Contact Molecules for Homologous Proteins

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[SupCon3D]
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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
13274 275 10 P0DTC3(AP3A_SARS2) RecName: Full=ORF3a protein; Short=ORF3a;AltName: Full=Accessory protein 3a;AltName: Full=Protein 3a;AltName: Full=Protein U274;AltName: Full=Protein X1;
QUERYSEQ 
MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPLLYDANYFLCWH
TNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P0DTC3(AP3A_SARS2)]

275
region name description
1-275 CHAIN /note="ORF3a protein" /id="PRO_0000449650"
1-42 TOPO_DOM /note="Extracellular"
43-61 TRANSMEM /note="Helical"
62-67 TOPO_DOM /note="Cytoplasmic"
68-93 TRANSMEM /note="Helical"
94-101 TOPO_DOM /note="Extracellular"
102-126 TRANSMEM /note="Helical"
127-275 TOPO_DOM /note="Cytoplasmic"
33-141 DOMAIN /note="CoV 3a-like viroporin TM"
145-237 DOMAIN /note="CoV 3a-like viroporin CD"
1-39 REGION /note="Disordered"
239-275 REGION /note="Disordered"
1-275 DISORDER predicted by DISOPRED

MONOMER
275
pdb_id a1 identity[%]2 description
7kjr B 100.0