Contact Molecules for Homologous Proteins

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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
1681663 165 500 P05161(ISG15_HUMAN) RecName: Full=Ubiquitin-like protein ISG15;AltName: Full=Interferon-induced 15 kDa protein;AltName: Full=Interferon-induced 17 kDa protein; Short=IP17;AltName: Full=Ubiquitin cross-reactive protein; Short=hUCRP;Flags: Precursor;
QUERYSEQ 
MGWDLTVKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFM
NLRLRGGGTEPGGRS
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P05161(ISG15_HUMAN)]

165
region name description
2-157 CHAIN /note="Ubiquitin-like protein ISG15" /id="PRO_0000035986"
158-165 PROPEP /note="Removed in mature form" /id="PRO_0000035987"
2-78 DOMAIN /note="Ubiquitin-like 1"
79-157 DOMAIN /note="Ubiquitin-like 2"
153-157 REGION /note="Involved in the ligation of specific target proteins"
1-165 DISORDER predicted by DISOPRED

MONOMER
165
pdb_id a1 identity[%]2 description
7rbs J 100.0 ISG15_HUMAN Ubiquitin-like protein ISG15 
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
165 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6ffa[1] A POLG_FMDVO Lbpro[156 aa] B 100.0
/100.0		 9
/10		 ISG15_HUMAN Ubiquitin-like protein ISG15
5w8t[4] B K0BWD0_9BETC ORF1ab[319 aa] A 100.0
/100.0		 17
/17		 ISG15_HUMAN Ubiquitin-like protein ISG15
6bi8[2] A K4LC41_9BETC ORF1a[259 aa] C 100.0
/99.3		 17
/17		 ISG15_HUMAN Ubiquitin-like protein ISG15
3phx[1] A L_CCHFI RNA-directed RNA polymerase L[162 aa] B 100.0
/100.0		 19
/19		 ISG15_HUMAN Ubiquitin-like protein ISG15
3phx[1] A L_CCHFI RNA-directed RNA polymerase L[162 aa] B 100.0
/100.0		 2
/2		 ISG15_HUMAN Ubiquitin-like protein ISG15
3pse[1] A Q6TQF5_9VIRU RNA polymerase[164 aa] B 100.0
/98.7		 15
/15		 ISG15_HUMAN Ubiquitin-like protein ISG15
6oar[4] A B8PWH5_9VIRU RNA-dependent RNA polymerase[158 aa] B 78.9
/73.3		 19
/19		 Q9GKP4_SHEEP Interferon stimulated gene 17
5chv[2] A UBP18_MOUSE Ubl carboxyl-terminal hydrolase 18[304 aa] B 58.1
/65.4		 31
/32		 ISG15_MOUSE Ubiquitin-like protein ISG15
3r66[10] A NS1_INBLE Non-structural protein 1[96 aa] C 100.0
/100.0		 11
/11		 ISG15_HUMAN Ubiquitin-like protein ISG15
3rt3[9] B NS1_INBLE Non-structural protein 1[94 aa] A 87.5
/99.3		 8
/8		 ISG15_HUMAN Ubiquitin-like protein ISG15
6oat[2] A A0A191KWA2_9VIRU RNA-dependent RNA polymerase[158 aa] B 86.7
/64.5		 15
/15		 Q9GKP4_SHEEP Interferon stimulated gene 17
4m0w[5] A R1A_CVHSA Replicase polyprotein 1a[317 aa] B 55.6
/36.8		 18
/18		 RS27A_BOVIN Ubiquitin
5jze[2] B J3RTH4_9VIRU RNA-dependent RNA polymerase[159 aa] A 61.1
/64.5		 18
/18		 ISG15_MOUSE Ubiquitin-like protein ISG15
2wwz[4] C TAB2_HUMAN MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-I.. A 25.0
/36.8		 8
/8		 UBIQ_BOVIN UBIQUITIN
5af6[5] H ZRAN1_HUMAN TRABID[28 aa] A 25.0
/38.2		 8
/8		 Q96C32_HUMAN UBIQUITIN
5gvi[1] A A0A0R4ILB8_DANRE Ubiquitin carboxyl-terminal hydrolase 30[326 aa] B 47.2
/38.2		 36
/36		 RS27A_MOUSE ubiquitin
4hcn[1] A Q63KH5_BURPS Putative ATP/GTP binding protein[245 aa] B 45.5
/37.7		 22
/22		 UBI4P_YEAST Polyubiquitin
7wfc[1] A U3N841_CVHK1 Papain-like protease[309 aa] B 50.0
/37.2		 20
/20		 L9KW39_TUPCH 60S ribosomal protein L40
1fxt[1] A UBC1_YEAST UBIQUITIN-CONJUGATING ENZYME E2-24 KDA[149 aa] B 50.0
/36.8		 18
/18		 UBIQ_HUMAN UBIQUITIN
1otr[1] A CUE2_YEAST protein Cue2[49 aa] B 45.5
/36.8		 11
/11		 UBIQ_YEAST Ubiquitin
1q0w[1] A VPS27_YEAST Vacuolar protein sorting-associated protein VPS27[.. B 38.5
/36.8		 13
/13		 UBIQ_YEAST Ubiquitin
1wr1[1] B DSK2_YEAST Ubiquitin-like protein DSK2[58 aa] A 22.2
/36.8		 9
/9		 UBIQ_YEAST Ubiquitin
1wrd[24] A TOM1_HUMAN Target of Myb protein 1[98 aa] B 40.0
/36.8		 10
/10		 UBIQ_BOVIN Ubiquitin
1wrd[24] A TOM1_HUMAN Target of Myb protein 1[98 aa] B 100.0
/36.8		 4
/4		 UBIQ_BOVIN Ubiquitin
1wrd[24] A TOM1_HUMAN Target of Myb protein 1[98 aa] B 46.2
/36.8		 13
/13		 UBIQ_BOVIN Ubiquitin
2den[1] A SPG1_STRSG UBL7_HUMAN Immunoglobulin G-binding protein G,Ubiquitin-like .. B 40.0
/36.8		 15
/15		 J3QS39_HUMAN Polyubiquitin-B
2fuh[29] A UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3[146 aa] B 40.0
/36.8		 10
/10		 UBIQ_HUMAN Ubiquitin
2g3q[1] A YBE7_YEAST Protein YBL047C[43 aa] B 30.0
/36.8		 10
/10		 UBIQ_YEAST Ubiquitin
