Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
1509164 | 275 | 12 | P0DTC3(AP3A_SARS2) | RecName: Full=ORF3a protein; Short=ORF3a;AltName: Full=Accessory protein 3a;AltName: Full=Protein 3a;AltName: Full=Protein U274;AltName: Full=Protein X1; |
QUERYSEQ |
MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPLLYDANYFLCWH TNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL |
275 |
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region | name | description |
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1-275 | CHAIN | /note="ORF3a protein" /id="PRO_0000449650" |
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1-42 | TOPO_DOM | /note="Extracellular" |
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43-61 | TRANSMEM | /note="Helical" |
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62-67 | TOPO_DOM | /note="Cytoplasmic" |
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68-93 | TRANSMEM | /note="Helical" |
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94-101 | TOPO_DOM | /note="Extracellular" |
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102-126 | TRANSMEM | /note="Helical" |
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127-275 | TOPO_DOM | /note="Cytoplasmic" |
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33-141 | DOMAIN | /note="CoV 3a-like viroporin TM" |
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145-237 | DOMAIN | /note="CoV 3a-like viroporin CD" |
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1-39 | REGION | /note="Disordered" |
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239-275 | REGION | /note="Disordered" |
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1-275 | DISORDER | predicted by DISOPRED |
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275 | |||||||
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pdb_id | a1 | identity[%]2 | description | |||
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B | 100.0 | AP3A_SARS2 ORF3a protein | |||
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A | 100.0 | AP3A_SARS2 ORF3a protein | |||
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B | 100.0 | AP3A_SARS2 ORF3a protein | |||
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A | 100.0 | AP3A_SARS2 ORF3a protein | |||
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B | 100.0 |