Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
5815 | 527 | 67 | YP_009725309.1() | |
QUERYSEQ |
AENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLI PLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIG DELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDS PCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNTFTRLQ |
527 |
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region | name | description |
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1-10 | DISORDER | predicted by DISOPRED |
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527 | |||||||
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pdb_id | a1 | identity[%]2 | description | |||
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P | 100.0 | R1AB_SARS2 Proofreading exoribonuclease | |||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
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527 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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A | R1AB_SARS2 nsp10 protein[131 aa] | B | 100.0 /100.0 |
50 /50 |
R1AB_SARS2 nsp14-ExoN protein |
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A | R1AB_SARS2 RNA-directed RNA polymerase[926 aa] | H | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Proofreading exoribonuclease |
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I | R1AB_SARS2 RNA-directed RNA polymerase[926 aa] | H | 100.0 /100.0 |
17 /17 |
R1AB_SARS2 Proofreading exoribonuclease |
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F | R1AB_SARS2 Non-structural protein 9[113 aa] | H | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease |
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M | R1AB_SARS2 Helicase[588 aa] | H | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease |
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D | R1AB_SARS2 Non-structural protein 8[186 aa] | P | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Proofreading exoribonuclease |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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527 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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C | RNA (5'-R(*AP*UP*GP*UP*GP*AP*UP*UP*UP*UP*AP*AP*UP*.. | B | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease |
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D | RNA (5'-R(*AP*GP*AP*AP*GP*CP*UP*AP*UP*UP*AP*AP*AP*.. | B | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Proofreading exoribonuclease |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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527 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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B |
LF6
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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B |
T6J
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
O2M
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
NVD
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
B0V
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
B0V
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
O2A
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LFO
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LGR
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LHR
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
LHR
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
WNV
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
60P
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
60P
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
W0G
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
JGD
|
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
O0S
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LJR
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
LJR
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LJK
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
U1V
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LJ6
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
JGA
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
JGA
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LJA
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
LJA
|
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
NZJ
|
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LLU
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LL0
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
LL0
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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I |
LL0
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LKU
|
A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LKL
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LK6
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
WN1
|
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LUY
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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G |
JJM
|
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
UWY
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
ELQ
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LO6
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
SZE
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LNS
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
UX1
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
UX1
|
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
EJQ
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
U0V
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
U0V
|
A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LMW
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
LMW
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LM6
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LQP
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LQI
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
WH1
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LQ3
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
LQ3
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
GT4
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
AWD
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
S5J
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
K1A
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LPU
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
WKA
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
VZS
|
A | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
NZD
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LRR
|
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LRF
|
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
LRF
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
WKS
|
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
I8D
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
K1S
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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H |
K1S
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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G |
LR9
|
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
7ZC
|
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
LQV
|
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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B |
GTG
|
A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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527 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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E |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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F |
ZN
|
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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G |
ZN
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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E |
ZN
|
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 nsp14-ExoN protein |
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F |
ZN
|
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 nsp14-ExoN protein |
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DA |
ZN
|
H | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease |
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EA |
ZN
|
H | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease |
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FA |
ZN
|
H | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease |
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G |
MG
|
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 nsp14-ExoN protein |
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GA |
MG
|
H | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease |
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HA |
MG
|
H | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease |
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G |
CA
|
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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527 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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C |
PO4
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
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D |
PO4
|
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |