Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
2676554 | 163 | 19 | Q96PD4(IL17F_HUMAN) | RecName: Full=Interleukin-17F; Short=IL-17F;AltName: Full=Cytokine ML-1;Flags: Precursor; |
QUERYSEQ |
MTVKTLHGPAMVKYLLLSILGLAFLSEAAARKIPKVGHTFFQKPESCPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLGCINAQGKEDISMNSVPIQQETLVVRRKHQGCSVSFQLEKVLVTV GCTCVTPVIHHVQ |
All | 613956 Candidiasis, familial, 6 (CANDF6) | LB/B (likely benign or benign) | ||
Number of sites | 163 | 1 | 3 | |
Buired or Exposed | Buried | 12.3 (%) [16] | 0.0 (%) [0] | 0.0 (%) [0] |
Exposed | 87.7 (%) [114] | 100.0 (%) [1] | 100.0 (%) [3] | |
Ave relacc | 53.2 % | 32.8 % | 65.6 % | |
SD relacc | 28.33 % | 0.00 % | 23.19 % | |
Contact Mol | hetero | 57.7 (%) [94] | 100.0 (%) [1] | 100.0 (%) [3] |
nucleotide | 0.0 (%) [0] | 0.0 (%) [0] | 0.0 (%) [0] | |
compound | 3.7 (%) [6] | 0.0 (%) [0] | 0.0 (%) [0] | |
metal | 6.7 (%) [11] | 0.0 (%) [0] | 33.3 (%) [1] | |
otherpoly | 3.1 (%) [5] | 0.0 (%) [0] | 0.0 (%) [0] | |
homo | 49.1 (%) [80] | 0.0 (%) [0] | 66.7 (%) [2] | |
precipitant | 3.1 (%) [5] | 0.0 (%) [0] | 0.0 (%) [0] | |
Number of variants | 4 | 1 | 3 | |
N_Freq(AAvariant)==0 % | 100.0 % [1] | 66.7 % [2] | ||
N_Freq(AAvariant)>0 % | 0.0 % [0] | 33.3 % [1] | ||
Ave Freq(AAvariant) | 0.0 % | 4.7 % | ||
SD Freq(AAvariant) | 0.00 % | 6.60 % |
1 sites | 95 |
[n]:site number of query sequence. [a]:amino acid of query sequence. [s]:predicted secondary structure. [e]:predicted exposed/buried. [acc]:predicted relative accesssibility(%). [pdb]:PDB code of homologous structure. [contact_mols]:predicted binding molecules [observed aa]:Observed amino acids among homologous sequences. [feature table]:UniProt Feature Table [variant]:UniProt Human Variant.
n | a | s | e | acc | pdb | contact_mols | observed aa | feature table | variant |
![]() | S | S | e | 32.8 | ![]() |
hetero I17RC_HUMAN I17RA_HUMAN | SQARV |
S->L:(0.0 %):LP/P Candidiasis, familial, 6 (CANDF6) dbSNP:rs7484860 [MIM:613956] |
3 sites | 126,155,161 |
[n]:site number of query sequence. [a]:amino acid of query sequence. [s]:predicted secondary structure. [e]:predicted exposed/buried. [acc]:predicted relative accesssibility(%). [pdb]:PDB code of homologous structure. [contact_mols]:predicted binding molecules [observed aa]:Observed amino acids among homologous sequences. [feature table]:UniProt Feature Table [variant]:UniProt Human Variant.
n | a | s | e | acc | pdb | contact_mols | observed aa | feature table | variant |
![]() | E | E | e | 56.8 | ![]() |
hetero I17RC_HUMAN IL17_HUMAN I17RA_HUMAN metal CD homo | EQNPLS |
E->G:(0.0 %):LB/B - dbSNP:rs2397084 | |
![]() | V | E | e | 42.7 | ![]() |
hetero IL17_HUMAN homo | VI |
V->I:(14.0 %):LB/B - dbSNP:rs1146555 | |
![]() | H | S | e | 97.4 | ![]() |
hetero I17RC_HUMAN I17RA_HUMAN | HQN |
H->R:(0.0 %):LB/B - dbSNP:rs763780 |