Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
2676554 163 19 Q96PD4(IL17F_HUMAN) RecName: Full=Interleukin-17F; Short=IL-17F;AltName: Full=Cytokine ML-1;Flags: Precursor;
QUERYSEQ
MTVKTLHGPAMVKYLLLSILGLAFLSEAAARKIPKVGHTFFQKPESCPPVPGGSMKLDIGIINENQRVSMSRNIESRSTSPWNYTVTWDPNRYPSEVVQAQCRNLGCINAQGKEDISMNSVPIQQETLVVRRKHQGCSVSFQLEKVLVTV
GCTCVTPVIHHVQ
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [Q96PD4(IL17F_HUMAN)]

163
region name description
1-30 SIGNAL
31-163 CHAIN /note="Interleukin-17F" /id="PRO_0000015432"
1-163 DISORDER predicted by DISOPRED

MONOMER
163
pdb_id a1 identity[%]2 description
6hgo C 100.0 IL17F_HUMAN Interleukin-17F
6hgo A 100.0 IL17F_HUMAN Interleukin-17F
6hgo B 100.0 IL17F_HUMAN Interleukin-17F
1jpy B 100.0 interleukin 17F
1jpy A 100.0 interleukin 17F
6hgo D 100.0 IL17F_HUMAN Interleukin-17F
5n92 B 100.0 IL17F_HUMAN Interleukin-17F
1jpy D 100.0 interleukin 17F
1jpy C 100.0 interleukin 17F
6ppg F 100.0 IL17F_HUMAN Interleukin-17F
5nan F 100.0 IL17F_HUMAN Interleukin-17F
5nan E 100.0 IL17F_HUMAN Interleukin-17F
6hg9 A 100.0 IL17F_HUMAN Interleukin-17F
6ppg A 100.0 IL17F_HUMAN Interleukin-17F
3jvf B 100.0 IL17F_HUMAN Interleukin-17F
6hg4 A 100.0 IL17F_HUMAN Interleukin-17F
3jvf A 100.0 IL17F_HUMAN Interleukin-17F
8ruu F 100.0 IL17F_HUMAN Interleukin-17F
8ruu C 100.0 IL17F_HUMAN Interleukin-17F
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
163 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
3jvf C I17RA_HUMAN Interleukin-17 receptor A[271 aa] A 100.0
/100.0
16
/16
IL17F_HUMAN Interleukin-17F
3jvf C I17RA_HUMAN Interleukin-17 receptor A[271 aa] B 100.0
/100.0
25
/25
IL17F_HUMAN Interleukin-17F
5nan C I17RA_HUMAN Interleukin-17 receptor A[271 aa] E 100.0
/100.0
28
/28
IL17F_HUMAN Interleukin-17F
5nan B I17RA_HUMAN Interleukin-17 receptor A[271 aa] F 100.0
/100.0
27
/27
IL17F_HUMAN Interleukin-17F
5n92 A IL17_HUMAN Interleukin-17A[109 aa] B 100.0
/100.0
58
/58
IL17F_HUMAN Interleukin-17F
5nan D IL17_HUMAN Interleukin-17A[104 aa] E 100.0
/100.0
50
/50
IL17F_HUMAN Interleukin-17F
5nan A IL17_HUMAN Interleukin-17A[100 aa] F 100.0
/100.0
46
/46
IL17F_HUMAN Interleukin-17F
6hg4 B I17RC_HUMAN Interleukin-17 receptor C[427 aa] A 100.0
/100.0
21
/21
IL17F_HUMAN Interleukin-17F
6hg4 B I17RC_HUMAN Interleukin-17 receptor C[427 aa] A 100.0
/100.0
16
/16
IL17F_HUMAN Interleukin-17F
6hg4 B I17RC_HUMAN Interleukin-17 receptor C[427 aa] A 100.0
/100.0
16
/16
IL17F_HUMAN Interleukin-17F
6hg4 B I17RC_HUMAN Interleukin-17 receptor C[427 aa] A 100.0
/100.0
21
/21
IL17F_HUMAN Interleukin-17F
6hg9 B I17RC_HUMAN Interleukin-17 receptor C[423 aa] A 100.0
/100.0
18
/18
