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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NCAP_SARS) | A 1 (A) | polymer(polypeptide(L)) [133 aa] | Nucleoprotein :Q6SA23_CVHOC | |
2 | b | B 1 (A) | non-polymer(U5P) | URIDINE-5'-MONOPHOSPHATE | 52S 54F 55T(S) 56A(G) 108R 110Y 112Y 150R 157A 175E (identity: 80.0 %/48.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4lm7_A_1 identity=48.0% |
queryA 52:SWFTALTQHGK-EELRFPRGQGVPINTNSGPDDQIGYYRRATRR-VRGGDGKMKELSPRWYFYYLGTGPEASLPYGANKEGIVWVATEGA-LNTPKDHIG: 148 :*** ** * * * ****** ** * ** ** * ************ * ** * *** * *** * * : 4lm7_A_1 9:SWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGXXXQLLPRWYFYYLGTGPHAKDQYGTDIDGVYWVASNQADVNTPAD-IV: 107 SecStr : SB EEE STT TT TT GGG EEEEEEE S --- EEEEEETT GGGTTS TT TTEEEEE TT TTS S- : ExpBur :bbbbbbbbeeeeeebebeeeebbbebeeeeeebbbbbbeebeeeeeeeeee---eeebebbbbbbebbebeeeebeeeeebbebbbbeebeeeeebe-ee: Contact :b bbb b b b queryA 149:TRNPNNNAATVLQLPQGTTLPKGFYAEGS: 177 : * * * * ** ** * * ***: 4lm7_A_1 108:DRDPSSDEAIPTRFPPGTVLPQGYYIEGS: 136 SecStr : TTTS B TT TTEEETT : ExpBur :ebeeeeeeeeebebeeebeebebbebeee: Contact : b b b |