Protein Model on 7y9b_B_1_A_1
(TEMPLATE: 
7y9b
)Protein Model on 7y9b_B_1_A_1
(TEMPLATE: 7y9b
)| CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(VME1_SARS2) | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Membrane protein :VME1_BCHK5 | |
| 2 | b | A 1 (A) | polymer(polypeptide(L)) [187 aa] | Membrane protein :VME1_BCHK5 | 18E(K) 19Q(D) 20W 21N 22L(F) 24I(W) 25G(S) 28F 29L 31W(I) 32I(T) 33C(I) 35L 36Q 37F(Y) 39Y 41N(S) 42R 50K 54L 57L 58W 61T(S) 64C(L) 67L(F) 68A(C) 71Y 72R(P) 73I 77T(I) 78G(S) 81A(L) 85A(S) 91M 95Y 98A(Q) 114P 115E 117N 131R 134L(V) 135E 137E(S) 139V(S) 141G(T) 143V 150R(K) 152A 153G 154H(M) 155H 183A(K) 185Q 187V(Y) 193F(V) (identity: 47.3 %/46.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7y9b_B_1 identity=46.2% |
queryA 15:KLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRIN---WITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWS: 111
: * ** ** ** * * * * ** ****** * *** * * ** * * ** *** * *** ** * **:
7y9b_B_1 15:RLVKDWNFTWSVVFLLITIVLQYGYPSRSMFVYVIKMFVLWLLWPASMALSIFCAVYPIDLASQIISGILAATSCA---MWISYFVQSIRLFMRTGSWWS: 111
SecStr :HHHHHHHHHHHHHHHHHHHHHHH STTT HHHHHHHHHHHHHHHHHHHHHHHHHHHS SSHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH GGG:
ExpBur :eeeeeeeeeeeeeeeeeeebeeebeeeeeeebbeebbebeeeebeeeeeebeeeeeeeeeeeeeeebeeebeebee---eeeebeeebeebeeebebeeb:
Contact : bbbbb bb bb bbb bbb b bb b b bb b b bb bbb b bb b b b b b
queryA 112:FNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRY: 199
:**** * ***** ** *** * ** * * ** * * ** ** * *** * * * ** * * **:
7y9b_B_1 112:FNPESNCLLNVPIGGTTVVRPLVEDSTSVTAVVTDGYLKMAGMHFGACDFQRLPSEVTVAKPNVLIALKMIKRQAYGTNSGVAIYHRY: 199
SecStr :G TT EEEEEEETTEEEEEEESS SEEEEEEETTEEEETTEEEEE STT SEEEEEETTEEEEEEEEEEEESSSS EEEEEEE :
ExpBur :bbeebebbbbbeeeeeeebeebeeeeeebebebeebebebeebebeebebeebbeebebbebeeebebebeeeeeeeeeebbbebeee:
Contact : bb b b bb b b b b b bbbb b b b b
|
[assembly_id:1]
[help]