#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [928 aa] | Replicase polyprotein 1ab :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [187 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 272K 273Y 324T 325S 326F 328P 329L 330V 331R 332K 336D 338V 339P 340F 368F 371L 372L 375A 379A 380M 381H 383A 384S 386N 387L 388L 389L 390D 391K 392R 396F 403N 407F 509W 514L 517D 518S 666M (identity: 100.0 %/99.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8gw1_A_1 identity=99.9% |
queryA 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 :****************************************************************************************************: 8gw1_A_1 4:AQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFK: 103 SecStr : HHHHHHT SS EEESS SSS EEEE BTTB EEEE S EEEEEEETTTEEEEEEEEEE SHHHHHHHHHHHHHTT TTS EEE: ExpBur :eeebbeebbeeeeeebbeeeeeeeeeeeebbbbeeeeebbbbbebeeeebbbbbbeeeeeeeeebbbbbbeeeeeebeebeebbeebeebebbbebebbe: queryA 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 :****************************************************************************************************: 8gw1_A_1 104:FRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVG: 203 SecStr :EESSSSEEEEEE S SSBHHHHHHHHHS TTS HHHHHHHHHTTSS GGGGGSSS S SSS TTHHHHHGGGHHHHHHHHHHHHHHHHHHHHHTEEE: ExpBur :eeeeeeebbbbbbbebbebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebbbbeebeebeebbbebbeebbebbbebbebbebbeeebbeb: queryA 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 :****************************************************************************************************: 8gw1_A_1 204:VLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLD: 303 SecStr :E STT BTTS S EE TT EEE HHHHHHHTTHHHHS TTGGGSBTTS TTS B SS HHHHHHHHHHHSTT S SSGGG SS: ExpBur :ebbbbbbbbebbbbebbebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbeebeeebbbbbeebee: Contact : bbbb queryA 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 :****************************************************************************************************: 8gw1_A_1 304:DRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTN: 403 SecStr :HHHHHHHHHHHHHHTSSS TTS S EEEEEETTEEEEEE EEE SSS EEE S SSB HHHHHHHHS HHHHHTTSEE SS SS EEEESSS: ExpBur :bbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeeeeebeeebebbbebbbbebbeeeeebebeebebebebbeee: Contact : bbb bbbbb b bbb b bb b bbb bb bbbbbbb b b queryA 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 :****************************************************************************************************: 8gw1_A_1 404:NVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAG: 503 SecStr :S B B EE HHHHHHHHHTT S TT S B B SB SHHHHGGGGG HHHHHHHHHHHHHTT S GGG S S S : ExpBur :eeeeeebeeeeebeebeebbeeeebbeeebebeeebebeeeeeebbbebbbebeebeebbbbbbbbbbbbbbbbbbbeebeebebebeebeeeeeeeebb: Contact : b queryA 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 :****************************************************************************************************: 8gw1_A_1 504:FPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLK: 603 SecStr :TTGGGT HHHHHHHS TTHHHHHHHHGGG EEEEEE BSSS EEEE HHHHHHHHHHHHHHHHHHTT SSSSB TT STTTHHHHHHH: ExpBur :bbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebeeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbeeeeeeebbeebbe: Contact : b b bb queryA 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 :****************************************************************************************************: 8gw1_A_1 604:TVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTAN: 703 SecStr :HHTSS SSEEEEEE TTTTTS HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHHTS EEEETTEEE SS TTSTTHHHHHHHHHHHHHHHHH: ExpBur :ebbeebeeeebbbbebeebbbbbbbbbbbbbbbbbbbebeeebeeeeebbbbbbbbbbbbbbbbbbebbbbbbebbbbeebebbebbbbbbbbbbbbbbb: Contact : b queryA 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 :****************************************************************************************************: 8gw1_A_1 704:VNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTET: 803 SecStr :HHHHHTS TTS HHHHHHHHHHHHHHTS S HHHHHHHHHHHHHHEEEEESSS EEEEEEHHHHTTTSS HHHHHHHHHHHHS TTT EE : ExpBur :bbbbbbbebeebeeeebbebbbebbebbbeeeeeeeebbeebbebbeebbbbbbeebebbbbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebe: queryA 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 :****************************************************************************************************: 8gw1_A_1 804:DLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY: 903 SecStr : TTS S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESTTSSSSHHHH HHHHHHHHHTGGGGG SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eeeebbeebeebbbbebebeeeebbbbbbebbebbbbbbbbeeeebeebbeebeebbebbbebbbbeeeeeeebbebbebbbebbeebbeeeeeeeeeee: queryA 904:SVMLTNDNTSRYWEPEFYEAMYTPHTVL: 931 :****** *********************: 8gw1_A_1 904:SVMLTNNNTSRYWEPEFYEAMYTPHTVL: 931 SecStr :SS S TTTTSHHHHGGGGSS : ExpBur :eeeeeeeebeeeeeeeebeebbeeeeee: |