#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [931 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [190 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 273Y 324T 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 379A 380M 381H 384S 386N 387L 388L 389L 390D 391K 392R 398V 402T 403N 404N 407F 509W 514L 518S 523D 666M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwe_A_1 identity=100.0% |
queryA 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 :****************************************************************************************************: 8gwe_A_1 1:SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHD: 100 SecStr : THHHHHHHHS SS EEESS SSS EEEEEEEESSS EEEEEEEE S EEEEE TTS S EEEEEE HHHHHHHHHHHHHHTT TTB EE: ExpBur :eeeeeebbeebbeeeebebeeeeeeeeeeeeebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebb: queryA 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 :****************************************************************************************************: 8gwe_A_1 101:FFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAG: 200 SecStr :EEEEESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSSSSS SSS TTHHHHHTTSHHHHHHHHHHHHHHHHHHHHHT: ExpBur :bbebeeeeeeebbbbbbebbebbbbbbbbbbbebeeeebeebeebbeebebbeeebbeeeebbbbbeeeebeebbeebbeebbebbeebbebbebbeeeb: queryA 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 :****************************************************************************************************: 8gwe_A_1 201:IVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN: 300 SecStr :EEEE GGGBBTT B TT EE TT EEE HHHHHHHTTHHHHTTTTGGGGBTTS TTS B TT HHHHHHHHHHH TT S SSGGG: ExpBur :bebebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebeeebeebbeebbebbeeebbbebee: Contact : bb b queryA 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 :****************************************************************************************************: 8gwe_A_1 301:CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAA: 400 SecStr : SSHHHHHHHHHHHHHHTTSS GGG EEEEEEEEETTEEEEEEEEEEETTTEEEE S SEESS HHHHHHHHH HHHHHHTSEE S SS EEEE: ExpBur :beeebbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeeeeebbeebbbbeeeeeeeebebeebebebebb: Contact : b b bbbbb bbbb b b b bbb b bbbbbbb b queryA 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 :****************************************************************************************************: 8gwe_A_1 401:LTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK: 500 SecStr :SSSS B EE HHHHHHHHTTT S TT S B B STTHHHHHGGGGG HHHHHHHHHHHHHHS S TTS S S: ExpBur :eeeeeeeeebeeeeebeebeebbeeeebeeeeeebeeebebeeeeeebebebbbebebbeebbbbbbbbbbbbbbbeebbeebeebebebeebeeeeeee: Contact : bbb b queryA 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 :****************************************************************************************************: 8gwe_A_1 501:SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN: 600 SecStr : TTGGGT HHHHHHHS HHHHHHHHHHTTT EEEEEE BSS S EEEE HHHHHHHHHHHHHHHHHHTT SSSSB TT STTTHHHH: ExpBur :ebbbbbeeeeebeebbeebeeeebeebbeebbebbbbbbbebebeeebbeeeebebebebbbbbbbbbebbbbebbebbeeeeeebbbbeeeeebbbbee: Contact : b b b b queryA 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 :****************************************************************************************************: 8gwe_A_1 601:MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAV: 700 SecStr :HHHHHHTT SSEEEEE TTTTTS HHHHHHHHHHHGGG TTTS HHHHHHHHHHHHHHHTS EEEETTEEEE SS TTSTTHHHHHHHHHHHHHH: ExpBur :bbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbebeeebeeeeebbbbbbbbbbbbebbbbbebbbbebebbbbeebebeebbbbbbbbbbbb: Contact : b queryA 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 :****************************************************************************************************: 8gwe_A_1 701:TANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCW: 800 SecStr :HHHHHHHHTS TTS HHHHHHHHHHHHHHHS S HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTS E: ExpBur :bbbbbbbbbeebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeeeebbbbbbeebbeeebbbeeebbbbbbbbbbbbbbeeeebb: queryA 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 :****************************************************************************************************: 8gwe_A_1 801:TETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML: 900 SecStr :EE TTS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSGGGSSGGG HHHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeeeeeebbeebeebebbebebeeeebbbbbbebbebbbbbbebeeeeeeebbeebeebbebbbebbbbeeeeeeebbebbebbbebbeebbeeeeeeee: queryA 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHTVL: 931 :*******************************: 8gwe_A_1 901:DMYSVMLTNDNTSRYWEPEFYEAMYTPHTVL: 931 SecStr :HHS TTTGGGGSTHHHHGGGSS : ExpBur :eeeeeeeeeeeeeeebeeeebeebbeeeeee: |