#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [926 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 272K 273Y 274D 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 367S 368F 371L 372L 374Y 378P 379A 380M 381H 382A 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 398V 400A 402T 403N 404N 405V 407F 447N 509W 514L 517D 518S 523D 666M 675V (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gwb_A_1 identity=100.0% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 8gwb_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHHS SS EEESSSSSS EEEEE EETTEES EEEEE S EEEEEEETTTEEEEEEEEEEE HHHHHHHHHHHHHHTT TTS EEEEEE: ExpBur :eeebeeebbeeebeebeeeeeeeebbebebbbbeeeeebbbbbbbeeeebbbbbbbeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 8gwb_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr :EESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTS HHHHHSTTSS SSS THHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTEEE: ExpBur :beeeeeebbbbbbbebbebbbbbbbbbbbbbebeebebbbebbeebebbeeebbeeeebbbbbebeebbebbbebbeebbebbbebbebbebbeebbbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 8gwb_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E GGGBBTTS B TT EE STT EE SHHHHHHHHHHHHTTGGGGGSSTTS TTS TT HHHHHHHHHHH TT S SSGGG SS: ExpBur :ebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeebeeeeeeeebeeeeeebbebbeebbeebbebbebebbbbbeebee: Contact : bbbbb queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 8gwb_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :HHHHHHHHHHHHHHHTTS GGG EEEEEEEEETTEEEEEEEEEEETTTEEEE SS SEES SHHHHHHHH HHHHHHTSEE TT SS EEEESSS: ExpBur :bbbbbbbbbbbbbbbebbeeebbbbbeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeeeeebbbbbbbbebeeebeebebeebebebbbbeee: Contact : bbbb bbbbb bbbb bb bb b bbbbbbb bbbbbbb b b b bb queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 8gwb_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B EE HHHHHHHHHTT S TT S B B GGGHHHHHGGGGG HHHHHHHHHHHHHHT S GGG S TTS : ExpBur :eeeeeebeeeeebeebeebbeeeebbeeebebebebebeebeeebbbebbbebebbbebbbbbbbbbbbbbbbbbbbeebebbebebeebebeeeeeebb: Contact :bb b b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 8gwb_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :BTGGGT HHHHHHSS HHHHHHHHHHTTTS EEEEEE BS S EEEE HHHHHHHHHHHHHHHHHHTT SSSSB TT STTTHHHHHHH: ExpBur :bbbeeebebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebbbebbbbbbbbbbbbbbbbebbebbeeeeebbbbbebeeeebbbbebbe: Contact : b b bb b queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 8gwb_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHTSS SSEEEE TTHHHH HHHHHHHHHHHTTT SSSS HHHHHHHHHHHHHHHTS EE TTEEEE SS TTSTTHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbbbbb: Contact : b b queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 8gwb_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHTS TTS HHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEESSS EEEEEEHHHHHTTSS SHHHHHHHHHHTSS GGG EE : ExpBur :bbbbbbbbbeebeeeebeebbbebbebbbeeeeeeeebbebbbebbeebbbbbbeeeebbbbbbbebbeebbbbebebbbbbbbbbbbbbbeeeebbeee: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 8gwb_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : SSS S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSGGGGSTTT HHHHHHHHHHHGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :ebeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeebeebbeebebbbebbbebbbbeebeeeebbebbebbbebbebbbeeeeeeeeeee: queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :**************************: 8gwb_A_1 904:SVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :SS TTTTSHHHHHGGGSS : ExpBur :eeeeeeeeeeeebeeeebeebbeeee: |