Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
2612 | 500 | 9 | YP_009725300.1() | |
QUERYSEQ |
KIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSAC VLAAECTIFKDASGKPVPYCYDTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYY FMRFRRAFGEYSHVVAFNTLLFLMSFTVLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNK YKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQPPQTSITSAVLQ |
500 |
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region | name | description |
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1-500 | DISORDER | predicted by DISOPRED |
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500 | |||||||
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pdb_id | a1 | identity[%]2 | description | |||
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B | 61.4 | Q9J3E9_9BETC RNA-directed RNA polymerase | |||
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A | 61.4 | Q9J3E9_9BETC RNA-directed RNA polymerase | |||
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B | 61.9 | Q9J3E9_9BETC RNA-directed RNA polymerase | |||
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A | 64.1 | Q9J3E9_9BETC RNA-directed RNA polymerase | |||
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A | 40.4 | R1AB_FIPV Replicase polyprotein 1ab | |||
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C | 41.1 | R1AB_FIPV Replicase polyprotein 1ab | |||
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D | 41.1 | R1AB_FIPV Replicase polyprotein 1ab | |||
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B | 40.7 | R1AB_FIPV Replicase polyprotein 1ab | |||
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E | 41.2 | R1AB_FIPV Replicase polyprotein 1ab | |||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
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500 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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B | Q9J3E9_9BETC RNA-directed RNA polymerase[85 aa] | A | 75.0 /64.1 |
4 /4 |
Q9J3E9_9BETC RNA-directed RNA polymerase |
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A | Q9J3E9_9BETC RNA-directed RNA polymerase[81 aa] | B | 75.0 /61.9 |
4 /4 |
Q9J3E9_9BETC RNA-directed RNA polymerase |
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B | Q9J3E9_9BETC RNA-directed RNA polymerase[89 aa] | A | 60.9 /61.4 |
23 /23 |
Q9J3E9_9BETC RNA-directed RNA polymerase |
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A | Q9J3E9_9BETC RNA-directed RNA polymerase[89 aa] | B | 59.1 /61.4 |
22 /22 |
Q9J3E9_9BETC RNA-directed RNA polymerase |
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C | R1AB_FIPV Replicase polyprotein 1ab[92 aa] | A | 37.5 /40.4 |
16 /16 |
R1AB_FIPV Replicase polyprotein 1ab |
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D | R1AB_FIPV Replicase polyprotein 1ab[91 aa] | B | 40.0 /40.7 |
15 /15 |
R1AB_FIPV Replicase polyprotein 1ab |
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A | R1AB_FIPV Replicase polyprotein 1ab[96 aa] | C | 47.6 /41.1 |
21 /21 |
R1AB_FIPV Replicase polyprotein 1ab |
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B | R1AB_FIPV Replicase polyprotein 1ab[93 aa] | D | 50.0 /41.1 |
20 /20 |
R1AB_FIPV Replicase polyprotein 1ab |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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500 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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F |
SO4
|
C | 50.0 /41.1 |
4 /4 |
R1AB_FIPV Replicase polyprotein 1ab |
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G |
SO4
|
D | 50.0 /41.1 |
4 /4 |
R1AB_FIPV Replicase polyprotein 1ab |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |