#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [814 aa] | Replicase polyprotein 1ab :R1AB_SARS2 | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [115 aa] | Non-structural protein 8 :R1AB_SARS2 | 270L 271L 272K 273Y 323P 324T 325S 326F 328P 329L 330V 331R 332K 338V 339P 340F 341V 344T 368F 371L 372L 374Y 375A 378P 379A 380M 382A 383A 384S 385G 386N 387L 388L 389L 390D 391K 392R 396F 398V 402T 403N 405V 407F 447N 509W 514L 515Y 518S 523D 666M (identity: 100.0 %/97.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ozv_A_1 identity=97.8% |
queryA 31:VYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQ-------------: 117 :******************** : 7ozv_A_1 31:VYRAFDIYNDKVAGFAKFLK-------------------------------------------------------------------XXXXXXXXXXXXX: 63 SecStr : EEEEEEE SS EEEEEEE --------------------------------------------------------------------------------: ExpBur :eebbebeeeeebbbbbebee--------------------------------------------------------------------------------: queryA 118:------------------------------------------------------RLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163 : **********************************************: 7ozv_A_1 64:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWY: 163 SecStr :------------------------------------------------------ SSBHHHHHHHHHS TTS HHHHHHHHHTTS GGGGSSTTSS: ExpBur :------------------------------------------------------eebebbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeeebb: queryA 164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263 :****************************************************************************************************: 7ozv_A_1 164:DFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTK: 263 SecStr : TTT TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTEE B GGGBBTTS B S EE STT B HHHHHHHHHHHHHTTTTGGGGBTTS SSS: ExpBur :bbbebeebbebbeebbeebbebbeebbebbeebeeebbebbbbbbbbbbebebebeeeeeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeee: queryA 264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHS: 363 :************************************************************************************************** : 7ozv_A_1 264:PYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLXX: 363 SecStr : B TT HHHHHHHHHHHSSS S SSTTS SHHHHHHHHHHHHHHTTTS TTTSB EEEEEETTEEEEEE EEEETTTEEEE S --: ExpBur :eeeeeeeeeeebbebbeebbeebbebbebebbbbbeebeebbbbbbbbbbbbbbbebbeeebbbebeeebeeeeeeeebbbbbbbebbbbbebeeeee--: Contact : bbbb bbbb bbbbb bbbb b queryA 364:SRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463 : *************************************************************************************************: 7ozv_A_1 364:XXXSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTM: 463 SecStr :--- HHHHHHHHHSHHHHHHHSEE SS SS EEEESSSS B EE HHHHHHHHHTT S TT S B B TTHHHHHHGGGGG : ExpBur :---eeeeebbbebbbbebeeeeeebebeebebebebbeeeeeeeeebeeeeebeebeebbeeeebbeeeeebeeebebeebeeebbbebbbbbebbbebb: Contact : b bb bb bbb bbbbbbbbbbb b b bb b b b queryA 464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563 :****************************************************************************************************: 7ozv_A_1 464:CDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSIC: 563 SecStr : HHHHHHHHHHHHGGGTT GGG S SSS BTGGGT HHHHHHHS HHHHHHHHHHHTTS EEEEEE S BSSS EEEE HH: ExpBur :bbbbbbbbbbbbbbebbeebeebbbebeebeeeeeeeebbbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbbbebeeebeeeeebebebbbbbb: Contact : b bb b b queryA 564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663 :****************************************************************************************************: 7ozv_A_1 564:STMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVL: 663 SecStr :HHHHHHHHHHHHHHHHHT SSSB TT STTTHHHHHHHHHHTT SSEEEEEE TTHHHH HHHHHHHHHHHHTT TTTS HHHHHHHHHHHHHHTT: ExpBur :bbbbbebbbbebbebbeeeeebbbbbebeeeebbbbebbeebbeebeeeebbbbebeebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbb: queryA 664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763 :****************************************************************************************************: 7ozv_A_1 664:SEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAV: 763 SecStr :S EEEETTEEEE SS TTSTTHHHHHHHHHHHHHHHHHHHHHHSS STT HHHHHHHHHHHHHHHT S HHHHHHHHHHHHHHEEEEEETTEEE: ExpBur :bbbbbbebbbbebebbbbeebebbebbbbbbbbbbbbbbbbbbbbbbebeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebb: Contact : b queryA 764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863 :****************************************************************************************************: 7ozv_A_1 764:VCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLA: 863 SecStr :EEEEHHHHHHTSS HHHHHHHHHHTS TTS EEES TTT S BTTEEEEEEEETTEEEEEEEE HHHHHHHHHEESSGGGGSSSHHHHHHHHHH: ExpBur :bbbbeebbeeebbbebebbbbbbbbbbbbbbeeeebbebeeeeebbeebeebebbebeeeeeebbbbbbebbebbbbbbbbeeeeebeeeebbeebbebb: queryA 864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :********************************* ********************: 7ozv_A_1 864:IDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTXXXXXXXXXXXXXDNTSRYWEPEFYEAMYTPHT: 929 SecStr :STTSGGGGSSSHHHHHHHHHHHHHHHHHHHHH ------------- SGGGSSHHHHHTTSSTT : ExpBur :bbbbbbeebeeeebbebbebbbebbeebeeeee-------------eeeeeeeeeebbeebbeeee: |