2g45[2] A UBP5_HUMAN Ubiquitin carboxyl-terminal hydrolase 5[117 aa] B 80.0
/36.8		 10
/10		 UBIQ_HUMAN Ubiquitin
2gmi[1] A UBC13_YEAST Ubiquitin-conjugating enzyme E2 13[152 aa] C 50.0
/36.8		 2
/2		 UBIQ_PANTR Ubiquitin
2gmi[1] B MMS2_YEAST Ubiquitin-conjugating enzyme variant MMS2[135 aa] C 33.3
/36.8		 3
/3		 UBIQ_PANTR Ubiquitin
2hd5[3] A UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2[315 aa] B 41.7
/36.8		 36
/36		 Q24K23_BOVIN Polyubiquitin
2jri[1] A ATX3_HUMAN Ataxin-3[182 aa] C 58.8
/36.8		 17
/17		 Q96H31_HUMAN UBC protein
2jt4[1] A SLA1_YEAST Cytoskeleton assembly control protein SLA1[71 aa] B 30.0
/36.8		 10
/10		 UBIQ_YEAST Ubiquitin
2jy6[1] B UBQL1_HUMAN Ubiquilin-1[52 aa] A 30.8
/36.8		 13
/13		 Q96H31_HUMAN Ubiquitin protein
2k8b[1] B PLAP_HUMAN Phospholipase A-2-activating protein[80 aa] A 46.7
/36.8		 15
/15		 UBIQ_HUMAN Ubiquitin
2kde[4] A PSMD4_HUMAN 26S proteasome non-ATPase regulatory subunit 4[111.. B 42.9
/36.8		 7
/7		 UBIQ_XENLA Ubiquitin
2kwu[1] A POLI_MOUSE DNA polymerase iota[36 aa] B 45.5
/36.8		 11
/11		 UBIQ_HUMAN Ubiquitin
2kwv[1] A POLI_MOUSE DNA polymerase iota[36 aa] B 50.0
/36.8		 10
/10		 UBIQ_HUMAN Ubiquitin
2l0f[1] B POLI_HUMAN DNA polymerase iota[45 aa] A 29.4
/36.8		 17
/17		 UBIQ_HUMAN Ubiquitin
2l0t[1] B STAM2_HUMAN Signal transducing adapter molecule 2[163 aa] A 38.5
/36.8		 13
/13		 UBIQ_HUMAN Ubiquitin
2lvo[4] B AMFR2_HUMAN E3 ubiquitin-protein ligase AMFR[52 aa] A 44.4
/36.8		 18
/18		 UBC_HUMAN Ubiquitin
2lvp[1] C AMFR2_HUMAN E3 ubiquitin-protein ligase AMFR[52 aa] B 33.3
/36.8		 6
/6		 UBC_HUMAN Ubiquitin
2lz6[1] B CD2AP_MOUSE CD2-associated protein[60 aa] A 53.3
/36.8		 15
/15		 UBC_HUMAN Ubiquitin
2mbh[1] A KLF1_HUMAN Krueppel-like factor 1[19 aa] B 33.3
/36.8		 6
/6		 J3QS39_HUMAN Ubiquitin
2mcn[1] A CD2AP_MOUSE CD2-associated protein[57 aa] B 47.1
/36.8		 17
/17		 UBC_HUMAN Ubiquitin
2mj5[1] B NBR1_HUMAN Next to BRCA1 gene 1 protein[52 aa] A 27.3
/36.8		 11
/11		 UBC_HUMAN Polyubiquitin-C
2mre[1] B RAD18_HUMAN E3 ubiquitin-protein ligase RAD18[33 aa] A 40.0
/36.8		 10
/10		 UBC_HUMAN Polyubiquitin-C
2mro[1] B DDI1_YEAST DNA damage-inducible protein 1[44 aa] A 47.1
/36.8		 17
/17		 UBB_HUMAN Polyubiquitin-B
2mur[1] A FAP20_HUMAN Fanconi anemia-associated protein of 20 kDa[44 aa].. B 33.3
/36.8		 12
/12		 RL40_HUMAN Ubiquitin
2n3u[6] A RPN1_YEAST 26S proteasome regulatory subunit RPN1[131 aa] B 53.3
/36.8		 15
/15		 RL40_HUMAN Ubiquitin-60S ribosomal protein L40
2o6v[8] B UBIQ_HUMAN Ubiquitin[76 aa] C 66.7
/36.8		 3
/3		 UBIQ_HUMAN Ubiquitin
2o6v[3] B UBIQ_HUMAN Ubiquitin[76 aa] C 25.0
/36.8		 4
/4		 UBIQ_HUMAN Ubiquitin
2o6v[4] D UBIQ_HUMAN Ubiquitin[76 aa] C 50.0
/36.8		 14
/14		 UBIQ_HUMAN Ubiquitin
3a9j[6] A UBIQ_MOUSE Ubiquitin[76 aa] B 0.0
/36.8		 3
/3		 UBIQ_MOUSE Ubiquitin
4ldt[2] B UBC_HUMAN Ubiquitin aldehyde[76 aa] D 25.0
/36.8		 4
/4		 UBC_HUMAN Ubiquitin
2qho[1] D EDD1_HUMAN E3 ubiquitin-protein ligase EDD1[49 aa] C 36.4
/36.8		 11
/11		 UBIQ_BOVIN Ubiquitin
2rr9[1] C C9JR12_HUMAN Putative uncharacterized protein UIMC1[46 aa] B 50.0
/36.8		 10
/10		 UBC_HUMAN ubiquitin
2xbb[2] B NEDD4_HUMAN E3 UBIQUITIN-PROTEIN LIGASE NEDD4[376 aa] D 40.0
/36.8		 15
/15		 UBB_BOVIN UBIQUITIN
2z59[3] A ADRM1_MOUSE Protein ADRM1[109 aa] B 41.7
/36.8		 12
/12		 UBIQ_UBIQ_HUMAN Ubiquitin
6uyj[1] C ADRM1_HUMAN Proteasomal ubiquitin receptor ADRM1[113 aa] A 0.0
/36.8		 1
/1		 UBB_HUMAN Ubiquitin
3a9k[1] C TAB3_MOUSE Mitogen-activated protein kinase kinase kinase 7-i.. B 28.6
/36.8		 7
/7		 UBIQ_MOUSE Ubiquitin
3cmm[19] A UBA1_YEAST Ubiquitin-activating enzyme E1 1[1001 aa] C 44.0
/36.8		 25
/25		 UBIQ_YEAST Ubiquitin
7k5j[2] J UBA1_YEAST Ubiquitin-activating enzyme E1 1[979 aa] A 100.0
/36.8		 2
/2		 UBIQ_WHEAT Ubiquitin
3u30[2] B Light chain Fab[211 aa] A 33.3
/31.5		 6
/6		 UBC_HUMAN linear di-ubiquitin
7keo[2] B Synthetic antigen binding fragment, light chain[21.. D 100.0
/36.8		 1
/1		 UBC_HUMAN Ubiquitin
3vuy[3] B TNAP3_HUMAN Tumor necrosis factor alpha-induced protein 3[33 a.. A 33.3
/36.8		 15
/15		 UBC_HUMAN Polyubiquitin-C
4bos[2] A OTU1_HUMAN UBIQUITIN THIOESTERASE OTU1[164 aa] C 58.8
/36.8		 17
/17		 UBC_HUMAN POLYUBIQUITIN-C
4bos[1] B OTU1_HUMAN UBIQUITIN THIOESTERASE OTU1[164 aa] C 40.0
/36.8		 5
/5		 UBC_HUMAN POLYUBIQUITIN-C
4bos[1] E OTUD2[7 aa] C 100.0
/36.8		 1
/1		 UBC_HUMAN POLYUBIQUITIN-C
4ddg[22] A UB2D2_HUMAN OTUB1_HUMAN Ubiquitin-conjugating enzyme E2 D2, Ubiquitin thio.. D 42.1
/36.8		 19
/19		 UBC_HUMAN Polyubiquitin-C
4ii2[1] A UBA1_SCHPO Ubiquitin-activating enzyme E1 1[977 aa] B 48.3
/36.8		 29
/29		 RL402_SCHPO Ubiquitin-60S ribosomal protein L40
5knl[2] A UBA1_SCHPO Ubiquitin-activating enzyme E1 1[981 aa] B 45.8
/36.8		 24
/24		 A0A081CFF0_PSEA2 Ubiquitin
4ii2[1] C UBC4_SCHPO Ubiquitin-conjugating enzyme E2 4[149 aa] B 50.0
/36.8		 2
/2		 RL402_SCHPO Ubiquitin-60S ribosomal protein L40
4ldt[1] A OTUB1_HUMAN OTUBL_CAEEL Ubiquitin thioesterase otubain-like[255 aa] D 38.1
/36.8		 21
/21		 UBC_HUMAN Ubiquitin
4ljo[2] A RNF31_HUMAN E3 ubiquitin-protein ligase RNF31[216 aa] B 27.8
/36.8		 18
/18		 E1B9K1_BOVIN Polyubiquitin-C
4r62[1] A UBC2_YEAST Ubiquitin-conjugating enzyme E2 2[149 aa] B 60.0
/36.8		 5
/5		 RS27A_HUMAN Ubiquitin-40S ribosomal protein S27a
4wlr[1] A UCHL5_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L5[2.. C 44.4
/36.8		 18
/18		 UBB_HUMAN Polyubiquitin-B
4wlr[1] B ADRM1_HUMAN Proteasomal ubiquitin receptor ADRM1[99 aa] C 50.0
/36.8		 4
/4		 UBB_HUMAN Polyubiquitin-B
4xkh[1] H ZFN2B_MOUSE AN1-type zinc finger protein 2B[40 aa] G 33.3
/36.8		 12
/12		 UBC_BOVIN Polyubiquitin-C
4xkl[2] B CACO2_HUMAN Calcium-binding and coiled-coil domain-containing .. A 44.4
/36.8		 9
/9		 RL40_HUMAN Ubiquitin
4zux[5] EA UBP8_YEAST Ubiquitin carboxyl-terminal hydrolase 8[453 aa] HA 46.9
/36.8		 32
/32		 UBB_HUMAN Polyubiquitin-B
4zux[8] N H2B11_XENLA Histone H2B 1.1[95 aa] HA 100.0
/36.8		 1
/1		 UBB_HUMAN Polyubiquitin-B
5kgf[2] H H2B1C_HUMAN Histone H2B type 1-C/E/F/G/I[97 aa] L 50.0
/36.8		 2
/2		 UBB_HUMAN Ubiquitin
6ftx[1] D F6TNY0_XENTR Histone H2B[95 aa] K 100.0
/36.8		 1
/1		 UBB_HUMAN Polyubiquitin-B
5aiu[2] A RNF4_RAT E3 UBIQUITIN-PROTEIN LIGASE RNF4[123 aa] C 36.4
/36.8		 11
/11		 UBC_HUMAN POLYUBIQUITIN-C
5aiu[15] B UBE2N_HUMAN UBIQUITIN-CONJUGATING ENZYME E2 N[150 aa] C 44.4
/36.8		 18
/18		 UBC_HUMAN POLYUBIQUITIN-C
5d0m[1] B RN165_HUMAN RING finger protein 165[60 aa] C 33.3
/36.8		 3
/3		 UBB_HUMAN Polyubiquitin-B
5dfl[2] B UBE2K_HUMAN Ubiquitin-conjugating enzyme E2 K[199 aa] A 100.0
/36.8		 2
/2		 UBB_HUMAN Ubiquitin
6if1[2] B UBE2K_HUMAN Ubiquitin-conjugating enzyme E2 K[199 aa] C 28.6
/36.8		 7
/7		 UBB_HUMAN Ubiquitin
5edv[2] A RNF31_HUMAN E3 ubiquitin-protein ligase RNF31[286 aa] E 52.2
/36.8		 23
/23		 UBB_HUMAN Polyubiquitin-B
5edv[1] A RNF31_HUMAN E3 ubiquitin-protein ligase RNF31[286 aa] F 33.3
/36.8		 12
/12		 UBB_HUMAN Polyubiquitin-B
5edv[1] B RNF31_HUMAN E3 ubiquitin-protein ligase RNF31[333 aa] E 36.4
/36.8		 11
/11		 UBB_HUMAN Polyubiquitin-B
5edv[2] B RNF31_HUMAN E3 ubiquitin-protein ligase RNF31[333 aa] F 52.4
/36.8		 21
/21		 UBB_HUMAN Polyubiquitin-B
5eya[8] B Q59GW5_HUMAN Tripartite motif-containing 25 variant[76 aa] E 50.0
/36.8		 4
/4		 UBB_HUMAN Polyubiquitin-B
5fer[3] B UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1[145 aa] C 41.2
/36.8		 17
/17		 RS27A_BOVIN Ubiquitin-40S ribosomal protein S27a
5h7s[2] B LNX1_HUMAN E3 ubiquitin-protein ligase LNX[124 aa] A 33.3
/36.8		 6
/6		 UBB_HUMAN Ubiquitin-like 1
5h7s[2] E LNX1_HUMAN E3 ubiquitin-protein ligase LNX[124 aa] A 33.3
/36.8		 6
/6		 UBB_HUMAN Ubiquitin-like 1
5jtv[4] A UBP7_HUMAN UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7[564 aa] B 38.7
/36.8		 31
/31		 UBB_HUMAN Polyubiquitin-B
5jtv[4] E UBP7_HUMAN UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7[565 aa] B 66.7
/36.8		 6
/6		 UBB_HUMAN Polyubiquitin-B
5jtv[1] G UBP7_HUMAN UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7[563 aa] B 0.0
/36.8		 1
/1		 UBB_HUMAN Polyubiquitin-B
5kgf[4] G H2A1_HUMAN Histone H2A type 1[113 aa] L 100.0
/36.8		 2
/2		 UBB_HUMAN Ubiquitin
6ftx[1] C H2A1_XENLA Histone H2A type 1[103 aa] K 60.0
/36.8		 5
/5		 UBB_HUMAN Polyubiquitin-B
6ftx[1] G H2A1_XENLA Histone H2A type 1[105 aa] L 0.0
/36.8		 2
/2		 UBB_HUMAN Polyubiquitin-B
5kgf[2] N H7BZY0_HUMAN Tumor suppressor p53-binding protein 1[21 aa] L 25.0
/36.8		 4
/4		 UBB_HUMAN Ubiquitin
5knl[1] C UBC15_SCHPO Ubiquitin-conjugating enzyme E2 15[171 aa] B 50.0
/36.8		 4
/4		 A0A081CFF0_PSEA2 Ubiquitin
5knl[1] F UBC15_SCHPO Ubiquitin-conjugating enzyme E2 15[162 aa] E 0.0
/36.8		 1
/1		 A0A081CFF0_PSEA2 Ubiquitin