IL17F_HUMAN Interleukin-17F
6hg9 B I17RC_HUMAN Interleukin-17 receptor C[423 aa] A 100.0
/100.0
16
/16
IL17F_HUMAN Interleukin-17F
6hg9 B I17RC_HUMAN Interleukin-17 receptor C[423 aa] A 100.0
/100.0
16
/16
IL17F_HUMAN Interleukin-17F
6hg9 B I17RC_HUMAN Interleukin-17 receptor C[423 aa] A 100.0
/100.0
18
/18
IL17F_HUMAN Interleukin-17F
6ppg B Fab MCAF5352A light chain[212 aa] A 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
6ppg E Fab MCAF5352A light chain[216 aa] A 100.0
/100.0
7
/7
IL17F_HUMAN Interleukin-17F
6ppg B Fab MCAF5352A light chain[212 aa] F 100.0
/100.0
6
/6
IL17F_HUMAN Interleukin-17F
6ppg E Fab MCAF5352A light chain[216 aa] F 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
6ppg C Fab MCAF5352A heavy chain[223 aa] A 100.0
/100.0
3
/3
IL17F_HUMAN Interleukin-17F
6ppg D Fab MCAF5352A heavy chain[226 aa] A 100.0
/100.0
7
/7
IL17F_HUMAN Interleukin-17F
6ppg C Fab MCAF5352A heavy chain[223 aa] F 100.0
/100.0
9
/9
IL17F_HUMAN Interleukin-17F
6ppg D Fab MCAF5352A heavy chain[226 aa] F 100.0
/100.0
3
/3
IL17F_HUMAN Interleukin-17F
8ruu A Immunoblobulin heavy chain[219 aa] C 100.0
/100.0
11
/11
IL17F_HUMAN Interleukin-17F
8ruu D Immunoblobulin heavy chain[220 aa] F 100.0
/100.0
11
/11
IL17F_HUMAN Interleukin-17F
8ruu B Immunoblobulin light chain[213 aa] C 100.0
/100.0
11
/11
IL17F_HUMAN Interleukin-17F
8ruu E Immunoblobulin light chain[213 aa] C 100.0
/100.0
6
/6
IL17F_HUMAN Interleukin-17F
8ruu B Immunoblobulin light chain[213 aa] F 100.0
/100.0
4
/4
IL17F_HUMAN Interleukin-17F
8ruu E Immunoblobulin light chain[213 aa] F 100.0
/100.0
13
/13
IL17F_HUMAN Interleukin-17F
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
163 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1jpy G NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
A 100.0
/100.0
2
/2
interleukin 17F
1jpy I NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
D 100.0
/100.0
2
/2
interleukin 17F
5nan L NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
E 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
6hgo F NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
A 100.0
/100.0
3
/3
IL17F_HUMAN Interleukin-17F
6hgo G NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
C 100.0
/100.0
2
/2
IL17F_HUMAN Interleukin-17F
6hgo H NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
D 100.0
/100.0
3
/3
IL17F_HUMAN Interleukin-17F
6ppg G NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
A 100.0
/100.0
2
/2
IL17F_HUMAN Interleukin-17F
6ppg CB NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
F 100.0
/100.0
2
/2
IL17F_HUMAN Interleukin-17F
8ruu H NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms]..
