#WARNING:no index is registered index "YP_009725310.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725310.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [222 aa] | endoribonuclease :E3V2B6_PRRSV | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [205 aa] | endoribonuclease :E3V2B6_PRRSV | 242H(G) 243S(T) 255A(Y) 265L 266E(P) 267D(R) 280I(V) 281T(G) 282D(V) 283A(S) 285T(P) 286G 287S(A) 288S(A) 289K 290C(A) (identity: 18.8 %/30.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5da1_A_1 identity=30.1% |
queryA 148:VKGLQPSVGPKQASLNGVTLIGEAV----KTQFNYY--KKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFS: 241 :* * * * * * ** * * * * **** * * * * * * * * ** : 5da1_A_1 51:VASLRPIHKYSRACIGAGYMVGPSVFLGTPGVVSYYLTKFVRGEAQVLPETVFSTGR----------IEVDCREYLDD----RERVVAESLPHAFIGDVK: 136 SecStr :EEESS SSS EEEET EEETTEEE BTTBEEEEEEEEETTEEE B SH----------HHHT S SSH----HHHHHHHHSHHHHT EEE: ExpBur :bbbeeeeeeebebbebbbebeeeeeeebeeeeebbebbebeeeebeebeebbbbbbb----------beeebeeeeee----ebeebbeebeebbebeee: queryA 242:HSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTG-SSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKVTIDYTEISFMLW: 332 : ** * * * * * * * ** * * * * ** * * * *: 5da1_A_1 137:GTTVGGCHHVTSKY---------LPRFLPKESVA---VVGVSSPGKAAKAVCTLTDVYLPDLEAYLHPE---TQSRCWKVMLDFKEVRLMVW: 213 SecStr :TTEEE BTT TT--------- S SSSSE---EEEEEETTTEEEEEEEEB GGGGGGGS S---SS EEEEEEETTEEEEEEEE: ExpBur :eeebebbbbbbbee---------beeebeeebbb---ebebebeeebebeebbbbbbbbbebeeebebe---eeeeeeebebbbeebebbbe: Contact :bb b bbb bbbb bb bbbb |