5kyd[4] B UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7[341 aa] A 40.7
/36.8		 27
/27		 UBB_HUMAN Polyubiquitin-B
5mn9[1] C FA63A_HUMAN Ubiquitin carboxyl-terminal hydrolase MINDY-1[19 a.. B 28.6
/36.8		 7
/7		 RS27A_BOVIN Ubiquitin-40S ribosomal protein S27a
5ohp[1] A UBP30_HUMAN UBP30_HUMAN UBP30_HUMAN Ubiquitin carboxyl-terminal hydrolase 30[315 aa] B 43.8
/36.8		 32
/32		 UBB_HUMAN Polyubiquitin-B
5tte[1] A ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1[442 aa] C 53.8
/36.8		 13
/13		 A0A1D6DHW0_WHEAT ubiquitin
5tte[1] B UB2L3_HUMAN Ubiquitin-conjugating enzyme E2 L3[151 aa] C 100.0
/36.8		 4
/4		 A0A1D6DHW0_WHEAT ubiquitin
6cp2[1] B UB2L3_HUMAN Ubiquitin-conjugating enzyme E2 L3[153 aa] C 100.0
/36.8		 2
/2		 UBB_HUMAN Polyubiquitin-B
6n13[4] C UB2L3_HUMAN Ubiquitin-conjugating enzyme E2 L3[154 aa] B 80.0
/36.8		 5
/5		 UBB_HUMAN ubiquitin
5txk[1] A UBP35_HUMAN UBP35_HUMAN Ubiquitin carboxyl-terminal hydrolase 35,Ubiquitin.. B 41.2
/36.8		 34
/34		 J3QS39_HUMAN Polyubiquitin-B
5u4p[2] B RPN11_YEAST 26S proteasome regulatory subunit RPN11[159 aa] C 50.0
/36.8		 20
/20		 RS27A_YEAST Ubiquitin-40S ribosomal protein S31
5vey[1] A H2B1J_HUMAN H2A1B_HUMAN Histone H2B type 1-J,Histone H2A type 1-B/E[186 aa.. B 66.7
/36.8		 3
/3		 UBB_HUMAN Polyubiquitin-B
5vey[1] C RN169_HUMAN E3 ubiquitin-protein ligase RNF169[59 aa] B 27.3
/36.8		 11
/11		 UBB_HUMAN Polyubiquitin-B
5vf0[1] B RAD18_HUMAN E3 ubiquitin-protein ligase RAD18[43 aa] A 50.0
/36.8		 10
/10		 UBB_HUMAN Polyubiquitin-B
5vnz[4] A TNF receptor-associated factor 6[108 aa] C 33.3
/36.8		 9
/9		 UBB_HUMAN Ubiquitin
5vnz[4] A TNF receptor-associated factor 6[108 aa] C 50.0
/36.8		 4
/4		 UBB_HUMAN Ubiquitin
5vzm[1] B REV1_HUMAN DNA repair protein REV1[111 aa] A 33.3
/36.8		 12
/12		 UBB_HUMAN Ubiquitin
5vzw[2] C TRI23_HUMAN E3 ubiquitin-protein ligase TRIM23[77 aa] B 40.0
/36.8		 5
/5		 UBB_HUMAN Ubiquitin
5vzw[2] D TRI23_HUMAN E3 ubiquitin-protein ligase TRIM23[77 aa] B 44.4
/36.8		 9
/9		 UBB_HUMAN Ubiquitin
5xbo[1] B RD23A_HUMAN UV excision repair protein RAD23 homolog A[49 aa] A 16.7
/36.8		 6
/6		 UBB_HUMAN Polyubiquitin-B
5yij[2] A Q6RCR0_LEGPN SdeA[959 aa] D 42.9
/36.8		 14
/14		 UBB_HUMAN Ubiquitin
5zbu[1] C RNF13_HUMAN E3 ubiquitin-protein ligase RNF13[74 aa] E 50.0
/36.8		 4
/4		 UBB_HUMAN Ubiquitin
5zq5[6] A Q6RCR1_LEGPN SidE[828 aa] B 50.0
/36.8		 16
/16		 UBC_HUMAN Ubiquitin
6asr[1] B REV1_HUMAN DNA repair protein REV1[39 aa] A 38.5
/36.8		 13
/13		 UBB_HUMAN Ubiquitin
6b7m[2] A Q5ZSK8_LEGPH SdeD (lpg2509)[312 aa] B 36.4
/36.8		 22
/22		 UBC_HUMAN Polyubiquitin-C
6b7o[1] A Q5ZSK8_LEGPH SdeD (lpg2509) H67A[313 aa] C 47.1
/36.8		 17
/17		 UBC_HUMAN Polyubiquitin-C
6cp2[1] A Q6RCR4_LEGPN SidC[502 aa] C 54.2
/36.8		 24
/24		 UBB_HUMAN Polyubiquitin-B
6hei[1] A UBP28_HUMAN UBP28_HUMAN Ubiquitin carboxyl-terminal hydrolase 28,Ubiquitin.. B 56.2
/36.8		 16
/17		 UBB_HUMAN Polyubiquitin-B
6hek[1] A UBP28_HUMAN Ubiquitin carboxyl-terminal hydrolase 28[453 aa] B 50.0
/36.8		 20
/21		 UBB_HUMAN Polyubiquitin-B
6isu[2] A UCHL3_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L3[2.. B 37.5
/36.8		 8
/8		 UBB_HUMAN Ubiquitin
6jma[1] K DOT1L_HUMAN Histone-lysine N-methyltransferase, H3 lysine-79 s.. L 50.0
/36.8		 12
/12		 UBB_HUMAN Ubiquitin
6n13[1] A PRKN_HUMAN E3 ubiquitin-protein ligase parkin[322 aa] B 38.9
/36.8		 18
/18		 UBB_HUMAN ubiquitin
6nya[2] C UBC3_YEAST Ubiquitin-conjugating enzyme E2-34 kDa[170 aa] B 100.0
/36.8		 1
/1		 A0A1D6RLC6_WHEAT Ubiquitin
6oa9[12] J NPL4_YEAST Nuclear protein localization protein 4[468 aa] H 40.0
/36.8		 10
/10		 RL40A_YEAST Ubiquitin
6q00[2] B TYDP2_HUMAN Tyrosyl-DNA phosphodiesterase 2[45 aa] A 40.0
/36.8		 10
/10		 UBC_HUMAN Ubiquitin
6rya[3] A A0A3A6VNK6_LEGPN Septation initiation protein[308 aa] B 40.0
/36.8		 20
/20		 UBC_HUMAN Polyubiquitin-C
6s53[8] E RO52_HUMAN E3 ubiquitin-protein ligase TRIM21[79 aa] B 36.4
/36.8		 11
/11		 UBC_HUMAN Polyubiquitin-C
6sqo[16] A MDM2_HUMAN E3 ubiquitin-protein ligase Mdm2[62 aa] C 44.4
/36.8		 9
/9		 J3QTR3_HUMAN Ubiquitin-40S ribosomal protein S27a
6sqr[1] A MDM2_FELCA E3 ubiquitin-protein ligase Mdm2[69 aa] I 0.0
/36.8		 6
/6		 UBC_HUMAN Polyubiquitin-C
6tuv[2] A MINY1_HUMAN Ubiquitin carboxyl-terminal hydrolase MINDY-1[262 .. C 70.0
/36.8		 10
/10		 UBC_HUMAN Polyubiquitin-C
