#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 272K 273Y 274D 324T 326F 328P 330V 331R 340F 341V 365R 368F 371L 372L 380M 382A 383A 384S 386N 387L 388L 389L 391K 392R 403N 405V 407F 509W 514L 517D 518S 523D (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwn_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 8gwn_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHS SS B SS SSS EE SSS EE B GGG S B SHHHHHHHHHHHHHTT SSS B: ExpBur :eeebbeebbeeeeebbeeebeeeeeeeeebbbbeeeeebbbbbebeeeebbbbbbbeeeeeeeebbbbbbbeeeeebeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 8gwn_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr : SSSS BB S SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGTSS SS SSS TTHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTEEE: ExpBur :eeeeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbeebeebeebbeebbeebbebbbebbebbeebeeebbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 8gwn_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E TTSSBSSS S EE TT EEE SHHHHHHTTHHHHS TTGGGSBTTS TTS B TT SSHHHHHHHHS SS SSGGG SS: ExpBur :ebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbebeeeeeeeeeeeeeeeeeebeebbeebbeebbebbeeebbbebeebee: Contact : bbbbb queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 8gwn_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :SHHHHHHHHHHHHTTTSS SSS EE EEEETTEEEE EEE SSS EEE S S S SHHHHHHHS HHHHHHSS SS SS SS: ExpBur :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeebbebbeebbbbeeeeeeeeeebeebebebebbeee: Contact : b b b bb bb b b bb b bbb bbbb bb b queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 8gwn_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B EE HHHHHHHHHTT TT S B B STTHHHHHGGGGG STTHHHHHHHHHHHTTS TTT S S S : ExpBur :eeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeebeeebebebbbebebbeebbbbbbbbbbbbbbbbbbbeebeebebebeebeeeeeeeebb: Contact : b b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 8gwn_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :GGGTTT HHHHHHSS HHHHHHHHTTTTSS B EE BS S EE B HHHHHHHHHHHHHHHHHHTT SSSB TT STTTTHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebeeeeebbeeeebbbebebbbbbbbbbebbbbebbebbeeeeeebbbbeeebeeebbeebbe: Contact : b b bb b queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 8gwn_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHTSS SS SSTTTS HHHHHHHHHHHT S SSSS SHHHHHHHHHHHHHHSS SSS SS TTSSSHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbebeebbbbbbbbbbbbbbbbbbeebeeebeeeeebbbbbbbbbbbbebbbbbebbbbbbebbbbeebbbeebbbbbbbbbbbbbbb: queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 8gwn_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHSS TTT SSHHHHHHHHHHHHTS SS HHHHHHHHHHHHHS EESSS EE STTTTSSSS SHHHHHHHHHHH TTS S: ExpBur :bbbbbebebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebe: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 8gwn_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : SSS S SSS B EETTEE B HHHHHHHHHEESSTTTS SGGGHHHHHHHHHHT TTTT SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eeeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeebebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeeeeeeeeeee: queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 8gwn_A_1 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :S S TTTTSHHHHTGGGSS : ExpBur :eeeeeeeebeeebeeeebeebbeeee: |