Contact Molecules for Homologous Proteins

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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
2080 221 6 P59596(VME1_SARS) RecName: Full=Membrane protein ; Short=M protein ;AltName: Full=E1 glycoprotein ;AltName: Full=Matrix glycoprotein ;AltName: Full=Membrane glycoprotein ;
QUERYSEQ 
MADNGTITVEELKQLLEQWNLVIGFLFLAWIMLLQFAYSNRNRFLYIIKLVFLWLLWPVTLACFVLAAVYRINWVTGGIAIAMACIVGLMWLSYFVASFRLFARTRSMWSFNPETNILLNVPLRGTIVTRPLMESELVIGAVIIRGHLRM
AGHSLGRCDIKDLPKEITVATSRTLSYYKLGASQRVGTDSGFAAYNRYRIGNYKLNTDHAGSNDNIALLVQ
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P59596(VME1_SARS)]

221
region name description
1-221 CHAIN /note="Membrane protein" /id="PRO_0000106035"
1-18 TOPO_DOM /note="Virion surface"
19-39 TRANSMEM /note="Helical"
40-49 TOPO_DOM /note="Intravirion"
50-70 TRANSMEM /note="Helical"
71-78 TOPO_DOM /note="Virion surface"
79-99 TRANSMEM /note="Helical"
100-221 TOPO_DOM /note="Intravirion"
1-6 DISORDER predicted by DISOPRED

MONOMER
221
pdb_id a1 identity[%]2 description
7vgr E 91.4 VME1_SARS2 Membrane protein 
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.