6ud0[1] C TS101_HUMAN Tumor susceptibility gene 101 protein[141 aa] B 20.0
/36.8		 5
/5		 UBB_HUMAN Ubiquitin
6vae[1] A B7ZMF2_HUMAN Fanconi anemia, complementation group I[1198 aa] C 100.0
/36.8		 5
/5		 UBC_HUMAN Ubiquitin
6vae[1] A B7ZMF2_HUMAN Fanconi anemia, complementation group I[1198 aa] D 28.6
/36.8		 14
/14		 UBC_HUMAN Ubiquitin
6vae[1] B FACD2_HUMAN Fanconi anemia group D2 protein[1155 aa] C 30.8
/36.8		 13
/13		 UBC_HUMAN Ubiquitin
6vae[1] B FACD2_HUMAN Fanconi anemia group D2 protein[1155 aa] D 100.0
/36.8		 3
/3		 UBC_HUMAN Ubiquitin
6w9s[1] A B1EF49_ESCAT OTU domain-containing protein EschOTU[178 aa] B 46.2
/36.8		 13
/14		 UBC_HUMAN Ubiquitin
6wjd[3] I PSDE_HUMAN 26S proteasome non-ATPase regulatory subunit 14[28.. S 60.0
/36.8		 10
/10		 UBC_HUMAN Ubiquitin
6wtg[1] A SDEA_LEGPH Ubiquitinating/deubiquitinating enzyme SdeA[169 aa.. B 53.3
/36.8		 15
/15		 UBC_HUMAN Ubiquitin
6xa9[3] A R1AB_SARS2 Non-structural protein 3[313 aa] B 100.0
/100.0		 11
/12		 ISG15_HUMAN ISG15 CTD-propargylamide
6yva[6] A R1A_SARS2 Replicase polyprotein 1a[283 aa] B 68.0
/66.5		 25
/25		 ISG15_MOUSE Ubiquitin-like protein ISG15
7uv5[1] A R1A_SARS2 Papain-like protease nsp3[312 aa] B 57.9
/36.8		 19
/19		 UBC_HUMAN Ubiquitin
6z7v[17] B MINY2_HUMAN Ubiquitin carboxyl-terminal hydrolase MINDY-2[259 .. C 60.0
/36.8		 10
/10		 UBC_HUMAN Polyubiquitin-C
7ay1[1] B FACD2_HUMAN Fanconi anemia group D2 protein[1033 aa] C 100.0
/36.8		 1
/1		 RL40_HUMAN Ubiquitin-60S ribosomal protein L40
7ay1[1] D UBP1_HUMAN Ubiquitin carboxyl-terminal hydrolase 1[341 aa] C 35.7
/36.8		 28
/28		 RL40_HUMAN Ubiquitin-60S ribosomal protein L40
7f0u[1] B A0A0U2C377_9ALPC papain-like protease 2[217 aa] D 52.9
/36.8		 17
/17		 RS27A_BOVIN Ubiquitin
7k5j[2] K UBC3_YEAST Ubiquitin-conjugating enzyme E2-34 kDa[156 aa] A 50.0
/36.8		 16
/16		 UBIQ_WHEAT Ubiquitin
7k5j[2] C UBC3_YEAST Ubiquitin-conjugating enzyme E2-34 kDa[152 aa] N 100.0
/36.8		 3
/3		 UBIQ_WHEAT Ubiquitin
7keo[2] A Synthetic antigen binding fragment, heavy chain[22.. D 47.1
/36.8		 17
/17		 UBC_HUMAN Ubiquitin
7m4m[2] A RN216_HUMAN E3 ubiquitin-protein ligase RNF216[173 aa] C 52.2
/36.8		 23
/23		 UBC_HUMAN Ubiquitin
7m4n[3] A RN216_HUMAN E3 ubiquitin-protein ligase RNF216[120 aa] C 54.5
/36.8		 22
/22		 UBC_HUMAN Ubiquitin
7sol[2] A UBA6_HUMAN Ubiquitin-like modifier-activating enzyme 6[1011 a.. B 50.0
/36.8		 24
/24		 UBIQ_WHEAT Ubiquitin
7uv5[1] C UBB_HUMAN Ubiquitin[41 aa] B 0.0
/36.8		 1
/1		 UBC_HUMAN Ubiquitin
7w39[1] VA Substrate[10 aa] UA 100.0
/36.8		 2
/2		 UBB_HUMAN Ubiquitin
7w3a[8] JA UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14[494 aa] KA 50.0
/36.8		 28
/28		 UBB_HUMAN Ubiquitin
7w3b[2] UA UBP14_HUMAN Ubiquitin carboxyl-terminal hydrolase 14[392 aa] VA 56.0
/36.8		 25
/25		 UBB_HUMAN Ubiquitin
7zh3[2] B UBP1_HUMAN Ubiquitin carboxyl-terminal hydrolase 1[330 aa] A 38.9
/36.8		 36
/36		 RL40_HUMAN Ubiquitin-60S ribosomal protein L40
7zh4[2] B UBP1_HUMAN Ubiquitin carboxyl-terminal hydrolase 1[285 aa] A 40.0
/36.8		 35
/35		 RL40_HUMAN Ubiquitin-60S ribosomal protein L40
8a9j[2] B FACD2_HUMAN Fanconi anemia group D2 protein[960 aa] C 100.0
/36.8		 1
/1		 UBC_HUMAN Polyubiquitin-C
8c83[2] A OTU2_YEAST OTU domain-containing protein 2[259 aa] B 77.8
/36.8		 9
/9		 RS31_YEAST Ubiquitin
8cas[1] XA RS7A_YEAST 40S ribosomal protein S7-A[184 aa] RA 100.0
/36.8		 1
/1		 RL40A_YEAST 60S ribosomal protein L40-A
8dav[2] H UFD1_YEAST Ubiquitin fusion degradation protein 1[62 aa] J 66.7
/36.8		 3
/3		 UBI4P_YEAST Ubiquitin
8eaz[3] A HOIL1_HUMAN RanBP-type and C3HC4-type zinc finger-containing p.. E 43.5
/36.8		 23
/23		 UBC_HUMAN Ubiquitin
8eb0[1] A RN216_HUMAN E3 ubiquitin-protein ligase RNF216[255 aa] C 45.5
/36.8		 33
/33		 UBC_HUMAN Ubiquitin
8grm[1] I Q6IB93_HUMAN COMMD3 protein[101 aa] M 0.0
/36.8		 2
/2		 UBB_HUMAN Ubiquitin
8grm[1] J RING2_HUMAN Ring1B[101 aa] M 33.3
/36.8		 3
/3		 UBB_HUMAN Ubiquitin
8h1t[1] B H4_HUMAN Histone H4[80 aa] M 100.0
/36.8		 1
/1		 UBB_HUMAN Ubiquitin
8h1t[1] L BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1[301 aa].. M 56.2
/36.8		 16
/16		 UBB_HUMAN Ubiquitin
8h1t[1] N ASXL1_HUMAN Polycomb group protein ASXL1[109 aa] M 50.0
/36.8		 4
/4		 UBB_HUMAN Ubiquitin
3b08[6] B HOIL1_MOUSE RanBP-type and C3HC4-type zinc finger-containing p.. A 41.2
/33.3		 17
