
: * * *** * *** ** ** ** * ** * * ** * * * * ** ** * ** * :
5mff_C_1 104:----ILQEALWALSNIASGGNEQIQAVIDAG--ALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALS: 197
SecStr :----HHHHHHHHHHHHTTS HHHHHHHHHTT--HHHHHHHHTT S HHHHHHHHHHHHHHTTS HHHHHHHHHTTHHHHHHHHTT S HHHHHHHHHHHH:
ExpBur :----bbebbbebbbbbbebeeebbbbbbeee--bbeebbebbebeeeebbbbbbebbbbbbebeeebbebbbeeebbeebbebbebebeebbebbbebbb:
Contact : cc c bbb c c ee e gbgg b cc c
Contact : e g e
queryA 319:NIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEA: 397
:** * ** * ******* ** * * ** * *** * * * * * * * * ****:
5mff_C_1 198:NIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEA: 276
SecStr :HHTTS HHHHHHHHHTTHHHHHHHGGG S HHHHHHHHHHHHHHHTS HHHHHHHHHTTHHHHHHHHTT SSHHHHHHH:
ExpBur :bbbebbeebbbbbbeeebbebbbebbebebeebbebbbebbbbbbebeeebeebbeeeebeeebeebeeeebeebeeeb:
Contact :e bb b dd d bb cc c bbb
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