F 100.0
/100.0
3
/3
IL17F_HUMAN Interleukin-17F
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
163 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
3jvf E CA
CALCIUM ION[1 atoms]
B 100.0
/100.0
2
/2
IL17F_HUMAN Interleukin-17F
6ppg H CD
CADMIUM ION[1 atoms]
A 100.0
/100.0
2
/2
IL17F_HUMAN Interleukin-17F
6ppg I CD
CADMIUM ION[1 atoms]
A 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
6ppg J CD
CADMIUM ION[1 atoms]
A 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
6ppg K CD
CADMIUM ION[1 atoms]
A 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
6ppg L CD
CADMIUM ION[1 atoms]
A 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
6ppg DB CD
CADMIUM ION[1 atoms]
F 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
6ppg EB CD
CADMIUM ION[1 atoms]
F 100.0
/100.0
2
/2
IL17F_HUMAN Interleukin-17F
6ppg FB CD
CADMIUM ION[1 atoms]
F 100.0
/100.0
2
/2
IL17F_HUMAN Interleukin-17F
6ppg HB CD
CADMIUM ION[1 atoms]
F 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
6ppg IB CD
CADMIUM ION[1 atoms]
F 100.0
/100.0
1
/1
IL17F_HUMAN Interleukin-17F
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
OTHERPOLY
163 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1jpy E 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-.. B 100.0
/100.0
2
/2
interleukin 17F
1jpy F 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. C 100.0
/100.0
3
/3
interleukin 17F
3jvf D 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/100.0
3
/3
IL17F_HUMAN Interleukin-17F
6hgo E 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 100.0
/100.0
3
/3
IL17F_HUMAN Interleukin-17F
5n92 C 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. B 100.0
/100.0
3
/3
IL17F_HUMAN Interleukin-17F
5nan G 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[be.. F 100.0
/100.0
2
/2
IL17F_HUMAN Interleukin-17F
8ruu G alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. C 100.0
/100.0
4
/4
IL17F_HUMAN Interleukin-17F
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
163 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1jpy B interleukin 17F[121 aa] A 100.0
/100.0
64
/64
interleukin 17F
1jpy A interleukin 17F[121 aa] B 100.0
/100.0
64
/64
interleukin 17F
1jpy D interleukin 17F[120 aa] C 100.0
/100.0
66
/66
interleukin 17F
1jpy C interleukin 17F[117 aa] D 100.0
/100.0
64
/64
interleukin 17F
3jvf B IL17F_HUMAN Interleukin-17F[104 aa] A 100.0
/100.0
38
/38
IL17F_HUMAN Interleukin-17F
3jvf A IL17F_HUMAN Interleukin-17F[104 aa] B 100.0
/100.0
40
/40
IL17F_HUMAN Interleukin-17F
6hg4 A IL17F_HUMAN Interleukin-17F[104 aa] A 100.0
/100.0
45
/45
IL17F_HUMAN Interleukin-17F
6hg4 A IL17F_HUMAN Interleukin-17F[104 aa] A 100.0
/100.0
45
/45
IL17F_HUMAN Interleukin-17F
6hg9 A IL17F_HUMAN Interleukin-17F[109 aa] A 100.0
/100.0
40
/40
IL17F_HUMAN Interleukin-17F
6hg9 A IL17F_HUMAN Interleukin-17F[109 aa] A 100.0
/100.0
40
/40
IL17F_HUMAN Interleukin-17F
6hgo B IL17F_HUMAN Interleukin-17F[122 aa] A 100.0
/100.0
65
/65
IL17F_HUMAN Interleukin-17F
6hgo A IL17F_HUMAN Interleukin-17F[126 aa] B 100.0
/100.0
65
/65
IL17F_HUMAN Interleukin-17F
6hgo D IL17F_HUMAN Interleukin-17F[121 aa] C 100.0
/100.0
66
/66
IL17F_HUMAN Interleukin-17F
6hgo C IL17F_HUMAN Interleukin-17F[127 aa] D 100.0
/100.0
65
/65
IL17F_HUMAN Interleukin-17F
6ppg F IL17F_HUMAN Interleukin-17F[117 aa] A 100.0
/100.0
55
/55
IL17F_HUMAN Interleukin-17F
6ppg A IL17F_HUMAN Interleukin-17F[109 aa] F 100.0
/100.0
51
/51
IL17F_HUMAN Interleukin-17F
8ruu F IL17F_HUMAN Interleukin-17F[102 aa] C 100.0
/100.0
41
/41
IL17F_HUMAN Interleukin-17F
8ruu C IL17F_HUMAN Interleukin-17F[97 aa] F 100.0
/100.0
41
/41
IL17F_HUMAN Interleukin-17F
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
163 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1jpy H SO4
SULFATE ION[5 atoms]
C 100.0
/100.0
2
/2
interleukin 17F
6hgo I SO4
SULFATE ION[5 atoms]
D 100.0
/100.0
3
/3
IL17F_HUMAN Interleukin-17F
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.