/17		 UBC_HUMAN Polyubiquitin-C
5h07[2] B TNIP2_HUMAN TNFAIP3-interacting protein 2[78 aa] A 30.0
/33.8		 10
/10		 UBC_HUMAN Polyubiquitin-C
2y5b[2] A UBP21_HUMAN UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21[315 aa] B 41.9
/33.8		 31
/32		 UBB_HUMAN UBIQUITIN
5b83[2] B OPTN_HUMAN Optineurin[59 aa] A 40.0
/33.3		 10
/11		 UBC_HUMAN tetra ubiquitin
5b83[2] C OPTN_HUMAN Optineurin[61 aa] A 100.0
/33.3		 2
/12		 UBC_HUMAN tetra ubiquitin
6n5m[12] B TNIP1_MOUSE TNFAIP3-interacting protein 1[62 aa] A 33.3
/32.0		 12
/12		 UBC_MOUSE Polyubiquitin-C
7eao[2] B TNIP1_HUMAN TNFAIP3-interacting protein 1[63 aa] A 100.0
/33.8		 2
/12		 UBC_HUMAN Polyubiquitin-C
7yui[1] B HOIL1_HUMAN RanBP-type and C3HC4-type zinc finger-containing p.. A 27.8
/33.3		 36
/63		 UBC_HUMAN Polyubiquitin-C
6njd[2] B RavD[191 aa] A 35.7
/31.9		 28
/28		 F5H747_HUMAN Di-ubiquitin
6k9p[2] A B9G207_ORYSJ Ubiquitin thioesterase[241 aa] B 45.5
/36.8		 22
/22		 UBB_HUMAN Ubiquitin
3wxe[3] A E7FEV5_DANRE E7FEV5_DANRE Uncharacterized protein[301 aa] B 29.0
/31.9		 31
/31		 UBC_HUMAN Ubiquitin
7tv4[2] A NEMO_HUMAN NF-kappa-B essential modulator[81 aa] B 27.3
/31.9		 11
/11		 UBC_HUMAN Polyubiquitin-C
7tv4[2] C NEMO_HUMAN NF-kappa-B essential modulator[79 aa] B 30.8
/31.9		 13
/13		 UBC_HUMAN Polyubiquitin-C
5wq4[2] B OPTN_MOUSE Optineurin[72 aa] A 27.3
/33.3		 11
/11		 UBC_HUMAN ubiquitin
5wq4[2] C OPTN_MOUSE Optineurin[72 aa] A 12.5
/33.3		 8
/8		 UBC_HUMAN ubiquitin
3znz[14] A F105B_HUMAN PROTEIN FAM105B[266 aa] B 25.0
/31.2		 32
/32		 F5H265_HUMAN POLYUBIQUITIN-C
2zvn[6] C NEMO_MOUSE NF-kappa-B essential modulator[85 aa] A 27.3
/31.9		 11
/11		 Q96C32_HUMAN UBC protein
2zvn[6] D NEMO_MOUSE NF-kappa-B essential modulator[85 aa] A 30.0
/31.9		 10
/10		 Q96C32_HUMAN UBC protein
3u30[2] C Heavy chain Fab[218 aa] A 22.2
/31.5		 18
/18		 UBC_HUMAN linear di-ubiquitin
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
NUCLEOTIDE
165 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7xcr[2] K DNA (146-MER) A 75.0
/36.8		 8
/8		 UBB_HUMAN Ubiquitin
7xd0[1] I DNA (146-MER) K 0.0
/36.8		 1
/1		 A0A2H6N1E9_MICLE Ubiquitin-60S ribosomal protein L40
7xct[1] K DNA (145-MER) A 83.3
/36.8		 6
/6		 UBB_HUMAN Ubiquitin
7xct[1] L DNA (145-MER) N 83.3
/36.8		 6
/6		 UBB_HUMAN Ubiquitin
7xd0[1] J DNA (146-MER) K 100.0
/36.8		 1
/1		 A0A2H6N1E9_MICLE Ubiquitin-60S ribosomal protein L40
7xd0[1] J DNA (146-MER) L 0.0
/36.8		 1
/1		 A0A2H6N1E9_MICLE Ubiquitin-60S ribosomal protein L40
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
165 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
3rt3[2] C SIN
SUCCINIC ACID[8 atoms] 		A 100.0
/99.3		 2
/2		 ISG15_HUMAN Ubiquitin-like protein ISG15
3rt3[2] D SIN
SUCCINIC ACID[8 atoms] 		A 100.0
/99.3		 7
/7		 ISG15_HUMAN Ubiquitin-like protein ISG15
4ii2[1] F ATP
ADENOSINE-5'-TRIPHOSPHATE[31 atoms] 		B 100.0
/36.8		 1
/1		 RL402_SCHPO Ubiquitin-60S ribosomal protein L40
6nya[2] G ATP
ADENOSINE-5'-TRIPHOSPHATE[31 atoms] 		B 100.0
/36.8		 1
/1		 A0A1D6RLC6_WHEAT Ubiquitin
4nnj[2] Y AMP
ADENOSINE MONOPHOSPHATE[23 atoms] 		B 100.0
/36.8		 1
/1		 UBI4P_YEAST Uba1
7sol[2] F AMP
ADENOSINE MONOPHOSPHATE[23 atoms] 		B 100.0
/36.8		 1
/1		 UBIQ_WHEAT Ubiquitin
5l6h[2] R 6O2
[(2~{R},3~{S},4~{R},5~{R})-5-[6-[(3-ethynylphenyl).. 		B 100.0
/36.8		 1
/1		 RS27A_YEAST Ubiquitin-40S ribosomal protein S31
5l6i[2] W B39
[(1S,2S,4R)-4-{4-[(1S)-2,3-dihydro-1H-inden-1-ylam.. 		B 100.0
/36.8		 1
/1		 RS27A_YEAST Ubiquitin-40S ribosomal protein S31
5l6j[4] P 61T
[(1~{R},2~{R},3~{S},4~{R})-2,3-bis(oxidanyl)-4-[[2.. 		B 100.0
/36.8		 1
/1		 RS27A_YEAST Ubiquitin-40S ribosomal protein S31
5zq7[2] E NAD
NICOTINAMIDE-ADENINE-DINUCLEOTIDE[44 atoms] 		B 100.0
/36.8		 1
/1		 UBC_HUMAN Ubiquitin
6b7o[1] D AR6
[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY.. 		B 0.0
/36.8		 2
/2		 UBC_HUMAN Polyubiquitin-C
6e2b[2] N PT7
chloro[2-(pyridin-2-yl-kappaN)phenyl-kappaC~1~](tr.. 		C 0.0
/36.8		 1
/1		 RS27A_BOVIN Ubiquitin
3b0a[1] E TAM
TRIS(HYDROXYETHYL)AMINOMETHANE[11 atoms] 		A 33.3
/33.3		 3
/3		 UBC_HUMAN Polyubiquitin-C
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
165 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1z2m[1] B OS4
OSMIUM 4+ ION[1 atoms] 		A 100.0
/99.3		 3
/3		 UCRP_HUMAN interferon, alpha-inducible protein (clone IFI-15K..
