[pdbjlvh2]Protein Model on 8sqk_A_1_G

#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein. [pdbjlvh2]Protein Model on 8sqk_A_1_G_1

Protein Model on 8sqk_A_1_G_1 (TEMPLATE: 8sqk )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(queryA)	A 1 (A)	polymer(polypeptide(L)) [929 aa]	RNA-directed RNA polymerase nsp12 :R1AB_SARS2
2	b		G 1 (T)	polymer(polyribonucleotide)	Template RNA	408Q 496N 500K 501S 507N 541Q 543N 557V 559G 569R 577K 590G 592S 594F 595Y 682S 683G 684D 685A 689Y 914R 915Y 924M (identity: 100.0 %/100.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8sqk_A_1 identity=100.0%

queryA         1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100
                :****************************************************************************************************:
8sqk_A_1       1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100
SecStr          :  HHHHHHHHHHTTS   EEESS SSS   EEEEEEEESSS EEEEEEEE S EEEEEEETTTEEEEEEEEEEE  HHHHHHHHHHHHHHTTSTTB  EE:    
ExpBur          :eeeeeebbeebeeeeebebeeebebeeebebebbbbeeeeebbbbbebeeeebbbbbbbeeeeeeebbbbbbbebeeeebeebeebbeebeebebbbebb:    

queryA       101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200
                :****************************************************************************************************:
8sqk_A_1     101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200
SecStr          :EEEEEETTEEEEEEEEEEE SSBHHHHHHHHHS  TT  HHHHHHHHHTTSS TTGGGSS SS TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHT:    
ExpBur          :bbebebeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebeebeebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbeebbebbebbeebb:    

queryA       201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300
                :****************************************************************************************************:
8sqk_A_1     201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300
SecStr          :EEEE  GGGBBSS  B   SS EE STT  EEE SHHHHHHHHHHHHTTTTGGGSBGGG TTS B    TT    HHHHHHHHHHHSTT  S   SSGGG:    
ExpBur          :bebebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeeeeeeeeebeebbeebbeebbebbebebbbbbee:    

queryA       301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400
                :****************************************************************************************************:
8sqk_A_1     301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400
SecStr          :  SHHHHHHHHHHHHHHGGGS GGG EEEEEEEEETTEEEEEEEEEEETTTEEEE S    SB    HHHHHHHHHSSHHHHHTSEE   TT  S EEEE:    
ExpBur          :beebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeeeeebbbebbbbeebeeeeebebeebebebebb:    

queryA       401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500
                :****************************************************************************************************:
8sqk_A_1     401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500
SecStr          :SSSS     B   EE HHHHHHHHHTT S TT S     B   B TTHHHHHHGGGGG       HHHHHHHHHHHTTSS S       TTS   S SSS:    
ExpBur          :eeeeeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeebebebbbebbbebebbeebbbbbbbbbbbbbbbebbbeebebbebebeebebeeeee:    
Contact         :       b                                                                                       b   b

queryA       501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600
                :****************************************************************************************************:
8sqk_A_1     501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600
SecStr          :   TTGGGT  HHHHHHSS HHHHHHHHHHTTSS    EEEEEE    BSSS   EEEE  HHHHHHHHHHHHHHHHHHTS SSSSB TT  STTTHHHH:    
ExpBur          :ebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbeeebeebbbbe:    
Contact         :b     b                                 b b             b b         b       b            b b bb     

queryA       601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700
                :****************************************************************************************************:
8sqk_A_1     601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700
SecStr          :HHHHHHTT SSEEEEE   TTHHHH  HHHHHHHHHHHGGG TTT  HHHHHHHHHHHHHHTTS EEESSSEEEE  SS  TTSTTHHHHHHHHHHHHHH:    
ExpBur          :bbeebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbeebbbebebbbbeebebbebbbbbbbbbbbb:    
Contact         :                                                                                 bbbb   b           

queryA       701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800
                :****************************************************************************************************:
8sqk_A_1     701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800
SecStr          :HHHHHHHHTS SSS  SSHHHHHHHHHHHHHHT  S  HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHTTTSS  HHHHHHHHHHSSS    TTS E:    
ExpBur          :bbbbbbbbbbebeebeeeebeebbbebbbbbbeeeeebeebbeebbebbeebbbbbbebeebbbbbbbebbeeebbbeeebbbbbbbbbbbbbbeeeebb:    

queryA       801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900
                :****************************************************************************************************:
8sqk_A_1     801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900
SecStr          :EES TTS  S BTTBEEEEEE SSSEEEEEE  HHHHHHHHHEESSGGGG GGG SHHHHHHHHHHGGGGG SSTTTHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeeeeebbeebeeeebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbebbeebbebbbebbbbeebeeeeebebbebbbebbeebbeeeeeeee:    

queryA       901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
                :*****************************:
8sqk_A_1     901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929
SecStr          :HHSS       GGGTTSTHHHHGGGSTT :    
ExpBur          :eeeeeeeeeeeeeeebeeebbeebbeeee:    
Contact         :             bb        b

Protein Model on 8sqk_A_1_G_1 (TEMPLATE: 8sqk )

Input Residue Numbers for Focused Sites