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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(NCAP_SARS2) | D 1 (D) | polymer(polypeptide(L)) [112 aa] | Nucleoprotein :A0A2I2MQD0_9BETC | |
2 | b | C 1 (B) | polymer(polypeptide(L)) [130 aa] | Nucleoprotein :A0A2I2MQD0_9BETC | 52W 53F(Y) 75N 77N 78S 112Y 144D(T) 146I(F) 148T 150N 153N 154N(D) (identity: 66.7 %/55.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6lz8_D_1 identity=55.2% |
queryA 49:TASWFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDGIIWVATEGALNTPKDHIGT: 148 :* ** * ****** * ** ***** * ** * ** ** ******* ****** ** * **** ** ** * **: 6lz8_D_1 5:TVSWYTGLTQHGKVPLTFPPGQGVPLNANSTPAQNAGYWRRQXXXXXXXX-XXXXXAPRWYFYYTGTGPEAALPFRAVKDGIVWVHEDGATDAPST-FGT: 102 SecStr : SB EEE SS TT TTS GGG EEEEEE -------------- EEEEEETT GGGTTS TT TTEEEEE TT SS S- : ExpBur :eebebbbbbbeeeeebebeeeebbbeeeebeeeebbbbbeee--------------eeebebbbbebeebeebebebeeebbbbbeeeebeeeebe-eee: Contact : bb b bb b b b b queryA 149:RNPANNAAIVLQLPQGTTLPKGFYAEG: 175 :*** * *** * ** *** * **: 6lz8_D_1 103:RNPNNDSAIVTQFAPGTKLPKNFHIEG: 129 SecStr : TTT B TT TTEEE : ExpBur :beeeeeeeeebebeeeeebbeebeeee: Contact : b bb |