Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
19863 | 527 | 92 | YP_009725309.1() | |
QUERYSEQ |
AENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDIPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLI PLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIG DELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDS PCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNTFTRLQ |
527 | region | name | description |
1-10 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
527 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
7egq | P | 100.0 | R1AB_SARS2 Proofreading exoribonuclease | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
527 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7eiz[1] | A | R1AB_SARS2 RNA-directed RNA polymerase[926 aa] | I | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease | |
7eiz[1] | E | R1AB_SARS2 Non-structural protein 9[113 aa] | I | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease | |
5c8s[14] | A | R1AB_CVHSA Non-structural protein 10[133 aa] | B | 98.0 /94.9 |
49 /49 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
527 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7qif[1] | B |
GTG
7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE[52.. |
A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
5c8s[4] | K |
SAH
S-ADENOSYL-L-HOMOCYSTEINE[26 atoms] |
B | 100.0 /94.9 |
14 /14 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
7tw8[1] | B |
SAH
S-ADENOSYL-L-HOMOCYSTEINE[26 atoms] |
A | 100.0 /98.9 |
13 /13 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Proofreading exoribonucl.. | |
8frj[1] | C |
AW2
5-bromo-7-{5-[(3-{[(4-tert-butylphenyl)carbamoyl]a.. |
A | 100.0 /98.9 |
16 /16 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Guanine-N7 methyltransfe.. | |
5c8t[2] | K |
SAM
S-ADENOSYLMETHIONINE[27 atoms] |
B | 100.0 /94.9 |
13 /13 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
7tw7[1] | C |
SAM
S-ADENOSYLMETHIONINE[27 atoms] |
A | 100.0 /98.9 |
13 /13 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Proofreading exoribonucl.. | |
7tw9[1] | B |
SFG
SINEFUNGIN[27 atoms] |
A | 100.0 /98.9 |
13 /13 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Proofreading exoribonucl.. | |
8frk[1] | D |
MJ7
5'-S-(4-{[(4'-chloro[1,1'-biphenyl]-3-yl)methyl]am.. |
A | 100.0 /98.9 |
14 /14 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Guanine-N7 methyltransfe.. | |
8bwu[1] | B |
6NR
(2~{S})-2-azanyl-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(.. |
A | 100.0 /97.4 |
13 /13 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Proofreading exoribonucl.. | |
5c8s[2] | L |
G3A
GUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE[50 atoms.. |
B | 100.0 /94.9 |
16 /16 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
METAL | |||||||
527 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7mc5[1] | V |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /99.7 |
1 /1 |
R1AB_SARS2 Proofreading exoribonuclease | |
5c8s[2] | J |
MG
MAGNESIUM ION[1 atoms] |
B | 100.0 /94.9 |
3 /3 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
5c8t[4] | J |
MG
MAGNESIUM ION[1 atoms] |
B | 100.0 /94.9 |
3 /3 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
7diy[1] | G |
MG
MAGNESIUM ION[1 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 nsp14-ExoN protein | |
7eiz[1] | S |
MG
MAGNESIUM ION[1 atoms] |
I | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc6[1] | M |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /99.6 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease | |
5c8s[5] | G |
ZN
ZINC ION[1 atoms] |
B | 100.0 /94.9 |
4 /4 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
5c8s[5] | H |
ZN
ZINC ION[1 atoms] |
B | 100.0 /94.9 |
4 /4 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
5c8s[5] | I |
ZN
ZINC ION[1 atoms] |
B | 100.0 /94.9 |
4 /4 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
5c8t[5] | G |
ZN
ZINC ION[1 atoms] |
B | 100.0 /94.9 |
4 /4 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
5c8t[5] | H |
ZN
ZINC ION[1 atoms] |
B | 100.0 /94.9 |
4 /4 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
5c8t[4] | I |
ZN
ZINC ION[1 atoms] |
B | 100.0 /94.9 |
4 /4 |
R1AB_CVHSA Guanine-N7 methyltransferase | |
5nfy[4] | I |
ZN
ZINC ION[1 atoms] |
A | 100.0 /94.7 |
5 /5 |
Q1T6X8_CVHSA Polyprotein 1ab | |
5nfy[4] | J |
ZN
ZINC ION[1 atoms] |
A | 100.0 /94.7 |
4 /4 |
Q1T6X8_CVHSA Polyprotein 1ab | |
5nfy[4] | K |
ZN
ZINC ION[1 atoms] |
A | 100.0 /94.7 |
5 /5 |
Q1T6X8_CVHSA Polyprotein 1ab | |
7diy[2] | E |
ZN
ZINC ION[1 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 nsp14-ExoN protein | |
7diy[7] | F |
ZN
ZINC ION[1 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 nsp14-ExoN protein | |
7mc5[1] | D |
ZN
ZINC ION[1 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease | |
7qgi[2] | B |
ZN
ZINC ION[1 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
7qgi[2] | C |
ZN
ZINC ION[1 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
7qgi[2] | D |
ZN
ZINC ION[1 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
7r2v[1] | I |
ZN
ZINC ION[1 atoms] |
A | 100.0 /99.5 |
2 /2 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
7r2v[2] | J |
ZN
ZINC ION[1 atoms] |
A | 100.0 /99.5 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
8frk[1] | E |
K
POTASSIUM ION[1 atoms] |
A | 100.0 /98.9 |
4 /4 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Guanine-N7 methyltransfe.. | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
527 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7qgi[2] | E |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
7qgi[2] | F |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
7mc5[1] | P |
TLA
L(+)-TARTARIC ACID[10 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | Q |
TLA
L(+)-TARTARIC ACID[10 atoms] |
A | 100.0 /99.7 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | AA |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
1 /1 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | DA |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[4] | E |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
6 /6 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | H |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | I |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | J |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | K |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | L |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | M |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[2] | N |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | O |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | R |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[2] | T |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | U |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc5[1] | W |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc6[1] | E |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.6 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc6[1] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.6 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc6[1] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.6 |
5 /5 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc6[1] | K |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.6 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease | |
7mc6[1] | P |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /99.6 |
1 /1 |
R1AB_SARS2 Proofreading exoribonuclease | |
7r2v[1] | E |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
A | 100.0 /99.5 |
2 /2 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
5nfy[2] | L |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /94.7 |
2 /2 |
Q1T6X8_CVHSA Polyprotein 1ab | |
7r2v[2] | D |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /99.5 |
4 /4 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
7r2v[1] | K |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
B | 100.0 /99.5 |
3 /3 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
7r2v[1] | N |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
B | 100.0 /99.5 |
1 /1 |
R1AB_SARS2 Proofreading exoribonuclease nsp14 | |
7tw9[1] | D |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /98.9 |
6 /6 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Proofreading exoribonucl.. | |
7tw9[1] | E |
EOH
ETHANOL[3 atoms] |
A | 100.0 /98.9 |
4 /4 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Proofreading exoribonucl.. | |
7tw9[2] | F |
MOH
METHANOL[2 atoms] |
A | 100.0 /98.9 |
3 /3 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Proofreading exoribonucl.. | |
7tw9[1] | I |
MOH
METHANOL[2 atoms] |
A | 100.0 /98.9 |
4 /4 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Proofreading exoribonucl.. | |
7tw9[1] | J |
MOH
METHANOL[2 atoms] |
A | 100.0 /98.9 |
4 /4 |
ETV6_HUMAN R1AB_SARS2 Transcription factor ETV6,Proofreading exoribonucl.. | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |