Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
2727836 | 179 | 7 | Q13241(KLRD1_HUMAN) | RecName: Full=Natural killer cells antigen CD94;AltName: Full=KP43;AltName: Full=Killer cell lectin-like receptor subfamily D member 1;AltName: Full=NK cell receptor;AltName: CD_antigen=CD94 ; |
QUERYSEQ |
MAVFKTTLWRLISGTLGIICLSLMSTLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFMSSSQQFYWIGLSYSEEHTAWLWENGSALSQYLFPSFETFNTK NCIAYNPNGNALDESCEDKNRYICKQQLI |
All | LB/B (likely benign or benign) | ||
Number of sites | 179 | 1 | |
Buired or Exposed | Buried | 39.8 (%) [49] | |
Exposed | 60.2 (%) [74] | ||
Ave relacc | 33.7 % | 0.0 % | |
SD relacc | 26.95 % | 0.00 % | |
Contact Mol | hetero | 18.4 (%) [33] | 0.0 (%) [0] |
nucleotide | 0.0 (%) [0] | 0.0 (%) [0] | |
compound | 0.0 (%) [0] | 0.0 (%) [0] | |
metal | 0.0 (%) [0] | 0.0 (%) [0] | |
otherpoly | 0.0 (%) [0] | 0.0 (%) [0] | |
homo | 0.0 (%) [0] | 0.0 (%) [0] | |
precipitant | 0.0 (%) [0] | 0.0 (%) [0] | |
Number of variants | 1 | 1 | |
N_Freq(AAvariant)==0 % | 0.0 % [0] | ||
N_Freq(AAvariant)>0 % | 100.0 % [1] | ||
Ave Freq(AAvariant) | 20.0 % | ||
SD Freq(AAvariant) | 0.00 % |
1 sites | 25 |
[n]:site number of query sequence. [a]:amino acid of query sequence. [s]:predicted secondary structure. [e]:predicted exposed/buried. [acc]:predicted relative accesssibility(%). [pdb]:PDB code of homologous structure. [contact_mols]:predicted binding molecules [observed aa]:Observed amino acids among homologous sequences. [feature table]:UniProt Feature Table [variant]:UniProt Human Variant.
n | a | s | e | acc | pdb | contact_mols | observed aa | feature table | variant |
25 | S | - | - | - | - | VASTFGICKM |
TRANSMEM /note="Helical; Signal-anchor for type II membrane protein" TRANSMEM /note="Helical; Signal-anchor for type II membrane protein" DISORDER predicted by DISOPRED | S->A:(20.0 %):LB/B - dbSNP:rs1077225 |