Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
3177461 180 47 Q10589(BST2_HUMAN) RecName: Full=Bone marrow stromal antigen 2; Short=BST-2;AltName: Full=HM1.24 antigen;AltName: Full=Tetherin;AltName: CD_antigen=CD317;Flags: Precursor;
QUERYSEQ
MASTSYDYCRVPMEDGDKRCKLLLGIGILVLLIIVILGVPLIIFTIKANSEACRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD
KKYYPSSQDSSSAAAPQLLIVLLGLSALLQ
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [Q10589(BST2_HUMAN)]

180
region name description
1-161 CHAIN /note="Bone marrow stromal antigen 2" /id="PRO_0000065005"
162-180 PROPEP /note="Removed in mature form" /id="PRO_0000253552"
1-20 TOPO_DOM /note="Cytoplasmic"
21-48 TRANSMEM /note="Helical; Signal-anchor for type II membrane protein"
49-161 TOPO_DOM /note="Extracellular"
68-152 COILED
161-161 LIPID /note="GPI-anchor amidated serine"
1-163 DISORDER predicted by DISOPRED

MONOMER
180
pdb_id a1 identity[%]2 description
3mqb A 100.0 BST2_HUMAN Bone marrow stromal antigen 2
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
COMPOUND
180 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2xg7[2] C NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
A 100.0
/100.0
3
/3
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2xg7[2] D NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
A 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
180 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2x7a[1] M CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[1] M CL
CHLORIDE ION[1 atoms]
B 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[1] O CL
CHLORIDE ION[1 atoms]
E 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[1] Q CL
CHLORIDE ION[1 atoms]
F 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[1] T CL
CHLORIDE ION[1 atoms]
G 100.0
/100.0
3
/3
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[1] W CL
CHLORIDE ION[1 atoms]
H 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[1] AA CL
CHLORIDE ION[1 atoms]
I 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[3] L NA
SODIUM ION[1 atoms]
B 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[1] P NA
SODIUM ION[1 atoms]
E 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[1] U NA
SODIUM ION[1 atoms]
G 100.0
/100.0
2
/2
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[1] Z NA
SODIUM ION[1 atoms]
I 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2x7a[2] X MG
MAGNESIUM ION[1 atoms]
I 100.0
/100.0
2
/2
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
3mq7[4] M CA
CALCIUM ION[1 atoms]
E 100.0
/97.0
2
/2
BST2_HUMAN Bone marrow stromal antigen 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
180 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2x7a[12] B BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2[59 aa] A 100.0
/100.0
25
/25
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
2xg7[2] B BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2[75 aa] A 100.0
/100.0
36
/36
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
3mq7[38] B BST2_HUMAN Bone marrow stromal antigen 2[99 aa] A 93.3
/97.0
30
/30
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[104] C BST2_HUMAN Bone marrow stromal antigen 2[99 aa] A 81.2
/97.0
16
/16
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[3] G BST2_HUMAN Bone marrow stromal antigen 2[99 aa] A 100.0
/97.0
1
/1
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[2] J BST2_HUMAN Bone marrow stromal antigen 2[99 aa] A 100.0
/97.0
1
/1
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[6] L BST2_HUMAN Bone marrow stromal antigen 2[99 aa] A 85.7
/97.0
7
/7
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[2] L BST2_HUMAN Bone marrow stromal antigen 2[99 aa] D 100.0
/97.0
1
/1
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[2] K BST2_HUMAN Bone marrow stromal antigen 2[99 aa] H 100.0
/97.0
1
/1
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[1] L BST2_HUMAN Bone marrow stromal antigen 2[99 aa] H 100.0
/97.0
7
/7
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[1] H BST2_HUMAN Bone marrow stromal antigen 2[99 aa] K 100.0
/97.0
1
/1
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[1] D BST2_HUMAN Bone marrow stromal antigen 2[99 aa] L 100.0
/97.0
1
/1
BST2_HUMAN Bone marrow stromal antigen 2
3mq7[1] H BST2_HUMAN Bone marrow stromal antigen 2[99 aa] L 100.0
/97.0
7
/7
BST2_HUMAN Bone marrow stromal antigen 2
3mqb[3] C BST2_HUMAN Bone marrow stromal antigen 2[106 aa] A 100.0
/100.0
10
/10
BST2_HUMAN Bone marrow stromal antigen 2
3mq9[8] B MALE_ECOLI BST2_HUMAN Bone marrow stromal antigen 2 fused to Maltose-bin.. A 79.3
/96.6
29
/46
MALE_ECOLI BST2_HUMAN Bone marrow stromal antigen 2 fused to Maltose-bin..
3mq9[8] C MALE_ECOLI BST2_HUMAN Bone marrow stromal antigen 2 fused to Maltose-bin.. A 88.9
/96.6
18
/27
MALE_ECOLI BST2_HUMAN Bone marrow stromal antigen 2 fused to Maltose-bin..
3mq9[8] D MALE_ECOLI BST2_HUMAN Bone marrow stromal antigen 2 fused to Maltose-bin.. A 96.3
/96.6
27
/27
MALE_ECOLI BST2_HUMAN Bone marrow stromal antigen 2 fused to Maltose-bin..
3ni0[2] B BST2_MOUSE Bone marrow stromal antigen 2[87 aa] A 62.9
/51.3
35
/37
BST2_MOUSE Bone marrow stromal antigen 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
180 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2x7a[1] R GOL
GLYCEROL[6 atoms]
G 100.0
/100.0
1
/1
BST2_HUMAN BONE MARROW STROMAL ANTIGEN 2
3ni0[1] C IPA
ISOPROPYL ALCOHOL[4 atoms]
A 0.0
/51.3
3
/3
BST2_MOUSE Bone marrow stromal antigen 2
3ni0[1] C IPA
ISOPROPYL ALCOHOL[4 atoms]
B 100.0
/50.6
1
/1
BST2_MOUSE Bone marrow stromal antigen 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.