2w9n[16] B ZN
ZINC ION[1 atoms] 		A 0.0
/32.4		 1
/1		 UBIQ_HUMAN UBIQUITIN
2w9n[1] C ZN
ZINC ION[1 atoms] 		A 0.0
/32.4		 2
/2		 UBIQ_HUMAN UBIQUITIN
2w9n[1] D ZN
ZINC ION[1 atoms] 		A 0.0
/32.4		 1
/1		 UBIQ_HUMAN UBIQUITIN
2w9n[1] E ZN
ZINC ION[1 atoms] 		A 100.0
/32.4		 3
/3		 UBIQ_HUMAN UBIQUITIN
3hm3[2] E ZN
ZINC ION[1 atoms] 		A 0.0
/36.8		 1
/1		 UBIQ_HUMAN Ubiquitin
3n30[5] C ZN
ZINC ION[1 atoms] 		A 0.0
/36.8		 1
/1		 UBIQ_HUMAN Ubiquitin
3phx[1] H ZN
ZINC ION[1 atoms] 		B 100.0
/100.0		 1
/1		 ISG15_HUMAN Ubiquitin-like protein ISG15
3phx[2] P ZN
ZINC ION[1 atoms] 		B 100.0
/100.0		 1
/1		 ISG15_HUMAN Ubiquitin-like protein ISG15
4ljo[1] H ZN
ZINC ION[1 atoms] 		B 66.7
/36.8		 3
/3		 E1B9K1_BOVIN Polyubiquitin-C
5u4p[4] D ZN
ZINC ION[1 atoms] 		C 100.0
/36.8		 1
/1		 RS27A_YEAST Ubiquitin-40S ribosomal protein S31
2w9n[2] F CL
CHLORIDE ION[1 atoms] 		A 0.0
/32.4		 2
/2		 UBIQ_HUMAN UBIQUITIN
2xew[1] DA CL
CHLORIDE ION[1 atoms] 		I 0.0
/36.8		 1
/1		 UBIQ_HUMAN UBIQUITIN
5l6h[4] H CL
CHLORIDE ION[1 atoms] 		B 100.0
/36.8		 1
/1		 RS27A_YEAST Ubiquitin-40S ribosomal protein S31
3h7p[1] G CD
CADMIUM ION[1 atoms] 		B 50.0
/36.8		 2
/2		 UBIQ_HUMAN Ubiquitin
3h7p[1] H CD
CADMIUM ION[1 atoms] 		B 0.0
/36.8		 2
/2		 UBIQ_HUMAN Ubiquitin
3h7p[1] I CD
CADMIUM ION[1 atoms] 		B 50.0
/36.8		 2
/2		 UBIQ_HUMAN Ubiquitin
3n32[1] B PT
PLATINUM (II) ION[1 atoms] 		A 0.0
/36.8		 1
/1		 UBIQ_HUMAN Ubiquitin
3n32[1] C PT
PLATINUM (II) ION[1 atoms] 		A 0.0
/36.8		 1
/1		 UBIQ_HUMAN Ubiquitin
3n32[1] D PT
PLATINUM (II) ION[1 atoms] 		A 0.0
/36.8		 1
/1		 UBIQ_HUMAN Ubiquitin
4s22[1] H IOD
IODIDE ION[1 atoms] 		B 33.3
/36.8		 3
/3		 E1B9K1_BOVIN Ubiquitin
4s22[1] I IOD
IODIDE ION[1 atoms] 		B 50.0
/36.8		 2
/2		 E1B9K1_BOVIN Ubiquitin
4s22[1] K IOD
IODIDE ION[1 atoms] 		D 100.0
/36.8		 1
/1		 E1B9K1_BOVIN Ubiquitin
5j8p[1] C MG
MAGNESIUM ION[1 atoms] 		A 100.0
/36.8		 3
/3		 UBB_HUMAN ubiquitin
6njd[1] E MG
MAGNESIUM ION[1 atoms] 		A 0.0
/31.9		 2
/2		 F5H747_HUMAN Di-ubiquitin
6q01[1] E MG
MAGNESIUM ION[1 atoms] 		A 0.0
/36.8		 1
/1		 RS27A_BOVIN Ubiquitin
6q01[1] F MG
MAGNESIUM ION[1 atoms] 		A 50.0
/36.8		 2
/2		 RS27A_BOVIN Ubiquitin
6asr[1] D NI
NICKEL (II) ION[1 atoms] 		A 66.7
/36.8		 3
/3		 UBB_HUMAN Ubiquitin
6asr[1] E NI
NICKEL (II) ION[1 atoms] 		A 50.0
/36.8		 2
/2		 UBB_HUMAN Ubiquitin
6q00[2] C K
POTASSIUM ION[1 atoms] 		A 100.0
/36.8		 1
/1		 UBC_HUMAN Ubiquitin
6qml[1] DA BR
BROMIDE ION[1 atoms] 		F 33.3
/36.8		 3
/3		 UBC_HUMAN Polyubiquitin-C
6txb[1] J NA
SODIUM ION[1 atoms] 		B 0.0
/36.8		 2
/2		 UBC_HUMAN Polyubiquitin-C
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
OTHERPOLY
165 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
5j8p[2] B D-ubiquitin A 33.3
/36.8		 15
/15		 UBB_HUMAN ubiquitin
3b08[2] I alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose E 25.0
/31.9		 4
/4		 UBC_HUMAN Polyubiquitin-C
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
165 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1aar[149] B UBIQ_BOVIN DI-UBIQUITIN[76 aa] A 42.9
/36.8		 14
/14		 UBIQ_BOVIN DI-UBIQUITIN
6e2b[1] F RS27A_BOVIN Ubiquitin[76 aa] C 33.3
/36.8		 3
/3		 RS27A_BOVIN Ubiquitin
6oa9[1] G RL40A_YEAST Ubiquitin[48 aa] H 100.0
/36.8		 2
/2		 RL40A_YEAST Ubiquitin
8dau[3] I UBI4P_YEAST Ubiquitin[38 aa] J 100.0
/36.8		 1
/1		 UBI4P_YEAST Ubiquitin
4zqs[2] B UBC_HUMAN ubiquitin[149 aa] A 14.3
/32.4		 21
/21		 UBC_HUMAN ubiquitin
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
165 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
3phx[2] M NEH
ETHANAMINE[3 atoms] 		B 100.0
/100.0		 1
/1		 ISG15_HUMAN Ubiquitin-like protein ISG15
3phx[2] Q ACY
ACETIC ACID[4 atoms] 		B 100.0
/100.0		 1
/1		 ISG15_HUMAN Ubiquitin-like protein ISG15
5w8t[4] K MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] 		A 100.0
/100.0		 2
/2		 ISG15_HUMAN Ubiquitin-like protein ISG15
5w8t[1] O MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] 		C 100.0
/100.0		 4
/4		 ISG15_HUMAN Ubiquitin-like protein ISG15
6bi8[2] T PGE
TRIETHYLENE GLYCOL[10 atoms] 		C 100.0
/99.3		 4
/4		 ISG15_HUMAN Ubiquitin-like protein ISG15
3pse[1] C 4LJ
1.7.6 3-bromanylpropan-1-amine[4 atoms] 		B 100.0
/98.7		 1
/1		 ISG15_HUMAN Ubiquitin-like protein ISG15
5jze[2] E AYE
prop-2-en-1-amine[4 atoms] 		A 100.0
/64.5		 1
/1		 ISG15_MOUSE Ubiquitin-like protein ISG15
5w8t[8] E AYE
prop-2-en-1-amine[4 atoms] 		A 100.0
/100.0		 1
/1		 ISG15_HUMAN Ubiquitin-like protein ISG15
6bi8[4] I AYE
prop-2-en-1-amine[4 atoms] 		C 100.0
/99.3		 1
/1		 ISG15_HUMAN Ubiquitin-like protein ISG15
2xew[4] Z FLC
CITRATE ANION[13 atoms] 		E 50.0
/36.8		 4
/4		 UBIQ_HUMAN UBIQUITIN
5jze[2] F FLC
CITRATE ANION[13 atoms] 		A 25.0
/64.5		 4
