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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(IL6RB_HUMAN) | D 1 (B) | polymer(polypeptide(L)) [398 aa] | Leukemia inhibitory factor receptor :LIFR_HUMAN | |
2 | b | B 1 (D) | polymer(polypeptide(L)) [174 aa] | Ciliary neurotrophic factor :CNTF_HUMAN | 34E(Q) 35S(D) 59H 84R(S) 85T(S) 86A(G) 88S(N) 90T(V) 113Q(D) 115V(I) 119T(V) 121I(F) (identity: 8.3 %/29.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8d74_D_1 identity=29.5% |
queryA 31:ISPESPVVQLHSNFTAVCVLKEKCMDYF--HVNANYIVWKTNHFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPEK: 128 : * * * * ** ** * * * * * ** * * * * * ** : 8d74_D_1 210:VFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTT------------------EDNIFGTVIFAGYPPDT: 291 SecStr :EE SSEEEETT EEEEE SS EEEEESSS B EE SSS EEEEE S SS EEEEEEE------------------SS EEEEEEEEE : ExpBur :bbeeeeebeeeeebbbbbbbeeebeebebeeeebeeeebeeebbbbebeebeebeeebeebebeb------------------eeeeeebebbbbeebbe: Contact : bb b bbb b b b b b b queryA 129:PKNLSCIVNEGKKMRCEWDGGRETHL----ETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVW---VEAENALGKVTSDHINFDPVYKVK: 221 :* * * * * * ** * * * ** * * * * * * ** * * ** : 8d74_D_1 292:PQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAXXXXNESYQLLFQML--PNQEIYNFTLNAHNPLGRSQST-ILVNITEKVY: 388 SecStr : EEEEEEBSSTTEEEEEEE S S STTS EEEEEESSS EEE ---- EEEEEE --TT EEEEEEEEE SS EEEEE-EEEEGGG B : ExpBur :beebebebeeeeebbbebeeeeebebeeeeebbbbbebeeeeeeeebeee----eeeeebebebe--eebeebebbbebebeeeebeee-eebebeeebe: Contact : bb queryA 222:PNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTV--QDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASG: 319 :* * * * ** * * * * * * * ** * * * * * ***** * ** ** : 8d74_D_1 389:PHTPTSFKVKDIN--STAVKLSWHLPGNFAKINFLCEIEIK-KSNSVQEQRNVTIKGVENSSYLVALDKLNPYTLYTFRIRCSTETF-WKWSKWSNKKQH: 484 SecStr : EEEE S--SSS EEE S SSS EEEEEEEE- SSS EEEEEEEE SSB S SS B BSSS- : ExpBur :bebbeebebeeee--eebbebebebeeebeeeebebbbbbe-eeeeeeeeeeeebeeeeeeebebebeeeeeeeebbbebebbbeee-eeebeebeebee: queryA 320:ITYE: 323 : * *: 8d74_D_1 485:LTTE: 488 SecStr : : ExpBur :beee: |