/4		 ISG15_MOUSE Ubiquitin-like protein ISG15
7e62[1] G EPE
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACI.. 		A 50.0
/38.2		 2
/2		 RS27A_MOUSE ubiquitin
2o6v[33] J SO4
SULFATE ION[5 atoms] 		C 0.0
/36.8		 1
/1		 UBIQ_HUMAN Ubiquitin
2y5b[4] M SO4
SULFATE ION[5 atoms] 		B 50.0
/33.8		 2
/2		 UBB_HUMAN UBIQUITIN
3znz[1] F SO4
SULFATE ION[5 atoms] 		B 50.0
/31.2		 2
/2		 F5H265_HUMAN POLYUBIQUITIN-C
3znz[1] G SO4
SULFATE ION[5 atoms] 		B 0.0
/31.2		 1
/1		 F5H265_HUMAN POLYUBIQUITIN-C
4nnj[1] MA SO4
SULFATE ION[5 atoms] 		D 0.0
/36.8		 1
/1		 UBI4P_YEAST Uba1
4nnj[1] MA SO4
SULFATE ION[5 atoms] 		E 0.0
/36.8		 1
/1		 UBI4P_YEAST Uba1
5af4[3] M SO4
SULFATE ION[5 atoms] 		A 100.0
/38.2		 1
/1		 Q96C32_HUMAN UBIQUITIN
5af4[1] N SO4
SULFATE ION[5 atoms] 		C 0.0
/38.2		 2
/2		 Q96C32_HUMAN UBIQUITIN
5chf[1] K SO4
SULFATE ION[5 atoms] 		D 0.0
/65.1		 1
/1		 ISG15_MOUSE Ubiquitin-like protein ISG15
5chw[1] U SO4
SULFATE ION[5 atoms] 		D 33.3
/65.6		 3
/3		 ISG15_MOUSE Ubiquitin-like protein ISG15
2xew[32] Q EDO
1,2-ETHANEDIOL[4 atoms] 		B 33.3
/36.8		 3
/3		 UBIQ_HUMAN UBIQUITIN
2xew[1] R EDO
1,2-ETHANEDIOL[4 atoms] 		B 0.0
/36.8		 3
/3		 UBIQ_HUMAN UBIQUITIN
2xew[1] S EDO
1,2-ETHANEDIOL[4 atoms] 		B 40.0
/36.8		 5
/5		 UBIQ_HUMAN UBIQUITIN
4ii2[1] Q EDO
1,2-ETHANEDIOL[4 atoms] 		B 0.0
/36.8		 2
/2		 RL402_SCHPO Ubiquitin-60S ribosomal protein L40
4y1h[4] E EDO
1,2-ETHANEDIOL[4 atoms] 		A 66.7
/36.8		 3
/3		 RS27A_BOVIN Ubiquitin-40S ribosomal protein S27a
6nya[2] Q EDO
1,2-ETHANEDIOL[4 atoms] 		B 100.0
/36.8		 1
/1		 A0A1D6RLC6_WHEAT Ubiquitin
6q01[1] G EDO
1,2-ETHANEDIOL[4 atoms] 		A 0.0
/36.8		 1
/1		 RS27A_BOVIN Ubiquitin
3axc[6] B GOL
GLYCEROL[6 atoms] 		A 25.0
/32.4		 4
/4		 RS27A_HUMAN Ubiquitin
3ns8[4] C GOL
GLYCEROL[6 atoms] 		A 100.0
/36.8		 4
/4		 UBIQ_HUMAN Ubiquitin
3pse[1] D GOL
GLYCEROL[6 atoms] 		B 100.0
/98.7		 7
/7		 ISG15_HUMAN Ubiquitin-like protein ISG15
4m0w[1] I GOL
GLYCEROL[6 atoms] 		B 0.0
/36.8		 3
/3		 RS27A_BOVIN Ubiquitin
4s22[1] L GOL
GLYCEROL[6 atoms] 		D 33.3
/36.8		 3
/3		 E1B9K1_BOVIN Ubiquitin
4xkl[6] E GOL
GLYCEROL[6 atoms] 		A 28.6
/36.8		 7
/7		 RL40_HUMAN Ubiquitin
5chf[2] F GOL
GLYCEROL[6 atoms] 		A 66.7
/64.4		 6
/6		 ISG15_MOUSE Ubiquitin-like protein ISG15
5chf[4] G GOL
GLYCEROL[6 atoms] 		A 75.0
/64.4		 4
/4		 ISG15_MOUSE Ubiquitin-like protein ISG15
5chw[1] M GOL
GLYCEROL[6 atoms] 		A 100.0
/65.6		 4
/4		 ISG15_MOUSE Ubiquitin-like protein ISG15
5chw[1] DA GOL
GLYCEROL[6 atoms] 		G 80.0
/65.6		 5
/5		 ISG15_MOUSE Ubiquitin-like protein ISG15
6bi8[1] G GOL
GLYCEROL[6 atoms] 		C 100.0
/99.3		 1
/1		 ISG15_HUMAN Ubiquitin-like protein ISG15
6bi8[2] H GOL
GLYCEROL[6 atoms] 		C 100.0
/99.3		 1
/1		 ISG15_HUMAN Ubiquitin-like protein ISG15
6bi8[1] O GOL
GLYCEROL[6 atoms] 		D 100.0
/99.3		 2
/2		 ISG15_HUMAN Ubiquitin-like protein ISG15
6ffa[1] J GOL
GLYCEROL[6 atoms] 		B 100.0
/100.0		 5
/5		 ISG15_HUMAN Ubiquitin-like protein ISG15
7eal[1] G GOL
GLYCEROL[6 atoms] 		D 0.0
/33.8		 5
/5		 UBC_HUMAN ubiquitin
7m4m[1] Q GOL
GLYCEROL[6 atoms] 		C 16.7
/36.8		 6
/6		 UBC_HUMAN Ubiquitin
4bos[1] I NO3
NITRATE ION[4 atoms] 		C 75.0
/36.8		 4
/4		 UBC_HUMAN POLYUBIQUITIN-C
4bos[1] J NO3
NITRATE ION[4 atoms] 		C 16.7
/36.8		 6
/6		 UBC_HUMAN POLYUBIQUITIN-C
5jbv[1] C NO3
NITRATE ION[4 atoms] 		A 40.0
/36.8		 5
/5		 UBB_HUMAN Ubiquitin
5vix[1] B NO3
NITRATE ION[4 atoms] 		A 33.3
/31.2		 3
/4		 D2V6G7_NAEGR Polyubiquitin
5vix[1] C NO3
NITRATE ION[4 atoms] 		A 0.0
/31.2		 2
/2		 D2V6G7_NAEGR Polyubiquitin
5vix[1] D NO3
NITRATE ION[4 atoms] 		A 33.3
/31.2		 3
/3		 D2V6G7_NAEGR Polyubiquitin
6sqr[1] BA NO3
NITRATE ION[4 atoms] 		I 80.0
/36.8		 5
/5		 UBC_HUMAN Polyubiquitin-C
6sqr[1] Z NO3
NITRATE ION[4 atoms] 		I 0.0
/36.8		 1
/1		 UBC_HUMAN Polyubiquitin-C
4hcn[1] E PO4
PHOSPHATE ION[5 atoms] 		B 80.0
/37.7		 5
/5		 UBI4P_YEAST Polyubiquitin
5d0m[1] D PO4
PHOSPHATE ION[5 atoms] 		C 0.0
/36.8		 3
/3		 UBB_HUMAN Polyubiquitin-B
7keo[2] L PO4
PHOSPHATE ION[5 atoms] 		D 50.0
/36.8		 4
/4		 UBC_HUMAN Ubiquitin
4hcn[1] F FMT
FORMIC ACID[3 atoms] 		B 40.0
/37.7		 5
/5		 UBI4P_YEAST Polyubiquitin
6w9s[1] D FMT
FORMIC ACID[3 atoms] 		B 25.0
/36.8		 4
/4		 UBC_HUMAN Ubiquitin
6w9s[1] E FMT
FORMIC ACID[3 atoms] 		B 50.0
/36.8		 2
/2		 UBC_HUMAN Ubiquitin
4ljo[1] G IMD
IMIDAZOLE[5 atoms] 		B 25.0
/36.8		 4
/4		 E1B9K1_BOVIN Polyubiquitin-C
4xkl[1] J ACT
ACETATE ION[4 atoms] 		C 0.0
/36.8		 2
/2		 RL40_HUMAN Ubiquitin
6z7v[1] O PG4
TETRAETHYLENE GLYCOL[13 atoms] 		C 40.0
/36.8		 5
/5		 UBC_HUMAN Polyubiquitin-C
6zqh[2] I BME
BETA-MERCAPTOETHANOL[4 atoms] 		B 66.7
/36.8		 3
/3		 RS27A_YEAST Ubiquitin-40S ribosomal protein S31
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.